Query psy4233
Match_columns 303
No_of_seqs 129 out of 1412
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 20:13:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4233.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4233hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1087 GalE UDP-glucose 4-epi 100.0 7.6E-41 1.6E-45 275.0 23.8 269 19-293 1-306 (329)
2 COG1088 RfbB dTDP-D-glucose 4, 100.0 1.7E-40 3.7E-45 271.6 22.9 243 19-263 1-267 (340)
3 PRK15181 Vi polysaccharide bio 100.0 1.9E-39 4.1E-44 287.5 27.9 244 16-260 13-284 (348)
4 KOG2865|consensus 100.0 4.2E-39 9.2E-44 261.2 21.6 286 4-303 47-334 (391)
5 PF01073 3Beta_HSD: 3-beta hyd 100.0 1.8E-38 4E-43 271.4 24.5 238 22-263 1-273 (280)
6 PLN02166 dTDP-glucose 4,6-dehy 100.0 3.5E-37 7.6E-42 278.5 27.1 266 18-293 120-409 (436)
7 PLN02695 GDP-D-mannose-3',5'-e 100.0 8.3E-37 1.8E-41 272.2 28.4 266 17-293 20-315 (370)
8 PLN02572 UDP-sulfoquinovose sy 100.0 7.8E-37 1.7E-41 277.4 27.6 251 11-263 40-365 (442)
9 PLN02427 UDP-apiose/xylose syn 100.0 9.6E-37 2.1E-41 274.1 27.2 245 14-260 10-308 (386)
10 PRK10217 dTDP-glucose 4,6-dehy 100.0 3.9E-36 8.4E-41 267.4 28.4 242 18-261 1-273 (355)
11 PLN02206 UDP-glucuronate decar 100.0 4E-36 8.8E-41 272.1 27.3 267 17-293 118-408 (442)
12 PRK11908 NAD-dependent epimera 100.0 5.8E-36 1.2E-40 265.4 25.8 239 18-262 1-275 (347)
13 CHL00194 ycf39 Ycf39; Provisio 100.0 4.4E-36 9.5E-41 262.8 23.9 227 19-264 1-227 (317)
14 PRK09987 dTDP-4-dehydrorhamnos 100.0 2.9E-35 6.2E-40 255.4 22.9 220 19-259 1-235 (299)
15 PRK08125 bifunctional UDP-gluc 100.0 8E-35 1.7E-39 277.1 27.0 239 17-261 314-588 (660)
16 PLN02260 probable rhamnose bio 100.0 7.5E-35 1.6E-39 278.5 26.5 245 16-262 4-273 (668)
17 TIGR02622 CDP_4_6_dhtase CDP-g 100.0 1.5E-34 3.2E-39 256.6 26.3 242 17-260 3-278 (349)
18 PRK10084 dTDP-glucose 4,6 dehy 100.0 1.6E-34 3.4E-39 256.8 25.8 241 19-261 1-280 (352)
19 PLN02240 UDP-glucose 4-epimera 100.0 2.4E-34 5.3E-39 255.6 26.3 250 14-264 1-295 (352)
20 TIGR01181 dTDP_gluc_dehyt dTDP 100.0 3.4E-34 7.4E-39 250.8 26.4 242 20-263 1-265 (317)
21 PLN02214 cinnamoyl-CoA reducta 100.0 2.9E-34 6.4E-39 253.6 24.6 238 17-260 9-270 (342)
22 KOG1502|consensus 100.0 4.5E-34 9.7E-39 241.3 24.3 240 17-261 5-274 (327)
23 TIGR01472 gmd GDP-mannose 4,6- 100.0 3.5E-34 7.5E-39 253.6 24.8 241 19-262 1-273 (343)
24 PRK10675 UDP-galactose-4-epime 100.0 9.9E-34 2.1E-38 250.3 26.0 245 19-264 1-286 (338)
25 PLN02653 GDP-mannose 4,6-dehyd 100.0 2.6E-33 5.7E-38 247.8 27.2 243 16-261 4-278 (340)
26 COG0451 WcaG Nucleoside-diphos 100.0 1.2E-33 2.5E-38 247.2 24.4 236 19-263 1-261 (314)
27 PF01370 Epimerase: NAD depend 100.0 4.7E-34 1E-38 239.6 19.9 215 21-240 1-236 (236)
28 PLN02657 3,8-divinyl protochlo 100.0 1.8E-33 4E-38 251.8 23.8 235 16-264 58-302 (390)
29 PLN00198 anthocyanidin reducta 100.0 2.7E-33 5.8E-38 247.5 24.5 245 14-260 5-285 (338)
30 TIGR01214 rmlD dTDP-4-dehydror 100.0 3.5E-33 7.6E-38 241.3 23.9 219 20-263 1-233 (287)
31 PLN02662 cinnamyl-alcohol dehy 100.0 3.3E-33 7.1E-38 245.4 23.3 238 18-260 4-270 (322)
32 PLN02989 cinnamyl-alcohol dehy 100.0 8E-33 1.7E-37 243.2 25.6 238 17-260 4-272 (325)
33 PLN02650 dihydroflavonol-4-red 100.0 8.6E-33 1.9E-37 245.5 25.9 241 16-260 3-273 (351)
34 PLN02686 cinnamoyl-CoA reducta 100.0 3.6E-33 7.7E-38 248.6 23.3 243 14-264 49-329 (367)
35 PLN02896 cinnamyl-alcohol dehy 100.0 1.3E-32 2.9E-37 244.4 26.4 243 15-260 7-293 (353)
36 PLN02986 cinnamyl-alcohol dehy 100.0 8.8E-33 1.9E-37 242.6 23.7 236 18-260 5-271 (322)
37 PF04321 RmlD_sub_bind: RmlD s 100.0 1.4E-33 3E-38 242.6 17.9 220 19-263 1-236 (286)
38 PRK11150 rfaD ADP-L-glycero-D- 100.0 5E-33 1.1E-37 242.7 20.4 227 21-260 2-256 (308)
39 PLN02725 GDP-4-keto-6-deoxyman 100.0 3.5E-32 7.5E-37 237.2 25.0 222 22-264 1-255 (306)
40 TIGR03466 HpnA hopanoid-associ 100.0 7.6E-32 1.6E-36 237.2 27.1 235 19-263 1-252 (328)
41 TIGR03589 PseB UDP-N-acetylglu 100.0 3E-32 6.4E-37 239.1 24.1 231 16-260 2-246 (324)
42 KOG0747|consensus 100.0 1.3E-32 2.7E-37 223.6 19.9 244 18-263 6-272 (331)
43 PLN00016 RNA-binding protein; 100.0 2.3E-32 4.9E-37 244.8 23.4 230 17-264 51-297 (378)
44 TIGR01179 galE UDP-glucose-4-e 100.0 1.4E-31 2.9E-36 235.4 26.7 244 20-264 1-281 (328)
45 COG1091 RfbD dTDP-4-dehydrorha 100.0 7.7E-32 1.7E-36 224.6 23.1 218 19-263 1-231 (281)
46 KOG1429|consensus 100.0 7.1E-32 1.5E-36 219.2 22.0 268 16-293 25-316 (350)
47 PRK07201 short chain dehydroge 100.0 7.9E-32 1.7E-36 258.1 26.2 242 19-262 1-271 (657)
48 TIGR02197 heptose_epim ADP-L-g 100.0 1.3E-31 2.9E-36 234.4 24.7 233 21-263 1-264 (314)
49 KOG1430|consensus 100.0 2.2E-31 4.8E-36 229.4 23.8 245 16-263 2-272 (361)
50 PLN02996 fatty acyl-CoA reduct 100.0 1E-31 2.3E-36 246.4 23.0 246 16-262 9-361 (491)
51 TIGR01777 yfcH conserved hypot 100.0 1.8E-30 3.9E-35 224.8 23.6 239 21-282 1-256 (292)
52 KOG1371|consensus 100.0 2.6E-30 5.6E-35 215.0 21.0 246 18-264 2-289 (343)
53 COG1090 Predicted nucleoside-d 100.0 2.5E-30 5.5E-35 210.6 19.2 243 21-288 1-260 (297)
54 PLN02583 cinnamoyl-CoA reducta 100.0 6.3E-30 1.4E-34 221.8 22.9 234 17-260 5-265 (297)
55 TIGR01746 Thioester-redct thio 100.0 1.6E-29 3.4E-34 225.6 23.5 243 20-264 1-284 (367)
56 PRK05865 hypothetical protein; 100.0 2.1E-29 4.6E-34 239.9 24.8 200 19-258 1-202 (854)
57 PLN02778 3,5-epimerase/4-reduc 100.0 9.5E-29 2.1E-33 214.1 23.5 210 17-261 8-240 (298)
58 TIGR03649 ergot_EASG ergot alk 100.0 7.8E-29 1.7E-33 214.0 20.3 211 20-264 1-219 (285)
59 PF02719 Polysacc_synt_2: Poly 100.0 4.6E-29 1E-33 209.2 17.4 229 21-261 1-250 (293)
60 COG1086 Predicted nucleoside-d 100.0 8.9E-28 1.9E-32 213.7 23.2 233 16-260 248-497 (588)
61 PLN00141 Tic62-NAD(P)-related 100.0 2.6E-27 5.6E-32 200.7 21.8 224 16-256 15-250 (251)
62 PF13460 NAD_binding_10: NADH( 100.0 7.7E-27 1.7E-31 188.4 19.5 179 21-229 1-183 (183)
63 PLN02503 fatty acyl-CoA reduct 100.0 9E-27 2E-31 215.5 22.3 243 16-261 117-475 (605)
64 PRK12320 hypothetical protein; 99.9 4.2E-26 9.1E-31 213.4 22.7 200 19-257 1-202 (699)
65 PLN03209 translocon at the inn 99.9 1.3E-25 2.9E-30 204.3 20.4 231 16-256 78-322 (576)
66 PF07993 NAD_binding_4: Male s 99.9 5.3E-26 1.2E-30 192.2 16.2 200 23-223 1-249 (249)
67 PF05368 NmrA: NmrA-like famil 99.9 3.1E-26 6.8E-31 191.9 12.6 224 21-263 1-230 (233)
68 KOG1431|consensus 99.9 5.8E-25 1.3E-29 173.4 17.9 254 18-293 1-292 (315)
69 PLN02260 probable rhamnose bio 99.9 1.8E-24 3.9E-29 207.2 22.8 208 17-259 379-609 (668)
70 TIGR03443 alpha_am_amid L-amin 99.9 1.6E-24 3.4E-29 223.3 23.4 244 17-263 970-1267(1389)
71 COG1089 Gmd GDP-D-mannose dehy 99.9 5.1E-24 1.1E-28 173.7 19.7 243 18-263 2-273 (345)
72 COG3320 Putative dehydrogenase 99.9 2.1E-24 4.5E-29 184.2 14.0 234 19-256 1-289 (382)
73 PRK12825 fabG 3-ketoacyl-(acyl 99.9 3.7E-23 8.1E-28 174.6 20.8 216 15-245 3-248 (249)
74 PRK06482 short chain dehydroge 99.9 9E-24 1.9E-28 181.5 16.2 226 18-260 2-264 (276)
75 PRK13394 3-hydroxybutyrate deh 99.9 3.6E-23 7.7E-28 176.4 19.3 221 16-244 5-260 (262)
76 PRK05875 short chain dehydroge 99.9 9.9E-23 2.1E-27 175.1 20.5 234 15-261 4-273 (276)
77 COG0702 Predicted nucleoside-d 99.9 3.4E-22 7.3E-27 171.4 23.7 222 19-264 1-224 (275)
78 PRK07806 short chain dehydroge 99.9 6.6E-23 1.4E-27 173.3 18.8 220 16-245 4-245 (248)
79 PRK08263 short chain dehydroge 99.9 1.7E-23 3.7E-28 179.7 14.9 227 17-258 2-262 (275)
80 PRK12826 3-ketoacyl-(acyl-carr 99.9 1.9E-22 4.1E-27 170.7 20.0 216 16-244 4-248 (251)
81 PRK09135 pteridine reductase; 99.9 4E-22 8.6E-27 168.5 20.9 215 16-246 4-248 (249)
82 PRK12429 3-hydroxybutyrate deh 99.9 2.8E-22 6.1E-27 170.4 18.0 220 16-243 2-255 (258)
83 PRK05653 fabG 3-ketoacyl-(acyl 99.9 7.1E-22 1.5E-26 166.6 20.2 215 15-244 2-245 (246)
84 PRK07523 gluconate 5-dehydroge 99.9 6.1E-22 1.3E-26 168.2 18.3 218 16-246 8-254 (255)
85 PRK07074 short chain dehydroge 99.9 5.4E-22 1.2E-26 168.7 17.3 225 18-257 2-255 (257)
86 TIGR01963 PHB_DH 3-hydroxybuty 99.9 6.4E-22 1.4E-26 167.9 17.6 217 18-244 1-253 (255)
87 PRK07067 sorbitol dehydrogenas 99.9 4.6E-22 1E-26 169.1 16.7 223 16-246 4-257 (257)
88 PRK07774 short chain dehydroge 99.9 2.2E-21 4.8E-26 164.2 19.3 215 15-246 3-249 (250)
89 PRK12829 short chain dehydroge 99.9 4E-21 8.7E-26 163.9 20.7 220 16-244 9-262 (264)
90 PRK12823 benD 1,6-dihydroxycyc 99.9 3.3E-21 7.2E-26 164.1 20.1 212 16-243 6-258 (260)
91 PRK12828 short chain dehydroge 99.9 2.6E-21 5.6E-26 162.5 19.1 206 16-245 5-238 (239)
92 PRK06077 fabG 3-ketoacyl-(acyl 99.9 1.9E-21 4E-26 164.8 18.2 219 15-245 3-247 (252)
93 PRK07231 fabG 3-ketoacyl-(acyl 99.9 5.5E-21 1.2E-25 161.8 20.5 217 15-244 2-249 (251)
94 PRK12745 3-ketoacyl-(acyl-carr 99.9 8.7E-21 1.9E-25 161.1 21.0 213 18-245 2-253 (256)
95 PRK06914 short chain dehydroge 99.9 3.1E-21 6.6E-26 166.1 18.4 220 16-248 1-260 (280)
96 PRK12746 short chain dehydroge 99.9 1E-20 2.2E-25 160.5 20.9 214 16-242 4-251 (254)
97 PRK08063 enoyl-(acyl carrier p 99.9 4.7E-21 1E-25 162.2 18.2 216 16-244 2-247 (250)
98 PRK06180 short chain dehydroge 99.9 5.9E-21 1.3E-25 164.1 18.5 215 17-245 3-251 (277)
99 COG2910 Putative NADH-flavin r 99.9 1.1E-20 2.4E-25 144.9 17.5 202 19-240 1-210 (211)
100 PLN02253 xanthoxin dehydrogena 99.9 1.5E-20 3.3E-25 161.8 20.6 227 14-249 14-275 (280)
101 PRK06138 short chain dehydroge 99.9 5E-21 1.1E-25 162.2 17.2 218 16-242 3-248 (252)
102 PRK05557 fabG 3-ketoacyl-(acyl 99.9 2.2E-20 4.8E-25 157.6 20.7 214 15-243 2-245 (248)
103 PRK05876 short chain dehydroge 99.9 1E-20 2.2E-25 162.4 18.6 231 16-258 4-262 (275)
104 PRK06194 hypothetical protein; 99.9 1.1E-20 2.4E-25 163.3 19.0 215 15-260 3-252 (287)
105 PRK12935 acetoacetyl-CoA reduc 99.9 1.1E-20 2.5E-25 159.6 18.5 213 16-243 4-245 (247)
106 PRK12827 short chain dehydroge 99.9 1.8E-20 3.9E-25 158.4 19.5 210 16-242 4-247 (249)
107 PRK07775 short chain dehydroge 99.9 1.7E-20 3.6E-25 161.1 18.7 213 16-240 8-249 (274)
108 PRK07060 short chain dehydroge 99.9 2.1E-20 4.5E-25 157.7 18.9 211 16-243 7-242 (245)
109 TIGR03206 benzo_BadH 2-hydroxy 99.9 2.4E-20 5.3E-25 157.8 19.2 214 17-243 2-248 (250)
110 PRK06128 oxidoreductase; Provi 99.9 3.7E-20 8.1E-25 160.9 20.5 218 16-246 53-300 (300)
111 PRK08220 2,3-dihydroxybenzoate 99.9 4.1E-20 8.9E-25 156.6 19.2 216 15-244 5-249 (252)
112 PRK08219 short chain dehydroge 99.9 3.1E-20 6.7E-25 154.8 17.8 200 17-241 2-222 (227)
113 PRK12384 sorbitol-6-phosphate 99.9 2.4E-20 5.2E-25 158.7 17.3 219 18-244 2-257 (259)
114 PRK09186 flagellin modificatio 99.9 3.3E-20 7.2E-25 157.5 18.1 214 16-243 2-254 (256)
115 PRK06182 short chain dehydroge 99.9 8.9E-20 1.9E-24 156.5 20.5 209 17-240 2-246 (273)
116 PRK05717 oxidoreductase; Valid 99.9 8.2E-20 1.8E-24 155.1 19.2 217 11-243 3-247 (255)
117 PRK09134 short chain dehydroge 99.9 1.4E-19 3E-24 154.0 20.4 215 17-248 8-249 (258)
118 PRK07890 short chain dehydroge 99.8 5.1E-20 1.1E-24 156.6 17.5 220 16-243 3-255 (258)
119 TIGR01832 kduD 2-deoxy-D-gluco 99.8 1.2E-19 2.5E-24 153.5 19.6 213 15-242 2-244 (248)
120 PRK07856 short chain dehydroge 99.8 1.4E-19 2.9E-24 153.5 19.8 213 14-246 2-242 (252)
121 PRK08642 fabG 3-ketoacyl-(acyl 99.8 1.3E-19 2.9E-24 153.5 19.5 213 16-243 3-250 (253)
122 PRK12939 short chain dehydroge 99.8 5E-20 1.1E-24 155.8 16.8 213 16-244 5-248 (250)
123 PRK08628 short chain dehydroge 99.8 9.4E-20 2E-24 155.0 17.8 217 14-243 3-250 (258)
124 PRK06523 short chain dehydroge 99.8 3.2E-19 6.8E-24 151.9 21.1 211 16-246 7-259 (260)
125 PRK06701 short chain dehydroge 99.8 4.5E-19 9.7E-24 153.3 22.1 216 14-243 42-286 (290)
126 PRK07577 short chain dehydroge 99.8 2.7E-19 5.9E-24 149.9 20.0 204 17-244 2-233 (234)
127 PRK07814 short chain dehydroge 99.8 1.9E-19 4.1E-24 153.6 19.0 217 14-243 6-251 (263)
128 PRK08324 short chain dehydroge 99.8 1E-19 2.2E-24 174.2 19.2 224 16-245 420-677 (681)
129 PRK08213 gluconate 5-dehydroge 99.8 2.5E-19 5.4E-24 152.5 19.4 217 16-243 10-256 (259)
130 PRK06179 short chain dehydroge 99.8 9.7E-20 2.1E-24 156.0 16.9 207 17-239 3-239 (270)
131 PRK08085 gluconate 5-dehydroge 99.8 2.4E-19 5.3E-24 152.1 19.1 216 15-243 6-250 (254)
132 PRK07326 short chain dehydroge 99.8 4.6E-19 9.9E-24 148.8 20.0 205 16-244 4-234 (237)
133 PRK10538 malonic semialdehyde 99.8 1.5E-19 3.3E-24 152.8 17.2 197 19-231 1-224 (248)
134 PRK06841 short chain dehydroge 99.8 5.2E-19 1.1E-23 150.1 20.1 214 15-244 12-253 (255)
135 PRK06181 short chain dehydroge 99.8 3.4E-19 7.4E-24 152.0 18.9 198 18-229 1-225 (263)
136 PRK12824 acetoacetyl-CoA reduc 99.8 4.7E-19 1E-23 149.4 19.4 213 18-245 2-244 (245)
137 PRK12937 short chain dehydroge 99.8 6.4E-19 1.4E-23 148.6 20.0 214 15-242 2-243 (245)
138 PRK07478 short chain dehydroge 99.8 7.2E-19 1.6E-23 149.2 20.1 218 14-243 2-249 (254)
139 PRK06935 2-deoxy-D-gluconate 3 99.8 5.7E-19 1.2E-23 150.2 19.4 214 16-243 13-255 (258)
140 KOG1221|consensus 99.8 3.7E-19 8E-24 157.9 18.7 244 16-260 10-333 (467)
141 PRK12936 3-ketoacyl-(acyl-carr 99.8 6.2E-19 1.4E-23 148.6 19.4 212 15-243 3-242 (245)
142 PRK06123 short chain dehydroge 99.8 3.7E-19 7.9E-24 150.4 18.0 211 18-242 2-247 (248)
143 PRK08217 fabG 3-ketoacyl-(acyl 99.8 3.9E-19 8.4E-24 150.6 17.8 212 16-243 3-251 (253)
144 PRK06398 aldose dehydrogenase; 99.8 1.4E-18 3E-23 147.8 21.2 211 15-244 3-245 (258)
145 PRK06463 fabG 3-ketoacyl-(acyl 99.8 7.6E-19 1.7E-23 149.2 19.5 212 16-243 5-247 (255)
146 PRK07041 short chain dehydroge 99.8 3.5E-19 7.7E-24 148.8 16.9 211 22-245 1-229 (230)
147 PRK07825 short chain dehydroge 99.8 3.8E-19 8.3E-24 152.6 17.5 191 15-232 2-218 (273)
148 PRK07666 fabG 3-ketoacyl-(acyl 99.8 5.1E-19 1.1E-23 148.8 17.9 193 16-230 5-224 (239)
149 PRK07024 short chain dehydroge 99.8 4.6E-19 9.9E-24 150.7 17.7 188 18-230 2-216 (257)
150 PRK09291 short chain dehydroge 99.8 3E-19 6.5E-24 151.7 16.4 207 18-231 2-230 (257)
151 PRK06500 short chain dehydroge 99.8 6.7E-19 1.4E-23 148.9 18.4 211 16-242 4-245 (249)
152 PRK12743 oxidoreductase; Provi 99.8 1.1E-18 2.4E-23 148.3 19.6 212 18-244 2-244 (256)
153 PRK05565 fabG 3-ketoacyl-(acyl 99.8 3.9E-19 8.4E-24 150.0 16.5 214 15-243 2-245 (247)
154 PRK09242 tropinone reductase; 99.8 1E-18 2.2E-23 148.6 19.2 218 12-242 3-251 (257)
155 PRK06124 gluconate 5-dehydroge 99.8 1.1E-18 2.4E-23 148.3 19.3 218 13-243 6-252 (256)
156 PRK07035 short chain dehydroge 99.8 1E-18 2.3E-23 148.0 18.8 216 14-242 4-249 (252)
157 PRK12742 oxidoreductase; Provi 99.8 1.6E-18 3.5E-23 145.4 19.7 209 16-242 4-234 (237)
158 PRK07985 oxidoreductase; Provi 99.8 1.1E-18 2.4E-23 151.1 19.2 215 16-243 47-291 (294)
159 TIGR01830 3oxo_ACP_reduc 3-oxo 99.8 1.6E-18 3.4E-23 145.6 18.9 205 21-242 1-237 (239)
160 PRK05650 short chain dehydroge 99.8 6.8E-19 1.5E-23 150.8 16.9 197 19-229 1-225 (270)
161 PRK09730 putative NAD(P)-bindi 99.8 1.3E-18 2.8E-23 146.9 18.3 212 18-242 1-246 (247)
162 PRK06114 short chain dehydroge 99.8 2.6E-18 5.7E-23 145.8 20.2 217 15-243 5-251 (254)
163 PRK07454 short chain dehydroge 99.8 1.6E-18 3.4E-23 146.0 18.6 194 17-231 5-225 (241)
164 PRK06113 7-alpha-hydroxysteroi 99.8 1.8E-18 3.9E-23 146.9 18.8 216 16-245 9-252 (255)
165 PRK12747 short chain dehydroge 99.8 2.3E-18 4.9E-23 146.0 19.3 215 16-243 2-250 (252)
166 PRK07063 short chain dehydroge 99.8 1.5E-18 3.1E-23 147.9 17.9 217 16-245 5-256 (260)
167 PRK06550 fabG 3-ketoacyl-(acyl 99.8 3.4E-18 7.4E-23 143.3 19.9 208 15-243 2-232 (235)
168 PRK05993 short chain dehydroge 99.8 1.4E-18 3E-23 149.4 17.8 154 18-181 4-184 (277)
169 PRK08643 acetoin reductase; Va 99.8 3E-18 6.5E-23 145.6 19.6 213 18-243 2-253 (256)
170 PRK06949 short chain dehydroge 99.8 3.8E-18 8.3E-23 145.0 20.2 214 15-242 6-256 (258)
171 PRK12481 2-deoxy-D-gluconate 3 99.8 2.7E-18 5.8E-23 145.5 19.1 213 15-242 5-247 (251)
172 PRK12938 acetyacetyl-CoA reduc 99.8 3.2E-18 6.9E-23 144.5 19.5 212 17-243 2-243 (246)
173 PRK08265 short chain dehydroge 99.8 2E-18 4.2E-23 147.2 18.1 213 16-243 4-244 (261)
174 PRK08277 D-mannonate oxidoredu 99.8 5.3E-18 1.1E-22 145.9 20.8 216 15-243 7-272 (278)
175 PRK06196 oxidoreductase; Provi 99.8 3.6E-18 7.7E-23 149.5 19.8 203 16-230 24-261 (315)
176 PRK08017 oxidoreductase; Provi 99.8 1.1E-18 2.5E-23 148.1 16.0 197 18-232 2-225 (256)
177 PRK05867 short chain dehydroge 99.8 2.7E-18 5.8E-23 145.7 18.2 215 15-243 6-250 (253)
178 PRK08264 short chain dehydroge 99.8 3E-18 6.6E-23 143.9 18.3 182 14-229 2-207 (238)
179 COG4221 Short-chain alcohol de 99.8 2.2E-18 4.7E-23 139.5 15.9 202 16-232 4-231 (246)
180 PRK08339 short chain dehydroge 99.8 4.2E-18 9E-23 145.3 18.5 218 16-246 6-261 (263)
181 PRK12744 short chain dehydroge 99.8 3.5E-18 7.5E-23 145.3 17.8 218 16-244 6-255 (257)
182 PRK06947 glucose-1-dehydrogena 99.8 9.2E-18 2E-22 141.9 20.2 212 18-242 2-247 (248)
183 PRK06172 short chain dehydroge 99.8 6.7E-18 1.4E-22 143.2 19.2 215 16-243 5-250 (253)
184 PRK07097 gluconate 5-dehydroge 99.8 1.2E-17 2.5E-22 142.7 20.5 218 14-244 6-258 (265)
185 PRK08226 short chain dehydroge 99.8 7.5E-18 1.6E-22 143.7 19.2 215 16-243 4-253 (263)
186 PRK06057 short chain dehydroge 99.8 1.3E-17 2.7E-22 141.7 20.2 210 16-243 5-247 (255)
187 PRK07576 short chain dehydroge 99.8 5.2E-18 1.1E-22 144.8 17.2 216 14-243 5-250 (264)
188 PRK05786 fabG 3-ketoacyl-(acyl 99.8 1.5E-17 3.3E-22 139.6 19.5 208 16-242 3-234 (238)
189 PRK08993 2-deoxy-D-gluconate 3 99.8 1.6E-17 3.5E-22 140.9 19.8 213 15-242 7-249 (253)
190 PRK08267 short chain dehydroge 99.8 3.6E-18 7.8E-23 145.4 15.9 195 18-230 1-222 (260)
191 PRK08416 7-alpha-hydroxysteroi 99.8 6.4E-18 1.4E-22 143.9 17.3 217 14-243 4-257 (260)
192 PRK06198 short chain dehydroge 99.8 7.9E-18 1.7E-22 143.3 17.7 215 16-243 4-254 (260)
193 PRK05866 short chain dehydroge 99.8 8.9E-18 1.9E-22 145.4 18.2 194 14-230 36-258 (293)
194 PRK07102 short chain dehydroge 99.8 5.8E-18 1.2E-22 142.7 16.4 188 18-230 1-213 (243)
195 PRK08589 short chain dehydroge 99.8 1.5E-17 3.3E-22 142.6 19.2 213 16-243 4-252 (272)
196 PRK07453 protochlorophyllide o 99.8 3.2E-18 6.9E-23 150.3 15.1 166 15-180 3-229 (322)
197 PRK07904 short chain dehydroge 99.8 1.6E-17 3.4E-22 140.9 18.5 187 17-230 7-223 (253)
198 PRK08936 glucose-1-dehydrogena 99.8 3.6E-17 7.8E-22 139.4 20.7 214 16-243 5-250 (261)
199 TIGR01829 AcAcCoA_reduct aceto 99.8 1.8E-17 3.8E-22 139.5 18.6 210 19-243 1-240 (242)
200 PRK06171 sorbitol-6-phosphate 99.8 2E-17 4.4E-22 141.3 18.9 209 14-243 5-263 (266)
201 KOG1203|consensus 99.8 1.1E-17 2.4E-22 146.2 17.4 236 15-258 76-318 (411)
202 PRK06101 short chain dehydroge 99.8 1.1E-17 2.4E-22 140.8 16.8 185 18-230 1-206 (240)
203 PRK07109 short chain dehydroge 99.8 1.3E-17 2.8E-22 146.9 17.9 206 15-241 5-239 (334)
204 PRK06483 dihydromonapterin red 99.8 4.4E-17 9.5E-22 136.7 20.4 206 18-244 2-234 (236)
205 PRK12748 3-ketoacyl-(acyl-carr 99.8 4.5E-17 9.7E-22 138.4 20.6 210 15-242 2-253 (256)
206 PRK08251 short chain dehydroge 99.8 2.1E-17 4.5E-22 139.7 18.1 188 18-230 2-218 (248)
207 PRK07069 short chain dehydroge 99.8 3.1E-17 6.7E-22 138.8 18.8 210 20-242 1-247 (251)
208 PRK06200 2,3-dihydroxy-2,3-dih 99.8 2.7E-17 5.9E-22 140.3 18.5 213 16-243 4-257 (263)
209 PRK06197 short chain dehydroge 99.8 4.1E-17 8.9E-22 142.3 19.9 169 14-182 12-217 (306)
210 PRK07677 short chain dehydroge 99.8 2.6E-17 5.7E-22 139.5 17.8 214 18-244 1-246 (252)
211 COG0300 DltE Short-chain dehyd 99.8 1.7E-17 3.8E-22 138.0 16.0 198 15-231 3-228 (265)
212 PRK09072 short chain dehydroge 99.8 2.4E-17 5.3E-22 140.6 17.4 196 15-230 2-222 (263)
213 PRK05872 short chain dehydroge 99.8 2.9E-17 6.2E-22 142.5 17.8 205 15-230 6-235 (296)
214 PRK08340 glucose-1-dehydrogena 99.8 5.9E-17 1.3E-21 137.9 18.7 214 19-245 1-255 (259)
215 TIGR02415 23BDH acetoin reduct 99.8 5.7E-17 1.2E-21 137.5 18.5 214 19-242 1-250 (254)
216 PRK05693 short chain dehydroge 99.8 3.6E-17 7.8E-22 140.4 17.4 154 18-181 1-179 (274)
217 PRK06139 short chain dehydroge 99.8 2.6E-17 5.5E-22 144.5 16.7 199 15-231 4-230 (330)
218 PRK06924 short chain dehydroge 99.8 2.7E-17 5.9E-22 139.2 16.4 211 18-239 1-247 (251)
219 PRK08278 short chain dehydroge 99.8 9.3E-17 2E-21 137.8 19.7 196 15-230 3-233 (273)
220 TIGR02632 RhaD_aldol-ADH rhamn 99.8 3.6E-17 7.8E-22 156.1 18.7 224 15-244 411-671 (676)
221 TIGR03325 BphB_TodD cis-2,3-di 99.8 2.9E-17 6.4E-22 140.0 16.2 214 15-243 2-255 (262)
222 TIGR01831 fabG_rel 3-oxoacyl-( 99.8 8.5E-17 1.8E-21 135.2 18.1 206 21-242 1-237 (239)
223 KOG4039|consensus 99.8 1.6E-17 3.5E-22 126.6 11.9 155 16-183 16-174 (238)
224 PRK07062 short chain dehydroge 99.8 1.2E-16 2.5E-21 136.5 18.8 215 15-242 5-260 (265)
225 PRK07023 short chain dehydroge 99.7 2.5E-17 5.3E-22 138.9 14.2 155 18-181 1-185 (243)
226 PRK06079 enoyl-(acyl carrier p 99.7 2E-16 4.3E-21 134.1 19.5 212 16-242 5-248 (252)
227 PRK07533 enoyl-(acyl carrier p 99.7 1.2E-16 2.5E-21 136.0 18.0 216 12-242 4-253 (258)
228 PRK06484 short chain dehydroge 99.7 1.5E-16 3.2E-21 148.8 19.9 212 17-243 268-507 (520)
229 TIGR02685 pter_reduc_Leis pter 99.7 2E-16 4.4E-21 135.2 19.1 211 19-245 2-264 (267)
230 PRK07831 short chain dehydroge 99.7 3.5E-16 7.6E-21 133.3 20.4 215 14-242 13-260 (262)
231 PRK06125 short chain dehydroge 99.7 2.4E-16 5.2E-21 134.1 18.3 215 15-244 4-254 (259)
232 PRK06940 short chain dehydroge 99.7 3.1E-16 6.7E-21 134.6 18.7 216 18-243 2-263 (275)
233 PRK08703 short chain dehydroge 99.7 3.1E-16 6.7E-21 131.8 18.2 190 16-228 4-226 (239)
234 KOG1372|consensus 99.7 1.7E-16 3.6E-21 127.4 15.5 237 19-261 29-300 (376)
235 PRK08945 putative oxoacyl-(acy 99.7 3.1E-16 6.7E-21 132.5 17.8 193 15-230 9-232 (247)
236 PRK05884 short chain dehydroge 99.7 2.5E-16 5.3E-21 131.0 16.5 190 19-243 1-218 (223)
237 PRK08690 enoyl-(acyl carrier p 99.7 5.2E-16 1.1E-20 132.2 18.9 214 16-243 4-252 (261)
238 PRK06505 enoyl-(acyl carrier p 99.7 5.4E-16 1.2E-20 132.8 18.9 214 16-243 5-251 (271)
239 PRK08159 enoyl-(acyl carrier p 99.7 3.9E-16 8.4E-21 133.7 17.9 215 16-244 8-255 (272)
240 PRK07792 fabG 3-ketoacyl-(acyl 99.7 6.9E-16 1.5E-20 134.5 19.8 210 14-242 8-253 (306)
241 PRK08415 enoyl-(acyl carrier p 99.7 2.8E-16 6.1E-21 134.7 16.9 214 15-243 2-249 (274)
242 PRK07832 short chain dehydroge 99.7 3.7E-16 7.9E-21 134.0 16.6 197 19-229 1-231 (272)
243 PRK06603 enoyl-(acyl carrier p 99.7 7.2E-16 1.6E-20 131.3 17.8 214 16-243 6-252 (260)
244 PRK08594 enoyl-(acyl carrier p 99.7 9.4E-16 2E-20 130.3 18.4 215 15-242 4-252 (257)
245 PRK07578 short chain dehydroge 99.7 5.5E-16 1.2E-20 126.6 16.2 179 19-239 1-198 (199)
246 PRK07370 enoyl-(acyl carrier p 99.7 1.4E-15 3E-20 129.3 18.6 216 15-243 3-253 (258)
247 KOG2774|consensus 99.7 7.7E-16 1.7E-20 122.8 15.7 233 17-259 43-300 (366)
248 PRK07984 enoyl-(acyl carrier p 99.7 1.9E-15 4.1E-20 128.7 19.2 214 16-243 4-251 (262)
249 PRK06953 short chain dehydroge 99.7 2.1E-15 4.5E-20 125.4 19.0 190 18-240 1-216 (222)
250 PRK07201 short chain dehydroge 99.7 6.7E-16 1.4E-20 148.3 18.3 192 15-230 368-588 (657)
251 PRK06997 enoyl-(acyl carrier p 99.7 1.4E-15 3E-20 129.5 18.1 213 16-243 4-251 (260)
252 PRK12859 3-ketoacyl-(acyl-carr 99.7 3.7E-15 8.1E-20 126.6 20.6 209 16-242 4-254 (256)
253 PRK05855 short chain dehydroge 99.7 4.2E-16 9.2E-21 147.5 15.7 207 14-231 311-549 (582)
254 PRK07889 enoyl-(acyl carrier p 99.7 2.2E-15 4.9E-20 128.0 18.3 213 16-242 5-250 (256)
255 PRK05854 short chain dehydroge 99.7 6.7E-16 1.4E-20 135.0 14.6 168 14-181 10-213 (313)
256 PRK08261 fabG 3-ketoacyl-(acyl 99.7 2.3E-15 5E-20 138.1 18.7 210 16-243 208-446 (450)
257 PRK08177 short chain dehydroge 99.7 1.2E-15 2.5E-20 127.2 15.0 158 18-181 1-183 (225)
258 PRK07791 short chain dehydroge 99.7 2.1E-15 4.6E-20 130.2 16.8 212 16-245 4-259 (286)
259 PRK07424 bifunctional sterol d 99.7 1.5E-15 3.2E-20 135.6 16.1 183 14-231 174-373 (406)
260 PRK12367 short chain dehydroge 99.7 3.4E-15 7.4E-20 125.7 16.9 180 16-231 12-213 (245)
261 PRK09009 C factor cell-cell si 99.7 1.1E-14 2.3E-19 122.2 19.3 195 19-240 1-229 (235)
262 PRK06484 short chain dehydroge 99.7 6.6E-15 1.4E-19 137.7 18.5 210 17-241 4-245 (520)
263 KOG1205|consensus 99.7 3.5E-15 7.6E-20 125.2 14.4 149 13-166 7-177 (282)
264 KOG4288|consensus 99.6 1.3E-15 2.9E-20 121.0 11.0 205 19-238 53-270 (283)
265 TIGR01500 sepiapter_red sepiap 99.6 5.8E-15 1.2E-19 125.4 15.2 197 20-229 2-243 (256)
266 smart00822 PKS_KR This enzymat 99.6 8.5E-15 1.9E-19 116.8 14.3 155 19-178 1-178 (180)
267 KOG3019|consensus 99.6 4.3E-15 9.4E-20 117.8 12.0 238 18-285 12-276 (315)
268 TIGR01289 LPOR light-dependent 99.6 5.8E-14 1.3E-18 122.8 19.2 203 18-229 3-267 (314)
269 PRK05599 hypothetical protein; 99.6 5.7E-14 1.2E-18 118.6 16.9 194 19-240 1-223 (246)
270 KOG1201|consensus 99.6 1.1E-13 2.5E-18 115.3 16.5 197 12-231 32-257 (300)
271 PRK08303 short chain dehydroge 99.6 9.4E-14 2E-18 120.8 16.3 205 15-230 5-254 (305)
272 PLN02780 ketoreductase/ oxidor 99.6 4.1E-14 8.9E-19 123.9 13.7 189 17-229 52-271 (320)
273 PF13561 adh_short_C2: Enoyl-( 99.6 2.7E-14 5.9E-19 120.2 10.4 205 25-242 1-239 (241)
274 PRK08862 short chain dehydroge 99.5 4.4E-13 9.6E-18 111.7 15.7 159 15-181 2-190 (227)
275 PRK12428 3-alpha-hydroxysteroi 99.5 3.5E-13 7.7E-18 113.4 15.0 190 34-243 1-230 (241)
276 PLN02730 enoyl-[acyl-carrier-p 99.5 1.5E-12 3.2E-17 112.6 18.8 215 14-243 5-286 (303)
277 KOG0725|consensus 99.5 2.5E-12 5.3E-17 109.4 19.7 220 14-245 4-263 (270)
278 KOG1200|consensus 99.5 1.6E-12 3.5E-17 101.1 16.6 210 17-242 13-253 (256)
279 PF00106 adh_short: short chai 99.5 1.5E-13 3.2E-18 108.9 10.4 143 19-166 1-162 (167)
280 KOG1611|consensus 99.5 1.9E-12 4.1E-17 103.2 16.0 202 16-245 1-247 (249)
281 PLN00015 protochlorophyllide r 99.5 5.8E-13 1.3E-17 116.2 13.4 199 22-229 1-263 (308)
282 KOG4169|consensus 99.5 1.5E-12 3.2E-17 103.9 13.8 214 15-243 2-244 (261)
283 KOG1207|consensus 99.5 1.6E-13 3.5E-18 104.7 8.0 211 15-242 4-241 (245)
284 KOG1208|consensus 99.4 5.7E-12 1.2E-16 108.8 14.6 203 15-230 32-270 (314)
285 PRK06300 enoyl-(acyl carrier p 99.4 4.6E-11 9.9E-16 103.3 19.8 216 14-243 4-285 (299)
286 COG1028 FabG Dehydrogenases wi 99.4 1.5E-11 3.3E-16 104.0 14.7 162 15-181 2-192 (251)
287 KOG1209|consensus 99.4 4.1E-12 8.8E-17 100.3 9.5 155 17-180 6-187 (289)
288 COG3967 DltE Short-chain dehyd 99.4 9.7E-12 2.1E-16 97.7 10.9 159 15-181 2-188 (245)
289 KOG1610|consensus 99.4 3.5E-11 7.6E-16 101.0 15.0 160 15-181 26-214 (322)
290 PF08659 KR: KR domain; Inter 99.3 1.7E-11 3.8E-16 98.4 12.2 151 20-176 2-176 (181)
291 KOG1210|consensus 99.3 9.7E-11 2.1E-15 98.2 13.5 197 19-230 34-260 (331)
292 TIGR02813 omega_3_PfaA polyket 99.2 3E-10 6.4E-15 120.5 14.5 160 17-181 1996-2223(2582)
293 PRK08309 short chain dehydroge 99.2 1.7E-10 3.8E-15 91.8 9.8 155 19-231 1-166 (177)
294 PTZ00325 malate dehydrogenase; 99.1 5.2E-10 1.1E-14 97.0 10.9 162 16-181 6-183 (321)
295 PLN00106 malate dehydrogenase 99.1 1.7E-09 3.6E-14 94.0 11.3 160 18-181 18-193 (323)
296 PRK06720 hypothetical protein; 99.1 3.4E-09 7.4E-14 83.8 12.1 84 14-97 12-103 (169)
297 KOG1199|consensus 99.0 7.7E-10 1.7E-14 84.6 7.5 209 16-241 7-254 (260)
298 COG1748 LYS9 Saccharopine dehy 99.0 1.8E-09 3.8E-14 95.0 8.9 98 18-133 1-99 (389)
299 KOG1014|consensus 98.9 8.5E-09 1.8E-13 86.7 11.0 160 19-183 50-238 (312)
300 cd01336 MDH_cytoplasmic_cytoso 98.9 6.6E-09 1.4E-13 90.8 10.8 162 18-181 2-184 (325)
301 PRK09620 hypothetical protein; 98.8 3.2E-08 7E-13 81.9 8.1 81 17-100 2-100 (229)
302 PRK06732 phosphopantothenate-- 98.7 6E-08 1.3E-12 80.6 9.1 78 16-99 14-93 (229)
303 PRK05086 malate dehydrogenase; 98.7 1.3E-07 2.7E-12 82.3 11.0 114 19-135 1-119 (312)
304 COG0623 FabI Enoyl-[acyl-carri 98.7 1.1E-06 2.4E-11 70.8 15.1 217 15-245 3-252 (259)
305 PF03435 Saccharop_dh: Sacchar 98.7 8.7E-08 1.9E-12 86.4 8.8 94 21-131 1-96 (386)
306 KOG1204|consensus 98.6 7.8E-08 1.7E-12 77.2 6.5 198 18-230 6-238 (253)
307 TIGR00715 precor6x_red precorr 98.6 2.8E-07 6.2E-12 77.5 10.1 93 19-128 1-95 (256)
308 cd01078 NAD_bind_H4MPT_DH NADP 98.6 1.2E-07 2.6E-12 77.0 7.3 84 15-98 25-108 (194)
309 cd00704 MDH Malate dehydrogena 98.5 8.6E-07 1.9E-11 77.4 10.4 103 20-133 2-126 (323)
310 cd01338 MDH_choloroplast_like 98.5 1.2E-06 2.7E-11 76.4 10.1 158 18-182 2-185 (322)
311 PRK13656 trans-2-enoyl-CoA red 98.5 1E-05 2.2E-10 71.4 15.7 80 18-98 41-142 (398)
312 TIGR01758 MDH_euk_cyt malate d 98.4 2.5E-06 5.4E-11 74.5 10.4 103 20-133 1-125 (324)
313 KOG1478|consensus 98.4 3.6E-06 7.9E-11 68.8 9.9 165 17-181 2-233 (341)
314 TIGR00521 coaBC_dfp phosphopan 98.3 4.6E-05 9.9E-10 68.2 16.1 175 15-227 182-389 (390)
315 KOG2733|consensus 98.3 2E-06 4.4E-11 73.5 6.9 78 20-97 7-93 (423)
316 PRK05579 bifunctional phosphop 98.3 3.1E-06 6.7E-11 75.9 8.5 179 15-228 185-394 (399)
317 PF00056 Ldh_1_N: lactate/mala 98.3 4.1E-07 8.8E-12 69.7 2.3 107 19-133 1-118 (141)
318 PRK14982 acyl-ACP reductase; P 98.2 2.9E-06 6.2E-11 74.1 6.7 73 15-98 152-226 (340)
319 PLN02968 Probable N-acetyl-gam 98.2 5.5E-06 1.2E-10 73.9 8.5 104 16-140 36-141 (381)
320 PF01118 Semialdhyde_dh: Semia 98.1 2.2E-05 4.9E-10 58.5 9.2 98 20-136 1-100 (121)
321 cd05294 LDH-like_MDH_nadp A la 98.1 1.1E-05 2.5E-10 70.2 8.6 115 19-134 1-122 (309)
322 cd01337 MDH_glyoxysomal_mitoch 98.1 7.1E-05 1.5E-09 64.9 12.1 114 19-135 1-119 (310)
323 PRK05671 aspartate-semialdehyd 98.1 1.8E-05 3.8E-10 69.5 8.5 96 17-137 3-101 (336)
324 PRK14874 aspartate-semialdehyd 98.1 3.4E-05 7.3E-10 68.0 10.0 94 18-136 1-97 (334)
325 COG0569 TrkA K+ transport syst 98.0 2.4E-05 5.1E-10 64.9 8.4 97 19-132 1-99 (225)
326 TIGR01759 MalateDH-SF1 malate 98.0 4.2E-05 9.1E-10 66.8 10.0 116 17-134 2-129 (323)
327 PRK12548 shikimate 5-dehydroge 98.0 2.3E-05 5E-10 67.6 7.1 81 16-97 124-209 (289)
328 TIGR01772 MDH_euk_gproteo mala 97.9 0.00012 2.7E-09 63.5 11.2 112 20-134 1-117 (312)
329 PRK05442 malate dehydrogenase; 97.9 0.00011 2.3E-09 64.4 10.7 110 17-133 3-130 (326)
330 COG3268 Uncharacterized conser 97.9 3.2E-05 7E-10 65.8 7.1 76 19-98 7-82 (382)
331 PRK00436 argC N-acetyl-gamma-g 97.9 7E-05 1.5E-09 66.2 9.6 101 18-138 2-104 (343)
332 PF04127 DFP: DNA / pantothena 97.9 5.8E-05 1.2E-09 60.4 8.2 128 25-175 26-167 (185)
333 PRK08664 aspartate-semialdehyd 97.9 5.5E-05 1.2E-09 67.1 8.9 101 16-135 1-109 (349)
334 PF01113 DapB_N: Dihydrodipico 97.9 5.5E-05 1.2E-09 56.6 7.3 93 19-131 1-96 (124)
335 PRK14106 murD UDP-N-acetylmura 97.9 6.6E-05 1.4E-09 69.2 9.0 77 16-98 3-79 (450)
336 PLN02819 lysine-ketoglutarate 97.8 8.5E-05 1.8E-09 73.8 8.5 77 17-97 568-658 (1042)
337 PRK00048 dihydrodipicolinate r 97.8 0.0002 4.3E-09 60.8 9.6 69 18-97 1-70 (257)
338 PRK00066 ldh L-lactate dehydro 97.8 0.00045 9.7E-09 60.4 11.9 108 18-133 6-122 (315)
339 PRK09496 trkA potassium transp 97.8 0.00011 2.4E-09 67.8 8.4 74 19-97 1-75 (453)
340 TIGR01850 argC N-acetyl-gamma- 97.7 0.00014 3.1E-09 64.3 8.6 102 19-139 1-105 (346)
341 COG0039 Mdh Malate/lactate deh 97.7 0.00019 4E-09 61.8 9.0 109 19-134 1-118 (313)
342 PRK06223 malate dehydrogenase; 97.7 0.00013 2.8E-09 63.7 8.2 115 18-134 2-120 (307)
343 cd05291 HicDH_like L-2-hydroxy 97.7 0.00037 8.1E-09 60.7 10.6 107 19-133 1-117 (306)
344 TIGR01296 asd_B aspartate-semi 97.6 0.0003 6.6E-09 62.0 8.8 90 20-134 1-93 (339)
345 PRK12475 thiamine/molybdopteri 97.6 0.00061 1.3E-08 60.0 10.4 108 16-139 22-154 (338)
346 PF01488 Shikimate_DH: Shikima 97.6 0.0002 4.2E-09 54.5 6.4 78 15-99 9-87 (135)
347 COG0002 ArgC Acetylglutamate s 97.6 0.00048 1E-08 59.5 9.3 105 17-138 1-106 (349)
348 PRK07688 thiamine/molybdopteri 97.6 0.00066 1.4E-08 59.9 10.4 108 16-139 22-154 (339)
349 cd05290 LDH_3 A subgroup of L- 97.6 0.0011 2.3E-08 57.7 11.4 107 20-134 1-119 (307)
350 cd00650 LDH_MDH_like NAD-depen 97.6 0.00025 5.3E-09 60.5 7.4 112 21-133 1-119 (263)
351 PRK06129 3-hydroxyacyl-CoA deh 97.6 0.00014 3E-09 63.5 5.8 35 18-53 2-36 (308)
352 PLN02383 aspartate semialdehyd 97.6 0.00068 1.5E-08 59.8 9.9 97 18-139 7-106 (344)
353 PRK08057 cobalt-precorrin-6x r 97.5 0.0015 3.3E-08 54.8 11.4 94 17-129 1-96 (248)
354 KOG1494|consensus 97.5 0.00083 1.8E-08 56.0 9.4 115 15-133 25-145 (345)
355 TIGR01763 MalateDH_bact malate 97.5 0.00038 8.3E-09 60.5 8.0 113 19-134 2-119 (305)
356 PLN02602 lactate dehydrogenase 97.5 0.00039 8.4E-09 61.4 8.1 108 19-133 38-154 (350)
357 PTZ00117 malate dehydrogenase; 97.5 0.00049 1.1E-08 60.3 8.7 111 17-134 4-123 (319)
358 PLN00112 malate dehydrogenase 97.5 0.0012 2.6E-08 59.9 11.1 112 16-134 98-227 (444)
359 PRK04148 hypothetical protein; 97.5 0.00067 1.5E-08 50.9 7.8 92 18-131 17-108 (134)
360 PTZ00082 L-lactate dehydrogena 97.5 0.00046 1E-08 60.4 7.9 113 16-135 4-130 (321)
361 cd05292 LDH_2 A subgroup of L- 97.4 0.0027 5.8E-08 55.4 11.9 107 19-133 1-115 (308)
362 cd05293 LDH_1 A subgroup of L- 97.4 0.00044 9.5E-09 60.3 7.0 109 18-133 3-120 (312)
363 cd01485 E1-1_like Ubiquitin ac 97.4 0.0024 5.2E-08 51.9 10.8 109 16-139 17-151 (198)
364 PRK11863 N-acetyl-gamma-glutam 97.4 0.00084 1.8E-08 58.2 8.5 206 17-263 1-241 (313)
365 PRK06598 aspartate-semialdehyd 97.4 0.0015 3.2E-08 57.8 9.7 86 18-126 1-90 (369)
366 cd05295 MDH_like Malate dehydr 97.4 0.00035 7.5E-09 63.3 5.8 111 17-134 122-250 (452)
367 PF00899 ThiF: ThiF family; I 97.4 0.0043 9.2E-08 47.1 11.0 106 18-139 2-130 (135)
368 PRK09496 trkA potassium transp 97.3 0.0015 3.2E-08 60.3 9.8 102 16-134 229-331 (453)
369 COG2085 Predicted dinucleotide 97.3 0.00048 1E-08 55.5 5.5 70 18-97 1-70 (211)
370 TIGR00978 asd_EA aspartate-sem 97.3 0.0025 5.4E-08 56.4 10.6 101 19-139 1-110 (341)
371 cd00757 ThiF_MoeB_HesA_family 97.3 0.0029 6.3E-08 52.7 10.2 108 16-139 19-149 (228)
372 cd01080 NAD_bind_m-THF_DH_Cycl 97.3 0.0012 2.6E-08 52.0 7.4 58 15-98 41-98 (168)
373 TIGR02356 adenyl_thiF thiazole 97.3 0.0026 5.6E-08 51.9 9.3 108 16-139 19-149 (202)
374 KOG0023|consensus 97.2 0.0016 3.4E-08 55.6 7.9 103 17-137 181-283 (360)
375 PRK02472 murD UDP-N-acetylmura 97.2 0.0022 4.9E-08 59.0 9.8 77 16-99 3-80 (447)
376 TIGR01757 Malate-DH_plant mala 97.2 0.0035 7.6E-08 56.0 10.4 111 16-134 42-171 (387)
377 PRK06019 phosphoribosylaminoim 97.2 0.0019 4E-08 58.0 8.8 68 18-93 2-69 (372)
378 PRK06728 aspartate-semialdehyd 97.2 0.0016 3.4E-08 57.3 8.1 98 16-138 3-104 (347)
379 TIGR02114 coaB_strep phosphopa 97.2 0.0011 2.4E-08 55.1 6.7 72 16-98 13-91 (227)
380 TIGR01470 cysG_Nterm siroheme 97.2 0.003 6.6E-08 51.6 9.2 89 16-126 7-95 (205)
381 COG0136 Asd Aspartate-semialde 97.2 0.0028 6.1E-08 54.8 9.3 103 18-145 1-107 (334)
382 cd01065 NAD_bind_Shikimate_DH 97.2 0.00069 1.5E-08 52.6 5.2 76 16-99 17-93 (155)
383 PRK11064 wecC UDP-N-acetyl-D-m 97.2 0.0014 3.1E-08 59.6 7.8 37 16-53 1-37 (415)
384 PRK11199 tyrA bifunctional cho 97.2 0.0012 2.7E-08 59.1 7.0 35 17-51 97-131 (374)
385 cd01483 E1_enzyme_family Super 97.1 0.0093 2E-07 45.7 11.0 104 20-139 1-127 (143)
386 PF03721 UDPG_MGDP_dh_N: UDP-g 97.1 0.00028 6.1E-09 56.6 2.5 78 19-99 1-88 (185)
387 PF02254 TrkA_N: TrkA-N domain 97.1 0.0018 4E-08 47.6 6.6 70 21-96 1-71 (116)
388 TIGR01851 argC_other N-acetyl- 97.1 0.0029 6.2E-08 54.6 8.3 81 20-137 3-84 (310)
389 cd00300 LDH_like L-lactate deh 97.1 0.0024 5.2E-08 55.5 7.9 105 21-133 1-115 (300)
390 PRK07819 3-hydroxybutyryl-CoA 97.1 0.00093 2E-08 57.6 5.3 37 17-54 4-40 (286)
391 KOG4022|consensus 97.1 0.057 1.2E-06 41.7 14.0 193 17-241 2-225 (236)
392 COG0289 DapB Dihydrodipicolina 97.1 0.0048 1.1E-07 51.4 9.0 36 17-52 1-38 (266)
393 TIGR02717 AcCoA-syn-alpha acet 97.1 0.048 1E-06 50.2 16.5 92 16-138 5-101 (447)
394 PRK00258 aroE shikimate 5-dehy 97.0 0.0012 2.6E-08 56.7 5.7 76 15-98 120-196 (278)
395 TIGR00518 alaDH alanine dehydr 97.0 0.0041 8.9E-08 55.6 9.2 76 17-98 166-241 (370)
396 PF10727 Rossmann-like: Rossma 97.0 0.00081 1.8E-08 50.2 3.9 38 12-50 4-41 (127)
397 COG0026 PurK Phosphoribosylami 97.0 0.0031 6.8E-08 55.0 7.9 68 18-93 1-68 (375)
398 PF03446 NAD_binding_2: NAD bi 97.0 0.0019 4.1E-08 50.8 6.1 35 18-53 1-35 (163)
399 TIGR02355 moeB molybdopterin s 97.0 0.012 2.7E-07 49.3 11.3 108 16-139 22-152 (240)
400 cd01492 Aos1_SUMO Ubiquitin ac 97.0 0.0054 1.2E-07 49.8 8.9 107 16-139 19-148 (197)
401 PRK08644 thiamine biosynthesis 97.0 0.0097 2.1E-07 48.9 10.5 109 16-140 26-157 (212)
402 PRK08040 putative semialdehyde 97.0 0.0022 4.8E-08 56.3 7.0 97 17-138 3-102 (336)
403 PRK09288 purT phosphoribosylgl 97.0 0.0043 9.4E-08 56.1 9.2 71 17-95 11-83 (395)
404 TIGR01745 asd_gamma aspartate- 97.0 0.0047 1E-07 54.6 8.8 102 19-144 1-106 (366)
405 PRK08328 hypothetical protein; 97.0 0.0058 1.3E-07 50.9 9.0 109 16-140 25-157 (231)
406 PRK05690 molybdopterin biosynt 97.0 0.015 3.3E-07 48.9 11.5 108 16-139 30-160 (245)
407 PF08732 HIM1: HIM1; InterPro 96.9 0.0027 5.9E-08 55.7 6.9 89 87-181 203-302 (410)
408 PRK15116 sulfur acceptor prote 96.9 0.019 4.2E-07 48.7 11.8 109 16-140 28-160 (268)
409 TIGR03026 NDP-sugDHase nucleot 96.9 0.0016 3.6E-08 59.2 5.6 34 19-53 1-34 (411)
410 PRK01438 murD UDP-N-acetylmura 96.9 0.0056 1.2E-07 56.9 9.1 77 15-98 13-89 (480)
411 PRK13982 bifunctional SbtC-lik 96.9 0.0061 1.3E-07 55.8 9.0 76 15-100 253-347 (475)
412 cd01339 LDH-like_MDH L-lactate 96.9 0.0026 5.5E-08 55.4 6.3 105 21-133 1-115 (300)
413 PF02571 CbiJ: Precorrin-6x re 96.9 0.013 2.7E-07 49.4 10.1 93 19-127 1-95 (249)
414 PRK08293 3-hydroxybutyryl-CoA 96.9 0.0017 3.8E-08 56.0 5.1 35 18-53 3-37 (287)
415 TIGR02853 spore_dpaA dipicolin 96.8 0.0019 4.2E-08 55.6 5.2 71 15-96 148-218 (287)
416 PRK08655 prephenate dehydrogen 96.8 0.002 4.4E-08 58.9 5.5 68 19-97 1-68 (437)
417 PRK08306 dipicolinate synthase 96.8 0.0022 4.8E-08 55.5 5.4 70 16-96 150-219 (296)
418 PRK14192 bifunctional 5,10-met 96.8 0.0049 1.1E-07 52.8 7.2 57 15-97 156-212 (283)
419 PRK05597 molybdopterin biosynt 96.8 0.019 4.2E-07 51.0 11.3 107 16-138 26-155 (355)
420 cd01487 E1_ThiF_like E1_ThiF_l 96.8 0.015 3.3E-07 46.2 9.6 105 20-140 1-128 (174)
421 TIGR00507 aroE shikimate 5-deh 96.8 0.0031 6.7E-08 54.0 6.0 74 17-98 116-189 (270)
422 cd01489 Uba2_SUMO Ubiquitin ac 96.8 0.019 4E-07 50.0 10.7 105 20-139 1-128 (312)
423 PF02826 2-Hacid_dh_C: D-isome 96.8 0.0025 5.5E-08 50.8 5.1 70 14-97 32-101 (178)
424 TIGR01915 npdG NADPH-dependent 96.8 0.002 4.3E-08 53.3 4.5 36 19-54 1-36 (219)
425 PRK08223 hypothetical protein; 96.7 0.022 4.7E-07 48.7 10.7 108 16-137 25-155 (287)
426 COG1004 Ugd Predicted UDP-gluc 96.7 0.0022 4.8E-08 56.5 4.6 79 19-100 1-89 (414)
427 PRK07066 3-hydroxybutyryl-CoA 96.7 0.0063 1.4E-07 53.2 7.4 77 18-97 7-93 (321)
428 PRK06718 precorrin-2 dehydroge 96.7 0.0088 1.9E-07 48.8 7.7 72 16-96 8-79 (202)
429 PRK14175 bifunctional 5,10-met 96.7 0.0079 1.7E-07 51.4 7.6 58 15-98 155-212 (286)
430 PRK08762 molybdopterin biosynt 96.7 0.012 2.7E-07 52.8 9.3 107 16-138 133-262 (376)
431 PRK13940 glutamyl-tRNA reducta 96.7 0.0027 5.9E-08 57.5 5.1 75 16-99 179-254 (414)
432 cd05213 NAD_bind_Glutamyl_tRNA 96.7 0.0027 5.8E-08 55.5 4.8 74 16-99 176-250 (311)
433 PRK13302 putative L-aspartate 96.7 0.0088 1.9E-07 51.1 7.8 74 14-97 2-77 (271)
434 TIGR01035 hemA glutamyl-tRNA r 96.6 0.003 6.5E-08 57.5 5.2 73 16-98 178-251 (417)
435 PRK06719 precorrin-2 dehydroge 96.6 0.0087 1.9E-07 46.7 7.1 69 16-96 11-79 (157)
436 smart00859 Semialdhyde_dh Semi 96.6 0.0049 1.1E-07 45.9 5.5 74 20-97 1-75 (122)
437 cd00755 YgdL_like Family of ac 96.6 0.035 7.7E-07 46.1 11.1 109 16-140 9-141 (231)
438 PRK04207 glyceraldehyde-3-phos 96.6 0.0083 1.8E-07 53.1 7.7 102 18-135 1-111 (341)
439 COG0604 Qor NADPH:quinone redu 96.6 0.0065 1.4E-07 53.4 6.9 100 18-137 143-245 (326)
440 PRK14619 NAD(P)H-dependent gly 96.6 0.0059 1.3E-07 53.3 6.6 36 17-53 3-38 (308)
441 PRK00045 hemA glutamyl-tRNA re 96.6 0.0033 7.2E-08 57.3 5.2 73 16-98 180-253 (423)
442 PRK08591 acetyl-CoA carboxylas 96.6 0.022 4.7E-07 52.6 10.5 73 18-96 2-83 (451)
443 TIGR01771 L-LDH-NAD L-lactate 96.5 0.022 4.7E-07 49.5 9.5 103 23-133 1-113 (299)
444 TIGR01019 sucCoAalpha succinyl 96.5 0.25 5.3E-06 42.5 15.7 90 18-135 6-97 (286)
445 PRK14194 bifunctional 5,10-met 96.5 0.0092 2E-07 51.3 7.0 58 15-98 156-213 (301)
446 cd01075 NAD_bind_Leu_Phe_Val_D 96.5 0.0075 1.6E-07 49.1 6.2 38 14-52 24-61 (200)
447 TIGR00514 accC acetyl-CoA carb 96.5 0.022 4.8E-07 52.5 10.1 73 18-96 2-83 (449)
448 PF13380 CoA_binding_2: CoA bi 96.5 0.0081 1.8E-07 44.3 5.8 85 19-134 1-88 (116)
449 PRK08462 biotin carboxylase; V 96.5 0.026 5.6E-07 52.0 10.5 93 18-130 4-105 (445)
450 PRK04308 murD UDP-N-acetylmura 96.5 0.029 6.3E-07 51.7 10.8 76 16-99 3-79 (445)
451 TIGR02354 thiF_fam2 thiamine b 96.5 0.054 1.2E-06 44.1 11.0 77 16-94 19-117 (200)
452 PRK07878 molybdopterin biosynt 96.5 0.036 7.8E-07 50.1 10.8 107 17-139 41-170 (392)
453 PRK06901 aspartate-semialdehyd 96.5 0.021 4.5E-07 49.4 8.8 93 17-135 2-97 (322)
454 cd01484 E1-2_like Ubiquitin ac 96.4 0.045 9.7E-07 45.6 10.5 105 20-139 1-129 (234)
455 PRK09424 pntA NAD(P) transhydr 96.4 0.022 4.8E-07 52.9 9.5 103 17-134 164-286 (509)
456 PRK05600 thiamine biosynthesis 96.4 0.036 7.9E-07 49.6 10.5 106 16-137 39-167 (370)
457 PRK07531 bifunctional 3-hydrox 96.4 0.0088 1.9E-07 55.8 6.8 79 18-97 4-90 (495)
458 cd08259 Zn_ADH5 Alcohol dehydr 96.4 0.016 3.5E-07 50.7 8.3 97 18-137 163-260 (332)
459 PRK06849 hypothetical protein; 96.4 0.014 3.1E-07 52.7 8.0 37 17-53 3-39 (389)
460 PRK03659 glutathione-regulated 96.4 0.012 2.6E-07 56.2 7.8 94 18-130 400-495 (601)
461 TIGR01142 purT phosphoribosylg 96.4 0.016 3.4E-07 52.2 8.2 68 20-95 1-70 (380)
462 COG2084 MmsB 3-hydroxyisobutyr 96.4 0.006 1.3E-07 52.1 5.1 66 19-96 1-66 (286)
463 PRK07679 pyrroline-5-carboxyla 96.4 0.0055 1.2E-07 52.7 4.9 71 16-97 1-75 (279)
464 PRK08818 prephenate dehydrogen 96.4 0.011 2.3E-07 52.7 6.8 58 17-97 3-61 (370)
465 PLN02948 phosphoribosylaminoim 96.4 0.025 5.4E-07 53.7 9.6 71 16-94 20-90 (577)
466 PRK09260 3-hydroxybutyryl-CoA 96.4 0.0046 9.9E-08 53.4 4.4 35 19-54 2-36 (288)
467 PF02882 THF_DHG_CYH_C: Tetrah 96.3 0.03 6.5E-07 43.6 8.4 59 15-99 33-91 (160)
468 PRK15438 erythronate-4-phospha 96.3 0.014 3E-07 52.1 7.3 64 15-96 113-176 (378)
469 PF03807 F420_oxidored: NADP o 96.3 0.0082 1.8E-07 42.4 4.9 67 20-97 1-71 (96)
470 TIGR00036 dapB dihydrodipicoli 96.3 0.056 1.2E-06 46.1 10.7 33 18-50 1-34 (266)
471 PRK14188 bifunctional 5,10-met 96.3 0.016 3.6E-07 49.8 7.4 57 15-98 155-212 (296)
472 COG0027 PurT Formate-dependent 96.3 0.014 3.1E-07 49.7 6.7 69 18-94 12-82 (394)
473 PRK00094 gpsA NAD(P)H-dependen 96.3 0.0051 1.1E-07 54.0 4.4 77 18-97 1-81 (325)
474 PRK07877 hypothetical protein; 96.3 0.058 1.3E-06 52.3 11.7 103 17-136 106-231 (722)
475 PLN02353 probable UDP-glucose 96.3 0.011 2.3E-07 54.7 6.5 80 18-99 1-90 (473)
476 PRK10669 putative cation:proto 96.3 0.016 3.4E-07 55.0 7.9 72 19-96 418-490 (558)
477 COG1179 Dinucleotide-utilizing 96.3 0.035 7.5E-07 45.8 8.7 110 17-143 29-161 (263)
478 PRK05808 3-hydroxybutyryl-CoA 96.3 0.0055 1.2E-07 52.8 4.4 37 17-54 2-38 (282)
479 PRK15469 ghrA bifunctional gly 96.3 0.019 4E-07 50.2 7.6 68 15-97 133-200 (312)
480 COG0169 AroE Shikimate 5-dehyd 96.2 0.012 2.6E-07 50.4 6.1 106 16-127 124-244 (283)
481 KOG1202|consensus 96.2 0.028 6E-07 56.0 9.1 160 11-176 1760-1945(2376)
482 TIGR01809 Shik-DH-AROM shikima 96.2 0.013 2.8E-07 50.5 6.3 78 16-98 123-201 (282)
483 COG1023 Gnd Predicted 6-phosph 96.2 0.054 1.2E-06 44.6 9.2 105 19-137 1-123 (300)
484 cd05212 NAD_bind_m-THF_DH_Cycl 96.2 0.03 6.5E-07 42.6 7.5 58 15-98 25-82 (140)
485 COG0771 MurD UDP-N-acetylmuram 96.2 0.041 8.8E-07 50.1 9.6 78 16-100 5-82 (448)
486 PRK06035 3-hydroxyacyl-CoA deh 96.2 0.0093 2E-07 51.6 5.4 36 18-54 3-38 (291)
487 PF01262 AlaDh_PNT_C: Alanine 96.2 0.0043 9.4E-08 49.0 3.1 85 16-106 18-121 (168)
488 PF01210 NAD_Gly3P_dh_N: NAD-d 96.2 0.0051 1.1E-07 48.0 3.4 75 20-97 1-79 (157)
489 PRK11559 garR tartronate semia 96.2 0.0096 2.1E-07 51.6 5.4 66 18-96 2-67 (296)
490 COG0373 HemA Glutamyl-tRNA red 96.2 0.016 3.4E-07 52.0 6.8 75 16-100 176-251 (414)
491 PRK12480 D-lactate dehydrogena 96.2 0.013 2.8E-07 51.6 6.2 66 15-97 143-208 (330)
492 PRK15182 Vi polysaccharide bio 96.2 0.0094 2E-07 54.4 5.4 78 17-99 5-88 (425)
493 PRK13304 L-aspartate dehydroge 96.1 0.016 3.5E-07 49.4 6.5 69 18-97 1-71 (265)
494 PRK05678 succinyl-CoA syntheta 96.1 0.31 6.6E-06 42.1 14.3 88 18-135 8-99 (291)
495 PRK01710 murD UDP-N-acetylmura 96.1 0.042 9.1E-07 50.8 9.7 76 17-98 13-88 (458)
496 PRK06130 3-hydroxybutyryl-CoA 96.1 0.014 3.1E-07 50.9 6.3 35 18-53 4-38 (311)
497 KOG1198|consensus 96.1 0.02 4.4E-07 50.7 7.2 75 17-98 157-236 (347)
498 PRK02705 murD UDP-N-acetylmura 96.1 0.036 7.8E-07 51.3 9.2 78 20-98 2-79 (459)
499 COG2099 CobK Precorrin-6x redu 96.1 0.076 1.7E-06 44.1 9.9 93 18-128 2-96 (257)
500 PRK12833 acetyl-CoA carboxylas 96.1 0.059 1.3E-06 50.0 10.5 72 17-94 4-84 (467)
No 1
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=7.6e-41 Score=274.96 Aligned_cols=269 Identities=17% Similarity=0.113 Sum_probs=217.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~ 96 (303)
|+||||||+||||+|.+.+|++.|++|++++.-.....+.+... .++++++|+.|.+.+.++|+. +|+|||+|+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa 76 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFAA 76 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence 68999999999999999999999999999988655544443221 168999999999999999986 999999999
Q ss_pred cC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233 97 RE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE 166 (303)
Q Consensus 97 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~ 166 (303)
.. +.+.|..+++.|+.++.+|+++++++++++|||.||..+||.+ |+.|..|.+||+++|++.|+++++.
T Consensus 77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~ 156 (329)
T COG1087 77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDA 156 (329)
T ss_pred ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHH
Confidence 63 3467889999999999999999999999999999999999984 5667789999999999999999885
Q ss_pred ----CCCEEEEeecceeeCCC---------chhhHHHHHHHh---hhcceeeecCC------CceeeCceeHHHHHHHHH
Q psy4233 167 ----FPEATIFRPSDMYGSGD---------KFLRYYGHMWRH---VFRKLAVYKKG------EETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 167 ----~~~~~ilrp~~~~G~~~---------~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~i~~~Dva~~~~ 224 (303)
+++++++|-.++-|... .-..++...+.. +...+.++|+. ... |||||+.|+|++.+
T Consensus 157 ~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~i-RDYIHV~DLA~aH~ 235 (329)
T COG1087 157 AKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCI-RDYIHVDDLADAHV 235 (329)
T ss_pred HHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCee-eeeeehhHHHHHHH
Confidence 79999999999988311 112233322222 55667787743 445 99999999999999
Q ss_pred HHhcC--CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233 225 AACKD--PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM 293 (303)
Q Consensus 225 ~~~~~--~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~ 293 (303)
.+++. .....++||+++|..+|..|+++.+.++.|++.+. +.+++..-| -..+.......+.++|.|.
T Consensus 236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDp-a~l~Ad~~kA~~~Lgw~p~ 306 (329)
T COG1087 236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDP-AILVADSSKARQILGWQPT 306 (329)
T ss_pred HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCCCC-ceeEeCHHHHHHHhCCCcc
Confidence 98864 22223599999999999999999999999999887 667776555 4555555666777777766
No 2
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.7e-40 Score=271.60 Aligned_cols=243 Identities=18% Similarity=0.160 Sum_probs=213.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCC-CcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGN-FYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVIN 93 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~ 93 (303)
|++|||||.||||+++++.++++. .+|+.++.-. ....+.+....+.++..++++|+.|.+.+.++++. +|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 689999999999999999999986 4577776632 23334444455567899999999999999999995 999999
Q ss_pred ccccCc----cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCC--------CCCCCCCCCCchhHHHHHHH
Q psy4233 94 LIGREF----ATKNFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPN--------PPTYYISGGSQFYRTKYQGE 160 (303)
Q Consensus 94 ~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~--------~~~~~~~~~~~y~~~K~~~e 160 (303)
.|+.+. ...|+.+.++|+.|+.+|++++++...+ ||+++||-.|||+ +|.+|.+|.+||+.||+.++
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 999743 3578899999999999999999998864 9999999999987 26778999999999999999
Q ss_pred HHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233 161 KEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234 (303)
Q Consensus 161 ~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g 234 (303)
.+++++ |++++|.|+++-|||.+.+-.+++.++.. .++.+|++|+|.+. +||+|++|-++|+-.++.+... |
T Consensus 161 ~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~i-RDWl~VeDh~~ai~~Vl~kg~~-G 238 (340)
T COG1088 161 LLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQI-RDWLYVEDHCRAIDLVLTKGKI-G 238 (340)
T ss_pred HHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcce-eeeEEeHhHHHHHHHHHhcCcC-C
Confidence 998885 89999999999999999877777776655 88999999999999 9999999999999999987655 9
Q ss_pred cEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233 235 KIYQAVGPKRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 235 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 263 (303)
++||++++...+..|+++.|++.+|+..+
T Consensus 239 E~YNIgg~~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 239 ETYNIGGGNERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred ceEEeCCCccchHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999998766
No 3
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=100.00 E-value=1.9e-39 Score=287.50 Aligned_cols=244 Identities=15% Similarity=0.079 Sum_probs=196.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----hc--CCCCceEEEecCCCCHHHHHHHhcccC
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----LC--GDLGQVLFQPYHPRNDDEIRKAIKYSN 89 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~D 89 (303)
+.+|+|||||||||||++|+++|+++|++|++++|........+. .. ....+++++.+|+.|.+.+..+++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 356899999999999999999999999999999986432211111 00 011358899999999999999999999
Q ss_pred EEEEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHH
Q psy4233 90 VVINLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQG 159 (303)
Q Consensus 90 ~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~ 159 (303)
+|||+|+... ...+....++|+.++.+++++|++.++++|||+||..+|+.. ++.+..|.++|+.+|.++
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN 172 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence 9999998632 245567899999999999999999999999999999999853 223456778999999999
Q ss_pred HHHHHhh----CCCEEEEeecceeeCCCchh----hHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 160 EKEVLRE----FPEATIFRPSDMYGSGDKFL----RYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 160 e~~~~~~----~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
|.+++.+ +++++++||+.+|||++... ..+..++.+ .++.+.++++|.+. ++|+|++|+|++++.++..
T Consensus 173 e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~-rd~i~v~D~a~a~~~~~~~ 251 (348)
T PRK15181 173 ELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTS-RDFCYIENVIQANLLSATT 251 (348)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCce-EeeEEHHHHHHHHHHHHhc
Confidence 9987653 79999999999999975321 233344332 45677888888888 8999999999999987754
Q ss_pred CC--CCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 230 PD--AAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 230 ~~--~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
.. ..+++||+++++.+|+.|+++.+.+.++.
T Consensus 252 ~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 252 NDLASKNKVYNVAVGDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred ccccCCCCEEEecCCCcEeHHHHHHHHHHHhCc
Confidence 32 24679999999999999999999999973
No 4
>KOG2865|consensus
Probab=100.00 E-value=4.2e-39 Score=261.20 Aligned_cols=286 Identities=53% Similarity=0.865 Sum_probs=257.1
Q ss_pred cccccCCCCcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH
Q psy4233 4 VHLKKGTGGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK 83 (303)
Q Consensus 4 ~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 83 (303)
+.+++|+|+|+|.++-.+.|.|||||+|..++.+|.+.|.+|++--|..+....+++..+++.++-+...|+.|++++++
T Consensus 47 a~~kkGtGGRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~ 126 (391)
T KOG2865|consen 47 AAMKKGTGGRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRA 126 (391)
T ss_pred hhccCCCCCcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHH
Confidence 45788999999999999999999999999999999999999999999888888888988999999999999999999999
Q ss_pred HhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHH
Q psy4233 84 AIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV 163 (303)
Q Consensus 84 ~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~ 163 (303)
+++..++|||+.|...+.....+.++|..+++.|++.|+++|++|+|++|+.++-- ...+.|-++|...|..+
T Consensus 127 vvk~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv-------~s~Sr~LrsK~~gE~aV 199 (391)
T KOG2865|consen 127 VVKHSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV-------KSPSRMLRSKAAGEEAV 199 (391)
T ss_pred HHHhCcEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccc-------cChHHHHHhhhhhHHHH
Confidence 99999999999999877777889999999999999999999999999999988442 55688999999999999
Q ss_pred HhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233 164 LREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243 (303)
Q Consensus 164 ~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~ 243 (303)
++.....+|+||+.+||..+.+++.+..+|+ +.+.+|+++.|....-+++++-|||.+|+.+++.+.+.|++|.+.+++
T Consensus 200 rdafPeAtIirPa~iyG~eDrfln~ya~~~r-k~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~ 278 (391)
T KOG2865|consen 200 RDAFPEATIIRPADIYGTEDRFLNYYASFWR-KFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPD 278 (391)
T ss_pred HhhCCcceeechhhhcccchhHHHHHHHHHH-hcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCc
Confidence 9999999999999999999999999999998 688999999997776899999999999999999998899999999999
Q ss_pred ccCHHHHHHHHHHHhcCCCCCcccccccCCCCChhhHHHHhhccC--CCCCCCCCCcccccC
Q psy4233 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF--PGYPMGHLTPERVER 303 (303)
Q Consensus 244 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~p~~~~~~~l~~~~--~~~~~~~~~~~~~~~ 303 (303)
-+++.|+++++-+....-... ...| +|.+...+...+++ |..|..|+++|++++
T Consensus 279 ~yql~eLvd~my~~~~~~~ry-----~r~~-mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~ 334 (391)
T KOG2865|consen 279 RYQLSELVDIMYDMAREWPRY-----VRLP-MPIFKAMAAARDFMIVPFPPPSPLNRDQIER 334 (391)
T ss_pred hhhHHHHHHHHHHHHhhcccc-----ccCC-cHHHHHHHhhhheeecCCCCCCCCCHHHhhh
Confidence 999999999999988763321 2356 67777777777765 555666688888875
No 5
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=100.00 E-value=1.8e-38 Score=271.39 Aligned_cols=238 Identities=19% Similarity=0.190 Sum_probs=192.0
Q ss_pred EEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccCc
Q psy4233 22 TVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREF 99 (303)
Q Consensus 22 lVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~ 99 (303)
|||||+||||++|+++|+++| ++|+++++........ .....+..+++++|++|++++.++++++|+|||+|+...
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~ 78 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP 78 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence 699999999999999999999 7999999876543311 111123345999999999999999999999999998643
Q ss_pred c---ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC----------CCCC--CCCCCCchhHHHHHHHHHHH
Q psy4233 100 A---TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN----------PPTY--YISGGSQFYRTKYQGEKEVL 164 (303)
Q Consensus 100 ~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~----------~~~~--~~~~~~~y~~~K~~~e~~~~ 164 (303)
. ...+.++++|+.++++|+++|++.+++++||+||.+++.. +|.. +....+.|+.+|.++|+++.
T Consensus 79 ~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~ 158 (280)
T PF01073_consen 79 PWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVL 158 (280)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHH
Confidence 3 3456799999999999999999999999999999998654 1222 23456789999999999998
Q ss_pred hh-C--------CCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC-----
Q psy4233 165 RE-F--------PEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD----- 229 (303)
Q Consensus 165 ~~-~--------~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~----- 229 (303)
+. + +..++|||+.+|||++.. ...+....+ .+...+..+++... .+++|++|+|.+++.+.+.
T Consensus 159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~-~g~~~~~~g~~~~~-~~~vyV~NvA~ahvlA~~~L~~~~ 236 (280)
T PF01073_consen 159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVR-SGLFLFQIGDGNNL-FDFVYVENVAHAHVLAAQALLEPG 236 (280)
T ss_pred hhcccccccccceeEEEEeccEEeCcccccccchhhHHHH-hcccceeecCCCce-ECcEeHHHHHHHHHHHHHHhcccc
Confidence 75 3 689999999999998753 333334433 34355667776666 8999999999999887642
Q ss_pred --CCCCCcEEEEeCCcccC-HHHHHHHHHHHhcCCCC
Q psy4233 230 --PDAAGKIYQAVGPKRYL-LSELLDWFHVVMKKGEP 263 (303)
Q Consensus 230 --~~~~g~~~~i~~~~~~s-~~e~~~~i~~~~g~~~~ 263 (303)
....|+.|++++++++. +.|+...+.+.+|.+.+
T Consensus 237 ~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~ 273 (280)
T PF01073_consen 237 KPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPP 273 (280)
T ss_pred ccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCC
Confidence 34589999999999998 99999999999999866
No 6
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=100.00 E-value=3.5e-37 Score=278.54 Aligned_cols=266 Identities=18% Similarity=0.135 Sum_probs=199.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR 97 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~ 97 (303)
.|||||||||||||++|+++|+++|++|++++|......+........++++++.+|+.+.. +.++|+|||+|+.
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~~~~D~ViHlAa~ 194 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----LLEVDQIYHLACP 194 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----ccCCCEEEECcee
Confidence 57999999999999999999999999999999854322221111111246889999987653 4679999999985
Q ss_pred Cc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CC-----CCCCCCCchhHHHHHHHHH
Q psy4233 98 EF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PT-----YYISGGSQFYRTKYQGEKE 162 (303)
Q Consensus 98 ~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~-----~~~~~~~~y~~~K~~~e~~ 162 (303)
.. ...+...++.|+.++.+|+++|++.++ ++|++||..+|+.. |+ .|..+.+.|+.+|..+|++
T Consensus 195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~ 273 (436)
T PLN02166 195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL 273 (436)
T ss_pred ccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHH
Confidence 32 235667889999999999999999986 89999999999853 22 2455677899999999998
Q ss_pred HHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233 163 VLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234 (303)
Q Consensus 163 ~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g 234 (303)
++.+ +++++++||+++|||+... ...+..++.. .++.+.+++++.+. ++|+|++|+|++++.+++.+ . +
T Consensus 274 ~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~-rdfi~V~Dva~ai~~~~~~~-~-~ 350 (436)
T PLN02166 274 AMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQT-RSFQYVSDLVDGLVALMEGE-H-V 350 (436)
T ss_pred HHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeE-EeeEEHHHHHHHHHHHHhcC-C-C
Confidence 8764 7999999999999997431 1223333322 45677788888887 89999999999999998753 3 4
Q ss_pred cEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233 235 KIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM 293 (303)
Q Consensus 235 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~ 293 (303)
.+||+++++.+|+.|+++.+++.+|.+..+ +.+.....+ .........+.+.++|.|-
T Consensus 351 giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~-~~~~~d~~Ka~~~LGw~P~ 409 (436)
T PLN02166 351 GPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDP-HKRKPDISKAKELLNWEPK 409 (436)
T ss_pred ceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCc-cccccCHHHHHHHcCCCCC
Confidence 599999999999999999999999987654 333322222 1222233345566677665
No 7
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=100.00 E-value=8.3e-37 Score=272.22 Aligned_cols=266 Identities=15% Similarity=0.103 Sum_probs=203.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
..|+|||||||||||++++++|+++||+|++++|......... ...++++.+|+.|.+.+..++.++|+|||+|+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----MFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----cccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 5789999999999999999999999999999998643211110 11367899999999999998899999999997
Q ss_pred cCc-----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC----------C--CCCCCCCchhHHHHHH
Q psy4233 97 REF-----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP----------T--YYISGGSQFYRTKYQG 159 (303)
Q Consensus 97 ~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~----------~--~~~~~~~~y~~~K~~~ 159 (303)
... ...+....+.|+.++.+|+++|++.++++|||+||..+|+... + .|..|.++|+.+|..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~ 174 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 174 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHH
Confidence 532 1234456778999999999999999999999999999987521 1 1556788999999999
Q ss_pred HHHHHh----hCCCEEEEeecceeeCCCch-------h-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 160 EKEVLR----EFPEATIFRPSDMYGSGDKF-------L-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 160 e~~~~~----~~~~~~ilrp~~~~G~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
|+++.. ++++++++||+++|||+..+ . ..+..++. ....+++++++.+. ++|+|++|++++++.++
T Consensus 175 E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~g~g~~~-r~~i~v~D~a~ai~~~~ 252 (370)
T PLN02695 175 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALT-STDEFEMWGDGKQT-RSFTFIDECVEGVLRLT 252 (370)
T ss_pred HHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHc-CCCCeEEeCCCCeE-EeEEeHHHHHHHHHHHH
Confidence 998766 48999999999999996532 1 12222222 34678888998888 89999999999999988
Q ss_pred cCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233 228 KDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM 293 (303)
Q Consensus 228 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~ 293 (303)
+++ . +++||+++++.+|+.|+++.+++.+|.+.++ +.+.....+ ........+.+.++|.|.
T Consensus 253 ~~~-~-~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~--~~~~d~sk~~~~lgw~p~ 315 (370)
T PLN02695 253 KSD-F-REPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEGVR--GRNSDNTLIKEKLGWAPT 315 (370)
T ss_pred hcc-C-CCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCCcc--ccccCHHHHHHhcCCCCC
Confidence 754 2 5699999999999999999999999976554 111111111 222333356666777665
No 8
>PLN02572 UDP-sulfoquinovose synthase
Probab=100.00 E-value=7.8e-37 Score=277.43 Aligned_cols=251 Identities=17% Similarity=0.164 Sum_probs=192.7
Q ss_pred CCcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc------c----------cchhc--CCCCceEEEe
Q psy4233 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV------R----------DLRLC--GDLGQVLFQP 72 (303)
Q Consensus 11 ~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~------~----------~~~~~--~~~~~~~~~~ 72 (303)
+.....++|+|||||||||||++|+++|+++|++|++++|...... + .+... ....+++++.
T Consensus 40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~ 119 (442)
T PLN02572 40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV 119 (442)
T ss_pred CCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence 3344467899999999999999999999999999999875321110 0 00000 0013589999
Q ss_pred cCCCCHHHHHHHhcc--cCEEEEccccCcc----cc---chhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCCCC
Q psy4233 73 YHPRNDDEIRKAIKY--SNVVINLIGREFA----TK---NFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPNPP 142 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~--~D~vi~~a~~~~~----~~---~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~~~ 142 (303)
+|+.|.+.+.+++++ +|+|||+|+.... .. ....+++|+.++.+++++|++.+++ ++|++||..+|+...
T Consensus 120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~ 199 (442)
T PLN02572 120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN 199 (442)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC
Confidence 999999999999985 8999999975221 11 2345689999999999999999985 999999999998531
Q ss_pred ----------------C---CCCCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--------------
Q psy4233 143 ----------------T---YYISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF-------------- 185 (303)
Q Consensus 143 ----------------~---~~~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~-------------- 185 (303)
+ .|..|.++|+.+|.++|.+++.+ +++++++||+++|||++..
T Consensus 200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~ 279 (442)
T PLN02572 200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD 279 (442)
T ss_pred CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence 1 24567789999999999988664 8999999999999997532
Q ss_pred ---hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC--cEEEEeCCcccCHHHHHHHHHHH-
Q psy4233 186 ---LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG--KIYQAVGPKRYLLSELLDWFHVV- 257 (303)
Q Consensus 186 ---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g--~~~~i~~~~~~s~~e~~~~i~~~- 257 (303)
...+..++.+ .++.+.++|+|.+. ++|+|++|+|++++.++++....| ++||+++ +.+|+.|+++.+++.
T Consensus 280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~-Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~ 357 (442)
T PLN02572 280 GVFGTALNRFCVQAAVGHPLTVYGKGGQT-RGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAG 357 (442)
T ss_pred cchhhHHHHHHHHHhcCCCceecCCCCEE-ECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHH
Confidence 1233333332 45567788999988 899999999999999998643334 5899975 679999999999999
Q ss_pred --hcCCCC
Q psy4233 258 --MKKGEP 263 (303)
Q Consensus 258 --~g~~~~ 263 (303)
+|.+..
T Consensus 358 ~~~g~~~~ 365 (442)
T PLN02572 358 EKLGLDVE 365 (442)
T ss_pred HhhCCCCC
Confidence 886654
No 9
>PLN02427 UDP-apiose/xylose synthase
Probab=100.00 E-value=9.6e-37 Score=274.06 Aligned_cols=245 Identities=20% Similarity=0.252 Sum_probs=190.6
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIKYSNV 90 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~D~ 90 (303)
...++|+|||||||||||++|+++|+++ |++|++++|+........... ...++++++.+|+.|.+.+.++++++|+
T Consensus 10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ 89 (386)
T PLN02427 10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADL 89 (386)
T ss_pred CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence 3456789999999999999999999998 599999998643221111000 1124699999999999999999999999
Q ss_pred EEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCC--------------
Q psy4233 91 VINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYI-------------- 146 (303)
Q Consensus 91 vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~-------------- 146 (303)
|||+|+.... ..+......|+.++.+++++|++.+ ++|||+||..+|+.. ++.|.
T Consensus 90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~ 168 (386)
T PLN02427 90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES 168 (386)
T ss_pred EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence 9999986322 2344566789999999999999887 799999999999752 12221
Q ss_pred --------CCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch-----------hhHHHHHHHh--hhccee
Q psy4233 147 --------SGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF-----------LRYYGHMWRH--VFRKLA 201 (303)
Q Consensus 147 --------~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~-----------~~~~~~~~~~--~~~~~~ 201 (303)
.+.+.|+.+|..+|+++..+ +++++++||+++|||+... ...+..++.. .++.+.
T Consensus 169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (386)
T PLN02427 169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLK 248 (386)
T ss_pred ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeE
Confidence 12357999999999998763 7999999999999997431 1122222222 456677
Q ss_pred eecCCCceeeCceeHHHHHHHHHHHhcCCC-CCCcEEEEeCC-cccCHHHHHHHHHHHhcC
Q psy4233 202 VYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVGP-KRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 202 ~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~ 260 (303)
+++++.+. ++|+|++|+|++++.+++++. ..+++||++++ +.+|+.|+++.+.+.+|.
T Consensus 249 ~~g~g~~~-r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 249 LVDGGQSQ-RTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred EECCCCce-ECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 78887777 899999999999999998753 35779999987 589999999999999985
No 10
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=100.00 E-value=3.9e-36 Score=267.43 Aligned_cols=242 Identities=16% Similarity=0.163 Sum_probs=191.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc--cchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--DLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVIN 93 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~ 93 (303)
|++|||||||||||++++++|+++|++++++.++...... .+.......+++++.+|+.|.+++.+++++ +|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 4799999999999999999999999876654443222111 111101113588999999999999999985 899999
Q ss_pred ccccCcc----ccchhhhhhhcchHHHHHHHHHh---------cCCceEEEEecCccCCC--------CCCCCCCCCCch
Q psy4233 94 LIGREFA----TKNFTIADANVEIPARLARLSKE---------MGVEKFIHISALNADPN--------PPTYYISGGSQF 152 (303)
Q Consensus 94 ~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~---------~~~~~~v~~Ss~~~~~~--------~~~~~~~~~~~y 152 (303)
+|+.... ..+..+.++|+.++.+++++|++ .+++++|++||.++|+. +|+.+..|.+.|
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y 160 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY 160 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence 9986432 24567899999999999999986 35679999999999874 234466678899
Q ss_pred hHHHHHHHHHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 153 ~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
+.+|..+|.+++.+ +++++++||+.+|||+......+..++.. .+..++++++|.+. ++|+|++|+|++++.+
T Consensus 161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-~~~i~v~D~a~a~~~~ 239 (355)
T PRK10217 161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQI-RDWLYVEDHARALYCV 239 (355)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCee-eCcCcHHHHHHHHHHH
Confidence 99999999988753 78999999999999986433333333332 45567888888888 8999999999999999
Q ss_pred hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233 227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261 (303)
Q Consensus 227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 261 (303)
++.+. .+++||+++++.+|+.|+++.+++.+|+.
T Consensus 240 ~~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 240 ATTGK-VGETYNIGGHNERKNLDVVETICELLEEL 273 (355)
T ss_pred HhcCC-CCCeEEeCCCCcccHHHHHHHHHHHhccc
Confidence 98643 46799999999999999999999999864
No 11
>PLN02206 UDP-glucuronate decarboxylase
Probab=100.00 E-value=4e-36 Score=272.08 Aligned_cols=267 Identities=16% Similarity=0.124 Sum_probs=198.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
..|||||||||||||++|+++|+++|++|++++|......+........++++++.+|+.+.. +.++|+|||+|+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViHlAa 192 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYHLAC 192 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hcCCCEEEEeee
Confidence 368999999999999999999999999999998753322221111111246889999987653 457999999998
Q ss_pred cCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC------C-----CCCCCCCchhHHHHHHHH
Q psy4233 97 REF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP------T-----YYISGGSQFYRTKYQGEK 161 (303)
Q Consensus 97 ~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~------~-----~~~~~~~~y~~~K~~~e~ 161 (303)
... ...+...+++|+.++.+|+++|++.++ ++|++||..+|+... + .|..+.+.|+.+|..+|+
T Consensus 193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~ 271 (442)
T PLN02206 193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET 271 (442)
T ss_pred ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence 532 235678889999999999999999996 999999999997532 1 133446789999999999
Q ss_pred HHHh----hCCCEEEEeecceeeCCCc--hhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233 162 EVLR----EFPEATIFRPSDMYGSGDK--FLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA 233 (303)
Q Consensus 162 ~~~~----~~~~~~ilrp~~~~G~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~ 233 (303)
++.. .+++++++||+++|||+.. ....+..++.+ .++.+.++++|.+. ++|+|++|+|++++.+++++ .
T Consensus 272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~-rdfi~V~Dva~ai~~a~e~~-~- 348 (442)
T PLN02206 272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT-RSFQFVSDLVEGLMRLMEGE-H- 348 (442)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEE-EeEEeHHHHHHHHHHHHhcC-C-
Confidence 8875 3799999999999999742 11223333332 45677888888888 89999999999999998754 3
Q ss_pred CcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233 234 GKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM 293 (303)
Q Consensus 234 g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~ 293 (303)
+..||+++++.+|+.|+++.+.+.+|.+..+ +.+.....+ .........+.+.++|.|.
T Consensus 349 ~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~-~~~~~d~sKa~~~LGw~P~ 408 (442)
T PLN02206 349 VGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDP-HKRKPDITKAKELLGWEPK 408 (442)
T ss_pred CceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCCc-cccccCHHHHHHHcCCCCC
Confidence 4499999999999999999999999876553 222221112 2223333455566676665
No 12
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=100.00 E-value=5.8e-36 Score=265.43 Aligned_cols=239 Identities=15% Similarity=0.151 Sum_probs=189.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCC-CHHHHHHHhcccCEEEEcc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR-NDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~D~vi~~a 95 (303)
||+|||||||||||++|+++|+++ |++|++++|+....... . ..++++++.+|+. +.+.+.++++++|+|||+|
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~---~-~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a 76 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL---V-NHPRMHFFEGDITINKEWIEYHVKKCDVILPLV 76 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh---c-cCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence 479999999999999999999986 69999999864321111 1 1245999999997 7788888889999999999
Q ss_pred ccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCC-CC------CCCCchhHHHHH
Q psy4233 96 GREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTY-YI------SGGSQFYRTKYQ 158 (303)
Q Consensus 96 ~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~-~~------~~~~~y~~~K~~ 158 (303)
+... ...+...+++|+.++.+++++|++.+ +++||+||..+|+.. ++. +. .|.++|+.+|..
T Consensus 77 a~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~ 155 (347)
T PRK11908 77 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQL 155 (347)
T ss_pred ccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHH
Confidence 8532 34567788999999999999999988 699999999998752 121 11 345689999999
Q ss_pred HHHHHHhh----CCCEEEEeecceeeCCCch--------hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 159 GEKEVLRE----FPEATIFRPSDMYGSGDKF--------LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 159 ~e~~~~~~----~~~~~ilrp~~~~G~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
+|++++.+ +++++++||+.+|||+... ...+..++.. .++.+.+.++|.+. ++|+|++|+|++++
T Consensus 156 ~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~-r~~i~v~D~a~a~~ 234 (347)
T PRK11908 156 MDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQK-RAFTDIDDGIDALM 234 (347)
T ss_pred HHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCcee-eccccHHHHHHHHH
Confidence 99998763 7999999999999997421 1233333332 45566777778877 89999999999999
Q ss_pred HHhcCCC--CCCcEEEEeCC-cccCHHHHHHHHHHHhcCCC
Q psy4233 225 AACKDPD--AAGKIYQAVGP-KRYLLSELLDWFHVVMKKGE 262 (303)
Q Consensus 225 ~~~~~~~--~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~ 262 (303)
.+++++. ..+++||++++ ..+|+.|+++.|.+.+|..+
T Consensus 235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~ 275 (347)
T PRK11908 235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP 275 (347)
T ss_pred HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc
Confidence 9998753 45789999987 47999999999999999643
No 13
>CHL00194 ycf39 Ycf39; Provisional
Probab=100.00 E-value=4.4e-36 Score=262.78 Aligned_cols=227 Identities=16% Similarity=0.142 Sum_probs=182.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
|+|+|||||||+|++++++|+++||+|++++|+.... ..+. ..+++++.+|+.|++++.++++++|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-~~l~----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-SFLK----EWGAELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-hhHh----hcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 5899999999999999999999999999999975322 1111 1369999999999999999999999999998753
Q ss_pred ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecce
Q psy4233 99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178 (303)
Q Consensus 99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~ 178 (303)
...+..+.++|+.++.+++++|++++++|||++||.++.. .+..+|..+|.++|+++++++++++++||+.+
T Consensus 76 -~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------~~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~ 147 (317)
T CHL00194 76 -PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------YPYIPLMKLKSDIEQKLKKSGIPYTIFRLAGF 147 (317)
T ss_pred -CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------cCCChHHHHHHHHHHHHHHcCCCeEEEeecHH
Confidence 2334567888999999999999999999999999976543 23367899999999999999999999999988
Q ss_pred eeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258 (303)
Q Consensus 179 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~ 258 (303)
|+.... ......+ ....+.+ +++.+. ++|||++|+|++++.++.++...+++||+++++.+|+.|+++.+++.+
T Consensus 148 ~~~~~~--~~~~~~~--~~~~~~~-~~~~~~-~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~ 221 (317)
T CHL00194 148 FQGLIS--QYAIPIL--EKQPIWI-TNESTP-ISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLS 221 (317)
T ss_pred hhhhhh--hhhhhhc--cCCceEe-cCCCCc-cCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHh
Confidence 853111 0111111 2223333 334445 799999999999999998766678899999999999999999999999
Q ss_pred cCCCCC
Q psy4233 259 KKGEPD 264 (303)
Q Consensus 259 g~~~~~ 264 (303)
|++..+
T Consensus 222 g~~~~~ 227 (317)
T CHL00194 222 GQKAKI 227 (317)
T ss_pred CCCCeE
Confidence 998663
No 14
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=100.00 E-value=2.9e-35 Score=255.39 Aligned_cols=220 Identities=19% Similarity=0.197 Sum_probs=177.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~ 96 (303)
|+||||||+||||++++++|+++| +|++++|... .+.+|+.|.+.+.+++++ +|+|||||+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 589999999999999999999999 7999888531 246899999999999884 899999999
Q ss_pred cCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233 97 REFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE 166 (303)
Q Consensus 97 ~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~ 166 (303)
.... ..+...+.+|+.++.+++++|++.++ ++||+||..+|+.. |+.+..|.++|+.+|.++|++++.+
T Consensus 64 ~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~ 142 (299)
T PRK09987 64 HTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH 142 (299)
T ss_pred cCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 7432 34566778999999999999999996 89999999998652 4556678899999999999999998
Q ss_pred CCCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecC--CCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233 167 FPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKK--GEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243 (303)
Q Consensus 167 ~~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~ 243 (303)
..+++++|++++|||+.. +...+...+. .++.++++++ +.+. ..+...+|++.++..++..... +++||+++++
T Consensus 143 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~-~~~~~~v~~d~~g~~~-~~~~~~d~~~~~~~~~~~~~~~-~giyni~~~~ 219 (299)
T PRK09987 143 CAKHLIFRTSWVYAGKGNNFAKTMLRLAK-EREELSVINDQFGAPT-GAELLADCTAHAIRVALNKPEV-AGLYHLVASG 219 (299)
T ss_pred CCCEEEEecceecCCCCCCHHHHHHHHHh-cCCCeEEeCCCcCCCC-CHHHHHHHHHHHHHHhhccCCC-CCeEEeeCCC
Confidence 889999999999999653 3333333222 4567788877 4444 3456677788888877764333 3499999999
Q ss_pred ccCHHHHHHHHHHHhc
Q psy4233 244 RYLLSELLDWFHVVMK 259 (303)
Q Consensus 244 ~~s~~e~~~~i~~~~g 259 (303)
.+|+.|+++.+.+.++
T Consensus 220 ~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 220 TTTWHDYAALVFEEAR 235 (299)
T ss_pred CccHHHHHHHHHHHHH
Confidence 9999999999988654
No 15
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=100.00 E-value=8e-35 Score=277.11 Aligned_cols=239 Identities=15% Similarity=0.137 Sum_probs=190.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHH-HHHHhcccCEEEEc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE-IRKAIKYSNVVINL 94 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~D~vi~~ 94 (303)
.+|+|||||||||||++|+++|+++ |++|++++|......... ..++++++.+|++|.+. +.++++++|+|||+
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~----~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHl 389 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL----GHPRFHFVEGDISIHSEWIEYHIKKCDVVLPL 389 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc----CCCceEEEeccccCcHHHHHHHhcCCCEEEEC
Confidence 4789999999999999999999986 799999999653321111 12468999999998665 56788899999999
Q ss_pred cccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCC-------CCCCchhHHHH
Q psy4233 95 IGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYI-------SGGSQFYRTKY 157 (303)
Q Consensus 95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~-------~~~~~y~~~K~ 157 (303)
|+... ...+...+++|+.++.+++++|++++ +++||+||..+|+.. |+.+. .+.+.|+.+|.
T Consensus 390 Aa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~ 468 (660)
T PRK08125 390 VAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ 468 (660)
T ss_pred ccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence 98643 23455688999999999999999998 799999999999852 22211 23457999999
Q ss_pred HHHHHHHhh----CCCEEEEeecceeeCCCch--------hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233 158 QGEKEVLRE----FPEATIFRPSDMYGSGDKF--------LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 158 ~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
.+|++++.+ +++++++||+++|||+... ...+..++.. .++.+.++++|.+. ++|+|++|+|+++
T Consensus 469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~-rd~i~v~Dva~a~ 547 (660)
T PRK08125 469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQK-RCFTDIRDGIEAL 547 (660)
T ss_pred HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCcee-eceeeHHHHHHHH
Confidence 999999764 7999999999999997532 1233444333 45567778888888 8999999999999
Q ss_pred HHHhcCCC--CCCcEEEEeCCc-ccCHHHHHHHHHHHhcCC
Q psy4233 224 VAACKDPD--AAGKIYQAVGPK-RYLLSELLDWFHVVMKKG 261 (303)
Q Consensus 224 ~~~~~~~~--~~g~~~~i~~~~-~~s~~e~~~~i~~~~g~~ 261 (303)
+.+++++. ..+++||+++++ .+|+.|+++.+.+.+|.+
T Consensus 548 ~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 548 FRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred HHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence 99998643 347799999986 799999999999999964
No 16
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=100.00 E-value=7.5e-35 Score=278.50 Aligned_cols=245 Identities=15% Similarity=0.189 Sum_probs=195.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHh--cccCE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI--KYSNV 90 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~ 90 (303)
.++|+|||||||||||++++++|+++ +++|++++|... .....+......++++++.+|+.|.+.+..++ .++|+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 45789999999999999999999998 689999987531 11111111112356999999999999888766 56999
Q ss_pred EEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC---------CCCCCCCCCchhHHH
Q psy4233 91 VINLIGREFA----TKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP---------PTYYISGGSQFYRTK 156 (303)
Q Consensus 91 vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~---------~~~~~~~~~~y~~~K 156 (303)
|||+|+.... ..+..++++|+.++.+++++|++.+ +++|||+||..+|+.. ++.+..|.++|+.+|
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK 163 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK 163 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence 9999997432 2345788999999999999999987 8999999999998753 333556788999999
Q ss_pred HHHHHHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 157 YQGEKEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 157 ~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
..+|++++.+ +++++++||+++|||++.....+..++.. .++.+++++++.+. ++|+|++|+|++++.++++.
T Consensus 164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~-r~~ihV~Dva~a~~~~l~~~ 242 (668)
T PLN02260 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNV-RSYLYCEDVAEAFEVVLHKG 242 (668)
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCce-EeeEEHHHHHHHHHHHHhcC
Confidence 9999998763 79999999999999986433333333222 45678888888887 89999999999999998754
Q ss_pred CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233 231 DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE 262 (303)
Q Consensus 231 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 262 (303)
..+++||+++++.+|+.|+++.+++.+|.+.
T Consensus 243 -~~~~vyni~~~~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 243 -EVGHVYNIGTKKERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred -CCCCEEEECCCCeeEHHHHHHHHHHHhCCCC
Confidence 3467999999999999999999999999764
No 17
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=100.00 E-value=1.5e-34 Score=256.56 Aligned_cols=242 Identities=15% Similarity=0.093 Sum_probs=188.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL 94 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~ 94 (303)
++|+||||||+||||+++++.|+++|++|++++|+...............+++++.+|++|.+++.+++++ +|+|||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 46899999999999999999999999999999987654322211111123578899999999999999886 6999999
Q ss_pred cccCc----cccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC-------CCCCCCCCCchhHHHHHHHHH
Q psy4233 95 IGREF----ATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP-------PTYYISGGSQFYRTKYQGEKE 162 (303)
Q Consensus 95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~-------~~~~~~~~~~y~~~K~~~e~~ 162 (303)
|+... ...+...+++|+.++.+++++++..+ ++++|++||..+|+.. ++.+..|.++|+.+|..+|.+
T Consensus 83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~ 162 (349)
T TIGR02622 83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELV 162 (349)
T ss_pred CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHH
Confidence 98532 23456788999999999999999877 7899999999988742 334556788999999999998
Q ss_pred HHhh-----------CCCEEEEeecceeeCCCch-hhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 163 VLRE-----------FPEATIFRPSDMYGSGDKF-LRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 163 ~~~~-----------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
++.+ +++++++||+.+|||++.. ...+..+++. .+..++ .+++.+. ++|+|++|+|++++.+++
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~-~~~g~~~-rd~i~v~D~a~a~~~~~~ 240 (349)
T TIGR02622 163 IASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVI-IRNPDAT-RPWQHVLEPLSGYLLLAE 240 (349)
T ss_pred HHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeE-ECCCCcc-cceeeHHHHHHHHHHHHH
Confidence 8763 7899999999999997522 2334444443 334444 4566777 899999999999998876
Q ss_pred CC----CCCCcEEEEeCC--cccCHHHHHHHHHHHhcC
Q psy4233 229 DP----DAAGKIYQAVGP--KRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 229 ~~----~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 260 (303)
.. ...+++||++++ ++++..|+++.+.+.++.
T Consensus 241 ~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~ 278 (349)
T TIGR02622 241 KLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG 278 (349)
T ss_pred HHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence 31 123569999874 689999999999988764
No 18
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=100.00 E-value=1.6e-34 Score=256.82 Aligned_cols=241 Identities=16% Similarity=0.170 Sum_probs=189.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL 94 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~ 94 (303)
|||||||||||||++++++|+++|++ |+++++... .............+++++.+|+.|.+++.+++++ +|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 58999999999999999999999975 555555321 1111111111124578899999999999999875 8999999
Q ss_pred cccCc----cccchhhhhhhcchHHHHHHHHHhc---------CCceEEEEecCccCCC----------------CCCCC
Q psy4233 95 IGREF----ATKNFTIADANVEIPARLARLSKEM---------GVEKFIHISALNADPN----------------PPTYY 145 (303)
Q Consensus 95 a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~----------------~~~~~ 145 (303)
|+... ...+..+.++|+.++.+++++|++. +++++|++||..+|+. .|+.+
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~ 160 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA 160 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence 98632 2346789999999999999999874 4679999999999874 13445
Q ss_pred CCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHH
Q psy4233 146 ISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDV 219 (303)
Q Consensus 146 ~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dv 219 (303)
..|.+.|+.+|..+|.+++.+ +++++++|++.+|||+......+..++.. .+..+++++++.+. ++|+|++|+
T Consensus 161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~v~v~D~ 239 (352)
T PRK10084 161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQI-RDWLYVEDH 239 (352)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeE-EeeEEHHHH
Confidence 678899999999999988753 79999999999999986433333333332 34567788888887 899999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233 220 AAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261 (303)
Q Consensus 220 a~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 261 (303)
|++++.+++++ ..+++||+++++.+|+.|+++.+++.+|+.
T Consensus 240 a~a~~~~l~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 240 ARALYKVVTEG-KAGETYNIGGHNEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred HHHHHHHHhcC-CCCceEEeCCCCcCcHHHHHHHHHHHhccc
Confidence 99999998864 346799999999999999999999999864
No 19
>PLN02240 UDP-glucose 4-epimerase
Probab=100.00 E-value=2.4e-34 Score=255.63 Aligned_cols=250 Identities=18% Similarity=0.181 Sum_probs=191.5
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc---cchh-c-CCCCceEEEecCCCCHHHHHHHhc--
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR---DLRL-C-GDLGQVLFQPYHPRNDDEIRKAIK-- 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~---~~~~-~-~~~~~~~~~~~Dl~d~~~~~~~~~-- 86 (303)
|++++++|+|||||||||++++++|+++|++|++++|....... .... . ....+++++.+|+.|++.+..+++
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 46778899999999999999999999999999999875432111 1111 0 012458899999999999999887
Q ss_pred ccCEEEEccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHH
Q psy4233 87 YSNVVINLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTK 156 (303)
Q Consensus 87 ~~D~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K 156 (303)
++|+|||+|+... ...+...++.|+.++.++++++++.+++++|++||.++|+. +|+.|..+.++|+.+|
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK 160 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTK 160 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 5899999998632 23455788999999999999999999999999999988874 2455667788999999
Q ss_pred HHHHHHHHhh-----CCCEEEEeecceeeCCCc---------hhhHHHHHHHh----hhcceeeec------CCCceeeC
Q psy4233 157 YQGEKEVLRE-----FPEATIFRPSDMYGSGDK---------FLRYYGHMWRH----VFRKLAVYK------KGEETIKQ 212 (303)
Q Consensus 157 ~~~e~~~~~~-----~~~~~ilrp~~~~G~~~~---------~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~ 212 (303)
..+|++++.+ +++++++|++.+||+... ....+..++.. ....+.+++ +|.+. ++
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~-~~ 239 (352)
T PLN02240 161 LFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGV-RD 239 (352)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEE-Ee
Confidence 9999998753 578899999999986321 11111111111 122455554 45666 89
Q ss_pred ceeHHHHHHHHHHHhcC----CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233 213 PVYVGDVAAAIVAACKD----PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD 264 (303)
Q Consensus 213 ~i~~~Dva~~~~~~~~~----~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 264 (303)
|+|++|+|++++.++.+ +...+++||+++++++|++|+++.+.+.+|++.++
T Consensus 240 ~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~ 295 (352)
T PLN02240 240 YIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPL 295 (352)
T ss_pred eEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCc
Confidence 99999999999988863 23345799999999999999999999999987664
No 20
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=100.00 E-value=3.4e-34 Score=250.82 Aligned_cols=242 Identities=18% Similarity=0.193 Sum_probs=191.5
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCc-ccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFY-DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL 94 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~ 94 (303)
+|+||||||+||++++++|+++| ++|++++|.... ..+........++++++.+|++|++++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 789998774221 111111111124688999999999999999987 9999999
Q ss_pred cccCcc----ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecCccCCC-------CCCCCCCCCCchhHHHHHHHHH
Q psy4233 95 IGREFA----TKNFTIADANVEIPARLARLSKEMGVE-KFIHISALNADPN-------PPTYYISGGSQFYRTKYQGEKE 162 (303)
Q Consensus 95 a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~-------~~~~~~~~~~~y~~~K~~~e~~ 162 (303)
|+.... ..+..++++|+.++.++++++++.+.+ ++|++||..+|+. .+..+..+.+.|+.+|..+|.+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 160 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL 160 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence 986322 345678899999999999999987543 8999999988874 2344556778899999999998
Q ss_pred HHh----hCCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcE
Q psy4233 163 VLR----EFPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKI 236 (303)
Q Consensus 163 ~~~----~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~ 236 (303)
++. .+++++++||+.+|||.......+..++.. .++.+++++++.+. ++|+|++|+|+++..++++. ..+++
T Consensus 161 ~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~D~a~~~~~~~~~~-~~~~~ 238 (317)
T TIGR01181 161 VRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQV-RDWLYVEDHCRAIYLVLEKG-RVGET 238 (317)
T ss_pred HHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceE-EeeEEHHHHHHHHHHHHcCC-CCCce
Confidence 875 379999999999999975433334333332 44567788888777 89999999999999999754 45679
Q ss_pred EEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233 237 YQAVGPKRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 237 ~~i~~~~~~s~~e~~~~i~~~~g~~~~ 263 (303)
||+++++++++.|+++.+.+.+|.+..
T Consensus 239 ~~~~~~~~~s~~~~~~~i~~~~~~~~~ 265 (317)
T TIGR01181 239 YNIGGGNERTNLEVVETILELLGKDED 265 (317)
T ss_pred EEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence 999999999999999999999997644
No 21
>PLN02214 cinnamoyl-CoA reductase
Probab=100.00 E-value=2.9e-34 Score=253.55 Aligned_cols=238 Identities=17% Similarity=0.174 Sum_probs=182.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-ch-hcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
++|+|||||||||||++++++|+++|++|++++|+....... +. .....++++++.+|+.|.+++.++++++|+|||+
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~ 88 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT 88 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence 467999999999999999999999999999999975432111 11 1111235889999999999999999999999999
Q ss_pred cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC-ccCCCC---------CCC------CCCCCCchhHHHHH
Q psy4233 95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL-NADPNP---------PTY------YISGGSQFYRTKYQ 158 (303)
Q Consensus 95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~~~~~~---------~~~------~~~~~~~y~~~K~~ 158 (303)
|+.. ...+...++.|+.++.+++++|++.+++++|++||. .+|+.. |+. +..+.++|+.+|..
T Consensus 89 A~~~-~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~ 167 (342)
T PLN02214 89 ASPV-TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMV 167 (342)
T ss_pred cCCC-CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHH
Confidence 9975 345677889999999999999999999999999996 467532 111 22356789999999
Q ss_pred HHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233 159 GEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA 232 (303)
Q Consensus 159 ~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~ 232 (303)
+|++++.+ +++++++||+++|||+... ...+..++....+..+.++ ... ++|||++|+|++++.+++++..
T Consensus 168 aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~--~~~-~~~i~V~Dva~a~~~al~~~~~ 244 (342)
T PLN02214 168 AEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA--NLT-QAYVDVRDVALAHVLVYEAPSA 244 (342)
T ss_pred HHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCC--CCC-cCeeEHHHHHHHHHHHHhCccc
Confidence 99998764 7999999999999997542 1111222221112222233 344 7999999999999999987544
Q ss_pred CCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 233 AGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 233 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
++.||+++ +.+++.|+++.+.+.++.
T Consensus 245 -~g~yn~~~-~~~~~~el~~~i~~~~~~ 270 (342)
T PLN02214 245 -SGRYLLAE-SARHRGEVVEILAKLFPE 270 (342)
T ss_pred -CCcEEEec-CCCCHHHHHHHHHHHCCC
Confidence 45899977 578999999999999963
No 22
>KOG1502|consensus
Probab=100.00 E-value=4.5e-34 Score=241.32 Aligned_cols=240 Identities=20% Similarity=0.176 Sum_probs=184.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccc--cch-hcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR--DLR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
++++|+|||||||||++|+++||++||.|++++|++.+... .+. +.+..++.+.+.+|+.|++++..++++||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 57899999999999999999999999999999998765322 222 333445699999999999999999999999999
Q ss_pred ccccCccccc--h-hhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC-----CCCCCC------------CCCch
Q psy4233 94 LIGREFATKN--F-TIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP-----PTYYIS------------GGSQF 152 (303)
Q Consensus 94 ~a~~~~~~~~--~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~-----~~~~~~------------~~~~y 152 (303)
+|.+..+... + +..+..++|++|++++|++.. |+|+|++||..+-..+ +..... ....|
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y 164 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY 164 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence 9998544322 3 799999999999999999998 9999999998875422 111111 12469
Q ss_pred hHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 153 ~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
..+|..+|+...++ +++.+.+.|+.|+||.... .......+....+....+ .+....|+|++|||.|.+.+
T Consensus 165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~---~n~~~~~VdVrDVA~AHv~a 241 (327)
T KOG1502|consen 165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY---PNFWLAFVDVRDVALAHVLA 241 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC---CCCceeeEeHHHHHHHHHHH
Confidence 99999999988775 6999999999999997543 111111111122223322 22224589999999999999
Q ss_pred hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233 227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261 (303)
Q Consensus 227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 261 (303)
++++.+.| .|.+.+.. .++.|+++.+.+.+...
T Consensus 242 ~E~~~a~G-Ryic~~~~-~~~~ei~~~l~~~~P~~ 274 (327)
T KOG1502|consen 242 LEKPSAKG-RYICVGEV-VSIKEIADILRELFPDY 274 (327)
T ss_pred HcCcccCc-eEEEecCc-ccHHHHHHHHHHhCCCC
Confidence 99888876 78776654 56999999999988654
No 23
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=100.00 E-value=3.5e-34 Score=253.64 Aligned_cols=241 Identities=13% Similarity=0.008 Sum_probs=189.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchh-cC-----CCCceEEEecCCCCHHHHHHHhcc--cC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRL-CG-----DLGQVLFQPYHPRNDDEIRKAIKY--SN 89 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~-~~-----~~~~~~~~~~Dl~d~~~~~~~~~~--~D 89 (303)
++|||||||||||++++++|+++|++|++++|+.... ...+.. .. ...+++++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999975421 111110 00 013589999999999999999985 69
Q ss_pred EEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCc---eEEEEecCccCCCC------CCCCCCCCCchhHHH
Q psy4233 90 VVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVE---KFIHISALNADPNP------PTYYISGGSQFYRTK 156 (303)
Q Consensus 90 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K 156 (303)
+|||+|+.... ..+....++|+.++.+++++|++.+++ ++||+||..+|+.. |+.|..|.++|+.+|
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 160 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK 160 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence 99999996322 234566788999999999999998863 89999999999852 455667889999999
Q ss_pred HHHHHHHHhh----CCCEEEEeecceeeCCCch---hhHHHHHHHh--hhc-ceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 157 YQGEKEVLRE----FPEATIFRPSDMYGSGDKF---LRYYGHMWRH--VFR-KLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 157 ~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
..+|.+++.+ ++++++.|+.++|||+... ...+...+.. .++ ...++|+|.+. ++|+|++|+|++++.+
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-rd~i~V~D~a~a~~~~ 239 (343)
T TIGR01472 161 LYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAK-RDWGHAKDYVEAMWLM 239 (343)
T ss_pred HHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccc-cCceeHHHHHHHHHHH
Confidence 9999998664 7889999999999986321 1222333322 222 33456888888 8999999999999999
Q ss_pred hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233 227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE 262 (303)
Q Consensus 227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 262 (303)
++++. ++.||+++++++|+.|+++.+++.+|++.
T Consensus 240 ~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~ 273 (343)
T TIGR01472 240 LQQDK--PDDYVIATGETHSVREFVEVSFEYIGKTL 273 (343)
T ss_pred HhcCC--CccEEecCCCceeHHHHHHHHHHHcCCCc
Confidence 98643 34899999999999999999999999754
No 24
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=100.00 E-value=9.9e-34 Score=250.35 Aligned_cols=245 Identities=18% Similarity=0.151 Sum_probs=185.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL 94 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~ 94 (303)
|+|+|||||||||++++++|+++|++|++++|............ ....+++++.+|++|.+++.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 58999999999999999999999999999877533222111100 011347889999999999999887 48999999
Q ss_pred cccCcc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCC-CCCCchhHHHHHHHHHH
Q psy4233 95 IGREFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYI-SGGSQFYRTKYQGEKEV 163 (303)
Q Consensus 95 a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~-~~~~~y~~~K~~~e~~~ 163 (303)
|+.... ..+...++.|+.++.++++++++.+++++|++||.++|+.. |+.|. .|.++|+.+|..+|+++
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~ 160 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence 986432 23457889999999999999999999999999999988742 33343 56789999999999998
Q ss_pred Hhh-----CCCEEEEeecceeeCCCc----------hhhHHHHHHHh---hhcceeeec------CCCceeeCceeHHHH
Q psy4233 164 LRE-----FPEATIFRPSDMYGSGDK----------FLRYYGHMWRH---VFRKLAVYK------KGEETIKQPVYVGDV 219 (303)
Q Consensus 164 ~~~-----~~~~~ilrp~~~~G~~~~----------~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~i~~~Dv 219 (303)
+.+ +++++++|++.+|||... ....+..+... ....+.+++ +|.+. ++|+|++|+
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~v~v~D~ 239 (338)
T PRK10675 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV-RDYIHVMDL 239 (338)
T ss_pred HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE-EeeEEHHHH
Confidence 763 578999999999986311 01112212111 122344444 45566 899999999
Q ss_pred HHHHHHHhcC--CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233 220 AAAIVAACKD--PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD 264 (303)
Q Consensus 220 a~~~~~~~~~--~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 264 (303)
|++++.+++. ....+++||+++++.+|+.|+++.+.+.+|++..+
T Consensus 240 a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~ 286 (338)
T PRK10675 240 ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNY 286 (338)
T ss_pred HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCe
Confidence 9999999874 22335799999999999999999999999987653
No 25
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=100.00 E-value=2.6e-33 Score=247.77 Aligned_cols=243 Identities=14% Similarity=0.026 Sum_probs=190.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhc-----CCCCceEEEecCCCCHHHHHHHhcc--
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLC-----GDLGQVLFQPYHPRNDDEIRKAIKY-- 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~-- 87 (303)
.++|+||||||+||||++++++|+++|++|++++|+.... ...+... ....+++++.+|+.|.+++.+++++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 3468999999999999999999999999999999865321 1111110 0113589999999999999998885
Q ss_pred cCEEEEccccCcc----ccchhhhhhhcchHHHHHHHHHhcCCc-----eEEEEecCccCCC-----CCCCCCCCCCchh
Q psy4233 88 SNVVINLIGREFA----TKNFTIADANVEIPARLARLSKEMGVE-----KFIHISALNADPN-----PPTYYISGGSQFY 153 (303)
Q Consensus 88 ~D~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~v~~Ss~~~~~~-----~~~~~~~~~~~y~ 153 (303)
+|+|||+|+.... ..+...+++|+.++.++++++++.+++ ++|++||.++|+. .|+.|..|.+.|+
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~ 163 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYA 163 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhH
Confidence 7999999996322 345567789999999999999998875 8999999999986 3455667888999
Q ss_pred HHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--h-hHHHHHHHh--hhcceee-ecCCCceeeCceeHHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--L-RYYGHMWRH--VFRKLAV-YKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 154 ~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~-~~~~~~~~~--~~~~~~~-~~~~~~~~~~~i~~~Dva~~~ 223 (303)
.+|..+|.+++.+ ++.++..|+.++|||+... . ..+..++.. .+...++ .|++.+. ++|+|++|+|+++
T Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~-rd~i~v~D~a~a~ 242 (340)
T PLN02653 164 VAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDAS-RDWGFAGDYVEAM 242 (340)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcce-ecceeHHHHHHHH
Confidence 9999999998664 6778889999999986432 1 222222221 2333444 4777877 8999999999999
Q ss_pred HHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233 224 VAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261 (303)
Q Consensus 224 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 261 (303)
+.+++++. ++.||+++++++|+.|+++.+++.+|.+
T Consensus 243 ~~~~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 243 WLMLQQEK--PDDYVVATEESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred HHHHhcCC--CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence 99998643 4589999999999999999999999964
No 26
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=247.23 Aligned_cols=236 Identities=22% Similarity=0.228 Sum_probs=191.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhccc-CEEEEcccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYS-NVVINLIGR 97 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-D~vi~~a~~ 97 (303)
|+|||||||||||++|+++|+++|++|++++|...+..... .+++++.+|+.|.+.......+. |+|||+|+.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~ 74 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQ 74 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEcccc
Confidence 35999999999999999999999999999999765443322 35889999999998888888888 999999997
Q ss_pred Cccc-----cchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------CC-CCCCCCCchhHHHHHHHHHHH
Q psy4233 98 EFAT-----KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------PT-YYISGGSQFYRTKYQGEKEVL 164 (303)
Q Consensus 98 ~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------~~-~~~~~~~~y~~~K~~~e~~~~ 164 (303)
.... .+..++++|+.++.+++++|++.+++++||+||.++++.. |+ .|..|.++|+.+|.++|+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~ 154 (314)
T COG0451 75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLR 154 (314)
T ss_pred CchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHH
Confidence 4322 2345899999999999999999999999998887766532 33 466676789999999999998
Q ss_pred hh----CCCEEEEeecceeeCCCchh---hHHHHHHHh--hhcc-eeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233 165 RE----FPEATIFRPSDMYGSGDKFL---RYYGHMWRH--VFRK-LAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234 (303)
Q Consensus 165 ~~----~~~~~ilrp~~~~G~~~~~~---~~~~~~~~~--~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g 234 (303)
.+ +++++++||+++|||+.... .....++.. .+.. +...+++... ++++|++|++++++.+++++...
T Consensus 155 ~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~~~~- 232 (314)
T COG0451 155 AYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQT-RDFVYVDDVADALLLALENPDGG- 232 (314)
T ss_pred HHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCcee-EeeEeHHHHHHHHHHHHhCCCCc-
Confidence 86 49999999999999986543 233322211 3333 5555566666 89999999999999999976553
Q ss_pred cEEEEeCCc-ccCHHHHHHHHHHHhcCCCC
Q psy4233 235 KIYQAVGPK-RYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 235 ~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~ 263 (303)
.||+++++ ..+..|+++.+.+.+|.+.+
T Consensus 233 -~~ni~~~~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 233 -VFNIGSGTAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred -EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence 99999997 89999999999999998865
No 27
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=100.00 E-value=4.7e-34 Score=239.64 Aligned_cols=215 Identities=27% Similarity=0.363 Sum_probs=181.0
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhccc--CEEEEccccC
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYS--NVVINLIGRE 98 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~vi~~a~~~ 98 (303)
|||||||||||++++++|+++|++|+.+.|+..+....... .+++++.+|+.|.+.+.+++++. |+|||+|+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 79999999999999999999999999999986654332221 15999999999999999999875 9999999974
Q ss_pred c----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhh--
Q psy4233 99 F----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLRE-- 166 (303)
Q Consensus 99 ~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~-- 166 (303)
. ...+...++.|+.++.++++++++.+++++|++||..+|+.. |+.+..+.++|+.+|...|++++.+
T Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~ 156 (236)
T PF01370_consen 77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAK 156 (236)
T ss_dssp SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2 245667889999999999999999999999999999999875 3334567788999999999999875
Q ss_pred --CCCEEEEeecceeeCC---CchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233 167 --FPEATIFRPSDMYGSG---DKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239 (303)
Q Consensus 167 --~~~~~ilrp~~~~G~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i 239 (303)
+++++++||+.+|||. ......+..++.. .++.+.+++++.+. ++|+|++|+|++++.+++++...+++||+
T Consensus 157 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~~~yNi 235 (236)
T PF01370_consen 157 KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQV-RDFIHVDDLAEAIVAALENPKAAGGIYNI 235 (236)
T ss_dssp HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCE-EEEEEHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCc-cceEEHHHHHHHHHHHHhCCCCCCCEEEe
Confidence 7999999999999998 3444444545444 55568889999997 89999999999999999988767889998
Q ss_pred e
Q psy4233 240 V 240 (303)
Q Consensus 240 ~ 240 (303)
+
T Consensus 236 g 236 (236)
T PF01370_consen 236 G 236 (236)
T ss_dssp S
T ss_pred C
Confidence 5
No 28
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=100.00 E-value=1.8e-33 Score=251.80 Aligned_cols=235 Identities=18% Similarity=0.188 Sum_probs=188.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcCCCCceEEEecCCCCHHHHHHHhc----cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIK----YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~ 88 (303)
.++|+|+|||||||||++++++|+++|++|++++|+....... .......++++++.+|++|++++.++++ ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 3577999999999999999999999999999999975432110 0011122569999999999999999988 59
Q ss_pred CEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh--h
Q psy4233 89 NVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR--E 166 (303)
Q Consensus 89 D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~--~ 166 (303)
|+||||++.... .....+++|+.++.++++++++.++++||++||.+++. +...|..+|...|+.++. .
T Consensus 138 D~Vi~~aa~~~~-~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------p~~~~~~sK~~~E~~l~~~~~ 208 (390)
T PLN02657 138 DVVVSCLASRTG-GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------PLLEFQRAKLKFEAELQALDS 208 (390)
T ss_pred cEEEECCccCCC-CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------cchHHHHHHHHHHHHHHhccC
Confidence 999999885322 22345678999999999999999999999999998763 346789999999999986 6
Q ss_pred CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCC-ccc
Q psy4233 167 FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP-KRY 245 (303)
Q Consensus 167 ~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~ 245 (303)
+++++++||+.+||+... .+ ..+. .++.+.++|+|...+.++||++|+|++++.++.++...+++||++++ +.+
T Consensus 209 gl~~tIlRp~~~~~~~~~---~~-~~~~-~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~ 283 (390)
T PLN02657 209 DFTYSIVRPTAFFKSLGG---QV-EIVK-DGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKAL 283 (390)
T ss_pred CCCEEEEccHHHhcccHH---HH-Hhhc-cCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCccc
Confidence 899999999999975322 11 1222 45566678888765346899999999999999766666889999986 689
Q ss_pred CHHHHHHHHHHHhcCCCCC
Q psy4233 246 LLSELLDWFHVVMKKGEPD 264 (303)
Q Consensus 246 s~~e~~~~i~~~~g~~~~~ 264 (303)
|+.|+++.+++.+|+++.+
T Consensus 284 S~~Eia~~l~~~lG~~~~~ 302 (390)
T PLN02657 284 TPLEQGEMLFRILGKEPKF 302 (390)
T ss_pred CHHHHHHHHHHHhCCCCce
Confidence 9999999999999998763
No 29
>PLN00198 anthocyanidin reductase; Provisional
Probab=100.00 E-value=2.7e-33 Score=247.54 Aligned_cols=245 Identities=14% Similarity=0.099 Sum_probs=180.8
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc--chhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD--LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
+++++++||||||+||||++++++|+++|++|++++|+....... .......++++++.+|++|.+++.++++++|+|
T Consensus 5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 84 (338)
T PLN00198 5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV 84 (338)
T ss_pred cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence 345688999999999999999999999999999998875432111 111111235899999999999999999999999
Q ss_pred EEccccCcc--ccch-hhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCCCC----------C---------CCCCC
Q psy4233 92 INLIGREFA--TKNF-TIADANVEIPARLARLSKEM-GVEKFIHISALNADPNPP----------T---------YYISG 148 (303)
Q Consensus 92 i~~a~~~~~--~~~~-~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~----------~---------~~~~~ 148 (303)
||+|+.... ..+. .++++|+.++.++++++.+. +++++|++||..+|+... + .+..|
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p 164 (338)
T PLN00198 85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP 164 (338)
T ss_pred EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence 999986322 2232 46789999999999999886 588999999999886321 1 12245
Q ss_pred CCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch-h-hHHHHHHHh-hhcceeeec-CCCce---eeCceeHH
Q psy4233 149 GSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF-L-RYYGHMWRH-VFRKLAVYK-KGEET---IKQPVYVG 217 (303)
Q Consensus 149 ~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~-~-~~~~~~~~~-~~~~~~~~~-~~~~~---~~~~i~~~ 217 (303)
.++|+.+|..+|.+++.+ +++++++||+++|||+... . ..+...... .++.+.+.+ .+.+. .++|+|++
T Consensus 165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~ 244 (338)
T PLN00198 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVE 244 (338)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHH
Confidence 678999999999988763 7999999999999997431 1 111111111 333444444 22221 16999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 218 DVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 218 Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
|+|++++.+++.+.. ++.| +++++.+|+.|+++.+.+.++.
T Consensus 245 D~a~a~~~~~~~~~~-~~~~-~~~~~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 245 DVCRAHIFLAEKESA-SGRY-ICCAANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred HHHHHHHHHhhCcCc-CCcE-EEecCCCCHHHHHHHHHHHCCC
Confidence 999999999987543 3468 5566779999999999998864
No 30
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=100.00 E-value=3.5e-33 Score=241.33 Aligned_cols=219 Identities=19% Similarity=0.241 Sum_probs=180.4
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEcccc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIGR 97 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~~ 97 (303)
||||||||||||++++++|+++|++|++++|+ .+|+.|.+++.+++++ +|+|||+++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------QLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------ccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 58999999999999999999999999999885 4688999999999987 4999999986
Q ss_pred Ccc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHhhC
Q psy4233 98 EFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLREF 167 (303)
Q Consensus 98 ~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~~~ 167 (303)
... ..+...+++|+.++.++++++++.+. ++|++||..+|+.. |+.+..+.++|+.+|..+|++++.++
T Consensus 61 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~ 139 (287)
T TIGR01214 61 TDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAAG 139 (287)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHhC
Confidence 432 23456789999999999999999886 89999999988652 34455677899999999999999999
Q ss_pred CCEEEEeecceeeCCC--chhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCccc
Q psy4233 168 PEATIFRPSDMYGSGD--KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245 (303)
Q Consensus 168 ~~~~ilrp~~~~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~ 245 (303)
.+++++||+++|||+. .+...+..... .++.+++.+ .+. ++++|++|+|++++.++.++...+++||+++++.+
T Consensus 140 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~-~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~ 215 (287)
T TIGR01214 140 PNALIVRTSWLYGGGGGRNFVRTMLRLAG-RGEELRVVD--DQI-GSPTYAKDLARVIAALLQRLARARGVYHLANSGQC 215 (287)
T ss_pred CCeEEEEeeecccCCCCCCHHHHHHHHhh-cCCCceEec--CCC-cCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCc
Confidence 9999999999999974 22222222222 334455554 344 78999999999999999875455779999999999
Q ss_pred CHHHHHHHHHHHhcCCCC
Q psy4233 246 LLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 246 s~~e~~~~i~~~~g~~~~ 263 (303)
|+.|+++.+++.+|++..
T Consensus 216 s~~e~~~~i~~~~~~~~~ 233 (287)
T TIGR01214 216 SWYEFAQAIFEEAGADGL 233 (287)
T ss_pred CHHHHHHHHHHHhCcccc
Confidence 999999999999998753
No 31
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=3.3e-33 Score=245.40 Aligned_cols=238 Identities=18% Similarity=0.190 Sum_probs=177.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc--chhc-CCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD--LRLC-GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
+++|||||||||||++++++|+++|++|++++|+....... +... ...++++++.+|+.|++.+..+++++|+|||+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 83 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT 83 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence 57999999999999999999999999999999975432111 1111 11246899999999999999999999999999
Q ss_pred cccCcc--ccch-hhhhhhcchHHHHHHHHHhc-CCceEEEEecCcc--CCCC---------CCCCCCC------CCchh
Q psy4233 95 IGREFA--TKNF-TIADANVEIPARLARLSKEM-GVEKFIHISALNA--DPNP---------PTYYISG------GSQFY 153 (303)
Q Consensus 95 a~~~~~--~~~~-~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~--~~~~---------~~~~~~~------~~~y~ 153 (303)
|+.... ..+. .++++|+.++.++++++.+. +++++||+||.++ |+.. |+.+..| .+.|+
T Consensus 84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~ 163 (322)
T PLN02662 84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYV 163 (322)
T ss_pred CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHH
Confidence 986422 2333 68899999999999999887 8899999999863 5421 1122222 25799
Q ss_pred HHHHHHHHHHHh----hCCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 154 RTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 154 ~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
.+|..+|++++. .+++++++||+.+|||+.... ......+.......+.+ +.+. ++|+|++|+|++++.+++
T Consensus 164 ~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~i~v~Dva~a~~~~~~ 240 (322)
T PLN02662 164 LSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTF--PNAS-YRWVDVRDVANAHIQAFE 240 (322)
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccC--CCCC-cCeEEHHHHHHHHHHHhc
Confidence 999999998765 489999999999999975321 11222221110111112 2344 799999999999999998
Q ss_pred CCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 229 DPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 229 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
++...+ .|++. ++.+|+.|+++.+.+.++.
T Consensus 241 ~~~~~~-~~~~~-g~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 241 IPSASG-RYCLV-ERVVHYSEVVKILHELYPT 270 (322)
T ss_pred CcCcCC-cEEEe-CCCCCHHHHHHHHHHHCCC
Confidence 765444 78886 5779999999999999874
No 32
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=8e-33 Score=243.23 Aligned_cols=238 Identities=18% Similarity=0.165 Sum_probs=179.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
++|+||||||+||||++++++|+++|++|++++|+......... ......+++++.+|++|.+++.++++++|+|||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 46899999999999999999999999999998887543221111 111124689999999999999999999999999
Q ss_pred ccccCc----cccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCC-----------CCCCCCCC------CCc
Q psy4233 94 LIGREF----ATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPN-----------PPTYYISG------GSQ 151 (303)
Q Consensus 94 ~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~-----------~~~~~~~~------~~~ 151 (303)
+|+... ...+...+++|+.++.++++++.+. ++++||++||..++.. +|+.+..| .++
T Consensus 84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 163 (325)
T PLN02989 84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW 163 (325)
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence 999632 1234567899999999999999875 5789999999877542 12223322 367
Q ss_pred hhHHHHHHHHHHHh----hCCCEEEEeecceeeCCCchh-hHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFL-RYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 152 y~~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
|+.+|..+|.+++. .+++++++||+.+|||+.... .....++.. ..+..+ ++ .+. ++|+|++|+|++++.
T Consensus 164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~--~~~-r~~i~v~Dva~a~~~ 239 (325)
T PLN02989 164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FN--TTH-HRFVDVRDVALAHVK 239 (325)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CC--CcC-cCeeEHHHHHHHHHH
Confidence 99999999998875 379999999999999976431 122222221 112222 22 234 689999999999999
Q ss_pred HhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 226 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
+++++.. ++.||++ ++.+|+.|+++.+.+.++.
T Consensus 240 ~l~~~~~-~~~~ni~-~~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 240 ALETPSA-NGRYIID-GPVVTIKDIENVLREFFPD 272 (325)
T ss_pred HhcCccc-CceEEEe-cCCCCHHHHHHHHHHHCCC
Confidence 9987554 4589995 5689999999999999974
No 33
>PLN02650 dihydroflavonol-4-reductase
Probab=100.00 E-value=8.6e-33 Score=245.49 Aligned_cols=241 Identities=15% Similarity=0.097 Sum_probs=177.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh---cCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL---CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI 92 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi 92 (303)
.+.++|||||||||||++++++|+++|++|++++|+.......... .....+++++.+|+.|.+.+.++++++|+||
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 3467999999999999999999999999999999975432211111 0111358899999999999999999999999
Q ss_pred EccccCcc--ccc-hhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC--------CCC---------CCCCCCc
Q psy4233 93 NLIGREFA--TKN-FTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP--------PTY---------YISGGSQ 151 (303)
Q Consensus 93 ~~a~~~~~--~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~--------~~~---------~~~~~~~ 151 (303)
|+|+.... ..+ ...+++|+.++.+++++|++.+ +++|||+||.++++.. |.. +..+.++
T Consensus 83 H~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 162 (351)
T PLN02650 83 HVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWM 162 (351)
T ss_pred EeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccch
Confidence 99986422 123 3678999999999999999887 7899999999765431 110 1123458
Q ss_pred hhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 152 y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
|+.+|..+|.+++.+ +++++++||+++|||+... ...+...+.........++. .+. ++|+|++|+|++++.
T Consensus 163 Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-r~~v~V~Dva~a~~~ 240 (351)
T PLN02650 163 YFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSI-IKQ-GQFVHLDDLCNAHIF 240 (351)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCc-CCC-cceeeHHHHHHHHHH
Confidence 999999999988653 7999999999999997532 11111111111111122222 223 699999999999999
Q ss_pred HhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 226 ACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 226 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
+++++...+ .| +++++.+|+.|+++.+.+.++.
T Consensus 241 ~l~~~~~~~-~~-i~~~~~~s~~el~~~i~~~~~~ 273 (351)
T PLN02650 241 LFEHPAAEG-RY-ICSSHDATIHDLAKMLREKYPE 273 (351)
T ss_pred HhcCcCcCc-eE-EecCCCcCHHHHHHHHHHhCcc
Confidence 998654434 78 6677889999999999998863
No 34
>PLN02686 cinnamoyl-CoA reductase
Probab=100.00 E-value=3.6e-33 Score=248.61 Aligned_cols=243 Identities=13% Similarity=0.046 Sum_probs=184.0
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc---C----CCCceEEEecCCCCHHHHHHHhc
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC---G----DLGQVLFQPYHPRNDDEIRKAIK 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~----~~~~~~~~~~Dl~d~~~~~~~~~ 86 (303)
.++++|+||||||+||||++++++|+++|++|++++|+.... +.+... + ...+++++.+|++|.+++.++++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~-~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDK-EKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 456789999999999999999999999999999988864321 111110 0 01258899999999999999999
Q ss_pred ccCEEEEccccCccc----cchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCc--cCCC--C--------CC------
Q psy4233 87 YSNVVINLIGREFAT----KNFTIADANVEIPARLARLSKEM-GVEKFIHISALN--ADPN--P--------PT------ 143 (303)
Q Consensus 87 ~~D~vi~~a~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~--~~~~--~--------~~------ 143 (303)
++|+|||+++..... ......+.|+.++.++++++++. +++|+||+||.. +|+. . ++
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 999999999864322 22456788999999999999986 799999999963 4542 1 11
Q ss_pred CCCCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHH
Q psy4233 144 YYISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVG 217 (303)
Q Consensus 144 ~~~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (303)
.+..+.++|+.+|..+|++++.+ +++++++||+++|||+... ...+...+ . +..+++++|. .+|+|++
T Consensus 208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~--~-g~~~~~g~g~---~~~v~V~ 281 (367)
T PLN02686 208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYL--K-GAQEMLADGL---LATADVE 281 (367)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHh--c-CCCccCCCCC---cCeEEHH
Confidence 12234568999999999998653 7999999999999997532 11122222 2 2355665543 4699999
Q ss_pred HHHHHHHHHhcCC--CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233 218 DVAAAIVAACKDP--DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD 264 (303)
Q Consensus 218 Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 264 (303)
|+|++++.+++.. ...+++| +++++.+++.|+++.+.+.+|.+...
T Consensus 282 Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~ 329 (367)
T PLN02686 282 RLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINK 329 (367)
T ss_pred HHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCc
Confidence 9999999999742 2345688 88889999999999999999987554
No 35
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.3e-32 Score=244.43 Aligned_cols=243 Identities=14% Similarity=0.091 Sum_probs=175.6
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
+.+.|+||||||+||||++++++|+++|++|++++|+...............+++++.+|+.|.+.+.++++++|+|||+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 45678999999999999999999999999999999875332211111111246899999999999999999999999999
Q ss_pred cccCcc------ccchhh-----hhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC-----------CC--CCC---
Q psy4233 95 IGREFA------TKNFTI-----ADANVEIPARLARLSKEMG-VEKFIHISALNADPNP-----------PT--YYI--- 146 (303)
Q Consensus 95 a~~~~~------~~~~~~-----~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~-----------~~--~~~--- 146 (303)
|+.... ..+..+ ++.|+.++.+++++|++.+ +++||++||.++|+.. |+ .|.
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~ 166 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV 166 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence 986432 123333 3445689999999998875 7899999999998631 11 111
Q ss_pred ----CCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeCCCch--hhHHHHHHHh-hhc--ceeeecCCCce---e
Q psy4233 147 ----SGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGSGDKF--LRYYGHMWRH-VFR--KLAVYKKGEET---I 210 (303)
Q Consensus 147 ----~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~-~~~--~~~~~~~~~~~---~ 210 (303)
.+.++|+.+|.++|+++..+ +++++++||+++|||+... ...+..++.. .+. ..+..+ +.+. .
T Consensus 167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~ 245 (353)
T PLN02896 167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILS-AVNSRMGS 245 (353)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccc-ccccccCc
Confidence 13358999999999988764 7999999999999997531 1112112111 111 112221 1111 1
Q ss_pred eCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 211 KQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 211 ~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
++|||++|+|++++.+++.+.. +..|+ ++++.+++.|+++.+++.++.
T Consensus 246 ~dfi~v~Dva~a~~~~l~~~~~-~~~~~-~~~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 246 IALVHIEDICDAHIFLMEQTKA-EGRYI-CCVDSYDMSELINHLSKEYPC 293 (353)
T ss_pred eeEEeHHHHHHHHHHHHhCCCc-CccEE-ecCCCCCHHHHHHHHHHhCCC
Confidence 5899999999999999986443 34785 567789999999999999974
No 36
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=8.8e-33 Score=242.65 Aligned_cols=236 Identities=18% Similarity=0.212 Sum_probs=177.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc--c-hhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD--L-RLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
+++|||||||||||++++++|+++|++|++++|+....... + ...+..++++++.+|++|.+.+.++++++|+|||+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~ 84 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT 84 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence 57999999999999999999999999999999975432111 1 11111246899999999999999999999999999
Q ss_pred cccCcc--ccc-hhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccC--CCC---------CCCCC------CCCCchh
Q psy4233 95 IGREFA--TKN-FTIADANVEIPARLARLSKEM-GVEKFIHISALNAD--PNP---------PTYYI------SGGSQFY 153 (303)
Q Consensus 95 a~~~~~--~~~-~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~--~~~---------~~~~~------~~~~~y~ 153 (303)
|+.... ..+ ...++.|+.++.+++++|++. +++|+|++||.+++ +.. |+.+. .+.+.|+
T Consensus 85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~ 164 (322)
T PLN02986 85 ASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYP 164 (322)
T ss_pred CCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchH
Confidence 986422 223 246889999999999999986 68999999998753 321 11111 1347799
Q ss_pred HHHHHHHHHHHh----hCCCEEEEeecceeeCCCchh-hHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFL-RYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|..+|.++++ ++++++++||+.+|||..... .....++.. .+.. .++ .+. ++|+|++|+|++++.+
T Consensus 165 ~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~--~~~--~~~-~~~v~v~Dva~a~~~a 239 (322)
T PLN02986 165 LSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN--LFN--NRF-YRFVDVRDVALAHIKA 239 (322)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC--CCC--CcC-cceeEHHHHHHHHHHH
Confidence 999999988776 479999999999999965321 111111111 2222 222 344 7899999999999999
Q ss_pred hcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 227 CKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 227 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
++++...+ .||++ ++.+|+.|+++.+.+.++.
T Consensus 240 l~~~~~~~-~yni~-~~~~s~~e~~~~i~~~~~~ 271 (322)
T PLN02986 240 LETPSANG-RYIID-GPIMSVNDIIDILRELFPD 271 (322)
T ss_pred hcCcccCC-cEEEe-cCCCCHHHHHHHHHHHCCC
Confidence 98765544 89994 5689999999999999874
No 37
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=100.00 E-value=1.4e-33 Score=242.63 Aligned_cols=220 Identities=25% Similarity=0.348 Sum_probs=168.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~ 96 (303)
||||||||+|+||++|.++|.++|++|+++.|. ..|+.|.+.+.+.++. +|+|||||+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa 60 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS--------------------DLDLTDPEAVAKLLEAFKPDVVINCAA 60 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------CS-TTSHHHHHHHHHHH--SEEEE---
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------hcCCCCHHHHHHHHHHhCCCeEeccce
Confidence 799999999999999999999999999999775 4678899999998876 899999998
Q ss_pred cC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233 97 RE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEKEVLRE 166 (303)
Q Consensus 97 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~~~~~~ 166 (303)
.. .+..++..+.+|+.++.+|+++|++.+. ++||+||..||+. .|+.+++|.+.||++|.++|+.+++.
T Consensus 61 ~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~ 139 (286)
T PF04321_consen 61 YTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA 139 (286)
T ss_dssp ---HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred eecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 64 3357788999999999999999999998 9999999999855 35566788999999999999999998
Q ss_pred CCCEEEEeecceeeCC-CchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC---CCcEEEEeCC
Q psy4233 167 FPEATIFRPSDMYGSG-DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA---AGKIYQAVGP 242 (303)
Q Consensus 167 ~~~~~ilrp~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~---~g~~~~i~~~ 242 (303)
..++.|+|++++||+. .++...+...+. .++.+.++. ++. +++++++|+|+++..++++... .+.+||++++
T Consensus 140 ~~~~~IlR~~~~~g~~~~~~~~~~~~~~~-~~~~i~~~~--d~~-~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~ 215 (286)
T PF04321_consen 140 CPNALILRTSWVYGPSGRNFLRWLLRRLR-QGEPIKLFD--DQY-RSPTYVDDLARVILELIEKNLSGASPWGIYHLSGP 215 (286)
T ss_dssp -SSEEEEEE-SEESSSSSSHHHHHHHHHH-CTSEEEEES--SCE-E--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---B
T ss_pred cCCEEEEecceecccCCCchhhhHHHHHh-cCCeeEeeC--Cce-eCCEEHHHHHHHHHHHHHhcccccccceeEEEecC
Confidence 8899999999999993 345555554443 556666653 334 7899999999999999986422 2459999999
Q ss_pred cccCHHHHHHHHHHHhcCCCC
Q psy4233 243 KRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 243 ~~~s~~e~~~~i~~~~g~~~~ 263 (303)
+.+|+.|+++.+++.+|.+..
T Consensus 216 ~~~S~~e~~~~i~~~~~~~~~ 236 (286)
T PF04321_consen 216 ERVSRYEFAEAIAKILGLDPE 236 (286)
T ss_dssp S-EEHHHHHHHHHHHHTHCTT
T ss_pred cccCHHHHHHHHHHHhCCCCc
Confidence 999999999999999998874
No 38
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=100.00 E-value=5e-33 Score=242.74 Aligned_cols=227 Identities=15% Similarity=0.121 Sum_probs=169.0
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH---HH-HHHHhc-----ccCEE
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND---DE-IRKAIK-----YSNVV 91 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~-~~~~~~-----~~D~v 91 (303)
|||||||||||++|+++|+++|++++++.|+....... ..+..+|+.|. ++ +..++. ++|+|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~V 72 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF---------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAI 72 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH---------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEE
Confidence 89999999999999999999999877777754321110 12234555553 33 233332 58999
Q ss_pred EEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHH
Q psy4233 92 INLIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEV 163 (303)
Q Consensus 92 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~ 163 (303)
||+|+.... ..+...++.|+.++.+|+++|++.++ ++||+||..+|+.. |..+..|.++|+.+|..+|+++
T Consensus 73 ih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~ 151 (308)
T PRK11150 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYV 151 (308)
T ss_pred EECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHH
Confidence 999985322 23445789999999999999999987 79999999998863 2334567789999999999988
Q ss_pred Hhh----CCCEEEEeecceeeCCCchh----hHHHHHHHh--hhcceeee-cCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233 164 LRE----FPEATIFRPSDMYGSGDKFL----RYYGHMWRH--VFRKLAVY-KKGEETIKQPVYVGDVAAAIVAACKDPDA 232 (303)
Q Consensus 164 ~~~----~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~--~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~ 232 (303)
+.+ +++++++||+++|||+.... .....+.+. .+....++ +++... ++|+|++|+|++++.+++++.
T Consensus 152 ~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~-r~~i~v~D~a~a~~~~~~~~~- 229 (308)
T PRK11150 152 RQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFK-RDFVYVGDVAAVNLWFWENGV- 229 (308)
T ss_pred HHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCcee-eeeeeHHHHHHHHHHHHhcCC-
Confidence 875 78999999999999975321 112222222 23333344 344445 899999999999999987643
Q ss_pred CCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 233 AGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 233 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
+++||+++++.+|+.|+++.+.+.+|.
T Consensus 230 -~~~yni~~~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 230 -SGIFNCGTGRAESFQAVADAVLAYHKK 256 (308)
T ss_pred -CCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence 459999999999999999999999985
No 39
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=100.00 E-value=3.5e-32 Score=237.17 Aligned_cols=222 Identities=16% Similarity=0.126 Sum_probs=174.9
Q ss_pred EEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccccCc
Q psy4233 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIGREF 99 (303)
Q Consensus 22 lVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~~~~ 99 (303)
||||||||||++|+++|+++|++|+++.+. ..+|+.|.+++.++++. +|+|||+|+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~ 61 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------KELDLTRQADVEAFFAKEKPTYVILAAAKVG 61 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeec
Confidence 699999999999999999999988866432 14789999999998875 799999998632
Q ss_pred -----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC------C----CCCCCC-chhHHHHHHHHHH
Q psy4233 100 -----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT------Y----YISGGS-QFYRTKYQGEKEV 163 (303)
Q Consensus 100 -----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~------~----~~~~~~-~y~~~K~~~e~~~ 163 (303)
...+..+++.|+.++.+|+++|++.+++++|++||..+|+.... . |..|.+ .|+.+|..+|+++
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~ 141 (306)
T PLN02725 62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMC 141 (306)
T ss_pred ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence 24566788999999999999999999999999999999985322 1 333433 4999999999877
Q ss_pred Hh----hCCCEEEEeecceeeCCCchh----hHHHHHH----Hh--hhcceee-ecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 164 LR----EFPEATIFRPSDMYGSGDKFL----RYYGHMW----RH--VFRKLAV-YKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 164 ~~----~~~~~~ilrp~~~~G~~~~~~----~~~~~~~----~~--~~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
+. .+++++++||+.+|||+..+. ..+..++ .. .+..+.+ ++++.+. ++|+|++|++++++.+++
T Consensus 142 ~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~Dv~~~~~~~~~ 220 (306)
T PLN02725 142 QAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPL-REFLHVDDLADAVVFLMR 220 (306)
T ss_pred HHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCee-eccccHHHHHHHHHHHHh
Confidence 54 489999999999999975321 1122222 11 2333444 6777777 899999999999999998
Q ss_pred CCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233 229 DPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD 264 (303)
Q Consensus 229 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 264 (303)
+... ++.||+++++.+|+.|+++.+++.+|.+..+
T Consensus 221 ~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~ 255 (306)
T PLN02725 221 RYSG-AEHVNVGSGDEVTIKELAELVKEVVGFEGEL 255 (306)
T ss_pred cccc-CcceEeCCCCcccHHHHHHHHHHHhCCCCce
Confidence 6433 4578999999999999999999999976543
No 40
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=100.00 E-value=7.6e-32 Score=237.20 Aligned_cols=235 Identities=23% Similarity=0.234 Sum_probs=183.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
|+|+||||+||||+++++.|+++|++|++++|+..... .+. ..+++++.+|+.|.+++.++++++|+|||+++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-NLE----GLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc-ccc----cCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 58999999999999999999999999999999754321 111 1358999999999999999999999999999853
Q ss_pred --ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------CCCCCCC---CCchhHHHHHHHHHHHhh
Q psy4233 99 --FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-------PTYYISG---GSQFYRTKYQGEKEVLRE 166 (303)
Q Consensus 99 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-------~~~~~~~---~~~y~~~K~~~e~~~~~~ 166 (303)
....+...++.|+.++.++++++++.+++++|++||..+|+.. |+.+..+ .++|+.+|..+|++++..
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 155 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEM 155 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHH
Confidence 2334567889999999999999999999999999999988741 2223222 457999999999988774
Q ss_pred ----CCCEEEEeecceeeCCCchhhHHHHHHH-hhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233 167 ----FPEATIFRPSDMYGSGDKFLRYYGHMWR-HVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241 (303)
Q Consensus 167 ----~~~~~ilrp~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~ 241 (303)
+++++++||+.+|||+.........++. ...+..+... ... .+|+|++|+|++++.+++++ ..+..|++ +
T Consensus 156 ~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~i~v~D~a~a~~~~~~~~-~~~~~~~~-~ 230 (328)
T TIGR03466 156 AAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV--DTG-LNLVHVDDVAEGHLLALERG-RIGERYIL-G 230 (328)
T ss_pred HHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee--CCC-cceEEHHHHHHHHHHHHhCC-CCCceEEe-c
Confidence 7899999999999997542222222211 1222333332 223 58999999999999999864 35778877 4
Q ss_pred CcccCHHHHHHHHHHHhcCCCC
Q psy4233 242 PKRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 242 ~~~~s~~e~~~~i~~~~g~~~~ 263 (303)
++.+|+.|+++.+++.+|++.+
T Consensus 231 ~~~~s~~e~~~~i~~~~g~~~~ 252 (328)
T TIGR03466 231 GENLTLKQILDKLAEITGRPAP 252 (328)
T ss_pred CCCcCHHHHHHHHHHHhCCCCC
Confidence 6889999999999999998765
No 41
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=100.00 E-value=3e-32 Score=239.06 Aligned_cols=231 Identities=13% Similarity=0.161 Sum_probs=181.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
+++|+||||||+||||++++++|+++| ++|++++|+.... ..+.......+++++.+|++|.+.+.++++++|+|||
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih 80 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ-WEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVH 80 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEE
Confidence 357899999999999999999999986 7899998864432 1111111114689999999999999999999999999
Q ss_pred ccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh----
Q psy4233 94 LIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR---- 165 (303)
Q Consensus 94 ~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~---- 165 (303)
+||... ...+...+++|+.++.++++++++.++++||++||.... .|.++|+.+|..+|++++.
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~--------~p~~~Y~~sK~~~E~l~~~~~~~ 152 (324)
T TIGR03589 81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA--------NPINLYGATKLASDKLFVAANNI 152 (324)
T ss_pred CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC--------CCCCHHHHHHHHHHHHHHHHHhh
Confidence 998632 234557889999999999999999999999999996433 4568899999999998854
Q ss_pred ---hCCCEEEEeecceeeCCCchhhHHHHHHHhhhc-ceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233 166 ---EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFR-KLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVG 241 (303)
Q Consensus 166 ---~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~ 241 (303)
.+++++++||+++|||+......+..... .+. .+++. ++.+. ++|+|++|+|++++.++++. ..+++| +.+
T Consensus 153 ~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~-~~~~~~~i~-~~~~~-r~~i~v~D~a~a~~~al~~~-~~~~~~-~~~ 227 (324)
T TIGR03589 153 SGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKE-EGVTELPIT-DPRMT-RFWITLEQGVNFVLKSLERM-LGGEIF-VPK 227 (324)
T ss_pred ccccCcEEEEEeecceeCCCCCcHHHHHHHHH-hCCCCeeeC-CCCce-EeeEEHHHHHHHHHHHHhhC-CCCCEE-ccC
Confidence 37999999999999997655444444332 232 45554 55666 89999999999999999864 346677 566
Q ss_pred CcccCHHHHHHHHHHHhcC
Q psy4233 242 PKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 242 ~~~~s~~e~~~~i~~~~g~ 260 (303)
+..+++.|+++.+.+....
T Consensus 228 ~~~~sv~el~~~i~~~~~~ 246 (324)
T TIGR03589 228 IPSMKITDLAEAMAPECPH 246 (324)
T ss_pred CCcEEHHHHHHHHHhhCCe
Confidence 6779999999999997654
No 42
>KOG0747|consensus
Probab=100.00 E-value=1.3e-32 Score=223.64 Aligned_cols=244 Identities=16% Similarity=0.178 Sum_probs=207.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecC-CCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRG-NFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVI 92 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi 92 (303)
.++++||||.||||++.++.+...- ++.+.++-- --+....+......++..++++|+.+...+..++.. +|.||
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi 85 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI 85 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence 4799999999999999999999874 555554331 112234444445668899999999999988887765 89999
Q ss_pred EccccC----ccccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCC-------CCCCCCCCCchhHHHHHHH
Q psy4233 93 NLIGRE----FATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNP-------PTYYISGGSQFYRTKYQGE 160 (303)
Q Consensus 93 ~~a~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~-------~~~~~~~~~~y~~~K~~~e 160 (303)
|.|+.. ....+..+...|+.++..|+++++.+| +++|||+||..|||+. |...++|.++|+.+|+++|
T Consensus 86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE 165 (331)
T KOG0747|consen 86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE 165 (331)
T ss_pred hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence 999863 345667788999999999999999985 8999999999999983 4556789999999999999
Q ss_pred HHHHhh----CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCC
Q psy4233 161 KEVLRE----FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAG 234 (303)
Q Consensus 161 ~~~~~~----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g 234 (303)
..++++ +++++++|.++||||++.....++++++. .++..++.|+|.+. ++|+|++|+++++-.+++. ...|
T Consensus 166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~-rs~l~veD~~ea~~~v~~K-g~~g 243 (331)
T KOG0747|consen 166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQT-RSYLYVEDVSEAFKAVLEK-GELG 243 (331)
T ss_pred HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccc-eeeEeHHHHHHHHHHHHhc-CCcc
Confidence 999886 79999999999999999988888877763 78899999999999 8999999999999999986 4569
Q ss_pred cEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233 235 KIYQAVGPKRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 235 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 263 (303)
++|||++..+++..|+++.|++.+++..+
T Consensus 244 eIYNIgtd~e~~~~~l~k~i~eli~~~~~ 272 (331)
T KOG0747|consen 244 EIYNIGTDDEMRVIDLAKDICELFEKRLP 272 (331)
T ss_pred ceeeccCcchhhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999988433
No 43
>PLN00016 RNA-binding protein; Provisional
Probab=100.00 E-value=2.3e-32 Score=244.82 Aligned_cols=230 Identities=17% Similarity=0.172 Sum_probs=177.0
Q ss_pred CCcEEEEE----cCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----h--cCCCCceEEEecCCCCHHHHHHHh-
Q psy4233 17 NGVVATVF----GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----L--CGDLGQVLFQPYHPRNDDEIRKAI- 85 (303)
Q Consensus 17 ~~~~vlVt----GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~~~~Dl~d~~~~~~~~- 85 (303)
++++|||| |||||||++++++|+++||+|++++|+......... . .....+++++.+|+.| +.+++
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~ 127 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA 127 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc
Confidence 46789999 999999999999999999999999998643211000 0 0001358999999877 33443
Q ss_pred -cccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCC---CCCchhHHHHHHHH
Q psy4233 86 -KYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYIS---GGSQFYRTKYQGEK 161 (303)
Q Consensus 86 -~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~---~~~~y~~~K~~~e~ 161 (303)
.++|+|||+++. +..++.+++++|++.|+++|||+||.++|+..+..|.. +..++. +|..+|+
T Consensus 128 ~~~~d~Vi~~~~~------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~ 194 (378)
T PLN00016 128 GAGFDVVYDNNGK------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEA 194 (378)
T ss_pred cCCccEEEeCCCC------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHH
Confidence 469999999763 23467899999999999999999999999864332221 122333 8999999
Q ss_pred HHHhhCCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233 162 EVLREFPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239 (303)
Q Consensus 162 ~~~~~~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i 239 (303)
++++.+++++++||+++|||+... ..++...+. .++.+++++++.+. ++|+|++|+|++++.+++++...+++||+
T Consensus 195 ~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~-~~~~i~~~g~g~~~-~~~i~v~Dva~ai~~~l~~~~~~~~~yni 272 (378)
T PLN00016 195 YLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLV-RGRPVPIPGSGIQL-TQLGHVKDLASMFALVVGNPKAAGQIFNI 272 (378)
T ss_pred HHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHH-cCCceeecCCCCee-eceecHHHHHHHHHHHhcCccccCCEEEe
Confidence 999999999999999999996532 122222222 45567777777777 89999999999999999876566789999
Q ss_pred eCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233 240 VGPKRYLLSELLDWFHVVMKKGEPD 264 (303)
Q Consensus 240 ~~~~~~s~~e~~~~i~~~~g~~~~~ 264 (303)
++++.+|+.|+++.+++.+|.+..+
T Consensus 273 ~~~~~~s~~el~~~i~~~~g~~~~i 297 (378)
T PLN00016 273 VSDRAVTFDGMAKACAKAAGFPEEI 297 (378)
T ss_pred cCCCccCHHHHHHHHHHHhCCCCce
Confidence 9999999999999999999987653
No 44
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=100.00 E-value=1.4e-31 Score=235.42 Aligned_cols=244 Identities=18% Similarity=0.182 Sum_probs=186.1
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEcccc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLIGR 97 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a~~ 97 (303)
|||||||||+||++++++|+++|++|+++.|................+++++.+|+.|.+++.++++ ++|+|||+|+.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 6899999999999999999999999998866433222221111111257889999999999999887 59999999986
Q ss_pred Ccc----ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHh--
Q psy4233 98 EFA----TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLR-- 165 (303)
Q Consensus 98 ~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~-- 165 (303)
... ..+...++.|+.++.++++++++.+++++|++||..+|+.. |+.+..+.+.|+.+|..+|.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~ 160 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS 160 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence 321 24456788999999999999999998999999999888653 444556778999999999998875
Q ss_pred ---hCCCEEEEeecceeeCCCch---------hhHHHHHHHh---hhcceeeec------CCCceeeCceeHHHHHHHHH
Q psy4233 166 ---EFPEATIFRPSDMYGSGDKF---------LRYYGHMWRH---VFRKLAVYK------KGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 166 ---~~~~~~ilrp~~~~G~~~~~---------~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~i~~~Dva~~~~ 224 (303)
.+++++++||+.+|||.... ...+..+... ....+.+++ ++... ++|+|++|+|++++
T Consensus 161 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~v~~~D~a~~~~ 239 (328)
T TIGR01179 161 KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCV-RDYIHVMDLADAHL 239 (328)
T ss_pred HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceE-EeeeeHHHHHHHHH
Confidence 37899999999999985321 1122222211 223333333 34445 79999999999999
Q ss_pred HHhcCC--CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233 225 AACKDP--DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD 264 (303)
Q Consensus 225 ~~~~~~--~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 264 (303)
.++.+. ...+++||+++++++|+.|+++.+++.+|++..+
T Consensus 240 ~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~ 281 (328)
T TIGR01179 240 AALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPV 281 (328)
T ss_pred HHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcce
Confidence 998752 2346799999999999999999999999987653
No 45
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=7.7e-32 Score=224.58 Aligned_cols=218 Identities=22% Similarity=0.254 Sum_probs=184.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~ 96 (303)
|+|||||++|++|++|+++|. .+++|++++|.. +|++|++.+.++++. +|+|||+|+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~~PDvVIn~AA 59 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE--------------------LDITDPDAVLEVIRETRPDVVINAAA 59 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc--------------------ccccChHHHHHHHHhhCCCEEEECcc
Confidence 459999999999999999999 669999999863 679999999999985 899999999
Q ss_pred cC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233 97 RE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPTYYISGGSQFYRTKYQGEKEVLRE 166 (303)
Q Consensus 97 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~~e~~~~~~ 166 (303)
.. .+..++..+.+|..++.+++++|++.|. ++||+||-.||.. .|+++..|.+.||++|+..|..+++.
T Consensus 60 yt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~ 138 (281)
T COG1091 60 YTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA 138 (281)
T ss_pred ccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence 74 3456678999999999999999999998 9999999999765 35566788999999999999999999
Q ss_pred CCCEEEEeecceeeCCC-chhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCccc
Q psy4233 167 FPEATIFRPSDMYGSGD-KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRY 245 (303)
Q Consensus 167 ~~~~~ilrp~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~ 245 (303)
+.+.+|+|.+++||... +|...+.++.. .++.+.+. .++. .++++..|+|+++..+++.....+ +||+.+....
T Consensus 139 ~~~~~I~Rtswv~g~~g~nFv~tml~la~-~~~~l~vv--~Dq~-gsPt~~~dlA~~i~~ll~~~~~~~-~yH~~~~g~~ 213 (281)
T COG1091 139 GPRHLILRTSWVYGEYGNNFVKTMLRLAK-EGKELKVV--DDQY-GSPTYTEDLADAILELLEKEKEGG-VYHLVNSGEC 213 (281)
T ss_pred CCCEEEEEeeeeecCCCCCHHHHHHHHhh-cCCceEEE--CCee-eCCccHHHHHHHHHHHHhccccCc-EEEEeCCCcc
Confidence 99999999999999854 44444444443 44455554 3444 789999999999999998765544 9999999999
Q ss_pred CHHHHHHHHHHHhcCCCC
Q psy4233 246 LLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 246 s~~e~~~~i~~~~g~~~~ 263 (303)
||.|+++.|.+.++.+..
T Consensus 214 Swydfa~~I~~~~~~~~~ 231 (281)
T COG1091 214 SWYEFAKAIFEEAGVDGE 231 (281)
T ss_pred cHHHHHHHHHHHhCCCcc
Confidence 999999999999986553
No 46
>KOG1429|consensus
Probab=100.00 E-value=7.1e-32 Score=219.22 Aligned_cols=268 Identities=17% Similarity=0.111 Sum_probs=210.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
.++++|+||||.||||+||++.|+.+||+|++++-........+..+-..+.++.+.-|+..+ ++.++|-|+|+|
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhLA 99 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHLA 99 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhhc
Confidence 457899999999999999999999999999999987766655555555556677777666444 788899999999
Q ss_pred ccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC-----------CCCCCchhHHHHHHH
Q psy4233 96 GREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY-----------ISGGSQFYRTKYQGE 160 (303)
Q Consensus 96 ~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-----------~~~~~~y~~~K~~~e 160 (303)
+... ..+|-.....|+.++.+++..|++.+ +||++.||..+|+++...| ..+...|...|+.+|
T Consensus 100 apasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE 178 (350)
T KOG1429|consen 100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAE 178 (350)
T ss_pred cCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHH
Confidence 8633 35667788899999999999999988 5999999999999976554 345778999999999
Q ss_pred HHHHhh----CCCEEEEeecceeeCCCc--hhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCC
Q psy4233 161 KEVLRE----FPEATIFRPSDMYGSGDK--FLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDA 232 (303)
Q Consensus 161 ~~~~~~----~~~~~ilrp~~~~G~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~ 232 (303)
.++.++ |+.+.|.|+.+.|||... ....++.++.+ +..++.++|+|.|. ++|.++.|+.++++.+++++..
T Consensus 179 ~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qt-RSF~yvsD~Vegll~Lm~s~~~ 257 (350)
T KOG1429|consen 179 TLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQT-RSFQYVSDLVEGLLRLMESDYR 257 (350)
T ss_pred HHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcce-EEEEeHHHHHHHHHHHhcCCCc
Confidence 998876 799999999999999753 23334444433 78899999999999 8999999999999999997654
Q ss_pred CCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233 233 AGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM 293 (303)
Q Consensus 233 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~ 293 (303)
+ .+|+++++.+|..|+++.+.+..+-...+ +.....+-| .-.-.......+.++|-|-
T Consensus 258 -~-pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp-~kR~pDit~ake~LgW~Pk 316 (350)
T KOG1429|consen 258 -G-PVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDP-RKRKPDITKAKEQLGWEPK 316 (350)
T ss_pred -C-CcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCc-cccCccHHHHHHHhCCCCC
Confidence 3 59999999999999999999999654433 221111222 2333344455666666554
No 47
>PRK07201 short chain dehydrogenase; Provisional
Probab=100.00 E-value=7.9e-32 Score=258.08 Aligned_cols=242 Identities=16% Similarity=0.157 Sum_probs=184.2
Q ss_pred cEEEEEcCCChhHHHHHHHHH--hCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCH------HHHHHHhcccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLG--KQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRND------DEIRKAIKYSN 89 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll--~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~D 89 (303)
|+|||||||||||++++++|+ ++|++|++++|+.... ...+.......+++++.+|+.|+ +.+..+ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 589999999999999999999 5789999999964321 11111000124699999999984 455555 8899
Q ss_pred EEEEccccCc-cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC--------CCCCCCCchhHHHHHHH
Q psy4233 90 VVINLIGREF-ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT--------YYISGGSQFYRTKYQGE 160 (303)
Q Consensus 90 ~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~--------~~~~~~~~y~~~K~~~e 160 (303)
+|||||+... ........++|+.++.+++++|++.+++++||+||..+|+..+. .+..+.++|+.+|+++|
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E 159 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE 159 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence 9999999643 23445678899999999999999999999999999999864321 12233578999999999
Q ss_pred HHHHh-hCCCEEEEeecceeeCCCch-------hhHHHHHHHh---hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 161 KEVLR-EFPEATIFRPSDMYGSGDKF-------LRYYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 161 ~~~~~-~~~~~~ilrp~~~~G~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
+++++ .+++++++||+++|||.... ...+...+.. .....+..+.+... .+++|++|+++++..++..
T Consensus 160 ~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~vddva~ai~~~~~~ 238 (657)
T PRK07201 160 KLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGR-TNIVPVDYVADALDHLMHK 238 (657)
T ss_pred HHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCe-eeeeeHHHHHHHHHHHhcC
Confidence 99985 58999999999999985321 0111112211 11223444555555 7899999999999999886
Q ss_pred CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCC
Q psy4233 230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGE 262 (303)
Q Consensus 230 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 262 (303)
+...|++||+++++++|+.|+++.+++.+|.+.
T Consensus 239 ~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 239 DGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred cCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence 666788999999999999999999999999886
No 48
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=100.00 E-value=1.3e-31 Score=234.36 Aligned_cols=233 Identities=18% Similarity=0.180 Sum_probs=178.9
Q ss_pred EEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----ccCEEEEcc
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----YSNVVINLI 95 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~D~vi~~a 95 (303)
|||||||||||+++++.|+++|+ +|+++.|..... .+... ....+..|+.+.+.++.+.+ ++|+|||+|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A 74 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNL----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG 74 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhh----hheeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence 69999999999999999999997 788887754321 11100 12456788888888877664 699999999
Q ss_pred ccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-----CCC-CCCCCCchhHHHHHHHHHHHhh-
Q psy4233 96 GRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-----PTY-YISGGSQFYRTKYQGEKEVLRE- 166 (303)
Q Consensus 96 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-----~~~-~~~~~~~y~~~K~~~e~~~~~~- 166 (303)
+.. ....+...+++|+.++.+++++|++.++ ++|++||..+|+.. ++. +..|.+.|+.+|..+|++++++
T Consensus 75 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~ 153 (314)
T TIGR02197 75 ACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRV 153 (314)
T ss_pred cccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHh
Confidence 863 2335567889999999999999999887 89999999999752 222 2346789999999999998752
Q ss_pred -----CCCEEEEeecceeeCCCch----hhHHHHHHHh--hhcceeee------cCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 167 -----FPEATIFRPSDMYGSGDKF----LRYYGHMWRH--VFRKLAVY------KKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 167 -----~~~~~ilrp~~~~G~~~~~----~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
+++++++||+.+|||+... ...+..++.. .+..+.++ ++|.+. ++|+|++|++++++.++..
T Consensus 154 ~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~v~D~a~~i~~~~~~ 232 (314)
T TIGR02197 154 LPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQL-RDFVYVKDVVDVNLWLLEN 232 (314)
T ss_pred HhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCce-eeeEEHHHHHHHHHHHHhc
Confidence 4689999999999997532 1223333332 33344443 455666 7999999999999999986
Q ss_pred CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233 230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 230 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 263 (303)
..+++||+++++++|+.|+++.+++.+|.+..
T Consensus 233 --~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~ 264 (314)
T TIGR02197 233 --GVSGIFNLGTGRARSFNDLADAVFKALGKDEK 264 (314)
T ss_pred --ccCceEEcCCCCCccHHHHHHHHHHHhCCCCc
Confidence 34569999999999999999999999997753
No 49
>KOG1430|consensus
Probab=100.00 E-value=2.2e-31 Score=229.39 Aligned_cols=245 Identities=20% Similarity=0.182 Sum_probs=195.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI 92 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi 92 (303)
+++.+++||||+||+|++++++|++++ .+|++++..+... ......-....+++++.+|+.|...+..++.++ .|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 346799999999999999999999998 8999999876522 221111113467999999999999999999999 777
Q ss_pred EccccCc----cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC---------CCCCCCCCCCchhHHHHHH
Q psy4233 93 NLIGREF----ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN---------PPTYYISGGSQFYRTKYQG 159 (303)
Q Consensus 93 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~---------~~~~~~~~~~~y~~~K~~~ 159 (303)
|||+... ...++..+++|+.+|.+++++|++.+++++||+||..|... .++.|....++|+.+|..+
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~a 160 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALA 160 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHH
Confidence 7776422 23578899999999999999999999999999999999543 2333444457999999999
Q ss_pred HHHHHhhC----CCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc-----C
Q psy4233 160 EKEVLREF----PEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK-----D 229 (303)
Q Consensus 160 e~~~~~~~----~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~-----~ 229 (303)
|+++++.+ +..+.+||+.+|||++. ....+..+++ .+......+.+... .++++++.+|.+.+.+.. .
T Consensus 161 E~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~-~g~~~f~~g~~~~~-~~~~~~~Nva~ahilA~~aL~~~~ 238 (361)
T KOG1430|consen 161 EKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALK-NGGFLFKIGDGENL-NDFTYGENVAWAHILAARALLDKS 238 (361)
T ss_pred HHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHH-ccCceEEeeccccc-cceEEechhHHHHHHHHHHHHhcC
Confidence 99999874 78999999999999986 3334444444 66667777777666 899999999888876542 3
Q ss_pred CCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233 230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 230 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 263 (303)
+...|+.|++.+++++...++...+.+.+|...+
T Consensus 239 ~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~ 272 (361)
T KOG1430|consen 239 PSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLP 272 (361)
T ss_pred CccCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence 4568999999999999888888899999999866
No 50
>PLN02996 fatty acyl-CoA reductase
Probab=100.00 E-value=1e-31 Score=246.41 Aligned_cols=246 Identities=15% Similarity=0.115 Sum_probs=188.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCccccc--ch-------hc-------C-C-----CCceEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRD--LR-------LC-------G-D-----LGQVLF 70 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~--~~-------~~-------~-~-----~~~~~~ 70 (303)
.++++|||||||||||+++++.|++.+ .+|+++.|........ +. .. + . .+++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 468899999999999999999999864 4789999976432211 10 00 0 0 157999
Q ss_pred EecCCC-------CHHHHHHHhcccCEEEEccccCc-cccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCCC
Q psy4233 71 QPYHPR-------NDDEIRKAIKYSNVVINLIGREF-ATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPNP 141 (303)
Q Consensus 71 ~~~Dl~-------d~~~~~~~~~~~D~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~ 141 (303)
+.+|++ |.+.+..+++++|+|||+|+... ...+....++|+.++.+++++|++. +++++|++||..+|+..
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~ 168 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK 168 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence 999998 45557778889999999999743 3456678899999999999999986 68899999999998752
Q ss_pred CC----C--C---------------------------------------------------CCCCCchhHHHHHHHHHHH
Q psy4233 142 PT----Y--Y---------------------------------------------------ISGGSQFYRTKYQGEKEVL 164 (303)
Q Consensus 142 ~~----~--~---------------------------------------------------~~~~~~y~~~K~~~e~~~~ 164 (303)
.. . | ....+.|+.+|+.+|+++.
T Consensus 169 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~ 248 (491)
T PLN02996 169 SGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLG 248 (491)
T ss_pred CceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHH
Confidence 10 0 0 1124679999999999998
Q ss_pred hh--CCCEEEEeecceeeCCCchhh-H------HHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC---
Q psy4233 165 RE--FPEATIFRPSDMYGSGDKFLR-Y------YGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--- 230 (303)
Q Consensus 165 ~~--~~~~~ilrp~~~~G~~~~~~~-~------~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--- 230 (303)
++ +++++++||+++|||...+.. + ...++.. .+....++++|.+. +|+++++|++++++.++...
T Consensus 249 ~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~-~D~v~Vddvv~a~l~a~~~~~~~ 327 (491)
T PLN02996 249 NFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSV-LDVIPADMVVNAMIVAMAAHAGG 327 (491)
T ss_pred HhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCee-cceecccHHHHHHHHHHHHhhcc
Confidence 86 799999999999998654311 1 1122221 44455678888888 89999999999999998752
Q ss_pred CCCCcEEEEeCC--cccCHHHHHHHHHHHhcCCC
Q psy4233 231 DAAGKIYQAVGP--KRYLLSELLDWFHVVMKKGE 262 (303)
Q Consensus 231 ~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 262 (303)
...+++||++++ .++|+.|+++.+.+.++..+
T Consensus 328 ~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 328 QGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 124679999998 88999999999999887643
No 51
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.98 E-value=1.8e-30 Score=224.83 Aligned_cols=239 Identities=16% Similarity=0.120 Sum_probs=171.7
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccCcc
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFA 100 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~ 100 (303)
|||||||||||++++++|+++|++|++++|+....... .. .. ..|+.+ ..+...+.++|+|||+|+....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~------~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~ 70 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANT-KW------EG--YKPWAP-LAESEALEGADAVINLAGEPIA 70 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcc-cc------ee--eecccc-cchhhhcCCCCEEEECCCCCcc
Confidence 69999999999999999999999999999986543221 10 11 112222 4455677889999999986432
Q ss_pred ------ccchhhhhhhcchHHHHHHHHHhcCCc--eEEEEecCccCCCC------CCCCCCCCCchhHHHHHHHHHHHh-
Q psy4233 101 ------TKNFTIADANVEIPARLARLSKEMGVE--KFIHISALNADPNP------PTYYISGGSQFYRTKYQGEKEVLR- 165 (303)
Q Consensus 101 ------~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~~Ss~~~~~~~------~~~~~~~~~~y~~~K~~~e~~~~~- 165 (303)
..+..+++.|+.++.++++++++.+++ ++|++||.++|+.. ++.+..+.+.|...+...|+.+..
T Consensus 71 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~ 150 (292)
T TIGR01777 71 DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAA 150 (292)
T ss_pred cccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhc
Confidence 123467789999999999999999863 56667777777753 222233444556666666665443
Q ss_pred --hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233 166 --EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243 (303)
Q Consensus 166 --~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~ 243 (303)
.+++++++||+.+|||+......+...+.. .... .++++.+. ++|||++|+|++++.+++++.. +++||+++++
T Consensus 151 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-~~~~-~~g~~~~~-~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~~~ 226 (292)
T TIGR01777 151 EDLGTRVVLLRTGIVLGPKGGALAKMLPPFRL-GLGG-PLGSGRQW-FSWIHIEDLVQLILFALENASI-SGPVNATAPE 226 (292)
T ss_pred hhcCCceEEEeeeeEECCCcchhHHHHHHHhc-Cccc-ccCCCCcc-cccEeHHHHHHHHHHHhcCccc-CCceEecCCC
Confidence 479999999999999976433332222221 1111 24666666 8999999999999999987554 4599999999
Q ss_pred ccCHHHHHHHHHHHhcCCCCCcccccccCCCCChhhHHH
Q psy4233 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKL 282 (303)
Q Consensus 244 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~p~~~~~~ 282 (303)
.+|+.|+++.+++.+|++.. ++ .|.+....
T Consensus 227 ~~s~~di~~~i~~~~g~~~~--------~~-~p~~~~~~ 256 (292)
T TIGR01777 227 PVRNKEFAKALARALHRPAF--------FP-VPAFVLRA 256 (292)
T ss_pred ccCHHHHHHHHHHHhCCCCc--------Cc-CCHHHHHH
Confidence 99999999999999998765 55 67766543
No 52
>KOG1371|consensus
Probab=99.97 E-value=2.6e-30 Score=215.02 Aligned_cols=246 Identities=19% Similarity=0.125 Sum_probs=194.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----hcCCCCceEEEecCCCCHHHHHHHhcc--cCEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----LCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVV 91 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~v 91 (303)
.++||||||+||||+|.+.+|+++|+.|++++.-.......++ +.....++.++++|+.|.+.++++|+. +|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 4689999999999999999999999999998765444333322 222246799999999999999999987 8999
Q ss_pred EEccccC----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCCCC-CCCchhHHHHHHH
Q psy4233 92 INLIGRE----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYYIS-GGSQFYRTKYQGE 160 (303)
Q Consensus 92 i~~a~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~~~-~~~~y~~~K~~~e 160 (303)
+|.|+.. ..+.|..+++.|+.++.+|++++++++++++||.||+.+|+.+ |..|.. |.++|+.+|...|
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE 161 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE 161 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence 9999863 3467788999999999999999999999999999999999985 444555 8899999999999
Q ss_pred HHHHhh----CCCEEEEeecceee--CCC----ch----hh---HHHHHHHhhhcceeeec------CCCceeeCceeHH
Q psy4233 161 KEVLRE----FPEATIFRPSDMYG--SGD----KF----LR---YYGHMWRHVFRKLAVYK------KGEETIKQPVYVG 217 (303)
Q Consensus 161 ~~~~~~----~~~~~ilrp~~~~G--~~~----~~----~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~ 217 (303)
+++.+. +..++.+|...++| |.. .+ .+ .......-......++| +|... +++||+-
T Consensus 162 ~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~v-rdyi~v~ 240 (343)
T KOG1371|consen 162 EIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIV-RDYIHVL 240 (343)
T ss_pred HHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCee-ecceeeE
Confidence 999886 46788899999999 321 11 11 11111111222222222 34445 8999999
Q ss_pred HHHHHHHHHhcCCC--CCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233 218 DVAAAIVAACKDPD--AAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD 264 (303)
Q Consensus 218 Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 264 (303)
|.|+....++.... ..-.+||+..+...+..++..+++++.|++.++
T Consensus 241 Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~ 289 (343)
T KOG1371|consen 241 DLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKK 289 (343)
T ss_pred ehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCc
Confidence 99999999998643 233499999999999999999999999998876
No 53
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.97 E-value=2.5e-30 Score=210.60 Aligned_cols=243 Identities=16% Similarity=0.172 Sum_probs=183.4
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-ccCEEEEccccC-
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-YSNVVINLIGRE- 98 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~~a~~~- 98 (303)
|+|||||||||++|+..|.+.||+|++++|+++.....+.. .+ ...+.+..... ++|+|||+||.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-----~v-------~~~~~~~~~~~~~~DavINLAG~~I 68 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-----NV-------TLWEGLADALTLGIDAVINLAGEPI 68 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-----cc-------cccchhhhcccCCCCEEEECCCCcc
Confidence 68999999999999999999999999999997654443211 11 12233444444 699999999963
Q ss_pred -----ccccchhhhhhhcchHHHHHHHHHh--cCCceEEEEecCccCCCCCCCCCCCCCchhH-------HHHHHHHHHH
Q psy4233 99 -----FATKNFTIADANVEIPARLARLSKE--MGVEKFIHISALNADPNPPTYYISGGSQFYR-------TKYQGEKEVL 164 (303)
Q Consensus 99 -----~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~-------~K~~~e~~~~ 164 (303)
+.+..+.+.+..+..|..|+++..+ .+++.+|.-|.++.|++.++.+....++++. ..|+.|..-.
T Consensus 69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a 148 (297)
T COG1090 69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQA 148 (297)
T ss_pred ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhh
Confidence 3344567889999999999999985 4466777777778898865544333233222 2222222222
Q ss_pred h-hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233 165 R-EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243 (303)
Q Consensus 165 ~-~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~ 243 (303)
+ .+.+++.+|.|+|.+|..+.+..+....+. ..=--+|+|.|+ ++|||++|++++|.+++++....| .||++++.
T Consensus 149 ~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~--glGG~~GsGrQ~-~SWIhieD~v~~I~fll~~~~lsG-p~N~taP~ 224 (297)
T COG1090 149 QQLGTRVVLLRTGVVLSPDGGALGKMLPLFKL--GLGGKLGSGRQW-FSWIHIEDLVNAILFLLENEQLSG-PFNLTAPN 224 (297)
T ss_pred hhcCceEEEEEEEEEecCCCcchhhhcchhhh--ccCCccCCCCce-eeeeeHHHHHHHHHHHHhCcCCCC-cccccCCC
Confidence 2 378999999999999987766665544432 111336899999 899999999999999999877777 99999999
Q ss_pred ccCHHHHHHHHHHHhcCCCCCcccccccCCCCChhhHHHHhhccC
Q psy4233 244 RYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFINGLF 288 (303)
Q Consensus 244 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~p~~~~~~~l~~~~ 288 (303)
+++..++...+.+++++|.. ++ +|.+.....|+|..
T Consensus 225 PV~~~~F~~al~r~l~RP~~--------~~-vP~~~~rl~LGe~a 260 (297)
T COG1090 225 PVRNKEFAHALGRALHRPAI--------LP-VPSFALRLLLGEMA 260 (297)
T ss_pred cCcHHHHHHHHHHHhCCCcc--------cc-CcHHHHHHHhhhhH
Confidence 99999999999999999988 78 99999888877643
No 54
>PLN02583 cinnamoyl-CoA reductase
Probab=99.97 E-value=6.3e-30 Score=221.79 Aligned_cols=234 Identities=15% Similarity=0.110 Sum_probs=174.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc--ccchh-cCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV--RDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~--~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
.+++|+|||||||||++++++|+++|++|++++|+..... ..+.. .....+++++.+|++|.+++.+++.++|.|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 4678999999999999999999999999999999632211 11111 11124689999999999999999999999999
Q ss_pred ccccCccc--cchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccC--CCC---------CCCCCCC------CCchh
Q psy4233 94 LIGREFAT--KNFTIADANVEIPARLARLSKEM-GVEKFIHISALNAD--PNP---------PTYYISG------GSQFY 153 (303)
Q Consensus 94 ~a~~~~~~--~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~--~~~---------~~~~~~~------~~~y~ 153 (303)
+++..... .....+++|+.++.++++++.+. +++++|++||.+++ +.. |+.+..+ ...|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 87653221 24578999999999999999886 58899999998764 211 1111111 12699
Q ss_pred HHHHHHHHHHHh----hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 154 RTKYQGEKEVLR----EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 154 ~~K~~~e~~~~~----~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
.+|..+|+++++ .+++++++||+++|||+...... .+ ....+.++.+ . .+|||++|+|++++.+++.
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~---~~---~~~~~~~~~~--~-~~~v~V~Dva~a~~~al~~ 235 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP---YL---KGAAQMYENG--V-LVTVDVNFLVDAHIRAFED 235 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh---hh---cCCcccCccc--C-cceEEHHHHHHHHHHHhcC
Confidence 999999999865 38999999999999997643211 11 1122233222 2 5799999999999999997
Q ss_pred CCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 230 PDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 230 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
+...+ .|.++++....+.++++.+.+.+..
T Consensus 236 ~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 236 VSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred cccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence 66655 7888877766778899999998764
No 55
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.97 E-value=1.6e-29 Score=225.59 Aligned_cols=243 Identities=19% Similarity=0.203 Sum_probs=180.1
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccc--ccc----hhc---C-C-C-CceEEEecCCCCH------H
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDV--RDL----RLC---G-D-L-GQVLFQPYHPRND------D 79 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~--~~~----~~~---~-~-~-~~~~~~~~Dl~d~------~ 79 (303)
+|+|||||||||++++++|+++| ++|++++|+..... +.+ ... . . . ++++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 67999999754221 111 000 0 0 0 4799999998753 5
Q ss_pred HHHHHhcccCEEEEccccCcc-ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC------CCCC-----CC
Q psy4233 80 EIRKAIKYSNVVINLIGREFA-TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------PTYY-----IS 147 (303)
Q Consensus 80 ~~~~~~~~~D~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~~-----~~ 147 (303)
.+..+..++|+|||+|+.... .....+.+.|+.++.+++++|.+.++++++++||.++++.. ++.+ ..
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG 160 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence 677777889999999997432 33456778999999999999999999899999999998652 1111 12
Q ss_pred CCCchhHHHHHHHHHHHhh---CCCEEEEeecceeeCCCc----hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233 148 GGSQFYRTKYQGEKEVLRE---FPEATIFRPSDMYGSGDK----FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA 220 (303)
Q Consensus 148 ~~~~y~~~K~~~e~~~~~~---~~~~~ilrp~~~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 220 (303)
+.+.|+.+|+.+|.+++.. +++++++||+.+||+... ....+..++... .....++.......++++++|+|
T Consensus 161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~vddva 239 (367)
T TIGR01746 161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGC-LALGAYPDSPELTEDLTPVDYVA 239 (367)
T ss_pred cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHH-HHhCCCCCCCccccCcccHHHHH
Confidence 3468999999999998875 899999999999997321 122333333321 11112333333236899999999
Q ss_pred HHHHHHhcCCCC--CCcEEEEeCCcccCHHHHHHHHHHHhcCCCCC
Q psy4233 221 AAIVAACKDPDA--AGKIYQAVGPKRYLLSELLDWFHVVMKKGEPD 264 (303)
Q Consensus 221 ~~~~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 264 (303)
++++.++.++.. .+++||+++++++++.|+++.+.+ +|.+...
T Consensus 240 ~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~ 284 (367)
T TIGR01746 240 RAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKL 284 (367)
T ss_pred HHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCc
Confidence 999999876543 277999999999999999999999 8887653
No 56
>PRK05865 hypothetical protein; Provisional
Probab=99.97 E-value=2.1e-29 Score=239.91 Aligned_cols=200 Identities=18% Similarity=0.149 Sum_probs=165.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
|+|+|||||||||++++++|+++|++|++++|+..... ..+++++.+|+.|.+++.++++++|+|||+|+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~--------~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW--------PSSADFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc--------ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 58999999999999999999999999999999743211 1358899999999999999999999999999864
Q ss_pred ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecce
Q psy4233 99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178 (303)
Q Consensus 99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~ 178 (303)
.. ..++|+.++.++++++++.+++++|++||.+ |.++|+++++++++++++||+++
T Consensus 73 ~~-----~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------K~aaE~ll~~~gl~~vILRp~~V 128 (854)
T PRK05865 73 GR-----NDHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------QPRVEQMLADCGLEWVAVRCALI 128 (854)
T ss_pred cc-----hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------HHHHHHHHHHcCCCEEEEEeceE
Confidence 32 5688999999999999999999999999864 88999999989999999999999
Q ss_pred eeCCCchhhHHHHHHHhhhcceeeecCC--CceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHH
Q psy4233 179 YGSGDKFLRYYGHMWRHVFRKLAVYKKG--EETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256 (303)
Q Consensus 179 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~ 256 (303)
|||+.. ..+..+. ..+.++.| .+. ++|+|++|+|++++.++++....+++||+++++.+|+.|+++.+.+
T Consensus 129 YGP~~~--~~i~~ll-----~~~v~~~G~~~~~-~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~ 200 (854)
T PRK05865 129 FGRNVD--NWVQRLF-----ALPVLPAGYADRV-VQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGR 200 (854)
T ss_pred eCCChH--HHHHHHh-----cCceeccCCCCce-EeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhh
Confidence 999632 1222211 23333333 334 7999999999999999875444466999999999999999999987
Q ss_pred Hh
Q psy4233 257 VM 258 (303)
Q Consensus 257 ~~ 258 (303)
..
T Consensus 201 ~~ 202 (854)
T PRK05865 201 PM 202 (854)
T ss_pred hh
Confidence 54
No 57
>PLN02778 3,5-epimerase/4-reductase
Probab=99.97 E-value=9.5e-29 Score=214.13 Aligned_cols=210 Identities=15% Similarity=0.119 Sum_probs=158.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL 94 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~ 94 (303)
..|+||||||+||||++|+++|+++|++|+... .|+.|.+.+...+. ++|+|||+
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------~~~~~~~~v~~~l~~~~~D~ViH~ 64 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------GRLENRASLEADIDAVKPTHVFNA 64 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-----------------------CccCCHHHHHHHHHhcCCCEEEEC
Confidence 357999999999999999999999999987532 12345566666665 58999999
Q ss_pred cccCc-------cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------------CCCC-CCCCCCchhH
Q psy4233 95 IGREF-------ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------------PPTY-YISGGSQFYR 154 (303)
Q Consensus 95 a~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------~~~~-~~~~~~~y~~ 154 (303)
|+... ...+...+++|+.++.+|+++|++.+++ ++++||.++|+. .|+. |..+.++|+.
T Consensus 65 Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~ 143 (298)
T PLN02778 65 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSK 143 (298)
T ss_pred CcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHH
Confidence 99642 2356788999999999999999999985 566676666542 1222 3234589999
Q ss_pred HHHHHHHHHHhhCCCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233 155 TKYQGEKEVLREFPEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA 233 (303)
Q Consensus 155 ~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~ 233 (303)
+|+++|.+++.+. +..++|+++.+|++... ...+..++ ....+...+ .++++++|++++++.+++++.
T Consensus 144 sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~--~~~~~~~~~------~s~~yv~D~v~al~~~l~~~~-- 212 (298)
T PLN02778 144 TKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKIT--RYEKVVNIP------NSMTILDELLPISIEMAKRNL-- 212 (298)
T ss_pred HHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHH--cCCCeeEcC------CCCEEHHHHHHHHHHHHhCCC--
Confidence 9999999998864 57789998888875332 22332222 222333221 368999999999999997543
Q ss_pred CcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233 234 GKIYQAVGPKRYLLSELLDWFHVVMKKG 261 (303)
Q Consensus 234 g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 261 (303)
+++||+++++.+|+.|+++.+++.+|..
T Consensus 213 ~g~yNigs~~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 213 TGIYNFTNPGVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 3499999999999999999999999964
No 58
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.97 E-value=7.8e-29 Score=213.95 Aligned_cols=211 Identities=13% Similarity=0.081 Sum_probs=163.9
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh------cc-cCEEE
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI------KY-SNVVI 92 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~-~D~vi 92 (303)
+|+||||||++|++++++|+++|++|++++|++.+.. ..+++.+.+|+.|++++..++ ++ +|+|+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------CCCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence 5899999999999999999999999999999865321 135788899999999999998 57 99999
Q ss_pred EccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-CCCEE
Q psy4233 93 NLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-FPEAT 171 (303)
Q Consensus 93 ~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-~~~~~ 171 (303)
|+++.... ......+++++|+++|++|||++||..++.. ...+...|+++++. +++++
T Consensus 73 ~~~~~~~~---------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~------------~~~~~~~~~~l~~~~gi~~t 131 (285)
T TIGR03649 73 LVAPPIPD---------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG------------GPAMGQVHAHLDSLGGVEYT 131 (285)
T ss_pred EeCCCCCC---------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC------------CchHHHHHHHHHhccCCCEE
Confidence 99874321 1234568999999999999999998766431 11344567888886 99999
Q ss_pred EEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHH
Q psy4233 172 IFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELL 251 (303)
Q Consensus 172 ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~ 251 (303)
++||+++|++.... .....+ ......+.+.+... ++||+++|+|++++.++.++...++.|++.+++.+|+.|++
T Consensus 132 ilRp~~f~~~~~~~--~~~~~~--~~~~~~~~~~g~~~-~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia 206 (285)
T TIGR03649 132 VLRPTWFMENFSEE--FHVEAI--RKENKIYSATGDGK-IPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVA 206 (285)
T ss_pred EEeccHHhhhhccc--cccccc--ccCCeEEecCCCCc-cCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHH
Confidence 99999998653111 011111 11122234455555 79999999999999999876666779999999999999999
Q ss_pred HHHHHHhcCCCCC
Q psy4233 252 DWFHVVMKKGEPD 264 (303)
Q Consensus 252 ~~i~~~~g~~~~~ 264 (303)
+.+.+.+|++...
T Consensus 207 ~~l~~~~g~~v~~ 219 (285)
T TIGR03649 207 EILSRVLGRKITH 219 (285)
T ss_pred HHHHHHhCCceEE
Confidence 9999999998764
No 59
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.96 E-value=4.6e-29 Score=209.19 Aligned_cols=229 Identities=18% Similarity=0.144 Sum_probs=174.3
Q ss_pred EEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhc---CCCCce----EEEecCCCCHHHHHHHhc--ccCE
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLC---GDLGQV----LFQPYHPRNDDEIRKAIK--YSNV 90 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~---~~~~~~----~~~~~Dl~d~~~~~~~~~--~~D~ 90 (303)
||||||+|.||+.|+++|++.+ .++++++|++.+........ ...+++ ..+.+|++|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999987 68999999865433222221 111233 456899999999999999 7999
Q ss_pred EEEcccc----CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh
Q psy4233 91 VINLIGR----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE 166 (303)
Q Consensus 91 vi~~a~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~ 166 (303)
|||+|+. ..+.+|.+..++|+.++.|++++|.+++++++|++||..+. +|.+.||.+|+.+|.++...
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv--------~PtnvmGatKrlaE~l~~~~ 152 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV--------NPTNVMGATKRLAEKLVQAA 152 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS--------S--SHHHHHHHHHHHHHHHH
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC--------CCCcHHHHHHHHHHHHHHHH
Confidence 9999996 45678899999999999999999999999999999999886 57799999999999999886
Q ss_pred C-------CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233 167 F-------PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239 (303)
Q Consensus 167 ~-------~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i 239 (303)
+ ..++++|+|+|.|...+....+...++ .++++.+-. .+..+-|+++++.++.++.++... ..|++|.+
T Consensus 153 ~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~-~g~PlTvT~--p~mtRffmti~EAv~Lvl~a~~~~-~~geifvl 228 (293)
T PF02719_consen 153 NQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIK-NGGPLTVTD--PDMTRFFMTIEEAVQLVLQAAALA-KGGEIFVL 228 (293)
T ss_dssp CCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHH-TTSSEEECE--TT-EEEEE-HHHHHHHHHHHHHH---TTEEEEE
T ss_pred hhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHH-cCCcceeCC--CCcEEEEecHHHHHHHHHHHHhhC-CCCcEEEe
Confidence 3 589999999999988877777777666 556666543 333367999999999999998754 34889999
Q ss_pred eCCcccCHHHHHHHHHHHhcCC
Q psy4233 240 VGPKRYLLSELLDWFHVVMKKG 261 (303)
Q Consensus 240 ~~~~~~s~~e~~~~i~~~~g~~ 261 (303)
.-|+++++.|+++.+.+..|..
T Consensus 229 ~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 229 DMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp ---TCEECCCHHHHHHHHTT-E
T ss_pred cCCCCcCHHHHHHHHHhhcccc
Confidence 9999999999999999999854
No 60
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.96 E-value=8.9e-28 Score=213.68 Aligned_cols=233 Identities=17% Similarity=0.129 Sum_probs=198.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcC---CCCceEEEecCCCCHHHHHHHhcc--cC
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCG---DLGQVLFQPYHPRNDDEIRKAIKY--SN 89 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~--~D 89 (303)
.++++||||||+|-||+++++++++.+ .+++.++|++.+-........ ...++.++.+|+.|.+.+..++++ +|
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd 327 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD 327 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence 468899999999999999999999987 679999998654322211111 136789999999999999999999 99
Q ss_pred EEEEcccc----CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh
Q psy4233 90 VVINLIGR----EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR 165 (303)
Q Consensus 90 ~vi~~a~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~ 165 (303)
+|||+|+. ..+.+|.+..+.|+.||+|++++|.+.+++++|++||..+- +|.|.||.+|+.+|.++.+
T Consensus 328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV--------~PtNvmGaTKr~aE~~~~a 399 (588)
T COG1086 328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV--------NPTNVMGATKRLAEKLFQA 399 (588)
T ss_pred eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc--------CCchHhhHHHHHHHHHHHH
Confidence 99999995 56789999999999999999999999999999999998776 5789999999999999887
Q ss_pred h-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEE
Q psy4233 166 E-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238 (303)
Q Consensus 166 ~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~ 238 (303)
. +..++.+|.|+|.|...+-...+...++ +++++++- ..+.-+-|.++.|.++.++.+... ...|++|.
T Consensus 400 ~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~-~GgplTvT--dp~mtRyfMTI~EAv~LVlqA~a~-~~gGeifv 475 (588)
T COG1086 400 ANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIA-EGGPLTVT--DPDMTRFFMTIPEAVQLVLQAGAI-AKGGEIFV 475 (588)
T ss_pred HhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHH-cCCCcccc--CCCceeEEEEHHHHHHHHHHHHhh-cCCCcEEE
Confidence 5 2689999999999999888888888777 56666654 233336799999999999999885 34588999
Q ss_pred EeCCcccCHHHHHHHHHHHhcC
Q psy4233 239 AVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 239 i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
+..|+++++.|+++.+.+..|.
T Consensus 476 ldMGepvkI~dLAk~mi~l~g~ 497 (588)
T COG1086 476 LDMGEPVKIIDLAKAMIELAGQ 497 (588)
T ss_pred EcCCCCeEHHHHHHHHHHHhCC
Confidence 9999999999999999999984
No 61
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.96 E-value=2.6e-27 Score=200.69 Aligned_cols=224 Identities=17% Similarity=0.143 Sum_probs=166.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHh-cccCEEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAI-KYSNVVIN 93 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~-~~~D~vi~ 93 (303)
..+|+|+||||||+||++++++|+++|++|++++|+......... ...+++++.+|+.| .+.+.+.+ .++|+|||
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDAVIC 91 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCEEEE
Confidence 457899999999999999999999999999999997543222111 12468999999998 46777777 68999999
Q ss_pred ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCC-------CCchhHHHHHHHHHHHhh
Q psy4233 94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISG-------GSQFYRTKYQGEKEVLRE 166 (303)
Q Consensus 94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~-------~~~y~~~K~~~e~~~~~~ 166 (303)
+++......+....++|..++.++++++++.+++++|++||.++|+.....+..+ ...|...|..+|+++++.
T Consensus 92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~ 171 (251)
T PLN00141 92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS 171 (251)
T ss_pred CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence 9886432233334577888999999999999999999999999987543322221 122345788999999999
Q ss_pred CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCC---c
Q psy4233 167 FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGP---K 243 (303)
Q Consensus 167 ~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~---~ 243 (303)
+++++++||++++++... + .+... .+......+|+.+|+|++++.++..+...+.++.+.+. .
T Consensus 172 gi~~~iirpg~~~~~~~~------------~-~~~~~-~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (251)
T PLN00141 172 GINYTIVRPGGLTNDPPT------------G-NIVME-PEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP 237 (251)
T ss_pred CCcEEEEECCCccCCCCC------------c-eEEEC-CCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence 999999999999976321 0 11111 11111135799999999999999877766778888873 2
Q ss_pred ccCHHHHHHHHHH
Q psy4233 244 RYLLSELLDWFHV 256 (303)
Q Consensus 244 ~~s~~e~~~~i~~ 256 (303)
..++.+++..+++
T Consensus 238 ~~~~~~~~~~~~~ 250 (251)
T PLN00141 238 KRSYKDLFASIKQ 250 (251)
T ss_pred chhHHHHHHHhhc
Confidence 3788888888765
No 62
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.95 E-value=7.7e-27 Score=188.40 Aligned_cols=179 Identities=23% Similarity=0.322 Sum_probs=145.8
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccCcc
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREFA 100 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~ 100 (303)
|+|+||||++|+.++++|+++|++|++++|++.+..+ .++++++.+|+.|++++.++++++|+||++++....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence 7999999999999999999999999999998654333 367999999999999999999999999999986543
Q ss_pred ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC----CCCCCchhHHHHHHHHHHHhhCCCEEEEeec
Q psy4233 101 TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY----ISGGSQFYRTKYQGEKEVLREFPEATIFRPS 176 (303)
Q Consensus 101 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~----~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~ 176 (303)
+...++++++++++.+++++|++|+.+++....... ......|...|..+|+.++..+++|+++||+
T Consensus 74 ---------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~ 144 (183)
T PF13460_consen 74 ---------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPG 144 (183)
T ss_dssp ---------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEES
T ss_pred ---------cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECc
Confidence 166788999999999999999999999998643310 0112468899999999999999999999999
Q ss_pred ceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 177 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
.+||+....... ....+... .++|+.+|+|++++.++++
T Consensus 145 ~~~~~~~~~~~~-------------~~~~~~~~-~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 145 WIYGNPSRSYRL-------------IKEGGPQG-VNFISREDVAKAIVEALEN 183 (183)
T ss_dssp EEEBTTSSSEEE-------------ESSTSTTS-HCEEEHHHHHHHHHHHHH-
T ss_pred EeEeCCCcceeE-------------EeccCCCC-cCcCCHHHHHHHHHHHhCC
Confidence 999986431111 11123333 6899999999999999864
No 63
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.95 E-value=9e-27 Score=215.54 Aligned_cols=243 Identities=17% Similarity=0.191 Sum_probs=179.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCccc--ccch-h-------------cC------CCCceEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDV--RDLR-L-------------CG------DLGQVLF 70 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~--~~~~-~-------------~~------~~~~~~~ 70 (303)
..+++|||||||||||++|++.|++.+ .+|++++|...... +.+. . .+ ...++++
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 468899999999999999999999865 37899999654321 1110 0 01 1357999
Q ss_pred EecCCCCH------HHHHHHhcccCEEEEccccCc-cccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCC
Q psy4233 71 QPYHPRND------DEIRKAIKYSNVVINLIGREF-ATKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPP 142 (303)
Q Consensus 71 ~~~Dl~d~------~~~~~~~~~~D~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~ 142 (303)
+.+|+.++ +....+.+++|+|||+|+... ...+....++|+.++.+++++|++.+ ++++||+||..+|+...
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~ 276 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ 276 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC
Confidence 99999986 455666677999999999754 34566789999999999999998864 78999999999987632
Q ss_pred ------CCC----------------------------------------------------------CCCCCchhHHHHH
Q psy4233 143 ------TYY----------------------------------------------------------ISGGSQFYRTKYQ 158 (303)
Q Consensus 143 ------~~~----------------------------------------------------------~~~~~~y~~~K~~ 158 (303)
..| ..-.+.|..+|..
T Consensus 277 G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~l 356 (605)
T PLN02503 277 GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAM 356 (605)
T ss_pred CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHH
Confidence 111 0002789999999
Q ss_pred HHHHHHhh--CCCEEEEeecce----------eeCCCchhhHHHHHHHhhhccee-eecCCCceeeCceeHHHHHHHHHH
Q psy4233 159 GEKEVLRE--FPEATIFRPSDM----------YGSGDKFLRYYGHMWRHVFRKLA-VYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 159 ~e~~~~~~--~~~~~ilrp~~~----------~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+|+++.+. ++|++|+||+.| ++++........... ..+.++ +++++... .|.|++|.++++++.
T Consensus 357 AE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~--g~G~lr~~~~~~~~~-~DiVPVD~vvna~i~ 433 (605)
T PLN02503 357 GEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYY--GKGQLTGFLADPNGV-LDVVPADMVVNATLA 433 (605)
T ss_pred HHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhhe--eccceeEEEeCCCee-EeEEeecHHHHHHHH
Confidence 99999986 699999999999 444432222222111 223333 55555555 899999999999999
Q ss_pred HhcC----CCCCCcEEEEeCC--cccCHHHHHHHHHHHhcCC
Q psy4233 226 ACKD----PDAAGKIYQAVGP--KRYLLSELLDWFHVVMKKG 261 (303)
Q Consensus 226 ~~~~----~~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 261 (303)
++.. ....+++||++++ .++++.++.+.+.+.+.+.
T Consensus 434 a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~ 475 (605)
T PLN02503 434 AMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSS 475 (605)
T ss_pred HHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhC
Confidence 8431 1224789999988 8899999999999877653
No 64
>PRK12320 hypothetical protein; Provisional
Probab=99.95 E-value=4.2e-26 Score=213.38 Aligned_cols=200 Identities=15% Similarity=0.155 Sum_probs=155.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
||||||||+||||++++++|+++|++|++++|.+.... .++++++.+|+.|+. +.+++.++|+|||+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~--------~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL--------DPRVDYVCASLRNPV-LQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc--------cCCceEEEccCCCHH-HHHHhcCCCEEEEcCccC
Confidence 58999999999999999999999999999998643211 135899999999985 778888999999999864
Q ss_pred ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecce
Q psy4233 99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDM 178 (303)
Q Consensus 99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~ 178 (303)
... ...+|+.++.|++++|++.++ ++||+||.. +.+ ..|. .+|.++..++++++++|++++
T Consensus 72 ~~~----~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~--G~~--------~~~~----~aE~ll~~~~~p~~ILR~~nV 132 (699)
T PRK12320 72 TSA----PGGVGITGLAHVANAAARAGA-RLLFVSQAA--GRP--------ELYR----QAETLVSTGWAPSLVIRIAPP 132 (699)
T ss_pred ccc----hhhHHHHHHHHHHHHHHHcCC-eEEEEECCC--CCC--------cccc----HHHHHHHhcCCCEEEEeCcee
Confidence 221 235799999999999999998 799999863 321 1232 478888888899999999999
Q ss_pred eeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHH
Q psy4233 179 YGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256 (303)
Q Consensus 179 ~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~ 256 (303)
|||+... ...+..++..... .+. ..++|++|++++++.+++.+. .| +||+++++.+|+.|+++.+..
T Consensus 133 YGp~~~~~~~r~I~~~l~~~~~--------~~p-I~vIyVdDvv~alv~al~~~~-~G-iyNIG~~~~~Si~el~~~i~~ 201 (699)
T PRK12320 133 VGRQLDWMVCRTVATLLRSKVS--------ARP-IRVLHLDDLVRFLVLALNTDR-NG-VVDLATPDTTNVVTAWRLLRS 201 (699)
T ss_pred cCCCCcccHhHHHHHHHHHHHc--------CCc-eEEEEHHHHHHHHHHHHhCCC-CC-EEEEeCCCeeEHHHHHHHHHH
Confidence 9996542 2334444332111 122 346899999999999997533 34 999999999999999998876
Q ss_pred H
Q psy4233 257 V 257 (303)
Q Consensus 257 ~ 257 (303)
.
T Consensus 202 ~ 202 (699)
T PRK12320 202 V 202 (699)
T ss_pred h
Confidence 6
No 65
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.94 E-value=1.3e-25 Score=204.28 Aligned_cols=231 Identities=18% Similarity=0.136 Sum_probs=168.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--------cC--CCCceEEEecCCCCHHHHHHHh
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--------CG--DLGQVLFQPYHPRNDDEIRKAI 85 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--------~~--~~~~~~~~~~Dl~d~~~~~~~~ 85 (303)
.++++|+||||+|+||++++++|+++|++|++++|+.......... .+ ...+++++.+|+.|.+++.+.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 3567899999999999999999999999999999975443221110 01 0135889999999999999999
Q ss_pred cccCEEEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-CCCCCCCCCchhHHHHHHHHH
Q psy4233 86 KYSNVVINLIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-PTYYISGGSQFYRTKYQGEKE 162 (303)
Q Consensus 86 ~~~D~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-~~~~~~~~~~y~~~K~~~e~~ 162 (303)
.++|+|||++|.... ......+++|+.++.++++++++.+++|||++||.++.... ..........|..+|..+|++
T Consensus 158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~ 237 (576)
T PLN03209 158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEA 237 (576)
T ss_pred cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHH
Confidence 999999999986422 12345678899999999999999999999999999874211 111122345677899999999
Q ss_pred HHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC-CCCcEEEEeC
Q psy4233 163 VLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-AAGKIYQAVG 241 (303)
Q Consensus 163 ~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~ 241 (303)
+...|++|++||||+++++.+.... . ..+.....+... ...+..+|||+++++++.++. ..+++|.+.+
T Consensus 238 L~~sGIrvTIVRPG~L~tp~d~~~~--------t-~~v~~~~~d~~~-gr~isreDVA~vVvfLasd~~as~~kvvevi~ 307 (576)
T PLN03209 238 LIASGLPYTIVRPGGMERPTDAYKE--------T-HNLTLSEEDTLF-GGQVSNLQVAELMACMAKNRRLSYCKVVEVIA 307 (576)
T ss_pred HHHcCCCEEEEECCeecCCcccccc--------c-cceeeccccccC-CCccCHHHHHHHHHHHHcCchhccceEEEEEe
Confidence 9999999999999999987544210 0 111111111111 235899999999999998654 5788999998
Q ss_pred CcccCHHHHHHHHHH
Q psy4233 242 PKRYLLSELLDWFHV 256 (303)
Q Consensus 242 ~~~~s~~e~~~~i~~ 256 (303)
+.......+.+.+..
T Consensus 308 ~~~~p~~~~~~~~~~ 322 (576)
T PLN03209 308 ETTAPLTPMEELLAK 322 (576)
T ss_pred CCCCCCCCHHHHHHh
Confidence 865444555555543
No 66
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.94 E-value=5.3e-26 Score=192.23 Aligned_cols=200 Identities=19% Similarity=0.199 Sum_probs=123.6
Q ss_pred EEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcc--cccc----h---hc--C---CCCceEEEecCCCCH------HH
Q psy4233 23 VFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYD--VRDL----R---LC--G---DLGQVLFQPYHPRND------DE 80 (303)
Q Consensus 23 VtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~--~~~~----~---~~--~---~~~~~~~~~~Dl~d~------~~ 80 (303)
|||||||+|.+|+++|++++. +|+|++|..... .+.+ . .+ . ...+++++.||++++ ++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 999999976432 1111 1 00 0 157899999999874 56
Q ss_pred HHHHhcccCEEEEccccCccc-cchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC---------------
Q psy4233 81 IRKAIKYSNVVINLIGREFAT-KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY--------------- 144 (303)
Q Consensus 81 ~~~~~~~~D~vi~~a~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~--------------- 144 (303)
+..+.+++|+|||||+..... ......+.|+.+++++++.|.+.+.++|+|+||..+.+.....
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 777778899999999975443 4456889999999999999998777799999995554432211
Q ss_pred CCCCCCchhHHHHHHHHHHHhh----CCCEEEEeecceeeC-CCc---hhhHHHHHHHh--hhccee-eecCCCceeeCc
Q psy4233 145 YISGGSQFYRTKYQGEKEVLRE----FPEATIFRPSDMYGS-GDK---FLRYYGHMWRH--VFRKLA-VYKKGEETIKQP 213 (303)
Q Consensus 145 ~~~~~~~y~~~K~~~e~~~~~~----~~~~~ilrp~~~~G~-~~~---~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~ 213 (303)
.....++|.++|+.+|+++++. +++++|+|||.++|. ..+ ....+..++.. ..+.+| ..+..... .++
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~d~ 239 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDAR-LDL 239 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT---E
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCce-EeE
Confidence 1233578999999999999875 899999999999993 221 11112222221 334444 33333334 899
Q ss_pred eeHHHHHHHH
Q psy4233 214 VYVGDVAAAI 223 (303)
Q Consensus 214 i~~~Dva~~~ 223 (303)
+++|.+|++|
T Consensus 240 vPVD~va~aI 249 (249)
T PF07993_consen 240 VPVDYVARAI 249 (249)
T ss_dssp EEHHHHHHHH
T ss_pred ECHHHHHhhC
Confidence 9999999986
No 67
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.94 E-value=3.1e-26 Score=191.93 Aligned_cols=224 Identities=18% Similarity=0.153 Sum_probs=164.9
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccCc
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGREF 99 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~ 99 (303)
|+|+||||.+|+++++.|++.+++|++++|+..+.. +.++. .+++++.+|+.|.+++.++|+++|+||++.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~----~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~ 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA----LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH----TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc----ccceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence 799999999999999999999999999999874322 22222 3588999999999999999999999999988643
Q ss_pred cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeeccee
Q psy4233 100 ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMY 179 (303)
Q Consensus 100 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~~ 179 (303)
. .......+++++|+++|+++||+.|....+..... ..|..++...|...|+++++.+++|+++|||.++
T Consensus 77 ~--------~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~--~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~ 146 (233)
T PF05368_consen 77 P--------SELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSG--SEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFM 146 (233)
T ss_dssp C--------CHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTT--STTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEH
T ss_pred h--------hhhhhhhhHHHhhhccccceEEEEEeccccccccc--ccccchhhhhhhhhhhhhhhccccceeccccchh
Confidence 1 12445668999999999999997666555532111 1223456678999999999999999999999887
Q ss_pred eCCCchhhHHHHHHHhh--hcceeeecCCCceeeCc-eeHHHHHHHHHHHhcCCCCC--CcEEEEeCCcccCHHHHHHHH
Q psy4233 180 GSGDKFLRYYGHMWRHV--FRKLAVYKKGEETIKQP-VYVGDVAAAIVAACKDPDAA--GKIYQAVGPKRYLLSELLDWF 254 (303)
Q Consensus 180 G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-i~~~Dva~~~~~~~~~~~~~--g~~~~i~~~~~~s~~e~~~~i 254 (303)
... ...+....... ...+.+++++... ..+ ++.+|+|++++.++.++... ++.+.+++ +.+|+.|+++.+
T Consensus 147 e~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia~~~ 221 (233)
T PF05368_consen 147 ENL---LPPFAPVVDIKKSKDVVTLPGPGNQK-AVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIAAIL 221 (233)
T ss_dssp HHH---HTTTHHTTCSCCTSSEEEEETTSTSE-EEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHHHHH
T ss_pred hhh---hhhhcccccccccceEEEEccCCCcc-ccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHHHHH
Confidence 431 12111111111 1246677777654 445 59999999999999886543 55666654 889999999999
Q ss_pred HHHhcCCCC
Q psy4233 255 HVVMKKGEP 263 (303)
Q Consensus 255 ~~~~g~~~~ 263 (303)
++.+|+++.
T Consensus 222 s~~~G~~v~ 230 (233)
T PF05368_consen 222 SKVLGKKVK 230 (233)
T ss_dssp HHHHTSEEE
T ss_pred HHHHCCccE
Confidence 999999854
No 68
>KOG1431|consensus
Probab=99.94 E-value=5.8e-25 Score=173.36 Aligned_cols=254 Identities=15% Similarity=0.144 Sum_probs=188.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVIN 93 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~ 93 (303)
++||||||++|.+|++|.+.+.+.|. +-.++.-+ -.+||++.++.+++|+. +..|||
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------kd~DLt~~a~t~~lF~~ekPthVIh 61 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------KDADLTNLADTRALFESEKPTHVIH 61 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------ccccccchHHHHHHHhccCCceeee
Confidence 57999999999999999999999875 22222221 25789999999999976 899999
Q ss_pred ccccC-----ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC----------CCC-CCchhHHHH
Q psy4233 94 LIGRE-----FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY----------ISG-GSQFYRTKY 157 (303)
Q Consensus 94 ~a~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~----------~~~-~~~y~~~K~ 157 (303)
+|+.. ....+.++...|+....|+++.|.+.|++|+|++.|.+.|.+..+.| +.| ...|+.+|+
T Consensus 62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr 141 (315)
T KOG1431|consen 62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR 141 (315)
T ss_pred hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence 99752 33566789999999999999999999999999999999998743332 223 346888997
Q ss_pred HHHH----HHHhhCCCEEEEeecceeeCCCchh----hHHHHHHHh-------hhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 158 QGEK----EVLREFPEATIFRPSDMYGSGDKFL----RYYGHMWRH-------VFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 158 ~~e~----~~~~~~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
.+.- |..++|..++.+-|.++|||.+++. ..++.+++. ....+.++|+|... ++|+|++|+|++
T Consensus 142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~Pl-RqFiys~DLA~l 220 (315)
T KOG1431|consen 142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPL-RQFIYSDDLADL 220 (315)
T ss_pred HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChH-HHHhhHhHHHHH
Confidence 6654 4444589999999999999976531 222222222 22378899999998 899999999999
Q ss_pred HHHHhcCCCCCCcEEEEeCCc--ccCHHHHHHHHHHHhcCCCCC-cccccccCCCCChhhHHHHhhccCCCCCC
Q psy4233 223 IVAACKDPDAAGKIYQAVGPK--RYLLSELLDWFHVVMKKGEPD-YGYYRYDLRYDPVMPLKLFINGLFPGYPM 293 (303)
Q Consensus 223 ~~~~~~~~~~~g~~~~i~~~~--~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~p~~~~~~~l~~~~~~~~~ 293 (303)
+++++.+-.. -+..+++.++ .+|++|+++++.++++-...+ |+-...+-. ...-...+.|..++|.+.+
T Consensus 221 ~i~vlr~Y~~-vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq-~kKtasnsKL~sl~pd~~f 292 (315)
T KOG1431|consen 221 FIWVLREYEG-VEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQ-FKKTASNSKLRSLLPDFKF 292 (315)
T ss_pred HHHHHHhhcC-ccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCC-cccccchHHHHHhCCCccc
Confidence 9999986433 3467777777 799999999999999987775 443333332 2222333456666665444
No 69
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.93 E-value=1.8e-24 Score=207.16 Aligned_cols=208 Identities=15% Similarity=0.134 Sum_probs=157.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL 94 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~ 94 (303)
..||||||||+||||++|++.|.++|++|... .+|++|.+.+...+. ++|+||||
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-----------------------~~~l~d~~~v~~~i~~~~pd~Vih~ 435 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-----------------------KGRLEDRSSLLADIRNVKPTHVFNA 435 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEee-----------------------ccccccHHHHHHHHHhhCCCEEEEC
Confidence 35799999999999999999999999887311 134678888888776 59999999
Q ss_pred cccCc-------cccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------------CCCCCCCC-CCchhH
Q psy4233 95 IGREF-------ATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------------PPTYYISG-GSQFYR 154 (303)
Q Consensus 95 a~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------~~~~~~~~-~~~y~~ 154 (303)
|+... ...+...+++|+.++.+|+++|++.++ ++|++||..+|+. .|+.++.+ .++|+.
T Consensus 436 Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~ 514 (668)
T PLN02260 436 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSK 514 (668)
T ss_pred CcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhH
Confidence 98642 235678899999999999999999998 5777888777642 12333333 489999
Q ss_pred HHHHHHHHHHhhCCCEEEEeecceeeCC-CchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233 155 TKYQGEKEVLREFPEATIFRPSDMYGSG-DKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA 233 (303)
Q Consensus 155 ~K~~~e~~~~~~~~~~~ilrp~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~ 233 (303)
+|+++|++++.+ .++.++|+.++||.+ ....+++..+++ ....+.+. .+..+++|++.+++.++..+ .
T Consensus 515 sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~-~~~~~~vp-------~~~~~~~~~~~~~~~l~~~~-~- 583 (668)
T PLN02260 515 TKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISR-YNKVVNIP-------NSMTVLDELLPISIEMAKRN-L- 583 (668)
T ss_pred HHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhc-cceeeccC-------CCceehhhHHHHHHHHHHhC-C-
Confidence 999999999887 477889999999743 122233444443 22222221 34677889999988888742 2
Q ss_pred CcEEEEeCCcccCHHHHHHHHHHHhc
Q psy4233 234 GKIYQAVGPKRYLLSELLDWFHVVMK 259 (303)
Q Consensus 234 g~~~~i~~~~~~s~~e~~~~i~~~~g 259 (303)
+++||+++++.+|+.|+++.|++.++
T Consensus 584 ~giyni~~~~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 584 RGIWNFTNPGVVSHNEILEMYKDYID 609 (668)
T ss_pred CceEEecCCCcCcHHHHHHHHHHhcC
Confidence 46999999999999999999999884
No 70
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.93 E-value=1.6e-24 Score=223.26 Aligned_cols=244 Identities=17% Similarity=0.163 Sum_probs=179.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC----CeEEEeecCCCcccc--cchh---------cCCCCceEEEecCCCC----
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVR--DLRL---------CGDLGQVLFQPYHPRN---- 77 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~--~~~~---------~~~~~~~~~~~~Dl~d---- 77 (303)
..++|+|||||||+|++++++|++++ ++|+++.|....... .+.. .....+++++.+|+.+
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 35799999999999999999999887 899999997543211 1100 0012469999999974
Q ss_pred --HHHHHHHhcccCEEEEccccCccccch-hhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-------------
Q psy4233 78 --DDEIRKAIKYSNVVINLIGREFATKNF-TIADANVEIPARLARLSKEMGVEKFIHISALNADPNP------------- 141 (303)
Q Consensus 78 --~~~~~~~~~~~D~vi~~a~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------------- 141 (303)
.+.+..+..++|+|||+|+......+. .+...|+.++.+++++|.+.++++++|+||.++++..
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence 466777778899999999975543333 4456799999999999999999999999999887421
Q ss_pred -----CCC-----CCCCCCchhHHHHHHHHHHHhh---CCCEEEEeecceeeCCCch----hhHHHHHHHhhhcceeeec
Q psy4233 142 -----PTY-----YISGGSQFYRTKYQGEKEVLRE---FPEATIFRPSDMYGSGDKF----LRYYGHMWRHVFRKLAVYK 204 (303)
Q Consensus 142 -----~~~-----~~~~~~~y~~~K~~~e~~~~~~---~~~~~ilrp~~~~G~~~~~----~~~~~~~~~~~~~~~~~~~ 204 (303)
+.. +..+.+.|+.+|+.+|.++... +++++++||+.+||+.... ...+..++.. ......++
T Consensus 1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~-~~~~~~~p 1208 (1389)
T TIGR03443 1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKG-CIQLGLIP 1208 (1389)
T ss_pred CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHH-HHHhCCcC
Confidence 111 1123467999999999998774 7999999999999985431 2233333321 11223333
Q ss_pred CCCceeeCceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233 205 KGEETIKQPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 205 ~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 263 (303)
.+... ++|++++|+|++++.++.++. ..+.+||+.++..+++.++++.+.+ +|.+.+
T Consensus 1209 ~~~~~-~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~~ 1267 (1389)
T TIGR03443 1209 NINNT-VNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKT-YGYDVE 1267 (1389)
T ss_pred CCCCc-cccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCCC
Confidence 44445 799999999999999987653 2346899999999999999999976 466554
No 71
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.93 E-value=5.1e-24 Score=173.74 Aligned_cols=243 Identities=14% Similarity=0.009 Sum_probs=187.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-c--cchhcCCC--CceEEEecCCCCHHHHHHHhcc--cCE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-R--DLRLCGDL--GQVLFQPYHPRNDDEIRKAIKY--SNV 90 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~--~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~--~D~ 90 (303)
+++.||||-||+-|++|++.|+++||+|.++.|+..... . .+...+.. ++++++.+|++|...+.++++. +|.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 678999999999999999999999999999999743322 2 12222222 4488999999999999999886 899
Q ss_pred EEEccccC----ccccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEecCccCCC------CCCCCCCCCCchhHHHHH
Q psy4233 91 VINLIGRE----FATKNFTIADANVEIPARLARLSKEMGV--EKFIHISALNADPN------PPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 91 vi~~a~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K~~ 158 (303)
|+|+|+++ +++.|....+++-.++.+|+++.+..+. .||...||...||. .|.+|..|.+||+.+|..
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY 161 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY 161 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence 99999974 4567888999999999999999998764 38999999888885 577899999999999999
Q ss_pred HHHHHHh----hCCCEEEEeecceeeCCCc--h-hhHHHHH---HHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 159 GEKEVLR----EFPEATIFRPSDMYGSGDK--F-LRYYGHM---WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 159 ~e~~~~~----~~~~~~ilrp~~~~G~~~~--~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
+-.+... +|+-.+.-+..+--+|..+ | ...+... ++.........|+-+-. +||-|..|.+++++.+++
T Consensus 162 a~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAk-RDWG~A~DYVe~mwlmLQ 240 (345)
T COG1089 162 AYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAK-RDWGHAKDYVEAMWLMLQ 240 (345)
T ss_pred HHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecccccc-ccccchHHHHHHHHHHHc
Confidence 9886654 4666665555554455332 2 1112211 11122233344444445 999999999999999999
Q ss_pred CCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCC
Q psy4233 229 DPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 229 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 263 (303)
++. ...|.++.+++.|.+|+++...+..|....
T Consensus 241 q~~--PddyViATg~t~sVrefv~~Af~~~g~~l~ 273 (345)
T COG1089 241 QEE--PDDYVIATGETHSVREFVELAFEMVGIDLE 273 (345)
T ss_pred cCC--CCceEEecCceeeHHHHHHHHHHHcCceEE
Confidence 865 558999999999999999999999995433
No 72
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.92 E-value=2.1e-24 Score=184.20 Aligned_cols=234 Identities=19% Similarity=0.155 Sum_probs=164.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhc-----------CCCCceEEEecCCC------CHHH
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLC-----------GDLGQVLFQPYHPR------NDDE 80 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~------d~~~ 80 (303)
++||+||||||+|.+++++|+.+- .+|+|++|..++....-++. ....+++++.+|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999999876 59999999866432221111 12367999999998 4577
Q ss_pred HHHHhcccCEEEEccccC-ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCC--------C--CC----
Q psy4233 81 IRKAIKYSNVVINLIGRE-FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPP--------T--YY---- 145 (303)
Q Consensus 81 ~~~~~~~~D~vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~--------~--~~---- 145 (303)
+..+.+.+|.|||+++.. ...........|+.++..+++.|...+.|.+.|+||+++.+... + .|
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV 160 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence 888888899999999974 45666789999999999999999999999999999999965421 1 01
Q ss_pred -CCCCCchhHHHHHHHHHHHhh---CCCEEEEeecceeeCCC-c---hhhHHHHHHHh--hhcceeeecCCCceeeCcee
Q psy4233 146 -ISGGSQFYRTKYQGEKEVLRE---FPEATIFRPSDMYGSGD-K---FLRYYGHMWRH--VFRKLAVYKKGEETIKQPVY 215 (303)
Q Consensus 146 -~~~~~~y~~~K~~~e~~~~~~---~~~~~ilrp~~~~G~~~-~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ 215 (303)
....++|++||+.+|..+++. |++++|+|||++.|+.. + ...++.++... .-+.+|.. ... .+.+.
T Consensus 161 ~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~---~~~-~~~~p 236 (382)
T COG3320 161 GQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS---EYS-LDMLP 236 (382)
T ss_pred cCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc---ccc-hhhCc
Confidence 123589999999999999986 79999999999999744 1 12222233322 23333321 222 33344
Q ss_pred HHHHHH-----------HHHHHhcCCCCCCcEEE-EeCCcccCHHHHHHHHHH
Q psy4233 216 VGDVAA-----------AIVAACKDPDAAGKIYQ-AVGPKRYLLSELLDWFHV 256 (303)
Q Consensus 216 ~~Dva~-----------~~~~~~~~~~~~g~~~~-i~~~~~~s~~e~~~~i~~ 256 (303)
++.+++ ++..+..++...-+.|+ ...|..+...++.+++.+
T Consensus 237 ~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 237 VDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred cceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 333333 33333322222122444 344788999999999988
No 73
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.92 E-value=3.7e-23 Score=174.63 Aligned_cols=216 Identities=16% Similarity=0.123 Sum_probs=157.8
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh--cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
++++++|+||||||+||++++++|+++|++|+++.|+.....+.... .....+++++.+|+.|.+++.++++
T Consensus 3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 35578999999999999999999999999998888875543222211 1112458899999999998887764
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|+|||++|.... ......+++|+.++.++++++ ++.+.+++|++||...+... .....|+
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~-----~~~~~y~ 157 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW-----PGRSNYA 157 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-----CCchHHH
Confidence 47999999995322 123467788999999988887 55677899999998887432 3356899
Q ss_pred HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|...+.+++. .+++++++||+.++++........ .... ..... .. ..+++.+|+++++..+
T Consensus 158 ~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~-~~~~-~~~~~-------~~-~~~~~~~dva~~~~~~ 227 (249)
T PRK12825 158 AAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE-AREA-KDAET-------PL-GRSGTPEDIARAVAFL 227 (249)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch-hHHh-hhccC-------CC-CCCcCHHHHHHHHHHH
Confidence 999988877654 379999999999999864322111 1110 10011 11 3489999999999999
Q ss_pred hcCC--CCCCcEEEEeCCccc
Q psy4233 227 CKDP--DAAGKIYQAVGPKRY 245 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~~~~~ 245 (303)
++++ ...|+.|+++++..+
T Consensus 228 ~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 228 CSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred hCccccCcCCCEEEeCCCEee
Confidence 9764 346899999988654
No 74
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.91 E-value=9e-24 Score=181.54 Aligned_cols=226 Identities=17% Similarity=0.127 Sum_probs=163.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV 90 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~ 90 (303)
.+++|||||+|+||++++++|+++|++|++++|+.... +.+... ...+++++.+|++|.+++.++++ ++|+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL-DDLKAR-YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh-ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999999975322 221111 12468999999999998887664 3799
Q ss_pred EEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 91 VINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
|||++|.... ......+++|+.++.++++++ ++.+.+++|++||.+.... ..+.+.|+.+|+.
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~a 154 (276)
T PRK06482 80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----YPGFSLYHATKWG 154 (276)
T ss_pred EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----CCCCchhHHHHHH
Confidence 9999986422 122457789999999999997 5566779999999776431 2345789999999
Q ss_pred HHHHHHh-------hCCCEEEEeecce---eeCCCchh---h-----HHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233 159 GEKEVLR-------EFPEATIFRPSDM---YGSGDKFL---R-----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA 220 (303)
Q Consensus 159 ~e~~~~~-------~~~~~~ilrp~~~---~G~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 220 (303)
.|.+++. ++++++++|||.+ ||++.... . ....+.+. ...+.. .-+.+++|++
T Consensus 155 ~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~d~~~~~ 225 (276)
T PRK06482 155 IEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRA-------LADGSF--AIPGDPQKMV 225 (276)
T ss_pred HHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHH-------HhhccC--CCCCCHHHHH
Confidence 9987764 3789999999988 55432110 0 00011110 001111 1246899999
Q ss_pred HHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 221 AAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
++++.++.++.. +..|++++++..+..|+++.+.+.++.
T Consensus 226 ~a~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 264 (276)
T PRK06482 226 QAMIASADQTPA-PRRLTLGSDAYASIRAALSERLAALEA 264 (276)
T ss_pred HHHHHHHcCCCC-CeEEecChHHHHHHHHHHHHHHHHHHH
Confidence 999999986544 557999999888888888888777754
No 75
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.91 E-value=3.6e-23 Score=176.37 Aligned_cols=221 Identities=13% Similarity=0.023 Sum_probs=155.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKY------- 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------- 87 (303)
++++++|||||+|+||++++++|+++|++|+++.|++....+..... ....++.++++|++|.+.+.+++++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999999999764322221111 1123578899999999988876653
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcch----HHHHHHHH-HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEI----PARLARLS-KEMGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|+|||++|.... ...+..+++|+.+ +.++++++ +..+.+++|++||...+.. ..+...|+.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~y~~ 159 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA-----SPLKSAYVT 159 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC-----CCCCcccHH
Confidence 8999999996432 1233567789998 66677777 6667789999999766542 134578999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh-----hhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH-----VFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
+|...+.+++.. +++++++||+.+++|.... .+...... ......+++.+... .+|++++|++++
T Consensus 160 sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a 236 (262)
T PRK13394 160 AKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDK--QIPEQAKELGISEEEVVKKVMLGKTVD-GVFTTVEDVAQT 236 (262)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhh--hhHhhhhccCCChHHHHHHHHhcCCCC-CCCCCHHHHHHH
Confidence 999998877653 6899999999999885321 11111100 00001122223333 689999999999
Q ss_pred HHHHhcCCC--CCCcEEEEeCCcc
Q psy4233 223 IVAACKDPD--AAGKIYQAVGPKR 244 (303)
Q Consensus 223 ~~~~~~~~~--~~g~~~~i~~~~~ 244 (303)
++.++.... ..|+.|++.++..
T Consensus 237 ~~~l~~~~~~~~~g~~~~~~~g~~ 260 (262)
T PRK13394 237 VLFLSSFPSAALTGQSFVVSHGWF 260 (262)
T ss_pred HHHHcCccccCCcCCEEeeCCcee
Confidence 999997543 2478898887643
No 76
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.91 E-value=9.9e-23 Score=175.06 Aligned_cols=234 Identities=16% Similarity=0.090 Sum_probs=166.9
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
+|++++++||||+|+||+++++.|+++|++|++++|+......... ......++.++.+|+.|++++.++++
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999987543221111 11112468889999999998887765
Q ss_pred --ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 87 --YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 --~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
++|++||++|.... ......+++|+.++.++++++.+. +..+++++||...+.. ..+.+.
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~ 158 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-----HRWFGA 158 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-----CCCCcc
Confidence 57999999985311 123457788999999998876543 3358999999887642 133578
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|+.+|...|.+++.. +++++++|||.+.++................... .. ..+++++|+|++++
T Consensus 159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~dva~~~~ 230 (276)
T PRK05875 159 YGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACT-------PL-PRVGEVEDVANLAM 230 (276)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCC-------CC-CCCcCHHHHHHHHH
Confidence 999999999988764 5889999999988764321110001100000011 11 34688999999999
Q ss_pred HHhcCCCC--CCcEEEEeCCccc----CHHHHHHHHHHHhcCC
Q psy4233 225 AACKDPDA--AGKIYQAVGPKRY----LLSELLDWFHVVMKKG 261 (303)
Q Consensus 225 ~~~~~~~~--~g~~~~i~~~~~~----s~~e~~~~i~~~~g~~ 261 (303)
++++++.. .|+++++++++.+ +..|+++.+.+..|..
T Consensus 231 ~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 273 (276)
T PRK05875 231 FLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR 273 (276)
T ss_pred HHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence 99986543 4889999998876 8888888887766554
No 77
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.4e-22 Score=171.45 Aligned_cols=222 Identities=22% Similarity=0.238 Sum_probs=173.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
|+||||||||++|++++++|+++|++|++++|++....... .++++..+|+.++..+...+++.|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 58999999999999999999999999999999865433322 469999999999999999999999999998865
Q ss_pred ccccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCEEEEeec
Q psy4233 99 FATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEATIFRPS 176 (303)
Q Consensus 99 ~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~ 176 (303)
. ... ........ ++++.+++. ++++++++|...... .....|..+|..+|+.+.+.+++++++|+.
T Consensus 75 ~-~~~-~~~~~~~~---~~~~~a~~a~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~e~~l~~sg~~~t~lr~~ 142 (275)
T COG0702 75 D-GSD-AFRAVQVT---AVVRAAEAAGAGVKHGVSLSVLGADA-------ASPSALARAKAAVEAALRSSGIPYTTLRRA 142 (275)
T ss_pred c-ccc-chhHHHHH---HHHHHHHHhcCCceEEEEeccCCCCC-------CCccHHHHHHHHHHHHHHhcCCCeEEEecC
Confidence 4 322 23333333 344455543 477999999888766 345799999999999999999999999977
Q ss_pred ceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHH
Q psy4233 177 DMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHV 256 (303)
Q Consensus 177 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~ 256 (303)
.+|....... .. .. .....+....+... .+++..+|++.++...+..+...+++|.+.+++..+..++++.+..
T Consensus 143 ~~~~~~~~~~--~~-~~--~~~~~~~~~~~~~~-~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~ 216 (275)
T COG0702 143 AFYLGAGAAF--IE-AA--EAAGLPVIPRGIGR-LSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDY 216 (275)
T ss_pred eeeeccchhH--HH-HH--HhhCCceecCCCCc-eeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHH
Confidence 7775433322 11 11 22232333323333 7899999999999999998777788999999999999999999999
Q ss_pred HhcCCCCC
Q psy4233 257 VMKKGEPD 264 (303)
Q Consensus 257 ~~g~~~~~ 264 (303)
..|++..+
T Consensus 217 ~~gr~~~~ 224 (275)
T COG0702 217 TIGRPVGL 224 (275)
T ss_pred HhCCccee
Confidence 99999873
No 78
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.91 E-value=6.6e-23 Score=173.35 Aligned_cols=220 Identities=15% Similarity=0.134 Sum_probs=154.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
+++++++||||+|+||++++++|+++|++|++++|+.....+.+. +.....++.++.+|++|++++..+++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 567899999999999999999999999999999987543222111 11112357889999999999887765
Q ss_pred ccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHH
Q psy4233 87 YSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKE 162 (303)
Q Consensus 87 ~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~ 162 (303)
++|+|||+++... ...+...+++|+.++.++++++...- ..++|++||..........+.....+|+.+|..+|.+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~ 163 (248)
T PRK07806 84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDA 163 (248)
T ss_pred CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHH
Confidence 4899999998532 22355678899999999999998642 2489999996553211111112256899999999998
Q ss_pred HHhh-------CCCEEEEeecceeeCCCchh-h-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCC
Q psy4233 163 VLRE-------FPEATIFRPSDMYGSGDKFL-R-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAA 233 (303)
Q Consensus 163 ~~~~-------~~~~~ilrp~~~~G~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~ 233 (303)
++.. ++++++++|+.+-+|..... . ...... .....+ . ..+++++|+|++++.+++.+...
T Consensus 164 ~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~--~~~~~~-------~-~~~~~~~dva~~~~~l~~~~~~~ 233 (248)
T PRK07806 164 LRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAI--EARREA-------A-GKLYTVSEFAAEVARAVTAPVPS 233 (248)
T ss_pred HHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHH--HHHHhh-------h-cccCCHHHHHHHHHHHhhccccC
Confidence 8774 57888888887665521100 0 000000 000111 1 36899999999999999976668
Q ss_pred CcEEEEeCCccc
Q psy4233 234 GKIYQAVGPKRY 245 (303)
Q Consensus 234 g~~~~i~~~~~~ 245 (303)
|++|++.+++..
T Consensus 234 g~~~~i~~~~~~ 245 (248)
T PRK07806 234 GHIEYVGGADYF 245 (248)
T ss_pred ccEEEecCccce
Confidence 999999988753
No 79
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.7e-23 Score=179.69 Aligned_cols=227 Identities=12% Similarity=0.047 Sum_probs=163.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
++++|+||||+|+||++++++|+++|++|++++|+.....+..... ..++.++++|++|.+++.++++ ++|
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY--GDRLLPLALDVTDRAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc--cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999999999999999999999999999999754322111111 2358889999999988877654 479
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+|||++|.... +..+..+++|+.++..+++++ ++.+.+++|++||...+... .....|+.+|.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----~~~~~Y~~sKa 154 (275)
T PRK08263 80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF-----PMSGIYHASKW 154 (275)
T ss_pred EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC-----CCccHHHHHHH
Confidence 99999996422 234567889999988877775 55667799999998776532 23468999999
Q ss_pred HHHHHHHh-------hCCCEEEEeecceeeCCCch-------hhHHHHHHHhhhcceeeecCCCceeeCc-eeHHHHHHH
Q psy4233 158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKF-------LRYYGHMWRHVFRKLAVYKKGEETIKQP-VYVGDVAAA 222 (303)
Q Consensus 158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~Dva~~ 222 (303)
..+.+.+. .+++++++|||.+..+.... ......+....... ... ..+ ++.+|+|++
T Consensus 155 a~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~p~dva~~ 226 (275)
T PRK08263 155 ALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ-------WSE-RSVDGDPEAAAEA 226 (275)
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH-------HHh-ccCCCCHHHHHHH
Confidence 98877654 37999999999887654310 01111110000001 111 345 899999999
Q ss_pred HHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233 223 IVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258 (303)
Q Consensus 223 ~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~ 258 (303)
++.+++.+...+..|+..+++.+++.++.+.+.+..
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (275)
T PRK08263 227 LLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE 262 (275)
T ss_pred HHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence 999999776666555555567899999999988864
No 80
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.90 E-value=1.9e-22 Score=170.70 Aligned_cols=216 Identities=14% Similarity=0.085 Sum_probs=155.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++|+||||+|++|.+++++|+++|++|++++|+......... ......+++++.+|+.|.+++.+.++ .
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 457899999999999999999999999999999997543222111 11112458899999999998888775 5
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||+++.... ...+..++.|+.++.++++++. +.+.+++|++||...+.. +......|+.+
T Consensus 84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----~~~~~~~y~~s 159 (251)
T PRK12826 84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----GYPGLAHYAAS 159 (251)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----CCCCccHHHHH
Confidence 8999999986432 2234578899999999998873 455679999999887621 12345689999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|..++.+++.. +++++++||+.++||........ .+........++ ..+++++|+|++++.++.
T Consensus 160 K~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~ 230 (251)
T PRK12826 160 KAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA-QWAEAIAAAIPL--------GRLGEPEDIAAAVLFLAS 230 (251)
T ss_pred HHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch-HHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhC
Confidence 99988877663 68999999999999854321110 000001111221 257999999999999887
Q ss_pred CCC--CCCcEEEEeCCcc
Q psy4233 229 DPD--AAGKIYQAVGPKR 244 (303)
Q Consensus 229 ~~~--~~g~~~~i~~~~~ 244 (303)
... ..|++|++.+|..
T Consensus 231 ~~~~~~~g~~~~~~~g~~ 248 (251)
T PRK12826 231 DEARYITGQTLPVDGGAT 248 (251)
T ss_pred ccccCcCCcEEEECCCcc
Confidence 542 3688999987653
No 81
>PRK09135 pteridine reductase; Provisional
Probab=99.90 E-value=4e-22 Score=168.53 Aligned_cols=215 Identities=14% Similarity=0.137 Sum_probs=151.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcC-CCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCG-DLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~-~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+++++|+||||+|+||++++++|+++|++|++++|+..+..+... ... ....++++.+|++|.+++..+++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 455799999999999999999999999999999987543322211 111 11358899999999999888776
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
++|+|||++|.... ...+..+++|+.++.++++++... ....++.+++.... .|..+...|+.
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Y~~ 158 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE-----RPLKGYPVYCA 158 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc-----CCCCCchhHHH
Confidence 37999999985321 223568889999999999998642 12356666654332 24456789999
Q ss_pred HHHHHHHHHHhh------CCCEEEEeecceeeCCCch--hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 155 TKYQGEKEVLRE------FPEATIFRPSDMYGSGDKF--LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 155 ~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
+|..+|.+++.+ +++++++||+.++||.... ....... .....++ ..+.+++|+|++++.+
T Consensus 159 sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~d~a~~~~~~ 227 (249)
T PRK09135 159 AKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQA---ILARTPL--------KRIGTPEDIAEAVRFL 227 (249)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHH---HHhcCCc--------CCCcCHHHHHHHHHHH
Confidence 999999988764 4789999999999987532 1111111 1111111 1234689999999776
Q ss_pred hcCC-CCCCcEEEEeCCcccC
Q psy4233 227 CKDP-DAAGKIYQAVGPKRYL 246 (303)
Q Consensus 227 ~~~~-~~~g~~~~i~~~~~~s 246 (303)
+.+. ...|++|++++++.++
T Consensus 228 ~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 228 LADASFITGQILAVDGGRSLT 248 (249)
T ss_pred cCccccccCcEEEECCCeecc
Confidence 6543 3468899999988765
No 82
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.90 E-value=2.8e-22 Score=170.41 Aligned_cols=220 Identities=13% Similarity=0.062 Sum_probs=151.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++|+||||+|+||++++++|+++|++|++++|++......... .....+++++.+|+.|.+++.++++ .
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4567999999999999999999999999999999975433221111 1112468899999999999887765 4
Q ss_pred cCEEEEccccCccc--------cchhhhhhhcchHH----HHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFAT--------KNFTIADANVEIPA----RLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~----~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||+++..... .....+++|+.++. .++.++++.+.++||++||...+.. ....+.|+.+
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----~~~~~~y~~~ 156 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG-----SAGKAAYVSA 156 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----CCCcchhHHH
Confidence 79999999863221 12345678888844 4555555667889999999866542 2446789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhh-----cceeeecCCCceeeCceeHHHHHHHH
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVF-----RKLAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
|...+.+.+.. +++++++||+.+++|.... .+........ .....+...... ..+++++|+|+++
T Consensus 157 k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~ 233 (258)
T PRK12429 157 KHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK--QIPDLAKERGISEEEVLEDVLLPLVPQ-KRFTTVEEIADYA 233 (258)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh--hhhhhccccCCChHHHHHHHHhccCCc-cccCCHHHHHHHH
Confidence 99888777643 6889999999999875321 1111100000 000011112223 5799999999999
Q ss_pred HHHhcCCC--CCCcEEEEeCCc
Q psy4233 224 VAACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 224 ~~~~~~~~--~~g~~~~i~~~~ 243 (303)
+.++.... ..|+.|++.++-
T Consensus 234 ~~l~~~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 234 LFLASFAAKGVTGQAWVVDGGW 255 (258)
T ss_pred HHHcCccccCccCCeEEeCCCE
Confidence 99987533 357889888764
No 83
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.90 E-value=7.1e-22 Score=166.57 Aligned_cols=215 Identities=15% Similarity=0.111 Sum_probs=154.4
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY------ 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 87 (303)
.|++++|+||||+|++|++++++|+++|++|++++|++........ ......+++++.+|+.|++++.+++++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4566899999999999999999999999999999997543221111 111124588999999999988777654
Q ss_pred -cCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 -SNVVINLIGREFAT--------KNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 -~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|+|||++|..... .....++.|+.++.++++++. +.+.+++|++||...... ..+...|+.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-----~~~~~~y~~ 156 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-----NPGQTNYSA 156 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC-----CCCCcHhHh
Confidence 59999999863321 224567889999999988884 556789999999865432 234578999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
+|...+.+++.. +++++++||+.++++......... .......++ . ..+++.+|+|++++.++
T Consensus 157 sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~--~~~~~~~~~-------~-~~~~~~~dva~~~~~~~ 226 (246)
T PRK05653 157 AKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEV--KAEILKEIP-------L-GRLGQPEEVANAVAFLA 226 (246)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHH--HHHHHhcCC-------C-CCCcCHHHHHHHHHHHc
Confidence 999887776653 689999999999988654211111 110111122 1 45799999999999999
Q ss_pred cCC--CCCCcEEEEeCCcc
Q psy4233 228 KDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 228 ~~~--~~~g~~~~i~~~~~ 244 (303)
... ...|+.|++++|.-
T Consensus 227 ~~~~~~~~g~~~~~~gg~~ 245 (246)
T PRK05653 227 SDAASYITGQVIPVNGGMY 245 (246)
T ss_pred CchhcCccCCEEEeCCCee
Confidence 753 33688999988763
No 84
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.89 E-value=6.1e-22 Score=168.18 Aligned_cols=218 Identities=16% Similarity=0.106 Sum_probs=155.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIKY------- 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------- 87 (303)
+++++++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|++|.+++..++++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999997543222111111 123588899999999988887753
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... +..+..+++|+.++.++++++.+. +.+++|++||..... +......|+.+
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----~~~~~~~y~~s 162 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL-----ARPGIAPYTAT 162 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-----CCCCCccHHHH
Confidence 7999999986422 122456779999999999988643 567999999976543 22345789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+++.. ++++.+++|+.+.++..........+........+ . ..+...+|+|++++.++.
T Consensus 163 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l~~ 234 (255)
T PRK07523 163 KGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP-------A-GRWGKVEELVGACVFLAS 234 (255)
T ss_pred HHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHcC
Confidence 99999887753 68999999999998753211000111110111222 1 346889999999999997
Q ss_pred CCC--CCCcEEEEeCCcccC
Q psy4233 229 DPD--AAGKIYQAVGPKRYL 246 (303)
Q Consensus 229 ~~~--~~g~~~~i~~~~~~s 246 (303)
.+. ..|+.+++.++..+|
T Consensus 235 ~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 235 DASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred chhcCccCcEEEECCCeecc
Confidence 532 368899998887655
No 85
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.89 E-value=5.4e-22 Score=168.70 Aligned_cols=225 Identities=12% Similarity=0.006 Sum_probs=160.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------cCE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------SNV 90 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D~ 90 (303)
+++++||||+|+||.++++.|+++|++|++++|+....... .......+++++.+|+.|.+++..++.+ +|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAF-ADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999999975432211 1111123588999999999998877653 799
Q ss_pred EEEccccCccc--------cchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 91 VINLIGREFAT--------KNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 91 vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
|||++|..... .......+|+.++.++++++ .+.+..++|++||...... .....|+.+|..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------~~~~~y~~sK~a 154 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA------LGHPAYSAAKAG 154 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC------CCCcccHHHHHH
Confidence 99999863221 11234668899888888877 3345568999999755431 123579999999
Q ss_pred HHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 159 GEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
.+.+++.+ +++++.++||.++++.... ......+....... ... .++++++|++++++.++...
T Consensus 155 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~d~a~~~~~l~~~~ 226 (257)
T PRK07074 155 LIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW-------YPL-QDFATPDDVANAVLFLASPA 226 (257)
T ss_pred HHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc-------CCC-CCCCCHHHHHHHHHHHcCch
Confidence 99887764 5889999999998874321 00001111100001 112 57899999999999999642
Q ss_pred --CCCCcEEEEeCCcccCHHHHHHHHHHH
Q psy4233 231 --DAAGKIYQAVGPKRYLLSELLDWFHVV 257 (303)
Q Consensus 231 --~~~g~~~~i~~~~~~s~~e~~~~i~~~ 257 (303)
...|+.+++.++...+..|+++.+.+.
T Consensus 227 ~~~~~g~~~~~~~g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 227 ARAITGVCLPVDGGLTAGNREMARTLTLE 255 (257)
T ss_pred hcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence 335888899999989999999887653
No 86
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.89 E-value=6.4e-22 Score=167.90 Aligned_cols=217 Identities=18% Similarity=0.135 Sum_probs=150.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHh-------cccC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAI-------KYSN 89 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~-------~~~D 89 (303)
++++|||||+|+||++++++|+++|++|++++|+........... ....+++++.+|+.|.+++..++ .++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 368999999999999999999999999999999754322111111 11245889999999999665544 4479
Q ss_pred EEEEccccCccc--------cchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFAT--------KNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+|||+++..... ..+..+..|+.++..+++++ ++.+++++|++||...+... .....|+.+|.
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~-----~~~~~y~~sk~ 155 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS-----PFKSAYVAAKH 155 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC-----CCCchhHHHHH
Confidence 999999864321 12345678888887777776 56677899999998665431 23478999999
Q ss_pred HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhccee-------eecCCCceeeCceeHHHHHHHH
Q psy4233 158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLA-------VYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
..+.+++.. +++++++||+.+++|... ..+..... ....+ ....+... .++++++|+|+++
T Consensus 156 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~ 230 (255)
T TIGR01963 156 GLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE--KQIADQAK--TRGIPEEQVIREVMLPGQPT-KRFVTVDEVAETA 230 (255)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH--HHHHhhhc--ccCCCchHHHHHHHHccCcc-ccCcCHHHHHHHH
Confidence 988877643 689999999999987422 11111110 00110 01122333 5799999999999
Q ss_pred HHHhcCC--CCCCcEEEEeCCcc
Q psy4233 224 VAACKDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 224 ~~~~~~~--~~~g~~~~i~~~~~ 244 (303)
+.++.+. ...|+.|++.++..
T Consensus 231 ~~~~~~~~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 231 LFLASDAAAGITGQAIVLDGGWT 253 (255)
T ss_pred HHHcCccccCccceEEEEcCccc
Confidence 9999763 23577899987653
No 87
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.89 E-value=4.6e-22 Score=169.14 Aligned_cols=223 Identities=11% Similarity=-0.006 Sum_probs=156.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++++||||+|+||.+++++|+++|++|++++|+........... ..+++++.+|++|.+++.++++ .+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI--GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45679999999999999999999999999999998754322211111 1358899999999998887765 47
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcC-----CceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMG-----VEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
|++||+++.... ...+..+++|+.++.++++++.... -.++|++||...... ..+...|+.+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~s 156 (257)
T PRK07067 82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG-----EALVSHYCAT 156 (257)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC-----CCCCchhhhh
Confidence 999999986321 2334678899999999999986431 248999999754321 1345789999
Q ss_pred HHHHHHHHHh-------hCCCEEEEeecceeeCCCchh-hHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFL-RYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
|...+.+.+. .+++++.++||.++++..... ..+...... .......++.+... ..+++.+|+|++++.+
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l 235 (257)
T PRK07067 157 KAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPL-GRMGVPDDLTGMALFL 235 (257)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCC-CCccCHHHHHHHHHHH
Confidence 9998888764 368999999999998743211 111110000 00001112222223 5789999999999999
Q ss_pred hcCCC--CCCcEEEEeCCcccC
Q psy4233 227 CKDPD--AAGKIYQAVGPKRYL 246 (303)
Q Consensus 227 ~~~~~--~~g~~~~i~~~~~~s 246 (303)
+.... ..|++|++.+|+.+|
T Consensus 236 ~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 236 ASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred hCcccccccCcEEeecCCEeCC
Confidence 97543 368899998887553
No 88
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.2e-21 Score=164.19 Aligned_cols=215 Identities=13% Similarity=0.079 Sum_probs=154.4
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
.+++++++||||+|+||.+++++|+++|++|++++|+........... ....++.++.+|++|.+++..+++
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG 82 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 356789999999999999999999999999999999754321111111 112357889999999988877664
Q ss_pred ccCEEEEccccCcc-----------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 87 YSNVVINLIGREFA-----------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 ~~D~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
.+|+|||++|.... ......+++|+.++.++++++... +.+++|++||..++. +.+.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------~~~~ 154 (250)
T PRK07774 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--------YSNF 154 (250)
T ss_pred CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC--------Cccc
Confidence 47999999996321 122356789999999999988753 346999999988864 3478
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|+.+|...|.+++.. ++.+++++||.+..+....... ..+.....+..+. .-+.+.+|+|++++
T Consensus 155 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~d~a~~~~ 225 (250)
T PRK07774 155 YGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP-KEFVADMVKGIPL--------SRMGTPEDLVGMCL 225 (250)
T ss_pred cHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC-HHHHHHHHhcCCC--------CCCcCHHHHHHHHH
Confidence 999999999887764 5789999999988775431110 0111111112221 12567899999999
Q ss_pred HHhcCCC--CCCcEEEEeCCcccC
Q psy4233 225 AACKDPD--AAGKIYQAVGPKRYL 246 (303)
Q Consensus 225 ~~~~~~~--~~g~~~~i~~~~~~s 246 (303)
.++.... ..|++|++.+++.++
T Consensus 226 ~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 226 FLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred HHhChhhhCcCCCEEEECCCeecc
Confidence 9987532 368899999887654
No 89
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.88 E-value=4e-21 Score=163.90 Aligned_cols=220 Identities=13% Similarity=0.077 Sum_probs=150.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
++.+++|||||+|+||++++++|+++|++|++++|+.....+....... .+++++.+|+.|++++.++++ ++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-AKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999999999999999999999999999999974432221111111 157899999999998877664 58
Q ss_pred CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCC-ceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 89 NVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGV-EKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 89 D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
|+|||++|.... ......++.|+.++.++++++ +..+. ++++++||...... ......|+.
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~-----~~~~~~y~~ 162 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG-----YPGRTPYAA 162 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC-----CCCCchhHH
Confidence 999999996411 123567889999999988877 33444 57888887654321 123467999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceee----ecCCCceeeCceeHHHHHHHH
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV----YKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~Dva~~~ 223 (303)
+|...|.+++.. +++++++|||++++|.... ............... ....... ..+++++|+|+++
T Consensus 163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~ 239 (264)
T PRK12829 163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR--VIEARAQQLGIGLDEMEQEYLEKISL-GRMVEPEDIAATA 239 (264)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH--HhhhhhhccCCChhHHHHHHHhcCCC-CCCCCHHHHHHHH
Confidence 999999887663 6899999999999885431 111100000000000 0000111 3589999999999
Q ss_pred HHHhcC--CCCCCcEEEEeCCcc
Q psy4233 224 VAACKD--PDAAGKIYQAVGPKR 244 (303)
Q Consensus 224 ~~~~~~--~~~~g~~~~i~~~~~ 244 (303)
+.++.. ....|+.|++.++..
T Consensus 240 ~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 240 LFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred HHHcCccccCccCcEEEeCCCcc
Confidence 998864 233688999988764
No 90
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.88 E-value=3.3e-21 Score=164.12 Aligned_cols=212 Identities=14% Similarity=0.126 Sum_probs=145.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++++||||+|+||++++++|+++|++|++++|+... .+... ......++.++.+|++|.+++.++++ +
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR 84 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 567899999999999999999999999999999986421 11111 11112357889999999888776654 4
Q ss_pred cCEEEEccccCcc---------ccchhhhhhhcchHHHHHH----HHHhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 SNVVINLIGREFA---------TKNFTIADANVEIPARLAR----LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|++||+||.... ......+++|+.++..+++ .+++.+..+||++||...++ ....+|+.
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------~~~~~Y~~ 157 (260)
T PRK12823 85 IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG-------INRVPYSA 157 (260)
T ss_pred CeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC-------CCCCccHH
Confidence 7999999984211 1223456778777665544 44455667999999988764 23468999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-----------hHHHHHHHhhhcceeeecCCCceeeCceeH
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-----------RYYGHMWRHVFRKLAVYKKGEETIKQPVYV 216 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 216 (303)
+|...+.+++.. +++++.++||.+++|..... ..+..+........++ .-+.+.
T Consensus 158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 229 (260)
T PRK12823 158 AKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM--------KRYGTI 229 (260)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc--------ccCCCH
Confidence 999999888763 68999999999998742110 0011111111111111 235689
Q ss_pred HHHHHHHHHHhcCCC--CCCcEEEEeCCc
Q psy4233 217 GDVAAAIVAACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 217 ~Dva~~~~~~~~~~~--~~g~~~~i~~~~ 243 (303)
+|+|++++.++..+. ..|+.+++.+++
T Consensus 230 ~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 230 DEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred HHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 999999999987542 368899997765
No 91
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.88 E-value=2.6e-21 Score=162.50 Aligned_cols=206 Identities=15% Similarity=0.106 Sum_probs=151.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
++++++|||||+|+||++++++|+++|++|++++|+.....+...... ...++++.+|+.|.+++..+++ ++
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVP-ADALRIGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHh-hcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 457899999999999999999999999999999997644322221111 1347888999999988877665 48
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
|+|||+++.... ......++.|+.++.++++++. +.+.+++|++||...+... .+...|+.+|
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~y~~sk 158 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----PGMGAYAAAK 158 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----CCcchhHHHH
Confidence 999999986321 1123457789999999888774 4567899999999887632 3346899999
Q ss_pred HHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
...+.+++. .++++..+|||.++++.... ..+. ... ..+++.+|+|++++.++.+
T Consensus 159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~-------------~~~~----~~~-~~~~~~~dva~~~~~~l~~ 220 (239)
T PRK12828 159 AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA-------------DMPD----ADF-SRWVTPEQIAAVIAFLLSD 220 (239)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh-------------cCCc----hhh-hcCCCHHHHHHHHHHHhCc
Confidence 988877754 26899999999999873221 0000 111 3479999999999999985
Q ss_pred CC--CCCcEEEEeCCccc
Q psy4233 230 PD--AAGKIYQAVGPKRY 245 (303)
Q Consensus 230 ~~--~~g~~~~i~~~~~~ 245 (303)
.. ..|+.+.+.+++..
T Consensus 221 ~~~~~~g~~~~~~g~~~~ 238 (239)
T PRK12828 221 EAQAITGASIPVDGGVAL 238 (239)
T ss_pred ccccccceEEEecCCEeC
Confidence 42 35888888887643
No 92
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=1.9e-21 Score=164.82 Aligned_cols=219 Identities=12% Similarity=0.050 Sum_probs=153.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-ch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-LR-LCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
++++++|+||||+|+||++++++|+++|++|++..|+....... .. ......++..+.+|+++++++..+++
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY 82 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence 45678999999999999999999999999998877654322211 11 11111357788999999988877655
Q ss_pred -ccCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 87 -YSNVVINLIGREFAT--------KNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 87 -~~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
++|+|||++|..... ..+..+++|+.+..++++++.+. ...++|++||...+. +..+.+.|+.+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~~~~Y~~s 157 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----PAYGLSIYGAM 157 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----CCCCchHHHHH
Confidence 479999999962211 11356789999999999888753 225899999988765 23456789999
Q ss_pred HHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHH-HHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...|.+++.+ ++.+.+++||.+.++.......+... .....+... .. ..+++++|+|++++.+++
T Consensus 158 K~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~dva~~~~~~~~ 230 (252)
T PRK06077 158 KAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFT------LM-GKILDPEEVAEFVAAILK 230 (252)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcC------cC-CCCCCHHHHHHHHHHHhC
Confidence 99999888764 57888999999987632211000000 000001111 11 368999999999999998
Q ss_pred CCCCCCcEEEEeCCccc
Q psy4233 229 DPDAAGKIYQAVGPKRY 245 (303)
Q Consensus 229 ~~~~~g~~~~i~~~~~~ 245 (303)
.....|++|++.+++.+
T Consensus 231 ~~~~~g~~~~i~~g~~~ 247 (252)
T PRK06077 231 IESITGQVFVLDSGESL 247 (252)
T ss_pred ccccCCCeEEecCCeec
Confidence 66667889999988653
No 93
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=5.5e-21 Score=161.76 Aligned_cols=217 Identities=13% Similarity=0.075 Sum_probs=151.8
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
.+.+++++||||+|+||.+++++|+++|++|++++|+...............++.++.+|+.|++++..+++ .
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS 81 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 356789999999999999999999999999999999864332221111112358899999999999987765 3
Q ss_pred cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|+|||++|.... ...+..+++|+.++..+.+.+. +.+.++||++||...+.. ..+...|+.
T Consensus 82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~y~~ 156 (251)
T PRK07231 82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP-----RPGLGWYNA 156 (251)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC-----CCCchHHHH
Confidence 6999999986322 1234578888888777776665 356679999999887652 234578999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH--HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY--YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+|...+.+++.. +++++.++||.+.++....... ........... ... ..+++++|+|.+++.
T Consensus 157 sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~dva~~~~~ 228 (251)
T PRK07231 157 SKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT-------IPL-GRLGTPEDIANAALF 228 (251)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC-------CCC-CCCcCHHHHHHHHHH
Confidence 999988877653 6899999999997664221100 00000000011 111 357899999999999
Q ss_pred HhcCCC--CCCcEEEEeCCcc
Q psy4233 226 ACKDPD--AAGKIYQAVGPKR 244 (303)
Q Consensus 226 ~~~~~~--~~g~~~~i~~~~~ 244 (303)
++..+. ..|..+.+.++..
T Consensus 229 l~~~~~~~~~g~~~~~~gg~~ 249 (251)
T PRK07231 229 LASDEASWITGVTLVVDGGRC 249 (251)
T ss_pred HhCccccCCCCCeEEECCCcc
Confidence 997543 2577788876643
No 94
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.88 E-value=8.7e-21 Score=161.13 Aligned_cols=213 Identities=15% Similarity=0.040 Sum_probs=151.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-hhc-CCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++||||+|+||++++++|+++|++|++++|+........ ... ....++.++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999999999998754321111 111 112358899999999988776654 47
Q ss_pred CEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHhc-----C-----CceEEEEecCccCCCCCCCCCCC
Q psy4233 89 NVVINLIGREFA----------TKNFTIADANVEIPARLARLSKEM-----G-----VEKFIHISALNADPNPPTYYISG 148 (303)
Q Consensus 89 D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~-----~-----~~~~v~~Ss~~~~~~~~~~~~~~ 148 (303)
|+|||++|.... ...+..+++|+.++.++++++... + ..++|++||...... ..+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~ 156 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV-----SPN 156 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC-----CCC
Confidence 999999986321 233457889999999998887542 1 457999999876542 134
Q ss_pred CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233 149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA 220 (303)
Q Consensus 149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 220 (303)
...|+.+|...|.+++.. ++++++++||.+.++.... ...+.... .....+ . ..+.+.+|+|
T Consensus 157 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~--~~~~~~-------~-~~~~~~~d~a 226 (256)
T PRK12745 157 RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALI--AKGLVP-------M-PRWGEPEDVA 226 (256)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhh--hhcCCC-------c-CCCcCHHHHH
Confidence 578999999999877653 6899999999999875321 11111111 111111 1 3578999999
Q ss_pred HHHHHHhcCCC--CCCcEEEEeCCccc
Q psy4233 221 AAIVAACKDPD--AAGKIYQAVGPKRY 245 (303)
Q Consensus 221 ~~~~~~~~~~~--~~g~~~~i~~~~~~ 245 (303)
+++..++.... ..|+.|++.++...
T Consensus 227 ~~i~~l~~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 227 RAVAALASGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred HHHHHHhCCcccccCCCEEEECCCeec
Confidence 99999886432 35889999887543
No 95
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.88 E-value=3.1e-21 Score=166.15 Aligned_cols=220 Identities=16% Similarity=0.128 Sum_probs=151.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
|++++++||||+|++|+++++.|+++|++|++++|+......... ......+++++.+|++|++++.+ ++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 346789999999999999999999999999999997543222111 11112468999999999988765 42
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|+|||++|.... ......+++|+.++.++++++ ++.+..++|++||...... ..+...|+
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~-----~~~~~~Y~ 154 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG-----FPGLSPYV 154 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC-----CCCCchhH
Confidence 37999999986332 122356778999988888875 5666779999999755432 13457899
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-----------hHHHHHHHhhhcceeeecCCCceeeCcee
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-----------RYYGHMWRHVFRKLAVYKKGEETIKQPVY 215 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 215 (303)
.+|...+.+++.. +++++++|||.+++|..... ..+..........+. ... ..+++
T Consensus 155 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~ 228 (280)
T PRK06914 155 SSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHIN-----SGS-DTFGN 228 (280)
T ss_pred HhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHh-----hhh-hccCC
Confidence 9999999877653 79999999999988732100 000001000000000 111 35789
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEeCCcccCHH
Q psy4233 216 VGDVAAAIVAACKDPDAAGKIYQAVGPKRYLLS 248 (303)
Q Consensus 216 ~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~ 248 (303)
++|+|++++.+++++... ..|++.++..+++.
T Consensus 229 ~~dva~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 260 (280)
T PRK06914 229 PIDVANLIVEIAESKRPK-LRYPIGKGVKLMIL 260 (280)
T ss_pred HHHHHHHHHHHHcCCCCC-cccccCCchHHHHH
Confidence 999999999999976554 47888776665544
No 96
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1e-20 Score=160.52 Aligned_cols=214 Identities=17% Similarity=0.153 Sum_probs=149.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
+++++|+||||+|+||++++++|+++|++|+++ .|+......... ......+++++.+|++|++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 456899999999999999999999999999875 454322111111 11112358899999999999887766
Q ss_pred ------ccCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233 87 ------YSNVVINLIGREFAT--------KNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGS 150 (303)
Q Consensus 87 ------~~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~ 150 (303)
++|+|||++|..... ..+..+++|+.++.++++++... ...++|++||..++.. .....
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~-----~~~~~ 158 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG-----FTGSI 158 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC-----CCCCc
Confidence 489999999863221 11356779999999999988753 3358999999888652 23457
Q ss_pred chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233 151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
.|+.+|...+.+++.. ++++++++||.+++|.......-.......... ... ..+++++|+|+++
T Consensus 159 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~dva~~~ 230 (254)
T PRK12746 159 AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS-------SVF-GRIGQVEDIADAV 230 (254)
T ss_pred chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc-------CCc-CCCCCHHHHHHHH
Confidence 8999999999876542 689999999999887432110000000000001 111 3567999999999
Q ss_pred HHHhcCCC--CCCcEEEEeCC
Q psy4233 224 VAACKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 224 ~~~~~~~~--~~g~~~~i~~~ 242 (303)
..++.++. ..|++|++.++
T Consensus 231 ~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 231 AFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred HHHcCcccCCcCCCEEEeCCC
Confidence 98887543 25889999766
No 97
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=4.7e-21 Score=162.20 Aligned_cols=216 Identities=16% Similarity=0.091 Sum_probs=149.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
|++++++||||+|+||+++++.|+++|++|+++ .|+.....+... ......++.++.+|++|++++..+++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 346799999999999999999999999998764 665432211111 11112458899999999998887765
Q ss_pred ccCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 87 YSNVVINLIGREFAT--------KNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 87 ~~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
.+|+|||++|..... .....+++|+.++.++++++.. .+.++||++||...+.. ..+...|+.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~y~~ 156 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-----LENYTTVGV 156 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----CCCccHHHH
Confidence 379999999863221 1123567899999888888864 34569999999766532 234578999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
+|...|.+++.. +++++.++||.+..+...................+ . ..+++.+|+|++++.++
T Consensus 157 sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~~~ 228 (250)
T PRK08063 157 SKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP-------A-GRMVEPEDVANAVLFLC 228 (250)
T ss_pred HHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC-------C-CCCcCHHHHHHHHHHHc
Confidence 999999988763 68999999999987642211111111110111111 1 34799999999999999
Q ss_pred cCCC--CCCcEEEEeCCcc
Q psy4233 228 KDPD--AAGKIYQAVGPKR 244 (303)
Q Consensus 228 ~~~~--~~g~~~~i~~~~~ 244 (303)
..+. ..|+.+++.++..
T Consensus 229 ~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 229 SPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred CchhcCccCCEEEECCCee
Confidence 7543 3588898887764
No 98
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.87 E-value=5.9e-21 Score=164.14 Aligned_cols=215 Identities=14% Similarity=0.111 Sum_probs=147.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
++++|+||||+|+||++++++|+++|++|++++|+..... .+... ...++..+.+|++|.+++.++++ ++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~l~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA-DFEAL-HPDRALARLLDVTDFDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH-HHHhh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999999999999999999999754322 11111 12358889999999998887766 379
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+|||+||.... ......+++|+.++.++++++ ++.+.+++|++||...... ..+...|+.+|.
T Consensus 81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~-----~~~~~~Y~~sK~ 155 (277)
T PRK06180 81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT-----MPGIGYYCGSKF 155 (277)
T ss_pred EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC-----CCCcchhHHHHH
Confidence 99999996322 112356889999999999985 3445669999999877642 134578999999
Q ss_pred HHHHHHHh-------hCCCEEEEeecceeeCCCc--------hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 158 QGEKEVLR-------EFPEATIFRPSDMYGSGDK--------FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
..|.+++. .+++++++|||.+.++... ....+......... .... ... ..+.+++|+|++
T Consensus 156 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~-~~~~~~~dva~~ 230 (277)
T PRK06180 156 ALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQ-AREA---KSG-KQPGDPAKAAQA 230 (277)
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHH-HHHh---hcc-CCCCCHHHHHHH
Confidence 99887765 3799999999999875321 01111111100000 0000 011 346789999999
Q ss_pred HHHHhcCCCCCCcEEEEeCCccc
Q psy4233 223 IVAACKDPDAAGKIYQAVGPKRY 245 (303)
Q Consensus 223 ~~~~~~~~~~~g~~~~i~~~~~~ 245 (303)
++.++..+.. ...| +.+++..
T Consensus 231 ~~~~l~~~~~-~~~~-~~g~~~~ 251 (277)
T PRK06180 231 ILAAVESDEP-PLHL-LLGSDAL 251 (277)
T ss_pred HHHHHcCCCC-CeeE-eccHHHH
Confidence 9999986544 3234 4444443
No 99
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.87 E-value=1.1e-20 Score=144.86 Aligned_cols=202 Identities=14% Similarity=0.106 Sum_probs=155.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
|||.|+||||.+|++|+++++.+||+|++++|++.+.... +++..++.|+.|++.+.+.+.+.|+||..-+..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 7999999999999999999999999999999986543332 458899999999999999999999999998876
Q ss_pred ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCC-----CCCCCCCCCchhHHHHHHH--HHHHhh-CCCE
Q psy4233 99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNP-----PTYYISGGSQFYRTKYQGE--KEVLRE-FPEA 170 (303)
Q Consensus 99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~-----~~~~~~~~~~y~~~K~~~e--~~~~~~-~~~~ 170 (303)
........ ......|++.++++++.|++.++..+...-. .+.|.-|...|..++..+| +.++.. .++|
T Consensus 74 ~~~~~~~~----~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~W 149 (211)
T COG2910 74 ASDNDELH----SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDW 149 (211)
T ss_pred CCChhHHH----HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcce
Confidence 44333323 2336689999999999999999988875433 2345556667777888887 455553 6999
Q ss_pred EEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEe
Q psy4233 171 TIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAV 240 (303)
Q Consensus 171 ~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~ 240 (303)
+.+-|+.++.|+.+...+. .++...+.+... -++|+..|.|-+++..++++....+.|.+.
T Consensus 150 TfvSPaa~f~PGerTg~yr------lggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h~rqRftv~ 210 (211)
T COG2910 150 TFVSPAAFFEPGERTGNYR------LGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQHIRQRFTVA 210 (211)
T ss_pred EEeCcHHhcCCccccCceE------eccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence 9999999999976543331 334444443322 256999999999999999888777777653
No 100
>PLN02253 xanthoxin dehydrogenase
Probab=99.87 E-value=1.5e-20 Score=161.83 Aligned_cols=227 Identities=14% Similarity=0.057 Sum_probs=153.3
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
..+++++++||||+|+||++++++|+++|++|++++|+.....+.........+++++++|++|.+++.++++
T Consensus 14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 3456789999999999999999999999999999988643322211111222468999999999999888775
Q ss_pred ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccC-CCCCCCCCCCCCc
Q psy4233 87 YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNAD-PNPPTYYISGGSQ 151 (303)
Q Consensus 87 ~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~-~~~~~~~~~~~~~ 151 (303)
++|+|||+||.... +..+..+++|+.++.++++++.. .+..++|++||.... +. .....
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------~~~~~ 167 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG------LGPHA 167 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC------CCCcc
Confidence 58999999986321 22356899999999998887753 233478998887653 32 22358
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch---h-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF---L-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVA 220 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 220 (303)
|+.+|...|.+.+.. ++.+..++||.+.++.... . ......+... ..............++.+|+|
T Consensus 168 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~dva 244 (280)
T PLN02253 168 YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGF---RAFAGKNANLKGVELTVDDVA 244 (280)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhh---HHHhhcCCCCcCCCCCHHHHH
Confidence 999999999988763 6888999999987753210 0 0000000000 000000000002347899999
Q ss_pred HHHHHHhcCCC--CCCcEEEEeCCcccCHHH
Q psy4233 221 AAIVAACKDPD--AAGKIYQAVGPKRYLLSE 249 (303)
Q Consensus 221 ~~~~~~~~~~~--~~g~~~~i~~~~~~s~~e 249 (303)
++++.++.... ..|+.+++.++...+..+
T Consensus 245 ~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~ 275 (280)
T PLN02253 245 NAVLFLASDEARYISGLNLMIDGGFTCTNHS 275 (280)
T ss_pred HHHHhhcCcccccccCcEEEECCchhhccch
Confidence 99999987532 368889998876554433
No 101
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.87 E-value=5e-21 Score=162.16 Aligned_cols=218 Identities=13% Similarity=0.087 Sum_probs=150.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++++||||+|+||++++++|+++|++|+++.|+.....+.........++.++++|++|++++.++++ ++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 55789999999999999999999999999999999754332221111112458899999999999887665 58
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
|+|||+++.... ...+..+.+|+.++.++.+++ ++.+.++++++||....... .....|+.+|
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----~~~~~Y~~sK 157 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG-----RGRAAYVASK 157 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-----CCccHHHHHH
Confidence 999999996322 122345788999887666654 55667799999998664321 3357899999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
...+.+++.. ++++++++||.++++.... .+..... ......... .......+++.+|+|++++.++.+
T Consensus 158 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~d~a~~~~~l~~~ 233 (252)
T PRK06138 158 GAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR--IFARHAD-PEALREALR-ARHPMNRFGTAEEVAQAALFLASD 233 (252)
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh--hhccccC-hHHHHHHHH-hcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999887764 6899999999999874321 0000000 000000000 011112478999999999999986
Q ss_pred CCC--CCcEEEEeCC
Q psy4233 230 PDA--AGKIYQAVGP 242 (303)
Q Consensus 230 ~~~--~g~~~~i~~~ 242 (303)
+.. .|..+.+.++
T Consensus 234 ~~~~~~g~~~~~~~g 248 (252)
T PRK06138 234 ESSFATGTTLVVDGG 248 (252)
T ss_pred hhcCccCCEEEECCC
Confidence 432 5777777655
No 102
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.87 E-value=2.2e-20 Score=157.61 Aligned_cols=214 Identities=16% Similarity=0.153 Sum_probs=149.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-h-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
++++++++||||||++|+++++.|+++|++|+++.|+........ . ......++.++.+|++|.+++.++++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 456789999999999999999999999999988888754321111 1 11122468899999999998887665
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|+|||++|.... ...+..+..|+.++.++++++.. .+.+++|++||....... .....|+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~-----~~~~~y~ 156 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN-----PGQANYA 156 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC-----CCCchhH
Confidence 47999999986322 12235677899999999888864 345689999997543221 2346899
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|...+.+++.. ++++++++||.+.++..... ............+ . ..+.+.+|+|+++..+
T Consensus 157 ~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~-------~-~~~~~~~~va~~~~~l 226 (248)
T PRK05557 157 ASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIP-------L-GRLGQPEEIASAVAFL 226 (248)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHH
Confidence 9999988766542 68999999998876533211 1111110111111 1 3468999999999998
Q ss_pred hcC--CCCCCcEEEEeCCc
Q psy4233 227 CKD--PDAAGKIYQAVGPK 243 (303)
Q Consensus 227 ~~~--~~~~g~~~~i~~~~ 243 (303)
+.. ....|+.|+++++.
T Consensus 227 ~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 227 ASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred cCcccCCccccEEEecCCc
Confidence 865 33468899998764
No 103
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1e-20 Score=162.41 Aligned_cols=231 Identities=11% Similarity=-0.017 Sum_probs=153.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKY------- 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------- 87 (303)
+++++++||||+|+||+++++.|+++|++|++.+|+.....+..... ....++.++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 56789999999999999999999999999999998754322211111 1123578899999999988877653
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcC-CceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMG-VEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|+|||+||.... +..+..+++|+.++.++++++. +.+ ..++|++||...+.. ..+...|+.
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a 158 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-----NAGLGAYGV 158 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-----CCCCchHHH
Confidence 7999999996321 2234567899999999998874 333 358999999887642 244578999
Q ss_pred HHHHHHHHHH----hh---CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 155 TKYQGEKEVL----RE---FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 155 ~K~~~e~~~~----~~---~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
+|..++.+.+ +. ++++++++||.+.++......................+..... .++++++|+|++++.++
T Consensus 159 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~ai 237 (275)
T PRK05876 159 AKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQ-DDNLGVDDIAQLTADAI 237 (275)
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCcccccccccccccccccc-ccCCCHHHHHHHHHHHH
Confidence 9997544433 32 7899999999998774321111000000011111222322333 57899999999999999
Q ss_pred cCCCCCCcEEEEeCCcccCHHHHHHHHHHHh
Q psy4233 228 KDPDAAGKIYQAVGPKRYLLSELLDWFHVVM 258 (303)
Q Consensus 228 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~ 258 (303)
.++ +.|.+.+ ......+.+.+.+..
T Consensus 238 ~~~----~~~~~~~--~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 238 LAN----RLYVLPH--AASRASIRRRFERID 262 (275)
T ss_pred HcC----CeEEecC--hhhHHHHHHHHHHHH
Confidence 753 3454543 344455555544443
No 104
>PRK06194 hypothetical protein; Provisional
Probab=99.87 E-value=1.1e-20 Score=163.26 Aligned_cols=215 Identities=11% Similarity=0.008 Sum_probs=145.1
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKY------ 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 87 (303)
+++++++|||||+|+||++++++|+++|++|++++|+.....+.... .....+++++.+|++|.+++.+++++
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35678999999999999999999999999999999864322211111 11123578899999999999887763
Q ss_pred -cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCC------ceEEEEecCccCCCCCCCCCCC
Q psy4233 88 -SNVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGV------EKFIHISALNADPNPPTYYISG 148 (303)
Q Consensus 88 -~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~------~~~v~~Ss~~~~~~~~~~~~~~ 148 (303)
+|+|||+||.... ......+++|+.++.+++++ +.+.+. .++|++||...+... ..
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~ 157 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-----PA 157 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----CC
Confidence 7999999997432 22335688999999997777 344433 489999998777532 34
Q ss_pred CCchhHHHHHHHHHHHhh----C-----CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233 149 GSQFYRTKYQGEKEVLRE----F-----PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV 219 (303)
Q Consensus 149 ~~~y~~~K~~~e~~~~~~----~-----~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 219 (303)
...|+.+|...+.+++.+ + +++..+.||.+..+..... ..+...+.+++.+. ++|++++|.
T Consensus 158 ~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~ 227 (287)
T PRK06194 158 MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE---------RNRPADLANTAPPT-RSQLIAQAM 227 (287)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc---------ccCchhcccCcccc-chhhHHHHH
Confidence 468999999999988753 2 4455666665543311100 22344555555555 677777776
Q ss_pred HHHHHHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcC
Q psy4233 220 AAAIVAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKK 260 (303)
Q Consensus 220 a~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~ 260 (303)
+.++.... .++..|+++.+.+.++.
T Consensus 228 ~~~~~~~~----------------~~s~~dva~~i~~~~~~ 252 (287)
T PRK06194 228 SQKAVGSG----------------KVTAEEVAQLVFDAIRA 252 (287)
T ss_pred HHhhhhcc----------------CCCHHHHHHHHHHHHHc
Confidence 66543210 15677777777666543
No 105
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.87 E-value=1.1e-20 Score=159.57 Aligned_cols=213 Identities=15% Similarity=0.139 Sum_probs=151.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-h-hcCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIKY------ 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 87 (303)
+++++++||||+|+||++++++|+++|++|+++.++.....+.. . ......++.++.+|++|.+++.+++++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 55789999999999999999999999999987665433322211 1 111124588999999999988887765
Q ss_pred -cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 -SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 -~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|+|||++|.... ......+++|+.++.++++++.. .+..++|++||....... .+...|+.
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~ 158 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----FGQTNYSA 158 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----CCCcchHH
Confidence 7999999996332 23346788999999999998864 334599999997665321 34578999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
+|...+.+.+.. ++++++++||.+.++...... ......... .... ..+.+++|++++++.++
T Consensus 159 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~-------~~~~-~~~~~~edva~~~~~~~ 228 (247)
T PRK12935 159 AKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP--EEVRQKIVA-------KIPK-KRFGQADEIAKGVVYLC 228 (247)
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc--HHHHHHHHH-------hCCC-CCCcCHHHHHHHHHHHc
Confidence 999888776553 789999999999865322110 001000000 1122 46899999999999998
Q ss_pred cCCC-CCCcEEEEeCCc
Q psy4233 228 KDPD-AAGKIYQAVGPK 243 (303)
Q Consensus 228 ~~~~-~~g~~~~i~~~~ 243 (303)
+... ..|+.|++.++.
T Consensus 229 ~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 229 RDGAYITGQQLNINGGL 245 (247)
T ss_pred CcccCccCCEEEeCCCc
Confidence 7532 468899998774
No 106
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.8e-20 Score=158.36 Aligned_cols=210 Identities=13% Similarity=0.125 Sum_probs=150.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-----hcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-----LCGDLGQVLFQPYHPRNDDEIRKAIK---- 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 86 (303)
+++|+++||||+|+||++++++|+++|++|+++.|......+... ......+++++.+|+.|.+++.+.++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999998764322211111 01112458899999999998887764
Q ss_pred ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH-----hcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233 87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK-----EMGVEKFIHISALNADPNPPTYYISGGS 150 (303)
Q Consensus 87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~ 150 (303)
++|+|||++|.... ......+++|+.++.++++++. +.+.+++|++||...+... .+..
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~ 158 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN-----RGQV 158 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC-----CCCc
Confidence 48999999996431 1224577899999999999987 4566799999998776421 3457
Q ss_pred chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233 151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
.|+.+|...+.+++.. ++++++++||.+.++........... ....+. ..+.+.+|+|+++
T Consensus 159 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~----~~~~~~--------~~~~~~~~va~~~ 226 (249)
T PRK12827 159 NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHL----LNPVPV--------QRLGEPDEVAALV 226 (249)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHH----HhhCCC--------cCCcCHHHHHHHH
Confidence 8999999888776653 79999999999998754321111111 111111 2246889999999
Q ss_pred HHHhcCC--CCCCcEEEEeCC
Q psy4233 224 VAACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 224 ~~~~~~~--~~~g~~~~i~~~ 242 (303)
+.++... ...|+.+++.++
T Consensus 227 ~~l~~~~~~~~~g~~~~~~~g 247 (249)
T PRK12827 227 AFLVSDAASYVTGQVIPVDGG 247 (249)
T ss_pred HHHcCcccCCccCcEEEeCCC
Confidence 9998653 235778888765
No 107
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.7e-20 Score=161.05 Aligned_cols=213 Identities=17% Similarity=0.107 Sum_probs=148.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+.+++++||||+|+||++++++|+++|++|++++|+.....+... ......+++++.+|++|.+++.++++ +
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 446799999999999999999999999999999986533211111 11111358889999999999887765 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ......+++|+.++.++++++. +.+..+||++||...+... .....|+.+
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~s 162 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR-----PHMGAYGAA 162 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----CCcchHHHH
Confidence 7999999986322 1223456899999999988864 3345689999998777532 234689999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeC-CCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGS-GDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
|...|.+++.. +++++++|||.+.++ +.... ........ . ...++ +... ..+++++|+|++++.+
T Consensus 163 K~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~-~---~~~~~-~~~~-~~~~~~~dva~a~~~~ 236 (274)
T PRK07775 163 KAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLE-D---WAKWG-QARH-DYFLRASDLARAITFV 236 (274)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHH-H---HHHhc-cccc-ccccCHHHHHHHHHHH
Confidence 99999988763 789999999987654 22111 11111111 0 00111 1122 4689999999999999
Q ss_pred hcCCCCCCcEEEEe
Q psy4233 227 CKDPDAAGKIYQAV 240 (303)
Q Consensus 227 ~~~~~~~g~~~~i~ 240 (303)
++++. .+.+||+.
T Consensus 237 ~~~~~-~~~~~~~~ 249 (274)
T PRK07775 237 AETPR-GAHVVNME 249 (274)
T ss_pred hcCCC-CCCeeEEe
Confidence 98653 35577774
No 108
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.86 E-value=2.1e-20 Score=157.70 Aligned_cols=211 Identities=17% Similarity=0.057 Sum_probs=150.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVVI 92 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~vi 92 (303)
+++++++||||+|+||+++++.|+++|++|++++|+..... .+... .+.+++.+|++|.+++.++++. +|+||
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALD-RLAGE---TGCEPLRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHH---hCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 55689999999999999999999999999999999753322 11111 2367889999999988887764 89999
Q ss_pred EccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233 93 NLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQG 159 (303)
Q Consensus 93 ~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~ 159 (303)
|++|.... ...+..+.+|+.++.++++++.+. + ..++|++||...+... .....|+.+|..+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~y~~sK~a~ 157 (245)
T PRK07060 83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL-----PDHLAYCASKAAL 157 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC-----CCCcHhHHHHHHH
Confidence 99986422 123356678999999999888653 2 3589999998776421 3446899999999
Q ss_pred HHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC-
Q psy4233 160 EKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD- 231 (303)
Q Consensus 160 e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~- 231 (303)
|.+++.. +++++.++|+.++++...................+ . ..+++.+|+|++++.++..+.
T Consensus 158 ~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~d~a~~~~~l~~~~~~ 229 (245)
T PRK07060 158 DAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIP-------L-GRFAEVDDVAAPILFLLSDAAS 229 (245)
T ss_pred HHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCC-------C-CCCCCHHHHHHHHHHHcCcccC
Confidence 9977653 68999999999998753210000000000001111 1 457999999999999997543
Q ss_pred -CCCcEEEEeCCc
Q psy4233 232 -AAGKIYQAVGPK 243 (303)
Q Consensus 232 -~~g~~~~i~~~~ 243 (303)
..|+.+++.++.
T Consensus 230 ~~~G~~~~~~~g~ 242 (245)
T PRK07060 230 MVSGVSLPVDGGY 242 (245)
T ss_pred CccCcEEeECCCc
Confidence 358888887654
No 109
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.86 E-value=2.4e-20 Score=157.78 Aligned_cols=214 Identities=14% Similarity=0.084 Sum_probs=150.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
++++++||||+|+||++++++|+++|++|++++|+.....+.... .....+++++.+|+.|.+++.++++ ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999875432221111 1112458999999999998887765 48
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
|+|||+++.... ...+..+++|+.++.++++++. +.+.+++|++||...+... .....|+.+|
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~-----~~~~~Y~~sK 156 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS-----SGEAVYAACK 156 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC-----CCCchHHHHH
Confidence 999999985321 1223568899999999888774 4566799999999887532 2346899999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhh----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
...+.+++.. ++++++++||.++++...... .-..+.......++ . ..+...+|+|+++..
T Consensus 157 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~ 228 (250)
T TIGR03206 157 GGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP-------L-GRLGQPDDLPGAILF 228 (250)
T ss_pred HHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC-------c-cCCcCHHHHHHHHHH
Confidence 8888777653 699999999999987322100 00001110111121 1 235788999999999
Q ss_pred HhcCCC--CCCcEEEEeCCc
Q psy4233 226 ACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 226 ~~~~~~--~~g~~~~i~~~~ 243 (303)
++..+. ..|++++++++.
T Consensus 229 l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 229 FSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred HcCcccCCCcCcEEEeCCCc
Confidence 987543 258899997764
No 110
>PRK06128 oxidoreductase; Provisional
Probab=99.86 E-value=3.7e-20 Score=160.94 Aligned_cols=218 Identities=12% Similarity=0.087 Sum_probs=154.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccc-hh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDL-RL-CGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~-~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
++++++|||||+|+||++++++|+++|++|++..++.... .+.. .. .....++.++.+|++|.+++.++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4568999999999999999999999999998877653221 1111 11 1112357889999999988877664
Q ss_pred -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
++|+|||+||.... +.....+++|+.++.++++++... .-.+||++||...+... .....|+.
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~a 207 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS-----PTLLDYAS 207 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC-----CCchhHHH
Confidence 47999999996321 234568999999999999998753 12489999999887531 23467999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
+|...+.+++.. ++++.+++||.+.+|...................+ . ..+.+.+|+|.+++.++
T Consensus 208 sK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p~dva~~~~~l~ 279 (300)
T PRK06128 208 TKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP-------M-KRPGQPVEMAPLYVLLA 279 (300)
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC-------C-CCCcCHHHHHHHHHHHh
Confidence 999999887763 78999999999998853211111111110111112 1 34689999999999998
Q ss_pred cCCC--CCCcEEEEeCCcccC
Q psy4233 228 KDPD--AAGKIYQAVGPKRYL 246 (303)
Q Consensus 228 ~~~~--~~g~~~~i~~~~~~s 246 (303)
.... ..|+.|++.++..++
T Consensus 280 s~~~~~~~G~~~~v~gg~~~~ 300 (300)
T PRK06128 280 SQESSYVTGEVFGVTGGLLLS 300 (300)
T ss_pred CccccCccCcEEeeCCCEeCc
Confidence 7533 268899998886543
No 111
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.86 E-value=4.1e-20 Score=156.59 Aligned_cols=216 Identities=12% Similarity=-0.006 Sum_probs=151.8
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY------- 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------- 87 (303)
.+++++++||||+|+||++++++|+++|++|++++|+.. .. ...+++++++|+.|.+++.+++++
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~------~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL------TQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh------hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 356789999999999999999999999999999999751 11 124588999999999998887754
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ......+++|+.++.++++++.. .+..++|++||..... +..+...|+.+
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----~~~~~~~Y~~s 151 (252)
T PRK08220 77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----PRIGMAAYGAS 151 (252)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----CCCCCchhHHH
Confidence 7999999986322 23346788999999999988743 3445899999986653 22345789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
|...+.+++.. ++++++++||.+++|.............. ..........+... ..+++++|+|++++.++
T Consensus 152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~ 230 (252)
T PRK08220 152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL-GKIARPQEIANAVLFLA 230 (252)
T ss_pred HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCC-cccCCHHHHHHHHHHHh
Confidence 99999887653 68999999999998853211000000000 00000000011112 45799999999999999
Q ss_pred cCC--CCCCcEEEEeCCcc
Q psy4233 228 KDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 228 ~~~--~~~g~~~~i~~~~~ 244 (303)
... ...|++..+.++..
T Consensus 231 ~~~~~~~~g~~i~~~gg~~ 249 (252)
T PRK08220 231 SDLASHITLQDIVVDGGAT 249 (252)
T ss_pred cchhcCccCcEEEECCCee
Confidence 753 34677777777643
No 112
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.86 E-value=3.1e-20 Score=154.80 Aligned_cols=200 Identities=15% Similarity=0.080 Sum_probs=139.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCEEEE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNVVIN 93 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~vi~ 93 (303)
+||+++||||+|++|++++++|+++ ++|++++|+..+.. .+.. ..++++++++|+.|.+++.++++ ++|+|||
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~-~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLD-ELAA--ELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHH-HHHH--HhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 4679999999999999999999999 99999999754321 1111 12358899999999999998887 4899999
Q ss_pred ccccCccc--------cchhhhhhhcchH----HHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHH
Q psy4233 94 LIGREFAT--------KNFTIADANVEIP----ARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEK 161 (303)
Q Consensus 94 ~a~~~~~~--------~~~~~~~~n~~~~----~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~ 161 (303)
++|..... .....++.|+.+. .++++++++.+ +++|++||..++... .+...|+.+|...+.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~-----~~~~~y~~~K~a~~~ 151 (227)
T PRK08219 78 NAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRAN-----PGWGSYAASKFALRA 151 (227)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcC-----CCCchHHHHHHHHHH
Confidence 99864321 1234567777774 44555555443 589999998776532 335789999999988
Q ss_pred HHHhh-----C-CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCc
Q psy4233 162 EVLRE-----F-PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGK 235 (303)
Q Consensus 162 ~~~~~-----~-~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~ 235 (303)
+++.. . +++..++||.+.++.... ........ ... ..+++.+|+|++++.+++++. .+.
T Consensus 152 ~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~------~~~~~~~~-------~~~-~~~~~~~dva~~~~~~l~~~~-~~~ 216 (227)
T PRK08219 152 LADALREEEPGNVRVTSVHPGRTDTDMQRG------LVAQEGGE-------YDP-ERYLRPETVAKAVRFAVDAPP-DAH 216 (227)
T ss_pred HHHHHHHHhcCCceEEEEecCCccchHhhh------hhhhhccc-------cCC-CCCCCHHHHHHHHHHHHcCCC-CCc
Confidence 77653 4 788888888766542211 10001111 111 457999999999999998654 355
Q ss_pred EEEEeC
Q psy4233 236 IYQAVG 241 (303)
Q Consensus 236 ~~~i~~ 241 (303)
++++.-
T Consensus 217 ~~~~~~ 222 (227)
T PRK08219 217 ITEVVV 222 (227)
T ss_pred cceEEE
Confidence 777653
No 113
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.86 E-value=2.4e-20 Score=158.72 Aligned_cols=219 Identities=13% Similarity=0.063 Sum_probs=149.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++|+||||+|+||+++++.|+++|++|++++|+....... +.......+++++.+|++|.+++.+++. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999999999999875432211 1111111358999999999988876654 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCcc-CCCCCCCCCCCCCchh
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNA-DPNPPTYYISGGSQFY 153 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~ 153 (303)
+|+|||++|.... ......+++|+.++.++++++.. .+ -.++|++||... ++. .....|+
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------~~~~~Y~ 155 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------KHNSGYS 155 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------CCCchhH
Confidence 7999999985321 12345678999998877776643 34 358999998654 332 2346899
Q ss_pred HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhh----hcceeeecCCCceeeCceeHHHHHHH
Q psy4233 154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHV----FRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
.+|+..+.+++. .++++.+++||.++++.... ..+....... ......+..+... ..+++.+|++++
T Consensus 156 ~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dv~~~ 233 (259)
T PRK12384 156 AAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ-SLLPQYAKKLGIKPDEVEQYYIDKVPL-KRGCDYQDVLNM 233 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh-hhhHHHHHhcCCChHHHHHHHHHhCcc-cCCCCHHHHHHH
Confidence 999998777655 36999999999988753221 2222211100 0011112222233 568999999999
Q ss_pred HHHHhcCCC--CCCcEEEEeCCcc
Q psy4233 223 IVAACKDPD--AAGKIYQAVGPKR 244 (303)
Q Consensus 223 ~~~~~~~~~--~~g~~~~i~~~~~ 244 (303)
++.++.+.. ..|+.|++.+++.
T Consensus 234 ~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 234 LLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred HHHHcCcccccccCceEEEcCCEE
Confidence 999987542 3688999988764
No 114
>PRK09186 flagellin modification protein A; Provisional
Probab=99.86 E-value=3.3e-20 Score=157.52 Aligned_cols=214 Identities=11% Similarity=0.047 Sum_probs=145.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh---cCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL---CGDLGQVLFQPYHPRNDDEIRKAIKY----- 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 87 (303)
+++++|+||||+|+||+++++.|+++|++|+++.|+.....+.... ......+.++.+|+.|++++.+++++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999875432211111 11123467789999999998887764
Q ss_pred --cCEEEEccccCcc-----------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCC-----CCCC
Q psy4233 88 --SNVVINLIGREFA-----------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNP-----PTYY 145 (303)
Q Consensus 88 --~D~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~-----~~~~ 145 (303)
+|+|||+|+.... ......+++|+.++..+++++ ++.+.+++|++||......+ +..+
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~ 161 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS 161 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence 7999999974211 122356677777776555544 45566799999997664321 1222
Q ss_pred CCCCCchhHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233 146 ISGGSQFYRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD 218 (303)
Q Consensus 146 ~~~~~~y~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 218 (303)
......|+.+|...+.+.+. .++++++++||.++++... . +.... ....+ . ..+++.+|
T Consensus 162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~--~-~~~~~---~~~~~-------~-~~~~~~~d 227 (256)
T PRK09186 162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE--A-FLNAY---KKCCN-------G-KGMLDPDD 227 (256)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH--H-HHHHH---HhcCC-------c-cCCCCHHH
Confidence 22234799999999988754 2689999999988765321 1 11111 11111 1 34799999
Q ss_pred HHHHHHHHhcCCC--CCCcEEEEeCCc
Q psy4233 219 VAAAIVAACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 219 va~~~~~~~~~~~--~~g~~~~i~~~~ 243 (303)
+|++++.++.+.. ..|+.+.+.++.
T Consensus 228 va~~~~~l~~~~~~~~~g~~~~~~~g~ 254 (256)
T PRK09186 228 ICGTLVFLLSDQSKYITGQNIIVDDGF 254 (256)
T ss_pred hhhhHhheeccccccccCceEEecCCc
Confidence 9999999997542 257777776653
No 115
>PRK06182 short chain dehydrogenase; Validated
Probab=99.85 E-value=8.9e-20 Score=156.47 Aligned_cols=209 Identities=16% Similarity=0.064 Sum_probs=143.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
++++++||||+|+||++++++|+++|++|++++|+.... +.+.. .+++++.+|++|.+++.++++ ++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id 76 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-EDLAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRID 76 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999999999999975432 22111 248899999999999888776 589
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchH----HHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIP----ARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~----~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+|||++|.... +..+..+++|+.++ ..++..+++.+..++|++||....... .....|+.+|.
T Consensus 77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sKa 151 (273)
T PRK06182 77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT-----PLGAWYHATKF 151 (273)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC-----CCccHhHHHHH
Confidence 99999996422 23356778888875 445556666777799999997654321 22357999999
Q ss_pred HHHHHHHh-------hCCCEEEEeecceeeCCCchhh-HH---------HHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233 158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLR-YY---------GHMWRHVFRKLAVYKKGEETIKQPVYVGDVA 220 (303)
Q Consensus 158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 220 (303)
..+.+.+. .++++++++||.+.+|...... .+ ..... .....+...... ..+.+.+|+|
T Consensus 152 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~vA 227 (273)
T PRK06182 152 ALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQ---AVAASMRSTYGS-GRLSDPSVIA 227 (273)
T ss_pred HHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHH---HHHHHHHHhhcc-ccCCCHHHHH
Confidence 99987543 3799999999999887432110 00 00000 000000000111 3568999999
Q ss_pred HHHHHHhcCCCCCCcEEEEe
Q psy4233 221 AAIVAACKDPDAAGKIYQAV 240 (303)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~i~ 240 (303)
++++.++..+.. ...|.++
T Consensus 228 ~~i~~~~~~~~~-~~~~~~g 246 (273)
T PRK06182 228 DAISKAVTARRP-KTRYAVG 246 (273)
T ss_pred HHHHHHHhCCCC-CceeecC
Confidence 999999985433 3356553
No 116
>PRK05717 oxidoreductase; Validated
Probab=99.85 E-value=8.2e-20 Score=155.12 Aligned_cols=217 Identities=12% Similarity=0.038 Sum_probs=151.4
Q ss_pred CCcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233 11 GGRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---- 86 (303)
Q Consensus 11 ~~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 86 (303)
.+..+.++++++||||+|+||++++++|+++|++|++++|+.....+..+.. ..++.++.+|++|.+++.++++
T Consensus 3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL--GENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3455677889999999999999999999999999999988643322211111 1358899999999988765443
Q ss_pred ---ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233 87 ---YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGS 150 (303)
Q Consensus 87 ---~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~ 150 (303)
.+|+|||+||.... ..++..+++|+.++.++++++.. ....++|++||...+... ....
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~-----~~~~ 155 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE-----PDTE 155 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC-----CCCc
Confidence 37999999996422 12346889999999999999863 223589999988765421 2346
Q ss_pred chhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 151 QFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 151 ~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
.|+.+|...+.+++.. ++++..++||++.++....... ..+........+ . ..+.+.+|+|.+++
T Consensus 156 ~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~-------~-~~~~~~~~va~~~~ 226 (255)
T PRK05717 156 AYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA-EPLSEADHAQHP-------A-GRVGTVEDVAAMVA 226 (255)
T ss_pred chHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc-hHHHHHHhhcCC-------C-CCCcCHHHHHHHHH
Confidence 8999999999888763 4788899999999874321100 001000011111 1 24689999999999
Q ss_pred HHhcCC--CCCCcEEEEeCCc
Q psy4233 225 AACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 225 ~~~~~~--~~~g~~~~i~~~~ 243 (303)
.++... ...|+.+.+.++.
T Consensus 227 ~l~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 227 WLLSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred HHcCchhcCccCcEEEECCCc
Confidence 998643 2357788886654
No 117
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.4e-19 Score=153.99 Aligned_cols=215 Identities=12% Similarity=0.041 Sum_probs=151.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-h-cCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-L-CGDLGQVLFQPYHPRNDDEIRKAIKY------- 87 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~~------- 87 (303)
++|+++||||+|+||.+++++|+++|++|+++.++..+..+... . .....+++++.+|++|.+++.+++++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999999888775433222111 1 11124588999999999988877653
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||+||.... ...+..+++|+.++.++++++... +-.++|+++|...+.. ......|+.+
T Consensus 88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~-----~p~~~~Y~~s 162 (258)
T PRK09134 88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL-----NPDFLSYTLS 162 (258)
T ss_pred CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC-----CCCchHHHHH
Confidence 7999999986322 223467889999999999987653 2348888887655432 1123579999
Q ss_pred HHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 156 KYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 156 K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
|..+|.+.+.. .+.++.++||.+..+.......+.. .....+. ....+++|+|++++.+++.
T Consensus 163 K~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~----~~~~~~~--------~~~~~~~d~a~~~~~~~~~ 230 (258)
T PRK09134 163 KAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFAR----QHAATPL--------GRGSTPEEIAAAVRYLLDA 230 (258)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHH----HHhcCCC--------CCCcCHHHHHHHHHHHhcC
Confidence 99999877764 3788889999887543221111111 1111111 2247899999999999987
Q ss_pred CCCCCcEEEEeCCcccCHH
Q psy4233 230 PDAAGKIYQAVGPKRYLLS 248 (303)
Q Consensus 230 ~~~~g~~~~i~~~~~~s~~ 248 (303)
+...|+.|.+.++..++|.
T Consensus 231 ~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 231 PSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred CCcCCCEEEECCCeecccc
Confidence 7667889999888766554
No 118
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.85 E-value=5.1e-20 Score=156.57 Aligned_cols=220 Identities=14% Similarity=0.072 Sum_probs=151.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++|+||||+|+||++++++|+++|++|++++|+.....+..... ....+++++.+|++|.+++..+++ +
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999999999754322211111 112458899999999988876664 4
Q ss_pred cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ......+++|+.++..+++++... ...++|++||...... ..+...|+.+
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----~~~~~~Y~~s 157 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-----QPKYGAYKMA 157 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-----CCCcchhHHH
Confidence 7999999986321 233467889999999999998652 1248999999876542 2345789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhh----hcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHV----FRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|...+.+++.. +++++.++||.+++|.... .+....... ............. ..+.+++|+|++++
T Consensus 158 K~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a~~ 234 (258)
T PRK07890 158 KGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG--YFRHQAGKYGVTVEQIYAETAANSDL-KRLPTDDEVASAVL 234 (258)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH--HhhhcccccCCCHHHHHHHHhhcCCc-cccCCHHHHHHHHH
Confidence 99999888764 6899999999999985321 111000000 0000000000111 34688999999999
Q ss_pred HHhcCC--CCCCcEEEEeCCc
Q psy4233 225 AACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 225 ~~~~~~--~~~g~~~~i~~~~ 243 (303)
.+++.. ...|+.+.+.++.
T Consensus 235 ~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 235 FLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred HHcCHhhhCccCcEEEeCCcc
Confidence 998742 3357777666654
No 119
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.85 E-value=1.2e-19 Score=153.48 Aligned_cols=213 Identities=15% Similarity=0.093 Sum_probs=149.7
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
++++++++||||+|+||.+++++|+++|++|+++.|+..... +.+.. ...+++++.+|++|.+++.++++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA--LGRRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh--cCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356889999999999999999999999999999998643211 11111 12458899999999998886654
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|++||++|.... ...+..+++|+.++.++++++.. .+ ..++|++||...+... .....|+
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y~ 154 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-----IRVPSYT 154 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC-----CCCchhH
Confidence 48999999986432 23345688999999999988753 23 3589999998777532 2345799
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|...+.+.+.. +++++.++||.+..+.......-........+..+ . ..+++.+|+|++++.+
T Consensus 155 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~l 226 (248)
T TIGR01832 155 ASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIP-------A-GRWGTPDDIGGPAVFL 226 (248)
T ss_pred HHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCC-------C-CCCcCHHHHHHHHHHH
Confidence 9999999887764 68999999999987643211000000000111121 1 3579999999999999
Q ss_pred hcCCC--CCCcEEEEeCC
Q psy4233 227 CKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 227 ~~~~~--~~g~~~~i~~~ 242 (303)
+.... ..|+++.+.++
T Consensus 227 ~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 227 ASSASDYVNGYTLAVDGG 244 (248)
T ss_pred cCccccCcCCcEEEeCCC
Confidence 97533 25766666554
No 120
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.4e-19 Score=153.52 Aligned_cols=213 Identities=14% Similarity=0.083 Sum_probs=151.6
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY------ 87 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 87 (303)
+++++++++||||+|.||++++++|+++|++|++++|+.... . ...+++++++|+.|.+++.++++.
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET-----V--DGRPAEFHAADVRDPDQVAALVDAIVERHG 74 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh-----h--cCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 346678999999999999999999999999999999975431 0 123588999999999988877653
Q ss_pred -cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh-----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 88 -SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE-----MGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 88 -~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
+|+|||++|.... ...+..+++|+.++..+++++.. .+..++|++||...+.. ......|+
T Consensus 75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----~~~~~~Y~ 149 (252)
T PRK07856 75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP-----SPGTAAYG 149 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC-----CCCCchhH
Confidence 5999999985321 12346788999999999998754 23358999999877542 23457899
Q ss_pred HHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 154 RTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 154 ~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
.+|...+.+++.. .+.+..++||.+..+.......-...........|. ..+...+|+|++++.++
T Consensus 150 ~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~p~~va~~~~~L~ 221 (252)
T PRK07856 150 AAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL--------GRLATPADIAWACLFLA 221 (252)
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC--------CCCcCHHHHHHHHHHHc
Confidence 9999999988764 267788899988766321100000000001111221 23578999999999999
Q ss_pred cCC--CCCCcEEEEeCCcccC
Q psy4233 228 KDP--DAAGKIYQAVGPKRYL 246 (303)
Q Consensus 228 ~~~--~~~g~~~~i~~~~~~s 246 (303)
... ...|+.+.+.++...+
T Consensus 222 ~~~~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 222 SDLASYVSGANLEVHGGGERP 242 (252)
T ss_pred CcccCCccCCEEEECCCcchH
Confidence 753 2378888888776544
No 121
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=1.3e-19 Score=153.53 Aligned_cols=213 Identities=9% Similarity=0.046 Sum_probs=149.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------- 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------- 87 (303)
+++++++||||+|+||+++++.|+++|++|++..++.....+.+.... ..++.++++|+.|++++.+++++
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 456799999999999999999999999999887664333222211111 14688999999999988877653
Q ss_pred cCEEEEccccCcc--------------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCC
Q psy4233 88 SNVVINLIGREFA--------------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGG 149 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~ 149 (303)
+|++||+++.... +.....+++|+.++.++++++. ..+..++|++||..... +..+.
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----~~~~~ 156 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-----PVVPY 156 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----CCCCc
Confidence 8999999975210 1123568899999999999885 34456999999865432 23456
Q ss_pred CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
+.|+.+|...+.+++.. ++.+..++||.+..+...... ............|+ ..+.+.+|+|++
T Consensus 157 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~va~~ 227 (253)
T PRK08642 157 HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLIAATTPL--------RKVTTPQEFADA 227 (253)
T ss_pred cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHHHhcCCc--------CCCCCHHHHHHH
Confidence 78999999999998874 578888999988765221100 01111111122222 347899999999
Q ss_pred HHHHhcCC--CCCCcEEEEeCCc
Q psy4233 223 IVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 223 ~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
++.++... ...|+.+.+.++.
T Consensus 228 ~~~l~~~~~~~~~G~~~~vdgg~ 250 (253)
T PRK08642 228 VLFFASPWARAVTGQNLVVDGGL 250 (253)
T ss_pred HHHHcCchhcCccCCEEEeCCCe
Confidence 99999743 3478888887764
No 122
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.85 E-value=5e-20 Score=155.82 Aligned_cols=213 Identities=12% Similarity=0.040 Sum_probs=151.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+.+++++||||+|.||++++++|+++|++|++++|+..+...... ......+++++.+|+.|.+++.++++ +
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999887543222111 11112458999999999998887764 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ......++.|+.++.++++++... +..++|++||...+... .....|+.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~y~~s 159 (250)
T PRK12939 85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA-----PKLGAYVAS 159 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC-----CCcchHHHH
Confidence 8999999996432 122345778999999998887543 33499999997765421 234679999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh--HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR--YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
|...+.+++.. ++.++.++||.+..+...... ....... .. ... ..+++.+|+|++++.+
T Consensus 160 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~---~~-------~~~-~~~~~~~dva~~~~~l 228 (250)
T PRK12939 160 KGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYL---KG-------RAL-ERLQVPDDVAGAVLFL 228 (250)
T ss_pred HHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHH---hc-------CCC-CCCCCHHHHHHHHHHH
Confidence 99999988753 588999999998776432211 1111110 11 122 4579999999999999
Q ss_pred hcCC--CCCCcEEEEeCCcc
Q psy4233 227 CKDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~~~~ 244 (303)
+... ...|+.+++.++..
T Consensus 229 ~~~~~~~~~G~~i~~~gg~~ 248 (250)
T PRK12939 229 LSDAARFVTGQLLPVNGGFV 248 (250)
T ss_pred hCccccCccCcEEEECCCcc
Confidence 9753 23788899887653
No 123
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.84 E-value=9.4e-20 Score=155.01 Aligned_cols=217 Identities=13% Similarity=0.069 Sum_probs=151.5
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
.++++++++||||+|.||++++++|+++|++|++++|+.... +.... .....+++++.+|+++++++..+++
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 346678999999999999999999999999999999976433 21111 1112458899999999998887775
Q ss_pred -ccCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 87 -YSNVVINLIGREFA-------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 87 -~~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
++|+|||++|.... +..+..+++|+.++.++.+++.. .+..+||++||...... ......|+.+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~Y~~s 156 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-----QGGTSGYAAA 156 (258)
T ss_pred CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC-----CCCCchhHHH
Confidence 47999999995321 22345678889888888887643 22358999999877642 1345789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHH---HHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYG---HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|...+.+++.. +++++.++||.+++|.... ...+. .......+..+. . ..++..+|+|++++
T Consensus 157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~dva~~~~ 229 (258)
T PRK08628 157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPL------G-HRMTTAEEIADTAV 229 (258)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCc------c-ccCCCHHHHHHHHH
Confidence 99999988763 6899999999999874221 00000 000000111111 0 24688999999999
Q ss_pred HHhcCC--CCCCcEEEEeCCc
Q psy4233 225 AACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 225 ~~~~~~--~~~g~~~~i~~~~ 243 (303)
.++... ...|+.+.+.++.
T Consensus 230 ~l~~~~~~~~~g~~~~~~gg~ 250 (258)
T PRK08628 230 FLLSERSSHTTGQWLFVDGGY 250 (258)
T ss_pred HHhChhhccccCceEEecCCc
Confidence 999753 3457778776553
No 124
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.84 E-value=3.2e-19 Score=151.94 Aligned_cols=211 Identities=14% Similarity=0.106 Sum_probs=149.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++++||||+|.||++++++|+++|++|++++|+..... ..++.++.+|+.|.+++.++++ .+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 78 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL--------PEGVEFVAADLTTAEGCAAVARAVLERLGGV 78 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc--------CCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 55789999999999999999999999999999999754321 1358899999999988775543 47
Q ss_pred CEEEEccccCc----------cccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 89 NVVINLIGREF----------ATKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 89 D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
|+|||+||... .+.....+++|+.++.++.+++ ++.+..++|++||...+... ......|+.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----~~~~~~Y~~ 154 (260)
T PRK06523 79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----PESTTAYAA 154 (260)
T ss_pred CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----CCCcchhHH
Confidence 99999998521 1234467888999887776654 44455689999998775421 124578999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHH--------HHHHh---hhcceeeecCCCceeeCcee
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYG--------HMWRH---VFRKLAVYKKGEETIKQPVY 215 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~--------~~~~~---~~~~~~~~~~~~~~~~~~i~ 215 (303)
+|...+.+++.. ++++.+++||.+.+|.... ...+. ..... ....+|+ ..+..
T Consensus 155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~~~~~ 226 (260)
T PRK06523 155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL--------GRPAE 226 (260)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc--------CCCCC
Confidence 999999877663 6899999999999875321 11000 00000 0011121 23578
Q ss_pred HHHHHHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233 216 VGDVAAAIVAACKDP--DAAGKIYQAVGPKRYL 246 (303)
Q Consensus 216 ~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s 246 (303)
.+|+|+++++++..+ ...|+.+.+.++...|
T Consensus 227 ~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 227 PEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 899999999999753 3468889998876544
No 125
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.84 E-value=4.5e-19 Score=153.33 Aligned_cols=216 Identities=12% Similarity=0.106 Sum_probs=153.6
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
..+++++++||||+|+||.+++++|+++|++|+++.|+.....+... ......++.++.+|+.|.+.+.++++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999887533222111 11112458899999999998887664
Q ss_pred --ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 --YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 --~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|+|||+||.... +.....+++|+.++.++++++... ...++|++||...+... .....|+
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~-----~~~~~Y~ 196 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN-----ETLIDYS 196 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC-----CCcchhH
Confidence 47999999986322 122457889999999999998653 23589999998887532 2236799
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|...+.+++.. +++++.++||.++.+..... ......... ...... ..+.+.+|+|++++.+
T Consensus 197 ~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~-~~~~~~~~~-------~~~~~~-~~~~~~~dva~~~~~l 267 (290)
T PRK06701 197 ATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD-FDEEKVSQF-------GSNTPM-QRPGQPEELAPAYVFL 267 (290)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc-cCHHHHHHH-------HhcCCc-CCCcCHHHHHHHHHHH
Confidence 9999999877663 68999999999988742210 000111101 111122 4578999999999999
Q ss_pred hcCCC--CCCcEEEEeCCc
Q psy4233 227 CKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 227 ~~~~~--~~g~~~~i~~~~ 243 (303)
+.... ..|..+++.++.
T Consensus 268 l~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 268 ASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred cCcccCCccCcEEEeCCCc
Confidence 97532 368888887764
No 126
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.84 E-value=2.7e-19 Score=149.88 Aligned_cols=204 Identities=15% Similarity=0.082 Sum_probs=145.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------ccCE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------YSNV 90 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D~ 90 (303)
.+++++||||+|+||++++++|+++|++|+++.|+..+.. ..+++.+|+.|.+++.+++. ++|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~ 71 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF----------PGELFACDLADIEQTAATLAQINEIHPVDA 71 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc----------CceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence 4679999999999999999999999999999999764310 13578999999998887665 4799
Q ss_pred EEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 91 VINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
|||++|.... ......+++|+.++.++.+++ ++.+..++|++||...++. .....|+.+|..
T Consensus 72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------~~~~~Y~~sK~a 145 (234)
T PRK07577 72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA------LDRTSYSAAKSA 145 (234)
T ss_pred EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC------CCchHHHHHHHH
Confidence 9999996432 223356778888877776655 4456679999999876653 234789999999
Q ss_pred HHHHHHh-------hCCCEEEEeecceeeCCCchhhH-HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 159 GEKEVLR-------EFPEATIFRPSDMYGSGDKFLRY-YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 159 ~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
.+.+++. .++.+++++||.+..+....... ............+. ..+...+|+|.+++.++..+
T Consensus 146 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~l~~~~ 217 (234)
T PRK07577 146 LVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM--------RRLGTPEEVAAAIAFLLSDD 217 (234)
T ss_pred HHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC--------CCCcCHHHHHHHHHHHhCcc
Confidence 9887765 27999999999998764221100 00000000011111 12467899999999999754
Q ss_pred C--CCCcEEEEeCCcc
Q psy4233 231 D--AAGKIYQAVGPKR 244 (303)
Q Consensus 231 ~--~~g~~~~i~~~~~ 244 (303)
. ..|+.+.+.++..
T Consensus 218 ~~~~~g~~~~~~g~~~ 233 (234)
T PRK07577 218 AGFITGQVLGVDGGGS 233 (234)
T ss_pred cCCccceEEEecCCcc
Confidence 2 3578888876643
No 127
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.9e-19 Score=153.62 Aligned_cols=217 Identities=14% Similarity=0.074 Sum_probs=150.5
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+.+++++++||||+|+||.++++.|+++|++|++++|+.....+... ......+++++.+|+++.+++.++++
T Consensus 6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34678899999999999999999999999999999997543221111 11112458889999999998877654
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh-----cCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE-----MGVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
++|+|||+||.... ......+++|+.++.++.+++.. .+..++|++||...... ..+...|
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~Y 160 (263)
T PRK07814 86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA-----GRGFAAY 160 (263)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC-----CCCCchh
Confidence 57999999985321 23456789999999999999864 34568999999765431 2445789
Q ss_pred hHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 153 ~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
+.+|..++.+++.. .+.++.++||.+..+.......-..+........+. ......+|+|++++.+
T Consensus 161 ~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l 232 (263)
T PRK07814 161 GTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPL--------RRLGDPEDIAAAAVYL 232 (263)
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence 99999999988874 367888899888655321110000110001111111 2357889999999999
Q ss_pred hcCC--CCCCcEEEEeCCc
Q psy4233 227 CKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~~~ 243 (303)
+... ...|+.+.+.++.
T Consensus 233 ~~~~~~~~~g~~~~~~~~~ 251 (263)
T PRK07814 233 ASPAGSYLTGKTLEVDGGL 251 (263)
T ss_pred cCccccCcCCCEEEECCCc
Confidence 9752 2367777776654
No 128
>PRK08324 short chain dehydrogenase; Validated
Probab=99.84 E-value=1e-19 Score=174.24 Aligned_cols=224 Identities=18% Similarity=0.117 Sum_probs=157.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+.+++++||||+|+||+++++.|+++|++|++++|+...............++.++.+|++|.+++.++++ ++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i 499 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV 499 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999999754322211111111368899999999998887665 58
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCC-ceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGV-EKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
|+|||++|.... ......+++|+.++.++++++. +.+. .+||++||....... .....|+.+
T Consensus 500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~-----~~~~~Y~as 574 (681)
T PRK08324 500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG-----PNFGAYGAA 574 (681)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----CCcHHHHHH
Confidence 999999996322 2334678899999999977664 4443 689999998765421 234789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeeccee-eCCCchhhHHHHHHHhhhcc----eeeecCCCceeeCceeHHHHHHHH
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMY-GSGDKFLRYYGHMWRHVFRK----LAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
|...+.+++.+ ++++++++|+.+| +++.....+........+.. ...++.+... ..+++.+|+|+++
T Consensus 575 Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-~~~v~~~DvA~a~ 653 (681)
T PRK08324 575 KAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLL-KREVTPEDVAEAV 653 (681)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCc-CCccCHHHHHHHH
Confidence 99999988764 5899999999998 54321111110000000000 0123333344 6789999999999
Q ss_pred HHHhc--CCCCCCcEEEEeCCccc
Q psy4233 224 VAACK--DPDAAGKIYQAVGPKRY 245 (303)
Q Consensus 224 ~~~~~--~~~~~g~~~~i~~~~~~ 245 (303)
+.++. .....|+++++.+|...
T Consensus 654 ~~l~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 654 VFLASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred HHHhCccccCCcCCEEEECCCchh
Confidence 99984 34456889999888654
No 129
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.84 E-value=2.5e-19 Score=152.49 Aligned_cols=217 Identities=13% Similarity=0.106 Sum_probs=150.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++++||||+|+||.++++.|+++|++|++++|+..+....... .....+++++.+|++|++++.+++. .
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999975432211111 1112357889999999998866553 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc-----CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM-----GVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|+|||++|.... ......+++|+.++.++++++... +..++|++||...+...... ..+..+|+.
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-~~~~~~Y~~ 168 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-VMDTIAYNT 168 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-ccCcchHHH
Confidence 7999999986321 122356789999999999987654 56799999998665432111 123478999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
+|+.++.+++.+ ++++.+++|+.+-.+... ..+....+......++ .-+...+|+|++++.++
T Consensus 169 sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~ 238 (259)
T PRK08213 169 SKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR--GTLERLGEDLLAHTPL--------GRLGDDEDLKGAALLLA 238 (259)
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh--hhhHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHh
Confidence 999999988764 588999999888765322 1122222111111111 23567899999999988
Q ss_pred cCC--CCCCcEEEEeCCc
Q psy4233 228 KDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 228 ~~~--~~~g~~~~i~~~~ 243 (303)
... ...|+.+++.++.
T Consensus 239 ~~~~~~~~G~~~~~~~~~ 256 (259)
T PRK08213 239 SDASKHITGQILAVDGGV 256 (259)
T ss_pred CccccCccCCEEEECCCe
Confidence 643 2368888887653
No 130
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.84 E-value=9.7e-20 Score=155.98 Aligned_cols=207 Identities=20% Similarity=0.120 Sum_probs=144.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------cC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------SN 89 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D 89 (303)
++++|+||||+|+||++++++|+++|++|++++|+..+... ..+++++++|++|++++.+++++ +|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d 75 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------IPGVELLELDVTDDASVQAAVDEVIARAGRID 75 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence 45689999999999999999999999999999997543221 14588999999999999887764 69
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+|||++|.... ......+++|+.++.++++++ ++.+.++||++||...+.. ......|+.+|.
T Consensus 76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~sK~ 150 (270)
T PRK06179 76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP-----APYMALYAASKH 150 (270)
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC-----CCCccHHHHHHH
Confidence 99999996322 123567889999988888874 5667789999999876642 123468999999
Q ss_pred HHHHHHHh-------hCCCEEEEeecceeeCCCchhh----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLR----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
..+.+++. .++++++++||.+.++...... .+............... ... ......+|+|+.++.+
T Consensus 151 a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~va~~~~~~ 227 (270)
T PRK06179 151 AVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVA--KAV-KKADAPEVVADTVVKA 227 (270)
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHH--hcc-ccCCCHHHHHHHHHHH
Confidence 99987665 3899999999999876432110 00000000000000000 001 2346789999999999
Q ss_pred hcCCCCCCcEEEE
Q psy4233 227 CKDPDAAGKIYQA 239 (303)
Q Consensus 227 ~~~~~~~g~~~~i 239 (303)
+..+.. +..|..
T Consensus 228 ~~~~~~-~~~~~~ 239 (270)
T PRK06179 228 ALGPWP-KMRYTA 239 (270)
T ss_pred HcCCCC-CeeEec
Confidence 986443 335543
No 131
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.84 E-value=2.4e-19 Score=152.13 Aligned_cols=216 Identities=14% Similarity=0.057 Sum_probs=151.6
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
++.+++++||||+|.||.+++++|+++|++|++++|+.....+...... ...++.++.+|++|++++.+++.
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG 85 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 4567899999999999999999999999999999987543222111111 12357889999999998887664
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
.+|+|||++|.... ...+..+++|+.++..+++++.. .+..+||++||...... ......|+.
T Consensus 86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~ 160 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG-----RDTITPYAA 160 (254)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC-----CCCCcchHH
Confidence 37999999986321 23345788999998888887654 34568999999865421 134578999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
+|...+.+++.. ++++..++||++..+...................|+ ..+...+|+|++++.++
T Consensus 161 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~~va~~~~~l~ 232 (254)
T PRK08085 161 SKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA--------ARWGDPQELIGAAVFLS 232 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHh
Confidence 999999988774 689999999999887432110001111101112221 34688999999999999
Q ss_pred cCC--CCCCcEEEEeCCc
Q psy4233 228 KDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 228 ~~~--~~~g~~~~i~~~~ 243 (303)
... ...|++..+.++.
T Consensus 233 ~~~~~~i~G~~i~~dgg~ 250 (254)
T PRK08085 233 SKASDFVNGHLLFVDGGM 250 (254)
T ss_pred CccccCCcCCEEEECCCe
Confidence 743 3367788777664
No 132
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.84 E-value=4.6e-19 Score=148.80 Aligned_cols=205 Identities=17% Similarity=0.129 Sum_probs=145.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++|+||||+|+||++++++|+++|++|++++|++..............+++++.+|+.|.+++.+.++ ++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45679999999999999999999999999999999754322211111111468899999999998887665 58
Q ss_pred CEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 89 NVVINLIGREFAT--------KNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 89 D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
|+|||+++..... .....+++|+.++..+++++.. .+.+++|++||...... ......|..+|+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~y~~sk~ 158 (237)
T PRK07326 84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-----FAGGAAYNASKF 158 (237)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-----CCCCchHHHHHH
Confidence 9999999863221 1235688899999998888754 24468999999876532 234567999999
Q ss_pred HHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
..+.+.+. .+++++++||+.+.++..... .. ... ...+..+|++++++.++..+
T Consensus 159 a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~---------~~---------~~~-~~~~~~~d~a~~~~~~l~~~ 219 (237)
T PRK07326 159 GLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT---------PS---------EKD-AWKIQPEDIAQLVLDLLKMP 219 (237)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc---------cc---------hhh-hccCCHHHHHHHHHHHHhCC
Confidence 88776665 378999999999876532110 00 000 12378999999999999875
Q ss_pred CC-CCcEEEEeCCcc
Q psy4233 231 DA-AGKIYQAVGPKR 244 (303)
Q Consensus 231 ~~-~g~~~~i~~~~~ 244 (303)
.. ......+..+++
T Consensus 220 ~~~~~~~~~~~~~~~ 234 (237)
T PRK07326 220 PRTLPSKIEVRPSRP 234 (237)
T ss_pred ccccccceEEecCCC
Confidence 43 334555554443
No 133
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.84 E-value=1.5e-19 Score=152.81 Aligned_cols=197 Identities=19% Similarity=0.152 Sum_probs=136.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCEE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNVV 91 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v 91 (303)
|+|+||||+|+||.++++.|+++|++|++++|+........... ..+++++.+|+.|.+++.++++ ++|.|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL--GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 68999999999999999999999999999999754322211111 1358899999999988877664 58999
Q ss_pred EEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 92 INLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 92 i~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
||++|.... ......+++|+.++..+++++ ++.+..++|++||..... +......|+.+|..
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----~~~~~~~Y~~sK~~ 153 (248)
T PRK10538 79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----PYAGGNVYGATKAF 153 (248)
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----CCCCCchhHHHHHH
Confidence 999986321 122456788888865555554 556667999999987653 22345789999999
Q ss_pred HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233 159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD 231 (303)
Q Consensus 159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 231 (303)
.+.+.+.. ++.+.+++||.+.|+........... . .... .+ .. ..++..+|+|++++.++..+.
T Consensus 154 ~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~-~-~~~~--~~----~~-~~~~~~~dvA~~~~~l~~~~~ 224 (248)
T PRK10538 154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-G-KAEK--TY----QN-TVALTPEDVSEAVWWVATLPA 224 (248)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcH-H-HHHh--hc----cc-cCCCCHHHHHHHHHHHhcCCC
Confidence 99887663 58899999999986532110000000 0 0000 00 01 245799999999999997543
No 134
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.84 E-value=5.2e-19 Score=150.14 Aligned_cols=214 Identities=13% Similarity=0.087 Sum_probs=151.1
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
++.+++++||||+|+||.+++++|+++|++|++++|+.... +..... ...++..+.+|+.|.+++..++. +
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL-LGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh-hCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 34578999999999999999999999999999999975321 111111 12347789999999998877664 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ......+++|+.++.++++++.. .+..++|++||...... ......|+.+
T Consensus 90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~s 164 (255)
T PRK06841 90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA-----LERHVAYCAS 164 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC-----CCCCchHHHH
Confidence 7999999996422 12235788999999999998764 35569999999865431 1234689999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+.+.. ++.+..++||.+..+....... ..........++ . ..+.+.+|+|++++.++.
T Consensus 165 K~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~-------~-~~~~~~~~va~~~~~l~~ 235 (255)
T PRK06841 165 KAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-GEKGERAKKLIP-------A-GRFAYPEEIAAAALFLAS 235 (255)
T ss_pred HHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-hhHHHHHHhcCC-------C-CCCcCHHHHHHHHHHHcC
Confidence 99998877653 6889999999998764221000 000000111222 1 357899999999999997
Q ss_pred CCC--CCCcEEEEeCCcc
Q psy4233 229 DPD--AAGKIYQAVGPKR 244 (303)
Q Consensus 229 ~~~--~~g~~~~i~~~~~ 244 (303)
.+. ..|+.+.+.++..
T Consensus 236 ~~~~~~~G~~i~~dgg~~ 253 (255)
T PRK06841 236 DAAAMITGENLVIDGGYT 253 (255)
T ss_pred ccccCccCCEEEECCCcc
Confidence 542 3688888877653
No 135
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.83 E-value=3.4e-19 Score=151.98 Aligned_cols=198 Identities=16% Similarity=0.096 Sum_probs=141.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
+++|+||||+|+||+++++.|+++|++|++++|+..+...... +.....++.++.+|+.|.+.+..+++ ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999997543221111 11112468889999999998887765 579
Q ss_pred EEEEccccCccc---------cchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFAT---------KNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+|||++|..... .....+++|+.++.++++.+.. .+..++|++||...+.. ..+...|+.+|.
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~ 155 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG-----VPTRSGYAASKH 155 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC-----CCCccHHHHHHH
Confidence 999999863221 1234588999999999998853 23468999999887652 234578999999
Q ss_pred HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
..+.+.+.. +++++.++||.+..+..... . .....+....+.+. ..+++++|+|++++.++..
T Consensus 156 ~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~--~------~~~~~~~~~~~~~~-~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 156 ALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA--L------DGDGKPLGKSPMQE-SKIMSAEECAEAILPAIAR 225 (263)
T ss_pred HHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh--c------cccccccccccccc-cCCCCHHHHHHHHHHHhhC
Confidence 999887652 68999999999986633210 0 00011111112222 3689999999999999975
No 136
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.83 E-value=4.7e-19 Score=149.37 Aligned_cols=213 Identities=15% Similarity=0.110 Sum_probs=149.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-h-cCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-L-CGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++||||+|+||+++++.|+++|++|+++.|+.....+... . .....++.++.+|+.|.+++.++++ .+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999997532211111 1 1112458999999999998877664 37
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
|++||++|.... +..+..+++|+.++.++.++ +++.+..++|++||...+... .....|..+|
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----~~~~~Y~~sK 156 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ-----FGQTNYSAAK 156 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC-----CCChHHHHHH
Confidence 999999986322 22345778899998887554 455666799999998776421 2346799999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
...+.+++.. ++++++++|+.+.++....... ..........+ . ..+...+|+++++..++..
T Consensus 157 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--~~~~~~~~~~~-------~-~~~~~~~~va~~~~~l~~~ 226 (245)
T PRK12824 157 AGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP--EVLQSIVNQIP-------M-KRLGTPEEIAAAVAFLVSE 226 (245)
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH--HHHHHHHhcCC-------C-CCCCCHHHHHHHHHHHcCc
Confidence 9888777653 6899999999998774321111 11110111111 1 3467889999999998864
Q ss_pred C--CCCCcEEEEeCCccc
Q psy4233 230 P--DAAGKIYQAVGPKRY 245 (303)
Q Consensus 230 ~--~~~g~~~~i~~~~~~ 245 (303)
. ...|+.+++.++..+
T Consensus 227 ~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK12824 227 AAGFITGETISINGGLYM 244 (245)
T ss_pred cccCccCcEEEECCCeec
Confidence 3 236889999888643
No 137
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.83 E-value=6.4e-19 Score=148.64 Aligned_cols=214 Identities=14% Similarity=0.084 Sum_probs=148.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
..++++++||||+|+||++++++|+++|++|+++.|+......... ......++.++.+|++|.+++.++++
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3467899999999999999999999999999888776443222111 11112468899999999998888776
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
++|+|||++|.... ...+..+++|+.++.++++++... ...++|++||...... ..+...|+.+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~Y~~s 156 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP-----LPGYGPYAAS 156 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC-----CCCCchhHHH
Confidence 48999999996421 123356789999999999888653 2248999998766532 2345789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+++.. ++.++.++||.+..+..... ..........+..++ ..+.+.+|+|++++.++.
T Consensus 157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~d~a~~~~~l~~ 227 (245)
T PRK12937 157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG-KSAEQIDQLAGLAPL--------ERLGTPEEIAAAVAFLAG 227 (245)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc-CCHHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHcC
Confidence 99999888763 58889999998876531100 001111111111221 235688999999999997
Q ss_pred CCC--CCCcEEEEeCC
Q psy4233 229 DPD--AAGKIYQAVGP 242 (303)
Q Consensus 229 ~~~--~~g~~~~i~~~ 242 (303)
.+. ..|+.+++.++
T Consensus 228 ~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 228 PDGAWVNGQVLRVNGG 243 (245)
T ss_pred ccccCccccEEEeCCC
Confidence 532 35778888654
No 138
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.83 E-value=7.2e-19 Score=149.22 Aligned_cols=218 Identities=14% Similarity=0.048 Sum_probs=148.9
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
|++++++++||||+|.||.+++++|+++|++|++++|+..+..+..... ....++.++.+|+.|++++.++++
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 3456789999999999999999999999999999999754322211111 112458889999999998887765
Q ss_pred -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
.+|++||+||.... +..+..+++|+.++..+++++ ++.+..++|++||...+.. +......|
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~----~~~~~~~Y 157 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA----GFPGMAAY 157 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc----CCCCcchh
Confidence 47999999986321 123467889998777665544 4455568999999876531 11345789
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+.+|...+.+.+.. ++.+..++||.+-.+...................+ . ..+...+|+|+++++
T Consensus 158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va~~~~~ 229 (254)
T PRK07478 158 AASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA-------L-KRMAQPEEIAQAALF 229 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC-------C-CCCcCHHHHHHHHHH
Confidence 99999999887763 58899999999976632111000000000001111 1 235789999999999
Q ss_pred HhcCCC--CCCcEEEEeCCc
Q psy4233 226 ACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 226 ~~~~~~--~~g~~~~i~~~~ 243 (303)
++.++. ..|+++.+.++.
T Consensus 230 l~s~~~~~~~G~~~~~dgg~ 249 (254)
T PRK07478 230 LASDAASFVTGTALLVDGGV 249 (254)
T ss_pred HcCchhcCCCCCeEEeCCch
Confidence 997532 367888886654
No 139
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.83 E-value=5.7e-19 Score=150.19 Aligned_cols=214 Identities=17% Similarity=0.135 Sum_probs=149.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++++||||+|.||.+++++|+++|++|+++.|+ .+..+..... ....+++++.+|++|.+++..+++ .
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999887 2211111111 112458899999999998887765 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|++||++|.... ...+..+++|+.++..+.+++. +.+..++|++||...+... .....|+.+
T Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~as 166 (258)
T PRK06935 92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG-----KFVPAYTAS 166 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC-----CCchhhHHH
Confidence 7999999986321 1334578889999877776654 4455699999998876421 234589999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+++.. +++++.++||.+..+..................++. ..+...+|+|.++++++.
T Consensus 167 K~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~s 238 (258)
T PRK06935 167 KHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPA--------GRWGEPDDLMGAAVFLAS 238 (258)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHcC
Confidence 99999988763 689999999998876422111000000001111221 246888999999999987
Q ss_pred CC--CCCCcEEEEeCCc
Q psy4233 229 DP--DAAGKIYQAVGPK 243 (303)
Q Consensus 229 ~~--~~~g~~~~i~~~~ 243 (303)
.. ...|+++.+.++.
T Consensus 239 ~~~~~~~G~~i~~dgg~ 255 (258)
T PRK06935 239 RASDYVNGHILAVDGGW 255 (258)
T ss_pred hhhcCCCCCEEEECCCe
Confidence 43 2368888887764
No 140
>KOG1221|consensus
Probab=99.83 E-value=3.7e-19 Score=157.86 Aligned_cols=244 Identities=18% Similarity=0.162 Sum_probs=173.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCcccccchhc----------------CCCCceEEEecCCC
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRDLRLC----------------GDLGQVLFQPYHPR 76 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~----------------~~~~~~~~~~~Dl~ 76 (303)
..+++|+|||||||+|.-++..|++.- .+++++.|.........+.. ..+.++..+.||+.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 468899999999999999999999863 57899999765443221111 12367899999997
Q ss_pred CH------HHHHHHhcccCEEEEccccCcc-ccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCC--------
Q psy4233 77 ND------DEIRKAIKYSNVVINLIGREFA-TKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPN-------- 140 (303)
Q Consensus 77 d~------~~~~~~~~~~D~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~-------- 140 (303)
++ +++....+++|+|||+|+...+ +.-.....+|..|++++++.|++.. .+-+|++||..+...
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~ 169 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKP 169 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccc
Confidence 63 5566677789999999997544 4445688899999999999999975 789999999887421
Q ss_pred ---CCCCC------------------------CCCCCchhHHHHHHHHHHHhh--CCCEEEEeecceeeCCCc-hhhHHH
Q psy4233 141 ---PPTYY------------------------ISGGSQFYRTKYQGEKEVLRE--FPEATIFRPSDMYGSGDK-FLRYYG 190 (303)
Q Consensus 141 ---~~~~~------------------------~~~~~~y~~~K~~~e~~~~~~--~~~~~ilrp~~~~G~~~~-~~~~~~ 190 (303)
.+..+ ....+.|.-+|+.+|.++.+. ++|.+|+||+.+...... +..++.
T Consensus 170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWid 249 (467)
T KOG1221|consen 170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWID 249 (467)
T ss_pred cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccc
Confidence 11000 012678999999999999886 699999999999984221 111111
Q ss_pred -------HHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC----CC-CCCcEEEEeCCc--ccCHHHHHHHHH
Q psy4233 191 -------HMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD----PD-AAGKIYQAVGPK--RYLLSELLDWFH 255 (303)
Q Consensus 191 -------~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~----~~-~~g~~~~i~~~~--~~s~~e~~~~i~ 255 (303)
-++.. ++..-.+..+.+.. .+.|.+|.++.+++.+... .. ....+||+++++ +++|.++.+...
T Consensus 250 n~~gp~g~i~g~gkGvlr~~~~d~~~~-adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~ 328 (467)
T KOG1221|consen 250 NLNGPDGVIIGYGKGVLRCFLVDPKAV-ADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELAL 328 (467)
T ss_pred cCCCCceEEEEeccceEEEEEEccccc-cceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHH
Confidence 11111 22222333444444 7899999999999876621 11 124599999874 489999999998
Q ss_pred HHhcC
Q psy4233 256 VVMKK 260 (303)
Q Consensus 256 ~~~g~ 260 (303)
+...+
T Consensus 329 ~~~~~ 333 (467)
T KOG1221|consen 329 RYFEK 333 (467)
T ss_pred Hhccc
Confidence 88763
No 141
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.83 E-value=6.2e-19 Score=148.64 Aligned_cols=212 Identities=16% Similarity=0.087 Sum_probs=146.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
++++++++||||+|+||+++++.|+++|+.|++..|+........... ..+++++.+|++|.+++.++++ +
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL--GERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 456789999999999999999999999998888877643322211111 2358899999999988877643 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ......+++|+.++.++++++.. .+..++|++||...+... .....|+.+
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~s 155 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN-----PGQANYCAS 155 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC-----CCCcchHHH
Confidence 8999999996322 23356788999999888887642 355699999997554321 224679999
Q ss_pred HHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+.+. .+++++.++||.+..+........ .........+ . ..+.+.+|+++++..++.
T Consensus 156 k~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~~~-------~-~~~~~~~~ia~~~~~l~~ 225 (245)
T PRK12936 156 KAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDK--QKEAIMGAIP-------M-KRMGTGAEVASAVAYLAS 225 (245)
T ss_pred HHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChH--HHHHHhcCCC-------C-CCCcCHHHHHHHHHHHcC
Confidence 9977766654 268999999998865532211110 0000011111 1 336789999999998886
Q ss_pred CCC--CCCcEEEEeCCc
Q psy4233 229 DPD--AAGKIYQAVGPK 243 (303)
Q Consensus 229 ~~~--~~g~~~~i~~~~ 243 (303)
... ..|+.+++.++.
T Consensus 226 ~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 226 SEAAYVTGQTIHVNGGM 242 (245)
T ss_pred ccccCcCCCEEEECCCc
Confidence 533 268899988764
No 142
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.83 E-value=3.7e-19 Score=150.42 Aligned_cols=211 Identities=16% Similarity=0.105 Sum_probs=143.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++||||+|+||++++++|+++|++|++..++......... ......++.++.+|++|.+++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 4589999999999999999999999988877654332222111 11111357889999999998887765 47
Q ss_pred CEEEEccccCccc---------cchhhhhhhcchHHHHHHHHHhc------C-CceEEEEecCccC-CCCCCCCCCCCCc
Q psy4233 89 NVVINLIGREFAT---------KNFTIADANVEIPARLARLSKEM------G-VEKFIHISALNAD-PNPPTYYISGGSQ 151 (303)
Q Consensus 89 D~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~------~-~~~~v~~Ss~~~~-~~~~~~~~~~~~~ 151 (303)
|+|||++|..... .....+++|+.++.++++++... + -.++|++||.... +.+ .....
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----~~~~~ 156 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP-----GEYID 156 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-----CCccc
Confidence 9999999864221 22356889999999988877542 1 1369999997654 321 11246
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|+.+|...+.+++.. +++++++||+.+++|...... ............|+ .-+.+++|++++++
T Consensus 157 Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~--------~~~~~~~d~a~~~~ 227 (248)
T PRK06123 157 YAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPM--------GRGGTAEEVARAIL 227 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCC--------CCCcCHHHHHHHHH
Confidence 999999999877653 799999999999998432111 11111111111221 12357899999999
Q ss_pred HHhcCCC--CCCcEEEEeCC
Q psy4233 225 AACKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 225 ~~~~~~~--~~g~~~~i~~~ 242 (303)
.++.... ..|+.|++.++
T Consensus 228 ~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 228 WLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHhCccccCccCCEEeecCC
Confidence 9987532 46889998765
No 143
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=3.9e-19 Score=150.58 Aligned_cols=212 Identities=12% Similarity=0.078 Sum_probs=148.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+.+++++||||+|+||+++++.|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++ .
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 55789999999999999999999999999999998754322211111 112458889999999888776554 3
Q ss_pred cCEEEEccccCcc-----------------ccchhhhhhhcchHHHHHHHHH----hc-CCceEEEEecCccCCCCCCCC
Q psy4233 88 SNVVINLIGREFA-----------------TKNFTIADANVEIPARLARLSK----EM-GVEKFIHISALNADPNPPTYY 145 (303)
Q Consensus 88 ~D~vi~~a~~~~~-----------------~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~~Ss~~~~~~~~~~~ 145 (303)
+|+|||++|.... ......+++|+.++..+.+++. +. .-.++|++||...++.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~----- 157 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN----- 157 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC-----
Confidence 6999999985321 1123466788888877665443 22 2247999999877653
Q ss_pred CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233 146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD 218 (303)
Q Consensus 146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 218 (303)
.+...|+.+|...+.+++.. +++++.++|+.+.++..... ............+ . ..+.+.+|
T Consensus 158 -~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~-------~-~~~~~~~~ 226 (253)
T PRK08217 158 -MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIP-------V-GRLGEPEE 226 (253)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CHHHHHHHHhcCC-------c-CCCcCHHH
Confidence 34578999999999877653 68999999999987753211 1111111111112 1 34678999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233 219 VAAAIVAACKDPDAAGKIYQAVGPK 243 (303)
Q Consensus 219 va~~~~~~~~~~~~~g~~~~i~~~~ 243 (303)
+|+++..++......|++|++.++-
T Consensus 227 ~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 227 IAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred HHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 9999999997655578999998764
No 144
>PRK06398 aldose dehydrogenase; Validated
Probab=99.83 E-value=1.4e-18 Score=147.84 Aligned_cols=211 Identities=15% Similarity=0.079 Sum_probs=148.2
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
.+++++++||||+|.||.+++++|+++|++|++++|+.... .+++++.+|++|++++.++++ .
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYGR 72 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35678999999999999999999999999999999975321 248899999999988877664 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||+||.... +.....+++|+.++..+++++.. .+..++|++||...+.. ......|+.+
T Consensus 73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~s 147 (258)
T PRK06398 73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-----TRNAAAYVTS 147 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-----CCCCchhhhh
Confidence 8999999986321 22345689999999988887743 34569999999877642 2445789999
Q ss_pred HHHHHHHHHhh------CCCEEEEeecceeeCCCchhhH-----HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 156 KYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRY-----YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 156 K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|...+.+.+.. .+.+..++||.+-.|....... -....... ...++..... ..+...+|+|++++
T Consensus 148 Kaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~p~eva~~~~ 223 (258)
T PRK06398 148 KHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERK---IREWGEMHPM-KRVGKPEEVAYVVA 223 (258)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHH---HHhhhhcCCc-CCCcCHHHHHHHHH
Confidence 99999988764 3778889999886552211000 00000000 0000011111 24678999999999
Q ss_pred HHhcCC--CCCCcEEEEeCCcc
Q psy4233 225 AACKDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 225 ~~~~~~--~~~g~~~~i~~~~~ 244 (303)
+++... ...|+.+.+.++..
T Consensus 224 ~l~s~~~~~~~G~~i~~dgg~~ 245 (258)
T PRK06398 224 FLASDLASFITGECVTVDGGLR 245 (258)
T ss_pred HHcCcccCCCCCcEEEECCccc
Confidence 998743 23677888777643
No 145
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=7.6e-19 Score=149.18 Aligned_cols=212 Identities=17% Similarity=0.138 Sum_probs=146.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++++||||+|.||.+++++|+++|++|+++.|+.....+.+.. .++.++.+|++|++++.++++ ++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4568999999999999999999999999999887765433332221 247899999999998887765 47
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHH----HHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLAR----LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
|+|||++|.... ......+++|+.++..+.+ .+++.+..++|++||...+... ......|+.+|
T Consensus 81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----~~~~~~Y~asK 156 (255)
T PRK06463 81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA----AEGTTFYAITK 156 (255)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC----CCCccHhHHHH
Confidence 999999986321 2234678889999655544 4444455699999998877421 12346799999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCch---hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKF---LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
...+.+++.. +++++.++||.+-.+.... ...............+ . ..+...+|+|++++.+
T Consensus 157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va~~~~~l 228 (255)
T PRK06463 157 AGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV-------L-KTTGKPEDIANIVLFL 228 (255)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC-------c-CCCcCHHHHHHHHHHH
Confidence 9999887763 6899999999886542110 0000000000011111 1 3467899999999999
Q ss_pred hcCCC--CCCcEEEEeCCc
Q psy4233 227 CKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 227 ~~~~~--~~g~~~~i~~~~ 243 (303)
+.... ..|+.+.+.++.
T Consensus 229 ~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 229 ASDDARYITGQVIVADGGR 247 (255)
T ss_pred cChhhcCCCCCEEEECCCe
Confidence 97543 368888887765
No 146
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.83 E-value=3.5e-19 Score=148.82 Aligned_cols=211 Identities=15% Similarity=0.041 Sum_probs=149.3
Q ss_pred EEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEEEEccccC
Q psy4233 22 TVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVVINLIGRE 98 (303)
Q Consensus 22 lVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~vi~~a~~~ 98 (303)
+||||+|+||++++++|+++|++|++++|+...............+++++.+|++|.+++.++++. +|.+||++|..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 599999999999999999999999999997433222111111124588999999999999988875 79999999863
Q ss_pred cc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh----
Q psy4233 99 FA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE---- 166 (303)
Q Consensus 99 ~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~---- 166 (303)
.. ...+..+++|+.++.+++++....+..++|++||...+.. ..+...|+.+|...+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~ 155 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP-----SASGVLQGAINAALEALARGLALEL 155 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC-----CCcchHHHHHHHHHHHHHHHHHHHh
Confidence 22 2345678899999999999666556679999999988753 234568999999999988775
Q ss_pred -CCCEEEEeecceeeCCCchh--hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCc
Q psy4233 167 -FPEATIFRPSDMYGSGDKFL--RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPK 243 (303)
Q Consensus 167 -~~~~~ilrp~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~ 243 (303)
.++++.++|+.+-.|..... ..............+. ..+...+|+|++++.++......|+.|++.+++
T Consensus 156 ~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg~ 227 (230)
T PRK07041 156 APVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA--------RRVGQPEDVANAILFLAANGFTTGSTVLVDGGH 227 (230)
T ss_pred hCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhcCCCcCCcEEEeCCCe
Confidence 45677888887765421110 0000111101111121 124678999999999998665668899998876
Q ss_pred cc
Q psy4233 244 RY 245 (303)
Q Consensus 244 ~~ 245 (303)
++
T Consensus 228 ~~ 229 (230)
T PRK07041 228 AI 229 (230)
T ss_pred ec
Confidence 53
No 147
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.83 E-value=3.8e-19 Score=152.55 Aligned_cols=191 Identities=18% Similarity=0.138 Sum_probs=137.7
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
++++++++||||||.||++++++|+++|++|++++|+.......... ..+++++.+|++|++++.++++ +
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAE---LGLVVGGPLDVTDPASFAAFLDAVEADLGP 78 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---hccceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46678999999999999999999999999999999875432211111 1248889999999988766553 3
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|++||++|.... ......+++|+.++..+++++ ++.+..+||++||...+.. ......|+.+
T Consensus 79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~as 153 (273)
T PRK07825 79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP-----VPGMATYCAS 153 (273)
T ss_pred CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC-----CCCCcchHHH
Confidence 7999999996322 122457788998888777665 4556679999999877642 1345789999
Q ss_pred HHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+.+. .++++++++|+.+..+.... .+ +... ..+++.+|+|++++.++.
T Consensus 154 Kaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~--------------~~----~~~~-~~~~~~~~va~~~~~~l~ 214 (273)
T PRK07825 154 KHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAG--------------TG----GAKG-FKNVEPEDVAAAIVGTVA 214 (273)
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcc--------------cc----cccC-CCCCCHHHHHHHHHHHHh
Confidence 9887765443 37999999999876442110 00 0111 357899999999999998
Q ss_pred CCCC
Q psy4233 229 DPDA 232 (303)
Q Consensus 229 ~~~~ 232 (303)
++..
T Consensus 215 ~~~~ 218 (273)
T PRK07825 215 KPRP 218 (273)
T ss_pred CCCC
Confidence 6543
No 148
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.83 E-value=5.1e-19 Score=148.75 Aligned_cols=193 Identities=18% Similarity=0.077 Sum_probs=141.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++++||||+|+||.+++++|+++|++|++++|+.....+.... .....+++++.+|+++++++.++++ +
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4567999999999999999999999999999999975432211111 1112368899999999999888775 5
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ...+..+++|+.++.++.+++.. .+.+++|++||...+... .+...|+.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~~~~~Y~~s 159 (239)
T PRK07666 85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA-----AVTSAYSAS 159 (239)
T ss_pred ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-----CCCcchHHH
Confidence 8999999986322 12245788999998888887753 456789999998765431 344679999
Q ss_pred HHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+++. .++++++++||.+.++...... .+ . ... ..++..+|+|++++.++.
T Consensus 160 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------------~~---~-~~~-~~~~~~~~~a~~~~~~l~ 222 (239)
T PRK07666 160 KFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG------------LT---D-GNP-DKVMQPEDLAEFIVAQLK 222 (239)
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc------------cc---c-cCC-CCCCCHHHHHHHHHHHHh
Confidence 9998887654 3799999999999876322110 00 0 011 246889999999999998
Q ss_pred CC
Q psy4233 229 DP 230 (303)
Q Consensus 229 ~~ 230 (303)
++
T Consensus 223 ~~ 224 (239)
T PRK07666 223 LN 224 (239)
T ss_pred CC
Confidence 64
No 149
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.83 E-value=4.6e-19 Score=150.73 Aligned_cols=188 Identities=14% Similarity=0.043 Sum_probs=137.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------cCE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------SNV 90 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D~ 90 (303)
+++|+||||+|+||+++++.|+++|++|++++|+.....+.........++.++.+|++|.+++.++++. +|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 5799999999999999999999999999999997543222111111112688999999999988876643 799
Q ss_pred EEEccccCcc---------ccchhhhhhhcchHHHHHH----HHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 91 VINLIGREFA---------TKNFTIADANVEIPARLAR----LSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 91 vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+||++|.... ...+..+++|+.++.++++ ++++.+..++|++||...+.. ......|+.+|.
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~asK~ 156 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG-----LPGAGAYSASKA 156 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----CCCCcchHHHHH
Confidence 9999986321 1234678899999988777 445566679999999766532 123468999999
Q ss_pred HHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
..+.+++. .++++++++||.+.+|.... . .. .. -.++..+++|+.++.++.++
T Consensus 157 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~----------~--~~-------~~-~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 157 AAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH----------N--PY-------PM-PFLMDADRFAARAARAIARG 216 (257)
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc----------C--CC-------CC-CCccCHHHHHHHHHHHHhCC
Confidence 99988755 37999999999998763210 0 00 00 01368999999999999753
No 150
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.83 E-value=3e-19 Score=151.74 Aligned_cols=207 Identities=11% Similarity=-0.026 Sum_probs=137.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-ccCEEEEcc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-YSNVVINLI 95 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~~a 95 (303)
+++|+||||||+||++++++|+++|++|++++|+.....+..... ....+++++.+|+.|++++..++. ++|+|||++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 568999999999999999999999999999999753321111100 112358899999999999998887 699999999
Q ss_pred ccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHH
Q psy4233 96 GREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV 163 (303)
Q Consensus 96 ~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~ 163 (303)
|.... ...+..+++|+.++.++.++ +++.+.+++|++||....... .....|+.+|...|.+.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-----~~~~~Y~~sK~a~~~~~ 156 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG-----PFTGAYCASKHALEAIA 156 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC-----CCcchhHHHHHHHHHHH
Confidence 86322 12234667788877665554 455666899999997654321 23468999999999866
Q ss_pred Hh-------hCCCEEEEeecceeeCCCc-hhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233 164 LR-------EFPEATIFRPSDMYGSGDK-FLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD 231 (303)
Q Consensus 164 ~~-------~~~~~~ilrp~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 231 (303)
+. .+++++++|||.+..+... ....+..+.......++.. .+... .+++..+|++..++.++..+.
T Consensus 157 ~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~~~ 230 (257)
T PRK09291 157 EAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPE-DLAFP-LEQFDPQEMIDAMVEVIPADT 230 (257)
T ss_pred HHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhh-hhhcc-ccCCCHHHHHHHHHHHhcCCC
Confidence 54 4799999999987543211 1111111110000001110 01112 356889999999999887543
No 151
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.82 E-value=6.7e-19 Score=148.86 Aligned_cols=211 Identities=12% Similarity=-0.011 Sum_probs=144.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++++||||+|+||++++++|+++|++|++++|+.....+..... ..++.++++|+.|.+++..+++ ++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL--GESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 45689999999999999999999999999999988643222111111 1357889999999887665443 47
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCcc-CCCCCCCCCCCCCchhHHHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNA-DPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K~ 157 (303)
|+|||++|.... ..++..+++|+.++.++++++... ...++|++||... ++. .....|+.+|.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~------~~~~~Y~~sK~ 155 (249)
T PRK06500 82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM------PNSSVYAASKA 155 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC------CCccHHHHHHH
Confidence 999999986321 233467899999999999999742 2247777777544 442 34578999999
Q ss_pred HHHHHHHhh-------CCCEEEEeecceeeCCCchh----hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFL----RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
..|.+++.. ++++++++||.+++|..... .....+.+...+..++ .-+...+|+|++++++
T Consensus 156 a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l 227 (249)
T PRK06500 156 ALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL--------GRFGTPEEIAKAVLYL 227 (249)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence 999988542 68999999999998742110 0111111111111121 1256899999999999
Q ss_pred hcCCC--CCCcEEEEeCC
Q psy4233 227 CKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 227 ~~~~~--~~g~~~~i~~~ 242 (303)
+..+. ..|....+.++
T Consensus 228 ~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 228 ASDESAFIVGSEIIVDGG 245 (249)
T ss_pred cCccccCccCCeEEECCC
Confidence 87532 25666666555
No 152
>PRK12743 oxidoreductase; Provisional
Probab=99.82 E-value=1.1e-18 Score=148.27 Aligned_cols=212 Identities=13% Similarity=0.097 Sum_probs=148.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++||||+|+||+++++.|+++|++|+++.|++....+... ......+++++.+|++|++++..+++ .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999999988775443322211 11112458899999999988776654 37
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
|+|||++|.... +.....+++|+.++..+++++... + -.++|++||..... +..+...|+.+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----~~~~~~~Y~~s 156 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT-----PLPGASAYTAA 156 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC-----CCCCcchhHHH
Confidence 999999986322 223467889999999999887543 1 24899999976543 22445789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+++.. +++++.++||.+++|...... ...........++ ..+.+.+|+|++++.++.
T Consensus 157 K~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~ 226 (256)
T PRK12743 157 KHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD--SDVKPDSRPGIPL--------GRPGDTHEIASLVAWLCS 226 (256)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC--hHHHHHHHhcCCC--------CCCCCHHHHHHHHHHHhC
Confidence 99999887653 689999999999987432111 0111001112221 235688999999999987
Q ss_pred CCC--CCCcEEEEeCCcc
Q psy4233 229 DPD--AAGKIYQAVGPKR 244 (303)
Q Consensus 229 ~~~--~~g~~~~i~~~~~ 244 (303)
... ..|.++.+.++..
T Consensus 227 ~~~~~~~G~~~~~dgg~~ 244 (256)
T PRK12743 227 EGASYTTGQSLIVDGGFM 244 (256)
T ss_pred ccccCcCCcEEEECCCcc
Confidence 533 3688888877754
No 153
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.82 E-value=3.9e-19 Score=150.04 Aligned_cols=214 Identities=14% Similarity=0.070 Sum_probs=148.8
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEe-ecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIP-YRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
.+++++++||||||+||+++++.|+++|++|+++ .|+.......... .....++.++.+|++|++++.++++
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3567899999999999999999999999999998 7764332111111 1112458899999999998887765
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|+|||++|.... ...+..+++|+.++.++++++.. .+.+++|++||...+... .....|+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----~~~~~y~ 156 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA-----SCEVLYS 156 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC-----CCccHHH
Confidence 68999999986421 12346788899998888887754 345689999997765421 2345799
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|...+.+++.. +++++.++||.+..+........ ........ ... ..+...+|+|++++.+
T Consensus 157 ~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~--~~~~~~~~-------~~~-~~~~~~~~va~~~~~l 226 (247)
T PRK05565 157 ASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE--DKEGLAEE-------IPL-GRLGKPEEIAKVVLFL 226 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH--HHHHHHhc-------CCC-CCCCCHHHHHHHHHHH
Confidence 9998877766553 78999999999876543221110 10000000 111 3467999999999999
Q ss_pred hcCC--CCCCcEEEEeCCc
Q psy4233 227 CKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~~~ 243 (303)
+.+. ...|+.+++.++.
T Consensus 227 ~~~~~~~~~g~~~~~~~~~ 245 (247)
T PRK05565 227 ASDDASYITGQIITVDGGW 245 (247)
T ss_pred cCCccCCccCcEEEecCCc
Confidence 9753 2367788887653
No 154
>PRK09242 tropinone reductase; Provisional
Probab=99.82 E-value=1e-18 Score=148.55 Aligned_cols=218 Identities=15% Similarity=0.093 Sum_probs=151.8
Q ss_pred CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc--
Q psy4233 12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK-- 86 (303)
Q Consensus 12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~-- 86 (303)
.+..+.+++++||||+|.||.++++.|+++|++|++++|+......... ......++.++.+|++|.+++..++.
T Consensus 3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3455678899999999999999999999999999999997533221111 11012468889999999988766554
Q ss_pred -----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCC
Q psy4233 87 -----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGG 149 (303)
Q Consensus 87 -----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~ 149 (303)
++|+|||++|.... ......+++|+.++.++++++. +.+..++|++||...+... ...
T Consensus 83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----~~~ 157 (257)
T PRK09242 83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----RSG 157 (257)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----CCC
Confidence 47999999986321 2334678899999999988874 3455699999998776532 345
Q ss_pred CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
..|+.+|...+.+++.. +++++.++||.+.+|...................++ .-+...+|++.+
T Consensus 158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~ 229 (257)
T PRK09242 158 APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM--------RRVGEPEEVAAA 229 (257)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC--------CCCcCHHHHHHH
Confidence 78999999999988753 689999999999887532110001111101111111 235678999999
Q ss_pred HHHHhcCCC--CCCcEEEEeCC
Q psy4233 223 IVAACKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 223 ~~~~~~~~~--~~g~~~~i~~~ 242 (303)
++.++.... ..|+.+.+.++
T Consensus 230 ~~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 230 VAFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred HHHHhCcccccccCCEEEECCC
Confidence 999987532 35777777655
No 155
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.82 E-value=1.1e-18 Score=148.27 Aligned_cols=218 Identities=14% Similarity=0.153 Sum_probs=151.6
Q ss_pred cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcc----
Q psy4233 13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY---- 87 (303)
Q Consensus 13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 87 (303)
++.+++++++||||+|+||++++++|+++|++|+++.|+.....+... ......++.++.+|++|.+++.+++++
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 344678999999999999999999999999999999997543222111 111124588999999999988876653
Q ss_pred ---cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 88 ---SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 88 ---~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
.|+|||++|.... ...+..+++|+.++.++.+++.. .+..++|++||....... .....|
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~~~~~Y 160 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR-----AGDAVY 160 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-----CCccHh
Confidence 5999999996322 12335688899999888866643 566799999998765321 234689
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+.+|...+.+++.. ++++..++||.+.++.......-...........+. ..+++.+|++++++.
T Consensus 161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~ 232 (256)
T PRK06124 161 PAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPL--------GRWGRPEEIAGAAVF 232 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCC--------CCCCCHHHHHHHHHH
Confidence 99999998877652 689999999999987422110001111101111111 247899999999999
Q ss_pred HhcCCC--CCCcEEEEeCCc
Q psy4233 226 ACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 226 ~~~~~~--~~g~~~~i~~~~ 243 (303)
++..+. ..|+.+.+.++.
T Consensus 233 l~~~~~~~~~G~~i~~dgg~ 252 (256)
T PRK06124 233 LASPAASYVNGHVLAVDGGY 252 (256)
T ss_pred HcCcccCCcCCCEEEECCCc
Confidence 998643 357777776553
No 156
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1e-18 Score=148.03 Aligned_cols=216 Identities=14% Similarity=0.079 Sum_probs=148.4
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+++++++++||||+|+||.+++++|+++|++|++++|+........+.. ....+++++++|+.|.+++.++++
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3466789999999999999999999999999999999754322211111 111347889999999988876654
Q ss_pred -ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 87 -YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 87 -~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
.+|++||+++.... ...+..+++|+.++..+++++ ++.+..++|++||...... ......|
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y 158 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----GDFQGIY 158 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----CCCCcch
Confidence 37999999985211 122357889999988887766 4445679999998765431 2345789
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+.+|...+.+++.. +++++.+.||.+..+.......-...........+. ..+...+|+|++++.
T Consensus 159 ~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~ 230 (252)
T PRK07035 159 SITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL--------RRHAEPSEMAGAVLY 230 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCC--------CCcCCHHHHHHHHHH
Confidence 99999999988764 689999999988765321110000111111111221 236789999999999
Q ss_pred HhcCCC--CCCcEEEEeCC
Q psy4233 226 ACKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 226 ~~~~~~--~~g~~~~i~~~ 242 (303)
++.+.. ..|+++.+.++
T Consensus 231 l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 231 LASDASSYTTGECLNVDGG 249 (252)
T ss_pred HhCccccCccCCEEEeCCC
Confidence 997543 36777777654
No 157
>PRK12742 oxidoreductase; Provisional
Probab=99.82 E-value=1.6e-18 Score=145.44 Aligned_cols=209 Identities=13% Similarity=0.143 Sum_probs=146.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVVI 92 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~vi 92 (303)
+++++|+||||+|.||++++++|+++|++|+++.|+..+..+.+... .+++++.+|++|.+++.+.++. +|++|
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE---TGATAVQTDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH---hCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence 56789999999999999999999999999988776543322222111 1367889999999888876653 89999
Q ss_pred EccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHH
Q psy4233 93 NLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKE 162 (303)
Q Consensus 93 ~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~ 162 (303)
|++|.... +..+..+++|+.++..+++.+... +..++|++||..... .|..+...|+.+|...+.+
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~~Y~~sKaa~~~~ 156 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----MPVAGMAAYAASKSALQGM 156 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----CCCCCCcchHHhHHHHHHH
Confidence 99986321 233568889999998887665543 235899999976532 1224567899999999988
Q ss_pred HHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC--CC
Q psy4233 163 VLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD--AA 233 (303)
Q Consensus 163 ~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~ 233 (303)
++.. ++.++.++||.+..+........... .....+. ..+.+.+|+|+++..++.... ..
T Consensus 157 ~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~---~~~~~~~--------~~~~~p~~~a~~~~~l~s~~~~~~~ 225 (237)
T PRK12742 157 ARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDM---MHSFMAI--------KRHGRPEEVAGMVAWLAGPEASFVT 225 (237)
T ss_pred HHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHH---HHhcCCC--------CCCCCHHHHHHHHHHHcCcccCccc
Confidence 8653 68999999999987643211111111 1111111 235789999999999987532 36
Q ss_pred CcEEEEeCC
Q psy4233 234 GKIYQAVGP 242 (303)
Q Consensus 234 g~~~~i~~~ 242 (303)
|..+.+.++
T Consensus 226 G~~~~~dgg 234 (237)
T PRK12742 226 GAMHTIDGA 234 (237)
T ss_pred CCEEEeCCC
Confidence 777777654
No 158
>PRK07985 oxidoreductase; Provisional
Probab=99.82 E-value=1.1e-18 Score=151.13 Aligned_cols=215 Identities=12% Similarity=0.053 Sum_probs=149.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc-ccccchh--cCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY-DVRDLRL--CGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+++++++||||+|+||.+++++|+++|++|++..|+... ..+.+.. .....++.++.+|++|.+++.++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 456799999999999999999999999999987765322 1111111 0112357889999999988776654
Q ss_pred -ccCEEEEccccCc---------cccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 87 -YSNVVINLIGREF---------ATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 87 -~~D~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
++|++||+||... .......+++|+.++..+++++... .-.++|++||...+... .....|+.
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~-----~~~~~Y~a 201 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS-----PHLLDYAA 201 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC-----CCcchhHH
Confidence 3799999998531 1233567899999999999988642 12489999999887531 23468999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
+|...+.+.+.. ++++..++||++++|.......-...........+. ..+...+|+|+++++++
T Consensus 202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~r~~~pedva~~~~fL~ 273 (294)
T PRK07985 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM--------KRAGQPAELAPVYVYLA 273 (294)
T ss_pred HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC--------CCCCCHHHHHHHHHhhh
Confidence 999999877653 789999999999988432100000111101111221 23678999999999999
Q ss_pred cCCC--CCCcEEEEeCCc
Q psy4233 228 KDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 228 ~~~~--~~g~~~~i~~~~ 243 (303)
..+. ..|+++.+.++.
T Consensus 274 s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 274 SQESSYVTAEVHGVCGGE 291 (294)
T ss_pred ChhcCCccccEEeeCCCe
Confidence 7533 367888887764
No 159
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.82 E-value=1.6e-18 Score=145.62 Aligned_cols=205 Identities=17% Similarity=0.150 Sum_probs=144.5
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhcc-------cCEE
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIKY-------SNVV 91 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D~v 91 (303)
|+|||++|+||++++++|+++|++|++++|+..+...... ......+++++.+|++|.+++.+++.+ +|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5899999999999999999999999999987532211111 111113578999999999988877654 6999
Q ss_pred EEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCcc-CCCCCCCCCCCCCchhHHHHH
Q psy4233 92 INLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNA-DPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 92 i~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K~~ 158 (303)
||++|.... ...+..++.|+.++.++++++.. .+.++++++||... ++. .....|+.+|..
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------~~~~~y~~~k~a 154 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------AGQANYAASKAG 154 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC------CCCchhHHHHHH
Confidence 999996422 23356788999999999998865 34569999999754 442 234689999998
Q ss_pred HHHHHHhh-------CCCEEEEeecceeeCCCchhh-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLR-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
.+.+++.. ++.+++++|+.+.++...... ..... ....++. ..+.+.+|+|++++.++..+
T Consensus 155 ~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~a~~~~~~~~~~ 223 (239)
T TIGR01830 155 VIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKK---ILSQIPL--------GRFGTPEEVANAVAFLASDE 223 (239)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHH---HHhcCCc--------CCCcCHHHHHHHHHHHhCcc
Confidence 88766552 789999999988765322111 11111 1111221 23678999999999988543
Q ss_pred --CCCCcEEEEeCC
Q psy4233 231 --DAAGKIYQAVGP 242 (303)
Q Consensus 231 --~~~g~~~~i~~~ 242 (303)
...|++|++.++
T Consensus 224 ~~~~~g~~~~~~~g 237 (239)
T TIGR01830 224 ASYITGQVIHVDGG 237 (239)
T ss_pred cCCcCCCEEEeCCC
Confidence 347889998654
No 160
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.82 E-value=6.8e-19 Score=150.77 Aligned_cols=197 Identities=14% Similarity=0.067 Sum_probs=137.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV 90 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~ 90 (303)
|+|+||||||+||++++++|+++|++|++++|+.....+... ......++.++.+|+.|.+++.++++ ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999987543222211 11122468899999999988887665 4899
Q ss_pred EEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 91 VINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
|||++|.... ...+..+++|+.++.++.++ +++.+..++|++||...+.. ......|+.+|..
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----~~~~~~Y~~sKaa 155 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ-----GPAMSSYNVAKAG 155 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-----CCCchHHHHHHHH
Confidence 9999996322 12234677888877776665 45566679999999877652 2345789999998
Q ss_pred HHHHHHh-------hCCCEEEEeecceeeCCCchhh-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 159 GEKEVLR-------EFPEATIFRPSDMYGSGDKFLR-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 159 ~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
.+.+.+. .++++++++||.+.++...... ............. . ..+++++|+|+.++.++++
T Consensus 156 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 156 VVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL--------E-KSPITAADIADYIYQQVAK 225 (270)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh--------h-cCCCCHHHHHHHHHHHHhC
Confidence 7766544 2689999999999877432111 0000000000000 1 2468999999999999985
No 161
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.82 E-value=1.3e-18 Score=146.88 Aligned_cols=212 Identities=14% Similarity=0.072 Sum_probs=140.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEee-cCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPY-RGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY-------S 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~ 88 (303)
|++++||||+|+||++++++|+++|++|+++. |+.....+... ......++..+.+|+.|++++.+++++ +
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999999999998754 44322111111 111123588899999999988887654 5
Q ss_pred CEEEEccccCccc---------cchhhhhhhcchHHHHHHHHHhc-------CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 89 NVVINLIGREFAT---------KNFTIADANVEIPARLARLSKEM-------GVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 89 D~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
|+|||++|..... .....+++|+.++..+++++... ...++|++||...+... | .....|
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~---~-~~~~~Y 156 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA---P-GEYVDY 156 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---C-Ccccch
Confidence 8999999963211 12357888999988777665432 12469999998664321 1 112469
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+.+|...+.+++.. +++++++||+.+|+|....... ...........++ .-..+.+|+|++++.
T Consensus 157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~dva~~~~~ 227 (247)
T PRK09730 157 AASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE-PGRVDRVKSNIPM--------QRGGQPEEVAQAIVW 227 (247)
T ss_pred HhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC-HHHHHHHHhcCCC--------CCCcCHHHHHHHHHh
Confidence 99999999877642 7899999999999985321111 1111101111221 113478999999999
Q ss_pred HhcCC--CCCCcEEEEeCC
Q psy4233 226 ACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 226 ~~~~~--~~~g~~~~i~~~ 242 (303)
++... ...|+.+.+.++
T Consensus 228 ~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 228 LLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred hcChhhcCccCcEEecCCC
Confidence 98753 245777777654
No 162
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.6e-18 Score=145.81 Aligned_cols=217 Identities=13% Similarity=0.043 Sum_probs=149.6
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-h-hcCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-R-LCGDLGQVLFQPYHPRNDDEIRKAIKY----- 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 87 (303)
.+++++++||||+|.||++++++|+++|++|++++|+.....+.. . ......++..+.+|+.|.+++.++++.
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356789999999999999999999999999999998754322211 1 111123578899999999888876653
Q ss_pred --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
.|++||++|.... ...+..+++|+.++..+++++ ++.+..++|++||......... .....|+
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---~~~~~Y~ 161 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---LLQAHYN 161 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---CCcchHH
Confidence 6999999996322 233467889999998777765 3344568999999876532111 1246899
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|...+.+.+.. ++++.+++||.+.++....... ...........|+ ..+...+|+|.+++++
T Consensus 162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~-~~~~~~~~~~~p~--------~r~~~~~dva~~~~~l 232 (254)
T PRK06114 162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEM-VHQTKLFEEQTPM--------QRMAKVDEMVGPAVFL 232 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccc-hHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence 9999988877663 6899999999998774321111 1111101122221 2357889999999999
Q ss_pred hcCC--CCCCcEEEEeCCc
Q psy4233 227 CKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~~~ 243 (303)
+.+. ...|+++.+.+|.
T Consensus 233 ~s~~~~~~tG~~i~~dgg~ 251 (254)
T PRK06114 233 LSDAASFCTGVDLLVDGGF 251 (254)
T ss_pred cCccccCcCCceEEECcCE
Confidence 8753 2367888877654
No 163
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.6e-18 Score=145.97 Aligned_cols=194 Identities=13% Similarity=0.017 Sum_probs=140.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+|++++||||+|.||+.++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++..+++ ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999999999999999999999999999999754322211111 112458899999999998877665 38
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
|+|||++|.... ......+++|+.++.++++++ ++.+..++|++||...+.. ......|+.+|
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~sK 159 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA-----FPQWGAYCVSK 159 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC-----CCCccHHHHHH
Confidence 999999986321 223456788999888877765 4445568999999987753 23357899999
Q ss_pred HHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
...+.+.+. .+++++++|||.+-.|..... ...... .. ...+..+|+|++++.++.+
T Consensus 160 ~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~-----------~~~~~~----~~-~~~~~~~~va~~~~~l~~~ 223 (241)
T PRK07454 160 AALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE-----------TVQADF----DR-SAMLSPEQVAQTILHLAQL 223 (241)
T ss_pred HHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc-----------cccccc----cc-ccCCCHHHHHHHHHHHHcC
Confidence 999987754 279999999999876642110 000000 01 2358999999999999986
Q ss_pred CC
Q psy4233 230 PD 231 (303)
Q Consensus 230 ~~ 231 (303)
+.
T Consensus 224 ~~ 225 (241)
T PRK07454 224 PP 225 (241)
T ss_pred Cc
Confidence 64
No 164
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.81 E-value=1.8e-18 Score=146.88 Aligned_cols=216 Identities=13% Similarity=0.122 Sum_probs=150.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++|+||||+|+||.+++++|+++|++|++++|+.......... .....++.++.+|++|.+++.++++ +
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5678999999999999999999999999999998865432111111 1111357889999999998877554 3
Q ss_pred cCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 88 SNVVINLIGREFA-------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 88 ~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
+|++||++|.... ...+..+++|+.++.++++++. +.+..++|++||...... ..+...|+.+|
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~sK 163 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----NINMTSYASSK 163 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC-----CCCcchhHHHH
Confidence 7999999986321 2223458899999999999885 334459999999876532 23456899999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
...+.+++.. ++.+.++.||.+..+..... ..........+..++ ..+...+|++++++.++..
T Consensus 164 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~d~a~~~~~l~~~ 234 (255)
T PRK06113 164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-ITPEIEQKMLQHTPI--------RRLGQPQDIANAALFLCSP 234 (255)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc-cCHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHcCc
Confidence 9999988763 57888999998876532210 001111111112221 2367999999999999975
Q ss_pred CC--CCCcEEEEeCCccc
Q psy4233 230 PD--AAGKIYQAVGPKRY 245 (303)
Q Consensus 230 ~~--~~g~~~~i~~~~~~ 245 (303)
.. ..|+.+++.++...
T Consensus 235 ~~~~~~G~~i~~~gg~~~ 252 (255)
T PRK06113 235 AASWVSGQILTVSGGGVQ 252 (255)
T ss_pred cccCccCCEEEECCCccc
Confidence 32 36889999887543
No 165
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2.3e-18 Score=145.98 Aligned_cols=215 Identities=14% Similarity=0.110 Sum_probs=144.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
+++++++||||+|+||.+++++|+++|++|++..++.....+... ......++..+.+|+.|.+++...+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 346899999999999999999999999999887543322221111 11112347788999999876654331
Q ss_pred ------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233 87 ------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGS 150 (303)
Q Consensus 87 ------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~ 150 (303)
++|++||+||.... +..+..+++|+.++..+++++... ...+||++||...+.. .....
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~ 156 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----LPDFI 156 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-----CCCch
Confidence 58999999995321 112457789999999999877543 2249999999987642 23346
Q ss_pred chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233 151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
.|+.+|+.++.+++.. ++++..+.||.+.++....... ........... ... ..+.+.+|+|+++
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~------~~~-~~~~~~~dva~~~ 228 (252)
T PRK12747 157 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-DPMMKQYATTI------SAF-NRLGEVEDIADTA 228 (252)
T ss_pred hHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-CHHHHHHHHhc------Ccc-cCCCCHHHHHHHH
Confidence 8999999999887753 6899999999998774321000 00000000001 011 3468999999999
Q ss_pred HHHhcCCC--CCCcEEEEeCCc
Q psy4233 224 VAACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 224 ~~~~~~~~--~~g~~~~i~~~~ 243 (303)
+.++.... ..|+.+.+.++.
T Consensus 229 ~~l~s~~~~~~~G~~i~vdgg~ 250 (252)
T PRK12747 229 AFLASPDSRWVTGQLIDVSGGS 250 (252)
T ss_pred HHHcCccccCcCCcEEEecCCc
Confidence 99987432 367788887653
No 166
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.5e-18 Score=147.87 Aligned_cols=217 Identities=14% Similarity=0.045 Sum_probs=150.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC---CCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG---DLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+++++++||||+|.||.+++++|+++|++|++++|+.....+...... ...++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999997543222111111 12458899999999988887765
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
.+|++||+||.... +..+..+++|+.++..+++++. +.+..++|++||...+... .....|+
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~ 159 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII-----PGCFPYP 159 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-----CCchHHH
Confidence 48999999996321 2334578899999988888764 3345689999998765421 2346799
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hH---HHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RY---YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
.+|...+.+.+.. ++++..++||.+-.+..... .. ............|. .-+...+|+|.+
T Consensus 160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~r~~~~~~va~~ 231 (260)
T PRK07063 160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM--------KRIGRPEEVAMT 231 (260)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC--------CCCCCHHHHHHH
Confidence 9999999988764 68899999998876532100 00 00000001111111 235789999999
Q ss_pred HHHHhcCC--CCCCcEEEEeCCccc
Q psy4233 223 IVAACKDP--DAAGKIYQAVGPKRY 245 (303)
Q Consensus 223 ~~~~~~~~--~~~g~~~~i~~~~~~ 245 (303)
+++++... ...|+...+.+|..+
T Consensus 232 ~~fl~s~~~~~itG~~i~vdgg~~~ 256 (260)
T PRK07063 232 AVFLASDEAPFINATCITIDGGRSV 256 (260)
T ss_pred HHHHcCccccccCCcEEEECCCeee
Confidence 99999753 237888888777544
No 167
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=3.4e-18 Score=143.35 Aligned_cols=208 Identities=15% Similarity=0.052 Sum_probs=146.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH-HHHHHHhcccCEEEE
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-DEIRKAIKYSNVVIN 93 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~D~vi~ 93 (303)
.+++++++||||+|+||+++++.|+++|++|++++|+..... ..++.++.+|+.++ +.+.+.+..+|+|||
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~id~lv~ 73 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------SGNFHFLQLDLSDDLEPLFDWVPSVDILCN 73 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------CCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence 356789999999999999999999999999999998743211 13588999999987 444445566899999
Q ss_pred ccccCc---------cccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233 94 LIGREF---------ATKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE 160 (303)
Q Consensus 94 ~a~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e 160 (303)
++|... ....+..+++|+.++.++++++.. .+..++|++||...+... .....|+.+|...+
T Consensus 74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~ 148 (235)
T PRK06550 74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG-----GGGAAYTASKHALA 148 (235)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----CCCcccHHHHHHHH
Confidence 998521 112345788999999999988753 344589999998765421 23468999999988
Q ss_pred HHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--C
Q psy4233 161 KEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--D 231 (303)
Q Consensus 161 ~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~ 231 (303)
.+.+.. ++++++++||++.++.......-...........+ . ..+...+|+|++++.++.+. .
T Consensus 149 ~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~a~~~~~l~s~~~~~ 220 (235)
T PRK06550 149 GFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP-------I-KRWAEPEEVAELTLFLASGKADY 220 (235)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC-------c-CCCCCHHHHHHHHHHHcChhhcc
Confidence 877652 68999999999987743210000011110111111 1 34688999999999999753 3
Q ss_pred CCCcEEEEeCCc
Q psy4233 232 AAGKIYQAVGPK 243 (303)
Q Consensus 232 ~~g~~~~i~~~~ 243 (303)
..|+++.+.++.
T Consensus 221 ~~g~~~~~~gg~ 232 (235)
T PRK06550 221 MQGTIVPIDGGW 232 (235)
T ss_pred CCCcEEEECCce
Confidence 367777776653
No 168
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.4e-18 Score=149.42 Aligned_cols=154 Identities=12% Similarity=0.072 Sum_probs=120.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--------ccC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--------YSN 89 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~D 89 (303)
+++|+||||+|+||++++++|.++|++|++++|+.... +.+.. .+++++.+|++|.+++.++++ .+|
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~-~~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV-AALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 56899999999999999999999999999999975432 22221 258899999999988876654 369
Q ss_pred EEEEccccCcc--------ccchhhhhhhcch----HHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEI----PARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+|||+||.... +..+..+++|+.+ +..++..+++.+..+||++||...+. +......|+.+|+
T Consensus 79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----~~~~~~~Y~asK~ 153 (277)
T PRK05993 79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----PMKYRGAYNASKF 153 (277)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----CCCccchHHHHHH
Confidence 99999986322 1224578889888 55667777777778999999987654 2234578999999
Q ss_pred HHHHHHHh-------hCCCEEEEeecceeeC
Q psy4233 158 QGEKEVLR-------EFPEATIFRPSDMYGS 181 (303)
Q Consensus 158 ~~e~~~~~-------~~~~~~ilrp~~~~G~ 181 (303)
..+.+.+. .++++++++||.+-.+
T Consensus 154 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 154 AIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 99998765 3799999999988765
No 169
>PRK08643 acetoin reductase; Validated
Probab=99.81 E-value=3e-18 Score=145.56 Aligned_cols=213 Identities=15% Similarity=0.072 Sum_probs=145.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
+++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++++|++|++++.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999999754322211111 112458889999999998877665 479
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
+|||++|.... +..+..+++|+.++..+++++.. .+ ..++|++||...+... .....|+.+|
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK 156 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN-----PELAVYSSTK 156 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC-----CCCchhHHHH
Confidence 99999986322 12245678899988777776643 22 2489999997664321 2346899999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhh-HHH-------HH-HHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR-YYG-------HM-WRHVFRKLAVYKKGEETIKQPVYVGDVA 220 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~-~~~-------~~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva 220 (303)
...+.+.+.. +++++.++||.+.+|...... ... .+ .......++ . ..+...+|+|
T Consensus 157 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va 228 (256)
T PRK08643 157 FAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDIT-------L-GRLSEPEDVA 228 (256)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCC-------C-CCCcCHHHHH
Confidence 9988877652 689999999999876321100 000 00 000001111 1 2357899999
Q ss_pred HHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233 221 AAIVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 221 ~~~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
.++..++... ...|+.+.+.++.
T Consensus 229 ~~~~~L~~~~~~~~~G~~i~vdgg~ 253 (256)
T PRK08643 229 NCVSFLAGPDSDYITGQTIIVDGGM 253 (256)
T ss_pred HHHHHHhCccccCccCcEEEeCCCe
Confidence 9999999743 3478888887664
No 170
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.8e-18 Score=145.02 Aligned_cols=214 Identities=14% Similarity=0.063 Sum_probs=149.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
++++++|+||||+|+||++++++|+++|++|+++.|+.....+.... .....+++++.+|+++.+++.++++
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 45678999999999999999999999999999999975432211111 1112458899999999998888765
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC--------CceEEEEecCccCCCCCCCCC
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG--------VEKFIHISALNADPNPPTYYI 146 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~~v~~Ss~~~~~~~~~~~~ 146 (303)
.+|++||++|.... ......+++|+.++.++++++.. .. ..++|++||...+.. .
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~ 160 (258)
T PRK06949 86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV-----L 160 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC-----C
Confidence 48999999996321 23446788999999998887642 11 248999999877642 2
Q ss_pred CCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233 147 SGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV 219 (303)
Q Consensus 147 ~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 219 (303)
....+|+.+|...+.+++.. ++++++++||.+++|....... ........+.++. ..+...+|+
T Consensus 161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~--------~~~~~p~~~ 231 (258)
T PRK06949 161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE-TEQGQKLVSMLPR--------KRVGKPEDL 231 (258)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHhcCCC--------CCCcCHHHH
Confidence 34578999999999887663 6899999999999875431100 0110001111221 246778999
Q ss_pred HHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233 220 AAAIVAACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 220 a~~~~~~~~~~--~~~g~~~~i~~~ 242 (303)
++++.+++... ...|....+.++
T Consensus 232 ~~~~~~l~~~~~~~~~G~~i~~dgg 256 (258)
T PRK06949 232 DGLLLLLAADESQFINGAIISADDG 256 (258)
T ss_pred HHHHHHHhChhhcCCCCcEEEeCCC
Confidence 99999998743 236766666544
No 171
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.81 E-value=2.7e-18 Score=145.49 Aligned_cols=213 Identities=14% Similarity=0.073 Sum_probs=148.6
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
.+++++++||||+|.||.+++++|+++|++|+++.|+..... ..+.. ...++.++.+|++|.+++.++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA--LGRKFHFITADLIQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH--cCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 356789999999999999999999999999999888643221 11111 12468899999999999888765
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|++||+||.... ...+..+++|+.++..+.+++.. .+ -.++|++||...+... .....|+
T Consensus 83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~~~~~Y~ 157 (251)
T PRK12481 83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-----IRVPSYT 157 (251)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC-----CCCcchH
Confidence 37999999996321 23446788999998888887643 22 2589999998776532 2235899
Q ss_pred HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|...+.+.+. .++++..++||.+-.+..................+|. ..+...+|+|++++++
T Consensus 158 asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------~~~~~peeva~~~~~L 229 (251)
T PRK12481 158 ASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA--------SRWGTPDDLAGPAIFL 229 (251)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence 999999988765 2789999999998765322110000000001112221 2357899999999999
Q ss_pred hcCC--CCCCcEEEEeCC
Q psy4233 227 CKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~~ 242 (303)
+... ...|+.+.+.++
T Consensus 230 ~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 230 SSSASDYVTGYTLAVDGG 247 (251)
T ss_pred hCccccCcCCceEEECCC
Confidence 9742 336777777665
No 172
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.81 E-value=3.2e-18 Score=144.52 Aligned_cols=212 Identities=15% Similarity=0.123 Sum_probs=144.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc-ccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY-DVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
++++++||||+|+||++++++|+++|++|+++.++... ..+..... ....++..+.+|+.|.+++.++++ +
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999886543222 11111111 112347788999999988877664 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ...+..+++|+.++..+.+++ ++.+..++|++||...... ......|+.+
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~y~~s 156 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----QFGQTNYSTA 156 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC-----CCCChhHHHH
Confidence 7999999996421 233467888999877766554 4556679999999765432 1345789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+.+.. +++++.++||.+.+|..... ............+ . ..+...+|++++++.++.
T Consensus 157 K~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~-------~-~~~~~~~~v~~~~~~l~~ 226 (246)
T PRK12938 157 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIP-------V-RRLGSPDEIGSIVAWLAS 226 (246)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc--ChHHHHHHHhcCC-------c-cCCcCHHHHHHHHHHHcC
Confidence 99888766552 68999999999987743211 1111111111111 1 346789999999999986
Q ss_pred CC--CCCCcEEEEeCCc
Q psy4233 229 DP--DAAGKIYQAVGPK 243 (303)
Q Consensus 229 ~~--~~~g~~~~i~~~~ 243 (303)
.+ ...|+.+.+.++.
T Consensus 227 ~~~~~~~g~~~~~~~g~ 243 (246)
T PRK12938 227 EESGFSTGADFSLNGGL 243 (246)
T ss_pred cccCCccCcEEEECCcc
Confidence 53 2367788887653
No 173
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2e-18 Score=147.19 Aligned_cols=213 Identities=15% Similarity=0.095 Sum_probs=147.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++++||||+|.||.+++++|+++|++|++++|+.....+..... ..++.++.+|++|.+++.++++ .+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL--GERARFIATDITDDAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999999999999999754322211111 1458899999999998887665 47
Q ss_pred CEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 89 NVVINLIGREFA-------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 89 D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
|++||++|.... +.....+++|+.++..+++++.. .+-.++|++||....... .....|+.+|..
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~~~~~Y~asKaa 156 (261)
T PRK08265 82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ-----TGRWLYPASKAA 156 (261)
T ss_pred CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----CCCchhHHHHHH
Confidence 999999986321 23346778899999888887653 233589999998764321 234689999999
Q ss_pred HHHHHHhh-------CCCEEEEeecceeeCCCchhh-HHHHHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLR-YYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
.+.+.+.. +++++.++||.+..+...... .-...... .....+ . ..+...+|+|++++.++..
T Consensus 157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p~dva~~~~~l~s~ 228 (261)
T PRK08265 157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHL-------L-GRVGDPEEVAQVVAFLCSD 228 (261)
T ss_pred HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCC-------C-CCccCHHHHHHHHHHHcCc
Confidence 99887763 689999999988765321100 00000000 000111 1 2357899999999999975
Q ss_pred C--CCCCcEEEEeCCc
Q psy4233 230 P--DAAGKIYQAVGPK 243 (303)
Q Consensus 230 ~--~~~g~~~~i~~~~ 243 (303)
. ...|+.+.+.++.
T Consensus 229 ~~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 229 AASFVTGADYAVDGGY 244 (261)
T ss_pred cccCccCcEEEECCCe
Confidence 3 2368888887764
No 174
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.81 E-value=5.3e-18 Score=145.85 Aligned_cols=216 Identities=13% Similarity=0.110 Sum_probs=149.0
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
.+.+++++||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.|.+++..+++
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356789999999999999999999999999999999753322211111 112358889999999988877654
Q ss_pred ccCEEEEccccCcc-----------------------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCC
Q psy4233 87 YSNVVINLIGREFA-----------------------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADP 139 (303)
Q Consensus 87 ~~D~vi~~a~~~~~-----------------------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~ 139 (303)
++|++||++|.... ......+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 166 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT 166 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence 58999999985321 123356788888887666554 344456899999998875
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH-----HHHHHHhhhcceeeecCCC
Q psy4233 140 NPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY-----YGHMWRHVFRKLAVYKKGE 207 (303)
Q Consensus 140 ~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 207 (303)
. ......|+.+|...+.+++.. ++++..++||.+..|....... ............|
T Consensus 167 ~-----~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p------ 235 (278)
T PRK08277 167 P-----LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTP------ 235 (278)
T ss_pred C-----CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCC------
Confidence 2 234568999999999888763 6899999999998874321000 0000000001111
Q ss_pred ceeeCceeHHHHHHHHHHHhcC-CC--CCCcEEEEeCCc
Q psy4233 208 ETIKQPVYVGDVAAAIVAACKD-PD--AAGKIYQAVGPK 243 (303)
Q Consensus 208 ~~~~~~i~~~Dva~~~~~~~~~-~~--~~g~~~~i~~~~ 243 (303)
. ..+...+|+|+++++++.. .. ..|+.+.+.+|.
T Consensus 236 -~-~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~ 272 (278)
T PRK08277 236 -M-GRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF 272 (278)
T ss_pred -c-cCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence 1 2467899999999999875 22 368888887663
No 175
>PRK06196 oxidoreductase; Provisional
Probab=99.81 E-value=3.6e-18 Score=149.53 Aligned_cols=203 Identities=15% Similarity=0.041 Sum_probs=138.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++|+||||+|+||.+++++|+++|++|++++|+.....+.... ..+++++.+|++|.+++.++++ ++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~---l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG---IDGVEVVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hhhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4568999999999999999999999999999999975432221111 1348899999999998887663 48
Q ss_pred CEEEEccccCcc------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCC--C-----CCCCCCCCc
Q psy4233 89 NVVINLIGREFA------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNP--P-----TYYISGGSQ 151 (303)
Q Consensus 89 D~vi~~a~~~~~------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~--~-----~~~~~~~~~ 151 (303)
|+|||+||.... ...+..+++|+.++..++++ +++.+..++|++||.+..... . ..+..+...
T Consensus 101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~ 180 (315)
T PRK06196 101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLA 180 (315)
T ss_pred CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHH
Confidence 999999996321 22346788999986666654 445555699999997653211 0 122334467
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHH----HHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGH----MWRHVFRKLAVYKKGEETIKQPVYVGDVA 220 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 220 (303)
|+.+|...+.+.+.. ++++++++||.+.+|.......-.. ++ .....++ . ..+...+|+|
T Consensus 181 Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~~~~~~~-----~--~~~~~~~~~a 251 (315)
T PRK06196 181 YGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWV--DEHGNPI-----D--PGFKTPAQGA 251 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhh--hhhhhhh-----h--hhcCCHhHHH
Confidence 999999998876543 6899999999999885332111000 00 0000111 0 0246789999
Q ss_pred HHHHHHhcCC
Q psy4233 221 AAIVAACKDP 230 (303)
Q Consensus 221 ~~~~~~~~~~ 230 (303)
..++.++..+
T Consensus 252 ~~~~~l~~~~ 261 (315)
T PRK06196 252 ATQVWAATSP 261 (315)
T ss_pred HHHHHHhcCC
Confidence 9999998654
No 176
>PRK08017 oxidoreductase; Provisional
Probab=99.81 E-value=1.1e-18 Score=148.09 Aligned_cols=197 Identities=12% Similarity=0.024 Sum_probs=137.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--------ccC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--------YSN 89 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~D 89 (303)
+++|+||||+|+||+++++.|+++|++|++++|+.... +.... .+++.+.+|+.|.+++.++++ .+|
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV-ARMNS----LGFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh-HHHHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 35899999999999999999999999999999975332 22111 247889999999887766543 368
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHH----HHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARL----ARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
.+||++|.... ...+..++.|+.++.++ ++++++.+.+++|++||...... ......|+.+|.
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~~Y~~sK~ 151 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS-----TPGRGAYAASKY 151 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC-----CCCccHHHHHHH
Confidence 99999985321 12335778888887765 66666777789999999755432 134578999999
Q ss_pred HHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 158 QGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 158 ~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
..|.+.+. .++++++++||.+..+....... .....+....+... +.+++.+|+|+++..+++++
T Consensus 152 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~~~ 223 (256)
T PRK08017 152 ALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQ-------TQSDKPVENPGIAA-RFTLGPEAVVPKLRHALESP 223 (256)
T ss_pred HHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccc-------hhhccchhhhHHHh-hcCCCHHHHHHHHHHHHhCC
Confidence 99987653 37899999998876442211100 01111112222222 45799999999999999865
Q ss_pred CC
Q psy4233 231 DA 232 (303)
Q Consensus 231 ~~ 232 (303)
..
T Consensus 224 ~~ 225 (256)
T PRK08017 224 KP 225 (256)
T ss_pred CC
Confidence 54
No 177
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2.7e-18 Score=145.67 Aligned_cols=215 Identities=12% Similarity=0.010 Sum_probs=149.4
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
++++++++||||+|.||.+++++|+++|++|+++.|+.....+..... ....++..+.+|++|++++.++++
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 456789999999999999999999999999999998754322111111 112458889999999998877664
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
.+|++||++|.... ......+++|+.++..+++++.. .+ -.++|++||....... .......|+
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~~~Y~ 162 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN---VPQQVSHYC 162 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC---CCCCccchH
Confidence 58999999986322 12335678999999999888743 22 2379999887653210 001236899
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|...+.+.+.. ++++..++||.+-.|........... .....+. ..+...+|+|++++++
T Consensus 163 asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~---~~~~~~~--------~r~~~p~~va~~~~~L 231 (253)
T PRK05867 163 ASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPL---WEPKIPL--------GRLGRPEELAGLYLYL 231 (253)
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHH---HHhcCCC--------CCCcCHHHHHHHHHHH
Confidence 9999999988763 68999999999977643211111111 1112221 2367899999999999
Q ss_pred hcCC--CCCCcEEEEeCCc
Q psy4233 227 CKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~~~ 243 (303)
+... ...|+.+.+.+|.
T Consensus 232 ~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 232 ASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred cCcccCCcCCCeEEECCCc
Confidence 9743 2368888887764
No 178
>PRK08264 short chain dehydrogenase; Validated
Probab=99.81 E-value=3e-18 Score=143.92 Aligned_cols=182 Identities=15% Similarity=0.069 Sum_probs=138.7
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cC
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SN 89 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D 89 (303)
+.+.+++|+||||+|+||+++++.|+++|+ +|++++|+.....+ ...+++++.+|+.|.+++.++++. +|
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~id 75 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEAASDVT 75 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence 345677999999999999999999999998 99999997543221 124689999999999999888764 79
Q ss_pred EEEEcccc-Ccc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 90 VVINLIGR-EFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 90 ~vi~~a~~-~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
+|||++|. ... ......+++|+.++.++++++. ..+..++|++||...+.. ..+...|+.+|
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----~~~~~~y~~sK 150 (238)
T PRK08264 76 ILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN-----FPNLGTYSASK 150 (238)
T ss_pred EEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC-----CCCchHhHHHH
Confidence 99999997 211 2234567889999999998865 345668999999877652 23456899999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
..++.+.+.. +++++++||+.+.++... ... ...+..+|+++.++..+..
T Consensus 151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~--------------~~~---------~~~~~~~~~a~~~~~~~~~ 207 (238)
T PRK08264 151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA--------------GLD---------APKASPADVARQILDALEA 207 (238)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc--------------cCC---------cCCCCHHHHHHHHHHHHhC
Confidence 9999877653 689999999988765311 000 1247788999999988874
No 179
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.80 E-value=2.2e-18 Score=139.50 Aligned_cols=202 Identities=20% Similarity=0.185 Sum_probs=143.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh-------ccc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI-------KYS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~ 88 (303)
...|.++|||||+.||.++++.|.+.|++|++..|+.+...+.....+. ..+..+..|++|.+++.+++ .++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence 3467899999999999999999999999999999986533332222222 45889999999998866544 348
Q ss_pred CEEEEccccC--------ccccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 89 NVVINLIGRE--------FATKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
|++||+||.. ..+.+..++++|+.+..+..+++- +.+..++|.+||...... ....+.|+.+|
T Consensus 83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~-----y~~~~vY~ATK 157 (246)
T COG4221 83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP-----YPGGAVYGATK 157 (246)
T ss_pred cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc-----CCCCccchhhH
Confidence 9999999962 224566899999999999888773 334459999999876431 13347899999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
+.+.++.... +++++.+-||.+-..-.+..+.-.. ..+.-.++ .. ..++..+|+|+++++++.+
T Consensus 158 ~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~----~~~~~~~y----~~-~~~l~p~dIA~~V~~~~~~ 228 (246)
T COG4221 158 AAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGD----DERADKVY----KG-GTALTPEDIAEAVLFAATQ 228 (246)
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCch----hhhHHHHh----cc-CCCCCHHHHHHHHHHHHhC
Confidence 9998876552 6889999998885321110000000 00000100 11 4679999999999999998
Q ss_pred CCC
Q psy4233 230 PDA 232 (303)
Q Consensus 230 ~~~ 232 (303)
|..
T Consensus 229 P~~ 231 (246)
T COG4221 229 PQH 231 (246)
T ss_pred CCc
Confidence 764
No 180
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.80 E-value=4.2e-18 Score=145.30 Aligned_cols=218 Identities=10% Similarity=0.018 Sum_probs=148.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-C-CCCceEEEecCCCCHHHHHHHhc------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-G-DLGQVLFQPYHPRNDDEIRKAIK------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~-~~~~~~~~~~Dl~d~~~~~~~~~------~ 87 (303)
+++++++||||+|.||.+++++|+++|++|++++|+..+..+..... . ...+++++.+|++|++++.++++ .
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 56789999999999999999999999999999999754322111111 0 12458899999999998887765 3
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|++||++|.... +.....+++|+.+...++++ +++.+..++|++||...... ......|+.+
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~-----~~~~~~y~as 160 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP-----IPNIALSNVV 160 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC-----CCcchhhHHH
Confidence 8999999986321 23345677887766555544 44555569999999876542 1223579999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhH---------HHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRY---------YGHMWRHVFRKLAVYKKGEETIKQPVYVGDV 219 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 219 (303)
|...+.+.+.. |+++..+.||.+..+....... ...........+|. ..+...+|+
T Consensus 161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~dv 232 (263)
T PRK08339 161 RISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL--------GRLGEPEEI 232 (263)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc--------ccCcCHHHH
Confidence 99999877763 6889999999887552110000 00000001111221 236789999
Q ss_pred HHHHHHHhcCC--CCCCcEEEEeCCcccC
Q psy4233 220 AAAIVAACKDP--DAAGKIYQAVGPKRYL 246 (303)
Q Consensus 220 a~~~~~~~~~~--~~~g~~~~i~~~~~~s 246 (303)
|+++++++..+ ...|+.+.+.++...|
T Consensus 233 a~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 233 GYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred HHHHHHHhcchhcCccCceEEECCCcccc
Confidence 99999998743 2368888887776554
No 181
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.80 E-value=3.5e-18 Score=145.30 Aligned_cols=218 Identities=13% Similarity=0.024 Sum_probs=144.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch----h-cCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR----L-CGDLGQVLFQPYHPRNDDEIRKAIK---- 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~-~~~~~~~~~~~~Dl~d~~~~~~~~~---- 86 (303)
+++++++||||+|+||.++++.|+++|++|+++.++.....+... . .....+++++++|++|++++.+++.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 456899999999999999999999999997777665332211111 0 0111358899999999999887665
Q ss_pred ---ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEe-cC-ccCCCCCCCCCCCCCc
Q psy4233 87 ---YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHIS-AL-NADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 ---~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~S-s~-~~~~~~~~~~~~~~~~ 151 (303)
++|++||+||.... ...+..+++|+.++..+++++... ...++++++ |. +.+. .....
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-------~~~~~ 158 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-------PFYSA 158 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-------CCccc
Confidence 47999999996211 223467889999999999988643 123566653 33 3232 23478
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|+.+|..+|.+.+.. +++++.++||.+.++............. .. . ......... ..+.+.+|+|+++.
T Consensus 159 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~-~~-~-~~~~~~~~~-~~~~~~~dva~~~~ 234 (257)
T PRK12744 159 YAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAY-HK-T-AAALSPFSK-TGLTDIEDIVPFIR 234 (257)
T ss_pred chhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhc-cc-c-ccccccccc-CCCCCHHHHHHHHH
Confidence 999999999988774 5899999999998763211000000000 00 0 000000111 24789999999999
Q ss_pred HHhcCCC-CCCcEEEEeCCcc
Q psy4233 225 AACKDPD-AAGKIYQAVGPKR 244 (303)
Q Consensus 225 ~~~~~~~-~~g~~~~i~~~~~ 244 (303)
.+++... ..|+++++.++..
T Consensus 235 ~l~~~~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 235 FLVTDGWWITGQTILINGGYT 255 (257)
T ss_pred HhhcccceeecceEeecCCcc
Confidence 9998432 2588898887643
No 182
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.80 E-value=9.2e-18 Score=141.86 Aligned_cols=212 Identities=14% Similarity=0.075 Sum_probs=140.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++|+||||+|+||+.+++.|+++|++|+++.+++....+... ......++.++.+|+.|.+++.++++ .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 5799999999999999999999999999877654433222111 11112468899999999988876654 48
Q ss_pred CEEEEccccCccc---------cchhhhhhhcchHHHHHHHHH-hcCC------ceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 89 NVVINLIGREFAT---------KNFTIADANVEIPARLARLSK-EMGV------EKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 89 D~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~~~~-~~~~------~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
|+|||++|..... .....+.+|+.++..+++++. .... .++|++||........ .....|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----~~~~~Y 157 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP----NEYVDY 157 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC----CCCccc
Confidence 9999999863221 113457899999888875443 2221 3699999876543211 122579
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+.+|...+.+++.. ++++++++||.+..|........ ..........+. .-+...+|+|++++.
T Consensus 158 ~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~e~va~~~~~ 228 (248)
T PRK06947 158 AGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP-GRAARLGAQTPL--------GRAGEADEVAETIVW 228 (248)
T ss_pred HhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH-HHHHHHhhcCCC--------CCCcCHHHHHHHHHH
Confidence 99999999776552 68999999999988742210000 000001111111 124788999999999
Q ss_pred HhcCCC--CCCcEEEEeCC
Q psy4233 226 ACKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 226 ~~~~~~--~~g~~~~i~~~ 242 (303)
++.++. ..|+.+.+.++
T Consensus 229 l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 229 LLSDAASYVTGALLDVGGG 247 (248)
T ss_pred HcCccccCcCCceEeeCCC
Confidence 987643 36777777554
No 183
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.80 E-value=6.7e-18 Score=143.19 Aligned_cols=215 Identities=16% Similarity=0.107 Sum_probs=148.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKY------- 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~------- 87 (303)
+++++++||||+|+||.+++++|+++|++|+++.|+.....+.... .....+++++.+|++|.+++.+++++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4568999999999999999999999999999999975432211111 11124588999999999888876653
Q ss_pred cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|+|||++|.... +.....+++|+.++..+++++ .+.+..++|++||...+.. ......|+.
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~-----~~~~~~Y~~ 159 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA-----APKMSIYAA 159 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC-----CCCCchhHH
Confidence 5999999986321 123456789999887766654 3344568999999887653 234578999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
+|...+.+.+.. ++++..+.||.+-.+..... ..............+. ..+...+|+|+.++++
T Consensus 160 sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~p~~ia~~~~~l 231 (253)
T PRK06172 160 SKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV--------GRIGKVEEVASAVLYL 231 (253)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC--------CCccCHHHHHHHHHHH
Confidence 999999887663 58889999998866532211 0001111101111111 2357899999999999
Q ss_pred hcCC--CCCCcEEEEeCCc
Q psy4233 227 CKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~~~ 243 (303)
+.+. ...|+.+.+.++.
T Consensus 232 ~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 232 CSDGASFTTGHALMVDGGA 250 (253)
T ss_pred hCccccCcCCcEEEECCCc
Confidence 9753 3478888887764
No 184
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.80 E-value=1.2e-17 Score=142.72 Aligned_cols=218 Identities=15% Similarity=0.072 Sum_probs=151.1
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKY----- 87 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~----- 87 (303)
+.+.+++++||||+|.||.+++++|+++|++|+++.|+.....+..... ....++.++.+|++|.+++.+++..
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 3456789999999999999999999999999999988754332221111 1123588999999999988877643
Q ss_pred --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
+|++||++|.... +.....+++|+.++..+.+++. +.+..+||++||...... ......|+
T Consensus 86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~ 160 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG-----RETVSAYA 160 (265)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC-----CCCCccHH
Confidence 7999999996322 2234567789988887777664 345569999999754321 13457899
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHH------HHHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYY------GHMWRHVFRKLAVYKKGEETIKQPVYVGDVA 220 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 220 (303)
.+|...+.+.+.. ++.++.++||.+..+........ ...........+ . ..+...+|+|
T Consensus 161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva 232 (265)
T PRK07097 161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP-------A-ARWGDPEDLA 232 (265)
T ss_pred HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC-------c-cCCcCHHHHH
Confidence 9999999888764 68999999999988743221100 000000000111 1 2367889999
Q ss_pred HHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233 221 AAIVAACKDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 221 ~~~~~~~~~~--~~~g~~~~i~~~~~ 244 (303)
..++.++... ...|+.+.+.++..
T Consensus 233 ~~~~~l~~~~~~~~~g~~~~~~gg~~ 258 (265)
T PRK07097 233 GPAVFLASDASNFVNGHILYVDGGIL 258 (265)
T ss_pred HHHHHHhCcccCCCCCCEEEECCCce
Confidence 9999999752 34677887776643
No 185
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.80 E-value=7.5e-18 Score=143.71 Aligned_cols=215 Identities=13% Similarity=0.051 Sum_probs=147.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++++||||+|+||+++++.|+++|++|++++|+.. ..+... ......++.++.+|+.|.+++.++++ .
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999999998753 111111 11112357889999999998887765 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ...+..+++|+.++..+++++.. .+..++|++||...... +......|+.+
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~~Y~~s 158 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----ADPGETAYALT 158 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc----CCCCcchHHHH
Confidence 7999999996322 12234688999999998887653 34568999998765321 11234689999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhh------HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLR------YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
|...+.+++.. +++++.++||.+.+|...... .....+.......| . ..+...+|+|++
T Consensus 159 K~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~~~~~~~~va~~ 230 (263)
T PRK08226 159 KAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP-------L-RRLADPLEVGEL 230 (263)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC-------C-CCCCCHHHHHHH
Confidence 99999888763 588999999999876321110 00011111111111 1 235799999999
Q ss_pred HHHHhcCC--CCCCcEEEEeCCc
Q psy4233 223 IVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 223 ~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
+..++... ...|+.+.+.++.
T Consensus 231 ~~~l~~~~~~~~~g~~i~~dgg~ 253 (263)
T PRK08226 231 AAFLASDESSYLTGTQNVIDGGS 253 (263)
T ss_pred HHHHcCchhcCCcCceEeECCCc
Confidence 99988643 3467777776663
No 186
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.3e-17 Score=141.68 Aligned_cols=210 Identities=12% Similarity=0.072 Sum_probs=143.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++|+||||+|+||.+++++|+++|++|++++|+........... +.+++.+|+.|.+++.++++ ++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----GGLFVPTDVTDEDAVNALFDTAAETYGSV 80 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 56789999999999999999999999999999999754322111111 13678999999998887775 47
Q ss_pred CEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCc-cCCCCCCCCCCCCCchh
Q psy4233 89 NVVINLIGREFA----------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALN-ADPNPPTYYISGGSQFY 153 (303)
Q Consensus 89 D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~-~~~~~~~~~~~~~~~y~ 153 (303)
|+|||++|.... ...+..+++|+.++..+++++. +.+..++|++||.. .++.. .....|+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~-----~~~~~Y~ 155 (255)
T PRK06057 81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA-----TSQISYT 155 (255)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC-----CCCcchH
Confidence 999999986321 1134677889998887777653 34455899998864 44421 2346799
Q ss_pred HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchh-h-HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFL-R-YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
.+|+..+.+.+. .+++++.++||.+.+|..... . ......+ ....++ . ..+.+.+|+|+++.
T Consensus 156 ~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~-------~-~~~~~~~~~a~~~~ 226 (255)
T PRK06057 156 ASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAAR-RLVHVP-------M-GRFAEPEEIAAAVA 226 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHH-HHhcCC-------C-CCCcCHHHHHHHHH
Confidence 999877766653 269999999999988743211 0 0000000 011111 1 24789999999999
Q ss_pred HHhcCC--CCCCcEEEEeCCc
Q psy4233 225 AACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 225 ~~~~~~--~~~g~~~~i~~~~ 243 (303)
.++... ...|+.+.+.++.
T Consensus 227 ~l~~~~~~~~~g~~~~~~~g~ 247 (255)
T PRK06057 227 FLASDDASFITASTFLVDGGI 247 (255)
T ss_pred HHhCccccCccCcEEEECCCe
Confidence 888653 2357777776653
No 187
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.79 E-value=5.2e-18 Score=144.82 Aligned_cols=216 Identities=14% Similarity=0.077 Sum_probs=147.8
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY----- 87 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 87 (303)
+.+++++++||||+|+||.+++++|+++|++|++++|+.....+... ......++.++.+|++|++++.+++++
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 44567899999999999999999999999999999997543221111 111123578899999999988876643
Q ss_pred --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|++||++|.... ......+++|+.++.++++++... .-.++|++||...... ......|+.
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-----~~~~~~Y~a 159 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-----MPMQAHVCA 159 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----CCCccHHHH
Confidence 6999999975221 223456789999999999887642 1258999999866431 133468999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHH-HHHHh-hhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYG-HMWRH-VFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+|...+.+++.. +++++.++|+.+.+.... ..... ..... .....+ . ..+...+|+|++++.
T Consensus 160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~-~~~~~~~~~~~~~~~~~~-------~-~~~~~~~dva~~~~~ 230 (264)
T PRK07576 160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM-ARLAPSPELQAAVAQSVP-------L-KRNGTKQDIANAALF 230 (264)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH-hhcccCHHHHHHHHhcCC-------C-CCCCCHHHHHHHHHH
Confidence 999999988763 578899999988642110 00000 00000 111112 1 346789999999999
Q ss_pred HhcCCC--CCCcEEEEeCCc
Q psy4233 226 ACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 226 ~~~~~~--~~g~~~~i~~~~ 243 (303)
++.... ..|..+.+.++.
T Consensus 231 l~~~~~~~~~G~~~~~~gg~ 250 (264)
T PRK07576 231 LASDMASYITGVVLPVDGGW 250 (264)
T ss_pred HcChhhcCccCCEEEECCCc
Confidence 997532 367777777764
No 188
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.79 E-value=1.5e-17 Score=139.62 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=142.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------S 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~ 88 (303)
+++++|+||||+|+||+++++.|+++|++|++++|++..............+++++.+|+.|.+++.+++++ +
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999997543222111111223588999999999888776543 5
Q ss_pred CEEEEccccCcc------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233 89 NVVINLIGREFA------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE 160 (303)
Q Consensus 89 D~vi~~a~~~~~------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e 160 (303)
|.+||+++.... ......++.|+.+...+++.+... .-.++|++||...... +..+...|+.+|...+
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----~~~~~~~Y~~sK~~~~ 158 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----ASPDQLSYAVAKAGLA 158 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----CCCCchHHHHHHHHHH
Confidence 999999985322 112345678888877777776542 1247999998765321 1133467999999888
Q ss_pred HHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC--
Q psy4233 161 KEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-- 231 (303)
Q Consensus 161 ~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-- 231 (303)
.+++. .+++++++||++++++...... + . .... .. ..++..+|++++++.++..+.
T Consensus 159 ~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~-----~--~--~~~~-----~~-~~~~~~~~va~~~~~~~~~~~~~ 223 (238)
T PRK05786 159 KAVEILASELLGRGIRVNGIAPTTISGDFEPERN-----W--K--KLRK-----LG-DDMAPPEDFAKVIIWLLTDEADW 223 (238)
T ss_pred HHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh-----h--h--hhcc-----cc-CCCCCHHHHHHHHHHHhcccccC
Confidence 76654 2799999999999987432110 0 0 0110 01 235788999999999997533
Q ss_pred CCCcEEEEeCC
Q psy4233 232 AAGKIYQAVGP 242 (303)
Q Consensus 232 ~~g~~~~i~~~ 242 (303)
..|..+.+.++
T Consensus 224 ~~g~~~~~~~~ 234 (238)
T PRK05786 224 VDGVVIPVDGG 234 (238)
T ss_pred ccCCEEEECCc
Confidence 35767777554
No 189
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.79 E-value=1.6e-17 Score=140.89 Aligned_cols=213 Identities=14% Similarity=0.076 Sum_probs=148.6
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
.+.+++++||||+|.||.+++++|+++|++|++++|..... .+.+.. ...++..+++|++|.+++.++++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA--LGRRFLSLTADLRKIDGIPALLERAVAEFG 84 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh--cCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 35678999999999999999999999999999887754321 111111 12358889999999988887765
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|++||+||.... ......+++|+.++.++++++... + -.++|++||...+... .....|+
T Consensus 85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~ 159 (253)
T PRK08993 85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG-----IRVPSYT 159 (253)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC-----CCCcchH
Confidence 47999999986321 234578899999999988887432 2 2489999998776532 2235899
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|...+.+.+.. ++++..++||.+-.+.......-....+.....+|. .-+...+|+|+.++++
T Consensus 160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~eva~~~~~l 231 (253)
T PRK08993 160 ASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPA--------GRWGLPSDLMGPVVFL 231 (253)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence 9999999887653 688999999999866322110000000001112221 2367889999999999
Q ss_pred hcCC--CCCCcEEEEeCC
Q psy4233 227 CKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~~ 242 (303)
+... ...|+.+.+.++
T Consensus 232 ~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 232 ASSASDYINGYTIAVDGG 249 (253)
T ss_pred hCccccCccCcEEEECCC
Confidence 9753 236777776554
No 190
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.79 E-value=3.6e-18 Score=145.44 Aligned_cols=195 Identities=14% Similarity=-0.027 Sum_probs=136.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--------ccC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--------YSN 89 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~D 89 (303)
|++++||||||+||++++++|+++|++|++++|+.....+ +.......+++++.+|++|.+++.++++ ++|
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAA-LAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 4789999999999999999999999999999997543222 1111112468999999999988887654 369
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+|||+||.... ...+..+++|+.++.++++++. ..+..++|++||....... .....|+.+|.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~~~Y~~sKa 154 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ-----PGLAVYSATKF 154 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC-----CCchhhHHHHH
Confidence 99999996322 2234678999999999988874 3445689999997554321 23468999999
Q ss_pred HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
..+.+.+.. +++++.++||.+..+....... ... . ... ... .-.+..+|+|++++.+++.+
T Consensus 155 a~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~~--~-~~~------~~~-~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 155 AVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN--EVD--A-GST------KRL-GVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc--hhh--h-hhH------hhc-cCCCCHHHHHHHHHHHHhCC
Confidence 988877663 6899999999887543221000 000 0 000 011 12367799999999999743
No 191
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.79 E-value=6.4e-18 Score=143.92 Aligned_cols=217 Identities=13% Similarity=0.056 Sum_probs=142.3
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcC--CCCceEEEecCCCCHHHHHHHhc----
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCG--DLGQVLFQPYHPRNDDEIRKAIK---- 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~---- 86 (303)
.++++++++||||++.||.+++++|+++|++|+++.|+..+..+... ... ...++.++.+|++|++++.++++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 34678899999999999999999999999999888765443322211 111 12358899999999988887664
Q ss_pred ---ccCEEEEccccCcc--------------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCC
Q psy4233 87 ---YSNVVINLIGREFA--------------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYY 145 (303)
Q Consensus 87 ---~~D~vi~~a~~~~~--------------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~ 145 (303)
++|++||+||.... ......+++|+.+...+.+++ ++.+..+||++||......
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----- 158 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY----- 158 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC-----
Confidence 37999999974210 112245666776655554444 3344469999999765431
Q ss_pred CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHH
Q psy4233 146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGD 218 (303)
Q Consensus 146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 218 (303)
......|+.+|+.++.+++.. ++++..+.||.+-.+...................|. ..+...+|
T Consensus 159 ~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--------~r~~~p~~ 230 (260)
T PRK08416 159 IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL--------NRMGQPED 230 (260)
T ss_pred CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC--------CCCCCHHH
Confidence 123468999999999988763 688999999888654211100001111001111111 23678999
Q ss_pred HHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233 219 VAAAIVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 219 va~~~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
+|.+++.++... ...|+.+.+.++.
T Consensus 231 va~~~~~l~~~~~~~~~G~~i~vdgg~ 257 (260)
T PRK08416 231 LAGACLFLCSEKASWLTGQTIVVDGGT 257 (260)
T ss_pred HHHHHHHHcChhhhcccCcEEEEcCCe
Confidence 999999998743 2367777776654
No 192
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.79 E-value=7.9e-18 Score=143.30 Aligned_cols=215 Identities=13% Similarity=0.074 Sum_probs=149.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
+++++|+||||+|+||..++++|+++|++ |+++.|+........... ....++.++.+|+++++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999988 999988743322111111 112457889999999998887664
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|++||++|.... ......+++|+.++.++++++.. .+ ..++|++||...+... .....|+
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----~~~~~Y~ 158 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-----PFLAAYC 158 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----CCcchhH
Confidence 47999999986321 12235688999999999887743 22 2479999998876532 2346899
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-h----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-R----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA 221 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 221 (303)
.+|...|.+.+.. ++.++.++|+.++++..... . ....+........+ . ..+++.+|+|+
T Consensus 159 ~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~a~ 230 (260)
T PRK06198 159 ASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQP-------F-GRLLDPDEVAR 230 (260)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCC-------c-cCCcCHHHHHH
Confidence 9999999988753 57889999999998753211 0 00111111111111 1 34689999999
Q ss_pred HHHHHhcCCC--CCCcEEEEeCCc
Q psy4233 222 AIVAACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 222 ~~~~~~~~~~--~~g~~~~i~~~~ 243 (303)
+++.++.... ..|+.+.+.++.
T Consensus 231 ~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 231 AVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred HHHHHcChhhCCccCceEeECCcc
Confidence 9999986432 368888887654
No 193
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.79 E-value=8.9e-18 Score=145.39 Aligned_cols=194 Identities=14% Similarity=0.058 Sum_probs=138.8
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+.+++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|+.|.+++.++++
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4456789999999999999999999999999999999753321111111 112357889999999998888776
Q ss_pred -ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 87 -YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 -~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
++|++||+||.... ......+++|+.++.++++++ ++.+..++|++||.+++... . .....
T Consensus 116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--~--p~~~~ 191 (293)
T PRK05866 116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA--S--PLFSV 191 (293)
T ss_pred CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--C--CCcch
Confidence 58999999986321 112356788988887777765 35566799999998765421 1 23468
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|+.+|+..+.+++.. +++++.++||.+-.+.... .... .. ...++.+++|+.++
T Consensus 192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~-----------~~~~-------~~-~~~~~pe~vA~~~~ 252 (293)
T PRK05866 192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP-----------TKAY-------DG-LPALTADEAAEWMV 252 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc-----------cccc-------cC-CCCCCHHHHHHHHH
Confidence 999999998877653 6889999998776553210 0000 01 22478999999999
Q ss_pred HHhcCC
Q psy4233 225 AACKDP 230 (303)
Q Consensus 225 ~~~~~~ 230 (303)
.+++++
T Consensus 253 ~~~~~~ 258 (293)
T PRK05866 253 TAARTR 258 (293)
T ss_pred HHHhcC
Confidence 999853
No 194
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.79 E-value=5.8e-18 Score=142.72 Aligned_cols=188 Identities=13% Similarity=0.030 Sum_probs=137.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCCHHHHHHHhcc----cCEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRNDDEIRKAIKY----SNVV 91 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----~D~v 91 (303)
||+++||||+|+||.++++.|+++|++|++++|+.....+..... ....+++++++|+.|.+++.+++++ +|++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 579999999999999999999999999999999764332211110 1124689999999999988877654 6999
Q ss_pred EEccccCccc--------cchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233 92 INLIGREFAT--------KNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG 159 (303)
Q Consensus 92 i~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~ 159 (303)
||++|..... .....+++|+.++.++++++.. .+..++|++||....... .....|+.+|...
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~ 155 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR-----ASNYVYGSAKAAL 155 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC-----CCCcccHHHHHHH
Confidence 9999853221 1235678999999998887653 456799999998654321 2346799999998
Q ss_pred HHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 160 EKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 160 e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
+.+.+.. ++++..++|+.++++... . ...+ . ...++.+|+|++++..+.++
T Consensus 156 ~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~-----------~-~~~~------~--~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 156 TAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA-----------G-LKLP------G--PLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred HHHHHHHHHHhhccCcEEEEEecCcccChhhh-----------c-cCCC------c--cccCCHHHHHHHHHHHHhCC
Confidence 8877653 689999999999876211 0 0111 0 12578999999999999854
No 195
>PRK08589 short chain dehydrogenase; Validated
Probab=99.79 E-value=1.5e-17 Score=142.56 Aligned_cols=213 Identities=15% Similarity=0.060 Sum_probs=146.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++++||||+|.||.+++++|+++|++|+++.|+ ....+..... ....++.++.+|++|.+++..+++ .
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999997 3322211111 112358899999999988877654 3
Q ss_pred cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 88 SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 88 ~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
+|++||+||.... ...+..+++|+.++..+++++. +.+ .++|++||...+... .....|+.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----~~~~~Y~a 156 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD-----LYRSGYNA 156 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC-----CCCchHHH
Confidence 7999999986321 1123566788888877766653 334 589999998776421 23468999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-h----HHHHHHHh-hhcceeeecCCCceeeCceeHHHHHH
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-R----YYGHMWRH-VFRKLAVYKKGEETIKQPVYVGDVAA 221 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~----~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~ 221 (303)
+|...+.+++.. +++++.+.||.+..+..... . ........ .....| . ..+...+|+|+
T Consensus 157 sKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va~ 228 (272)
T PRK08589 157 AKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP-------L-GRLGKPEEVAK 228 (272)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC-------C-CCCcCHHHHHH
Confidence 999999988763 68999999999876632210 0 00000000 000111 1 23578999999
Q ss_pred HHHHHhcCC--CCCCcEEEEeCCc
Q psy4233 222 AIVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 222 ~~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
+++.++... ...|+.+.+.++.
T Consensus 229 ~~~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 229 LVVFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred HHHHHcCchhcCcCCCEEEECCCc
Confidence 999998743 3367788887664
No 196
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.78 E-value=3.2e-18 Score=150.32 Aligned_cols=166 Identities=13% Similarity=0.036 Sum_probs=120.6
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKY------ 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------ 87 (303)
++++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....+++++.+|++|.+++.++++.
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 346789999999999999999999999999999999754322211111 1123588999999999988877653
Q ss_pred -cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh----cC--CceEEEEecCccCCC----C------
Q psy4233 88 -SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE----MG--VEKFIHISALNADPN----P------ 141 (303)
Q Consensus 88 -~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~Ss~~~~~~----~------ 141 (303)
+|+|||+||.... +..+..+++|+.++.++++++.. .+ ..++|++||...+.. .
T Consensus 83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~ 162 (322)
T PRK07453 83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP 162 (322)
T ss_pred CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence 8999999995321 22346789999999988887753 22 359999999765321 0
Q ss_pred --------------------CCCCCCCCCchhHHHHHHHHHHHh----h----CCCEEEEeecceee
Q psy4233 142 --------------------PTYYISGGSQFYRTKYQGEKEVLR----E----FPEATIFRPSDMYG 180 (303)
Q Consensus 142 --------------------~~~~~~~~~~y~~~K~~~e~~~~~----~----~~~~~ilrp~~~~G 180 (303)
+..+..+...|+.+|...+.+.+. + ++.++.++||++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 229 (322)
T PRK07453 163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD 229 (322)
T ss_pred cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 012334567899999877554433 2 58899999999985
No 197
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.6e-17 Score=140.93 Aligned_cols=187 Identities=16% Similarity=0.151 Sum_probs=133.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccc----cchhcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVR----DLRLCGDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
+.++|+||||+|.||++++++|+++| ++|++++|++....+ .++.. ...+++++.+|+.|.+++.+.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA-GASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc-CCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 35789999999999999999999995 899999998654222 11111 12368999999999887655443
Q ss_pred -ccCEEEEccccCccc-----cc---hhhhhhhcchHHH----HHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 -YSNVVINLIGREFAT-----KN---FTIADANVEIPAR----LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 -~~D~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~----l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
++|++||++|..... .. ...+++|+.++.. ++.++++.+..++|++||...+.. ......|+
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~-----~~~~~~Y~ 160 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV-----RRSNFVYG 160 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC-----CCCCcchH
Confidence 599999999874221 11 1357888887766 566667777789999999876431 12346799
Q ss_pred HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|+....+.+. .++++++++||.+..+... ..... ...+..+|+|+.++..
T Consensus 161 ~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~----------~~~~~~~~~A~~i~~~ 219 (253)
T PRK07904 161 STKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-----------HAKEA----------PLTVDKEDVAKLAVTA 219 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-----------cCCCC----------CCCCCHHHHHHHHHHH
Confidence 999988765443 3799999999999865221 00000 1137899999999999
Q ss_pred hcCC
Q psy4233 227 CKDP 230 (303)
Q Consensus 227 ~~~~ 230 (303)
+.++
T Consensus 220 ~~~~ 223 (253)
T PRK07904 220 VAKG 223 (253)
T ss_pred HHcC
Confidence 9864
No 198
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.78 E-value=3.6e-17 Score=139.39 Aligned_cols=214 Identities=15% Similarity=0.084 Sum_probs=144.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
+++++++||||+|.||.+++++|+++|+.|+++.|+..+...... ......++.++.+|++|.+++.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567899999999999999999999999999988885433222111 11112457889999999988877654
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcC-CceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMG-VEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
.+|++||++|.... ...+..+++|+.++..++++ +++.+ -.++|++||...+. +......|+
T Consensus 85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----~~~~~~~Y~ 159 (261)
T PRK08936 85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----PWPLFVHYA 159 (261)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----CCCCCcccH
Confidence 37999999996322 22335678888777655544 45444 35899999976543 223457899
Q ss_pred HHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 154 ~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
.+|...+.+.+.. +++++.++||.+..|.... ... ...........+. ..+...+|+|+++.+
T Consensus 160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~va~~~~~ 230 (261)
T PRK08936 160 ASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-PKQRADVESMIPM--------GYIGKPEEIAAVAAW 230 (261)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-HHHHHHHHhcCCC--------CCCcCHHHHHHHHHH
Confidence 9998887766553 6899999999998774321 000 0011101112221 246789999999999
Q ss_pred HhcCC--CCCCcEEEEeCCc
Q psy4233 226 ACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 226 ~~~~~--~~~g~~~~i~~~~ 243 (303)
++... ...|+.+.+.++.
T Consensus 231 l~s~~~~~~~G~~i~~d~g~ 250 (261)
T PRK08936 231 LASSEASYVTGITLFADGGM 250 (261)
T ss_pred HcCcccCCccCcEEEECCCc
Confidence 98753 2367677776654
No 199
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.78 E-value=1.8e-17 Score=139.51 Aligned_cols=210 Identities=15% Similarity=0.121 Sum_probs=143.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-hhc-CCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
++++||||+|+||.++++.|+++|++|+++.|+.....+.. ... ....++.++.+|+.|++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47999999999999999999999999999988433222111 111 112358899999999988876654 379
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHHHHH----HHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARLARL----SKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
+|||++|.... ......++.|+.++..+.++ +++.+.+++|++||....... .....|+.+|.
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----~~~~~y~~sk~ 155 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-----FGQTNYSAAKA 155 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----CCcchhHHHHH
Confidence 99999986321 12345677888887775544 455667799999997654321 23467999999
Q ss_pred HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
..+.+++.. +++++.++|+.+.+|...... ...........+. ..+...+|+++++..++..+
T Consensus 156 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~l~~~~ 225 (242)
T TIGR01829 156 GMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR--EDVLNSIVAQIPV--------GRLGRPEEIAAAVAFLASEE 225 (242)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc--hHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHcCch
Confidence 887766553 689999999999887533211 1111111111121 23567899999998888653
Q ss_pred --CCCCcEEEEeCCc
Q psy4233 231 --DAAGKIYQAVGPK 243 (303)
Q Consensus 231 --~~~g~~~~i~~~~ 243 (303)
...|+.+.+.++.
T Consensus 226 ~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 226 AGYITGATLSINGGL 240 (242)
T ss_pred hcCccCCEEEecCCc
Confidence 2468888887764
No 200
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.78 E-value=2e-17 Score=141.30 Aligned_cols=209 Identities=12% Similarity=0.054 Sum_probs=147.2
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
+++++++++||||+|+||.++++.|+++|++|++++|+..... ..++.++.+|++|++++.++++
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFG 76 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3466789999999999999999999999999999998754321 1358889999999998887664
Q ss_pred ccCEEEEccccCcc-----------------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCC
Q psy4233 87 YSNVVINLIGREFA-----------------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYY 145 (303)
Q Consensus 87 ~~D~vi~~a~~~~~-----------------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~ 145 (303)
.+|+|||+||.... +..+..+++|+.++..+++++... +..++|++||...+...
T Consensus 77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 152 (266)
T PRK06171 77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS---- 152 (266)
T ss_pred CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----
Confidence 37999999985321 122357889999999999888642 33589999998775421
Q ss_pred CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeeccee-eCCCchh--hHH--------HHHHHhhhc--ceeeecC
Q psy4233 146 ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMY-GSGDKFL--RYY--------GHMWRHVFR--KLAVYKK 205 (303)
Q Consensus 146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~--~~~--------~~~~~~~~~--~~~~~~~ 205 (303)
.....|+.+|...+.+++.. ++++..++||.+. .+..... ... ......... ..|+
T Consensus 153 -~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--- 228 (266)
T PRK06171 153 -EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL--- 228 (266)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC---
Confidence 23478999999999887763 6899999999874 2211100 000 000000000 1121
Q ss_pred CCceeeCceeHHHHHHHHHHHhcCCC--CCCcEEEEeCCc
Q psy4233 206 GEETIKQPVYVGDVAAAIVAACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 206 ~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~ 243 (303)
..+...+|+|.++.+++.... ..|+++++.++.
T Consensus 229 -----~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~ 263 (266)
T PRK06171 229 -----GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK 263 (266)
T ss_pred -----CCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence 235788999999999987532 367788876653
No 201
>KOG1203|consensus
Probab=99.78 E-value=1.1e-17 Score=146.24 Aligned_cols=236 Identities=17% Similarity=0.030 Sum_probs=152.2
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHH-HHhcc----cC
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR-KAIKY----SN 89 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~----~D 89 (303)
++++++|||+||||.+|+.+++.|+++|+.|++++|+..+..+.+...........+..|.....+.. .+... ..
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~ 155 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV 155 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence 34577999999999999999999999999999999987766555442222344555666555443333 23222 34
Q ss_pred EEEEccccCccc-cchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCC-CCchhHHHHHHHHHHHhhC
Q psy4233 90 VVINLIGREFAT-KNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISG-GSQFYRTKYQGEKEVLREF 167 (303)
Q Consensus 90 ~vi~~a~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~-~~~y~~~K~~~e~~~~~~~ 167 (303)
+++-+++..... ....-..+.+.+++|+++||+.+|++|+|++|+++......+.+..- ...+..+|+.+|+++++.+
T Consensus 156 ~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~Sg 235 (411)
T KOG1203|consen 156 IVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDSG 235 (411)
T ss_pred eEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhcC
Confidence 666666543222 12234567899999999999999999999999888765432221111 2345589999999999999
Q ss_pred CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEEeCCcccCH
Q psy4233 168 PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQAVGPKRYLL 247 (303)
Q Consensus 168 ~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~ 247 (303)
++++|+|++...-+......... ........+++.. ..+...|+|+.++.++.++...++.+......+-.-
T Consensus 236 l~ytiIR~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~gp 307 (411)
T KOG1203|consen 236 LPYTIIRPGGLEQDTGGQREVVV-----DDEKELLTVDGGA---YSISRLDVAELVAKALLNEAATFKKVVELVLKPEGP 307 (411)
T ss_pred CCcEEEeccccccCCCCcceecc-----cCccccccccccc---eeeehhhHHHHHHHHHhhhhhccceeEEeecCCCCC
Confidence 99999999977753222111100 1111111122221 258999999999999998777665554444333333
Q ss_pred HHHHHHHHHHh
Q psy4233 248 SELLDWFHVVM 258 (303)
Q Consensus 248 ~e~~~~i~~~~ 258 (303)
....+.+.+..
T Consensus 308 g~~~~~l~~~~ 318 (411)
T KOG1203|consen 308 GRPYKVLLELF 318 (411)
T ss_pred CccHHHHHhhc
Confidence 33333333333
No 202
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.1e-17 Score=140.79 Aligned_cols=185 Identities=14% Similarity=0.045 Sum_probs=137.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc----cCEEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY----SNVVIN 93 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~D~vi~ 93 (303)
|++++||||+|+||.+++++|+++|++|++++|+... .+.+.. ...+++++.+|++|.+++.+++++ +|.+||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV-LDELHT--QSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH-HHHHHH--hcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 4689999999999999999999999999999997432 222211 124588999999999999988875 589999
Q ss_pred ccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHH
Q psy4233 94 LIGREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV 163 (303)
Q Consensus 94 ~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~ 163 (303)
++|.... +..+..+++|+.++.++++++... +..++|++||...... ......|+.+|..++.+.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~asK~a~~~~~ 152 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA-----LPRAEAYGASKAAVAYFA 152 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC-----CCCCchhhHHHHHHHHHH
Confidence 9974211 112357899999999999988753 2357999988654321 123468999999999887
Q ss_pred Hh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 164 LR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 164 ~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
+. .++++++++||.+++|..... ... . ...+..+|+|+.++..++.+
T Consensus 153 ~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~------------~~~-------~-~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 153 RTLQLDLRPKGIEVVTVFPGFVATPLTDKN------------TFA-------M-PMIITVEQASQEIRAQLARG 206 (240)
T ss_pred HHHHHHHHhcCceEEEEeCCcCCCCCcCCC------------CCC-------C-CcccCHHHHHHHHHHHHhcC
Confidence 54 378999999999998743210 000 0 11478999999999999864
No 203
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.3e-17 Score=146.93 Aligned_cols=206 Identities=13% Similarity=0.019 Sum_probs=140.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
++++++|+||||+|.||.+++++|+++|++|++++|+.....+.... .....++.++.+|++|.+++.++++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 35578999999999999999999999999999999975432211111 1112458899999999999887654
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHH----HHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPAR----LARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
.+|++||++|.... +..+..+++|+.+..+ ++..+++.+..+||++||...+... .....|+.
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~-----~~~~~Y~a 159 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI-----PLQSAYCA 159 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC-----CcchHHHH
Confidence 48999999986322 1223566777666655 4444555555799999999887531 23468999
Q ss_pred HHHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 155 TKYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 155 ~K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+|...+.+.+.. ++.+++++|+.+..|.... ..... ..... .. ..+.+.+|+|++++.
T Consensus 160 sK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~---~~~~~--~~~~~-------~~-~~~~~pe~vA~~i~~ 226 (334)
T PRK07109 160 AKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW---ARSRL--PVEPQ-------PV-PPIYQPEVVADAILY 226 (334)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh---hhhhc--ccccc-------CC-CCCCCHHHHHHHHHH
Confidence 999988766542 4789999999887663211 10000 00000 11 245789999999999
Q ss_pred HhcCCCCCCcEEEEeC
Q psy4233 226 ACKDPDAAGKIYQAVG 241 (303)
Q Consensus 226 ~~~~~~~~g~~~~i~~ 241 (303)
++.++ ...+.+.+
T Consensus 227 ~~~~~---~~~~~vg~ 239 (334)
T PRK07109 227 AAEHP---RRELWVGG 239 (334)
T ss_pred HHhCC---CcEEEeCc
Confidence 99864 23455543
No 204
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.78 E-value=4.4e-17 Score=136.73 Aligned_cols=206 Identities=15% Similarity=0.113 Sum_probs=144.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV 90 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~ 90 (303)
+++++||||+|.||++++++|+++|++|++++|+.....+.+.. .+++++.+|+.|.+++.+++. ++|+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 77 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ----AGAQCIQADFSTNAGIMAFIDELKQHTDGLRA 77 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence 57999999999999999999999999999999976443222221 237889999999988776553 3799
Q ss_pred EEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC--CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 91 VINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG--VEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
+||++|.... ......+++|+.++..+.+++.. .+ ..++|++||...... ......|+.+|
T Consensus 78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----~~~~~~Y~asK 152 (236)
T PRK06483 78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG-----SDKHIAYAASK 152 (236)
T ss_pred EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC-----CCCCccHHHHH
Confidence 9999986321 12346788899988877666543 23 358999998765421 12346899999
Q ss_pred HHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 157 YQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 157 ~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
...+.+++.+ ++++..+.||.+..+.... ...... .....++ .-+...+|+|+++.+++...
T Consensus 153 aal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-~~~~~~---~~~~~~~--------~~~~~~~~va~~~~~l~~~~ 220 (236)
T PRK06483 153 AALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-AAYRQK---ALAKSLL--------KIEPGEEEIIDLVDYLLTSC 220 (236)
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC-HHHHHH---HhccCcc--------ccCCCHHHHHHHHHHHhcCC
Confidence 9999988764 4788889999875332111 111100 1111121 11457899999999999866
Q ss_pred CCCCcEEEEeCCcc
Q psy4233 231 DAAGKIYQAVGPKR 244 (303)
Q Consensus 231 ~~~g~~~~i~~~~~ 244 (303)
...|+++.+.++..
T Consensus 221 ~~~G~~i~vdgg~~ 234 (236)
T PRK06483 221 YVTGRSLPVDGGRH 234 (236)
T ss_pred CcCCcEEEeCcccc
Confidence 56788888877643
No 205
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.78 E-value=4.5e-17 Score=138.40 Aligned_cols=210 Identities=14% Similarity=0.071 Sum_probs=145.6
Q ss_pred cCCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcc--------ccc--c-h-hcCCCCceEEEecCCCCHHH
Q psy4233 15 SFNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYD--------VRD--L-R-LCGDLGQVLFQPYHPRNDDE 80 (303)
Q Consensus 15 ~~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~--------~~~--~-~-~~~~~~~~~~~~~Dl~d~~~ 80 (303)
++++++|+|||||| .||.+++++|+++|++|+++.|++.+. ... + . ......+++++.+|+++.++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 45678999999996 699999999999999999999873211 000 0 0 00112358999999999988
Q ss_pred HHHHhc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCC
Q psy4233 81 IRKAIK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNP 141 (303)
Q Consensus 81 ~~~~~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~ 141 (303)
+..+++ .+|+|||++|.... ...+..+++|+.++..+++++... +..++|++||...+..
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~- 160 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP- 160 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC-
Confidence 776554 37999999986322 123456889999999999987542 3458999999877652
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCce
Q psy4233 142 PTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPV 214 (303)
Q Consensus 142 ~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 214 (303)
......|+.+|...+.+++.. +++++.++||.+..+... ...... .....+ . ..+.
T Consensus 161 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~--~~~~~~---~~~~~~------~--~~~~ 223 (256)
T PRK12748 161 ----MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT--EELKHH---LVPKFP------Q--GRVG 223 (256)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC--hhHHHh---hhccCC------C--CCCc
Confidence 233468999999999987653 689999999987755322 111100 001111 0 1245
Q ss_pred eHHHHHHHHHHHhcCCC--CCCcEEEEeCC
Q psy4233 215 YVGDVAAAIVAACKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 215 ~~~Dva~~~~~~~~~~~--~~g~~~~i~~~ 242 (303)
..+|+|+++..++.... ..|+.+++.++
T Consensus 224 ~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 224 EPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred CHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 68999999998887532 35788888665
No 206
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.78 E-value=2.1e-17 Score=139.69 Aligned_cols=188 Identities=14% Similarity=0.015 Sum_probs=135.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+++++||||+|+||++++++|+++|++|++++|+.....+... ......+++++.+|++|.+++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999997543221111 10112358899999999988876654 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|++||++|.... ......+++|+.++.++++++. +.+..++|++||....... +.+...|+.+
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~~Y~~s 157 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----PGVKAAYAAS 157 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----CCCcccHHHH
Confidence 8999999986322 1223567899999988888764 4566799999997664321 1234689999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+.+.. +++++.++||++.++... ..+. . ...++.+|.|++++.+++
T Consensus 158 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-----------~~~~---------~-~~~~~~~~~a~~i~~~~~ 216 (248)
T PRK08251 158 KAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA-----------KAKS---------T-PFMVDTETGVKALVKAIE 216 (248)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh-----------cccc---------C-CccCCHHHHHHHHHHHHh
Confidence 99998877642 578999999998755221 0000 1 135789999999999997
Q ss_pred CC
Q psy4233 229 DP 230 (303)
Q Consensus 229 ~~ 230 (303)
++
T Consensus 217 ~~ 218 (248)
T PRK08251 217 KE 218 (248)
T ss_pred cC
Confidence 53
No 207
>PRK07069 short chain dehydrogenase; Validated
Probab=99.77 E-value=3.1e-17 Score=138.82 Aligned_cols=210 Identities=14% Similarity=0.077 Sum_probs=142.2
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcC---CCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCG---DLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~---~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++||||+|+||.++++.|+++|++|++++|+..+..+.+. ... ....+..+.+|+.|.+++.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999997333222211 110 11224568899999998877654 47
Q ss_pred CEEEEccccCccc--------cchhhhhhhcc----hHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 89 NVVINLIGREFAT--------KNFTIADANVE----IPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~~~~--------~~~~~~~~n~~----~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
|+|||++|..... .....+++|+. .+..++.++++.+.+++|++||...+... .....|+.+|
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~-----~~~~~Y~~sK 155 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE-----PDYTAYNASK 155 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC-----CCCchhHHHH
Confidence 9999999863221 22345677877 67778888877777899999998876532 2346799999
Q ss_pred HHHHHHHHhh---------CCCEEEEeecceeeCCCchhhH-HH--HHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 157 YQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRY-YG--HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 157 ~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
...+.+++.. +++++.++||.+.+|....... .. .......+.++ . ..+.+.+|+|++++
T Consensus 156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~va~~~~ 227 (251)
T PRK07069 156 AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP-------L-GRLGEPDDVAHAVL 227 (251)
T ss_pred HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC-------C-CCCcCHHHHHHHHH
Confidence 9999887752 3678899999998875431100 00 00000111111 1 24578999999999
Q ss_pred HHhcCC--CCCCcEEEEeCC
Q psy4233 225 AACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 225 ~~~~~~--~~~g~~~~i~~~ 242 (303)
.++..+ ...|+.+.+.++
T Consensus 228 ~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 228 YLASDESRFVTGAELVIDGG 247 (251)
T ss_pred HHcCccccCccCCEEEECCC
Confidence 987653 235666666544
No 208
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.77 E-value=2.7e-17 Score=140.29 Aligned_cols=213 Identities=14% Similarity=-0.005 Sum_probs=146.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++++||||+|+||++++++|+++|++|++++|+.... +.+.... ..++.++++|+.|.+++..+++ .+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL-ASLRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5678999999999999999999999999999999975432 2211111 1358889999999988877654 47
Q ss_pred CEEEEccccCcc-----c-c-------chhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 89 NVVINLIGREFA-----T-K-------NFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 89 D~vi~~a~~~~~-----~-~-------~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
|++||++|.... . . .+..+++|+.++..+++++... .-.++|++||...+... .....|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y 156 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG-----GGGPLY 156 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----CCCchh
Confidence 999999996321 1 1 2346788999988888877532 12479999998776421 234579
Q ss_pred hHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhh---------HHHHHHHhhhcceeeecCCCceeeCceeHH
Q psy4233 153 YRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLR---------YYGHMWRHVFRKLAVYKKGEETIKQPVYVG 217 (303)
Q Consensus 153 ~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (303)
+.+|...+.+++.. ++++..+.||.+..+...... .............| . .-+...+
T Consensus 157 ~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~~~ 228 (263)
T PRK06200 157 TASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITP-------L-QFAPQPE 228 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCC-------C-CCCCCHH
Confidence 99999999988764 478888999988765321100 00000000111111 1 2368899
Q ss_pred HHHHHHHHHhcCC---CCCCcEEEEeCCc
Q psy4233 218 DVAAAIVAACKDP---DAAGKIYQAVGPK 243 (303)
Q Consensus 218 Dva~~~~~~~~~~---~~~g~~~~i~~~~ 243 (303)
|+|+++++++... ...|+.+.+.+|.
T Consensus 229 eva~~~~fl~s~~~~~~itG~~i~vdgG~ 257 (263)
T PRK06200 229 DHTGPYVLLASRRNSRALTGVVINADGGL 257 (263)
T ss_pred HHhhhhhheecccccCcccceEEEEcCce
Confidence 9999999998743 2368888887663
No 209
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.77 E-value=4.1e-17 Score=142.29 Aligned_cols=169 Identities=13% Similarity=0.011 Sum_probs=120.6
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---chhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LRLCGDLGQVLFQPYHPRNDDEIRKAIK---- 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 86 (303)
+++++++|+||||+|+||.+++++|+++|++|++++|+.....+. +.......+++++.+|+.|.+++.++++
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 456788999999999999999999999999999999975432211 1111112358899999999998887654
Q ss_pred ---ccCEEEEccccCcc------ccchhhhhhhcch----HHHHHHHHHhcCCceEEEEecCccCC--CC------CCCC
Q psy4233 87 ---YSNVVINLIGREFA------TKNFTIADANVEI----PARLARLSKEMGVEKFIHISALNADP--NP------PTYY 145 (303)
Q Consensus 87 ---~~D~vi~~a~~~~~------~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~~Ss~~~~~--~~------~~~~ 145 (303)
++|+|||+||.... +..+..+++|+.+ +..++..+++.+..++|++||...+. .. .+.+
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~ 171 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERR 171 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccC
Confidence 47999999986322 2334567889988 55666666666667999999986542 10 1112
Q ss_pred CCCCCchhHHHHHHHHHHHhh-------CCCEEE--EeecceeeCC
Q psy4233 146 ISGGSQFYRTKYQGEKEVLRE-------FPEATI--FRPSDMYGSG 182 (303)
Q Consensus 146 ~~~~~~y~~~K~~~e~~~~~~-------~~~~~i--lrp~~~~G~~ 182 (303)
..+...|+.+|...+.+.+.. ++++++ +.||.+..+.
T Consensus 172 ~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 172 YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 344568999999999887653 444444 4799887664
No 210
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.77 E-value=2.6e-17 Score=139.46 Aligned_cols=214 Identities=15% Similarity=0.079 Sum_probs=146.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
+++++||||+|.||.++++.|+++|++|++++|+........... ....+++++.+|++|++++.+++. .+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999999999999999999999999999999754322111111 112468899999999988877654 479
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
+|||++|.... +.+...+++|+.++.++++++.. .+ ..++|++||...+.. ......|+.+|
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----~~~~~~Y~~sK 155 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA-----GPGVIHSAAAK 155 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC-----CCCCcchHHHH
Confidence 99999985211 22346789999999999998843 22 358999998866532 12346799999
Q ss_pred HHHHHHHHh--------hCCCEEEEeecceeeCCC-chhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 157 YQGEKEVLR--------EFPEATIFRPSDMYGSGD-KFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 157 ~~~e~~~~~--------~~~~~~ilrp~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
...+.+.+. .|+++..++||.+.++.. .....-....+...+..++ ..+...+|+|+++..++
T Consensus 156 aa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~ 227 (252)
T PRK07677 156 AGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL--------GRLGTPEEIAGLAYFLL 227 (252)
T ss_pred HHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC--------CCCCCHHHHHHHHHHHc
Confidence 999988764 268899999999875321 1000001111111111221 23678999999999988
Q ss_pred cCC--CCCCcEEEEeCCcc
Q psy4233 228 KDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 228 ~~~--~~~g~~~~i~~~~~ 244 (303)
... ...|+.+.+.++..
T Consensus 228 ~~~~~~~~g~~~~~~gg~~ 246 (252)
T PRK07677 228 SDEAAYINGTCITMDGGQW 246 (252)
T ss_pred CccccccCCCEEEECCCee
Confidence 643 34677888876643
No 211
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.77 E-value=1.7e-17 Score=138.00 Aligned_cols=198 Identities=18% Similarity=0.081 Sum_probs=143.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCC--CCceEEEecCCCCHHHHHHHhc------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGD--LGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
.+++++++|||||+.||.+++++|.++|++|+++.|+.+...+..+...+ .-+++++.+|++|++++..+..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 35678999999999999999999999999999999986543332222211 2347899999999999888764
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
.+|++||+||.... +....++++|+.+...|.++.- +.+-.+||.++|...+-.. .-...|+
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~-----p~~avY~ 157 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT-----PYMAVYS 157 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-----cchHHHH
Confidence 48999999996322 2335788999988887777663 4455699999999998631 2236799
Q ss_pred HHHHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
.+|..+-.+-+. .|+.++.+.||.+..+... . . ......... . .-+++.+|+|+..+..
T Consensus 158 ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~---------~--~~~~~~~~~-~-~~~~~~~~va~~~~~~ 223 (265)
T COG0300 158 ATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A---------K--GSDVYLLSP-G-ELVLSPEDVAEAALKA 223 (265)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c---------c--ccccccccc-h-hhccCHHHHHHHHHHH
Confidence 999988765544 3789999999887754322 0 0 001110001 1 3479999999999999
Q ss_pred hcCCC
Q psy4233 227 CKDPD 231 (303)
Q Consensus 227 ~~~~~ 231 (303)
+.+.+
T Consensus 224 l~~~k 228 (265)
T COG0300 224 LEKGK 228 (265)
T ss_pred HhcCC
Confidence 98643
No 212
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.77 E-value=2.4e-17 Score=140.57 Aligned_cols=196 Identities=15% Similarity=0.073 Sum_probs=137.4
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc------cc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------YS 88 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~ 88 (303)
.+++++++||||+|+||.+++++|+++|++|++++|+.....+.........+++++.+|+.|.+++..+++ .+
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI 81 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 356789999999999999999999999999999999754322221111123468999999999988877654 47
Q ss_pred CEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 89 NVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
|+|||++|.... ......+++|+.++.++++++.. .+..++|++||...... ......|+.+|
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~~sK 156 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG-----YPGYASYCASK 156 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC-----CCCccHHHHHH
Confidence 999999986322 12245778999999999888753 33458999988755432 12346799999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
...+.+++.. ++.++.+.||.+..+.... . .. .. .. ... ....+.+|+|++++.++++
T Consensus 157 ~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~--~-------~~-~~--~~--~~~-~~~~~~~~va~~i~~~~~~ 221 (263)
T PRK09072 157 FALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE--A-------VQ-AL--NR--ALG-NAMDDPEDVAAAVLQAIEK 221 (263)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh--h-------cc-cc--cc--ccc-CCCCCHHHHHHHHHHHHhC
Confidence 9988776553 5788889998886543211 0 00 00 00 000 1357899999999999986
Q ss_pred C
Q psy4233 230 P 230 (303)
Q Consensus 230 ~ 230 (303)
+
T Consensus 222 ~ 222 (263)
T PRK09072 222 E 222 (263)
T ss_pred C
Confidence 4
No 213
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.77 E-value=2.9e-17 Score=142.54 Aligned_cols=205 Identities=17% Similarity=0.036 Sum_probs=141.6
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
++.+++++||||+|.||.+++++|.++|++|++++|+.....+.....+...++..+.+|++|.+++.++++ .
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 356789999999999999999999999999999999754322221222222346677799999988877654 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
+|+|||++|.... +..+..+++|+.++.++++++... ...+||++||...+... .....|+.+|
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asK 160 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA-----PGMAAYCASK 160 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC-----CCchHHHHHH
Confidence 7999999996321 122457889999999999887532 23589999998876531 2346899999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
...+.+.+.. ++.++.+.||.+..+.......-...........+. .. ..+++.+|+|++++.++..
T Consensus 161 aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~-----p~-~~~~~~~~va~~i~~~~~~ 234 (296)
T PRK05872 161 AGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPW-----PL-RRTTSVEKCAAAFVDGIER 234 (296)
T ss_pred HHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCC-----cc-cCCCCHHHHHHHHHHHHhc
Confidence 9999888653 689999999988765322100000000000111111 01 2468899999999999975
Q ss_pred C
Q psy4233 230 P 230 (303)
Q Consensus 230 ~ 230 (303)
+
T Consensus 235 ~ 235 (296)
T PRK05872 235 R 235 (296)
T ss_pred C
Confidence 3
No 214
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.76 E-value=5.9e-17 Score=137.91 Aligned_cols=214 Identities=14% Similarity=0.056 Sum_probs=140.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCEE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNVV 91 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v 91 (303)
|+++||||+|.||++++++|+++|++|++++|+.....+.........++.++.+|++|++++.++++ ++|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 58999999999999999999999999999999754322211111112358889999999998887664 48999
Q ss_pred EEccccCcc-------cc---chhhhhhhcchHHHHHHH----HH-hcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 92 INLIGREFA-------TK---NFTIADANVEIPARLARL----SK-EMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 92 i~~a~~~~~-------~~---~~~~~~~n~~~~~~l~~~----~~-~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
||++|.... .. ....+.+|+.++..+.++ +. +.+..+||++||...... ..+...|+.+|
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~y~~sK 155 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP-----MPPLVLADVTR 155 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC-----CCCchHHHHHH
Confidence 999996321 11 112345666655444433 22 233458999999877542 23456899999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCch-hhHHH--------H-HHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LRYYG--------H-MWRHVFRKLAVYKKGEETIKQPVYVGDV 219 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 219 (303)
...+.+.+.. ++.+..+.||.+-.|.... ...+. . +........| . .-+...+|+
T Consensus 156 aa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~-~r~~~p~dv 227 (259)
T PRK08340 156 AGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP-------L-KRTGRWEEL 227 (259)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC-------c-cCCCCHHHH
Confidence 9999988763 5788889999887664221 00000 0 0000011111 1 236789999
Q ss_pred HHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233 220 AAAIVAACKDP--DAAGKIYQAVGPKRY 245 (303)
Q Consensus 220 a~~~~~~~~~~--~~~g~~~~i~~~~~~ 245 (303)
|+++++++..+ ...|++..+.++...
T Consensus 228 a~~~~fL~s~~~~~itG~~i~vdgg~~~ 255 (259)
T PRK08340 228 GSLIAFLLSENAEYMLGSTIVFDGAMTR 255 (259)
T ss_pred HHHHHHHcCcccccccCceEeecCCcCC
Confidence 99999999753 336877877776543
No 215
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.76 E-value=5.7e-17 Score=137.49 Aligned_cols=214 Identities=14% Similarity=0.072 Sum_probs=141.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV 90 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~ 90 (303)
++++||||+|+||.+++++|+++|++|+++.|+.....+..+. .....++.++.+|++|++++.+++. .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4799999999999999999999999999999874322221111 1112458899999999998887654 3699
Q ss_pred EEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 91 VINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
|||++|.... ...+..+++|+.++..+++++.. .+ ..++|++||....... .....|+.+|.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~ 155 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN-----PILSAYSSTKF 155 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC-----CCCcchHHHHH
Confidence 9999986321 12235688999888877766543 23 2589999987654321 23578999999
Q ss_pred HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceee------ecCCCceeeCceeHHHHHHHHH
Q psy4233 158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAV------YKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
..+.+++.. ++.+.+++||.+..+.... +..... .....+. +...... ..+.+.+|+++++.
T Consensus 156 a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~ 230 (254)
T TIGR02415 156 AVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE---IDEETS-EIAGKPIGEGFEEFSSEIAL-GRPSEPEDVAGLVS 230 (254)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh---hhhhhh-hcccCchHHHHHHHHhhCCC-CCCCCHHHHHHHHH
Confidence 999888653 5889999999886553211 000000 0000000 0000001 23688999999999
Q ss_pred HHhcCCC--CCCcEEEEeCC
Q psy4233 225 AACKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 225 ~~~~~~~--~~g~~~~i~~~ 242 (303)
.++.... ..|+.+.+.++
T Consensus 231 ~l~~~~~~~~~g~~~~~d~g 250 (254)
T TIGR02415 231 FLASEDSDYITGQSILVDGG 250 (254)
T ss_pred hhcccccCCccCcEEEecCC
Confidence 9998643 25766666554
No 216
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.76 E-value=3.6e-17 Score=140.39 Aligned_cols=154 Identities=12% Similarity=0.011 Sum_probs=117.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccCE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSNV 90 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~ 90 (303)
|++++||||+|+||++++++|+++|++|++++|+.... +.+.. .+++++.+|++|.+++.++++ ++|+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV-EALAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 47899999999999999999999999999999975432 21111 247889999999988877653 4799
Q ss_pred EEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233 91 VINLIGREFA--------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG 159 (303)
Q Consensus 91 vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~ 159 (303)
|||++|.... +.....+++|+.++.++++++.. .+..++|++||....... .....|+.+|...
T Consensus 76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK~al 150 (274)
T PRK05693 76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT-----PFAGAYCASKAAV 150 (274)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC-----CCccHHHHHHHHH
Confidence 9999995321 22345788999999888888743 233589999987664321 2346899999998
Q ss_pred HHHHHh-------hCCCEEEEeecceeeC
Q psy4233 160 EKEVLR-------EFPEATIFRPSDMYGS 181 (303)
Q Consensus 160 e~~~~~-------~~~~~~ilrp~~~~G~ 181 (303)
+.+.+. .+++++.++||.+..+
T Consensus 151 ~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 151 HALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 887654 3799999999999765
No 217
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.76 E-value=2.6e-17 Score=144.51 Aligned_cols=199 Identities=18% Similarity=0.171 Sum_probs=139.1
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
.+.+++|+||||+|.||.+++++|+++|++|++++|+.....+..... ....++.++.+|++|.+++.++++
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 355789999999999999999999999999999999754322211111 112357889999999998887763
Q ss_pred ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 87 YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 87 ~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
++|++||+||.... +..+..+++|+.++.++.+++ ++.+..++|++||...+... .....|+.
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~-----p~~~~Y~a 158 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ-----PYAAAYSA 158 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC-----CCchhHHH
Confidence 48999999986322 122357889999998887776 33444589999998766421 22468999
Q ss_pred HHHHHHHHHHhh--------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 155 TKYQGEKEVLRE--------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 155 ~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
+|...+.+.+.. ++.++.+.||.+.+|........ ..... ... ....+.+|+|++++.+
T Consensus 159 sKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~------~~~~~------~~~-~~~~~pe~vA~~il~~ 225 (330)
T PRK06139 159 SKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY------TGRRL------TPP-PPVYDPRRVAKAVVRL 225 (330)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc------ccccc------cCC-CCCCCHHHHHHHHHHH
Confidence 999866655442 57888999999987743211100 00000 011 2357999999999999
Q ss_pred hcCCC
Q psy4233 227 CKDPD 231 (303)
Q Consensus 227 ~~~~~ 231 (303)
++++.
T Consensus 226 ~~~~~ 230 (330)
T PRK06139 226 ADRPR 230 (330)
T ss_pred HhCCC
Confidence 98654
No 218
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.76 E-value=2.7e-17 Score=139.23 Aligned_cols=211 Identities=17% Similarity=0.104 Sum_probs=137.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhccc---------
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYS--------- 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--------- 88 (303)
|++++||||+|+||++++++|+++|++|++++|+..+....+... ...+++++.+|++|.+++..+++.+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV 79 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence 468999999999999999999999999999999753322221111 1246889999999999988877542
Q ss_pred --CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----Hhc-CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 89 --NVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEM-GVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 89 --D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
+++||++|.... ......+++|+.+...+++.+ ++. +.+++|++||..+.. +..+...|
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~~~~Y 154 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----PYFGWSAY 154 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----CCCCcHHH
Confidence 178899885321 223356778888866666554 332 345899999987653 23445789
Q ss_pred hHHHHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHH-HHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 153 ~~~K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
+.+|...+.+++.. ++++..++||.+-.+......... .............. . ..+...+|+|+.
T Consensus 155 ~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~dva~~ 229 (251)
T PRK06924 155 CSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKE----E-GKLLSPEYVAKA 229 (251)
T ss_pred hHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhh----c-CCcCCHHHHHHH
Confidence 99999999988643 477888999887654321100000 00000000000000 1 136899999999
Q ss_pred HHHHhcC-CCCCCcEEEE
Q psy4233 223 IVAACKD-PDAAGKIYQA 239 (303)
Q Consensus 223 ~~~~~~~-~~~~g~~~~i 239 (303)
++.++.. ....|+.+.+
T Consensus 230 ~~~l~~~~~~~~G~~~~v 247 (251)
T PRK06924 230 LRNLLETEDFPNGEVIDI 247 (251)
T ss_pred HHHHHhcccCCCCCEeeh
Confidence 9999986 3335655544
No 219
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.76 E-value=9.3e-17 Score=137.76 Aligned_cols=196 Identities=14% Similarity=0.087 Sum_probs=136.6
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---c---h--hcCCCCceEEEecCCCCHHHHHHHhc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---L---R--LCGDLGQVLFQPYHPRNDDEIRKAIK 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~---~--~~~~~~~~~~~~~Dl~d~~~~~~~~~ 86 (303)
.+++++++||||+|+||+++++.|+++|++|++++|+....... + . ......++.++.+|++|++++.++++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999975432110 0 0 11112458899999999998887765
Q ss_pred -------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc----CCceEEEEecCccCCCCCCCCCC
Q psy4233 87 -------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM----GVEKFIHISALNADPNPPTYYIS 147 (303)
Q Consensus 87 -------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~ 147 (303)
++|+|||++|.... +..+..+++|+.++.++++++... +-.++|++||...... ....
T Consensus 83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---~~~~ 159 (273)
T PRK08278 83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP---KWFA 159 (273)
T ss_pred HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc---cccC
Confidence 48999999986321 123457789999999999998642 2348999988653321 1113
Q ss_pred CCCchhHHHHHHHHHHHhh-------CCCEEEEeeccee-eCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233 148 GGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMY-GSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV 219 (303)
Q Consensus 148 ~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 219 (303)
+...|+.+|..+|.+++.. +++++.+.|+.++ .+. .... .... ... ..+...+|+
T Consensus 160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~------~~~~---~~~~-------~~~-~~~~~p~~v 222 (273)
T PRK08278 160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA------VRNL---LGGD-------EAM-RRSRTPEIM 222 (273)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH------HHhc---cccc-------ccc-cccCCHHHH
Confidence 4578999999999988764 5788889997433 111 0000 0001 111 235789999
Q ss_pred HHHHHHHhcCC
Q psy4233 220 AAAIVAACKDP 230 (303)
Q Consensus 220 a~~~~~~~~~~ 230 (303)
|++++.++...
T Consensus 223 a~~~~~l~~~~ 233 (273)
T PRK08278 223 ADAAYEILSRP 233 (273)
T ss_pred HHHHHHHhcCc
Confidence 99999998754
No 220
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.76 E-value=3.6e-17 Score=156.08 Aligned_cols=224 Identities=16% Similarity=0.099 Sum_probs=146.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc---CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC---GDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
++++++++||||+|+||.+++++|+++|++|++++|+........... ....++..+.+|++|.+++.+++.
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 466889999999999999999999999999999999754322111111 112357789999999999888776
Q ss_pred --ccCEEEEccccCccc--------cchhhhhhhcchHHHHHHHH----HhcC-CceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 87 --YSNVVINLIGREFAT--------KNFTIADANVEIPARLARLS----KEMG-VEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 --~~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
++|+|||+||..... .....+++|+.+...+.+.+ ++.+ -.++|++||....... .....
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~-----~~~~a 565 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG-----KNASA 565 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-----CCCHH
Confidence 589999999963221 12356677777766655443 3333 2489999997654321 23478
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeeccee-eCCCchhhHHHHHHHhhh----cceeeecCCCceeeCceeHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMY-GSGDKFLRYYGHMWRHVF----RKLAVYKKGEETIKQPVYVGDV 219 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~-G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~Dv 219 (303)
|+.+|...+.+++.. ++++..++|+.++ |.+.....+........+ .....+...... ..+++.+|+
T Consensus 566 Y~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l-~r~v~peDV 644 (676)
T TIGR02632 566 YSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL-KRHIFPADI 644 (676)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCc-CCCcCHHHH
Confidence 999999999988763 6889999999887 322110000000000000 000001111111 346899999
Q ss_pred HHHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233 220 AAAIVAACKDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 220 a~~~~~~~~~~--~~~g~~~~i~~~~~ 244 (303)
|+++.+++... ...|+++++.+|..
T Consensus 645 A~av~~L~s~~~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 645 AEAVFFLASSKSEKTTGCIITVDGGVP 671 (676)
T ss_pred HHHHHHHhCCcccCCcCcEEEECCCch
Confidence 99999998643 33588899887754
No 221
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.76 E-value=2.9e-17 Score=140.01 Aligned_cols=214 Identities=14% Similarity=0.052 Sum_probs=145.8
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
.+++++++||||+|+||.+++++|+++|++|++++|+.... +.+... ...++..+++|+.|.+++.++++ .
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL-QELEAA-HGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhh-cCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 35678999999999999999999999999999999875322 222111 11358889999999888776654 4
Q ss_pred cCEEEEccccCcc-----c--------cchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 88 SNVVINLIGREFA-----T--------KNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 88 ~D~vi~~a~~~~~-----~--------~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
+|++||+||.... . ..+..+++|+.++..+++++... .-.++|++||...+.. ......
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~ 154 (262)
T TIGR03325 80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP-----NGGGPL 154 (262)
T ss_pred CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC-----CCCCch
Confidence 7999999985211 1 23467899999999999988542 1247888888765431 123468
Q ss_pred hhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhH-HHH-----H-HHh-hhcceeeecCCCceeeCceeHH
Q psy4233 152 FYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRY-YGH-----M-WRH-VFRKLAVYKKGEETIKQPVYVG 217 (303)
Q Consensus 152 y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~-~~~-----~-~~~-~~~~~~~~~~~~~~~~~~i~~~ 217 (303)
|+.+|...+.+.+.. .+++..+.||.+..+....... ... . ... ....+|+ ..+...+
T Consensus 155 Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~ 226 (262)
T TIGR03325 155 YTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPI--------GRMPDAE 226 (262)
T ss_pred hHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCC--------CCCCChH
Confidence 999999999988764 2678889999987663211000 000 0 000 0111221 2367899
Q ss_pred HHHHHHHHHhcCCC---CCCcEEEEeCCc
Q psy4233 218 DVAAAIVAACKDPD---AAGKIYQAVGPK 243 (303)
Q Consensus 218 Dva~~~~~~~~~~~---~~g~~~~i~~~~ 243 (303)
|+|++++.++..+. ..|+++.+.++.
T Consensus 227 eva~~~~~l~s~~~~~~~tG~~i~vdgg~ 255 (262)
T TIGR03325 227 EYTGAYVFFATRGDTVPATGAVLNYDGGM 255 (262)
T ss_pred HhhhheeeeecCCCcccccceEEEecCCe
Confidence 99999999887532 367788776653
No 222
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.75 E-value=8.5e-17 Score=135.20 Aligned_cols=206 Identities=12% Similarity=0.064 Sum_probs=141.9
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-h-cCCCCceEEEecCCCCHHHHHHHhc-------ccCEE
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-L-CGDLGQVLFQPYHPRNDDEIRKAIK-------YSNVV 91 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v 91 (303)
|+||||+|+||.+++++|+++|++|+++.|+..+..+... . .....++.++.+|++|.+++.++++ ..|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999998876543322211 1 1112468999999999988877654 36999
Q ss_pred EEccccCcc--------ccchhhhhhhcchHHHHHHHH-----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 92 INLIGREFA--------TKNFTIADANVEIPARLARLS-----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 92 i~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~-----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
||++|.... ..+...+++|+.++.++++++ ++.+..++|++||....... .....|+.+|..
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----~~~~~Y~~sK~a 155 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN-----RGQVNYSAAKAG 155 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC-----CCCcchHHHHHH
Confidence 999986321 234467889999999998865 22344689999997654321 234689999998
Q ss_pred HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC-
Q psy4233 159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP- 230 (303)
Q Consensus 159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~- 230 (303)
.+.+.+.. +++++.++||.+.++...... ..........|+ ..+...+|+|+++++++..+
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~~~~~ 224 (239)
T TIGR01831 156 LIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVE---HDLDEALKTVPM--------NRMGQPAEVASLAGFLMSDGA 224 (239)
T ss_pred HHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhh---HHHHHHHhcCCC--------CCCCCHHHHHHHHHHHcCchh
Confidence 87766543 689999999999877433111 111111112221 23578899999999999753
Q ss_pred -CCCCcEEEEeCC
Q psy4233 231 -DAAGKIYQAVGP 242 (303)
Q Consensus 231 -~~~g~~~~i~~~ 242 (303)
...|....+.++
T Consensus 225 ~~~~g~~~~~~gg 237 (239)
T TIGR01831 225 SYVTRQVISVNGG 237 (239)
T ss_pred cCccCCEEEecCC
Confidence 235666666544
No 223
>KOG4039|consensus
Probab=99.75 E-value=1.6e-17 Score=126.57 Aligned_cols=155 Identities=19% Similarity=0.222 Sum_probs=131.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
|+||..+|.||||-+|+.+++.+++.+ .+|+++.|+.....+. ...+.....|+...+++.+.+.++|+.++
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------~k~v~q~~vDf~Kl~~~a~~~qg~dV~Fc 89 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------DKVVAQVEVDFSKLSQLATNEQGPDVLFC 89 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------cceeeeEEechHHHHHHHhhhcCCceEEE
Confidence 578899999999999999999999998 6899999985322221 13477788899889999999999999999
Q ss_pred ccccC-ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCC-CEE
Q psy4233 94 LIGRE-FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFP-EAT 171 (303)
Q Consensus 94 ~a~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~-~~~ 171 (303)
+.|.. .......+++++-+....++++|++.|+++|+.+||.++.. .+...|...|.++|+-+.+..+ +++
T Consensus 90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~-------sSrFlY~k~KGEvE~~v~eL~F~~~~ 162 (238)
T KOG4039|consen 90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP-------SSRFLYMKMKGEVERDVIELDFKHII 162 (238)
T ss_pred eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc-------ccceeeeeccchhhhhhhhccccEEE
Confidence 98864 33345568888888889999999999999999999999987 5567899999999999999865 799
Q ss_pred EEeecceeeCCC
Q psy4233 172 IFRPSDMYGSGD 183 (303)
Q Consensus 172 ilrp~~~~G~~~ 183 (303)
|+|||.+.|.+.
T Consensus 163 i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 163 ILRPGPLLGERT 174 (238)
T ss_pred EecCcceecccc
Confidence 999999999643
No 224
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.2e-16 Score=136.50 Aligned_cols=215 Identities=10% Similarity=-0.045 Sum_probs=144.1
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
++++++++||||+|.||.+++++|+++|++|++++|+..+..+... ......++..+.+|++|.+++.++++
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 3557899999999999999999999999999999997543222111 11111357889999999988876553
Q ss_pred --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
.+|++||+||.... ......+++|+.+...+++++ ++.+..++|++||....... .....|
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~y 159 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE-----PHMVAT 159 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC-----CCchHh
Confidence 37999999996321 123456677777766666554 44445699999998775421 223679
Q ss_pred hHHHHHHHHHHHh-------hCCCEEEEeecceeeCCCch-hh-------HHHHHHHh--hhcceeeecCCCceeeCcee
Q psy4233 153 YRTKYQGEKEVLR-------EFPEATIFRPSDMYGSGDKF-LR-------YYGHMWRH--VFRKLAVYKKGEETIKQPVY 215 (303)
Q Consensus 153 ~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~-~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ 215 (303)
+.+|...+.+.+. .+++++.++||.+..|.... .. .+..+... ....+|+ ..+..
T Consensus 160 ~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~ 231 (265)
T PRK07062 160 SAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL--------GRLGR 231 (265)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc--------CCCCC
Confidence 9999988877764 26899999999987653210 00 00000000 0111121 23678
Q ss_pred HHHHHHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233 216 VGDVAAAIVAACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 216 ~~Dva~~~~~~~~~~--~~~g~~~~i~~~ 242 (303)
.+|+|++++.++... ...|+++.+.++
T Consensus 232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 232 PDEAARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred HHHHHHHHHHHhCchhcccccceEEEcCc
Confidence 999999999998742 346888888766
No 225
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.75 E-value=2.5e-17 Score=138.88 Aligned_cols=155 Identities=17% Similarity=0.100 Sum_probs=117.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----------
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----------- 86 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----------- 86 (303)
||+++||||||+||.+++++|+++|++|++++|+..... .. ....+++++.+|+.|.+++..++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AA--AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hh--ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 569999999999999999999999999999999754321 11 112468899999999988887432
Q ss_pred ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 87 YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 87 ~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
..|++||++|.... +.....+++|+.++..+.+.+. +.+.+++|++||...+.. ..+...|+
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~ 151 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA-----YAGWSVYC 151 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC-----CCCchHHH
Confidence 36899999986322 1234677889998666655543 344569999999877642 23457899
Q ss_pred HHHHHHHHHHHhh------CCCEEEEeecceeeC
Q psy4233 154 RTKYQGEKEVLRE------FPEATIFRPSDMYGS 181 (303)
Q Consensus 154 ~~K~~~e~~~~~~------~~~~~ilrp~~~~G~ 181 (303)
.+|...|.+++.+ ++++..++||.+-.|
T Consensus 152 ~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 152 ATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 9999999988743 688999999887554
No 226
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.75 E-value=2e-16 Score=134.13 Aligned_cols=212 Identities=11% Similarity=0.063 Sum_probs=145.1
Q ss_pred CCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 16 FNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 16 ~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
+++++++||||+ +-||.+++++|+++|++|++..|+. ...+..+... ..++.++++|++|++++.++++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV-DEEDLLVECDVASDESIERAFATIKERVG 82 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc-cCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 457899999999 7999999999999999999998862 2222222111 1357889999999988876543
Q ss_pred ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 87 YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 87 ~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
.+|++||+||.... +..+..+++|+.++..+.+++... .-.++|++||...... ......|
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----~~~~~~Y 157 (252)
T PRK06079 83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA-----IPNYNVM 157 (252)
T ss_pred CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc-----CCcchhh
Confidence 37999999986321 123457788998888888877542 1248999998765431 1234679
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+.+|...+.+.+.. |+.+..+.||.+-.+.......-....+......|. ..+...+|+|+++++
T Consensus 158 ~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~~~~ 229 (252)
T PRK06079 158 GIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD--------GVGVTIEEVGNTAAF 229 (252)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc--------cCCCCHHHHHHHHHH
Confidence 99999999988763 689999999999766321110001111111112221 236888999999999
Q ss_pred HhcCC--CCCCcEEEEeCC
Q psy4233 226 ACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 226 ~~~~~--~~~g~~~~i~~~ 242 (303)
++..+ ...|+++.+.++
T Consensus 230 l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 230 LLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred HhCcccccccccEEEeCCc
Confidence 99753 336777777665
No 227
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.75 E-value=1.2e-16 Score=135.99 Aligned_cols=216 Identities=14% Similarity=0.140 Sum_probs=146.0
Q ss_pred CcccCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcc--cccchhcCCCCceEEEecCCCCHHHHHHHhc-
Q psy4233 12 GRSSFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYD--VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK- 86 (303)
Q Consensus 12 ~~~~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 86 (303)
.++++++++++||||+ +.||.+++++|+++|++|++..|+.... .+.+. ...+.+.++.+|++|.+++.++++
T Consensus 4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~ 81 (258)
T PRK07533 4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLA--EELDAPIFLPLDVREPGQLEAVFAR 81 (258)
T ss_pred cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHH--HhhccceEEecCcCCHHHHHHHHHH
Confidence 4556778999999998 4999999999999999999988864321 11111 111335678999999988876653
Q ss_pred ------ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCC
Q psy4233 87 ------YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYI 146 (303)
Q Consensus 87 ------~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~ 146 (303)
..|++||+||.... +..+..+++|+.++..+.+++... .-.++|++||...... .
T Consensus 82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~-----~ 156 (258)
T PRK07533 82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV-----V 156 (258)
T ss_pred HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC-----C
Confidence 37999999986321 223468899999999988876432 1148999998765421 1
Q ss_pred CCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233 147 SGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV 219 (303)
Q Consensus 147 ~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 219 (303)
.....|+.+|...+.+.+.. ++.+..+.||.+-.+...................|. ..+...+|+
T Consensus 157 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~dv 228 (258)
T PRK07533 157 ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL--------RRLVDIDDV 228 (258)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc--------CCCCCHHHH
Confidence 23467999999998877653 688999999988765321100011111111112221 236788999
Q ss_pred HHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233 220 AAAIVAACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 220 a~~~~~~~~~~--~~~g~~~~i~~~ 242 (303)
|+++++++..+ ...|+.+.+.++
T Consensus 229 a~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 229 GAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred HHHHHHHhChhhccccCcEEeeCCc
Confidence 99999999752 346777777655
No 228
>PRK06484 short chain dehydrogenase; Validated
Probab=99.74 E-value=1.5e-16 Score=148.77 Aligned_cols=212 Identities=12% Similarity=0.063 Sum_probs=150.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
.+++++||||+|.||.+++++|+++|++|++++|+.....+..... ..++..+.+|++|++++.++++ .+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--GDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999999999999999999743322211111 1356789999999998887664 379
Q ss_pred EEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 90 VVINLIGREFA---------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 90 ~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
++||+||.... ...+..+++|+.++.++++++... +-.+||++||...... ......|+.+|..
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asKaa 420 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA-----LPPRNAYCASKAA 420 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC-----CCCCchhHHHHHH
Confidence 99999996321 123467899999999999987653 2358999999877642 2345789999999
Q ss_pred HHHHHHhh-------CCCEEEEeecceeeCCCchhhHH-HHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYY-GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
.+.+.+.. ++++..+.||.+..+........ ........+..++ ..+...+|+|++++.++...
T Consensus 421 l~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dia~~~~~l~s~~ 492 (520)
T PRK06484 421 VTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL--------GRLGDPEEVAEAIAFLASPA 492 (520)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCcc
Confidence 99888763 68999999999987642211000 0000001111221 23578999999999999753
Q ss_pred --CCCCcEEEEeCCc
Q psy4233 231 --DAAGKIYQAVGPK 243 (303)
Q Consensus 231 --~~~g~~~~i~~~~ 243 (303)
...|+.+.+.++.
T Consensus 493 ~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 493 ASYVNGATLTVDGGW 507 (520)
T ss_pred ccCccCcEEEECCCc
Confidence 2468888887664
No 229
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.74 E-value=2e-16 Score=135.19 Aligned_cols=211 Identities=13% Similarity=0.089 Sum_probs=141.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccc-hhcC--CCCceEEEecCCCCHHHH----HHHh------
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDL-RLCG--DLGQVLFQPYHPRNDDEI----RKAI------ 85 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~----~~~~------ 85 (303)
+.++||||+|+||.+++++|+++|++|+++.|+..+..+.+ .... ...++.++.+|++|.+++ .+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999877543332221 1111 113466789999998754 3332
Q ss_pred -cccCEEEEccccCcc------c-------------cchhhhhhhcchHHHHHHHHHhcC----------CceEEEEecC
Q psy4233 86 -KYSNVVINLIGREFA------T-------------KNFTIADANVEIPARLARLSKEMG----------VEKFIHISAL 135 (303)
Q Consensus 86 -~~~D~vi~~a~~~~~------~-------------~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~v~~Ss~ 135 (303)
.++|+|||+||.... . .....+++|+.++..+++++.... ..+++++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 358999999985321 1 123568899999988888754221 1368888876
Q ss_pred ccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCc
Q psy4233 136 NADPNPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEE 208 (303)
Q Consensus 136 ~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (303)
.... +......|+.+|..++.+.+.. |++++.++||.+..|..... .....+ ....++ .
T Consensus 162 ~~~~-----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~-~~~~~~---~~~~~~-----~ 227 (267)
T TIGR02685 162 MTDQ-----PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF-EVQEDY---RRKVPL-----G 227 (267)
T ss_pred hccC-----CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch-hHHHHH---HHhCCC-----C
Confidence 5542 2244578999999999988763 68999999999876633211 111111 111221 0
Q ss_pred eeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233 209 TIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY 245 (303)
Q Consensus 209 ~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~ 245 (303)
..+...+|+|++++.++.+. ...|+.+.+.++..+
T Consensus 228 --~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~ 264 (267)
T TIGR02685 228 --QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264 (267)
T ss_pred --cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence 13578999999999999754 236778888776544
No 230
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3.5e-16 Score=133.34 Aligned_cols=215 Identities=14% Similarity=0.052 Sum_probs=146.7
Q ss_pred ccCCCcEEEEEcCCC-hhHHHHHHHHHhCCCeEEEeecCCCcccccchhc---CCCCceEEEecCCCCHHHHHHHhc---
Q psy4233 14 SSFNGVVATVFGASG-YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC---GDLGQVLFQPYHPRNDDEIRKAIK--- 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG-~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~--- 86 (303)
..+++++++||||+| .||.++++.|+++|++|++++|+.....+..... ....++.++++|+.+++++.++++
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 345678999999998 6999999999999999999888654322211111 111358899999999988887664
Q ss_pred ----ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCC
Q psy4233 87 ----YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGG 149 (303)
Q Consensus 87 ----~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~ 149 (303)
.+|++||++|.... ......+++|+.++..+++++.. .+ -.++|++||...+.. ....
T Consensus 93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----~~~~ 167 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA-----QHGQ 167 (262)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----CCCC
Confidence 47999999996321 22345677899999888887643 22 348898888765432 1345
Q ss_pred CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
..|+.+|...+.+.+.. ++++..++||.+..|...... ............++ .-+...+|+|++
T Consensus 168 ~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~--------~r~~~p~~va~~ 238 (262)
T PRK07831 168 AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAREAF--------GRAAEPWEVANV 238 (262)
T ss_pred cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhcCCC--------CCCcCHHHHHHH
Confidence 68999999999988763 689999999999887432110 01111111111221 236788999999
Q ss_pred HHHHhcCCC--CCCcEEEEeCC
Q psy4233 223 IVAACKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 223 ~~~~~~~~~--~~g~~~~i~~~ 242 (303)
+++++.... ..|+.+.+.++
T Consensus 239 ~~~l~s~~~~~itG~~i~v~~~ 260 (262)
T PRK07831 239 IAFLASDYSSYLTGEVVSVSSQ 260 (262)
T ss_pred HHHHcCchhcCcCCceEEeCCC
Confidence 999997532 36777776553
No 231
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.74 E-value=2.4e-16 Score=134.14 Aligned_cols=215 Identities=11% Similarity=0.005 Sum_probs=147.2
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhc---ccC
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK---YSN 89 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~---~~D 89 (303)
.+++++++||||+|.||.++++.|+++|++|++++|+............ ...+++++.+|++|.+++.++++ .+|
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 3567899999999999999999999999999999997543222111111 12358899999999999887665 389
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKY 157 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~ 157 (303)
.+||++|.... +.....+++|+.+...+++++ ++.+..++|++||..... +......|+.+|.
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----~~~~~~~y~ask~ 158 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----PDADYICGSAGNA 158 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----CCCCchHhHHHHH
Confidence 99999986321 122456788999888888876 333345899999876542 1233456889999
Q ss_pred HHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHH----------HHHHhhhcceeeecCCCceeeCceeHHHHH
Q psy4233 158 QGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYG----------HMWRHVFRKLAVYKKGEETIKQPVYVGDVA 220 (303)
Q Consensus 158 ~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 220 (303)
..+.+.+.. +++++.+.||.+..|... ..+. ..++.....+|. ..+...+|+|
T Consensus 159 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va 228 (259)
T PRK06125 159 ALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML--TLLKGRARAELGDESRWQELLAGLPL--------GRPATPEEVA 228 (259)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCccccHHHH--HHHHhhhhcccCCHHHHHHHhccCCc--------CCCcCHHHHH
Confidence 998877763 689999999988765211 0000 000000011111 2357899999
Q ss_pred HHHHHHhcCC--CCCCcEEEEeCCcc
Q psy4233 221 AAIVAACKDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 221 ~~~~~~~~~~--~~~g~~~~i~~~~~ 244 (303)
++++.++... ...|+.+.+.++..
T Consensus 229 ~~~~~l~~~~~~~~~G~~i~vdgg~~ 254 (259)
T PRK06125 229 DLVAFLASPRSGYTSGTVVTVDGGIS 254 (259)
T ss_pred HHHHHHcCchhccccCceEEecCCee
Confidence 9999998743 33688888877643
No 232
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.73 E-value=3.1e-16 Score=134.65 Aligned_cols=216 Identities=13% Similarity=0.072 Sum_probs=143.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhc------ccCE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIK------YSNV 90 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------~~D~ 90 (303)
.+.++|||| |+||.+++++|. +|++|++++|+..+..+...... ...++.++.+|++|.+++.++++ .+|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 467899998 799999999996 89999999997543222111111 11358889999999998887764 3899
Q ss_pred EEEccccC-ccccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCC--------------C----C----C
Q psy4233 91 VINLIGRE-FATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPP--------------T----Y----Y 145 (303)
Q Consensus 91 vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~--------------~----~----~ 145 (303)
+||+||.. ....+...+++|+.++.++++++... .-.++|++||........ . . +
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQP 159 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccc
Confidence 99999974 23456788999999999999988643 113567777765532110 0 0 0
Q ss_pred ---CCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch-hh-HHHHHHHhhhcceeeecCCCceeeCc
Q psy4233 146 ---ISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF-LR-YYGHMWRHVFRKLAVYKKGEETIKQP 213 (303)
Q Consensus 146 ---~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (303)
......|+.+|+..+.+.+.. ++.+..+.||.+..+.... .. .-...........|+ ..+
T Consensus 160 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~--------~r~ 231 (275)
T PRK06940 160 DAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA--------GRP 231 (275)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc--------ccC
Confidence 012467999999988877642 6889999999998763211 00 000000000111121 236
Q ss_pred eeHHHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233 214 VYVGDVAAAIVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 214 i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
...+|+|+++++++... ...|+.+.+.++.
T Consensus 232 ~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred CCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 88999999999998643 3368888887764
No 233
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.73 E-value=3.1e-16 Score=131.83 Aligned_cols=190 Identities=14% Similarity=0.068 Sum_probs=132.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCCC--HHHHHHHh------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPRN--DDEIRKAI------ 85 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~d--~~~~~~~~------ 85 (303)
+.+++++||||+|+||.+++++|+++|++|++++|+........... .....+.++.+|+.| .+++.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 55689999999999999999999999999999999864322111110 111346778899875 33343332
Q ss_pred --cccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233 86 --KYSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGS 150 (303)
Q Consensus 86 --~~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~ 150 (303)
..+|+|||+||.... +.....+++|+.++.++++++.. .+..++|++||..... |.....
T Consensus 84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----~~~~~~ 158 (239)
T PRK08703 84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET-----PKAYWG 158 (239)
T ss_pred hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----CCCCcc
Confidence 347999999995321 12234678999998888887743 3446999999876543 122346
Q ss_pred chhHHHHHHHHHHHhh--------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 151 QFYRTKYQGEKEVLRE--------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 151 ~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
.|+.+|+..+.+++.. +++++.++||.+++|.... . .+ +... ......+|++.+
T Consensus 159 ~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~--~-----------~~----~~~~-~~~~~~~~~~~~ 220 (239)
T PRK08703 159 GFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK--S-----------HP----GEAK-SERKSYGDVLPA 220 (239)
T ss_pred chHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc--c-----------CC----CCCc-cccCCHHHHHHH
Confidence 8999999999987653 4788899999999874220 0 00 0111 235789999999
Q ss_pred HHHHhc
Q psy4233 223 IVAACK 228 (303)
Q Consensus 223 ~~~~~~ 228 (303)
++.++.
T Consensus 221 ~~~~~~ 226 (239)
T PRK08703 221 FVWWAS 226 (239)
T ss_pred HHHHhC
Confidence 999997
No 234
>KOG1372|consensus
Probab=99.73 E-value=1.7e-16 Score=127.42 Aligned_cols=237 Identities=14% Similarity=0.039 Sum_probs=171.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc-ccch-hcCC-----CCceEEEecCCCCHHHHHHHhcc--cC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV-RDLR-LCGD-----LGQVLFQPYHPRNDDEIRKAIKY--SN 89 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~-~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~--~D 89 (303)
+..||||-||.=|+.|+..|+.+||+|.++.|+..+-. ..+. ++.+ .....++.+|++|...+.+++.- ++
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt 108 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT 108 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence 46899999999999999999999999999998754321 1111 1111 13478899999999999998875 89
Q ss_pred EEEEccccC----ccccchhhhhhhcchHHHHHHHHHhcCC---ceEEEEecCccCCC------CCCCCCCCCCchhHHH
Q psy4233 90 VVINLIGRE----FATKNFTIADANVEIPARLARLSKEMGV---EKFIHISALNADPN------PPTYYISGGSQFYRTK 156 (303)
Q Consensus 90 ~vi~~a~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~~Ss~~~~~~------~~~~~~~~~~~y~~~K 156 (303)
-|+|+|+++ .++-++...++...++.+|+++.+..+. -||...||..-|+. .+.+|..|.+||+.+|
T Consensus 109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aK 188 (376)
T KOG1372|consen 109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAK 188 (376)
T ss_pred hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhh
Confidence 999999974 3466777888899999999999998764 28888999888885 4667888999999999
Q ss_pred HHHHHHHHhh----CCCEEEEeecceee---CCCc--hh-hHHHHHHHh---hhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233 157 YQGEKEVLRE----FPEATIFRPSDMYG---SGDK--FL-RYYGHMWRH---VFRKLAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 157 ~~~e~~~~~~----~~~~~ilrp~~~~G---~~~~--~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
...-+++-.+ ++-.+ -|.++- |..+ +. ..+.+-... ........|+-... +||-|..|.++++
T Consensus 189 my~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~-RDWGhA~dYVEAM 264 (376)
T KOG1372|consen 189 MYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSAL-RDWGHAGDYVEAM 264 (376)
T ss_pred hhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhh-cccchhHHHHHHH
Confidence 8776654332 33222 233332 4322 21 111111111 11122223333444 8999999999999
Q ss_pred HHHhcCCCCCCcEEEEeCCcccCHHHHHHHHHHHhcCC
Q psy4233 224 VAACKDPDAAGKIYQAVGPKRYLLSELLDWFHVVMKKG 261 (303)
Q Consensus 224 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~ 261 (303)
+.+++++.. .-|.+..++..|.+|+.+......|+.
T Consensus 265 W~mLQ~d~P--dDfViATge~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 265 WLMLQQDSP--DDFVIATGEQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred HHHHhcCCC--CceEEecCCcccHHHHHHHHHHhhCcE
Confidence 999998664 369999999999999999999988854
No 235
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=3.1e-16 Score=132.51 Aligned_cols=193 Identities=10% Similarity=0.000 Sum_probs=133.2
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc--CCCCceEEEecCCC--CHHHHHHH------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC--GDLGQVLFQPYHPR--NDDEIRKA------ 84 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~~~~~Dl~--d~~~~~~~------ 84 (303)
.+.+++|+||||+|+||.+++++|++.|++|++++|+..+........ ....+++++.+|++ +.+++.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999754322211111 11235677888885 55544433
Q ss_pred -hcccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233 85 -IKYSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGS 150 (303)
Q Consensus 85 -~~~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~ 150 (303)
+..+|+|||+|+.... ......+++|+.++.++++++ ++.+..++|++||....... ....
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-----~~~~ 163 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR-----ANWG 163 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC-----CCCc
Confidence 3358999999986322 223467889999988888876 34567799999997654321 2346
Q ss_pred chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233 151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
.|+.+|...+.+++.. +++++.++|+.+-++.... . . ... .. ..+...+|+++++
T Consensus 164 ~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~--~-------~-~~~-------~~-~~~~~~~~~~~~~ 225 (247)
T PRK08945 164 AYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS--A-------F-PGE-------DP-QKLKTPEDIMPLY 225 (247)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh--h-------c-Ccc-------cc-cCCCCHHHHHHHH
Confidence 8999999999987763 5778888888775442110 0 0 000 11 2468899999999
Q ss_pred HHHhcCC
Q psy4233 224 VAACKDP 230 (303)
Q Consensus 224 ~~~~~~~ 230 (303)
+.++..+
T Consensus 226 ~~~~~~~ 232 (247)
T PRK08945 226 LYLMGDD 232 (247)
T ss_pred HHHhCcc
Confidence 9988643
No 236
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.73 E-value=2.5e-16 Score=131.05 Aligned_cols=190 Identities=11% Similarity=0.017 Sum_probs=137.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----ccCEEEEc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----YSNVVINL 94 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~D~vi~~ 94 (303)
|+++||||+|.||++++++|+++|++|+++.|+..+..+.... .+++++++|++|.+++.++++ .+|++||+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE----LDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 4899999999999999999999999999999975332111111 136788999999999888775 48999999
Q ss_pred cccCc-------------cccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233 95 IGREF-------------ATKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG 159 (303)
Q Consensus 95 a~~~~-------------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~ 159 (303)
+|... .+..+..+++|+.++..+++++... .-.++|++||... .....|+.+|+..
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------~~~~~Y~asKaal 147 (223)
T PRK05884 77 PAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------PAGSAEAAIKAAL 147 (223)
T ss_pred CCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------CCccccHHHHHHH
Confidence 87411 1223467899999999999987542 1248999998751 2236899999999
Q ss_pred HHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--
Q psy4233 160 EKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-- 230 (303)
Q Consensus 160 e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-- 230 (303)
+.+.+.. ++++..+.||.+..+.. . ..... ..-..+|+|+++++++...
T Consensus 148 ~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~----------~-~~~~~-----------p~~~~~~ia~~~~~l~s~~~~ 205 (223)
T PRK05884 148 SNWTAGQAAVFGTRGITINAVACGRSVQPGY----------D-GLSRT-----------PPPVAAEIARLALFLTTPAAR 205 (223)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCccCchhh----------h-hccCC-----------CCCCHHHHHHHHHHHcCchhh
Confidence 9888763 57899999998864411 0 00011 1127899999999998743
Q ss_pred CCCCcEEEEeCCc
Q psy4233 231 DAAGKIYQAVGPK 243 (303)
Q Consensus 231 ~~~g~~~~i~~~~ 243 (303)
...|+++.+.++.
T Consensus 206 ~v~G~~i~vdgg~ 218 (223)
T PRK05884 206 HITGQTLHVSHGA 218 (223)
T ss_pred ccCCcEEEeCCCe
Confidence 2367777776654
No 237
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=5.2e-16 Score=132.20 Aligned_cols=214 Identities=15% Similarity=0.112 Sum_probs=141.1
Q ss_pred CCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+++++++|||| ++.||.+++++|+++|++|++..|... ..+... ..........+++|+.|++++.++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 56789999997 679999999999999999998776422 111111 11111235678999999988887653
Q ss_pred -ccCEEEEccccCcc---------c----cchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCCCCCCCCCC
Q psy4233 87 -YSNVVINLIGREFA---------T----KNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNPPTYYISGG 149 (303)
Q Consensus 87 -~~D~vi~~a~~~~~---------~----~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~~~~~~~~~ 149 (303)
++|++||+||.... . ..+..+++|+.++..+.+++.. .+-.++|++||...... ....
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~-----~~~~ 157 (261)
T PRK08690 83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA-----IPNY 157 (261)
T ss_pred CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC-----CCCc
Confidence 37999999986421 1 1123467788887777766532 12248999998876531 1234
Q ss_pred CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
..|+.+|...+.+.+.. ++++..+.||.+-.+...................|+ ..+...+|+|++
T Consensus 158 ~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~peevA~~ 229 (261)
T PRK08690 158 NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL--------RRNVTIEEVGNT 229 (261)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC--------CCCCCHHHHHHH
Confidence 67999999999877653 689999999998765321100001111101111221 236889999999
Q ss_pred HHHHhcCC--CCCCcEEEEeCCc
Q psy4233 223 IVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 223 ~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
+++++... ...|+.+.+.++.
T Consensus 230 v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 230 AAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred HHHHhCcccCCcceeEEEEcCCc
Confidence 99999753 3367788777664
No 238
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.72 E-value=5.4e-16 Score=132.81 Aligned_cols=214 Identities=11% Similarity=0.105 Sum_probs=142.6
Q ss_pred CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+++++++||||++ .||.+++++|+++|++|++..|+... .+... ..........+++|++|.+++.++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5678999999997 99999999999999999998886321 11111 11111223578999999988877653
Q ss_pred -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
.+|++||+||.... +.....+++|+.++.++++++... .-.++|++||...... ......
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~-----~~~~~~ 158 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV-----MPNYNV 158 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc-----CCccch
Confidence 37999999996321 123456788999888887766421 1148999999865431 123468
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|+.+|...+.+.+.. ++++..+.||.+..+.......-........+..|+ ..+...+|+|++++
T Consensus 159 Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~peeva~~~~ 230 (271)
T PRK06505 159 MGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL--------RRTVTIDEVGGSAL 230 (271)
T ss_pred hhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc--------cccCCHHHHHHHHH
Confidence 999999999887763 688999999998765321110000010001112221 12568899999999
Q ss_pred HHhcCCC--CCCcEEEEeCCc
Q psy4233 225 AACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 225 ~~~~~~~--~~g~~~~i~~~~ 243 (303)
+++.... ..|+.+.+.++.
T Consensus 231 fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 231 YLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred HHhCccccccCceEEeecCCc
Confidence 9997432 367788877664
No 239
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.72 E-value=3.9e-16 Score=133.75 Aligned_cols=215 Identities=11% Similarity=0.112 Sum_probs=144.1
Q ss_pred CCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+.+++++||||+ +.||.+++++|+++|++|++..|+.. ..+.+. ..........+++|++|++++.++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 457899999997 89999999999999999988877521 111111 11111335678999999988887654
Q ss_pred -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
..|++||+||.... +.....+++|+.++..+++++... +-.++|++||.+.... ......
T Consensus 87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----~p~~~~ 161 (272)
T PRK08159 87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV-----MPHYNV 161 (272)
T ss_pred CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC-----CCcchh
Confidence 37999999986321 133468889999999998877542 1248999998765421 123467
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|+.+|...+.+.+.. ++++..+.||.+..+...................|+ ..+...+|+|++++
T Consensus 162 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~peevA~~~~ 233 (272)
T PRK08159 162 MGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL--------RRTVTIEEVGDSAL 233 (272)
T ss_pred hhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcc--------cccCCHHHHHHHHH
Confidence 999999999888763 588999999988654211000000000001112221 13578999999999
Q ss_pred HHhcCC--CCCCcEEEEeCCcc
Q psy4233 225 AACKDP--DAAGKIYQAVGPKR 244 (303)
Q Consensus 225 ~~~~~~--~~~g~~~~i~~~~~ 244 (303)
+++... ...|+.+.+.++..
T Consensus 234 ~L~s~~~~~itG~~i~vdgG~~ 255 (272)
T PRK08159 234 YLLSDLSRGVTGEVHHVDSGYH 255 (272)
T ss_pred HHhCccccCccceEEEECCCce
Confidence 999743 33687888877743
No 240
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.72 E-value=6.9e-16 Score=134.46 Aligned_cols=210 Identities=14% Similarity=0.150 Sum_probs=141.2
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch--hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR--LCGDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
.++++++++||||+|+||.+++++|+++|++|++.+++.....+... +.....++.++.+|++|.+++.++++
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 34568899999999999999999999999999998875432221111 11112468899999999988887664
Q ss_pred -ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhc--------C---CceEEEEecCccCCCCCCCCC
Q psy4233 87 -YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEM--------G---VEKFIHISALNADPNPPTYYI 146 (303)
Q Consensus 87 -~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--------~---~~~~v~~Ss~~~~~~~~~~~~ 146 (303)
.+|++||+||.... ......+++|+.++.++++++... + ..++|++||.......
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 162 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP----- 162 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC-----
Confidence 48999999996422 233467889999999999876421 1 1489999998765421
Q ss_pred CCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHH
Q psy4233 147 SGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDV 219 (303)
Q Consensus 147 ~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 219 (303)
.....|+.+|..++.+.+.. ++++..+.|+. ..+ ... .... ..+.. .... ..++..+|+
T Consensus 163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~---~~~---~~~~----~~~~~--~~~~-~~~~~pe~v 228 (306)
T PRK07792 163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA---MTA---DVFG----DAPDV--EAGG-IDPLSPEHV 228 (306)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc---hhh---hhcc----ccchh--hhhc-cCCCCHHHH
Confidence 23457999999999887653 57777788862 111 000 0000 00000 0011 345689999
Q ss_pred HHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233 220 AAAIVAACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 220 a~~~~~~~~~~--~~~g~~~~i~~~ 242 (303)
|.+++.++... ...|++|.+.++
T Consensus 229 a~~v~~L~s~~~~~~tG~~~~v~gg 253 (306)
T PRK07792 229 VPLVQFLASPAAAEVNGQVFIVYGP 253 (306)
T ss_pred HHHHHHHcCccccCCCCCEEEEcCC
Confidence 99999988642 246777777554
No 241
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.72 E-value=2.8e-16 Score=134.67 Aligned_cols=214 Identities=9% Similarity=0.018 Sum_probs=143.2
Q ss_pred cCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCC--cccccchhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233 15 SFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNF--YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---- 86 (303)
Q Consensus 15 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 86 (303)
.+++++++||||+ +.||.++++.|+++|++|++..|+.. +..+.+..... .. ..+.+|++|.+++.++++
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence 3567899999997 79999999999999999999888632 11111111111 12 578999999988877653
Q ss_pred ---ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCC
Q psy4233 87 ---YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGG 149 (303)
Q Consensus 87 ---~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~ 149 (303)
.+|++||+||.... +..+..+++|+.++..+.+++-.. .-.++|++||.+.... ....
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~-----~~~~ 154 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY-----VPHY 154 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC-----CCcc
Confidence 37999999996321 123467899999998888876532 1148999998765431 1224
Q ss_pred CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
..|+.+|+..+.+.+.. ++.+..+.||.+..+...................|. .-+...+|+|++
T Consensus 155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl--------~r~~~pedva~~ 226 (274)
T PRK08415 155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL--------KKNVSIEEVGNS 226 (274)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch--------hccCCHHHHHHH
Confidence 67999999998887763 688999999988765211000000000000111221 235788999999
Q ss_pred HHHHhcCC--CCCCcEEEEeCCc
Q psy4233 223 IVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 223 ~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
+++++... ...|+.+.+.++.
T Consensus 227 v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 227 GMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred HHHHhhhhhhcccccEEEEcCcc
Confidence 99999743 3468788777764
No 242
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.71 E-value=3.7e-16 Score=134.00 Aligned_cols=197 Identities=12% Similarity=0.025 Sum_probs=133.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cC-CCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CG-DLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
|+++||||+|.||.++++.|+++|++|++++|+.....+.... .. ....+.++.+|++|++++.+++. ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999998865322111111 00 11224567899999988776554 379
Q ss_pred EEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh-----cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 90 VVINLIGREFA--------TKNFTIADANVEIPARLARLSKE-----MGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 90 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
+|||++|.... +.....+++|+.++.++++++.. ....++|++||...... ......|+.+|
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~-----~~~~~~Y~~sK 155 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA-----LPWHAAYSASK 155 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC-----CCCCcchHHHH
Confidence 99999986321 22346789999999999998742 22358999999865432 12346799999
Q ss_pred HHHHHHHHh-------hCCCEEEEeecceeeCCCchhhH-----HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 157 YQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRY-----YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
...+.+.+. .++++++++||.+.+|....... ........... .. ...++.+|+|++++
T Consensus 156 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~vA~~~~ 226 (272)
T PRK07832 156 FGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR--------FR-GHAVTPEKAAEKIL 226 (272)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh--------cc-cCCCCHHHHHHHHH
Confidence 877776643 36999999999998774321100 00000000000 01 23589999999999
Q ss_pred HHhcC
Q psy4233 225 AACKD 229 (303)
Q Consensus 225 ~~~~~ 229 (303)
.++.+
T Consensus 227 ~~~~~ 231 (272)
T PRK07832 227 AGVEK 231 (272)
T ss_pred HHHhc
Confidence 99964
No 243
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.71 E-value=7.2e-16 Score=131.29 Aligned_cols=214 Identities=11% Similarity=0.076 Sum_probs=141.2
Q ss_pred CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+++++++||||++ .||.+++++|.++|++|++..|+. ...+..... .......++++|++|++++.++++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 4578999999997 799999999999999999887763 211111111 111223467899999988887664
Q ss_pred -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
.+|++||++|.... +.....+++|+.++..+++++... .-.++|++||...... ......
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-----~~~~~~ 159 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV-----IPNYNV 159 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC-----CCcccc
Confidence 37999999985321 123457888999888888866421 1148999999766421 123468
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|+.+|+..+.+.+.. ++.+..+.||.+-.+...................|+ ..+...+|+|++++
T Consensus 160 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~~~ 231 (260)
T PRK06603 160 MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL--------KRNTTQEDVGGAAV 231 (260)
T ss_pred hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc--------CCCCCHHHHHHHHH
Confidence 999999999877753 688999999988755211000001111101111221 23578999999999
Q ss_pred HHhcCCC--CCCcEEEEeCCc
Q psy4233 225 AACKDPD--AAGKIYQAVGPK 243 (303)
Q Consensus 225 ~~~~~~~--~~g~~~~i~~~~ 243 (303)
+++..+. ..|+.+.+.++-
T Consensus 232 ~L~s~~~~~itG~~i~vdgG~ 252 (260)
T PRK06603 232 YLFSELSKGVTGEIHYVDCGY 252 (260)
T ss_pred HHhCcccccCcceEEEeCCcc
Confidence 9997532 367777776653
No 244
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.71 E-value=9.4e-16 Score=130.33 Aligned_cols=215 Identities=14% Similarity=0.140 Sum_probs=142.0
Q ss_pred cCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCc--ccccchhcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233 15 SFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFY--DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---- 86 (303)
Q Consensus 15 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 86 (303)
++++++++||||+ +-||.+++++|+++|++|++..|+... ..+.+.......++.++.+|++|++++.++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE 83 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 3567899999997 899999999999999999998775321 11212111112457889999999988877654
Q ss_pred ---ccCEEEEccccCcc---------c---cchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCC
Q psy4233 87 ---YSNVVINLIGREFA---------T---KNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGG 149 (303)
Q Consensus 87 ---~~D~vi~~a~~~~~---------~---~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~ 149 (303)
..|++||++|.... . .....+++|+.+...+++++... .-.+||++||...... ....
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----~~~~ 158 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV-----VQNY 158 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC-----CCCC
Confidence 37999999985321 1 11245677888877777666532 1248999999866431 1234
Q ss_pred CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
..|+.+|...+.+.+.. ++++..+.||.+..+...................|. ..+...+|+|++
T Consensus 159 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~p~~va~~ 230 (257)
T PRK08594 159 NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPL--------RRTTTQEEVGDT 230 (257)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCc--------cccCCHHHHHHH
Confidence 68999999999988753 688999999988765211000000111001111121 235789999999
Q ss_pred HHHHhcCCC--CCCcEEEEeCC
Q psy4233 223 IVAACKDPD--AAGKIYQAVGP 242 (303)
Q Consensus 223 ~~~~~~~~~--~~g~~~~i~~~ 242 (303)
+++++.... ..|+.+.+.++
T Consensus 231 ~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 231 AAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred HHHHcCcccccccceEEEECCc
Confidence 999987432 36777777655
No 245
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.71 E-value=5.5e-16 Score=126.64 Aligned_cols=179 Identities=19% Similarity=0.175 Sum_probs=131.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc---ccCEEEEcc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK---YSNVVINLI 95 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~vi~~a 95 (303)
|+++||||+|.||.+++++|.++ ++|++++|+.. .+.+|++|.++++++++ ++|++||++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a 63 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSAA 63 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence 58999999999999999999999 99999998642 35789999999988776 489999999
Q ss_pred ccCcc--------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh
Q psy4233 96 GREFA--------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR 165 (303)
Q Consensus 96 ~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~ 165 (303)
|.... ......+++|+.++.++++++... +..+|+++||...... ......|+.+|...+.+.+.
T Consensus 64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~-----~~~~~~Y~~sK~a~~~~~~~ 138 (199)
T PRK07578 64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP-----IPGGASAATVNGALEGFVKA 138 (199)
T ss_pred CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC-----CCCchHHHHHHHHHHHHHHH
Confidence 86321 223456788999999999887642 2247999998765431 13346899999999987775
Q ss_pred h------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEEE
Q psy4233 166 E------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQA 239 (303)
Q Consensus 166 ~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i 239 (303)
. ++.+..++||.+-.+... .....+ . ..+++.+|+|+++..+++. ...|++|++
T Consensus 139 la~e~~~gi~v~~i~Pg~v~t~~~~-----------~~~~~~-------~-~~~~~~~~~a~~~~~~~~~-~~~g~~~~~ 198 (199)
T PRK07578 139 AALELPRGIRINVVSPTVLTESLEK-----------YGPFFP-------G-FEPVPAARVALAYVRSVEG-AQTGEVYKV 198 (199)
T ss_pred HHHHccCCeEEEEEcCCcccCchhh-----------hhhcCC-------C-CCCCCHHHHHHHHHHHhcc-ceeeEEecc
Confidence 3 678888999877533110 111111 1 2468999999999999975 345666654
No 246
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.70 E-value=1.4e-15 Score=129.35 Aligned_cols=216 Identities=15% Similarity=0.112 Sum_probs=143.8
Q ss_pred cCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcc--cccch-hcCCCCceEEEecCCCCHHHHHHHhc---
Q psy4233 15 SFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYD--VRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK--- 86 (303)
Q Consensus 15 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~--~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 86 (303)
++++++++||||+ +.||.+++++|+++|++|++..|+.... .+... ......++.++.+|++|++++.++++
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK 82 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence 3567899999986 7999999999999999998876643211 11111 11111346788999999998887654
Q ss_pred ----ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCC
Q psy4233 87 ----YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISG 148 (303)
Q Consensus 87 ----~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~ 148 (303)
.+|++||++|.... +..+..+++|+.++..+.+++... .-.++|++||..... +...
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----~~~~ 157 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-----AIPN 157 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-----CCcc
Confidence 37999999986321 123467889999988888876431 124899999976543 1123
Q ss_pred CCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233 149 GSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA 221 (303)
Q Consensus 149 ~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 221 (303)
...|+.+|...+.+.+.. ++.+..+.||.+..+...................|+ ..+...+|+|.
T Consensus 158 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~~~dva~ 229 (258)
T PRK07370 158 YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPL--------RRTVTQTEVGN 229 (258)
T ss_pred cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCc--------CcCCCHHHHHH
Confidence 467999999999988763 588999999998765321100000111101111121 23678899999
Q ss_pred HHHHHhcCC--CCCCcEEEEeCCc
Q psy4233 222 AIVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 222 ~~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
++.+++..+ ...|+.+.+.++.
T Consensus 230 ~~~fl~s~~~~~~tG~~i~vdgg~ 253 (258)
T PRK07370 230 TAAFLLSDLASGITGQTIYVDAGY 253 (258)
T ss_pred HHHHHhChhhccccCcEEEECCcc
Confidence 999999743 2367777776653
No 247
>KOG2774|consensus
Probab=99.70 E-value=7.7e-16 Score=122.82 Aligned_cols=233 Identities=12% Similarity=0.050 Sum_probs=167.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEee-cCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPY-RGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVI 92 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~-R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi 92 (303)
...+|||||+-|.+|..+++.|..+ |.+.++++ -..+. +... ..--++..|+-|...+.++.-+ +|.+|
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp--~~V~-----~~GPyIy~DILD~K~L~eIVVn~RIdWL~ 115 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP--ANVT-----DVGPYIYLDILDQKSLEEIVVNKRIDWLV 115 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc--hhhc-----ccCCchhhhhhccccHHHhhcccccceee
Confidence 3569999999999999999999875 65444443 22221 1110 1245678899998888887643 99999
Q ss_pred Ecccc---CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC---C----CCCCCchhHHHHHHHHH
Q psy4233 93 NLIGR---EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY---Y----ISGGSQFYRTKYQGEKE 162 (303)
Q Consensus 93 ~~a~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~---~----~~~~~~y~~~K~~~e~~ 162 (303)
|..+. ..+.+-.....+|+.|..|+++.|++++. ++..-|++++||.+.+. | ..|.+.|+.+|..+|-+
T Consensus 116 HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~ 194 (366)
T KOG2774|consen 116 HFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELL 194 (366)
T ss_pred eHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHH
Confidence 98763 34555567889999999999999999998 78888999999874322 1 24678899999999976
Q ss_pred HHh----hCCCEEEEeecceee---CCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--C
Q psy4233 163 VLR----EFPEATIFRPSDMYG---SGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--D 231 (303)
Q Consensus 163 ~~~----~~~~~~ilrp~~~~G---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~ 231 (303)
-+. +++++-.+|.+.++. |+.+...+....+.. +.+....+--.+.. ..+.+.+|+-++++.++..+ .
T Consensus 195 GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtr-lpmmy~~dc~~~~~~~~~a~~~~ 273 (366)
T KOG2774|consen 195 GEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTR-LPMMYDTDCMASVIQLLAADSQS 273 (366)
T ss_pred HHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCcc-CceeehHHHHHHHHHHHhCCHHH
Confidence 655 378999999888876 444433333333332 23333333333333 78899999999999988654 3
Q ss_pred CCCcEEEEeCCcccCHHHHHHHHHHHhc
Q psy4233 232 AAGKIYQAVGPKRYLLSELLDWFHVVMK 259 (303)
Q Consensus 232 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g 259 (303)
.+..+||+. +-.+|-+|+++.+.+.+-
T Consensus 274 lkrr~ynvt-~~sftpee~~~~~~~~~p 300 (366)
T KOG2774|consen 274 LKRRTYNVT-GFSFTPEEIADAIRRVMP 300 (366)
T ss_pred hhhheeeec-eeccCHHHHHHHHHhhCC
Confidence 367799996 466999999999988763
No 248
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.70 E-value=1.9e-15 Score=128.75 Aligned_cols=214 Identities=14% Similarity=0.163 Sum_probs=141.5
Q ss_pred CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+++++++||||++ .||.++++.|+++|++|++..|+. ...+... .....+.+..+.+|++|++++.++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 4578999999985 899999999999999999888762 1111111 11112346788999999998887663
Q ss_pred -ccCEEEEccccCcc-------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233 87 -YSNVVINLIGREFA-------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGS 150 (303)
Q Consensus 87 -~~D~vi~~a~~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~ 150 (303)
.+|++||+||.... +..+..+++|+.+...+.+++... +-.++|++||.+.... .....
T Consensus 83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~-----~~~~~ 157 (262)
T PRK07984 83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----IPNYN 157 (262)
T ss_pred CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC-----CCCcc
Confidence 37999999985321 112245678888887787776431 1148999998765421 12346
Q ss_pred chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233 151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
.|+.+|...+.+.+.. ++++..+.||.+..+...................|. ..+...+|+|.++
T Consensus 158 ~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~~ 229 (262)
T PRK07984 158 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------RRTVTIEDVGNSA 229 (262)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC--------cCCCCHHHHHHHH
Confidence 8999999999888763 688899999988654211000001111101111221 2357889999999
Q ss_pred HHHhcCC--CCCCcEEEEeCCc
Q psy4233 224 VAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 224 ~~~~~~~--~~~g~~~~i~~~~ 243 (303)
++++... ...|+.+.+.++.
T Consensus 230 ~~L~s~~~~~itG~~i~vdgg~ 251 (262)
T PRK07984 230 AFLCSDLSAGISGEVVHVDGGF 251 (262)
T ss_pred HHHcCcccccccCcEEEECCCc
Confidence 9999753 3367777776664
No 249
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.70 E-value=2.1e-15 Score=125.40 Aligned_cols=190 Identities=11% Similarity=0.044 Sum_probs=135.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh---c--ccCEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI---K--YSNVVI 92 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~--~~D~vi 92 (303)
|++++||||+|+||++++++|+++|++|++++|+... .+.+.. .+++++.+|++|.+++.+++ . .+|.||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~-~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAA-LAALQA----LGAEALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHH-HHHHHh----ccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 4689999999999999999999999999999987543 222221 24678999999999888754 2 389999
Q ss_pred EccccCcc----------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCcc-CCCCCCCCCCCCCchhHHHHH
Q psy4233 93 NLIGREFA----------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNA-DPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 93 ~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K~~ 158 (303)
|++|.... ......++.|+.++.++++++... .-.+++++||... ++.. +..+...|+.+|..
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~~~Y~~sK~a 152 (222)
T PRK06953 76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---TGTTGWLYRASKAA 152 (222)
T ss_pred ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---cCCCccccHHhHHH
Confidence 99986411 123568899999999999988641 2247899988654 4321 11223469999999
Q ss_pred HHHHHHhh-----CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC--
Q psy4233 159 GEKEVLRE-----FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD-- 231 (303)
Q Consensus 159 ~e~~~~~~-----~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-- 231 (303)
.+.+++.. +++++.++||++..+... . ...+..++.++.++.++....
T Consensus 153 ~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------------------~--~~~~~~~~~~~~~~~~~~~~~~~ 207 (222)
T PRK06953 153 LNDALRAASLQARHATCIALHPGWVRTDMGG-----------------------A--QAALDPAQSVAGMRRVIAQATRR 207 (222)
T ss_pred HHHHHHHHhhhccCcEEEEECCCeeecCCCC-----------------------C--CCCCCHHHHHHHHHHHHHhcCcc
Confidence 99988875 467888999888755211 0 123677888999888775432
Q ss_pred CCCcEEEEe
Q psy4233 232 AAGKIYQAV 240 (303)
Q Consensus 232 ~~g~~~~i~ 240 (303)
..+..|+..
T Consensus 208 ~~~~~~~~~ 216 (222)
T PRK06953 208 DNGRFFQYD 216 (222)
T ss_pred cCceEEeeC
Confidence 345445443
No 250
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.70 E-value=6.7e-16 Score=148.32 Aligned_cols=192 Identities=14% Similarity=0.070 Sum_probs=142.0
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------- 86 (303)
.+++++++||||+|+||.+++++|+++|++|++++|+.....+.... .....++.++.+|++|.+++.++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 46678999999999999999999999999999999975432221111 1112458899999999999887765
Q ss_pred ccCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 87 YSNVVINLIGREFA----------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 87 ~~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
++|++||+||.... +.....+++|+.++.++++++ ++.+..++|++||.+++... .....|
T Consensus 448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y 522 (657)
T PRK07201 448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA-----PRFSAY 522 (657)
T ss_pred CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----CCcchH
Confidence 48999999996311 123467889999988877665 44566799999999887531 234679
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+.+|...+.+.+.. ++.++.++||.+..+..... .. + .. ...++.+++|+.++.
T Consensus 523 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~-----------~~---~----~~-~~~~~~~~~a~~i~~ 583 (657)
T PRK07201 523 VASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT-----------KR---Y----NN-VPTISPEEAADMVVR 583 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc-----------cc---c----cC-CCCCCHHHHHHHHHH
Confidence 99999999988652 69999999999987643211 00 0 01 235789999999999
Q ss_pred HhcCC
Q psy4233 226 ACKDP 230 (303)
Q Consensus 226 ~~~~~ 230 (303)
.+.++
T Consensus 584 ~~~~~ 588 (657)
T PRK07201 584 AIVEK 588 (657)
T ss_pred HHHhC
Confidence 88643
No 251
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.70 E-value=1.4e-15 Score=129.49 Aligned_cols=213 Identities=14% Similarity=0.138 Sum_probs=141.5
Q ss_pred CCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCC--cccccchhcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 16 FNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNF--YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 16 ~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
+++++++|||| ++.||.+++++|+++|++|++..|... +..+.+. ...+....+.+|++|++++.++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFA--AEFGSDLVFPCDVASDEQIDALFASLGQH 81 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHH--HhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence 45789999996 679999999999999999998765421 1111111 111234568999999998887663
Q ss_pred --ccCEEEEccccCcc-------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCC
Q psy4233 87 --YSNVVINLIGREFA-------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGG 149 (303)
Q Consensus 87 --~~D~vi~~a~~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~ 149 (303)
.+|++||+||.... +..+..+++|+.++..+.+++-.. +-.++|++||..... +....
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-----~~~~~ 156 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----VVPNY 156 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-----CCCCc
Confidence 37999999986321 122346789999998888876542 124899999876642 11234
Q ss_pred CchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 150 SQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 150 ~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
..|+.+|...+.+.+.. ++++..+.||.+-.+...................|+ ..+...+|+|++
T Consensus 157 ~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~r~~~pedva~~ 228 (260)
T PRK06997 157 NTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL--------RRNVTIEEVGNV 228 (260)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc--------cccCCHHHHHHH
Confidence 57999999999888763 688999999988754221100001111001111221 235789999999
Q ss_pred HHHHhcCC--CCCCcEEEEeCCc
Q psy4233 223 IVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 223 ~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
+++++..+ ...|+++.+.++.
T Consensus 229 ~~~l~s~~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 229 AAFLLSDLASGVTGEITHVDSGF 251 (260)
T ss_pred HHHHhCccccCcceeEEEEcCCh
Confidence 99999753 3467788776664
No 252
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.70 E-value=3.7e-15 Score=126.62 Aligned_cols=209 Identities=15% Similarity=0.114 Sum_probs=140.6
Q ss_pred CCCcEEEEEcCCC--hhHHHHHHHHHhCCCeEEEeecCCCc--------ccc--cch--hcCCCCceEEEecCCCCHHHH
Q psy4233 16 FNGVVATVFGASG--YMGSYLCNKLGKQGSQIIIPYRGNFY--------DVR--DLR--LCGDLGQVLFQPYHPRNDDEI 81 (303)
Q Consensus 16 ~~~~~vlVtGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~--------~~~--~~~--~~~~~~~~~~~~~Dl~d~~~~ 81 (303)
+++++++||||+| .||.+++++|+++|++|+++.|.... ... ... ......++.++.+|++|.+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4578999999995 79999999999999999887543111 000 100 111123578899999999888
Q ss_pred HHHhc-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCC
Q psy4233 82 RKAIK-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPP 142 (303)
Q Consensus 82 ~~~~~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~ 142 (303)
.+++. .+|++||++|.... +..+..+++|+.+...+.+++ ++.+-.+||++||.....
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--- 160 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG--- 160 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC---
Confidence 87664 26999999986321 123356888999888876544 333345999999987653
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCcee
Q psy4233 143 TYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVY 215 (303)
Q Consensus 143 ~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 215 (303)
+......|+.+|..++.+.+.. +++++.++||.+..+... ...... .....+ . ..+..
T Consensus 161 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~--~~~~~~---~~~~~~-------~-~~~~~ 225 (256)
T PRK12859 161 --PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT--EEIKQG---LLPMFP-------F-GRIGE 225 (256)
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC--HHHHHH---HHhcCC-------C-CCCcC
Confidence 2234578999999999887653 689999999988765322 111110 111111 1 23567
Q ss_pred HHHHHHHHHHHhcCC--CCCCcEEEEeCC
Q psy4233 216 VGDVAAAIVAACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 216 ~~Dva~~~~~~~~~~--~~~g~~~~i~~~ 242 (303)
.+|+|++++.++... ...|+.+.+.++
T Consensus 226 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 226 PKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred HHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 899999999988643 236777776654
No 253
>PRK05855 short chain dehydrogenase; Validated
Probab=99.69 E-value=4.2e-16 Score=147.52 Aligned_cols=207 Identities=17% Similarity=0.094 Sum_probs=141.1
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchh-cCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIKY----- 87 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 87 (303)
..+..++++||||+|+||++++++|.++|++|++++|+.....+.... .....++.++.+|++|++++.++++.
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 446678999999999999999999999999999999975432221111 11123588999999999988877653
Q ss_pred --cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHH----hcC-CceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 88 --SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSK----EMG-VEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 88 --~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
+|++||+||.... +.....+++|+.++.++.+++. +.+ -.+||++||...+... .....|
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y 465 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS-----RSLPAY 465 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-----CCCcHH
Confidence 7999999997321 2334677899999998888753 333 2489999999887632 345789
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHH---HHHHh-hhcceeeecCCCceeeCceeHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYG---HMWRH-VFRKLAVYKKGEETIKQPVYVGDVAA 221 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~ 221 (303)
+.+|...+.+.+.. |++++.++||.+-.+......... ..... .......+ . ......+|+|+
T Consensus 466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~p~~va~ 539 (582)
T PRK05855 466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY----Q--RRGYGPEKVAK 539 (582)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc----c--ccCCCHHHHHH
Confidence 99999988877652 789999999988765322110000 00000 00000000 0 11256899999
Q ss_pred HHHHHhcCCC
Q psy4233 222 AIVAACKDPD 231 (303)
Q Consensus 222 ~~~~~~~~~~ 231 (303)
+++.++.++.
T Consensus 540 ~~~~~~~~~~ 549 (582)
T PRK05855 540 AIVDAVKRNK 549 (582)
T ss_pred HHHHHHHcCC
Confidence 9999998644
No 254
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.69 E-value=2.2e-15 Score=127.95 Aligned_cols=213 Identities=12% Similarity=-0.011 Sum_probs=140.2
Q ss_pred CCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCC-cccccchhcCCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNF-YDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
+++++++|||| ++.||.+++++|+++|++|+++.|+.. +..+.+.... ..++.++.+|+.|++++.++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 45689999999 899999999999999999999887642 2222221111 1257789999999988877653
Q ss_pred -ccCEEEEccccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 87 -YSNVVINLIGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 -~~D~vi~~a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
++|++||+||.... +.....+++|+.++..+.+++... .-.++|++|+....+ ......
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~------~~~~~~ 157 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA------WPAYDW 157 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc------CCccch
Confidence 38999999986421 112346889999888888776431 124789888653221 122356
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHH
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIV 224 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 224 (303)
|+.+|...+.+.+.. ++++..+.||.+..+...................|+ . +.+...+|+|++++
T Consensus 158 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~-~~~~~p~evA~~v~ 230 (256)
T PRK07889 158 MGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL------G-WDVKDPTPVARAVV 230 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc------c-cccCCHHHHHHHHH
Confidence 899999999887663 688999999988765321100000010001111221 0 13578999999999
Q ss_pred HHhcCC--CCCCcEEEEeCC
Q psy4233 225 AACKDP--DAAGKIYQAVGP 242 (303)
Q Consensus 225 ~~~~~~--~~~g~~~~i~~~ 242 (303)
+++... ...|+++.+.++
T Consensus 231 ~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 231 ALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred HHhCcccccccceEEEEcCc
Confidence 999753 236777777655
No 255
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.68 E-value=6.7e-16 Score=134.96 Aligned_cols=168 Identities=15% Similarity=0.058 Sum_probs=121.5
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCCHHHHHHHhc----
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRNDDEIRKAIK---- 86 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 86 (303)
.++++++++||||||.||.+++++|+++|++|+++.|+.....+... ......+++++.+|+.|.+++.++++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999997543222111 11111358899999999998887654
Q ss_pred ---ccCEEEEccccCcc-------ccchhhhhhhcchHHHHHHHHHh---cCCceEEEEecCccCCCC-------CCCCC
Q psy4233 87 ---YSNVVINLIGREFA-------TKNFTIADANVEIPARLARLSKE---MGVEKFIHISALNADPNP-------PTYYI 146 (303)
Q Consensus 87 ---~~D~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~~Ss~~~~~~~-------~~~~~ 146 (303)
.+|++||+||.... +..+..+.+|+.+...+.+.+.. .+..++|++||....... ...+.
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~ 169 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSY 169 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccC
Confidence 37999999996322 23345788899998777776642 233589999998654321 11223
Q ss_pred CCCCchhHHHHHHHHHHHhh---------CCCEEEEeecceeeC
Q psy4233 147 SGGSQFYRTKYQGEKEVLRE---------FPEATIFRPSDMYGS 181 (303)
Q Consensus 147 ~~~~~y~~~K~~~e~~~~~~---------~~~~~ilrp~~~~G~ 181 (303)
.+...|+.+|...+.+.++. ++.+..+.||.+..+
T Consensus 170 ~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 170 AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 44568999999998877543 478888999988754
No 256
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.68 E-value=2.3e-15 Score=138.15 Aligned_cols=210 Identities=14% Similarity=0.120 Sum_probs=143.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
+.+++++||||+|.||..+++.|.++|++|++++|+.... ....... -+.+.+.+|++|.+++.++++ +
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR---VGGTALALDITAPDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH---cCCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence 4578999999999999999999999999999998853221 1111111 134678999999988877654 4
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCC----ceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGV----EKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
+|+|||++|.... ......+++|+.++.++.+++..... .+||++||...+... .....|+.+
T Consensus 285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-----~~~~~Y~as 359 (450)
T PRK08261 285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-----RGQTNYAAS 359 (450)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----CCChHHHHH
Confidence 7999999996422 23346788999999999999876432 589999998765321 234789999
Q ss_pred HHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|...+.+++.. ++.+..+.||.+-.+....... .......... .. ......+|+|+++++++.
T Consensus 360 Kaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~---~~~~~~~~~~------~l-~~~~~p~dva~~~~~l~s 429 (450)
T PRK08261 360 KAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF---ATREAGRRMN------SL-QQGGLPVDVAETIAWLAS 429 (450)
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch---hHHHHHhhcC------Cc-CCCCCHHHHHHHHHHHhC
Confidence 99777766553 6889999999875432111111 0111111110 01 223557899999999987
Q ss_pred CC--CCCCcEEEEeCCc
Q psy4233 229 DP--DAAGKIYQAVGPK 243 (303)
Q Consensus 229 ~~--~~~g~~~~i~~~~ 243 (303)
.. ...|+++.++++.
T Consensus 430 ~~~~~itG~~i~v~g~~ 446 (450)
T PRK08261 430 PASGGVTGNVVRVCGQS 446 (450)
T ss_pred hhhcCCCCCEEEECCCc
Confidence 43 2368888887654
No 257
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.2e-15 Score=127.18 Aligned_cols=158 Identities=16% Similarity=0.076 Sum_probs=117.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----ccCEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-----YSNVVI 92 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vi 92 (303)
|++++||||+|++|++++++|+++|++|++++|+..... .+.. ..++.++.+|++|.+++.++++ ++|+||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT-ALQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH-HHHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 468999999999999999999999999999999864422 1211 2457888999999988887665 389999
Q ss_pred EccccCcc----------ccchhhhhhhcchHHHHHHHHHhc---CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233 93 NLIGREFA----------TKNFTIADANVEIPARLARLSKEM---GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG 159 (303)
Q Consensus 93 ~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~ 159 (303)
|++|.... ......+.+|+.++..+++++... +...++++||...... ..+......|+.+|...
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~--~~~~~~~~~Y~~sK~a~ 154 (225)
T PRK08177 77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVE--LPDGGEMPLYKASKAAL 154 (225)
T ss_pred EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccc--cCCCCCccchHHHHHHH
Confidence 99986321 122356788999999988887542 2247888887543221 11223445799999999
Q ss_pred HHHHHhh-------CCCEEEEeecceeeC
Q psy4233 160 EKEVLRE-------FPEATIFRPSDMYGS 181 (303)
Q Consensus 160 e~~~~~~-------~~~~~ilrp~~~~G~ 181 (303)
+.+++.. ++.+..++||.+-.+
T Consensus 155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 155 NSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 9988764 477888999988655
No 258
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.68 E-value=2.1e-15 Score=130.15 Aligned_cols=212 Identities=15% Similarity=0.132 Sum_probs=142.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC--------ccccc-ch-hcCCCCceEEEecCCCCHHHHHHHh
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF--------YDVRD-LR-LCGDLGQVLFQPYHPRNDDEIRKAI 85 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~--------~~~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~ 85 (303)
+++++++||||++.||.+++++|+++|++|+++.|+.. +.... .. ......++.++.+|++|.+++.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 45789999999999999999999999999999887541 11111 11 1111235788999999998877655
Q ss_pred c-------ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHh----c---C---CceEEEEecCccCCC
Q psy4233 86 K-------YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKE----M---G---VEKFIHISALNADPN 140 (303)
Q Consensus 86 ~-------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~----~---~---~~~~v~~Ss~~~~~~ 140 (303)
+ .+|++||+||.... +..+..+++|+.++..+++++.. . + ..+||++||......
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 163 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG 163 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence 3 37999999996321 23456889999999888877642 1 1 148999999766532
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCc
Q psy4233 141 PPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQP 213 (303)
Q Consensus 141 ~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (303)
. .....|+.+|...+.+.+.. ++++..+.|+ +..+... .....+. ...+ ... ..+
T Consensus 164 ~-----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~--~~~~~~~----~~~~-----~~~-~~~ 225 (286)
T PRK07791 164 S-----VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE--TVFAEMM----AKPE-----EGE-FDA 225 (286)
T ss_pred C-----CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch--hhHHHHH----hcCc-----ccc-cCC
Confidence 1 23468999999999887663 6889999997 4322111 1111111 0111 111 235
Q ss_pred eeHHHHHHHHHHHhcCC--CCCCcEEEEeCCccc
Q psy4233 214 VYVGDVAAAIVAACKDP--DAAGKIYQAVGPKRY 245 (303)
Q Consensus 214 i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~~~ 245 (303)
...+|+|+++++++... ...|+.+.+.++...
T Consensus 226 ~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~ 259 (286)
T PRK07791 226 MAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS 259 (286)
T ss_pred CCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence 78999999999998743 347878888766543
No 259
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.68 E-value=1.5e-15 Score=135.62 Aligned_cols=183 Identities=16% Similarity=0.052 Sum_probs=124.2
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
.++++++++||||+|+||++++++|.++|++|++++|+..+...... ....+++.+.+|++|.+++.+.+.++|++||
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~--~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn 251 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN--GEDLPVKTLHWQVGQEAALAELLEKVDILII 251 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--hcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence 45678899999999999999999999999999999987543221111 1112467889999999999999999999999
Q ss_pred ccccCcc-----ccchhhhhhhcchHHHHHHHHHh----cCC---c-eEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233 94 LIGREFA-----TKNFTIADANVEIPARLARLSKE----MGV---E-KFIHISALNADPNPPTYYISGGSQFYRTKYQGE 160 (303)
Q Consensus 94 ~a~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~----~~~---~-~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e 160 (303)
+||.... +.....+++|+.++.++++++.. .+. + .+|.+|+.. .. | .....|+.+|...+
T Consensus 252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~-----~-~~~~~Y~ASKaAl~ 324 (406)
T PRK07424 252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-VN-----P-AFSPLYELSKRALG 324 (406)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-cc-----C-CCchHHHHHHHHHH
Confidence 9986321 23356889999999999998742 221 2 345554422 11 1 11246999999998
Q ss_pred HHHHh--h--CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233 161 KEVLR--E--FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD 231 (303)
Q Consensus 161 ~~~~~--~--~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 231 (303)
.+... . +..+..+.| ||..... .. ...++.+|+|+.++.+++++.
T Consensus 325 ~l~~l~~~~~~~~I~~i~~----gp~~t~~---------------------~~-~~~~spe~vA~~il~~i~~~~ 373 (406)
T PRK07424 325 DLVTLRRLDAPCVVRKLIL----GPFKSNL---------------------NP-IGVMSADWVAKQILKLAKRDF 373 (406)
T ss_pred HHHHHHHhCCCCceEEEEe----CCCcCCC---------------------Cc-CCCCCHHHHHHHHHHHHHCCC
Confidence 86432 2 222333333 4422110 00 124789999999999998654
No 260
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.67 E-value=3.4e-15 Score=125.75 Aligned_cols=180 Identities=12% Similarity=0.032 Sum_probs=122.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
+++++++||||+|+||++++++|+++|++|++++|+..+..... .. .....+.+|++|.+++.+.+.++|++||+|
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnA 87 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN---DE-SPNEWIKWECGKEESLDKQLASLDVLILNH 87 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh---cc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence 35679999999999999999999999999999998752221111 11 113678899999999999998999999999
Q ss_pred ccCc-----cccchhhhhhhcchHHHHHHHHHhc-------CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHH
Q psy4233 96 GREF-----ATKNFTIADANVEIPARLARLSKEM-------GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEV 163 (303)
Q Consensus 96 ~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~ 163 (303)
|... .+.....+++|+.++.++++++... +-..++..||...... .....|+.+|...+.+.
T Consensus 88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~------~~~~~Y~aSKaal~~~~ 161 (245)
T PRK12367 88 GINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP------ALSPSYEISKRLIGQLV 161 (245)
T ss_pred ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC------CCCchhHHHHHHHHHHH
Confidence 8632 2334578899999999999977432 1123444454433321 12357999999975332
Q ss_pred ---Hh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233 164 ---LR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD 231 (303)
Q Consensus 164 ---~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 231 (303)
++ .++.+..+.||.+..+. . + ...+..+|+|+.++.++.++.
T Consensus 162 ~l~~~l~~e~~~~~i~v~~~~pg~~~t~~-------------~----~---------~~~~~~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 162 SLKKNLLDKNERKKLIIRKLILGPFRSEL-------------N----P---------IGIMSADFVAKQILDQANLGL 213 (245)
T ss_pred HHHHHHHHhhcccccEEEEecCCCccccc-------------C----c---------cCCCCHHHHHHHHHHHHhcCC
Confidence 11 24555556665432110 0 0 124788999999999997643
No 261
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.67 E-value=1.1e-14 Score=122.16 Aligned_cols=195 Identities=15% Similarity=0.112 Sum_probs=131.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh---cccCEEEE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI---KYSNVVIN 93 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~D~vi~ 93 (303)
|+|+||||+|+||++++++|+++| ..|....|..... . ..+++.++++|++|.+++.++. .++|+|||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~----~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~ 73 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---F----QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN 73 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---c----ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 589999999999999999999985 5666666643321 1 1246889999999998877654 45899999
Q ss_pred ccccCccc--------------cchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 94 LIGREFAT--------------KNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 94 ~a~~~~~~--------------~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
++|..... .....+++|+.++..+.+++.. .+..+++++||....-... +..+...|+.+
T Consensus 74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~--~~~~~~~Y~as 151 (235)
T PRK09009 74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDN--RLGGWYSYRAS 151 (235)
T ss_pred CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccC--CCCCcchhhhh
Confidence 99974211 1124677888888777776643 3345899988753311111 12344689999
Q ss_pred HHHHHHHHHhh---------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 156 KYQGEKEVLRE---------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 156 K~~~e~~~~~~---------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
|+.++.+.+.. ++.+..+.||.+..+..... . ...+ . ..++..+|+|++++.+
T Consensus 152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~---------~-~~~~-------~-~~~~~~~~~a~~~~~l 213 (235)
T PRK09009 152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF---------Q-QNVP-------K-GKLFTPEYVAQCLLGI 213 (235)
T ss_pred HHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch---------h-hccc-------c-CCCCCHHHHHHHHHHH
Confidence 99999988763 35677788988876643210 0 1111 1 2357899999999999
Q ss_pred hcCCC--CCCcEEEEe
Q psy4233 227 CKDPD--AAGKIYQAV 240 (303)
Q Consensus 227 ~~~~~--~~g~~~~i~ 240 (303)
+.... ..|..+.+.
T Consensus 214 ~~~~~~~~~g~~~~~~ 229 (235)
T PRK09009 214 IANATPAQSGSFLAYD 229 (235)
T ss_pred HHcCChhhCCcEEeeC
Confidence 98643 356555443
No 262
>PRK06484 short chain dehydrogenase; Validated
Probab=99.66 E-value=6.6e-15 Score=137.67 Aligned_cols=210 Identities=14% Similarity=0.115 Sum_probs=142.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
.+++++||||++.||.+++++|+++|++|+++.|+.....+.....+ .++..+.+|++|++++.++++ .+|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG--PDHHALAMDVSDEAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 46799999999999999999999999999999997543322222111 357789999999988877664 389
Q ss_pred EEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHhc----CCc-eEEEEecCccCCCCCCCCCCCCCchhH
Q psy4233 90 VVINLIGREFA----------TKNFTIADANVEIPARLARLSKEM----GVE-KFIHISALNADPNPPTYYISGGSQFYR 154 (303)
Q Consensus 90 ~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~----~~~-~~v~~Ss~~~~~~~~~~~~~~~~~y~~ 154 (303)
++||+||.... ...+..+++|+.++..+++++... +.. ++|++||....... .....|+.
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-----~~~~~Y~a 156 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-----PKRTAYSA 156 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC-----CCCchHHH
Confidence 99999986211 223568899999999988877543 333 89999998765421 23468999
Q ss_pred HHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHH-HHhhhcceeeecCCCceeeCceeHHHHHHHHHHH
Q psy4233 155 TKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHM-WRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAA 226 (303)
Q Consensus 155 ~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 226 (303)
+|...+.+.+.. +++++.+.||.+..+.......-... .......++. ..+...+|+|++++.+
T Consensus 157 sKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~v~~l 228 (520)
T PRK06484 157 SKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPL--------GRLGRPEEIAEAVFFL 228 (520)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCC--------CCCcCHHHHHHHHHHH
Confidence 999999887653 68899999998865532110000000 0000111111 1356889999999998
Q ss_pred hcCC--CCCCcEEEEeC
Q psy4233 227 CKDP--DAAGKIYQAVG 241 (303)
Q Consensus 227 ~~~~--~~~g~~~~i~~ 241 (303)
+... ...|+.+.+.+
T Consensus 229 ~~~~~~~~~G~~~~~~g 245 (520)
T PRK06484 229 ASDQASYITGSTLVVDG 245 (520)
T ss_pred hCccccCccCceEEecC
Confidence 8742 22455554443
No 263
>KOG1205|consensus
Probab=99.65 E-value=3.5e-15 Score=125.22 Aligned_cols=149 Identities=21% Similarity=0.237 Sum_probs=112.0
Q ss_pred cccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccc---ccchhcCCCCceEEEecCCCCHHHHHHHh----
Q psy4233 13 RSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDV---RDLRLCGDLGQVLFQPYHPRNDDEIRKAI---- 85 (303)
Q Consensus 13 ~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---- 85 (303)
++.+.++.|+|||||..||.+++.+|.++|.+++.+.|+..... ++++.....+++.++++|++|.+++.+.+
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence 34467899999999999999999999999998877777644321 22222222236999999999999888554
Q ss_pred ---cccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCC
Q psy4233 86 ---KYSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGS 150 (303)
Q Consensus 86 ---~~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~ 150 (303)
.+.|++||+||.... ......+++|+.|+..+.+++ ++.+-.|||.+||+..+-. .....
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~-----~P~~~ 161 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP-----LPFRS 161 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC-----CCccc
Confidence 458999999996321 233468999999998888877 3444459999999988763 12224
Q ss_pred chhHHHHHHHHHHHhh
Q psy4233 151 QFYRTKYQGEKEVLRE 166 (303)
Q Consensus 151 ~y~~~K~~~e~~~~~~ 166 (303)
.|+.||.+.+.+....
T Consensus 162 ~Y~ASK~Al~~f~etL 177 (282)
T KOG1205|consen 162 IYSASKHALEGFFETL 177 (282)
T ss_pred ccchHHHHHHHHHHHH
Confidence 8999999999988764
No 264
>KOG4288|consensus
Probab=99.65 E-value=1.3e-15 Score=121.00 Aligned_cols=205 Identities=20% Similarity=0.202 Sum_probs=153.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
.+.++.|++||.|+++++...+.++.|-.+.|+..+.... .+...+.++.+|.....-++..+.++..++.+++..
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~----sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf 128 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLS----SWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF 128 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhh----CCCcccchhhccccccCcchhhhcCCcccHHHhcCc
Confidence 3689999999999999999999999999999986532221 223558889999988887888888999999998763
Q ss_pred ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHh-hCCCEEEEeecc
Q psy4233 99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLR-EFPEATIFRPSD 177 (303)
Q Consensus 99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-~~~~~~ilrp~~ 177 (303)
.+...+..+|-....+-++++.++|+++|+|+|.... +-. | .....|...|+++|..+.. ++.+-+++|||.
T Consensus 129 --gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~-~~~---~-~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGF 201 (283)
T KOG4288|consen 129 --GNIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF-GLP---P-LIPRGYIEGKREAEAELLKKFRFRGIILRPGF 201 (283)
T ss_pred --cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc-CCC---C-ccchhhhccchHHHHHHHHhcCCCceeeccce
Confidence 3455688889999999999999999999999995433 211 1 2235899999999976655 689999999999
Q ss_pred eeeCCC-----chhhHHHHHHHh-------hhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCCCCCcEEE
Q psy4233 178 MYGSGD-----KFLRYYGHMWRH-------VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPDAAGKIYQ 238 (303)
Q Consensus 178 ~~G~~~-----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~ 238 (303)
+||-+. .++..+...+.. ....+|+.+ .....++.+++||.+.+.+++++...| ++.
T Consensus 202 iyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg---~l~~ppvnve~VA~aal~ai~dp~f~G-vv~ 270 (283)
T KOG4288|consen 202 IYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLG---PLLAPPVNVESVALAALKAIEDPDFKG-VVT 270 (283)
T ss_pred eecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccc---cccCCCcCHHHHHHHHHHhccCCCcCc-eee
Confidence 999532 123333332222 122344442 233678999999999999999887765 443
No 265
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.64 E-value=5.8e-15 Score=125.45 Aligned_cols=197 Identities=16% Similarity=0.060 Sum_probs=131.1
Q ss_pred EEEEEcCCChhHHHHHHHHHh----CCCeEEEeecCCCcccccchhcC---CCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233 20 VATVFGASGYMGSYLCNKLGK----QGSQIIIPYRGNFYDVRDLRLCG---DLGQVLFQPYHPRNDDEIRKAIKY----- 87 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~----- 87 (303)
.++||||+|.||.+++++|++ .|++|+++.|+.....+...... ...++.++.+|++|.+++.++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999999999999999997 79999999997543222111111 123588899999999988876643
Q ss_pred ------cCEEEEccccCcc-----------ccchhhhhhhcchHHHHHHHHHh----c-C-CceEEEEecCccCCCCCCC
Q psy4233 88 ------SNVVINLIGREFA-----------TKNFTIADANVEIPARLARLSKE----M-G-VEKFIHISALNADPNPPTY 144 (303)
Q Consensus 88 ------~D~vi~~a~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~----~-~-~~~~v~~Ss~~~~~~~~~~ 144 (303)
.|++||+||.... +.....+++|+.++..+.+++.. . + ..++|++||......
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~---- 157 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP---- 157 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC----
Confidence 2589999985211 12235788999998877766543 2 2 248999999876532
Q ss_pred CCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchh-hH--HHHHHHhhhcceeeecCCCceeeCce
Q psy4233 145 YISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFL-RY--YGHMWRHVFRKLAVYKKGEETIKQPV 214 (303)
Q Consensus 145 ~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 214 (303)
......|+.+|...+.+.+.. ++.+..+.||++-.+..... .. -...........|. ..+.
T Consensus 158 -~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 228 (256)
T TIGR01500 158 -FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAK--------GKLV 228 (256)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhc--------CCCC
Confidence 223467999999999888763 57888899998865421100 00 00000000011111 2368
Q ss_pred eHHHHHHHHHHHhcC
Q psy4233 215 YVGDVAAAIVAACKD 229 (303)
Q Consensus 215 ~~~Dva~~~~~~~~~ 229 (303)
..+|+|.+++.++++
T Consensus 229 ~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 229 DPKVSAQKLLSLLEK 243 (256)
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999999963
No 266
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.63 E-value=8.5e-15 Score=116.78 Aligned_cols=155 Identities=14% Similarity=0.082 Sum_probs=116.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccc---h-hcCCCCceEEEecCCCCHHHHHHHhcc------
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDL---R-LCGDLGQVLFQPYHPRNDDEIRKAIKY------ 87 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~---~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 87 (303)
++++||||+|++|.+++++|+++|. .|+++.|+........ . ......++.++.+|+++.+++.+.+..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999995 6888888654322110 1 111124578899999999888776543
Q ss_pred -cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 88 -SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 88 -~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
+|.|||+++.... ...+..++.|+.++.++++++++.+.++++++||....... .....|+.+|..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~-----~~~~~y~~sk~~ 155 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN-----PGQANYAAANAF 155 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC-----CCchhhHHHHHH
Confidence 5999999985321 22346788999999999999988887899999997664321 234689999999
Q ss_pred HHHHHHhh---CCCEEEEeecce
Q psy4233 159 GEKEVLRE---FPEATIFRPSDM 178 (303)
Q Consensus 159 ~e~~~~~~---~~~~~ilrp~~~ 178 (303)
.+.+++.. +++.+.+.||.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 156 LDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred HHHHHHHHHhcCCceEEEeeccc
Confidence 99988653 788888888765
No 267
>KOG3019|consensus
Probab=99.63 E-value=4.3e-15 Score=117.84 Aligned_cols=238 Identities=12% Similarity=0.086 Sum_probs=163.0
Q ss_pred CcEEEEEcCCChhHHHHHH-----HHHhCC----CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhccc
Q psy4233 18 GVVATVFGASGYMGSYLCN-----KLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~-----~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (303)
..+.+.-+++|+|+..|.. .+-+.+ |+|++++|++.. .++.+.+.|..-.. -.|
T Consensus 12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~-----------~ritw~el~~~Gip------~sc 74 (315)
T KOG3019|consen 12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGK-----------ARITWPELDFPGIP------ISC 74 (315)
T ss_pred cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCC-----------cccccchhcCCCCc------eeh
Confidence 3456777899999987776 232333 899999998653 23444444443221 135
Q ss_pred CEEEEcccc--------CccccchhhhhhhcchHHHHHHHHHhcC--CceEEEEecCccCCCCC------CCCCCCCCch
Q psy4233 89 NVVINLIGR--------EFATKNFTIADANVEIPARLARLSKEMG--VEKFIHISALNADPNPP------TYYISGGSQF 152 (303)
Q Consensus 89 D~vi~~a~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~------~~~~~~~~~y 152 (303)
|+.++++|. +.+.-.+......++.+..|+++..+++ .+.+|.+|.+++|-..+ +.+....+..
T Consensus 75 ~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~ 154 (315)
T KOG3019|consen 75 VAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDIL 154 (315)
T ss_pred HHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHH
Confidence 555555553 2222233455667788899999999886 45899999999986532 2222222222
Q ss_pred hH--HHHHHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC
Q psy4233 153 YR--TKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 153 ~~--~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 230 (303)
.+ .+++.......-..+.+++|.|.+.|.+.+....+...++. ..=--.|+|.+. +.|||++|++..|.++++++
T Consensus 155 srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~--g~GGPlGsG~Q~-fpWIHv~DL~~li~~ale~~ 231 (315)
T KOG3019|consen 155 SRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQM--GAGGPLGSGQQW-FPWIHVDDLVNLIYEALENP 231 (315)
T ss_pred HHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhh--ccCCcCCCCCee-eeeeehHHHHHHHHHHHhcC
Confidence 22 12222222212248999999999999987654443322221 111224788888 99999999999999999988
Q ss_pred CCCCcEEEEeCCcccCHHHHHHHHHHHhcCCCCCcccccccCCCCChhhHHHHhh
Q psy4233 231 DAAGKIYQAVGPKRYLLSELLDWFHVVMKKGEPDYGYYRYDLRYDPVMPLKLFIN 285 (303)
Q Consensus 231 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~p~~~~~~~l~ 285 (303)
..+| +.|-..+++.+..|+.+.+.++++++.- +| +|.+..++.++
T Consensus 232 ~v~G-ViNgvAP~~~~n~Ef~q~lg~aL~Rp~~--------~p-vP~fvvqA~fG 276 (315)
T KOG3019|consen 232 SVKG-VINGVAPNPVRNGEFCQQLGSALSRPSW--------LP-VPDFVVQALFG 276 (315)
T ss_pred CCCc-eecccCCCccchHHHHHHHHHHhCCCcc--------cC-CcHHHHHHHhC
Confidence 7777 9999999999999999999999999988 88 99999888776
No 268
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.62 E-value=5.8e-14 Score=122.80 Aligned_cols=203 Identities=12% Similarity=0.086 Sum_probs=131.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
+++++||||++.||.+++++|+++| ++|++++|+.....+...... ...+++++.+|++|.+++.++++ ++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 6789999999999999999999999 999999987543221111111 11357889999999988876553 48
Q ss_pred CEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcC--CceEEEEecCccCCCC------------
Q psy4233 89 NVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMG--VEKFIHISALNADPNP------------ 141 (303)
Q Consensus 89 D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~~v~~Ss~~~~~~~------------ 141 (303)
|++||+||.... +..+..+++|+.++..+++++. +.+ ..+||++||...+...
T Consensus 83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~ 162 (314)
T TIGR01289 83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLG 162 (314)
T ss_pred CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccc
Confidence 999999996321 1224578899999888766553 332 3599999998764210
Q ss_pred ----------------CCCCCCCCCchhHHHHHHHHHHHhh--------CCCEEEEeeccee-eCCC-chhhHHHHHHHh
Q psy4233 142 ----------------PTYYISGGSQFYRTKYQGEKEVLRE--------FPEATIFRPSDMY-GSGD-KFLRYYGHMWRH 195 (303)
Q Consensus 142 ----------------~~~~~~~~~~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~-G~~~-~~~~~~~~~~~~ 195 (303)
+..+..+...|+.+|.....+.+.. ++.++.++||++. .+.. ........+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~ 242 (314)
T TIGR01289 163 DLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPP 242 (314)
T ss_pred ccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHH
Confidence 0012234467999999966544332 5778889999885 2221 111111111100
Q ss_pred hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 196 VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
..+.. . ..+.+.++.|+.++.++..
T Consensus 243 ~~~~~-------~--~~~~~~~~~a~~l~~~~~~ 267 (314)
T TIGR01289 243 FQKYI-------T--KGYVSEEEAGERLAQVVSD 267 (314)
T ss_pred HHHHH-------h--ccccchhhhhhhhHHhhcC
Confidence 00001 0 1257899999999998765
No 269
>PRK05599 hypothetical protein; Provisional
Probab=99.60 E-value=5.7e-14 Score=118.62 Aligned_cols=194 Identities=14% Similarity=0.107 Sum_probs=129.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
|+++||||++.||.+++++|. +|++|++++|+.....+..+... ...++.++.+|+.|.+++.++++ +.|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999998 59999999997543322111111 11347889999999988876543 379
Q ss_pred EEEEccccCccc-----c---chhhhhhhcchHHHHHHH----HHhcC-CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 90 VVINLIGREFAT-----K---NFTIADANVEIPARLARL----SKEMG-VEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 90 ~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~~----~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
++||++|..... . .....++|+.+...++++ +.+.+ -.++|++||...... ......|+.+|
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~asK 154 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA-----RRANYVYGSTK 154 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC-----CcCCcchhhHH
Confidence 999999964221 1 123455677666655444 33332 358999999866532 12346899999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
...+.+.+.. ++.+..+.||.+..+... ..... . . ....+|+|++++.++..
T Consensus 155 aa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~-----------~~~~~--------~-~-~~~pe~~a~~~~~~~~~ 213 (246)
T PRK05599 155 AGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT-----------GMKPA--------P-M-SVYPRDVAAAVVSAITS 213 (246)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc-----------CCCCC--------C-C-CCCHHHHHHHHHHHHhc
Confidence 9998877653 578888999888754211 00000 0 0 25789999999999986
Q ss_pred CCCCCcEEEEe
Q psy4233 230 PDAAGKIYQAV 240 (303)
Q Consensus 230 ~~~~g~~~~i~ 240 (303)
+.. +..+.+.
T Consensus 214 ~~~-~~~~~~~ 223 (246)
T PRK05599 214 SKR-STTLWIP 223 (246)
T ss_pred CCC-CceEEeC
Confidence 543 3344443
No 270
>KOG1201|consensus
Probab=99.58 E-value=1.1e-13 Score=115.26 Aligned_cols=197 Identities=14% Similarity=0.100 Sum_probs=143.9
Q ss_pred CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
++.+.++..||||||.+.+|+.++.+++++|.++.+.+.+.....+..+......++..+.+|++|.+++.+..+
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 556788999999999999999999999999998989888876665554443322368999999999988876553
Q ss_pred --ccCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 87 --YSNVVINLIGREFA--------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 87 --~~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
.+|++||+||.... +.-+..+++|+.+.....++. .+.+-.++|.++|....-.. ....+|
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~-----~gl~~Y 186 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP-----AGLADY 186 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC-----ccchhh
Confidence 38999999996222 233468888888777666654 44455699999998776531 334789
Q ss_pred hHHHHHHHHHHHhh----------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE----------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 153 ~~~K~~~e~~~~~~----------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
+.||..+....+.. +++.+.+.|+.+-.. .+ .+ ..+ .......+..+.+|+.
T Consensus 187 caSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg------mf------~~-~~~-----~~~l~P~L~p~~va~~ 248 (300)
T KOG1201|consen 187 CASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG------MF------DG-ATP-----FPTLAPLLEPEYVAKR 248 (300)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc------cc------CC-CCC-----CccccCCCCHHHHHHH
Confidence 99999988766542 477888888766411 11 11 111 1222678999999999
Q ss_pred HHHHhcCCC
Q psy4233 223 IVAACKDPD 231 (303)
Q Consensus 223 ~~~~~~~~~ 231 (303)
++.++..++
T Consensus 249 Iv~ai~~n~ 257 (300)
T KOG1201|consen 249 IVEAILTNQ 257 (300)
T ss_pred HHHHHHcCC
Confidence 999998654
No 271
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.58 E-value=9.4e-14 Score=120.83 Aligned_cols=205 Identities=17% Similarity=0.164 Sum_probs=130.9
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc---------ccccch-h-cCCCCceEEEecCCCCHHHHHH
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY---------DVRDLR-L-CGDLGQVLFQPYHPRNDDEIRK 83 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~---------~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~ 83 (303)
++++++++||||++.||.+++++|++.|++|+++.|+... ..+... . .....++.++++|++|++++.+
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 3567899999999999999999999999999999987421 111111 1 1111347789999999988887
Q ss_pred Hhc-------ccCEEEEcc-ccC------cc------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCC
Q psy4233 84 AIK-------YSNVVINLI-GRE------FA------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADP 139 (303)
Q Consensus 84 ~~~-------~~D~vi~~a-~~~------~~------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~ 139 (303)
+++ .+|++||++ |.. .. ......+++|+.+...+++++-. .+-.+||++||.....
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~ 164 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY 164 (305)
T ss_pred HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence 653 379999999 631 00 11224567788887777766532 3335899999865422
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHH---HHHHhhhcceeeecCCCce
Q psy4233 140 NPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYG---HMWRHVFRKLAVYKKGEET 209 (303)
Q Consensus 140 ~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 209 (303)
... +......|+.+|.....+.+.. ++.+..+.||.+-.+... ..+. ..+.......|. .
T Consensus 165 ~~~--~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~p~------~ 234 (305)
T PRK08303 165 NAT--HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML--DAFGVTEENWRDALAKEPH------F 234 (305)
T ss_pred cCc--CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH--HhhccCccchhhhhccccc------c
Confidence 111 1112357999999999887653 688889999888644210 0000 000000001111 0
Q ss_pred eeCceeHHHHHHHHHHHhcCC
Q psy4233 210 IKQPVYVGDVAAAIVAACKDP 230 (303)
Q Consensus 210 ~~~~i~~~Dva~~~~~~~~~~ 230 (303)
.-+...+|+|+++++++..+
T Consensus 235 -~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 235 -AISETPRYVGRAVAALAADP 254 (305)
T ss_pred -ccCCCHHHHHHHHHHHHcCc
Confidence 12457899999999999754
No 272
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.57 E-value=4.1e-14 Score=123.86 Aligned_cols=189 Identities=14% Similarity=-0.010 Sum_probs=130.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch---hcCCCCceEEEecCCCC--HHHHH---HHhcc-
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR---LCGDLGQVLFQPYHPRN--DDEIR---KAIKY- 87 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~~~~Dl~d--~~~~~---~~~~~- 87 (303)
.++.++||||||.||.+++++|+++|++|++++|+.....+... ......++..+.+|+++ .+.+. +.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 36799999999999999999999999999999997543222111 11111357788899975 33333 34444
Q ss_pred -cCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 88 -SNVVINLIGREFA----------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 88 -~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
+|++||+||.... +..+..+++|+.++..+.+++. +.+..++|++||...+..+ +......|
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---~~p~~~~Y 208 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP---SDPLYAVY 208 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC---CCccchHH
Confidence 5599999986321 1123578899999998888764 3455699999998775311 00224789
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 225 (303)
+.+|...+.+.+.. |++++.+.||.+-.+.... .. .. .-..+.+++|+.++.
T Consensus 209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~----------~~---------~~--~~~~~p~~~A~~~~~ 267 (320)
T PLN02780 209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI----------RR---------SS--FLVPSSDGYARAALR 267 (320)
T ss_pred HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc----------cC---------CC--CCCCCHHHHHHHHHH
Confidence 99999999877663 6899999999887552210 00 01 113578999999999
Q ss_pred HhcC
Q psy4233 226 ACKD 229 (303)
Q Consensus 226 ~~~~ 229 (303)
.+..
T Consensus 268 ~~~~ 271 (320)
T PLN02780 268 WVGY 271 (320)
T ss_pred HhCC
Confidence 9963
No 273
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.55 E-value=2.7e-14 Score=120.20 Aligned_cols=205 Identities=15% Similarity=0.131 Sum_probs=142.6
Q ss_pred cCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh--------cccCEEEEc
Q psy4233 25 GAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI--------KYSNVVINL 94 (303)
Q Consensus 25 Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~D~vi~~ 94 (303)
|++ +.||.++++.|+++|++|++..|+..+..+.+.......+.+++.+|++|++++.+++ .++|++||+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 566 9999999999999999999999986643222211111112447999999998888764 347999999
Q ss_pred cccCcc------------ccchhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHH
Q psy4233 95 IGREFA------------TKNFTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGE 160 (303)
Q Consensus 95 a~~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e 160 (303)
++.... +.....+++|+.+...+++++... .-.++|++||...... ......|+.+|...+
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~-----~~~~~~y~~sKaal~ 155 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP-----MPGYSAYSASKAALE 155 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB-----STTTHHHHHHHHHHH
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc-----CccchhhHHHHHHHH
Confidence 986432 123467888998888888887442 1148999998876542 133458999999999
Q ss_pred HHHHh--------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--
Q psy4233 161 KEVLR--------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP-- 230 (303)
Q Consensus 161 ~~~~~--------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-- 230 (303)
.+.+. .|+++..|.||.+..+..........+.+......|+ ..+...+|+|+++++++...
T Consensus 156 ~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl--------~r~~~~~evA~~v~fL~s~~a~ 227 (241)
T PF13561_consen 156 GLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL--------GRLGTPEEVANAVLFLASDAAS 227 (241)
T ss_dssp HHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT--------SSHBEHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc--------CCCcCHHHHHHHHHHHhCcccc
Confidence 88875 3688999999988865322222122233223334443 23579999999999999854
Q ss_pred CCCCcEEEEeCC
Q psy4233 231 DAAGKIYQAVGP 242 (303)
Q Consensus 231 ~~~g~~~~i~~~ 242 (303)
.-.|+++.+.+|
T Consensus 228 ~itG~~i~vDGG 239 (241)
T PF13561_consen 228 YITGQVIPVDGG 239 (241)
T ss_dssp TGTSEEEEESTT
T ss_pred CccCCeEEECCC
Confidence 347888888776
No 274
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.53 E-value=4.4e-13 Score=111.69 Aligned_cols=159 Identities=8% Similarity=0.025 Sum_probs=112.1
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHh-------c
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAI-------K 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~-------~ 86 (303)
++++++++||||++.||.+++++|+++|++|+++.|+.....+..+.. ....++..+.+|+.|++++.+++ .
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 456789999999999999999999999999999998754322211111 11235778899999998887655 3
Q ss_pred -ccCEEEEccccCcc------ccc---hhhhhhhcchHHHHHHH----HHhcC-CceEEEEecCccCCCCCCCCCCCCCc
Q psy4233 87 -YSNVVINLIGREFA------TKN---FTIADANVEIPARLARL----SKEMG-VEKFIHISALNADPNPPTYYISGGSQ 151 (303)
Q Consensus 87 -~~D~vi~~a~~~~~------~~~---~~~~~~n~~~~~~l~~~----~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~ 151 (303)
.+|++||++|.... ... ...+++|..++..+++. +++.+ -..+|++||...+. ....
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--------~~~~ 153 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ--------DLTG 153 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC--------Ccch
Confidence 58999999974211 111 23445566665555443 33333 35899999865432 2467
Q ss_pred hhHHHHHHHHHHHhh-------CCCEEEEeecceeeC
Q psy4233 152 FYRTKYQGEKEVLRE-------FPEATIFRPSDMYGS 181 (303)
Q Consensus 152 y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~ 181 (303)
|+.+|...+.+.+.. ++++..+.||.+-.+
T Consensus 154 Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 154 VESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 999999999887663 689999999988765
No 275
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.53 E-value=3.5e-13 Score=113.42 Aligned_cols=190 Identities=14% Similarity=0.030 Sum_probs=133.0
Q ss_pred HHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----ccCEEEEccccCccccchhhhhh
Q psy4233 34 LCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----YSNVVINLIGREFATKNFTIADA 109 (303)
Q Consensus 34 l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~D~vi~~a~~~~~~~~~~~~~~ 109 (303)
++++|+++|++|++++|+.... . ..+++++|++|.+++.++++ ++|+|||+||..........+++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~-~---------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~v 70 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGM-T---------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARV 70 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchh-h---------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhh
Confidence 4788999999999999975431 1 14568999999999998876 48999999997655566788999
Q ss_pred hcchHHHHHHHHHhc--CCceEEEEecCccCCCCCC----------------------CCCCCCCchhHHHHHHHHHHHh
Q psy4233 110 NVEIPARLARLSKEM--GVEKFIHISALNADPNPPT----------------------YYISGGSQFYRTKYQGEKEVLR 165 (303)
Q Consensus 110 n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~----------------------~~~~~~~~y~~~K~~~e~~~~~ 165 (303)
|+.++..+++++... ...+||++||...++.+.. .|......|+.+|...+.+.+.
T Consensus 71 N~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (241)
T PRK12428 71 NFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR 150 (241)
T ss_pred chHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHH
Confidence 999999999988653 2259999999988753211 2334557899999998865532
Q ss_pred --------hCCCEEEEeecceeeCCCchhh-HHH-HHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCC
Q psy4233 166 --------EFPEATIFRPSDMYGSGDKFLR-YYG-HMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAA 233 (303)
Q Consensus 166 --------~~~~~~ilrp~~~~G~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~ 233 (303)
.++.+..++||.+.++...... ... ... .....+ . ..+...+|+|++++.++..+ ...
T Consensus 151 la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~-------~-~~~~~pe~va~~~~~l~s~~~~~~~ 220 (241)
T PRK12428 151 QAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERV--DSDAKR-------M-GRPATADEQAAVLVFLCSDAARWIN 220 (241)
T ss_pred HHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhh--hhcccc-------c-CCCCCHHHHHHHHHHHcChhhcCcc
Confidence 2689999999999887432111 000 000 000111 1 23578999999999988643 235
Q ss_pred CcEEEEeCCc
Q psy4233 234 GKIYQAVGPK 243 (303)
Q Consensus 234 g~~~~i~~~~ 243 (303)
|+...+.++.
T Consensus 221 G~~i~vdgg~ 230 (241)
T PRK12428 221 GVNLPVDGGL 230 (241)
T ss_pred CcEEEecCch
Confidence 7666666553
No 276
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.52 E-value=1.5e-12 Score=112.61 Aligned_cols=215 Identities=9% Similarity=0.039 Sum_probs=135.5
Q ss_pred ccCCCcEEEEEcC--CChhHHHHHHHHHhCCCeEEEeecCCCcccc-----------cchhcCC---CCceEEEecCC--
Q psy4233 14 SSFNGVVATVFGA--SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVR-----------DLRLCGD---LGQVLFQPYHP-- 75 (303)
Q Consensus 14 ~~~~~~~vlVtGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-----------~~~~~~~---~~~~~~~~~Dl-- 75 (303)
+++++++++|||| +..||.+++++|.+.|.+|++ .|+.+.... ....... ......+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 4578999999999 799999999999999999988 554221100 0000000 01145678888
Q ss_pred CCHH------------------HHHHHhc-------ccCEEEEccccCc----------cccchhhhhhhcchHHHHHHH
Q psy4233 76 RNDD------------------EIRKAIK-------YSNVVINLIGREF----------ATKNFTIADANVEIPARLARL 120 (303)
Q Consensus 76 ~d~~------------------~~~~~~~-------~~D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~ 120 (303)
.+++ ++.++++ .+|++||+||... .+..+..+++|+.++..++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3222 4454433 3799999996311 123457889999999888887
Q ss_pred HHhc--CCceEEEEecCccCCCCCCCCCCC-C-CchhHHHHHHHHHHHhh--------CCCEEEEeecceeeCCCchhhH
Q psy4233 121 SKEM--GVEKFIHISALNADPNPPTYYISG-G-SQFYRTKYQGEKEVLRE--------FPEATIFRPSDMYGSGDKFLRY 188 (303)
Q Consensus 121 ~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~-~-~~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~~~~~~ 188 (303)
+... .-.++|++||...... .+ . ..|+.+|...+.+.+.. ++++..+.||.+..+.......
T Consensus 164 ~~p~m~~~G~II~isS~a~~~~------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~ 237 (303)
T PLN02730 164 FGPIMNPGGASISLTYIASERI------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF 237 (303)
T ss_pred HHHHHhcCCEEEEEechhhcCC------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc
Confidence 6542 1148999999766432 22 2 36999999999887653 4678888998887653221100
Q ss_pred HHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233 189 YGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
............|+ ..+...+|+|.++++++... ...|+.+.+.++.
T Consensus 238 ~~~~~~~~~~~~pl--------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~ 286 (303)
T PLN02730 238 IDDMIEYSYANAPL--------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL 286 (303)
T ss_pred cHHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence 01111101111221 13578999999999999743 2367777776653
No 277
>KOG0725|consensus
Probab=99.52 E-value=2.5e-12 Score=109.36 Aligned_cols=220 Identities=15% Similarity=0.050 Sum_probs=150.0
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc----CCCCceEEEecCCCCHHHHHHHh----
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC----GDLGQVLFQPYHPRNDDEIRKAI---- 85 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~---- 85 (303)
....++.++||||+..||.+++++|.+.|.+|++..|+.+........+ ...+++..+.+|+++.++.++++
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999865432221111 11245889999999877665543
Q ss_pred ----cccCEEEEccccCcc---------ccchhhhhhhcch-HHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCC
Q psy4233 86 ----KYSNVVINLIGREFA---------TKNFTIADANVEI-PARLARLSKE----MGVEKFIHISALNADPNPPTYYIS 147 (303)
Q Consensus 86 ----~~~D~vi~~a~~~~~---------~~~~~~~~~n~~~-~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~ 147 (303)
.+.|+++++||.... +.+...+++|+.+ ...+.+++.. .+-..++++||........ .
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~----~ 159 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP----G 159 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC----C
Confidence 348999999996322 3345788999994 5566666543 3345899999887765311 1
Q ss_pred CCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCch--h-hHHHHHHHh--hhcceeeecCCCceeeCcee
Q psy4233 148 GGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKF--L-RYYGHMWRH--VFRKLAVYKKGEETIKQPVY 215 (303)
Q Consensus 148 ~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~--~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ 215 (303)
....|+.+|...+++.+.. ++++..+-||.+..+.... . .....+.+. ....+|. -.+..
T Consensus 160 ~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~--------gr~g~ 231 (270)
T KOG0725|consen 160 SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPL--------GRVGT 231 (270)
T ss_pred CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccccc--------CCccC
Confidence 1168999999999998873 6899999999998775110 0 000111110 1111121 34688
Q ss_pred HHHHHHHHHHHhcCCC--CCCcEEEEeCCccc
Q psy4233 216 VGDVAAAIVAACKDPD--AAGKIYQAVGPKRY 245 (303)
Q Consensus 216 ~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~ 245 (303)
.+|+|.++++++..+. ..|+.+.+.++..+
T Consensus 232 ~~eva~~~~fla~~~asyitG~~i~vdgG~~~ 263 (270)
T KOG0725|consen 232 PEEVAEAAAFLASDDASYITGQTIIVDGGFTV 263 (270)
T ss_pred HHHHHHhHHhhcCcccccccCCEEEEeCCEEe
Confidence 9999999999998643 35777777666543
No 278
>KOG1200|consensus
Probab=99.52 E-value=1.6e-12 Score=101.09 Aligned_cols=210 Identities=13% Similarity=0.144 Sum_probs=144.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------ccC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YSN 89 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D 89 (303)
+.+..+||||+..||++++..|.++|++|.+.+++.....+.....+.+.+-..+.+|+++++++...++ .++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 3568999999999999999999999999999988755443333344444456778999999888776543 279
Q ss_pred EEEEccccCc--------cccchhhhhhhcchHHHHHHHHHhc----CC--ceEEEEecCccCCCCCCCCCCCCCchhH-
Q psy4233 90 VVINLIGREF--------ATKNFTIADANVEIPARLARLSKEM----GV--EKFIHISALNADPNPPTYYISGGSQFYR- 154 (303)
Q Consensus 90 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~----~~--~~~v~~Ss~~~~~~~~~~~~~~~~~y~~- 154 (303)
++++|||..- .+.+.....+|+.+.....+++-+. +. -+||.+||+-..-.. ..+..|+.
T Consensus 93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN-----~GQtnYAAs 167 (256)
T KOG1200|consen 93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN-----FGQTNYAAS 167 (256)
T ss_pred EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc-----ccchhhhhh
Confidence 9999999732 2456678899999998888877553 11 289999997543211 11244544
Q ss_pred -------HHHHHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 155 -------TKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 155 -------~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
+|.++.+. ...++++..+-||.+-.|...... ........+.+|. ..+-..+|+|..++++.
T Consensus 168 K~GvIgftktaArEl-a~knIrvN~VlPGFI~tpMT~~mp--~~v~~ki~~~iPm--------gr~G~~EevA~~V~fLA 236 (256)
T KOG1200|consen 168 KGGVIGFTKTAAREL-ARKNIRVNVVLPGFIATPMTEAMP--PKVLDKILGMIPM--------GRLGEAEEVANLVLFLA 236 (256)
T ss_pred cCceeeeeHHHHHHH-hhcCceEeEeccccccChhhhhcC--HHHHHHHHccCCc--------cccCCHHHHHHHHHHHh
Confidence 45554443 445899999999999887543111 1122213345553 34678899999999998
Q ss_pred cCCCC--CCcEEEEeCC
Q psy4233 228 KDPDA--AGKIYQAVGP 242 (303)
Q Consensus 228 ~~~~~--~g~~~~i~~~ 242 (303)
..... .|..+.+.+|
T Consensus 237 S~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 237 SDASSYITGTTLEVTGG 253 (256)
T ss_pred ccccccccceeEEEecc
Confidence 64332 5777877765
No 279
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.50 E-value=1.5e-13 Score=108.95 Aligned_cols=143 Identities=19% Similarity=0.146 Sum_probs=108.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecC--CCcccccchh-cCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRG--NFYDVRDLRL-CGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~--~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
|+++||||+|-||.+++++|+++| ..|+++.|+ .+...+.... .....+++++++|+++.+++.++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999996 577777887 1211111111 1122679999999999988887664 3
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG 159 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~ 159 (303)
.|++||++|.... +.....+++|+.+...+.+++...+-.++|++||...... ......|+.+|...
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~Y~askaal 155 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRG-----SPGMSAYSASKAAL 155 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSS-----STTBHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccC-----CCCChhHHHHHHHH
Confidence 7999999997432 2334789999999999999988855679999999888752 23346899999999
Q ss_pred HHHHHhh
Q psy4233 160 EKEVLRE 166 (303)
Q Consensus 160 e~~~~~~ 166 (303)
+.+.+..
T Consensus 156 ~~~~~~l 162 (167)
T PF00106_consen 156 RGLTQSL 162 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988763
No 280
>KOG1611|consensus
Probab=99.50 E-value=1.9e-12 Score=103.23 Aligned_cols=202 Identities=16% Similarity=0.133 Sum_probs=136.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcc-cccchhc-CCCCceEEEecCCCCHHHHHHHhc------
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYD-VRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIK------ 86 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~-~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~------ 86 (303)
|.++.|+||||+..||-.|+++|++. |.++++..++..+. ..++..+ ...+++++++.|+++.+++++..+
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV 80 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence 45678999999999999999999985 57776666654433 4444433 235889999999999888776653
Q ss_pred ---ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcCCc-----------eEEEEecCccCC
Q psy4233 87 ---YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLS----KEMGVE-----------KFIHISALNADP 139 (303)
Q Consensus 87 ---~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~~~-----------~~v~~Ss~~~~~ 139 (303)
+.|++|++||.... ......+++|..++..+.+++ +++..+ .+|++||...-.
T Consensus 81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 36999999996211 123468899998888777765 222222 788888876542
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeC
Q psy4233 140 NPPTYYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQ 212 (303)
Q Consensus 140 ~~~~~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (303)
......+...|..+|.+.-...+.. ++=++.+.||||-....+ . -.
T Consensus 161 --~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg----------------------~---~a 213 (249)
T KOG1611|consen 161 --GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG----------------------K---KA 213 (249)
T ss_pred --CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC----------------------C---Cc
Confidence 2222255689999999998888774 345666899998743221 1 23
Q ss_pred ceeHHHHHHHHHHHhcC--CCCCCcEEEEeCCccc
Q psy4233 213 PVYVGDVAAAIVAACKD--PDAAGKIYQAVGPKRY 245 (303)
Q Consensus 213 ~i~~~Dva~~~~~~~~~--~~~~g~~~~i~~~~~~ 245 (303)
.+++++-+.-++..+.+ +...|.-|+ .++.++
T Consensus 214 ~ltveeSts~l~~~i~kL~~~hnG~ffn-~dlt~i 247 (249)
T KOG1611|consen 214 ALTVEESTSKLLASINKLKNEHNGGFFN-RDGTPI 247 (249)
T ss_pred ccchhhhHHHHHHHHHhcCcccCcceEc-cCCCcC
Confidence 47778888888777654 334454443 344444
No 281
>PLN00015 protochlorophyllide reductase
Probab=99.48 E-value=5.8e-13 Score=116.22 Aligned_cols=199 Identities=14% Similarity=0.135 Sum_probs=127.2
Q ss_pred EEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcC-CCCceEEEecCCCCHHHHHHHhc-------ccCEEE
Q psy4233 22 TVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCG-DLGQVLFQPYHPRNDDEIRKAIK-------YSNVVI 92 (303)
Q Consensus 22 lVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~vi 92 (303)
+||||++.||.+++++|+++| ++|++.+|+.....+...... ...++.++.+|++|.+++.++++ .+|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 599999999999999999999 999999987543222211111 12357889999999998877654 379999
Q ss_pred EccccCcc---------ccchhhhhhhcchHHHHHHHH----HhcC--CceEEEEecCccCCCC-----C----------
Q psy4233 93 NLIGREFA---------TKNFTIADANVEIPARLARLS----KEMG--VEKFIHISALNADPNP-----P---------- 142 (303)
Q Consensus 93 ~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~----~~~~--~~~~v~~Ss~~~~~~~-----~---------- 142 (303)
|+||.... +..+..+++|+.++..+++++ ++.+ ..++|++||...+... .
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~ 160 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG 160 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence 99986321 122467889999987776654 3333 3599999998654210 0
Q ss_pred ---------------CCCCCCCCchhHHHHHHHHHHHh--------hCCCEEEEeecceee-CCCc-hhhHHHHHHHhhh
Q psy4233 143 ---------------TYYISGGSQFYRTKYQGEKEVLR--------EFPEATIFRPSDMYG-SGDK-FLRYYGHMWRHVF 197 (303)
Q Consensus 143 ---------------~~~~~~~~~y~~~K~~~e~~~~~--------~~~~~~ilrp~~~~G-~~~~-~~~~~~~~~~~~~ 197 (303)
..+..+...|+.+|...+...+. .++.++.+.||++.. +... .......... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~-~~ 239 (308)
T PLN00015 161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFP-PF 239 (308)
T ss_pred hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHH-HH
Confidence 00112345699999985554332 257899999999953 3211 1111110000 00
Q ss_pred cceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 198 RKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 198 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
...+. ..+.+.++.|+.++.++..
T Consensus 240 ~~~~~--------~~~~~pe~~a~~~~~l~~~ 263 (308)
T PLN00015 240 QKYIT--------KGYVSEEEAGKRLAQVVSD 263 (308)
T ss_pred HHHHh--------cccccHHHhhhhhhhhccc
Confidence 01110 1247889999999998864
No 282
>KOG4169|consensus
Probab=99.47 E-value=1.5e-12 Score=103.89 Aligned_cols=214 Identities=14% Similarity=0.075 Sum_probs=145.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc--ccccchhcCCCCceEEEecCCCCHHHHHHHhcc-----
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY--DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY----- 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 87 (303)
+.+++++++||+.|.||..+.++|+++|.++.++..+.+. ....++..-....+.++++|+++..++++.|++
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999887777655433 233344333446699999999999888887764
Q ss_pred --cCEEEEccccCccccchhhhhhhcchHHHHHHHH----Hh-c-C-CceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 88 --SNVVINLIGREFATKNFTIADANVEIPARLARLS----KE-M-G-VEKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 88 --~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~----~~-~-~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
.|++||.||..++.+.+....+|+.+..+-...+ .+ . | -.-+|.+||...... ......|+.+|+-
T Consensus 82 g~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P-----~p~~pVY~AsKaG 156 (261)
T KOG4169|consen 82 GTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP-----MPVFPVYAASKAG 156 (261)
T ss_pred CceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc-----cccchhhhhcccc
Confidence 6999999999988888999999988776654444 22 2 2 236999999877652 1223467777754
Q ss_pred H---------HHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCC----CceeeCceeHHHHHHHHHH
Q psy4233 159 G---------EKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKG----EETIKQPVYVGDVAAAIVA 225 (303)
Q Consensus 159 ~---------e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~Dva~~~~~ 225 (303)
. +.+....|+.+..++||.+-.. +..-++.+ ....-+.+. -.. ..--+..++++.+++
T Consensus 157 VvgFTRSla~~ayy~~sGV~~~avCPG~t~t~-------l~~~~~~~-~~~~e~~~~~~~~l~~-~~~q~~~~~a~~~v~ 227 (261)
T KOG4169|consen 157 VVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD-------LAENIDAS-GGYLEYSDSIKEALER-APKQSPACCAINIVN 227 (261)
T ss_pred eeeeehhhhhhhhHhhcCEEEEEECCCcchHH-------HHHHHHhc-CCcccccHHHHHHHHH-cccCCHHHHHHHHHH
Confidence 3 4455556899999999766421 11111000 000000000 000 123567899999999
Q ss_pred HhcCCCCCCcEEEEeCCc
Q psy4233 226 ACKDPDAAGKIYQAVGPK 243 (303)
Q Consensus 226 ~~~~~~~~g~~~~i~~~~ 243 (303)
+++. ...|.+|-+..+.
T Consensus 228 aiE~-~~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 228 AIEY-PKNGAIWKVDSGS 244 (261)
T ss_pred HHhh-ccCCcEEEEecCc
Confidence 9996 4568899887764
No 283
>KOG1207|consensus
Probab=99.47 E-value=1.6e-13 Score=104.70 Aligned_cols=211 Identities=15% Similarity=0.110 Sum_probs=148.4
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc---cCEE
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY---SNVV 91 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~D~v 91 (303)
+..+..|++||+.-.||+.++.+|.+.|.+|+++.|.+.......+... ..++.+.+|+.+.+.+.+.+.. .|-+
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p--~~I~Pi~~Dls~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP--SLIIPIVGDLSAWEALFKLLVPVFPIDGL 81 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC--cceeeeEecccHHHHHHHhhcccCchhhh
Confidence 4567899999999999999999999999999999998655444444332 3399999999998888887765 6999
Q ss_pred EEccccC--------ccccchhhhhhhcchHHHHHHHHHh----cCC-ceEEEEecCccCCCCCCCCCCCCCchhHHHHH
Q psy4233 92 INLIGRE--------FATKNFTIADANVEIPARLARLSKE----MGV-EKFIHISALNADPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 92 i~~a~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~ 158 (303)
+++||.. ..+.-...+++|+.+..++.+...+ .++ ..||.+||....- |..-.+.|+.+|.+
T Consensus 82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R-----~~~nHtvYcatKaA 156 (245)
T KOG1207|consen 82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR-----PLDNHTVYCATKAA 156 (245)
T ss_pred hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc-----ccCCceEEeecHHH
Confidence 9999862 2234456889999998888887433 222 3799999987754 23445789999999
Q ss_pred HHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHh--hhcceeeecCCCceeeCceeHHHHHHHHHHHhcC
Q psy4233 159 GEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRH--VFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKD 229 (303)
Q Consensus 159 ~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 229 (303)
.+..-+.. .+++..+.|..++...... + +..--+. ....+|+ --|..++.+.+++++++..
T Consensus 157 LDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~d-n-WSDP~K~k~mL~riPl--------~rFaEV~eVVnA~lfLLSd 226 (245)
T KOG1207|consen 157 LDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRD-N-WSDPDKKKKMLDRIPL--------KRFAEVDEVVNAVLFLLSD 226 (245)
T ss_pred HHHHHHHHHHhhCcceeEeeccCCeEEEeccccc-c-cCCchhccchhhhCch--------hhhhHHHHHHhhheeeeec
Confidence 88766653 3677888888888642210 0 0000000 1112332 3478999999999999986
Q ss_pred CCC--CCcEEEEeCC
Q psy4233 230 PDA--AGKIYQAVGP 242 (303)
Q Consensus 230 ~~~--~g~~~~i~~~ 242 (303)
... .|...-+.+|
T Consensus 227 ~ssmttGstlpveGG 241 (245)
T KOG1207|consen 227 NSSMTTGSTLPVEGG 241 (245)
T ss_pred CcCcccCceeeecCC
Confidence 443 4555555444
No 284
>KOG1208|consensus
Probab=99.42 E-value=5.7e-12 Score=108.84 Aligned_cols=203 Identities=15% Similarity=0.074 Sum_probs=135.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hc--CCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LC--GDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~--~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
.+.+++++|||||..||.+++++|..+|..|+...|+.....+..+ +. .....+.++++|++|..++.+...
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~ 111 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK 111 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence 3457899999999999999999999999999999998643322211 11 223458889999999988876543
Q ss_pred --ccCEEEEccccCcc------ccchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCC--------CCCC-
Q psy4233 87 --YSNVVINLIGREFA------TKNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNP--------PTYY- 145 (303)
Q Consensus 87 --~~D~vi~~a~~~~~------~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~--------~~~~- 145 (303)
..|++|++||.... +.-+..+.+|..+...|.+.+ +.....|||++||... ... +...
T Consensus 112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~ 190 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKL 190 (314)
T ss_pred CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccC
Confidence 26999999997322 334678888988887777665 4444369999999875 210 1111
Q ss_pred CCCCCchhHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCc-eeHHH
Q psy4233 146 ISGGSQFYRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQP-VYVGD 218 (303)
Q Consensus 146 ~~~~~~y~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D 218 (303)
......|+.+|.+......+. ++....+.||.+..+...-...+.+.+. ..+. .-+ -+.+.
T Consensus 191 ~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~---~~l~---------~~~~ks~~~ 258 (314)
T KOG1208|consen 191 YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLA---KKLS---------WPLTKSPEQ 258 (314)
T ss_pred ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHH---HHHH---------HHhccCHHH
Confidence 122224999999887666553 6888899999998873321222222111 0111 011 35677
Q ss_pred HHHHHHHHhcCC
Q psy4233 219 VAAAIVAACKDP 230 (303)
Q Consensus 219 va~~~~~~~~~~ 230 (303)
-|+..+.++.++
T Consensus 259 ga~t~~~~a~~p 270 (314)
T KOG1208|consen 259 GAATTCYAALSP 270 (314)
T ss_pred HhhheehhccCc
Confidence 777777777665
No 285
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.41 E-value=4.6e-11 Score=103.32 Aligned_cols=216 Identities=11% Similarity=0.031 Sum_probs=128.8
Q ss_pred ccCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCC--------Cccccc--ch---------------hcCCCC
Q psy4233 14 SSFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGN--------FYDVRD--LR---------------LCGDLG 66 (303)
Q Consensus 14 ~~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~--------~~~~~~--~~---------------~~~~~~ 66 (303)
.++++++++||||+ ..||.+++++|.++|.+|++.+|.+ .+.... .. ...+..
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~ 83 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD 83 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence 34568899999995 8999999999999999999866431 000000 00 000001
Q ss_pred ceEEEecCCCC--------HHHHHHH-------hcccCEEEEccccCc----------cccchhhhhhhcchHHHHHHHH
Q psy4233 67 QVLFQPYHPRN--------DDEIRKA-------IKYSNVVINLIGREF----------ATKNFTIADANVEIPARLARLS 121 (303)
Q Consensus 67 ~~~~~~~Dl~d--------~~~~~~~-------~~~~D~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~~~ 121 (303)
..+-+..|+.+ .+++.++ +.+.|++||+||... .+..+..+++|+.++.++++++
T Consensus 84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~ 163 (299)
T PRK06300 84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF 163 (299)
T ss_pred CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 11222222222 0123332 234899999997421 1233567899999999998877
Q ss_pred Hhc--CCceEEEEecCccCCCCCCCCCCCC--CchhHHHHHHHHHHHhh--------CCCEEEEeecceeeCCCchhhHH
Q psy4233 122 KEM--GVEKFIHISALNADPNPPTYYISGG--SQFYRTKYQGEKEVLRE--------FPEATIFRPSDMYGSGDKFLRYY 189 (303)
Q Consensus 122 ~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~--~~y~~~K~~~e~~~~~~--------~~~~~ilrp~~~~G~~~~~~~~~ 189 (303)
-.. .-.++|++||...... .+. ..|+.+|...+.+.+.. |+++..+.||.+..+........
T Consensus 164 ~p~m~~~G~ii~iss~~~~~~------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~ 237 (299)
T PRK06300 164 GPIMNPGGSTISLTYLASMRA------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI 237 (299)
T ss_pred HHHhhcCCeEEEEeehhhcCc------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc
Confidence 542 1237898888665432 122 26999999998877642 57788899998876532110000
Q ss_pred HHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCC--CCCCcEEEEeCCc
Q psy4233 190 GHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDP--DAAGKIYQAVGPK 243 (303)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~~~ 243 (303)
...........+. ..+...+|+|.++++++... ...|+++.+.++.
T Consensus 238 ~~~~~~~~~~~p~--------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~ 285 (299)
T PRK06300 238 ERMVDYYQDWAPL--------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA 285 (299)
T ss_pred HHHHHHHHhcCCC--------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 0111001112221 13568899999999998743 3467788776653
No 286
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.38 E-value=1.5e-11 Score=103.99 Aligned_cols=162 Identities=15% Similarity=0.147 Sum_probs=114.4
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccch-hc-CCC-CceEEEecCCCC-HHHHHHHhc---
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLR-LC-GDL-GQVLFQPYHPRN-DDEIRKAIK--- 86 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~-~~-~~~-~~~~~~~~Dl~d-~~~~~~~~~--- 86 (303)
.+++++++||||++.||.++++.|+++|++|+++.|+.... .+... .. ... ..+.+..+|+++ .+++..+++
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999988888875431 11111 00 000 247788899998 777665543
Q ss_pred ----ccCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHHhcC-CceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 87 ----YSNVVINLIGREFA---------TKNFTIADANVEIPARLARLSKEMG-VEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 87 ----~~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
+.|++||+||.... +..+..+++|+.+...+.+++...- .+++|++||.... ..... ...|
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~----~~~Y 156 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG----QAAY 156 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC----cchH
Confidence 37999999996421 2334788899998888777443211 1299999999876 32111 4799
Q ss_pred hHHHHHHHHHHHhh-------CCCEEEEeecceeeC
Q psy4233 153 YRTKYQGEKEVLRE-------FPEATIFRPSDMYGS 181 (303)
Q Consensus 153 ~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~ 181 (303)
+.+|...+.+.+.. ++.+..+.||.+-.+
T Consensus 157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~ 192 (251)
T COG1028 157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP 192 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence 99999998766552 688999999955433
No 287
>KOG1209|consensus
Probab=99.37 E-value=4.1e-12 Score=100.26 Aligned_cols=155 Identities=12% Similarity=-0.004 Sum_probs=116.4
Q ss_pred CCcEEEEEcC-CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--------c
Q psy4233 17 NGVVATVFGA-SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--------Y 87 (303)
Q Consensus 17 ~~~~vlVtGa-tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~ 87 (303)
+.++|||||+ .|.||.++++++.++|+.|++..|+.+...+. ... .++...+.|+++++++.+... +
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L-~~~---~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQL-AIQ---FGLKPYKLDVSKPEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhH-HHh---hCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence 4678999875 69999999999999999999999985543332 221 358899999999998877543 2
Q ss_pred cCEEEEccccCccc--------cchhhhhhhcchHHHHHHHHHhc--C-CceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 88 SNVVINLIGREFAT--------KNFTIADANVEIPARLARLSKEM--G-VEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 88 ~D~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
.|+++|+||..+.. .-+..+++|+-|..++.++.... . ...||++.|..++-. ..-.+.|..+|
T Consensus 82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp-----fpf~~iYsAsK 156 (289)
T KOG1209|consen 82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP-----FPFGSIYSASK 156 (289)
T ss_pred eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec-----cchhhhhhHHH
Confidence 69999999975432 23468899999888888777632 1 138999999988752 12236799999
Q ss_pred HHHHHHHHhh-------CCCEEEEeecceee
Q psy4233 157 YQGEKEVLRE-------FPEATIFRPSDMYG 180 (303)
Q Consensus 157 ~~~e~~~~~~-------~~~~~ilrp~~~~G 180 (303)
++.-++.+.. |++++.+-+|.+-.
T Consensus 157 AAihay~~tLrlEl~PFgv~Vin~itGGv~T 187 (289)
T KOG1209|consen 157 AAIHAYARTLRLELKPFGVRVINAITGGVAT 187 (289)
T ss_pred HHHHHhhhhcEEeeeccccEEEEecccceec
Confidence 9999887763 67777777776653
No 288
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.35 E-value=9.7e-12 Score=97.69 Aligned_cols=159 Identities=18% Similarity=0.096 Sum_probs=115.4
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------c
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------Y 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 87 (303)
.+++-+||||||+..||..+++++.+.|.+|++..|+.....+.... -+.+....+|+.|.++.++++. .
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~ 78 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---NPEIHTEVCDVADRDSRRELVEWLKKEYPN 78 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---CcchheeeecccchhhHHHHHHHHHhhCCc
Confidence 35677999999999999999999999999999999985433332222 2568889999999886665442 3
Q ss_pred cCEEEEccccCcc----------ccchhhhhhhcchHHHHHHHHHh----cCCceEEEEecCccCCCCCCCCCCCCCchh
Q psy4233 88 SNVVINLIGREFA----------TKNFTIADANVEIPARLARLSKE----MGVEKFIHISALNADPNPPTYYISGGSQFY 153 (303)
Q Consensus 88 ~D~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~ 153 (303)
.+++|+|||.... ....+-.++|+.++..|..+.-. .+-.-+|.+||.-.+-.. .....|+
T Consensus 79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm-----~~~PvYc 153 (245)
T COG3967 79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM-----ASTPVYC 153 (245)
T ss_pred hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc-----cccccch
Confidence 6999999996211 11235667899999888777643 233479999998887632 3335789
Q ss_pred HHHHHHHHHHHh-------hCCCEEEEeecceeeC
Q psy4233 154 RTKYQGEKEVLR-------EFPEATIFRPSDMYGS 181 (303)
Q Consensus 154 ~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~ 181 (303)
.+|+..-.|-.+ .++.+.=+-|+.|-.+
T Consensus 154 aTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 154 ATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred hhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 988887665433 3677777888888754
No 289
>KOG1610|consensus
Probab=99.35 E-value=3.5e-11 Score=100.96 Aligned_cols=160 Identities=13% Similarity=0.092 Sum_probs=122.9
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY------- 87 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------- 87 (303)
+...+-|||||.....|..++++|.++|+.|++-.-. ++..+.+..+..+++...++.|++++++++++.+-
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~-~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLT-EEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeec-CchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 3456779999999999999999999999999998844 33444445444468899999999999999987642
Q ss_pred --cCEEEEccccCcc---------ccchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 88 --SNVVINLIGREFA---------TKNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 88 --~D~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
-=.|||+||.... +......++|+.|+..+.++.. ++. .|+|++||.+..- +.....+|
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~-----~~p~~g~Y 178 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRV-----ALPALGPY 178 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCc-----cCcccccc
Confidence 4689999995322 2335788999999988887764 333 3999999998743 22345899
Q ss_pred hHHHHHHHHHHHh-------hCCCEEEEeecceeeC
Q psy4233 153 YRTKYQGEKEVLR-------EFPEATIFRPSDMYGS 181 (303)
Q Consensus 153 ~~~K~~~e~~~~~-------~~~~~~ilrp~~~~G~ 181 (303)
+.||..+|.+... +|++++++-||.+-.+
T Consensus 179 ~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~ 214 (322)
T KOG1610|consen 179 CVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTN 214 (322)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccc
Confidence 9999999986543 5899999999955443
No 290
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.34 E-value=1.7e-11 Score=98.41 Aligned_cols=151 Identities=15% Similarity=0.109 Sum_probs=105.9
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccc---cch-hcCCCCceEEEecCCCCHHHHHHHhcc-------
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVR---DLR-LCGDLGQVLFQPYHPRNDDEIRKAIKY------- 87 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~---~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~------- 87 (303)
+++||||+|-||..+++.|.+++ .+++++.|+.....+ .+. +.....+++++.+|++|++++.+++..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 68999999999999999999998 578999998321111 111 111225699999999999999998754
Q ss_pred cCEEEEccccCcc--------ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc-CCCCCCCCCCCCCchhHHHHH
Q psy4233 88 SNVVINLIGREFA--------TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA-DPNPPTYYISGGSQFYRTKYQ 158 (303)
Q Consensus 88 ~D~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~-~~~~~~~~~~~~~~y~~~K~~ 158 (303)
++.|||+++...+ +.....+...+.++.+|.++.....++.+|++||+.. ++. .....|+..-..
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~------~gq~~YaaAN~~ 155 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG------PGQSAYAAANAF 155 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-------TTBHHHHHHHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC------cchHhHHHHHHH
Confidence 5889999996322 1223456667888999999999888999999999876 553 334689998888
Q ss_pred HHHHHHhh---CCCEEEEeec
Q psy4233 159 GEKEVLRE---FPEATIFRPS 176 (303)
Q Consensus 159 ~e~~~~~~---~~~~~ilrp~ 176 (303)
.+.+.+.. +.+++.+.-+
T Consensus 156 lda~a~~~~~~g~~~~sI~wg 176 (181)
T PF08659_consen 156 LDALARQRRSRGLPAVSINWG 176 (181)
T ss_dssp HHHHHHHHHHTTSEEEEEEE-
T ss_pred HHHHHHHHHhCCCCEEEEEcc
Confidence 88776653 7888777754
No 291
>KOG1210|consensus
Probab=99.28 E-value=9.7e-11 Score=98.16 Aligned_cols=197 Identities=16% Similarity=0.119 Sum_probs=134.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC---CCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG---DLGQVLFQPYHPRNDDEIRKAIKY-------S 88 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~-------~ 88 (303)
.+|+|||++.-+|..++..+..+|++|+++.|+..+..+..+... ...++.+..+|+.|.+++...+++ +
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 589999999999999999999999999999998765443333222 223466899999999888877653 6
Q ss_pred CEEEEccccCcc-----ccc---hhhhhhhcchHHHHHHHHHhc----C-CceEEEEecCccCCCCCCCCCCCCCchhHH
Q psy4233 89 NVVINLIGREFA-----TKN---FTIADANVEIPARLARLSKEM----G-VEKFIHISALNADPNPPTYYISGGSQFYRT 155 (303)
Q Consensus 89 D~vi~~a~~~~~-----~~~---~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~ 155 (303)
|.+|+|||.... .++ +..+++|..++.++++++-.. . ..+|+++||..+-- +....+.|..+
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~-----~i~GysaYs~s 188 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML-----GIYGYSAYSPS 188 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc-----CcccccccccH
Confidence 999999996322 222 368899999999998877432 1 23899998876632 12334678777
Q ss_pred HHHHHHHHHh-------hCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc
Q psy4233 156 KYQGEKEVLR-------EFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK 228 (303)
Q Consensus 156 K~~~e~~~~~-------~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 228 (303)
|.....+... .++.++..-|+.+..|+-.--+.. +.....+...+ .+.+..+++|.+++.=+.
T Consensus 189 K~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~t------kP~~t~ii~g~----ss~~~~e~~a~~~~~~~~ 258 (331)
T KOG1210|consen 189 KFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKT------KPEETKIIEGG----SSVIKCEEMAKAIVKGMK 258 (331)
T ss_pred HHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccccc------CchheeeecCC----CCCcCHHHHHHHHHhHHh
Confidence 7766554433 367777777877776642100000 11122222222 344899999999998776
Q ss_pred CC
Q psy4233 229 DP 230 (303)
Q Consensus 229 ~~ 230 (303)
..
T Consensus 259 rg 260 (331)
T KOG1210|consen 259 RG 260 (331)
T ss_pred hc
Confidence 53
No 292
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.18 E-value=3e-10 Score=120.50 Aligned_cols=160 Identities=14% Similarity=0.057 Sum_probs=118.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCccc----------c----------------------------
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDV----------R---------------------------- 57 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~----------~---------------------------- 57 (303)
++++++||||++.||..++++|.++ |.+|+++.|+..... .
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 3679999999999999999999998 599999999731000 0
Q ss_pred ---------cchh-cCCCCceEEEecCCCCHHHHHHHhc------ccCEEEEccccCcc--------ccchhhhhhhcch
Q psy4233 58 ---------DLRL-CGDLGQVLFQPYHPRNDDEIRKAIK------YSNVVINLIGREFA--------TKNFTIADANVEI 113 (303)
Q Consensus 58 ---------~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D~vi~~a~~~~~--------~~~~~~~~~n~~~ 113 (303)
.+.. .....+++++.+|++|.+++.+++. ++|.|||+||.... +.....+++|+.+
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0000 0111357899999999998887664 37999999996322 2345689999999
Q ss_pred HHHHHHHHHhcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhh-----CCCEEEEeecceeeC
Q psy4233 114 PARLARLSKEMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLRE-----FPEATIFRPSDMYGS 181 (303)
Q Consensus 114 ~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~-----~~~~~ilrp~~~~G~ 181 (303)
+.++++++.....++||++||...+... .....|+.+|.....+.+.. +.++..+.||..-++
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~-----~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFYGN-----TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcCCC-----CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 9999999988777799999998764321 23468999998887766553 467788888876554
No 293
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.18 E-value=1.7e-10 Score=91.78 Aligned_cols=155 Identities=14% Similarity=0.144 Sum_probs=104.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------cCEE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------SNVV 91 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~D~v 91 (303)
|+++|||||||+|. +++.|.++|++|++++|++..............++..+.+|++|.+++.+++++ +|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 58999999998876 999999999999999987543222111111234688899999999998887754 4566
Q ss_pred EEccccCccccchhhhhhhcchHHHHHHHHHhcCCc----eEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhC
Q psy4233 92 INLIGREFATKNFTIADANVEIPARLARLSKEMGVE----KFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREF 167 (303)
Q Consensus 92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~ 167 (303)
|+.+ ...++.++.++|++.+++ +++++=+..+.. + +...+. +....
T Consensus 80 v~~v--------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~-----------~----~~~~~~-~~~~~ 129 (177)
T PRK08309 80 VAWI--------------HSSAKDALSVVCRELDGSSETYRLFHVLGSAASD-----------P----RIPSEK-IGPAR 129 (177)
T ss_pred EEec--------------cccchhhHHHHHHHHccCCCCceEEEEeCCcCCc-----------h----hhhhhh-hhhcC
Confidence 6544 344667899999999998 899887555421 1 111122 22234
Q ss_pred CCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhcCCC
Q psy4233 168 PEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACKDPD 231 (303)
Q Consensus 168 ~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 231 (303)
..|--+..|.+.-. ... -|++-+.+++.++.+++.+.
T Consensus 130 ~~~~~i~lgf~~~~-------------------------~~~--rwlt~~ei~~gv~~~~~~~~ 166 (177)
T PRK08309 130 CSYRRVILGFVLED-------------------------TYS--RWLTHEEISDGVIKAIESDA 166 (177)
T ss_pred CceEEEEEeEEEeC-------------------------Ccc--ccCchHHHHHHHHHHHhcCC
Confidence 56666666655411 112 26777889999999987644
No 294
>PTZ00325 malate dehydrogenase; Provisional
Probab=99.12 E-value=5.2e-10 Score=97.04 Aligned_cols=162 Identities=12% Similarity=-0.008 Sum_probs=109.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
.+|+||+|+||+|.||+.++..|..++ .++.++++.. .......+.-... .....+.+|+.++.+.++++|+||+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~-~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~gaDvVVi 82 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG-APGVAADLSHIDT--PAKVTGYADGELWEKALRGADLVLI 82 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC-CcccccchhhcCc--CceEEEecCCCchHHHhCCCCEEEE
Confidence 346799999999999999999998665 6899998832 1111111110011 2234455666666788999999999
Q ss_pred ccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC--------CCCCCCCCCCchhHHHHHHHH--
Q psy4233 94 LIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN--------PPTYYISGGSQFYRTKYQGEK-- 161 (303)
Q Consensus 94 ~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~--------~~~~~~~~~~~y~~~K~~~e~-- 161 (303)
++|.... ..+.+.+..|...++++++++++++++++|+++|..+..- .....+.+...|+..-+..-+
T Consensus 83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r 162 (321)
T PTZ00325 83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR 162 (321)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence 9997433 4567889999999999999999999999999999777322 122333444566664222222
Q ss_pred --HHHhhCCCEEEEeecceeeC
Q psy4233 162 --EVLREFPEATIFRPSDMYGS 181 (303)
Q Consensus 162 --~~~~~~~~~~ilrp~~~~G~ 181 (303)
+.+..++....++ +.++|.
T Consensus 163 ~~la~~l~v~~~~V~-~~VlGe 183 (321)
T PTZ00325 163 KFVAEALGMNPYDVN-VPVVGG 183 (321)
T ss_pred HHHHHHhCcChhheE-EEEEee
Confidence 2222467777777 788884
No 295
>PLN00106 malate dehydrogenase
Probab=99.06 E-value=1.7e-09 Score=93.95 Aligned_cols=160 Identities=15% Similarity=0.058 Sum_probs=110.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
+.||+|+||+|.||+.++..|..++ .++.+++..+ .......+.--.. .....++.+.+++.+.++++|+|||+|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a~Dl~~~~~--~~~i~~~~~~~d~~~~l~~aDiVVitA 94 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVAADVSHINT--PAQVRGFLGDDQLGDALKGADLVIIPA 94 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeEchhhhCCc--CceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence 4599999999999999999999776 5899998865 2111111110001 112234444556778899999999999
Q ss_pred ccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC--------CCCCCCCCCCchhHHHHHHHHHHH-
Q psy4233 96 GREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN--------PPTYYISGGSQFYRTKYQGEKEVL- 164 (303)
Q Consensus 96 ~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~--------~~~~~~~~~~~y~~~K~~~e~~~~- 164 (303)
|.... ..+.+....|...++++++.+++++.+.+|+++|--+.+. .....+.+...|+..+...+++-.
T Consensus 95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~ 174 (323)
T PLN00106 95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTF 174 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHH
Confidence 97432 4567889999999999999999999999999998766521 122334555677777766655332
Q ss_pred ---hhCCCEEEEeecceeeC
Q psy4233 165 ---REFPEATIFRPSDMYGS 181 (303)
Q Consensus 165 ---~~~~~~~ilrp~~~~G~ 181 (303)
..+++...+. +.++|.
T Consensus 175 lA~~lgv~~~~V~-~~ViGe 193 (323)
T PLN00106 175 VAEKKGLDPADVD-VPVVGG 193 (323)
T ss_pred HHHHhCCChhheE-EEEEEe
Confidence 2467666665 556663
No 296
>PRK06720 hypothetical protein; Provisional
Probab=99.06 E-value=3.4e-09 Score=83.84 Aligned_cols=84 Identities=20% Similarity=0.241 Sum_probs=63.4
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhc-CCCCceEEEecCCCCHHHHHHHh-------
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAI------- 85 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~------- 85 (303)
+.+++++++||||+|.||..+++.|.++|++|+++.|+........... ....+..++.+|++|.+++.+++
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4456789999999999999999999999999999998754321111111 11234678899999998887754
Q ss_pred cccCEEEEcccc
Q psy4233 86 KYSNVVINLIGR 97 (303)
Q Consensus 86 ~~~D~vi~~a~~ 97 (303)
.++|++||+||.
T Consensus 92 G~iDilVnnAG~ 103 (169)
T PRK06720 92 SRIDMLFQNAGL 103 (169)
T ss_pred CCCCEEEECCCc
Confidence 348999999986
No 297
>KOG1199|consensus
Probab=99.04 E-value=7.7e-10 Score=84.62 Aligned_cols=209 Identities=16% Similarity=0.149 Sum_probs=144.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc-------c
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY-------S 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~ 88 (303)
..+...+|||+...+|...++.|..+|..|.+++-..++..+..+..+ .++.+...|+++..++..++.. .
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg--~~~vf~padvtsekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG--GKVVFTPADVTSEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC--CceEEeccccCcHHHHHHHHHHHHhhccce
Confidence 456678999999999999999999999999999886655555544444 5689999999999998887643 6
Q ss_pred CEEEEccccCc--------------cccchhhhhhhcchHHHHHHHHHh--------cCCc--eEEEEecCccCCCCCCC
Q psy4233 89 NVVINLIGREF--------------ATKNFTIADANVEIPARLARLSKE--------MGVE--KFIHISALNADPNPPTY 144 (303)
Q Consensus 89 D~vi~~a~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~--------~~~~--~~v~~Ss~~~~~~~~~~ 144 (303)
|+.++|||... .+.-+...++|+.++.|+++.... .+-+ -+|.+.|..+|..+-
T Consensus 85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~-- 162 (260)
T KOG1199|consen 85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT-- 162 (260)
T ss_pred eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc--
Confidence 99999999511 123356788999999998886532 1112 455555666665432
Q ss_pred CCCCCCchhHHHHHHHH----HHHhh---CCCEEEEeecceeeCCCchhhHHHHHHHh-hhcceeeecCCCceeeCceeH
Q psy4233 145 YISGGSQFYRTKYQGEK----EVLRE---FPEATIFRPSDMYGSGDKFLRYYGHMWRH-VFRKLAVYKKGEETIKQPVYV 216 (303)
Q Consensus 145 ~~~~~~~y~~~K~~~e~----~~~~~---~~~~~ilrp~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~ 216 (303)
....|+.+|...-- +.++. |+++..+-||.+-.|-... ++...+. ....+|++ .-+-|.
T Consensus 163 ---gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss---lpekv~~fla~~ipfp-------srlg~p 229 (260)
T KOG1199|consen 163 ---GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS---LPEKVKSFLAQLIPFP-------SRLGHP 229 (260)
T ss_pred ---chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh---hhHHHHHHHHHhCCCc-------hhcCCh
Confidence 34678888876443 23333 7889999998876563321 1111111 22344543 224677
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEeC
Q psy4233 217 GDVAAAIVAACKDPDAAGKIYQAVG 241 (303)
Q Consensus 217 ~Dva~~~~~~~~~~~~~g~~~~i~~ 241 (303)
.+.+..+...++++...|++..+.+
T Consensus 230 ~eyahlvqaiienp~lngevir~dg 254 (260)
T KOG1199|consen 230 HEYAHLVQAIIENPYLNGEVIRFDG 254 (260)
T ss_pred HHHHHHHHHHHhCcccCCeEEEecc
Confidence 8888888889999888888887754
No 298
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.99 E-value=1.8e-09 Score=95.01 Aligned_cols=98 Identities=24% Similarity=0.264 Sum_probs=78.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
||+|+|.|| |+||+.++..|+++| ++|++.+|+..+..+-.... .++++.+++|..|.+.+.+++++.|+||+++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--GGKVEALQVDAADVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--cccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence 689999998 999999999999999 99999999865543332221 13799999999999999999999999999998
Q ss_pred cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233 97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133 (303)
Q Consensus 97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 133 (303)
.... ..++++|-+.|+ ++|=+|
T Consensus 78 ~~~~--------------~~i~ka~i~~gv-~yvDts 99 (389)
T COG1748 78 PFVD--------------LTILKACIKTGV-DYVDTS 99 (389)
T ss_pred chhh--------------HHHHHHHHHhCC-CEEEcc
Confidence 6421 167888888887 555444
No 299
>KOG1014|consensus
Probab=98.95 E-value=8.5e-09 Score=86.72 Aligned_cols=160 Identities=14% Similarity=0.022 Sum_probs=110.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC--CCCceEEEecCCCCHHH----HHHHhcc--cCE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG--DLGQVLFQPYHPRNDDE----IRKAIKY--SNV 90 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~----~~~~~~~--~D~ 90 (303)
.=..|||||..||.+.+++|.++|.+|++++|+.++.....+... ..-++..+..|+++.+. +.+.+.+ +-+
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 458999999999999999999999999999998654433222221 12347888999987664 4555555 568
Q ss_pred EEEccccCccc----------cchhhhhhhcchHHHHHHHH----HhcCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 91 VINLIGREFAT----------KNFTIADANVEIPARLARLS----KEMGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 91 vi~~a~~~~~~----------~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
+|||+|...+. .-+....+|..++..+.+.. .+.+-.-||++||...... ..-...|+.+|
T Consensus 130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p-----~p~~s~ysasK 204 (312)
T KOG1014|consen 130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP-----TPLLSVYSASK 204 (312)
T ss_pred EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc-----ChhHHHHHHHH
Confidence 99999975421 22356677777765555544 2333347999998877642 23346799999
Q ss_pred HHHHHHHHh-------hCCCEEEEeecceeeCCC
Q psy4233 157 YQGEKEVLR-------EFPEATIFRPSDMYGSGD 183 (303)
Q Consensus 157 ~~~e~~~~~-------~~~~~~ilrp~~~~G~~~ 183 (303)
...+..-+. .|+.+-.+-|..|-++..
T Consensus 205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 977765433 367788888888876543
No 300
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.95 E-value=6.6e-09 Score=90.79 Aligned_cols=162 Identities=12% Similarity=0.030 Sum_probs=101.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCCCcc-cccchhcCCCCceE-EEecCCCCHHHHHHHhccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGNFYD-VRDLRLCGDLGQVL-FQPYHPRNDDEIRKAIKYS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~-~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~ 88 (303)
+.||+||||+|+||++++..|+..+ .++++++++.... .+.... +..... ....|+.+..++.+.++++
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~--Dl~d~~~~~~~~~~~~~~~~~~l~~a 79 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVM--ELQDCAFPLLKSVVATTDPEEAFKDV 79 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceee--ehhhccccccCCceecCCHHHHhCCC
Confidence 5689999999999999999999854 4899999964321 111110 001110 1223544456677888999
Q ss_pred CEEEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEecCcc------CCCCCCCCCC--CCCchhHHH
Q psy4233 89 NVVINLIGREFA--TKNFTIADANVEIPARLARLSKEMG-VE-KFIHISALNA------DPNPPTYYIS--GGSQFYRTK 156 (303)
Q Consensus 89 D~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss~~~------~~~~~~~~~~--~~~~y~~~K 156 (303)
|+|||+||.... ..+.+.++.|+...+.+++.+.++. .. .++.+|...- .......|.. ....+-.+.
T Consensus 80 DiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~ 159 (325)
T cd01336 80 DVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHN 159 (325)
T ss_pred CEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHH
Confidence 999999997533 3457899999999999999888873 33 4555553110 0000011100 112244455
Q ss_pred HHHHHHHHhhCCCEEEEeecceeeC
Q psy4233 157 YQGEKEVLREFPEATIFRPSDMYGS 181 (303)
Q Consensus 157 ~~~e~~~~~~~~~~~ilrp~~~~G~ 181 (303)
+....+.+..+++...++-..++|.
T Consensus 160 R~r~~la~~l~v~~~~v~~~~V~Ge 184 (325)
T cd01336 160 RAKSQIALKLGVPVSDVKNVIIWGN 184 (325)
T ss_pred HHHHHHHHHhCcChhhceEeEEEEc
Confidence 5555565666777777776667774
No 301
>PRK09620 hypothetical protein; Provisional
Probab=98.76 E-value=3.2e-08 Score=81.93 Aligned_cols=81 Identities=14% Similarity=0.073 Sum_probs=56.7
Q ss_pred CCcEEEEEcCC----------------ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHH
Q psy4233 17 NGVVATVFGAS----------------GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDE 80 (303)
Q Consensus 17 ~~~~vlVtGat----------------G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 80 (303)
.+++||||+|. ||+|++|+++|+++|++|+++++.......... ...+...+.++....+.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~---~~~~~~~V~s~~d~~~~ 78 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN---NQLELHPFEGIIDLQDK 78 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC---CceeEEEEecHHHHHHH
Confidence 57899999875 999999999999999999998764321111110 01224456664444467
Q ss_pred HHHHhc--ccCEEEEccccCcc
Q psy4233 81 IRKAIK--YSNVVINLIGREFA 100 (303)
Q Consensus 81 ~~~~~~--~~D~vi~~a~~~~~ 100 (303)
+.+++. ++|+|||+|+..+.
T Consensus 79 l~~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 79 MKSIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HHHHhcccCCCEEEECccccce
Confidence 777785 58999999997443
No 302
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.74 E-value=6e-08 Score=80.60 Aligned_cols=78 Identities=9% Similarity=0.117 Sum_probs=53.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC--HHHHHHHhcccCEEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN--DDEIRKAIKYSNVVIN 93 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~D~vi~ 93 (303)
+.+-+++=-.+|||+|.+|+++|+++|++|+++.|....... ...+++++.++..+ .+.+.+.++++|+|||
T Consensus 14 iD~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh 87 (229)
T PRK06732 14 IDSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIH 87 (229)
T ss_pred cCCceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCC------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEe
Confidence 344333333679999999999999999999999875321110 01346666654322 2456667778999999
Q ss_pred ccccCc
Q psy4233 94 LIGREF 99 (303)
Q Consensus 94 ~a~~~~ 99 (303)
+|+..+
T Consensus 88 ~AAvsd 93 (229)
T PRK06732 88 SMAVSD 93 (229)
T ss_pred CCccCC
Confidence 999854
No 303
>PRK05086 malate dehydrogenase; Provisional
Probab=98.72 E-value=1.3e-07 Score=82.34 Aligned_cols=114 Identities=17% Similarity=0.117 Sum_probs=79.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHh-C--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGK-Q--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~-~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
|||+|+||||.+|++++..|.. . ++++++++|++........+. +.+....+.+ .+.+++.+.++++|+||.++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~-~~~~~~~i~~--~~~~d~~~~l~~~DiVIita 77 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLS-HIPTAVKIKG--FSGEDPTPALEGADVVLISA 77 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhh-cCCCCceEEE--eCCCCHHHHcCCCCEEEEcC
Confidence 6999999999999999988854 2 367888888643211111111 1011122333 22344556778999999999
Q ss_pred ccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233 96 GREFA--TKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135 (303)
Q Consensus 96 ~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 135 (303)
|.... ..+.+....|....+.+++++++++.+++|.+.|-
T Consensus 78 G~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN 119 (312)
T PRK05086 78 GVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN 119 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 97432 34567889999999999999999998888888764
No 304
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.71 E-value=1.1e-06 Score=70.82 Aligned_cols=217 Identities=13% Similarity=0.140 Sum_probs=126.2
Q ss_pred cCCCcEEEEEcCC--ChhHHHHHHHHHhCCCeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhc-----
Q psy4233 15 SFNGVVATVFGAS--GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIK----- 86 (303)
Q Consensus 15 ~~~~~~vlVtGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 86 (303)
.+++|++||+|-. .-|+..|+++|.++|.++......+ ...+..+ +........+++||+++.++++++|.
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~ 81 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK 81 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence 3678999999964 5699999999999999877765543 2222222 11122235679999999988888775
Q ss_pred --ccCEEEEccccCccc---------cc---hhhhhhhcchHHHHHHHHHhc--CCceEEEEecCccCCCCCCCCCCCCC
Q psy4233 87 --YSNVVINLIGREFAT---------KN---FTIADANVEIPARLARLSKEM--GVEKFIHISALNADPNPPTYYISGGS 150 (303)
Q Consensus 87 --~~D~vi~~a~~~~~~---------~~---~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~ 150 (303)
+.|.++|+.+....+ .. ...+++..-....+.++++.. +-..+|-+|=.+. ..-. .-.+
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs---~r~v--PnYN 156 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS---ERVV--PNYN 156 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc---eeec--CCCc
Confidence 379999999853211 11 123333333334444444431 1124443332111 1111 1236
Q ss_pred chhHHHHHHHHHHHhh-------CCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHH
Q psy4233 151 QFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 151 ~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 223 (303)
..+.+|+..|.-++.. |+++..+-.|-+-.-....+..+..+++......|+ +..++.+||+..-
T Consensus 157 vMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl--------~r~vt~eeVG~tA 228 (259)
T COG0623 157 VMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL--------RRNVTIEEVGNTA 228 (259)
T ss_pred hhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc--------cCCCCHHHhhhhH
Confidence 7899999999887764 334433333222111112233344444433333443 3457899999999
Q ss_pred HHHhcC--CCCCCcEEEEeCCccc
Q psy4233 224 VAACKD--PDAAGKIYQAVGPKRY 245 (303)
Q Consensus 224 ~~~~~~--~~~~g~~~~i~~~~~~ 245 (303)
++++.. ....|++.++.+|-.+
T Consensus 229 ~fLlSdLssgiTGei~yVD~G~~i 252 (259)
T COG0623 229 AFLLSDLSSGITGEIIYVDSGYHI 252 (259)
T ss_pred HHHhcchhcccccceEEEcCCcee
Confidence 999874 3347888888877553
No 305
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.67 E-value=8.7e-08 Score=86.36 Aligned_cols=94 Identities=23% Similarity=0.288 Sum_probs=68.0
Q ss_pred EEEEcCCChhHHHHHHHHHhCC-C-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQG-S-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g-~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
|+|.|| |++|+.+++.|.+++ + +|++.+|+........... ...+++.+++|+.|.+++.++++++|+||||++..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 799999 999999999999987 4 8999999855432222111 33679999999999999999999999999999874
Q ss_pred ccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233 99 FATKNFTIADANVEIPARLARLSKEMGVEKFIH 131 (303)
Q Consensus 99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 131 (303)
. ...++++|.++|+ ++|-
T Consensus 79 ~--------------~~~v~~~~i~~g~-~yvD 96 (386)
T PF03435_consen 79 F--------------GEPVARACIEAGV-HYVD 96 (386)
T ss_dssp G--------------HHHHHHHHHHHT--EEEE
T ss_pred h--------------hHHHHHHHHHhCC-Ceec
Confidence 1 1257777777776 6664
No 306
>KOG1204|consensus
Probab=98.63 E-value=7.8e-08 Score=77.23 Aligned_cols=198 Identities=12% Similarity=0.027 Sum_probs=120.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEE--EeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-------cc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQII--IPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-------YS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~--~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 88 (303)
.+.+||||++..||..++..+.+++-++. +..|.... .+.++.... .......+|+.....+.+.++ +-
T Consensus 6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGKR 83 (253)
T ss_pred ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence 34699999999999999999999886543 33333222 222111100 112333444444433333322 26
Q ss_pred CEEEEccccCc-----------cccchhhhhhhcchHHHHHHHHHh----cC-CceEEEEecCccCCCCCCCCCCCCCch
Q psy4233 89 NVVINLIGREF-----------ATKNFTIADANVEIPARLARLSKE----MG-VEKFIHISALNADPNPPTYYISGGSQF 152 (303)
Q Consensus 89 D~vi~~a~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~y 152 (303)
|.|||+||... ...++.+++.|+.....|...+.. .+ .+-+|++||...-. |......|
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~-----p~~~wa~y 158 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR-----PFSSWAAY 158 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc-----cccHHHHh
Confidence 99999999622 134567999999998888876643 22 25789999987754 44667789
Q ss_pred hHHHHHHHHHHHhh------CCCEEEEeecceeeCCCchhh----HHHHHHHhhhcceeeecCCCceeeCceeHHHHHHH
Q psy4233 153 YRTKYQGEKEVLRE------FPEATIFRPSDMYGSGDKFLR----YYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAA 222 (303)
Q Consensus 153 ~~~K~~~e~~~~~~------~~~~~ilrp~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 222 (303)
+-+|++.+.++... ++.+..++||.+=.+.+.... .-+..... .+.. ... -..+...+.|+.
T Consensus 159 c~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~-f~el------~~~-~~ll~~~~~a~~ 230 (253)
T KOG1204|consen 159 CSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKM-FKEL------KES-GQLLDPQVTAKV 230 (253)
T ss_pred hhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHH-HHHH------Hhc-CCcCChhhHHHH
Confidence 99999999888764 467777888877544221110 11111110 0000 111 246788889999
Q ss_pred HHHHhcCC
Q psy4233 223 IVAACKDP 230 (303)
Q Consensus 223 ~~~~~~~~ 230 (303)
+..++++.
T Consensus 231 l~~L~e~~ 238 (253)
T KOG1204|consen 231 LAKLLEKG 238 (253)
T ss_pred HHHHHHhc
Confidence 99988864
No 307
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.63 E-value=2.8e-07 Score=77.48 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=70.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a~ 96 (303)
|+|||+||||. |..|++.|.+.|++|++.+++...... +.. .+...+..+..|.+++.+.+.+ +|+||+++.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~-~~~----~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHL-YPI----HQALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccc-ccc----cCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 68999999999 999999999999999999997643222 111 1133455666788888888865 999999987
Q ss_pred cCccccchhhhhhhcchHHHHHHHHHhcCCce
Q psy4233 97 REFATKNFTIADANVEIPARLARLSKEMGVEK 128 (303)
Q Consensus 97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 128 (303)
+.. ...+.++.++|++.+++.
T Consensus 75 PfA-----------~~is~~a~~a~~~~~ipy 95 (256)
T TIGR00715 75 PFA-----------AQITTNATAVCKELGIPY 95 (256)
T ss_pred HHH-----------HHHHHHHHHHHHHhCCcE
Confidence 642 235668999999999853
No 308
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.61 E-value=1.2e-07 Score=77.02 Aligned_cols=84 Identities=18% Similarity=0.154 Sum_probs=63.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
+++.++++|+||+|.+|+.+++.|.+.|++|++++|+...............+.+...+|..+.+++.+.++++|+||++
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 45678999999999999999999999999999999875322211111111123556677888999999999999999998
Q ss_pred cccC
Q psy4233 95 IGRE 98 (303)
Q Consensus 95 a~~~ 98 (303)
.+..
T Consensus 105 t~~g 108 (194)
T cd01078 105 GAAG 108 (194)
T ss_pred CCCC
Confidence 7643
No 309
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.51 E-value=8.6e-07 Score=77.41 Aligned_cols=103 Identities=12% Similarity=0.035 Sum_probs=74.6
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCCCcccccchhcCCCCceEEEecCCCCH-----------HHH
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND-----------DEI 81 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----------~~~ 81 (303)
||.|+||+|.||+.++..|+..| +++.+++++... + ..+-...|+.|. ...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--~---------~~~g~~~Dl~d~~~~~~~~~~i~~~~ 70 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--K---------ALEGVVMELQDCAFPLLKGVVITTDP 70 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--C---------ccceeeeehhhhcccccCCcEEecCh
Confidence 79999999999999999999766 258888886421 1 122223333332 345
Q ss_pred HHHhcccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEe
Q psy4233 82 RKAIKYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMG-VE-KFIHIS 133 (303)
Q Consensus 82 ~~~~~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~S 133 (303)
.+.++++|+|||+||... .....+.++.|....+.++..++++. .. .++.+|
T Consensus 71 ~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 71 EEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred HHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 678899999999999742 34667899999999999999999883 54 445444
No 310
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.47 E-value=1.2e-06 Score=76.41 Aligned_cols=158 Identities=13% Similarity=0.084 Sum_probs=103.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCC-------eEEEeecCCCcc-cccchhcC-C-----CCceEEEecCCCCHHHHHH
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGS-------QIIIPYRGNFYD-VRDLRLCG-D-----LGQVLFQPYHPRNDDEIRK 83 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~~~-~~~~~~~~-~-----~~~~~~~~~Dl~d~~~~~~ 83 (303)
++||.|+||+|.||+.++..|+..|. ++.+++...... ........ + ..++++ . ....+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~------~~~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T------DDPNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e------cCcHH
Confidence 57999999999999999999998773 788888853321 11111100 0 011221 1 12245
Q ss_pred HhcccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCC-c-eEEEEecCcc---CCCCCCCC-CCCCCchhHH
Q psy4233 84 AIKYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKEMGV-E-KFIHISALNA---DPNPPTYY-ISGGSQFYRT 155 (303)
Q Consensus 84 ~~~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~v~~Ss~~~---~~~~~~~~-~~~~~~y~~~ 155 (303)
.++++|+||.+||... ...+.+..+.|....+.+....+++.. . .++.+|...- |--....+ ..+...|+.+
T Consensus 75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t 154 (322)
T cd01338 75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMT 154 (322)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEeh
Confidence 6789999999999742 345678899999999999999988773 4 4554543110 00001111 2345678888
Q ss_pred HHHHHHHHHh----hCCCEEEEeecceeeCC
Q psy4233 156 KYQGEKEVLR----EFPEATIFRPSDMYGSG 182 (303)
Q Consensus 156 K~~~e~~~~~----~~~~~~ilrp~~~~G~~ 182 (303)
++..+++... .+++...+|...+||+.
T Consensus 155 ~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH 185 (322)
T cd01338 155 RLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH 185 (322)
T ss_pred HHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence 8887776544 37888889988899985
No 311
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.47 E-value=1e-05 Score=71.39 Aligned_cols=80 Identities=13% Similarity=0.039 Sum_probs=57.7
Q ss_pred CcEEEEEcCCChhHHH--HHHHHHhCCCeEEEeecCCCcccc-----------cch-hcCC-CCceEEEecCCCCHHHHH
Q psy4233 18 GVVATVFGASGYMGSY--LCNKLGKQGSQIIIPYRGNFYDVR-----------DLR-LCGD-LGQVLFQPYHPRNDDEIR 82 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~--l~~~Ll~~g~~V~~~~R~~~~~~~-----------~~~-~~~~-~~~~~~~~~Dl~d~~~~~ 82 (303)
++++|||||++.+|.+ ++++| +.|.+|+++++....... .+. .... ...+..+.+|+++++++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 6799999999999999 89999 999999888753211110 111 1111 123678899999988877
Q ss_pred HHhc-------ccCEEEEccccC
Q psy4233 83 KAIK-------YSNVVINLIGRE 98 (303)
Q Consensus 83 ~~~~-------~~D~vi~~a~~~ 98 (303)
++++ ++|++||+++..
T Consensus 120 ~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHhcCCCCEEEECCccC
Confidence 6553 479999999864
No 312
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.40 E-value=2.5e-06 Score=74.54 Aligned_cols=103 Identities=14% Similarity=0.040 Sum_probs=74.4
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC-------CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHH-----------HH
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG-------SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDD-----------EI 81 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-----------~~ 81 (303)
+|.|+||+|.||+.++..|...+ ++++++++.+... +.+-...|+.|.. +.
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------~a~g~~~Dl~d~~~~~~~~~~~~~~~ 69 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------VLEGVVMELMDCAFPLLDGVVPTHDP 69 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------ccceeEeehhcccchhcCceeccCCh
Confidence 58999999999999999999755 2688888864321 1222233343332 34
Q ss_pred HHHhcccCEEEEccccCcc--ccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEe
Q psy4233 82 RKAIKYSNVVINLIGREFA--TKNFTIADANVEIPARLARLSKEMG-VE-KFIHIS 133 (303)
Q Consensus 82 ~~~~~~~D~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~S 133 (303)
.+.++++|+||++||.... ..+.+..+.|+...+.+.+...++. .+ .++.+|
T Consensus 70 ~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 70 AVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred HHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 5678899999999997533 3467888999999999999999984 54 455544
No 313
>KOG1478|consensus
Probab=98.37 E-value=3.6e-06 Score=68.79 Aligned_cols=165 Identities=14% Similarity=0.049 Sum_probs=109.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCC-----eEEEeecCCCccccc---chhc-C-CCCceEEEecCCCCHHHHHHH--
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGS-----QIIIPYRGNFYDVRD---LRLC-G-DLGQVLFQPYHPRNDDEIRKA-- 84 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-----~V~~~~R~~~~~~~~---~~~~-~-~~~~~~~~~~Dl~d~~~~~~~-- 84 (303)
+.+.++|||++..+|-+|+..|++..- .+.+..|+-++..+. ++.. . ..-+++++..|+++..++..+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 346789999999999999999998752 345556764443222 1111 1 113488999999987665554
Q ss_pred -----hcccCEEEEccccCcc-----------------------------------ccchhhhhhhcchHHHHHHHHHhc
Q psy4233 85 -----IKYSNVVINLIGREFA-----------------------------------TKNFTIADANVEIPARLARLSKEM 124 (303)
Q Consensus 85 -----~~~~D~vi~~a~~~~~-----------------------------------~~~~~~~~~n~~~~~~l~~~~~~~ 124 (303)
+...|+|+-+||.+.. +.-...++.|+-|.--+++.....
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 4457999999985211 122467888998887777765432
Q ss_pred ----CCceEEEEecCccCCCC---CC-CCCCCCCchhHHHHHHHHHHHhh-------CCCEEEEeecceeeC
Q psy4233 125 ----GVEKFIHISALNADPNP---PT-YYISGGSQFYRTKYQGEKEVLRE-------FPEATIFRPSDMYGS 181 (303)
Q Consensus 125 ----~~~~~v~~Ss~~~~~~~---~~-~~~~~~~~y~~~K~~~e~~~~~~-------~~~~~ilrp~~~~G~ 181 (303)
...++|.+||..+.... ++ +-.....+|.-+|...+-.--+. |+.-.++.||.....
T Consensus 162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 23499999999886542 11 12245678999999988644332 456667788777654
No 314
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.29 E-value=4.6e-05 Score=68.18 Aligned_cols=175 Identities=11% Similarity=0.064 Sum_probs=105.4
Q ss_pred cCCCcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH
Q psy4233 15 SFNGVVATVFGA----------------SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78 (303)
Q Consensus 15 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 78 (303)
.+++++|+|||| ||.+|.+++++|..+|++|+++.+...... ...+ ...|+.+.
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~--------~~~~--~~~~v~~~ 251 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT--------PPGV--KSIKVSTA 251 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC--------CCCc--EEEEeccH
Confidence 367899999998 478999999999999999999887643211 0122 45677888
Q ss_pred HHH-HHHh----cccCEEEEccccCccccc----------hhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC
Q psy4233 79 DEI-RKAI----KYSNVVINLIGREFATKN----------FTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT 143 (303)
Q Consensus 79 ~~~-~~~~----~~~D~vi~~a~~~~~~~~----------~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~ 143 (303)
+++ ..++ .+.|++|++|+..+.... ......++..+..+++..++...+++ .++=.....
T Consensus 252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~-lvgF~aEt~---- 326 (390)
T TIGR00521 252 EEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQV-IVGFKAETN---- 326 (390)
T ss_pred HHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcE-EEEEEcCCC----
Confidence 777 4444 358999999997433211 12234677788888888876543333 222111111
Q ss_pred CCCCCCCchhHHHHHHHHHHHhhCCCEEEEeecc--eeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHH
Q psy4233 144 YYISGGSQFYRTKYQGEKEVLREFPEATIFRPSD--MYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAA 221 (303)
Q Consensus 144 ~~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 221 (303)
+. ..-.+.+.+++.+.++++...-. -+|.. ......+..++... ....+=.++|+
T Consensus 327 ------~~---l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~-------------~n~~~li~~~~~~~-~~~~~K~~iA~ 383 (390)
T TIGR00521 327 ------DD---LIKYAKEKLKKKNLDMIVANDVSQRGFGSD-------------ENEVYIFSKHGHKE-LPLMSKLEVAE 383 (390)
T ss_pred ------cH---HHHHHHHHHHHcCCCEEEEccCCccccCCC-------------CcEEEEEECCCeEE-eCCCCHHHHHH
Confidence 11 34445566677789988876421 12221 11222223232222 44556778888
Q ss_pred HHHHHh
Q psy4233 222 AIVAAC 227 (303)
Q Consensus 222 ~~~~~~ 227 (303)
.++..+
T Consensus 384 ~i~~~~ 389 (390)
T TIGR00521 384 RILDEI 389 (390)
T ss_pred HHHHHh
Confidence 887654
No 315
>KOG2733|consensus
Probab=98.29 E-value=2e-06 Score=73.54 Aligned_cols=78 Identities=22% Similarity=0.382 Sum_probs=62.5
Q ss_pred EEEEEcCCChhHHHHHHHHHh----CCCeEEEeecCCCcccccchhcC-----CCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233 20 VATVFGASGYMGSYLCNKLGK----QGSQIIIPYRGNFYDVRDLRLCG-----DLGQVLFQPYHPRNDDEIRKAIKYSNV 90 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D~ 90 (303)
-+.|.|||||.|..+++++++ .|...-+..|+..+..+.+...+ +++...++.+|.+|++++.+..+.+-+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 589999999999999999999 56777777887655444433221 223344899999999999999999999
Q ss_pred EEEcccc
Q psy4233 91 VINLIGR 97 (303)
Q Consensus 91 vi~~a~~ 97 (303)
|+||+|+
T Consensus 87 ivN~vGP 93 (423)
T KOG2733|consen 87 IVNCVGP 93 (423)
T ss_pred EEecccc
Confidence 9999997
No 316
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.29 E-value=3.1e-06 Score=75.88 Aligned_cols=179 Identities=9% Similarity=0.036 Sum_probs=103.8
Q ss_pred cCCCcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH
Q psy4233 15 SFNGVVATVFGA----------------SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78 (303)
Q Consensus 15 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 78 (303)
.+++++|+|||| +|.+|.+++++|.++|++|+++++... ... ..+ +...|+++.
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~--~~~------~~~--~~~~dv~~~ 254 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN--LPT------PAG--VKRIDVESA 254 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc--ccC------CCC--cEEEccCCH
Confidence 467889999999 999999999999999999999988642 111 012 235688888
Q ss_pred HHHHHHh----cccCEEEEccccCccccc----------hhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC
Q psy4233 79 DEIRKAI----KYSNVVINLIGREFATKN----------FTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY 144 (303)
Q Consensus 79 ~~~~~~~----~~~D~vi~~a~~~~~~~~----------~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~ 144 (303)
+++.+.+ .++|++||+||..+.... .......+.-+..++..+++...++-+.++ |.-
T Consensus 255 ~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VG----Faa---- 326 (399)
T PRK05579 255 QEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVG----FAA---- 326 (399)
T ss_pred HHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEE----Ecc----
Confidence 7777655 358999999997432211 011223445555677777654432202222 110
Q ss_pred CCCCCCchhHHHHHHHHHHHhhCCCEEEEeecceeeCCCchhhHHHHHHHhhhcceeee-cCCCceeeCceeHHHHHHHH
Q psy4233 145 YISGGSQFYRTKYQGEKEVLREFPEATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVY-KKGEETIKQPVYVGDVAAAI 223 (303)
Q Consensus 145 ~~~~~~~y~~~K~~~e~~~~~~~~~~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~ 223 (303)
..+ ...-.+.+-+.+.+.++++...-. ++.++... ...+.++ .++........+=.++|+.|
T Consensus 327 ---Et~---~~~~~A~~kl~~k~~D~ivaN~i~---~~~~fg~~--------~n~~~ii~~~~~~~~~~~~~K~~iA~~i 389 (399)
T PRK05579 327 ---ETG---DVLEYARAKLKRKGLDLIVANDVS---AGGGFGSD--------DNEVTLIWSDGGEVKLPLMSKLELARRL 389 (399)
T ss_pred ---CCc---hHHHHHHHHHHHcCCeEEEEecCC---cCCCcCCC--------ceEEEEEECCCcEEEcCCCCHHHHHHHH
Confidence 001 112334455566688888776521 11111111 1223333 23332224556778888888
Q ss_pred HHHhc
Q psy4233 224 VAACK 228 (303)
Q Consensus 224 ~~~~~ 228 (303)
+..+.
T Consensus 390 ~~~i~ 394 (399)
T PRK05579 390 LDEIA 394 (399)
T ss_pred HHHHH
Confidence 87664
No 317
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.27 E-value=4.1e-07 Score=69.72 Aligned_cols=107 Identities=20% Similarity=0.240 Sum_probs=74.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhc------CCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLC------GDLGQVLFQPYHPRNDDEIRKAIKYSNV 90 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~D~ 90 (303)
|||.|+||+|.+|++++..|+..+ .++.++++..... +..... .......+.. .+.+ .++++|+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~-~g~a~Dl~~~~~~~~~~~~i~~---~~~~----~~~~aDi 72 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKA-EGEALDLSHASAPLPSPVRITS---GDYE----ALKDADI 72 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHH-HHHHHHHHHHHHGSTEEEEEEE---SSGG----GGTTESE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccc-eeeehhhhhhhhhccccccccc---cccc----ccccccE
Confidence 699999999999999999999987 6899998874321 111100 0001122222 2333 4678999
Q ss_pred EEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233 91 VINLIGRE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS 133 (303)
Q Consensus 91 vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 133 (303)
||.++|.. ......+.++.|....+.+++...+.+.+ .++.+|
T Consensus 73 vvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 73 VVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp EEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred EEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 99999974 23556788899999999999999998754 444444
No 318
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.22 E-value=2.9e-06 Score=74.05 Aligned_cols=73 Identities=18% Similarity=0.327 Sum_probs=52.8
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhC-C-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQ-G-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVI 92 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~-g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi 92 (303)
.+++++|+||||+|+||+.++++|+++ | .+++++.|+.. ....+.. ++..+++ .++.+.+.++|+||
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~-rl~~La~-------el~~~~i---~~l~~~l~~aDiVv 220 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQE-RLQELQA-------ELGGGKI---LSLEEALPEADIVV 220 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHH-HHHHHHH-------HhccccH---HhHHHHHccCCEEE
Confidence 466889999999999999999999865 5 68888888643 2222211 1112333 34668889999999
Q ss_pred EccccC
Q psy4233 93 NLIGRE 98 (303)
Q Consensus 93 ~~a~~~ 98 (303)
|+++..
T Consensus 221 ~~ts~~ 226 (340)
T PRK14982 221 WVASMP 226 (340)
T ss_pred ECCcCC
Confidence 999874
No 319
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=98.22 E-value=5.5e-06 Score=73.88 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=67.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH-HhcccCEEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK-AIKYSNVVIN 93 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~D~vi~ 93 (303)
.++|||+|.||||++|+.+++.|.++ ++++..++++.... +.+.. ....+...|+.+.++++. .++++|+||.
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-~~i~~----~~~~l~~~~~~~~~~~~~~~~~~~DvVf~ 110 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG-QSFGS----VFPHLITQDLPNLVAVKDADFSDVDAVFC 110 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-CCchh----hCccccCccccceecCCHHHhcCCCEEEE
Confidence 35779999999999999999999998 57999988853321 11110 011122234433333332 2578999999
Q ss_pred ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC
Q psy4233 94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140 (303)
Q Consensus 94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~ 140 (303)
+.+.. .+..++..++ .+ .++|-+|+..-+.+
T Consensus 111 Alp~~--------------~s~~i~~~~~-~g-~~VIDlSs~fRl~~ 141 (381)
T PLN02968 111 CLPHG--------------TTQEIIKALP-KD-LKIVDLSADFRLRD 141 (381)
T ss_pred cCCHH--------------HHHHHHHHHh-CC-CEEEEcCchhccCC
Confidence 87642 3446677663 45 48999998876554
No 320
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=98.14 E-value=2.2e-05 Score=58.48 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=56.1
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch-hcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR-LCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR 97 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~ 97 (303)
||.|+||||++|+.+++.|.++. .++..+..+..+....+. ........+-+...-.+.+. +.++|+||.|.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEE----LSDVDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHH----HTTESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhH----hhcCCEEEecCch
Confidence 79999999999999999999965 565555444342222211 11111112112211134443 3789999999764
Q ss_pred CccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233 98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136 (303)
Q Consensus 98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 136 (303)
. ..+.+...+.+.|+ ++|=.|+..
T Consensus 77 ~--------------~~~~~~~~~~~~g~-~ViD~s~~~ 100 (121)
T PF01118_consen 77 G--------------ASKELAPKLLKAGI-KVIDLSGDF 100 (121)
T ss_dssp H--------------HHHHHHHHHHHTTS-EEEESSSTT
T ss_pred h--------------HHHHHHHHHhhCCc-EEEeCCHHH
Confidence 2 12356666677777 666444433
No 321
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=98.13 E-value=1.1e-05 Score=70.15 Aligned_cols=115 Identities=21% Similarity=0.226 Sum_probs=72.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCC-cccccchhc-CCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNF-YDVRDLRLC-GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~-~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
|||.|+||||++|+.++..|+..|+ +|++++|... +........ .+.--.......+....+. +.++++|+||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence 6999999999999999999999985 5999999431 111111100 0000000000011111112 348899999999
Q ss_pred cccCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233 95 IGREFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHISA 134 (303)
Q Consensus 95 a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss 134 (303)
+|.... ..+.+..+.|....+.+++.+.+...+ ++|.+++
T Consensus 80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 996432 344678888999999999988887644 5666664
No 322
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.07 E-value=7.1e-05 Score=64.90 Aligned_cols=114 Identities=21% Similarity=0.120 Sum_probs=77.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
|||.|+||+|.||++++-.|+..+ .++.+++.+ ........+.-......+.... ..+++.+.++++|+||.+||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvitaG 77 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIPAG 77 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEeCC
Confidence 599999999999999999999888 578888876 2111111111100111111110 11235567899999999999
Q ss_pred cC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecC
Q psy4233 97 RE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHISAL 135 (303)
Q Consensus 97 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~ 135 (303)
.. ....+.+..+.|....+.+++..++++.+ .++.+|..
T Consensus 78 ~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNP 119 (310)
T cd01337 78 VPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNP 119 (310)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence 74 23466789999999999999999988755 55555543
No 323
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=98.07 E-value=1.8e-05 Score=69.47 Aligned_cols=96 Identities=15% Similarity=0.197 Sum_probs=58.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
+|++|+|+||||++|+.+++.|.+++|. +..+ ++..+.-+.+.. .+ ...++.+.+.. .++++|+||.
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v-~s~~~aG~~l~~----~~---~~l~~~~~~~~--~~~~vD~vFl 72 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLL-ASSESAGHSVPF----AG---KNLRVREVDSF--DFSQVQLAFF 72 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEE-ECcccCCCeecc----CC---cceEEeeCChH--HhcCCCEEEE
Confidence 3579999999999999999999987654 3344 333332222221 11 12333332222 1478999999
Q ss_pred ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233 94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137 (303)
Q Consensus 94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 137 (303)
+++.. ....++..+.++|+ ++|=.|+..-
T Consensus 73 a~p~~--------------~s~~~v~~~~~~G~-~VIDlS~~fR 101 (336)
T PRK05671 73 AAGAA--------------VSRSFAEKARAAGC-SVIDLSGALP 101 (336)
T ss_pred cCCHH--------------HHHHHHHHHHHCCC-eEEECchhhc
Confidence 87631 12247777777776 6776666554
No 324
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=98.05 E-value=3.4e-05 Score=68.01 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=59.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGS---QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
|++|+|.||||++|+++++.|.+++| ++.++++.... .+.+.. .+.+....|+.+. .++++|+||.+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~-g~~l~~----~g~~i~v~d~~~~-----~~~~vDvVf~A 70 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA-GKELSF----KGKELKVEDLTTF-----DFSGVDIALFS 70 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC-CCeeee----CCceeEEeeCCHH-----HHcCCCEEEEC
Confidence 57999999999999999999999876 45777775332 222221 1234444455432 23689999999
Q ss_pred cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233 95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136 (303)
Q Consensus 95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 136 (303)
++.. .++.++..+.++|+ ++|=.|+..
T Consensus 71 ~g~g--------------~s~~~~~~~~~~G~-~VIDlS~~~ 97 (334)
T PRK14874 71 AGGS--------------VSKKYAPKAAAAGA-VVIDNSSAF 97 (334)
T ss_pred CChH--------------HHHHHHHHHHhCCC-EEEECCchh
Confidence 8642 12245555555676 566556543
No 325
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.04 E-value=2.4e-05 Score=64.93 Aligned_cols=97 Identities=22% Similarity=0.260 Sum_probs=71.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIGR 97 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~~ 97 (303)
|+++|.|+ |.+|+.+++.|.++|++|+++.+.+....+.... ....+.+.+|-+|++.+.++ +.++|+++-+.+.
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---ELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---hcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 68999996 9999999999999999999999976543332221 12488999999999999998 7779999988765
Q ss_pred CccccchhhhhhhcchHHHHHHHHH-hcCCceEEEE
Q psy4233 98 EFATKNFTIADANVEIPARLARLSK-EMGVEKFIHI 132 (303)
Q Consensus 98 ~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~v~~ 132 (303)
... |. -++..++ ..|+++++--
T Consensus 77 d~~---------N~----i~~~la~~~~gv~~viar 99 (225)
T COG0569 77 DEV---------NS----VLALLALKEFGVPRVIAR 99 (225)
T ss_pred CHH---------HH----HHHHHHHHhcCCCcEEEE
Confidence 311 21 2444444 4687766633
No 326
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=98.03 E-value=4.2e-05 Score=66.81 Aligned_cols=116 Identities=10% Similarity=0.027 Sum_probs=75.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC--C-----eEEEeecCCCc-ccccchhcCCCCceE-EEecCCCCHHHHHHHhcc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG--S-----QIIIPYRGNFY-DVRDLRLCGDLGQVL-FQPYHPRNDDEIRKAIKY 87 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g--~-----~V~~~~R~~~~-~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~ 87 (303)
++.||.|+||+|+||++++..|+..+ . ++.+++..... ........ +.+.. ....+..-.....+.+++
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~D--l~~~~~~~~~~~~i~~~~~~~~~d 79 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAME--LEDCAFPLLAGVVATTDPEEAFKD 79 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHH--HhhccccccCCcEEecChHHHhCC
Confidence 35799999999999999999999887 3 78888885421 11111110 00110 000011011123456789
Q ss_pred cCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCC-ceEEEEec
Q psy4233 88 SNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGV-EKFIHISA 134 (303)
Q Consensus 88 ~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss 134 (303)
+|+||.+||.. ....+.+....|....+.+++.++++.. +-++.+-|
T Consensus 80 aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 80 VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 99999999974 2346678999999999999999998875 54444443
No 327
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.96 E-value=2.3e-05 Score=67.65 Aligned_cols=81 Identities=16% Similarity=0.205 Sum_probs=59.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCC--cccccch-hc-CCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNF--YDVRDLR-LC-GDLGQVLFQPYHPRNDDEIRKAIKYSNV 90 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~--~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~ 90 (303)
+++++++|+|| |.+|++++.+|.+.|.+ |+++.|+.. +..+.+. .. ...+++.....|+.+.+++...+..+|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 45789999998 89999999999999975 999999752 2222211 11 1113355667888888888888888999
Q ss_pred EEEcccc
Q psy4233 91 VINLIGR 97 (303)
Q Consensus 91 vi~~a~~ 97 (303)
|||+...
T Consensus 203 lINaTp~ 209 (289)
T PRK12548 203 LVNATLV 209 (289)
T ss_pred EEEeCCC
Confidence 9999865
No 328
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.94 E-value=0.00012 Score=63.54 Aligned_cols=112 Identities=18% Similarity=0.131 Sum_probs=75.3
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR 97 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~ 97 (303)
||.|+||+|.||++++-.|+.++ .++.++++.+ .......+.-......+.... +.+++.+.++++|+||.++|.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~ 77 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGV 77 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCC
Confidence 68999999999999999999887 4788888865 221111111111111111101 112355678999999999997
Q ss_pred C--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233 98 E--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHISA 134 (303)
Q Consensus 98 ~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss 134 (303)
. ....+.+....|....+.+++...+++.+ .++.+|.
T Consensus 78 ~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN 117 (312)
T TIGR01772 78 PRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN 117 (312)
T ss_pred CCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 3 23456688899999999999999888755 4555553
No 329
>PRK05442 malate dehydrogenase; Provisional
Probab=97.92 E-value=0.00011 Score=64.36 Aligned_cols=110 Identities=18% Similarity=0.170 Sum_probs=73.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC--C-----eEEEeecCCCc-ccccch--hcC----CCCceEEEecCCCCHHHHH
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG--S-----QIIIPYRGNFY-DVRDLR--LCG----DLGQVLFQPYHPRNDDEIR 82 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g--~-----~V~~~~R~~~~-~~~~~~--~~~----~~~~~~~~~~Dl~d~~~~~ 82 (303)
+++||.|+||+|.+|+.++-.|+..+ . ++.+++..+.. ...... +.- ...++.+ . ....
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~------~~~y 75 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-T------DDPN 75 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-e------cChH
Confidence 46799999999999999999998876 3 78888875432 111111 100 0011111 1 1224
Q ss_pred HHhcccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEe
Q psy4233 83 KAIKYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMG-VE-KFIHIS 133 (303)
Q Consensus 83 ~~~~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~S 133 (303)
+.++++|+||-+||.. ....+.+....|....+.+.+...++. .+ .++.+|
T Consensus 76 ~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 76 VAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 5678999999999963 234667889999999999999999844 33 555555
No 330
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.92 E-value=3.2e-05 Score=65.81 Aligned_cols=76 Identities=18% Similarity=0.262 Sum_probs=55.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
..++|.|||||.|..++++|.++|.+-.+..|+..+ ...+.... +.+.-...+.+++.+.+...+.++|+||+|+.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~k-l~~l~~~L---G~~~~~~p~~~p~~~~~~~~~~~VVlncvGPy 82 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAK-LDALRASL---GPEAAVFPLGVPAALEAMASRTQVVLNCVGPY 82 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHH-HHHHHHhc---CccccccCCCCHHHHHHHHhcceEEEeccccc
Confidence 369999999999999999999999887666776433 33222111 12222333445899999999999999999973
No 331
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.92 E-value=7e-05 Score=66.22 Aligned_cols=101 Identities=22% Similarity=0.120 Sum_probs=61.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEE-ecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQ-PYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
|++|+|+||||++|+.+++.|.++ ++++.++.++.. ..+.+... .+++..+ ..++.+.+.. .++++|+|+.|.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~-~g~~l~~~--~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~al 76 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSS-AGKPLSDV--HPHLRGLVDLVLEPLDPE--ILAGADVVFLAL 76 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccc-cCcchHHh--CcccccccCceeecCCHH--HhcCCCEEEECC
Confidence 579999999999999999999987 478877766422 11111110 0111111 1223333332 456799999987
Q ss_pred ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233 96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138 (303)
Q Consensus 96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~ 138 (303)
+.. ....++..+.++|+ ++|=.|+..-+
T Consensus 77 P~~--------------~~~~~v~~a~~aG~-~VID~S~~fR~ 104 (343)
T PRK00436 77 PHG--------------VSMDLAPQLLEAGV-KVIDLSADFRL 104 (343)
T ss_pred CcH--------------HHHHHHHHHHhCCC-EEEECCcccCC
Confidence 542 12256666666675 78877766554
No 332
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.92 E-value=5.8e-05 Score=60.40 Aligned_cols=128 Identities=8% Similarity=0.072 Sum_probs=66.0
Q ss_pred cCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC--HHHHHHHhcccCEEEEccccCcccc
Q psy4233 25 GASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN--DDEIRKAIKYSNVVINLIGREFATK 102 (303)
Q Consensus 25 GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~D~vi~~a~~~~~~~ 102 (303)
-+||..|.+|++++..+|++|+.+.....- +. ..+++.+...-.+ .+.+.+.+++.|++||+|+..+...
T Consensus 26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~--~~------p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 26 RSSGKMGAALAEEAARRGAEVTLIHGPSSL--PP------PPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVSDFRP 97 (185)
T ss_dssp S--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred CCcCHHHHHHHHHHHHCCCEEEEEecCccc--cc------cccceEEEecchhhhhhhhccccCcceeEEEecchhheee
Confidence 468999999999999999999999886321 11 1357777764221 2334455567899999999754321
Q ss_pred c-----------hhhhhhhcchHHHHHHHHH-hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHHHHHHHhhCCCE
Q psy4233 103 N-----------FTIADANVEIPARLARLSK-EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQGEKEVLREFPEA 170 (303)
Q Consensus 103 ~-----------~~~~~~n~~~~~~l~~~~~-~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~~~~ 170 (303)
. .....+.+..+..++.... ....+.+ .++= ... .+ .....+.+.++..+.++
T Consensus 98 ~~~~~~KIkK~~~~~l~l~L~~~pkIL~~l~~~~~~~~~-lVGF--kaE---------t~---~l~~~A~~kl~~k~~D~ 162 (185)
T PF04127_consen 98 EEPAEGKIKKSSGDELTLELKPTPKILAELRKNKKPNQF-LVGF--KAE---------TE---ELIENAKEKLERKGADL 162 (185)
T ss_dssp SCHHSS-G---TT-CEEEEEEE-GGHGCCHHHHCSTTTE-EEEE--EEE---------SC---HHHHHHHHHHHHCT-SE
T ss_pred hhccccccccccCcceEEEEEeChHHHHHHHhcccCCcE-EEEE--Eec---------CC---cHHHHHHHHhHhhCCCE
Confidence 1 1223334444555565553 3222222 1120 011 11 33334455556678998
Q ss_pred EEEee
Q psy4233 171 TIFRP 175 (303)
Q Consensus 171 ~ilrp 175 (303)
++...
T Consensus 163 IVaN~ 167 (185)
T PF04127_consen 163 IVAND 167 (185)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 88875
No 333
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.92 E-value=5.5e-05 Score=67.12 Aligned_cols=101 Identities=8% Similarity=0.113 Sum_probs=58.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchh---cC---CCCc-eEEEecCCCCHHHHHHHhcc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRL---CG---DLGQ-VLFQPYHPRNDDEIRKAIKY 87 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~---~~---~~~~-~~~~~~Dl~d~~~~~~~~~~ 87 (303)
|++++|+|+||||++|+++++.|.++. .++.++.++..+....... .. .... ..-+...-.+++. +.+
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~ 76 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDD 76 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcC
Confidence 346899999999999999999999876 4888875554332222110 00 0000 0001111123443 357
Q ss_pred cCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233 88 SNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135 (303)
Q Consensus 88 ~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 135 (303)
+|+|+.+.+.. ....+++.+.+.|+ ++|-.|+.
T Consensus 77 ~DvVf~a~p~~--------------~s~~~~~~~~~~G~-~vIDls~~ 109 (349)
T PRK08664 77 VDIVFSALPSD--------------VAGEVEEEFAKAGK-PVFSNASA 109 (349)
T ss_pred CCEEEEeCChh--------------HHHHHHHHHHHCCC-EEEECCch
Confidence 99998875431 12245677777787 55555544
No 334
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.90 E-value=5.5e-05 Score=56.61 Aligned_cols=93 Identities=18% Similarity=0.263 Sum_probs=55.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHh-CCCeEEEe-ecCCCccc-ccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGK-QGSQIIIP-YRGNFYDV-RDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~-~g~~V~~~-~R~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
|||.|.|++|.+|+.+++.+.+ .++++.+. +|+++... ....... +.. .....-.+++.+++..+|++|++.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~---~~~--~~~~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELA---GIG--PLGVPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHC---TSS--T-SSBEBS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhh---CcC--CcccccchhHHHhcccCCEEEEcC
Confidence 6999999999999999999999 56886655 45431111 1110000 000 111112356777888899999986
Q ss_pred ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233 96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIH 131 (303)
Q Consensus 96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 131 (303)
.+ ..+...++.+.++++ ++|.
T Consensus 76 ~p--------------~~~~~~~~~~~~~g~-~~Vi 96 (124)
T PF01113_consen 76 NP--------------DAVYDNLEYALKHGV-PLVI 96 (124)
T ss_dssp -H--------------HHHHHHHHHHHHHT--EEEE
T ss_pred Ch--------------HHhHHHHHHHHhCCC-CEEE
Confidence 32 233457788888786 5553
No 335
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.87 E-value=6.6e-05 Score=69.15 Aligned_cols=77 Identities=16% Similarity=0.069 Sum_probs=55.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
+++++|+|+|+++ +|..+++.|+++|++|++.++......+.........++.++.+|..+ ....++|+||+++
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~ 76 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP 76 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence 5678999999877 999999999999999999988653322111100011247788888765 3456799999999
Q ss_pred ccC
Q psy4233 96 GRE 98 (303)
Q Consensus 96 ~~~ 98 (303)
|..
T Consensus 77 g~~ 79 (450)
T PRK14106 77 GVP 79 (450)
T ss_pred CCC
Confidence 864
No 336
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.78 E-value=8.5e-05 Score=73.75 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=58.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC-Ce-------------EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHH
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG-SQ-------------IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIR 82 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~-------------V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 82 (303)
.+++|+|.|| |++|+.+++.|.+.+ ++ |.+.+++... .+.+. ...++++.+..|+.|.+++.
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~-a~~la--~~~~~~~~v~lDv~D~e~L~ 643 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKD-AKETV--EGIENAEAVQLDVSDSESLL 643 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHH-HHHHH--HhcCCCceEEeecCCHHHHH
Confidence 3779999997 999999999998764 33 6666665332 22221 11246788999999999999
Q ss_pred HHhcccCEEEEcccc
Q psy4233 83 KAIKYSNVVINLIGR 97 (303)
Q Consensus 83 ~~~~~~D~vi~~a~~ 97 (303)
++++++|+||++...
T Consensus 644 ~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 644 KYVSQVDVVISLLPA 658 (1042)
T ss_pred HhhcCCCEEEECCCc
Confidence 999999999999875
No 337
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=97.78 E-value=0.0002 Score=60.77 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=46.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
+|+|+|+|++|.+|+.+++.+.+. +.++.++.....+..... -..++...+++.++++++|+||+++.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----------~~~~i~~~~dl~~ll~~~DvVid~t~ 69 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----------GALGVAITDDLEAVLADADVLIDFTT 69 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----------CCCCccccCCHHHhccCCCEEEECCC
Confidence 479999999999999999998874 588877655433222211 11123334456666678999998874
Q ss_pred c
Q psy4233 97 R 97 (303)
Q Consensus 97 ~ 97 (303)
+
T Consensus 70 p 70 (257)
T PRK00048 70 P 70 (257)
T ss_pred H
Confidence 3
No 338
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.77 E-value=0.00045 Score=60.37 Aligned_cols=108 Identities=17% Similarity=0.162 Sum_probs=73.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCccccc-chhc---CCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRD-LRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~-~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
++||.|+|| |.||+.++-.|+..|. ++.+++++....... ..+. ....++.+. . .+. +.++++|+|
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~----~~~~~adiv 77 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDY----SDCKDADLV 77 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCH----HHhCCCCEE
Confidence 569999998 9999999999999884 799998864432111 1110 000122222 2 122 347899999
Q ss_pred EEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233 92 INLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS 133 (303)
Q Consensus 92 i~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 133 (303)
|.++|... .....+....|....+.+++.+++++.+ .++.+|
T Consensus 78 Iitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 78 VITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 99999732 2456688899999999999999887755 444444
No 339
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.75 E-value=0.00011 Score=67.78 Aligned_cols=74 Identities=18% Similarity=0.205 Sum_probs=59.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEcccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIGR 97 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~~ 97 (303)
|+|+|+|+ |.+|+++++.|.+.|++|+++++++.. .+.+.. ..+++++.+|.++.+.+.++ ++++|+||-+...
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~-~~~~~~---~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEER-LRRLQD---RLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHH-HHHHHh---hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence 58999997 999999999999999999999986543 222211 12488999999999999988 7889999888653
No 340
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.75 E-value=0.00014 Score=64.34 Aligned_cols=102 Identities=20% Similarity=0.123 Sum_probs=60.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhC-CCeEEEe-ecCCCcccccchhcCCCCceEEE-ecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQ-GSQIIIP-YRGNFYDVRDLRLCGDLGQVLFQ-PYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
|+|+|+||||++|+.+++.|.++ ++++..+ +++.. ..+.+... .+.+... ..++.+. +..+.++++|+||.|.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~s-agk~~~~~--~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~al 76 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRES-AGKPVSEV--HPHLRGLVDLNLEPI-DEEEIAEDADVVFLAL 76 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchh-cCCChHHh--CccccccCCceeecC-CHHHhhcCCCEEEECC
Confidence 58999999999999999999987 4787754 43321 11111100 0111111 1112211 1223335799999998
Q ss_pred ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
+.. ..+.++..+.++|+ ++|=.|+..-..
T Consensus 77 P~~--------------~s~~~~~~~~~~G~-~VIDlS~~fR~~ 105 (346)
T TIGR01850 77 PHG--------------VSAELAPELLAAGV-KVIDLSADFRLK 105 (346)
T ss_pred Cch--------------HHHHHHHHHHhCCC-EEEeCChhhhcC
Confidence 642 23356777766774 888888766543
No 341
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.75 E-value=0.00019 Score=61.83 Aligned_cols=109 Identities=18% Similarity=0.223 Sum_probs=74.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcCC-----CCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCGD-----LGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
+||.|+|| |+||+.++-.|+.++ .++.+++... +..+....... ...-..+.+| .+ .+.++++|+|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~-~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiV 73 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINE-EKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIV 73 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEccc-ccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEE
Confidence 58999999 999999999998876 4899998872 22222111100 0001112222 12 3456889999
Q ss_pred EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233 92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134 (303)
Q Consensus 92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 134 (303)
+-+||.. ....+.+..+.|....+.+.+...+.+.+-++.+-|
T Consensus 74 vitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 74 VITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence 9999863 334667899999999999999999988765555544
No 342
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.74 E-value=0.00013 Score=63.73 Aligned_cols=115 Identities=15% Similarity=0.070 Sum_probs=70.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
||||.|+|| |.+|+.++..+...|. +|++++++............+..........+....++ +.++++|+||.+++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~ 79 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG 79 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence 579999998 9999999999998875 89999986543211110000000000000111111123 34789999999998
Q ss_pred cCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233 97 REFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHISA 134 (303)
Q Consensus 97 ~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss 134 (303)
.... ....+....|....+.+++.+.+...+ .+|..|.
T Consensus 80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN 120 (307)
T PRK06223 80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN 120 (307)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 6432 233355567888888888888877654 4555543
No 343
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.71 E-value=0.00037 Score=60.73 Aligned_cols=107 Identities=17% Similarity=0.181 Sum_probs=73.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcC-----CCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCG-----DLGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
+||.|+|+ |.+|+.++..|+..| +++++++|+............ ......... .+.+ .++++|+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~----~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS----DCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH----HhCCCCEE
Confidence 48999996 999999999999999 689999997543221111000 001122221 2222 35789999
Q ss_pred EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233 92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS 133 (303)
Q Consensus 92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 133 (303)
|.++|.. ......+..+.|....+.+++.+++++.+ .++.+|
T Consensus 73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 9999974 22356678899999999999999998765 444444
No 344
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.62 E-value=0.0003 Score=62.02 Aligned_cols=90 Identities=12% Similarity=0.145 Sum_probs=56.3
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCCeEE---EeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGSQII---IPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~---~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
+|+|.||||++|+.+++.|.+++|++. .+.+... ....+.. .+......|+. . ..++++|+||.+++
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~-~g~~~~~----~~~~~~~~~~~-~----~~~~~~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRS-AGRKVTF----KGKELEVNEAK-I----ESFEGIDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecccc-CCCeeee----CCeeEEEEeCC-h----HHhcCCCEEEECCC
Confidence 589999999999999999999887654 3335422 2222221 22455555653 2 23478999999987
Q ss_pred cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233 97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134 (303)
Q Consensus 97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 134 (303)
... ++.++..+.+.|+ ++|=.|+
T Consensus 71 ~~~--------------s~~~a~~~~~~G~-~VID~ss 93 (339)
T TIGR01296 71 GSV--------------SKEFAPKAAKCGA-IVIDNTS 93 (339)
T ss_pred HHH--------------HHHHHHHHHHCCC-EEEECCH
Confidence 531 2245555555676 5554454
No 345
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.61 E-value=0.00061 Score=60.03 Aligned_cols=108 Identities=15% Similarity=0.174 Sum_probs=71.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcc--c----------------------ccchhcCCCCceEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYD--V----------------------RDLRLCGDLGQVLF 70 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~--~----------------------~~~~~~~~~~~~~~ 70 (303)
++.++|+|+|+ |-+|+++++.|...|. +++++++..-+. . +.+......-+++.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 45779999996 7899999999999995 788887754110 0 00111111123566
Q ss_pred EecCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 71 ~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
+..|++ .+.+.++++++|+||.+.... ..-..+-++|.+.++ .+|+.+..+.++
T Consensus 101 ~~~~~~-~~~~~~~~~~~DlVid~~D~~-------------~~r~~in~~~~~~~i-p~i~~~~~g~~G 154 (338)
T PRK12475 101 VVTDVT-VEELEELVKEVDLIIDATDNF-------------DTRLLINDLSQKYNI-PWIYGGCVGSYG 154 (338)
T ss_pred EeccCC-HHHHHHHhcCCCEEEEcCCCH-------------HHHHHHHHHHHHcCC-CEEEEEecccEE
Confidence 667764 556788889999999997321 111235677888886 678877666544
No 346
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.60 E-value=0.0002 Score=54.50 Aligned_cols=78 Identities=19% Similarity=0.203 Sum_probs=54.2
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCe-EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQ-IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
+.++++++|.|| |..|+.++.+|.+.|.+ |+++.|+..+..+..... ....++++.. +++.+.+.++|+||+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~-~~~~~~~~~~-----~~~~~~~~~~DivI~ 81 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF-GGVNIEAIPL-----EDLEEALQEADIVIN 81 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH-TGCSEEEEEG-----GGHCHHHHTESEEEE
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc-CccccceeeH-----HHHHHHHhhCCeEEE
Confidence 467899999997 99999999999999965 999999754433222222 1123444433 334467788999999
Q ss_pred ccccCc
Q psy4233 94 LIGREF 99 (303)
Q Consensus 94 ~a~~~~ 99 (303)
+.+...
T Consensus 82 aT~~~~ 87 (135)
T PF01488_consen 82 ATPSGM 87 (135)
T ss_dssp -SSTTS
T ss_pred ecCCCC
Confidence 988653
No 347
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.60 E-value=0.00048 Score=59.54 Aligned_cols=105 Identities=21% Similarity=0.209 Sum_probs=60.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
+|+||.|.||+|+.|..|++.|..+. .++...+.+............++.+..-......|.+.+ ..+++|+||.+.
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal 78 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLAL 78 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEec
Confidence 37899999999999999999999987 576666554322222111111111111111111233332 445699999886
Q ss_pred ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233 96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138 (303)
Q Consensus 96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~ 138 (303)
.-. ..+.++......++ ++|=+|+..-.
T Consensus 79 Phg--------------~s~~~v~~l~~~g~-~VIDLSadfR~ 106 (349)
T COG0002 79 PHG--------------VSAELVPELLEAGC-KVIDLSADFRL 106 (349)
T ss_pred Cch--------------hHHHHHHHHHhCCC-eEEECCccccc
Confidence 431 12245555666666 57777765443
No 348
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.59 E-value=0.00066 Score=59.87 Aligned_cols=108 Identities=14% Similarity=0.147 Sum_probs=71.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccc------------------------ccchhcCCCCceEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDV------------------------RDLRLCGDLGQVLF 70 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~------------------------~~~~~~~~~~~~~~ 70 (303)
+...+|+|+|+ |.+|++++..|...|. +++++++..-+.. +.++.....-+++.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 45679999997 9999999999999995 7888877531100 00110011123556
Q ss_pred EecCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 71 QPYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 71 ~~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
+..+++ .+.+.++++++|+||.+... ...-..+-++|.+.++ .+|+.++.+.++
T Consensus 101 ~~~~~~-~~~~~~~~~~~DlVid~~Dn-------------~~~r~~ln~~~~~~~i-P~i~~~~~g~~G 154 (339)
T PRK07688 101 IVQDVT-AEELEELVTGVDLIIDATDN-------------FETRFIVNDAAQKYGI-PWIYGACVGSYG 154 (339)
T ss_pred EeccCC-HHHHHHHHcCCCEEEEcCCC-------------HHHHHHHHHHHHHhCC-CEEEEeeeeeee
Confidence 666764 55677788999999998542 2222357778888886 788877666544
No 349
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.58 E-value=0.0011 Score=57.70 Aligned_cols=107 Identities=16% Similarity=0.163 Sum_probs=72.8
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc-chhc---C--CCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD-LRLC---G--DLGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~-~~~~---~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
||.|+|+ |.||+.++-.|+.++ .++.+++......... ..+. . ....+.+..+ | .+.++++|+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~----y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D----YDDCADADII 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C----HHHhCCCCEE
Confidence 6899998 999999999999888 4788888864322111 1111 0 0112333333 2 3457899999
Q ss_pred EEccccCc--ccc--chhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233 92 INLIGREF--ATK--NFTIADANVEIPARLARLSKEMGVEKFIHISA 134 (303)
Q Consensus 92 i~~a~~~~--~~~--~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 134 (303)
|-+||... ... +.+.+..|....+.+++.+.+++..-++.+-|
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs 119 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT 119 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 99999742 223 47888999999999999999988654444443
No 350
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.58 E-value=0.00025 Score=60.49 Aligned_cols=112 Identities=19% Similarity=0.119 Sum_probs=71.8
Q ss_pred EEEEcCCChhHHHHHHHHHhCC----CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
|.|+||+|.+|..++..|+..| .++.+++++............+..... ....+.-.+++.+.++++|+||.+++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchHHHhCCCCEEEECCC
Confidence 5799999999999999999988 789999886533211111000000000 01111212335567899999999998
Q ss_pred cCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233 97 REFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHIS 133 (303)
Q Consensus 97 ~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 133 (303)
.... .........|....+.+++.+++...+ .++..|
T Consensus 80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 6422 234457778899999999999988754 444443
No 351
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.56 E-value=0.00014 Score=63.48 Aligned_cols=35 Identities=11% Similarity=0.177 Sum_probs=31.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF 53 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 53 (303)
+|+|.|+| +|.+|..++..|+++|++|++++|++.
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~ 36 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA 36 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence 35899999 699999999999999999999999753
No 352
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.55 E-value=0.00068 Score=59.85 Aligned_cols=97 Identities=10% Similarity=0.147 Sum_probs=56.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCC---eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGS---QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
.++|+|.||||++|+.+++.|.+++| ++..+... .+..+.... .+.++...++ +.+ .++++|+||.+
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~-rsaGk~~~~----~~~~~~v~~~-~~~----~~~~~D~vf~a 76 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA-RSAGKKVTF----EGRDYTVEEL-TED----SFDGVDIALFS 76 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc-CCCCCeeee----cCceeEEEeC-CHH----HHcCCCEEEEC
Confidence 57999999999999999999998776 34433332 111111111 1122222233 222 34689999988
Q ss_pred cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
++.. .++.++..+.+.|+ ++|=.|+..-..
T Consensus 77 ~p~~--------------~s~~~~~~~~~~g~-~VIDlS~~fR~~ 106 (344)
T PLN02383 77 AGGS--------------ISKKFGPIAVDKGA-VVVDNSSAFRME 106 (344)
T ss_pred CCcH--------------HHHHHHHHHHhCCC-EEEECCchhhcC
Confidence 8642 12245555555665 677666655433
No 353
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=97.54 E-value=0.0015 Score=54.83 Aligned_cols=94 Identities=13% Similarity=0.093 Sum_probs=72.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL 94 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~ 94 (303)
+|++|+|.|||+ =|..|++.|.+.|++|++.+........ ...+.++.+-+.|.+.+.+.+++ +++||+.
T Consensus 1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~~-------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDA 72 (248)
T PRK08057 1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGPA-------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDA 72 (248)
T ss_pred CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCcc-------cCCceEEECCCCCHHHHHHHHHHCCCCEEEEC
Confidence 367999999987 5999999999999988887665433311 13477888888899999999874 9999999
Q ss_pred cccCccccchhhhhhhcchHHHHHHHHHhcCCceE
Q psy4233 95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKF 129 (303)
Q Consensus 95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 129 (303)
.-+.. ...++++.++|++.+++.+
T Consensus 73 THPfA-----------~~is~~a~~ac~~~~ipyi 96 (248)
T PRK08057 73 THPYA-----------AQISANAAAACRALGIPYL 96 (248)
T ss_pred CCccH-----------HHHHHHHHHHHHHhCCcEE
Confidence 76542 3346689999999998533
No 354
>KOG1494|consensus
Probab=97.53 E-value=0.00083 Score=56.03 Aligned_cols=115 Identities=22% Similarity=0.138 Sum_probs=73.8
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCc-ccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFY-DVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
+..+-||.|.||.|.|||.|...|..+. .+..+.+-.+.. -...+.-. +-......+.-++.++.+++++|+|
T Consensus 25 ~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI----~T~s~V~g~~g~~~L~~al~~advV 100 (345)
T KOG1494|consen 25 SQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHI----NTNSSVVGFTGADGLENALKGADVV 100 (345)
T ss_pred ccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccccc----CCCCceeccCChhHHHHHhcCCCEE
Confidence 3456799999999999999987776443 122222222111 11111000 0111122344567899999999999
Q ss_pred EEccccC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233 92 INLIGRE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS 133 (303)
Q Consensus 92 i~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 133 (303)
+--||.+ ..-.+.+.+++|....+.|..++.+...+ ++.++|
T Consensus 101 vIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs 145 (345)
T KOG1494|consen 101 VIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS 145 (345)
T ss_pred EecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence 9999973 22355679999999999999999887654 455555
No 355
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=97.53 E-value=0.00038 Score=60.52 Aligned_cols=113 Identities=13% Similarity=0.093 Sum_probs=70.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCccccc-chhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRD-LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
|||.|+|+ |++|..++..|+..|+ +|++++......... ..... ..-.+.....+.-..++.+ ++++|+||-++|
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~-~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag 78 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYE-ASPVGGFDTKVTGTNNYAD-TANSDIVVITAG 78 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhh-hhhccCCCcEEEecCCHHH-hCCCCEEEEcCC
Confidence 58999997 9999999999999886 899998854322111 11110 0000000111111112333 578999999999
Q ss_pred cCcc--ccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEec
Q psy4233 97 REFA--TKNFTIADANVEIPARLARLSKEMGVE-KFIHISA 134 (303)
Q Consensus 97 ~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss 134 (303)
.+.. ..+.+....|....+.+++.+.+++.. .+|.+|.
T Consensus 79 ~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 79 LPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 6432 344567788999999999988877643 5555553
No 356
>PLN02602 lactate dehydrogenase
Probab=97.53 E-value=0.00039 Score=61.44 Aligned_cols=108 Identities=13% Similarity=0.100 Sum_probs=72.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc-chhc---CCCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD-LRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVVI 92 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~-~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi 92 (303)
+||.|+|+ |.||+.++-.|+..+ .++.+++.+....... ..+. .-.+... +.++ .|. +.++++|+||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy----~~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDY----AVTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCH----HHhCCCCEEE
Confidence 69999996 999999999999887 4788888864322111 1110 0011122 2221 122 2378999999
Q ss_pred EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233 93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS 133 (303)
Q Consensus 93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 133 (303)
-+||... .....+....|....+.+++..++++.+ .++.+|
T Consensus 111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999742 2456678889999999999999988755 455444
No 357
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.53 E-value=0.00049 Score=60.27 Aligned_cols=111 Identities=15% Similarity=0.081 Sum_probs=73.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhc-CCC---Cce-EEEecCCCCHHHHHHHhcccCE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLC-GDL---GQV-LFQPYHPRNDDEIRKAIKYSNV 90 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~-~~~---~~~-~~~~~Dl~d~~~~~~~~~~~D~ 90 (303)
..+||.|+|| |.+|+.++..|...| .++.+++++..... ..... .+. .+. ..+.+ ..+++ .++++|+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~-g~~lDl~~~~~~~~~~~~i~~----~~d~~-~l~~ADi 76 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQ-GKALDLKHFSTLVGSNINILG----TNNYE-DIKDSDV 76 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccch-hHHHHHhhhccccCCCeEEEe----CCCHH-HhCCCCE
Confidence 4579999997 999999999999888 68888888654321 11110 000 000 11111 12334 6689999
Q ss_pred EEEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCce-EEEEec
Q psy4233 91 VINLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEK-FIHISA 134 (303)
Q Consensus 91 vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~Ss 134 (303)
||.++|... .....+....|....+.+++.+.+...+. ++++|.
T Consensus 77 VVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 77 VVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999997632 23455677888888889999998887654 666654
No 358
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.51 E-value=0.0012 Score=59.90 Aligned_cols=112 Identities=16% Similarity=0.079 Sum_probs=75.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhC-------CC--eEEEeecCCCccccc-chhc----CCCCceEEEecCCCCHHHH
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQ-------GS--QIIIPYRGNFYDVRD-LRLC----GDLGQVLFQPYHPRNDDEI 81 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~-------g~--~V~~~~R~~~~~~~~-~~~~----~~~~~~~~~~~Dl~d~~~~ 81 (303)
.++-||.|+||+|.||.+++-.|+.. +. +++.++++.+..... ..+. ....++.+ .. .|
T Consensus 98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~---- 170 (444)
T PLN00112 98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DP---- 170 (444)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CC----
Confidence 34569999999999999999999988 53 788888865432211 1110 00012211 11 12
Q ss_pred HHHhcccCEEEEccccCc--cccchhhhhhhcchHHHHHHHHHh-cCCc-eEEEEec
Q psy4233 82 RKAIKYSNVVINLIGREF--ATKNFTIADANVEIPARLARLSKE-MGVE-KFIHISA 134 (303)
Q Consensus 82 ~~~~~~~D~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~-~~~~-~~v~~Ss 134 (303)
.+.++++|+||.++|... .....+..+.|....+.+.+...+ ++.. ++|.+|.
T Consensus 171 ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 171 YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence 345789999999999742 346678999999999999999999 5644 5555553
No 359
>PRK04148 hypothetical protein; Provisional
Probab=97.49 E-value=0.00067 Score=50.90 Aligned_cols=92 Identities=14% Similarity=0.110 Sum_probs=67.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR 97 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~ 97 (303)
+++|+++|. | -|.+++..|.+.|++|++++.++.. .+..+. ..++.+.+|+.+++. +..+++|.|+.+=.+
T Consensus 17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~a-V~~a~~----~~~~~v~dDlf~p~~--~~y~~a~liysirpp 87 (134)
T PRK04148 17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKA-VEKAKK----LGLNAFVDDLFNPNL--EIYKNAKLIYSIRPP 87 (134)
T ss_pred CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHH-HHHHHH----hCCeEEECcCCCCCH--HHHhcCCEEEEeCCC
Confidence 478999995 7 8999999999999999999997652 222221 247899999998874 456789999877543
Q ss_pred CccccchhhhhhhcchHHHHHHHHHhcCCceEEE
Q psy4233 98 EFATKNFTIADANVEIPARLARLSKEMGVEKFIH 131 (303)
Q Consensus 98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~ 131 (303)
. +....+++.+++.++.-+|.
T Consensus 88 ~-------------el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 88 R-------------DLQPFILELAKKINVPLIIK 108 (134)
T ss_pred H-------------HHHHHHHHHHHHcCCCEEEE
Confidence 2 12236899999998854443
No 360
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.47 E-value=0.00046 Score=60.40 Aligned_cols=113 Identities=15% Similarity=0.062 Sum_probs=73.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccc-cchhc---C-CCCceEEEecCCCCHHHHHHHhcccC
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVR-DLRLC---G-DLGQVLFQPYHPRNDDEIRKAIKYSN 89 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~-~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~~D 89 (303)
+..+||.|+|| |.+|+.++..++..|. ++++++.++..... .+... . ......+. .. .| + +.++++|
T Consensus 4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~~-~d---~-~~l~~aD 76 (321)
T PTZ00082 4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-GT-NN---Y-EDIAGSD 76 (321)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-EC-CC---H-HHhCCCC
Confidence 45679999995 9999999999998884 88888887653211 11100 0 00112222 11 23 2 3568999
Q ss_pred EEEEccccCcc--c-----cchhhhhhhcchHHHHHHHHHhcCCc-eEEEEecC
Q psy4233 90 VVINLIGREFA--T-----KNFTIADANVEIPARLARLSKEMGVE-KFIHISAL 135 (303)
Q Consensus 90 ~vi~~a~~~~~--~-----~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~ 135 (303)
+||.+++.... . ...+....|....+.+++.+.+...+ .++..|..
T Consensus 77 iVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP 130 (321)
T PTZ00082 77 VVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNP 130 (321)
T ss_pred EEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 99999986421 1 33456677888888999999888765 56666643
No 361
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.42 E-value=0.0027 Score=55.42 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=71.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccc-cchhcC---CCCceEEEecCCCCHHHHHHHhcccCEEE
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVR-DLRLCG---DLGQVLFQPYHPRNDDEIRKAIKYSNVVI 92 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~-~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi 92 (303)
|||.|+|+ |.+|..++..|+.+| .+|.+++++...... ...+.. -.+...+.. .|. +.++++|+||
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~----~~l~~aDiVi 72 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY----ADCKGADVVV 72 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH----HHhCCCCEEE
Confidence 58999998 999999999999999 689999987543211 111110 001122221 222 3478999999
Q ss_pred EccccCc--cccchhhhhhhcchHHHHHHHHHhcCCceEEEEe
Q psy4233 93 NLIGREF--ATKNFTIADANVEIPARLARLSKEMGVEKFIHIS 133 (303)
Q Consensus 93 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 133 (303)
.+++... .....+....|....+.+++.+++.+.+-++.+-
T Consensus 73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~ 115 (308)
T cd05292 73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV 115 (308)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 9999742 2345567788999999999998887754334333
No 362
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.42 E-value=0.00044 Score=60.28 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=72.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc-chhc---CCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD-LRLC---GDLGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~-~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
.+||.|+|+ |.||+.++-.|+..| .++.+++.+....... ..+. .-.....+... .|.+ .++++|+|
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~----~~~~adiv 75 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS----VTANSKVV 75 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH----HhCCCCEE
Confidence 359999996 999999999999887 5788888765322111 1110 00011122221 1333 36899999
Q ss_pred EEccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233 92 INLIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS 133 (303)
Q Consensus 92 i~~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 133 (303)
|.++|... .....+..+.|....+.+++.+++++.+ .++.+|
T Consensus 76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 99999632 2456678899999999999999998755 444444
No 363
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.42 E-value=0.0024 Score=51.92 Aligned_cols=109 Identities=15% Similarity=0.167 Sum_probs=69.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcc--ccc----------------------chhcCCCCceEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYD--VRD----------------------LRLCGDLGQVLF 70 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~--~~~----------------------~~~~~~~~~~~~ 70 (303)
.+..+|+|.|+.| +|+++++.|...| .++++++...-+. ... ++.....-+++.
T Consensus 17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~ 95 (198)
T cd01485 17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI 95 (198)
T ss_pred HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence 3467999999866 9999999999999 5687776542211 110 000011122444
Q ss_pred EecCCCC-HHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 71 QPYHPRN-DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 71 ~~~Dl~d-~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
+..++.+ .+...+.++++|+||.+... ......+-+.|++.++ ++|+.++.+.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d~-------------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G 151 (198)
T cd01485 96 VEEDSLSNDSNIEEYLQKFTLVIATEEN-------------YERTAKVNDVCRKHHI-PFISCATYGLIG 151 (198)
T ss_pred EecccccchhhHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 5555532 44556678889999977432 1122346788888887 888888777665
No 364
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=97.41 E-value=0.00084 Score=58.17 Aligned_cols=206 Identities=11% Similarity=0.038 Sum_probs=104.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
++++|.|.||||++|+.+++.|.++. .++..+.++..+ ++.+ ....++++|+||.+.
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~-------------------~~~~---~~~~~~~~DvvFlal 58 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK-------------------DAAA---RRELLNAADVAILCL 58 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC-------------------cccC---chhhhcCCCEEEECC
Confidence 36799999999999999999999987 466666554321 1111 123456799999887
Q ss_pred ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC------CCC-----------CCCCCCCchhHHHHH
Q psy4233 96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN------PPT-----------YYISGGSQFYRTKYQ 158 (303)
Q Consensus 96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~-----------~~~~~~~~y~~~K~~ 158 (303)
... ....++..+.+.|+ ++|=.|+..-..+ +|- ....-.+.|..+-..
T Consensus 59 p~~--------------~s~~~~~~~~~~g~-~VIDlSadfRl~~~~~yglPEvn~~~~~~i~~~~~IanPgC~~Ta~~l 123 (313)
T PRK11863 59 PDD--------------AAREAVALIDNPAT-RVIDASTAHRTAPGWVYGFPELAPGQRERIAAAKRVANPGCYPTGAIA 123 (313)
T ss_pred CHH--------------HHHHHHHHHHhCCC-EEEECChhhhcCCCCeEEcCccCHHHHHHhhcCCeEEcCCcHHHHHHH
Confidence 431 12245555555665 6776666543321 111 000112445554444
Q ss_pred HHHHHHhhC-C-C---EEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHhc-----
Q psy4233 159 GEKEVLREF-P-E---ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAACK----- 228 (303)
Q Consensus 159 ~e~~~~~~~-~-~---~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~----- 228 (303)
+-.=+.+.+ + + .++--.+.+-|.+......+..........+..|+.+.. .-|...+.+.+-....
T Consensus 124 aL~PL~~~~li~~~~~i~i~a~SG~SGAG~~~~~~~~~~~~~~~~n~~~Y~~~~~----HrH~pEi~~~l~~~~~~~F~P 199 (313)
T PRK11863 124 LLRPLVDAGLLPADYPVSINAVSGYSGGGKAMIAAYEAAPDGKAPAFRLYGLGLA----HKHLPEMQAHAGLARRPIFTP 199 (313)
T ss_pred HHHHHHHcCCcccCceEEEEEccccccCCccchHHHhhhhhhhccCeeeccCCcC----CcchHHHHHHhccccCcEEEe
Confidence 444333333 2 1 222222333444433222221001112334444544411 2355555555422211
Q ss_pred --CCCCCCc--EEEEeC---CcccCHHHHHHHHHHHhcCCCC
Q psy4233 229 --DPDAAGK--IYQAVG---PKRYLLSELLDWFHVVMKKGEP 263 (303)
Q Consensus 229 --~~~~~g~--~~~i~~---~~~~s~~e~~~~i~~~~g~~~~ 263 (303)
.+-..|- +.++.- .+.++..|+.+.+.+.++.+.-
T Consensus 200 hl~p~~rGil~Ti~~~~~~~~~~~~~~~i~~~~~~~Y~~epf 241 (313)
T PRK11863 200 SVGNFRQGMLVTVPLHLRLLPGGPTAEDLHAALADHYAGEAF 241 (313)
T ss_pred eEccccCcEEEEEEEEecccCCCCCHHHHHHHHHHHcCCCCe
Confidence 0112221 233332 5668999999999998875543
No 365
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.37 E-value=0.0015 Score=57.82 Aligned_cols=86 Identities=13% Similarity=0.079 Sum_probs=51.2
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhC-CCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQ-GSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
|++|.|+||||++|+.+++.|+++ .++ +..++.+. +....... . +-.....++.|.+. ++++|++|.
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~-sg~~~~~f-~---g~~~~v~~~~~~~~----~~~~Divf~ 71 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQ-AGGAAPSF-G---GKEGTLQDAFDIDA----LKKLDIIIT 71 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchh-hCCccccc-C---CCcceEEecCChhH----hcCCCEEEE
Confidence 479999999999999999966665 455 66654432 11111111 1 11122233344443 467999999
Q ss_pred ccccCccccchhhhhhhcchHHHHHHHHHhcCC
Q psy4233 94 LIGREFATKNFTIADANVEIPARLARLSKEMGV 126 (303)
Q Consensus 94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 126 (303)
+++.. .++.+...+.++|.
T Consensus 72 a~~~~--------------~s~~~~~~~~~aG~ 90 (369)
T PRK06598 72 CQGGD--------------YTNEVYPKLRAAGW 90 (369)
T ss_pred CCCHH--------------HHHHHHHHHHhCCC
Confidence 98642 13356666666775
No 366
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.36 E-value=0.00035 Score=63.33 Aligned_cols=111 Identities=17% Similarity=0.055 Sum_probs=72.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhC---C----CeEEEeecC-CCcccccchhc------CCCCceEEEecCCCCHHHHH
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQ---G----SQIIIPYRG-NFYDVRDLRLC------GDLGQVLFQPYHPRNDDEIR 82 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~---g----~~V~~~~R~-~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~ 82 (303)
++-+|+||||+|.||++|+-.+.+= | ..+.+++.. ..+........ .....+.+. .| ..
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~------~~ 194 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD------LD 194 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC------CH
Confidence 4568999999999999999998862 2 234555553 12221111100 001122222 11 23
Q ss_pred HHhcccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcCC--ceEEEEec
Q psy4233 83 KAIKYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMGV--EKFIHISA 134 (303)
Q Consensus 83 ~~~~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~~Ss 134 (303)
+.++++|+||-++|.. ......+..+.|....+.+.++..+... .+++.+.|
T Consensus 195 ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 195 VAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 5688999999999974 2345678899999999999999988776 57777765
No 367
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.35 E-value=0.0043 Score=47.09 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=68.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccch--h--------------------cCCCCceEEEecC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLR--L--------------------CGDLGQVLFQPYH 74 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~--~--------------------~~~~~~~~~~~~D 74 (303)
.++|+|.|+ |-+|+.+++.|...|. ++++++...-+....-+ . ....-+++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 368999996 9999999999999995 67777654322111100 0 0001235566666
Q ss_pred CCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 75 PRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 75 l~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
+ +.+...+.++++|+||.+... ...-..+-+.|++.+. ++|..++.+.++
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~-------------~~~~~~l~~~~~~~~~-p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDS-------------LAARLLLNEICREYGI-PFIDAGVNGFYG 130 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSS-------------HHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred c-ccccccccccCCCEEEEecCC-------------HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 6 566778888899999998643 1222357778888887 788777665443
No 368
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.34 E-value=0.0015 Score=60.32 Aligned_cols=102 Identities=22% Similarity=0.291 Sum_probs=71.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHH-HhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRK-AIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~D~vi~~ 94 (303)
..+++|+|+|+ |.+|+.+++.|.+.|++|+++++++.. .+.+... ..++.++.+|.++.+.+.+ .++++|+||-+
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~-~~~~~~~--~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPER-AEELAEE--LPNTLVLHGDGTDQELLEEEGIDEADAFIAL 304 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH-HHHHHHH--CCCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence 44789999997 999999999999999999999887542 2222211 1357889999999998865 45669999866
Q ss_pred cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233 95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134 (303)
Q Consensus 95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 134 (303)
.... +.|. .+...+++.+..+++....
T Consensus 305 ~~~~---------~~n~----~~~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 305 TNDD---------EANI----LSSLLAKRLGAKKVIALVN 331 (453)
T ss_pred CCCc---------HHHH----HHHHHHHHhCCCeEEEEEC
Confidence 5421 1233 2344556667666665544
No 369
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.32 E-value=0.00048 Score=55.45 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=47.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR 97 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~ 97 (303)
||++.|.| +|.||+.+++.|.+.||+|+.-+|+.++..+....... +. -...+..++.+.+|+||-....
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~-~~--------i~~~~~~dA~~~aDVVvLAVP~ 70 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG-PL--------ITGGSNEDAAALADVVVLAVPF 70 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc-cc--------cccCChHHHHhcCCEEEEeccH
Confidence 45666666 79999999999999999999997776654443322111 11 1223344566789999887643
No 370
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=97.31 E-value=0.0025 Score=56.42 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=57.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchh-c-----CCCCc-eEEEec-CCCCHHHHHHHhcccC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRL-C-----GDLGQ-VLFQPY-HPRNDDEIRKAIKYSN 89 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~-~-----~~~~~-~~~~~~-Dl~d~~~~~~~~~~~D 89 (303)
++|+|+||||++|+++++.|.+++ .++..+.++..+....... . ..... ..-+.. ++ +++ .+.++|
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D 75 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD 75 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence 589999999999999999998876 6888775443322111110 0 00000 110011 11 222 346799
Q ss_pred EEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 90 VVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 90 ~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
+|+.+++.. ....+...+.+.|+ ++|..|+..-..
T Consensus 76 vVf~a~p~~--------------~s~~~~~~~~~~G~-~VIDlsg~fR~~ 110 (341)
T TIGR00978 76 IVFSALPSE--------------VAEEVEPKLAEAGK-PVFSNASNHRMD 110 (341)
T ss_pred EEEEeCCHH--------------HHHHHHHHHHHCCC-EEEECChhhccC
Confidence 999887542 11234566666777 667677665443
No 371
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.29 E-value=0.0029 Score=52.68 Aligned_cols=108 Identities=13% Similarity=0.069 Sum_probs=67.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccch--------------------hcCCCC--ceEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLR--------------------LCGDLG--QVLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~--------------------~~~~~~--~~~~~~ 72 (303)
+...+|+|.|+ |-+|+++++.|...|. ++++++...-+....-+ +...-+ +++.+.
T Consensus 19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 45679999995 9999999999999994 66665443211110000 000012 345555
Q ss_pred cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
.++ +.+.+.+.++++|+||.+.... ..-..+-+.|.+.++ .+|+.+..+.++
T Consensus 98 ~~i-~~~~~~~~~~~~DvVi~~~d~~-------------~~r~~l~~~~~~~~i-p~i~~g~~g~~g 149 (228)
T cd00757 98 ERL-DAENAEELIAGYDLVLDCTDNF-------------ATRYLINDACVKLGK-PLVSGAVLGFEG 149 (228)
T ss_pred cee-CHHHHHHHHhCCCEEEEcCCCH-------------HHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 555 4566778889999999987532 112246778888886 788776655433
No 372
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.28 E-value=0.0012 Score=52.02 Aligned_cols=58 Identities=19% Similarity=0.332 Sum_probs=48.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
+..+++|+|+|+.+.+|..+++.|.++|.+|++..|+. +++.+.+.++|+||.+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------hhHHHHHhhCCEEEEc
Confidence 35688999999977789999999999999998888752 3456788889999999
Q ss_pred cccC
Q psy4233 95 IGRE 98 (303)
Q Consensus 95 a~~~ 98 (303)
.+..
T Consensus 95 t~~~ 98 (168)
T cd01080 95 VGKP 98 (168)
T ss_pred CCCC
Confidence 8864
No 373
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.25 E-value=0.0026 Score=51.90 Aligned_cols=108 Identities=15% Similarity=0.096 Sum_probs=69.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccc--------------------hhcCCCCc--eEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDL--------------------RLCGDLGQ--VLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~--------------------~~~~~~~~--~~~~~ 72 (303)
+...+|+|.|+ |-+|+++++.|...|. +++++++..-+....- .+....+. ++.+.
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 35679999995 9999999999999994 7888877532110000 00011122 33444
Q ss_pred cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
..+ +.+.+.+.++++|+||.+.... ..-..+-+.|++.++ .+|+.++.+.++
T Consensus 98 ~~i-~~~~~~~~~~~~D~Vi~~~d~~-------------~~r~~l~~~~~~~~i-p~i~~~~~g~~G 149 (202)
T TIGR02356 98 ERV-TAENLELLINNVDLVLDCTDNF-------------ATRYLINDACVALGT-PLISAAVVGFGG 149 (202)
T ss_pred hcC-CHHHHHHHHhCCCEEEECCCCH-------------HHHHHHHHHHHHcCC-CEEEEEeccCeE
Confidence 444 3456778889999999986421 122246778888886 788877665554
No 374
>KOG0023|consensus
Probab=97.23 E-value=0.0016 Score=55.64 Aligned_cols=103 Identities=12% Similarity=0.106 Sum_probs=74.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
.++.+.|+|+.| +|.--++...+-|++|++++++..+..+..+.. +.+.+..-..|++.+.++.+-.|.++|++.
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L----GAd~fv~~~~d~d~~~~~~~~~dg~~~~v~ 255 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL----GADVFVDSTEDPDIMKAIMKTTDGGIDTVS 255 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc----CcceeEEecCCHHHHHHHHHhhcCcceeee
Confidence 377999999988 999999999999999999999876666655543 355555555588888888877888888876
Q ss_pred cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233 97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137 (303)
Q Consensus 97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 137 (303)
..... ....+++.++..| ++|+++-...
T Consensus 256 ~~a~~-----------~~~~~~~~lk~~G--t~V~vg~p~~ 283 (360)
T KOG0023|consen 256 NLAEH-----------ALEPLLGLLKVNG--TLVLVGLPEK 283 (360)
T ss_pred ecccc-----------chHHHHHHhhcCC--EEEEEeCcCC
Confidence 43111 1224667777665 7898885443
No 375
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.23 E-value=0.0022 Score=59.00 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=50.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc-ccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK-YSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~~ 94 (303)
+.+++|+|||++| +|..+++.|++.|++|++.++............. ..++++..++ ++..+ +. ++|.||..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~-~~g~~~~~~~--~~~~~---~~~~~d~vV~s 75 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL-EEGIKVICGS--HPLEL---LDEDFDLMVKN 75 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH-hcCCEEEeCC--CCHHH---hcCcCCEEEEC
Confidence 4578999999977 9999999999999999998875432221111111 1235555443 22221 33 39999999
Q ss_pred cccCc
Q psy4233 95 IGREF 99 (303)
Q Consensus 95 a~~~~ 99 (303)
+|...
T Consensus 76 ~gi~~ 80 (447)
T PRK02472 76 PGIPY 80 (447)
T ss_pred CCCCC
Confidence 98753
No 376
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=97.22 E-value=0.0035 Score=55.98 Aligned_cols=111 Identities=14% Similarity=0.093 Sum_probs=71.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-C----eEEE--e--ecCCCcccccchh--c----CCCCceEEEecCCCCHHH
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-S----QIII--P--YRGNFYDVRDLRL--C----GDLGQVLFQPYHPRNDDE 80 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~----~V~~--~--~R~~~~~~~~~~~--~----~~~~~~~~~~~Dl~d~~~ 80 (303)
.++-||.|+||+|.+|++++-.|+..+ . ++.+ + +++.+. ...... . ....++.+ .. .+
T Consensus 42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~-a~g~a~DL~d~a~~~~~~v~i-~~--~~--- 114 (387)
T TIGR01757 42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEA-LEGVAMELEDSLYPLLREVSI-GI--DP--- 114 (387)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchh-hhHHHHHHHHhhhhhcCceEE-ec--CC---
Confidence 346799999999999999999999887 2 2333 2 444322 111111 0 00112211 11 12
Q ss_pred HHHHhcccCEEEEccccC--ccccchhhhhhhcchHHHHHHHHHhcC-Cc-eEEEEec
Q psy4233 81 IRKAIKYSNVVINLIGRE--FATKNFTIADANVEIPARLARLSKEMG-VE-KFIHISA 134 (303)
Q Consensus 81 ~~~~~~~~D~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~Ss 134 (303)
.+.++++|+||.+||.. ....+.+..+.|....+.+...+.++. .. ++|.+|.
T Consensus 115 -y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 115 -YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred -HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 34578999999999974 234667889999999999999999843 33 5555553
No 377
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=97.21 E-value=0.0019 Score=58.02 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=54.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
|++|+|.|+ |.+|..++.++.+.|++|++++.++....... --+.+.+|..|.+.+.++.+.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-------ad~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-------ADEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-------CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 578999997 89999999999999999999988654422221 134566889999999999999998753
No 378
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.21 E-value=0.0016 Score=57.27 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=57.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHh-CCCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGK-QGSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~-~g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
...++|.|+||||++|+.+++.|.+ ..++ +..++... +.-+.+...+ ..+.+... |++. ++++|++
T Consensus 3 ~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~-saGk~~~~~~--~~l~v~~~---~~~~----~~~~Div 72 (347)
T PRK06728 3 EKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKR-SAGKTVQFKG--REIIIQEA---KINS----FEGVDIA 72 (347)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcc-cCCCCeeeCC--cceEEEeC---CHHH----hcCCCEE
Confidence 3457999999999999999999995 4566 55554432 2222221111 12333323 3333 4679999
Q ss_pred EEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233 92 INLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138 (303)
Q Consensus 92 i~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~ 138 (303)
|.+++.. .++.+...+.++|. ++|=.|+..-.
T Consensus 73 f~a~~~~--------------~s~~~~~~~~~~G~-~VID~Ss~fR~ 104 (347)
T PRK06728 73 FFSAGGE--------------VSRQFVNQAVSSGA-IVIDNTSEYRM 104 (347)
T ss_pred EECCChH--------------HHHHHHHHHHHCCC-EEEECchhhcC
Confidence 9988642 12345666666665 56655555443
No 379
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.20 E-value=0.0011 Score=55.10 Aligned_cols=72 Identities=8% Similarity=0.179 Sum_probs=48.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHh-------ccc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAI-------KYS 88 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~ 88 (303)
+.+-+++=-.++|.||.+++++|+++|++|+++++... ... .....+|+.+.++..+.+ .++
T Consensus 13 iD~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--l~~---------~~~~~~Dv~d~~s~~~l~~~v~~~~g~i 81 (227)
T TIGR02114 13 IDSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--LKP---------EPHPNLSIREIETTKDLLITLKELVQEH 81 (227)
T ss_pred CCCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--ccc---------ccCCcceeecHHHHHHHHHHHHHHcCCC
Confidence 33334433356999999999999999999999876321 000 001346788776666443 358
Q ss_pred CEEEEccccC
Q psy4233 89 NVVINLIGRE 98 (303)
Q Consensus 89 D~vi~~a~~~ 98 (303)
|++||+||..
T Consensus 82 DiLVnnAgv~ 91 (227)
T TIGR02114 82 DILIHSMAVS 91 (227)
T ss_pred CEEEECCEec
Confidence 9999999964
No 380
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.20 E-value=0.003 Score=51.55 Aligned_cols=89 Identities=21% Similarity=0.236 Sum_probs=62.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
+++++|+|+|| |.+|..-++.|++.|.+|++++....+....+. ...+++++..++.. + .+.++|.||-+.
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~---~~~~i~~~~~~~~~-~----dl~~~~lVi~at 77 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA---EQGGITWLARCFDA-D----ILEGAFLVIAAT 77 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH---HcCCEEEEeCCCCH-H----HhCCcEEEEECC
Confidence 46789999997 999999999999999999998775443322222 22468999988752 2 256788887665
Q ss_pred ccCccccchhhhhhhcchHHHHHHHHHhcCC
Q psy4233 96 GREFATKNFTIADANVEIPARLARLSKEMGV 126 (303)
Q Consensus 96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 126 (303)
+.. +.| ..+.+.|++.++
T Consensus 78 ~d~---------~ln----~~i~~~a~~~~i 95 (205)
T TIGR01470 78 DDE---------ELN----RRVAHAARARGV 95 (205)
T ss_pred CCH---------HHH----HHHHHHHHHcCC
Confidence 432 111 257888887664
No 381
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.20 E-value=0.0028 Score=54.83 Aligned_cols=103 Identities=16% Similarity=0.194 Sum_probs=58.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCC--e-EEEeecCCCccccc-chhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGS--Q-IIIPYRGNFYDVRD-LRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~--~-V~~~~R~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
+++|.|.||||.+|+.+++.|.++.. + +.++... ++.-.. ....++ ...+.-+..|.. .++++|+++.
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~-rSaG~~~~~f~~~---~~~v~~~~~~~~----~~~~~Divf~ 72 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASA-RSAGKKYIEFGGK---SIGVPEDAADEF----VFSDVDIVFF 72 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecc-cccCCccccccCc---cccCcccccccc----ccccCCEEEE
Confidence 47999999999999999999999652 3 3333322 221111 111000 001111112222 2348999999
Q ss_pred ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCCC
Q psy4233 94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTYY 145 (303)
Q Consensus 94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~ 145 (303)
++|... ++.+...+.++| ++.++..+.+--.++.|
T Consensus 73 ~ag~~~--------------s~~~~p~~~~~G---~~VIdnsSa~Rm~~DVP 107 (334)
T COG0136 73 AAGGSV--------------SKEVEPKAAEAG---CVVIDNSSAFRMDPDVP 107 (334)
T ss_pred eCchHH--------------HHHHHHHHHHcC---CEEEeCCcccccCCCCC
Confidence 998532 235677777777 45556666665544444
No 382
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.19 E-value=0.00069 Score=52.64 Aligned_cols=76 Identities=17% Similarity=0.131 Sum_probs=50.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
.++++|+|+|+ |.+|..+++.|.+.| ++|++.+|+.....+...... ...+..+..+. .+.++++|+||.+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG----ELGIAIAYLDL---EELLAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh----hcccceeecch---hhccccCCEEEeC
Confidence 45689999997 999999999999986 789999887543222111111 11112223333 3346889999999
Q ss_pred cccCc
Q psy4233 95 IGREF 99 (303)
Q Consensus 95 a~~~~ 99 (303)
.+...
T Consensus 89 ~~~~~ 93 (155)
T cd01065 89 TPVGM 93 (155)
T ss_pred cCCCC
Confidence 87643
No 383
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.19 E-value=0.0014 Score=59.59 Aligned_cols=37 Identities=19% Similarity=0.221 Sum_probs=32.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF 53 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 53 (303)
|.+|+|.|+| .|++|..++..|.+.|++|+++++++.
T Consensus 1 m~~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~ 37 (415)
T PRK11064 1 MSFETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQH 37 (415)
T ss_pred CCccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHH
Confidence 3468999998 599999999999999999999998754
No 384
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.15 E-value=0.0012 Score=59.09 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=32.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRG 51 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~ 51 (303)
.+++|.|+||+|.+|..+++.|.+.|++|++.+|+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 46799999999999999999999999999999985
No 385
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.15 E-value=0.0093 Score=45.68 Aligned_cols=104 Identities=20% Similarity=0.207 Sum_probs=64.8
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccc------------------h--hcCCCCc--eEEEecCCC
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDL------------------R--LCGDLGQ--VLFQPYHPR 76 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~------------------~--~~~~~~~--~~~~~~Dl~ 76 (303)
+|+|.|+ |-+|+++++.|...|. ++++++...-+..... . .....+. ++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899996 9999999999999995 6777765421111000 0 0000122 444555543
Q ss_pred CHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 77 d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
+. .....++++|+||.+... ......+.+.|++.++ .++..++.+..+
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~-------------~~~~~~l~~~~~~~~i-~~i~~~~~g~~g 127 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDN-------------IAVRRALNRACKELGI-PVIDAGGLGLGG 127 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEcCCCcEE
Confidence 33 336677889999998753 1223357888998886 777777665433
No 386
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=97.14 E-value=0.00028 Score=56.62 Aligned_cols=78 Identities=27% Similarity=0.314 Sum_probs=41.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCC----Cce-EE----E-ecCCCCHHHHHHHhccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL----GQV-LF----Q-PYHPRNDDEIRKAIKYS 88 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~----~~~-~~----~-~~Dl~d~~~~~~~~~~~ 88 (303)
|||.|.| .||+|..++..|.+.||+|++++.++. ..+.+.. +.. ++. ++ + .+.+.-..++...++++
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~-~v~~l~~-g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~a 77 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEE-KVEALNN-GELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDA 77 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH-HHHHHHT-TSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChH-HHHHHhh-ccccccccchhhhhccccccccchhhhhhhhhhhcc
Confidence 7999998 699999999999999999999988643 2221110 000 000 00 0 11222223344556678
Q ss_pred CEEEEccccCc
Q psy4233 89 NVVINLIGREF 99 (303)
Q Consensus 89 D~vi~~a~~~~ 99 (303)
|++|-|.+.+.
T Consensus 78 dv~~I~VpTP~ 88 (185)
T PF03721_consen 78 DVVFICVPTPS 88 (185)
T ss_dssp SEEEE----EB
T ss_pred ceEEEecCCCc
Confidence 99999988643
No 387
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.12 E-value=0.0018 Score=47.59 Aligned_cols=70 Identities=20% Similarity=0.303 Sum_probs=53.5
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG 96 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~ 96 (303)
|+|+|. |-+|..+++.|.+.+.+|+++.+++.. .+.+.. .++.++.+|.+|++.+.++ +.+++.|+-+..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~-~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPER-VEELRE----EGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHH-HHHHHH----TTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHH-HHHHHh----cccccccccchhhhHHhhcCccccCEEEEccC
Confidence 578886 899999999999977799999987533 233222 3488999999999999974 566998888765
No 388
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=97.10 E-value=0.0029 Score=54.61 Aligned_cols=81 Identities=12% Similarity=0.104 Sum_probs=53.2
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
||.|.|||||.|..+++.|..+. .++..++.+.. .+..+ ..++++++|++|.+++..
T Consensus 3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~-------------------~~~~~---~~~~~~~~D~vFlalp~~ 60 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR-------------------KDAAE---RAKLLNAADVAILCLPDD 60 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc-------------------cCcCC---HhHhhcCCCEEEECCCHH
Confidence 79999999999999999999986 56666644321 00112 334557899999887532
Q ss_pred ccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233 99 FATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137 (303)
Q Consensus 99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 137 (303)
.+..++..+.+.|+ ++|=.|+..-
T Consensus 61 --------------~s~~~~~~~~~~g~-~VIDlSadfR 84 (310)
T TIGR01851 61 --------------AAREAVSLVDNPNT-CIIDASTAYR 84 (310)
T ss_pred --------------HHHHHHHHHHhCCC-EEEECChHHh
Confidence 12245555555665 6776666543
No 389
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.08 E-value=0.0024 Score=55.48 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=70.8
Q ss_pred EEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchh-----cCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRL-----CGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
|.|+|+ |.+|+.++-.|+..| .++++++++.... ..... ........+... .| .+.++++|+||.
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~-~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIi 72 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKA-KGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVI 72 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHH-HHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEE
Confidence 468896 899999999999988 7899999865422 11110 000011222221 12 246789999999
Q ss_pred ccccCc--cccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233 94 LIGREF--ATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS 133 (303)
Q Consensus 94 ~a~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 133 (303)
++|... .....+....|....+.+++.+++++.+ .++.+|
T Consensus 73 tag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 73 TAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 999743 2456678888999999999999988754 444444
No 390
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.08 E-value=0.00093 Score=57.61 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=33.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY 54 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 54 (303)
.+.+|.|+|+ |.+|..++..|+..|++|++.++++..
T Consensus 4 ~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~ 40 (286)
T PRK07819 4 AIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEEL 40 (286)
T ss_pred CccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 3458999997 999999999999999999999998654
No 391
>KOG4022|consensus
Probab=97.06 E-value=0.057 Score=41.65 Aligned_cols=193 Identities=8% Similarity=0.040 Sum_probs=102.5
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCC--C-H----HHHHHHhcc--
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPR--N-D----DEIRKAIKY-- 87 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~----~~~~~~~~~-- 87 (303)
+..+|+|-|+-|-+|++++..+.+++|-|.-++-...+..+. -.++.+|-+ . . +.+.+.+.+
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad~---------sI~V~~~~swtEQe~~v~~~vg~sL~gek 72 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQADS---------SILVDGNKSWTEQEQSVLEQVGSSLQGEK 72 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccccc---------eEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence 346899999999999999999999999888887765433221 112233221 1 1 222233333
Q ss_pred cCEEEEccccCccccch---------hhhhhhcchHHHHHHHHHh--cCCceEEEEecCccCCCCCCCCCCCCCchhHHH
Q psy4233 88 SNVVINLIGREFATKNF---------TIADANVEIPARLARLSKE--MGVEKFIHISALNADPNPPTYYISGGSQFYRTK 156 (303)
Q Consensus 88 ~D~vi~~a~~~~~~~~~---------~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K 156 (303)
.|.||+.||.+...+.. .+.+..+. +..+...+.. .+..-++.+......- +.. ...-.|+..|
T Consensus 73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvw-tSaIsa~lAt~HLK~GGLL~LtGAkaAl--~gT--PgMIGYGMAK 147 (236)
T KOG4022|consen 73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVW-TSAISAKLATTHLKPGGLLQLTGAKAAL--GGT--PGMIGYGMAK 147 (236)
T ss_pred cceEEEeeccccCCCcchhhhhhchhhHHHHHHH-HHHHHHHHHHhccCCCceeeeccccccc--CCC--CcccchhHHH
Confidence 89999999875443322 11111111 1112211111 1222344444333221 111 3456899999
Q ss_pred HHHHHHHHhh-----CCC----EEEEeecceeeCCCchhhHHHHHHHhhhcceeeecCCCceeeCceeHHHHHHHHHHHh
Q psy4233 157 YQGEKEVLRE-----FPE----ATIFRPSDMYGSGDKFLRYYGHMWRHVFRKLAVYKKGEETIKQPVYVGDVAAAIVAAC 227 (303)
Q Consensus 157 ~~~e~~~~~~-----~~~----~~ilrp~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~ 227 (303)
.++.++.+.. |+| .+.+-|-.+-.|..+ +-.| + .+. -+|+....+++.++.-.
T Consensus 148 aAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNR-------------KwMP---~-ADf-ssWTPL~fi~e~flkWt 209 (236)
T KOG4022|consen 148 AAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNR-------------KWMP---N-ADF-SSWTPLSFISEHFLKWT 209 (236)
T ss_pred HHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccc-------------ccCC---C-Ccc-cCcccHHHHHHHHHHHh
Confidence 9999988774 333 222333222223221 1111 1 112 46788888998888766
Q ss_pred cC--CCCCCcEEEEeC
Q psy4233 228 KD--PDAAGKIYQAVG 241 (303)
Q Consensus 228 ~~--~~~~g~~~~i~~ 241 (303)
.. ++..|....+..
T Consensus 210 t~~~RPssGsLlqi~T 225 (236)
T KOG4022|consen 210 TETSRPSSGSLLQITT 225 (236)
T ss_pred ccCCCCCCCceEEEEe
Confidence 43 333455555543
No 392
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=97.06 E-value=0.0048 Score=51.40 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=29.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC-CeEE-EeecCC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG-SQII-IPYRGN 52 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~-~~~R~~ 52 (303)
+||||.|.||+|-+|+.+++.+.+.+ .++. ++.|..
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~ 38 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG 38 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence 36899999999999999999999876 5544 456654
No 393
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=97.05 E-value=0.048 Score=50.21 Aligned_cols=92 Identities=17% Similarity=0.172 Sum_probs=61.1
Q ss_pred CCCcEEEEEcCC---ChhHHHHHHHHHhCCC--eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCE
Q psy4233 16 FNGVVATVFGAS---GYMGSYLCNKLGKQGS--QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNV 90 (303)
Q Consensus 16 ~~~~~vlVtGat---G~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~ 90 (303)
+++++|.|+|+| |.+|..+++.|++.|| +|+.+..... .... +.-..++.++-..+|.
T Consensus 5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~-~i~G----------------~~~~~sl~~lp~~~Dl 67 (447)
T TIGR02717 5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAG-EILG----------------VKAYPSVLEIPDPVDL 67 (447)
T ss_pred cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCC-ccCC----------------ccccCCHHHCCCCCCE
Confidence 467899999998 7799999999999997 6776654321 1111 1122233333345888
Q ss_pred EEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233 91 VINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138 (303)
Q Consensus 91 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~ 138 (303)
++-+.... ....+++.|.+.|++.+|.+|+....
T Consensus 68 avi~vp~~--------------~~~~~l~e~~~~gv~~~vi~s~gf~e 101 (447)
T TIGR02717 68 AVIVVPAK--------------YVPQVVEECGEKGVKGAVVITAGFKE 101 (447)
T ss_pred EEEecCHH--------------HHHHHHHHHHhcCCCEEEEECCCccc
Confidence 87665432 23357888888899888888765443
No 394
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.04 E-value=0.0012 Score=56.72 Aligned_cols=76 Identities=21% Similarity=0.246 Sum_probs=50.2
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
...+++++|+|+ |.+|+.++.+|...| .+|+++.|+.....+..........+.+ ++ +..+.+.++|+||+
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~~DivIn 191 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL---DL----ELQEELADFDLIIN 191 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee---cc----cchhccccCCEEEE
Confidence 355789999997 999999999999999 7899999975433222111111010111 11 22345677999999
Q ss_pred ccccC
Q psy4233 94 LIGRE 98 (303)
Q Consensus 94 ~a~~~ 98 (303)
+....
T Consensus 192 aTp~g 196 (278)
T PRK00258 192 ATSAG 196 (278)
T ss_pred CCcCC
Confidence 98754
No 395
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.03 E-value=0.0041 Score=55.63 Aligned_cols=76 Identities=20% Similarity=0.104 Sum_probs=55.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
.+.+|+|+|+ |-+|...++.|...|.+|++++|+.... +.+.... . ..+..+..+.+.+.+.++++|+||++++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~-~~l~~~~--g--~~v~~~~~~~~~l~~~l~~aDvVI~a~~ 239 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL-RQLDAEF--G--GRIHTRYSNAYEIEDAVKRADLLIGAVL 239 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-HHHHHhc--C--ceeEeccCCHHHHHHHHccCCEEEEccc
Confidence 4568999987 9999999999999999999998874321 1111100 1 1223445677888888999999999986
Q ss_pred cC
Q psy4233 97 RE 98 (303)
Q Consensus 97 ~~ 98 (303)
.+
T Consensus 240 ~~ 241 (370)
T TIGR00518 240 IP 241 (370)
T ss_pred cC
Confidence 53
No 396
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.03 E-value=0.00081 Score=50.25 Aligned_cols=38 Identities=21% Similarity=0.409 Sum_probs=27.7
Q ss_pred CcccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeec
Q psy4233 12 GRSSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYR 50 (303)
Q Consensus 12 ~~~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R 50 (303)
+......++|.|+|+ |.+|.+|.+.|.+.||+|..+..
T Consensus 4 ~~~~~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~s 41 (127)
T PF10727_consen 4 PATQAARLKIGIIGA-GRVGTALARALARAGHEVVGVYS 41 (127)
T ss_dssp --------EEEEECT-SCCCCHHHHHHHHTTSEEEEESS
T ss_pred cccCCCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEe
Confidence 333445679999997 99999999999999999988743
No 397
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=97.02 E-value=0.0031 Score=54.98 Aligned_cols=68 Identities=10% Similarity=0.124 Sum_probs=55.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
|++|.|.|| |.+|+-++.+....|++|++++-.++....... -..+..+.+|++.+.++.+++|+|-.
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------~~~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------DRVIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------cceeecCCCCHHHHHHHHhhCCEEEE
Confidence 578999996 999999999999999999999877655443321 34567777899999999999999853
No 398
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.02 E-value=0.0019 Score=50.79 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=30.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF 53 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 53 (303)
||+|.++|- |-+|+.+++.|+++|++|++.+|++.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~ 35 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPE 35 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchh
Confidence 689999995 99999999999999999999998753
No 399
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.02 E-value=0.012 Score=49.25 Aligned_cols=108 Identities=15% Similarity=0.133 Sum_probs=67.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch--------------------hcCCCCc--eEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR--------------------LCGDLGQ--VLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~--------------------~~~~~~~--~~~~~ 72 (303)
+...+|+|.|+ |.+|+.++..|...| .++++++...-+....-+ +...-+. ++.+.
T Consensus 22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 45679999996 999999999999999 567776654322111000 0000122 34444
Q ss_pred cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
..+ +.+.+.+.++++|+||.+.... ..-..+-++|.+.++ ++|+.++.+.++
T Consensus 101 ~~i-~~~~~~~~~~~~DlVvd~~D~~-------------~~r~~ln~~~~~~~i-p~v~~~~~g~~G 152 (240)
T TIGR02355 101 AKL-DDAELAALIAEHDIVVDCTDNV-------------EVRNQLNRQCFAAKV-PLVSGAAIRMEG 152 (240)
T ss_pred ccC-CHHHHHHHhhcCCEEEEcCCCH-------------HHHHHHHHHHHHcCC-CEEEEEecccEe
Confidence 333 3456777889999999987432 112246678888886 788766555444
No 400
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.01 E-value=0.0054 Score=49.78 Aligned_cols=107 Identities=15% Similarity=0.145 Sum_probs=65.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~ 72 (303)
++..+|+|.|+.| +|+++++.|...| .++++++...-+.... ++.....-+++.+.
T Consensus 19 L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~ 97 (197)
T cd01492 19 LRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT 97 (197)
T ss_pred HHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 3467999999755 9999999999999 4677776543211110 01001012344444
Q ss_pred cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
..+. +...+.++++|+||.+... ......+-+.|++.++ .+|+.++.+-++
T Consensus 98 ~~~~--~~~~~~~~~~dvVi~~~~~-------------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G 148 (197)
T cd01492 98 DDIS--EKPEEFFSQFDVVVATELS-------------RAELVKINELCRKLGV-KFYATGVHGLFG 148 (197)
T ss_pred cCcc--ccHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEEecCCEE
Confidence 4443 2234567889999987432 1122346678888887 788888766655
No 401
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.01 E-value=0.0097 Score=48.89 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=68.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcc--cc-c------------------chhcCCCCceEEEec
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYD--VR-D------------------LRLCGDLGQVLFQPY 73 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~--~~-~------------------~~~~~~~~~~~~~~~ 73 (303)
+...+|+|.|+ |-+|+.+++.|...|. ++++++...-+. .. . +......-+++.+..
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 35678999996 9999999999999994 577776652111 00 0 000001123455555
Q ss_pred CCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCC
Q psy4233 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPN 140 (303)
Q Consensus 74 Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~ 140 (303)
.+++ +.+.+.++++|+||.+... ...-..+.+.+.+. ++ .+|+.+..+.++.
T Consensus 105 ~i~~-~~~~~~~~~~DvVI~a~D~-------------~~~r~~l~~~~~~~~~~-p~I~~~~~~~~~~ 157 (212)
T PRK08644 105 KIDE-DNIEELFKDCDIVVEAFDN-------------AETKAMLVETVLEHPGK-KLVAASGMAGYGD 157 (212)
T ss_pred ecCH-HHHHHHHcCCCEEEECCCC-------------HHHHHHHHHHHHHhCCC-CEEEeehhhccCC
Confidence 5543 5566788899999998422 11222466777776 64 7888776655553
No 402
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=97.01 E-value=0.0022 Score=56.27 Aligned_cols=97 Identities=23% Similarity=0.238 Sum_probs=57.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC---CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG---SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
+.++|.|.||||++|+.+++.|.++. .++..++.. .+.-+.+...+ ..+++- ++ +. ..+.++|++|.
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~-~saG~~~~~~~--~~~~v~--~~-~~----~~~~~~Dvvf~ 72 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE-ESAGETLRFGG--KSVTVQ--DA-AE----FDWSQAQLAFF 72 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc-CcCCceEEECC--cceEEE--eC-ch----hhccCCCEEEE
Confidence 46799999999999999999999854 466666443 22222222111 112211 22 11 12467999999
Q ss_pred ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233 94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138 (303)
Q Consensus 94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~ 138 (303)
+++.. .+..++..+.+.|+ ++|=.|+..-.
T Consensus 73 a~p~~--------------~s~~~~~~~~~~g~-~VIDlS~~fRl 102 (336)
T PRK08040 73 VAGRE--------------ASAAYAEEATNAGC-LVIDSSGLFAL 102 (336)
T ss_pred CCCHH--------------HHHHHHHHHHHCCC-EEEECChHhcC
Confidence 88542 12245666655666 67766655543
No 403
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=97.00 E-value=0.0043 Score=56.11 Aligned_cols=71 Identities=14% Similarity=0.179 Sum_probs=53.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINL 94 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~ 94 (303)
..|+|+|+|+ |..|..+++++.+.|++|++++.++....... .-.++..|..|.+.+.++.+ ++|.|+..
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------ad~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------AHRSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh-------hhheEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 3678999996 89999999999999999999988654321111 01356778889998888887 69999864
Q ss_pred c
Q psy4233 95 I 95 (303)
Q Consensus 95 a 95 (303)
.
T Consensus 83 ~ 83 (395)
T PRK09288 83 I 83 (395)
T ss_pred e
Confidence 3
No 404
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=96.98 E-value=0.0047 Score=54.58 Aligned_cols=102 Identities=16% Similarity=0.121 Sum_probs=58.6
Q ss_pred cEEEEEcCCChhHHHHHHHHH-hCCCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 19 VVATVFGASGYMGSYLCNKLG-KQGSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll-~~g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
++|.|.||||.+|+.+++.|. ++.++ ++.++.+ .+.-.... +.. ...++. ++.+.+ .+.++|+++.+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~-~s~g~~~~-f~~-~~~~v~--~~~~~~----~~~~vDivffa 71 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTS-QLGQAAPS-FGG-TTGTLQ--DAFDID----ALKALDIIITC 71 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEch-hhCCCcCC-CCC-CcceEE--cCcccc----cccCCCEEEEc
Confidence 489999999999999999999 55554 4444332 11111111 111 112222 232221 35789999999
Q ss_pred cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCCC
Q psy4233 95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPTY 144 (303)
Q Consensus 95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~ 144 (303)
+|.. .++.+...+.++|. ..+.++..+.+--+++.
T Consensus 72 ~g~~--------------~s~~~~p~~~~aG~-~~~VIDnSSa~Rmd~dV 106 (366)
T TIGR01745 72 QGGD--------------YTNEIYPKLRESGW-QGYWIDAASSLRMKDDA 106 (366)
T ss_pred CCHH--------------HHHHHHHHHHhCCC-CeEEEECChhhhcCCCC
Confidence 9753 23457777777885 23444555555443333
No 405
>PRK08328 hypothetical protein; Provisional
Probab=96.98 E-value=0.0058 Score=50.93 Aligned_cols=109 Identities=15% Similarity=0.138 Sum_probs=68.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc-----------------------chhcCCCCceEEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD-----------------------LRLCGDLGQVLFQ 71 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~~~~ 71 (303)
....+|+|.|+ |-+|+++++.|...| .++++++...-+.... +......-+++.+
T Consensus 25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~ 103 (231)
T PRK08328 25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF 103 (231)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 34668999996 999999999999999 5677765432111000 0000111224445
Q ss_pred ecCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC
Q psy4233 72 PYHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140 (303)
Q Consensus 72 ~~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~ 140 (303)
...+ +.+.+.+.++++|+||.+.... ..-..+-++|++.++ ++|+.++.+.++.
T Consensus 104 ~~~~-~~~~~~~~l~~~D~Vid~~d~~-------------~~r~~l~~~~~~~~i-p~i~g~~~g~~G~ 157 (231)
T PRK08328 104 VGRL-SEENIDEVLKGVDVIVDCLDNF-------------ETRYLLDDYAHKKGI-PLVHGAVEGTYGQ 157 (231)
T ss_pred eccC-CHHHHHHHHhcCCEEEECCCCH-------------HHHHHHHHHHHHcCC-CEEEEeeccCEEE
Confidence 5555 4555777888999999986431 111235567888886 7888777666653
No 406
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.97 E-value=0.015 Score=48.89 Aligned_cols=108 Identities=14% Similarity=0.088 Sum_probs=67.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~ 72 (303)
....+|+|.|+ |-+|+++++.|...| .++++++...-+.... +......-+++.+.
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~ 108 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN 108 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 45779999997 999999999999999 4677665532211100 00001012345555
Q ss_pred cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
..++ .+.+.+.++++|+||.+.... ..-..+-++|.+.++ .+|+.++.+.++
T Consensus 109 ~~i~-~~~~~~~~~~~DiVi~~~D~~-------------~~r~~ln~~~~~~~i-p~v~~~~~g~~G 160 (245)
T PRK05690 109 ARLD-DDELAALIAGHDLVLDCTDNV-------------ATRNQLNRACFAAKK-PLVSGAAIRMEG 160 (245)
T ss_pred ccCC-HHHHHHHHhcCCEEEecCCCH-------------HHHHHHHHHHHHhCC-EEEEeeeccCCc
Confidence 5553 456777889999999996421 112246677888776 777765544433
No 407
>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []. It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.
Probab=96.95 E-value=0.0027 Score=55.66 Aligned_cols=89 Identities=18% Similarity=0.283 Sum_probs=67.2
Q ss_pred ccCEEEEccccCccc---cchhhhhhhcchHHHHHHHHH----hcCCceEEEEecCccCCCCCCCCCCCCCchhHHHHHH
Q psy4233 87 YSNVVINLIGREFAT---KNFTIADANVEIPARLARLSK----EMGVEKFIHISALNADPNPPTYYISGGSQFYRTKYQG 159 (303)
Q Consensus 87 ~~D~vi~~a~~~~~~---~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~y~~~K~~~ 159 (303)
+++.+|.+.|....+ .......++..-...|+++.. +.+.|++|.++|.+.... ....+|.+.|...
T Consensus 203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~~~------s~~f~Yfk~K~~L 276 (410)
T PF08732_consen 203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNNAI------SSMFPYFKTKGEL 276 (410)
T ss_pred hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcchh------hhhhhhhHHHHHH
Confidence 346788888864322 223455666666777888877 677899999999887653 4557999999999
Q ss_pred HHHHHhhC----CCEEEEeecceeeC
Q psy4233 160 EKEVLREF----PEATIFRPSDMYGS 181 (303)
Q Consensus 160 e~~~~~~~----~~~~ilrp~~~~G~ 181 (303)
|+.+.... -..+|+|||.+.|.
T Consensus 277 E~dl~~~l~~~l~~lvILRPGplvG~ 302 (410)
T PF08732_consen 277 ENDLQNLLPPKLKHLVILRPGPLVGE 302 (410)
T ss_pred HHHHHhhcccccceEEEecCccccCC
Confidence 99998862 37999999999994
No 408
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.93 E-value=0.019 Score=48.72 Aligned_cols=109 Identities=16% Similarity=0.165 Sum_probs=67.7
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch--------------------hcCCCCc--eEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR--------------------LCGDLGQ--VLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~--------------------~~~~~~~--~~~~~ 72 (303)
+...+|+|.|+ |.+|+++++.|.+.| .++++++...-.....-+ .....+. ++.+.
T Consensus 28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~ 106 (268)
T PRK15116 28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD 106 (268)
T ss_pred hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence 45679999995 999999999999999 678877654221110000 0001123 33332
Q ss_pred cCCCCHHHHHHHhc-ccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC
Q psy4233 73 YHPRNDDEIRKAIK-YSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~-~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~ 140 (303)
+..+++...+++. ++|+||.+.... ..-..|.+.|++.++ ++|.+.+.+..-+
T Consensus 107 -~~i~~e~~~~ll~~~~D~VIdaiD~~-------------~~k~~L~~~c~~~~i-p~I~~gGag~k~d 160 (268)
T PRK15116 107 -DFITPDNVAEYMSAGFSYVIDAIDSV-------------RPKAALIAYCRRNKI-PLVTTGGAGGQID 160 (268)
T ss_pred -cccChhhHHHHhcCCCCEEEEcCCCH-------------HHHHHHHHHHHHcCC-CEEEECCcccCCC
Confidence 2334566666664 599999987642 122258888998886 7776666555443
No 409
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=96.91 E-value=0.0016 Score=59.20 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=30.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF 53 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 53 (303)
|+|.|+| .|++|..++..|.+.|++|++++++..
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~ 34 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQE 34 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHH
Confidence 5899998 599999999999999999999998754
No 410
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.89 E-value=0.0056 Score=56.93 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=52.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
...+++|+|+|+ |.+|..+++.|.++|++|+++++++..............+++++.++-.. ...++|.||..
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s 85 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTS 85 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence 356789999997 99999999999999999999987643222211111111357776654322 23569999998
Q ss_pred cccC
Q psy4233 95 IGRE 98 (303)
Q Consensus 95 a~~~ 98 (303)
.|..
T Consensus 86 ~Gi~ 89 (480)
T PRK01438 86 PGWR 89 (480)
T ss_pred CCcC
Confidence 8874
No 411
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=96.89 E-value=0.0061 Score=55.81 Aligned_cols=76 Identities=12% Similarity=0.066 Sum_probs=54.2
Q ss_pred cCCCcEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCH
Q psy4233 15 SFNGVVATVFGA----------------SGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRND 78 (303)
Q Consensus 15 ~~~~~~vlVtGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 78 (303)
.+.+++||||+| ||..|.+|++++..+|.+|++++-.... . ...+++++... ..
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~--~------~p~~v~~i~V~--ta 322 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL--A------DPQGVKVIHVE--SA 322 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC--C------CCCCceEEEec--CH
Confidence 478899999964 7999999999999999999998743221 1 11346666554 45
Q ss_pred HHHHHHhcc---cCEEEEccccCcc
Q psy4233 79 DEIRKAIKY---SNVVINLIGREFA 100 (303)
Q Consensus 79 ~~~~~~~~~---~D~vi~~a~~~~~ 100 (303)
.++.+.+.. .|++|++|+..+.
T Consensus 323 ~eM~~av~~~~~~Di~I~aAAVaDy 347 (475)
T PRK13982 323 RQMLAAVEAALPADIAIFAAAVADW 347 (475)
T ss_pred HHHHHHHHhhCCCCEEEEeccccce
Confidence 555444432 7999999997443
No 412
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.87 E-value=0.0026 Score=55.36 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=66.5
Q ss_pred EEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchh--cC--C--CCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 21 ATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRL--CG--D--LGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 21 vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~--~~--~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
|.|+|| |.+|..++..|..+|. +|+++++++... ..... .. . ..... +... .| . +.++++|+||.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~-~g~~~dl~~~~~~~~~~~~-I~~t-~d---~-~~l~dADiVIi 72 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLP-QGKALDISQAAPILGSDTK-VTGT-ND---Y-EDIAGSDVVVI 72 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHH-HHHHHHHHHhhhhcCCCeE-EEEc-CC---H-HHhCCCCEEEE
Confidence 578998 9999999999998875 999999875422 11111 00 0 00111 1111 12 2 34789999999
Q ss_pred ccccCcc--ccchhhhhhhcchHHHHHHHHHhcCCceE-EEEe
Q psy4233 94 LIGREFA--TKNFTIADANVEIPARLARLSKEMGVEKF-IHIS 133 (303)
Q Consensus 94 ~a~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-v~~S 133 (303)
+++.... ....+....|+...+.+++.+.+...+.+ |.+|
T Consensus 73 t~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 73 TAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred ecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9986422 22334556788888889998888775544 4444
No 413
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=96.86 E-value=0.013 Score=49.38 Aligned_cols=93 Identities=16% Similarity=0.259 Sum_probs=67.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a~ 96 (303)
|+|||.|||+ =|..|+..|.++|+ |++.+-..... .... ...+..+++.+-+.|.+.+.+.++ +++.||+..-
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~-~~~~--~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATH 75 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGG-ELLK--PELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATH 75 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhH-hhhc--cccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCC
Confidence 7999999986 59999999999998 65544432211 1110 111346788888889999999986 4999999976
Q ss_pred cCccccchhhhhhhcchHHHHHHHHHhcCCc
Q psy4233 97 REFATKNFTIADANVEIPARLARLSKEMGVE 127 (303)
Q Consensus 97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 127 (303)
+.. ...+.++.++|++.|++
T Consensus 76 PfA-----------~~is~na~~a~~~~~ip 95 (249)
T PF02571_consen 76 PFA-----------AEISQNAIEACRELGIP 95 (249)
T ss_pred chH-----------HHHHHHHHHHHhhcCcc
Confidence 542 23466889999999884
No 414
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.85 E-value=0.0017 Score=56.04 Aligned_cols=35 Identities=26% Similarity=0.193 Sum_probs=31.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF 53 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 53 (303)
.++|.|+|+ |.+|..++..|...|++|++.+++..
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~ 37 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDE 37 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence 468999996 99999999999999999999998754
No 415
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.84 E-value=0.0019 Score=55.59 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=51.7
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
++.+++++|+|+ |.+|+.+++.|...|.+|++.+|+.... ...... +... ...+++.+.++++|+||++
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~-~~~~~~----g~~~-----~~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL-ARITEM----GLIP-----FPLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHC----CCee-----ecHHHHHHHhccCCEEEEC
Confidence 456789999997 8899999999999999999999975422 111111 1111 1345677788899999998
Q ss_pred cc
Q psy4233 95 IG 96 (303)
Q Consensus 95 a~ 96 (303)
..
T Consensus 217 ~P 218 (287)
T TIGR02853 217 IP 218 (287)
T ss_pred CC
Confidence 74
No 416
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.83 E-value=0.002 Score=58.94 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=46.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR 97 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~ 97 (303)
|+|+|+||+|.+|..+++.|.+.|++|++.+|++....+..... ++. -..+..+.+.++|+||-+...
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~----gv~-------~~~~~~e~~~~aDvVIlavp~ 68 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL----GVE-------YANDNIDAAKDADIVIISVPI 68 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc----CCe-------eccCHHHHhccCCEEEEecCH
Confidence 58999999999999999999999999999998754321111110 121 011233456778998888754
No 417
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.81 E-value=0.0022 Score=55.52 Aligned_cols=70 Identities=17% Similarity=0.185 Sum_probs=51.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
+.+++++|+|+ |.+|+.++..|...|.+|++.+|++... ..... .+.+++ +.+++.+.+.++|+||+++
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~~----~G~~~~-----~~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL-ARITE----MGLSPF-----HLSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----cCCeee-----cHHHHHHHhCCCCEEEECC
Confidence 45789999996 8899999999999999999999985431 11111 112222 3356677888999999986
Q ss_pred c
Q psy4233 96 G 96 (303)
Q Consensus 96 ~ 96 (303)
+
T Consensus 219 p 219 (296)
T PRK08306 219 P 219 (296)
T ss_pred C
Confidence 4
No 418
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.79 E-value=0.0049 Score=52.83 Aligned_cols=57 Identities=18% Similarity=0.349 Sum_probs=46.7
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
+..+++|+|+|++|.+|+.++..|+++|..|+++.|.. .++.+.++++|+||++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t--------------------------~~L~~~~~~aDIvI~A 209 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT--------------------------QNLPELVKQADIIVGA 209 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc--------------------------hhHHHHhccCCEEEEc
Confidence 45788999999999999999999999999888887631 1244555789999999
Q ss_pred ccc
Q psy4233 95 IGR 97 (303)
Q Consensus 95 a~~ 97 (303)
.|.
T Consensus 210 tG~ 212 (283)
T PRK14192 210 VGK 212 (283)
T ss_pred cCC
Confidence 974
No 419
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.78 E-value=0.019 Score=51.05 Aligned_cols=107 Identities=15% Similarity=0.081 Sum_probs=67.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~ 72 (303)
+...+|+|.|+ |.+|+++++.|...| .++++++...-+.... ++.....-+++.+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 45679999996 999999999999999 4677766653211110 00000012244555
Q ss_pred cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~ 138 (303)
..++ .+...+.++++|+||.+.... ..-..+-++|.+.++ .+|+.++.+-+
T Consensus 105 ~~i~-~~~~~~~~~~~DvVvd~~d~~-------------~~r~~~n~~c~~~~i-p~v~~~~~g~~ 155 (355)
T PRK05597 105 RRLT-WSNALDELRDADVILDGSDNF-------------DTRHLASWAAARLGI-PHVWASILGFD 155 (355)
T ss_pred eecC-HHHHHHHHhCCCEEEECCCCH-------------HHHHHHHHHHHHcCC-CEEEEEEecCe
Confidence 5553 455667889999999997431 111235677888886 67776654443
No 420
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.78 E-value=0.015 Score=46.18 Aligned_cols=105 Identities=14% Similarity=0.142 Sum_probs=63.8
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCc--ccc-c------------------chhcCCCCceEEEecCCCC
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFY--DVR-D------------------LRLCGDLGQVLFQPYHPRN 77 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~--~~~-~------------------~~~~~~~~~~~~~~~Dl~d 77 (303)
+|+|.|+ |-+|+.+++.|...|. ++++++...-+ ... . +......-+++.+...+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~- 78 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID- 78 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence 5899996 9999999999999995 58887765311 100 0 000000123444555553
Q ss_pred HHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhc-CCceEEEEecCccCCC
Q psy4233 78 DDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEM-GVEKFIHISALNADPN 140 (303)
Q Consensus 78 ~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~ 140 (303)
.+.+.+.++++|+||.+.... ..-..+.+.+.+. ++ .+|+.+..+.++.
T Consensus 79 ~~~~~~~l~~~DlVi~~~d~~-------------~~r~~i~~~~~~~~~i-p~i~~~~~~~~~~ 128 (174)
T cd01487 79 ENNLEGLFGDCDIVVEAFDNA-------------ETKAMLAESLLGNKNK-PVVCASGMAGFGD 128 (174)
T ss_pred hhhHHHHhcCCCEEEECCCCH-------------HHHHHHHHHHHHHCCC-CEEEEehhhccCC
Confidence 355777889999999984321 1112366666665 64 7777665555543
No 421
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.77 E-value=0.0031 Score=53.95 Aligned_cols=74 Identities=15% Similarity=0.090 Sum_probs=47.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
.+++++|+|+ |.+|+.++..|.+.|++|+++.|+..+..+..........+..+ ++.+ ..+.++|+||++.+
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~-----~~~~~~DivInatp 187 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE-----LPLHRVDLIINATS 187 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh-----hcccCccEEEECCC
Confidence 4678999998 89999999999999999999988754322221111111112221 1111 12356999999988
Q ss_pred cC
Q psy4233 97 RE 98 (303)
Q Consensus 97 ~~ 98 (303)
..
T Consensus 188 ~g 189 (270)
T TIGR00507 188 AG 189 (270)
T ss_pred CC
Confidence 64
No 422
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.77 E-value=0.019 Score=49.95 Aligned_cols=105 Identities=15% Similarity=0.076 Sum_probs=66.5
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEecCCC
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQPYHPR 76 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~~Dl~ 76 (303)
+|||+|+ |.+|.++++.|...| .++++++...-+.... ++.....-+++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899996 999999999999999 5677765543221111 000011123556667776
Q ss_pred CHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 77 NDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 77 d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
+.....+.++++|+||.+.-. ...-..+-+.|...++ .+|..++.+.+|
T Consensus 80 ~~~~~~~f~~~~DvVv~a~Dn-------------~~ar~~in~~c~~~~i-p~I~~gt~G~~G 128 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALDN-------------LAARRHVNKMCLAADV-PLIESGTTGFLG 128 (312)
T ss_pred CccchHHHHhcCCEEEECCCC-------------HHHHHHHHHHHHHCCC-CEEEEecCccee
Confidence 644445678899999988642 1222246677777776 788777766544
No 423
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.77 E-value=0.0025 Score=50.84 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=48.7
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
....+++|.|+| .|-||+.+++.|..-|.+|++.+|+....... .. ..+ ...+++++++.+|+|+.
T Consensus 32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~----~~~--------~~~~l~ell~~aDiv~~ 97 (178)
T PF02826_consen 32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DE----FGV--------EYVSLDELLAQADIVSL 97 (178)
T ss_dssp S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HH----TTE--------EESSHHHHHHH-SEEEE
T ss_pred cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhc-cc----ccc--------eeeehhhhcchhhhhhh
Confidence 346789999999 59999999999999999999999986543201 00 001 23356678888999997
Q ss_pred cccc
Q psy4233 94 LIGR 97 (303)
Q Consensus 94 ~a~~ 97 (303)
+...
T Consensus 98 ~~pl 101 (178)
T PF02826_consen 98 HLPL 101 (178)
T ss_dssp -SSS
T ss_pred hhcc
Confidence 7664
No 424
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.76 E-value=0.002 Score=53.32 Aligned_cols=36 Identities=33% Similarity=0.410 Sum_probs=32.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY 54 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 54 (303)
|||.|+||+|.+|+.+++.|.+.|++|++.+|++..
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~ 36 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK 36 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence 589999999999999999999999999999887543
No 425
>PRK08223 hypothetical protein; Validated
Probab=96.74 E-value=0.022 Score=48.75 Aligned_cols=108 Identities=11% Similarity=0.058 Sum_probs=65.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccch--------------------hcCCCC--ceEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLR--------------------LCGDLG--QVLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~--------------------~~~~~~--~~~~~~ 72 (303)
+...+|+|+|+ |-+|+.++..|...| .++++++...-+....-+ ....-+ +++.+.
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 34668999996 999999999999999 566666554322111000 000012 244455
Q ss_pred cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 137 (303)
..++ .+...++++++|+||.+.-.. ++..-..+-++|.+.++ .+|+.+..+.
T Consensus 104 ~~l~-~~n~~~ll~~~DlVvD~~D~~-----------~~~~r~~ln~~c~~~~i-P~V~~~~~g~ 155 (287)
T PRK08223 104 EGIG-KENADAFLDGVDVYVDGLDFF-----------EFDARRLVFAACQQRGI-PALTAAPLGM 155 (287)
T ss_pred cccC-ccCHHHHHhCCCEEEECCCCC-----------cHHHHHHHHHHHHHcCC-CEEEEeccCC
Confidence 5553 445677888999998765321 01122346778888886 7777665443
No 426
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.71 E-value=0.0022 Score=56.46 Aligned_cols=79 Identities=22% Similarity=0.216 Sum_probs=52.5
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCC----CceE-EEe---cC--CCCHHHHHHHhccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL----GQVL-FQP---YH--PRNDDEIRKAIKYS 88 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~----~~~~-~~~---~D--l~d~~~~~~~~~~~ 88 (303)
|||.|.| +||+|....-.|.+.||+|++++..+.+ .+.+.. +.. ++++ +++ .+ ++-..+...+++++
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~K-V~~ln~-g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~a 77 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESK-VELLNK-GISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDA 77 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHhC-CCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcC
Confidence 7999999 6999999999999999999999886432 222110 000 1110 011 11 33345566788899
Q ss_pred CEEEEccccCcc
Q psy4233 89 NVVINLIGREFA 100 (303)
Q Consensus 89 D~vi~~a~~~~~ 100 (303)
|++|-+.|.+..
T Consensus 78 dv~fIavgTP~~ 89 (414)
T COG1004 78 DVVFIAVGTPPD 89 (414)
T ss_pred CEEEEEcCCCCC
Confidence 999999987543
No 427
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.70 E-value=0.0063 Score=53.19 Aligned_cols=77 Identities=12% Similarity=0.021 Sum_probs=49.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc---ch-------hcCCCCceEEEecCCCCHHHHHHHhcc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD---LR-------LCGDLGQVLFQPYHPRNDDEIRKAIKY 87 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~-------~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 87 (303)
.++|.|+|+ |.+|..++..|+..|++|++.++++...... +. ..+..+. -....+.-.+++.+++++
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~i~~~~~l~~av~~ 83 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPG--ASPARLRFVATIEACVAD 83 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChh--hHHhhceecCCHHHHhcC
Confidence 468999996 9999999999999999999999975432110 00 0000000 000111122346677889
Q ss_pred cCEEEEcccc
Q psy4233 88 SNVVINLIGR 97 (303)
Q Consensus 88 ~D~vi~~a~~ 97 (303)
+|.||-++..
T Consensus 84 aDlViEavpE 93 (321)
T PRK07066 84 ADFIQESAPE 93 (321)
T ss_pred CCEEEECCcC
Confidence 9999998754
No 428
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.68 E-value=0.0088 Score=48.75 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=49.3
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
+++++|+|+|| |-+|...++.|++.|++|+++++........+.. ...+.+..-++.. ..+.++|.||-+.
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~---~~~i~~~~~~~~~-----~~l~~adlViaaT 78 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVE---EGKIRWKQKEFEP-----SDIVDAFLVIAAT 78 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh---CCCEEEEecCCCh-----hhcCCceEEEEcC
Confidence 56889999997 9999999999999999999987653322222111 1335555544332 2356789888775
Q ss_pred c
Q psy4233 96 G 96 (303)
Q Consensus 96 ~ 96 (303)
+
T Consensus 79 ~ 79 (202)
T PRK06718 79 N 79 (202)
T ss_pred C
Confidence 4
No 429
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.68 E-value=0.0079 Score=51.38 Aligned_cols=58 Identities=19% Similarity=0.355 Sum_probs=49.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
.+.+++|+|+|+++.+|..++..|+++|..|+.+.++. .++.+.++++|+||.+
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t--------------------------~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS--------------------------KDMASYLKDADVIVSA 208 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------hhHHHHHhhCCEEEEC
Confidence 46789999999999999999999999999999887642 1366778889999999
Q ss_pred cccC
Q psy4233 95 IGRE 98 (303)
Q Consensus 95 a~~~ 98 (303)
+|..
T Consensus 209 vg~p 212 (286)
T PRK14175 209 VGKP 212 (286)
T ss_pred CCCC
Confidence 9874
No 430
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.67 E-value=0.012 Score=52.78 Aligned_cols=107 Identities=15% Similarity=0.073 Sum_probs=67.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcc------------------cccch--hcCCCCc--eEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYD------------------VRDLR--LCGDLGQ--VLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~------------------~~~~~--~~~~~~~--~~~~~ 72 (303)
+...+|+|.|+ |.+|++++..|...|. +++++++..-+. .+... +...-+. ++.+.
T Consensus 133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 34668999986 8899999999999994 688877752110 00000 0000122 34444
Q ss_pred cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccC
Q psy4233 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNAD 138 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~ 138 (303)
..+ +.+.+.+.++++|+||++..... .-..+-++|.+.++ .+|+.+..+.+
T Consensus 212 ~~~-~~~~~~~~~~~~D~Vv~~~d~~~-------------~r~~ln~~~~~~~i-p~i~~~~~g~~ 262 (376)
T PRK08762 212 ERV-TSDNVEALLQDVDVVVDGADNFP-------------TRYLLNDACVKLGK-PLVYGAVFRFE 262 (376)
T ss_pred ccC-ChHHHHHHHhCCCEEEECCCCHH-------------HHHHHHHHHHHcCC-CEEEEEeccCE
Confidence 444 34566778889999999975321 11236678888886 78887755443
No 431
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.67 E-value=0.0027 Score=57.49 Aligned_cols=75 Identities=16% Similarity=0.175 Sum_probs=53.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
..+++|+|.|+ |-+|+.+++.|.+.| .++++..|+.... ..+.... +. +.....+++.+.+.++|+||++
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra-~~La~~~--~~-----~~~~~~~~l~~~l~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKA-QKITSAF--RN-----ASAHYLSELPQLIKKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHh--cC-----CeEecHHHHHHHhccCCEEEEC
Confidence 45789999997 999999999999999 5788888875432 3222110 11 1223456777888999999999
Q ss_pred cccCc
Q psy4233 95 IGREF 99 (303)
Q Consensus 95 a~~~~ 99 (303)
.+.+.
T Consensus 250 T~a~~ 254 (414)
T PRK13940 250 VNVLE 254 (414)
T ss_pred cCCCC
Confidence 98754
No 432
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.66 E-value=0.0027 Score=55.52 Aligned_cols=74 Identities=26% Similarity=0.314 Sum_probs=52.4
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
..+++|+|+|+ |-+|..+++.|...| .+|++++|+.....+.....+ . +..+.+++.+.+.++|+||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g----~-----~~~~~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG----G-----NAVPLDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC----C-----eEEeHHHHHHHHhcCCEEEEC
Confidence 35789999997 999999999999876 688888887543322211111 1 122345677778889999999
Q ss_pred cccCc
Q psy4233 95 IGREF 99 (303)
Q Consensus 95 a~~~~ 99 (303)
.+...
T Consensus 246 t~~~~ 250 (311)
T cd05213 246 TGAPH 250 (311)
T ss_pred CCCCc
Confidence 88643
No 433
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.65 E-value=0.0088 Score=51.13 Aligned_cols=74 Identities=12% Similarity=0.048 Sum_probs=45.7
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
++|++++|.|.| .|.||+.+++.|.+. ++++.++..+..+..+...... . .. .-..+ +++++.++|+|
T Consensus 2 ~~m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~--g-~~---~~~~~---~eell~~~D~V 71 (271)
T PRK13302 2 SSRPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGL--R-RP---PPVVP---LDQLATHADIV 71 (271)
T ss_pred CCCCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhc--C-CC---cccCC---HHHHhcCCCEE
Confidence 346678999999 599999999999873 6888765443333222211100 0 00 00123 34456779999
Q ss_pred EEcccc
Q psy4233 92 INLIGR 97 (303)
Q Consensus 92 i~~a~~ 97 (303)
+-+++.
T Consensus 72 vi~tp~ 77 (271)
T PRK13302 72 VEAAPA 77 (271)
T ss_pred EECCCc
Confidence 999864
No 434
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.65 E-value=0.003 Score=57.52 Aligned_cols=73 Identities=22% Similarity=0.294 Sum_probs=52.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
..+++|+|+|+ |-+|..+++.|...| .+|++++|+...........+ ... .+.+++.+.+.++|+||.+
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g----~~~-----i~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG----GEA-----VKFEDLEEYLAEADIVISS 247 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC----CeE-----eeHHHHHHHHhhCCEEEEC
Confidence 45679999997 999999999999999 789999997543222211111 111 2335677788899999999
Q ss_pred cccC
Q psy4233 95 IGRE 98 (303)
Q Consensus 95 a~~~ 98 (303)
.+..
T Consensus 248 T~s~ 251 (417)
T TIGR01035 248 TGAP 251 (417)
T ss_pred CCCC
Confidence 7654
No 435
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.64 E-value=0.0087 Score=46.65 Aligned_cols=69 Identities=14% Similarity=0.244 Sum_probs=45.9
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
+++++|+|+|| |-+|...++.|++.|++|++++.... +.+.. ++.+++..-.+... -+.++|.||-+.
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~~---~~l~~---l~~i~~~~~~~~~~-----dl~~a~lViaaT 78 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEIC---KEMKE---LPYITWKQKTFSND-----DIKDAHLIYAAT 78 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCccC---HHHHh---ccCcEEEecccChh-----cCCCceEEEECC
Confidence 46889999997 99999999999999999998853222 22211 13455544443222 246688887664
Q ss_pred c
Q psy4233 96 G 96 (303)
Q Consensus 96 ~ 96 (303)
.
T Consensus 79 ~ 79 (157)
T PRK06719 79 N 79 (157)
T ss_pred C
Confidence 3
No 436
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=96.64 E-value=0.0049 Score=45.85 Aligned_cols=74 Identities=11% Similarity=0.106 Sum_probs=43.8
Q ss_pred EEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcccc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGR 97 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~ 97 (303)
|+.|+|++|.+|..+++.|.+. ++++.++..++.+..+..... .+++..+..+..+.+.+. ..++|+||.+.+.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~DvV~~~~~~ 75 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEA--GPHLKGEVVLELEPEDFE--ELAVDIVFLALPH 75 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHH--CcccccccccccccCChh--hcCCCEEEEcCCc
Confidence 5899999999999999999995 788888733332222222111 122211111112223332 2579999988765
No 437
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.64 E-value=0.035 Score=46.14 Aligned_cols=109 Identities=12% Similarity=0.120 Sum_probs=65.8
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc---c----------h-------hcCCCCc--eEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD---L----------R-------LCGDLGQ--VLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~---~----------~-------~~~~~~~--~~~~~ 72 (303)
++..+|+|.|. |-+|+++++.|.+.| .++++++...-+.... + + +...-+. ++.+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 34679999995 999999999999999 4677765542111000 0 0 0000122 34444
Q ss_pred cCCCCHHHHHHHhc-ccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCC
Q psy4233 73 YHPRNDDEIRKAIK-YSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPN 140 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~-~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~ 140 (303)
..+ +++.....+. ++|+||.+.... ..-..|.+.|++.++ ++|...+.+...+
T Consensus 88 ~~i-~~~~~~~l~~~~~D~VvdaiD~~-------------~~k~~L~~~c~~~~i-p~I~s~g~g~~~d 141 (231)
T cd00755 88 EFL-TPDNSEDLLGGDPDFVVDAIDSI-------------RAKVALIAYCRKRKI-PVISSMGAGGKLD 141 (231)
T ss_pred eec-CHhHHHHHhcCCCCEEEEcCCCH-------------HHHHHHHHHHHHhCC-CEEEEeCCcCCCC
Confidence 443 3455666664 599999986431 222357888998886 7776655555443
No 438
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=96.63 E-value=0.0083 Score=53.06 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=57.9
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchh-cC-----CCCc-eE-EEecCCCCHHHHHHHhccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRL-CG-----DLGQ-VL-FQPYHPRNDDEIRKAIKYS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~-~~-----~~~~-~~-~~~~Dl~d~~~~~~~~~~~ 88 (303)
|+||.|.|+ |.+|+.+++.+.++ +.++.++.....+....+.. .+ ..+. .. +-..++.-.+....++.++
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 479999998 99999999998875 47888876543221111110 00 0000 00 0000111112234455789
Q ss_pred CEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233 89 NVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135 (303)
Q Consensus 89 D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 135 (303)
|+||.+++... ....++.+.++| +++|+.++.
T Consensus 80 DVVIdaT~~~~--------------~~e~a~~~~~aG-k~VI~~~~~ 111 (341)
T PRK04207 80 DIVVDATPGGV--------------GAKNKELYEKAG-VKAIFQGGE 111 (341)
T ss_pred CEEEECCCchh--------------hHHHHHHHHHCC-CEEEEcCCC
Confidence 99999986532 124566777778 577776664
No 439
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.60 E-value=0.0065 Score=53.43 Aligned_cols=100 Identities=18% Similarity=0.190 Sum_probs=61.5
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhc--ccCEEEEc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIK--YSNVVINL 94 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~D~vi~~ 94 (303)
+.+|||+||+|-+|+..++.+...|..+++.+.+..+.. ..+..+ -.+.+...-.| .+.+.++.. ++|+|+++
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lG---Ad~vi~y~~~~~~~~v~~~t~g~gvDvv~D~ 218 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELG---ADHVINYREEDFVEQVRELTGGKGVDVVLDT 218 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcC---CCEEEcCCcccHHHHHHHHcCCCCceEEEEC
Confidence 679999999999999999999999976666666543332 322222 12223222222 233334443 49999999
Q ss_pred cccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233 95 IGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137 (303)
Q Consensus 95 a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 137 (303)
.|..... ..+++++.. .+++.+...+.
T Consensus 219 vG~~~~~--------------~~l~~l~~~--G~lv~ig~~~g 245 (326)
T COG0604 219 VGGDTFA--------------ASLAALAPG--GRLVSIGALSG 245 (326)
T ss_pred CCHHHHH--------------HHHHHhccC--CEEEEEecCCC
Confidence 8863211 345555544 37888877664
No 440
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.60 E-value=0.0059 Score=53.29 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=32.1
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF 53 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 53 (303)
+.|+|.|.|+ |.+|+.+++.|.+.|++|++..|+..
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4579999985 99999999999999999999999753
No 441
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.59 E-value=0.0033 Score=57.35 Aligned_cols=73 Identities=25% Similarity=0.314 Sum_probs=52.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
..+++|+|+|+ |-+|..+++.|...|. +|++..|+...........+ ++..+.+++.+.+.++|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---------~~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---------GEAIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---------CcEeeHHHHHHHhccCCEEEEC
Confidence 45789999996 9999999999999996 78888887543222211111 1223345667778889999999
Q ss_pred cccC
Q psy4233 95 IGRE 98 (303)
Q Consensus 95 a~~~ 98 (303)
.+..
T Consensus 250 T~s~ 253 (423)
T PRK00045 250 TGAP 253 (423)
T ss_pred CCCC
Confidence 8754
No 442
>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated
Probab=96.57 E-value=0.022 Score=52.58 Aligned_cols=73 Identities=11% Similarity=-0.074 Sum_probs=47.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEec-------CCCCHHHHHHHhc--cc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY-------HPRNDDEIRKAIK--YS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~--~~ 88 (303)
|+||||.|+ |.+|..+++++.+.|++|+++...........+. . -+.+.. +..|.+.+.++.+ ++
T Consensus 2 ~k~iLi~g~-g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~~~~----a-d~~~~~~~~~~~~~y~d~~~l~~~a~~~~i 75 (451)
T PRK08591 2 FDKILIANR-GEIALRIIRACKELGIKTVAVHSTADRDALHVQL----A-DEAVCIGPAPSKKSYLNIPAIISAAEITGA 75 (451)
T ss_pred cceEEEECC-CHHHHHHHHHHHHcCCeEEEEcChhhccCCCHhH----C-CEEEEeCCCCcccccCCHHHHHHHHHHhCC
Confidence 689999985 9999999999999999999885543322111111 1 122221 3456666666543 49
Q ss_pred CEEEEccc
Q psy4233 89 NVVINLIG 96 (303)
Q Consensus 89 D~vi~~a~ 96 (303)
|+|+-..+
T Consensus 76 d~I~p~~~ 83 (451)
T PRK08591 76 DAIHPGYG 83 (451)
T ss_pred CEEEECCC
Confidence 99887554
No 443
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=96.53 E-value=0.022 Score=49.46 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=68.4
Q ss_pred EEcCCChhHHHHHHHHHhCC--CeEEEeecCCCccccc-chhc----CCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 23 VFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRD-LRLC----GDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 23 VtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~-~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
|+|+ |.||+.++..|+..+ .++.+++.+....... ..+. .....+.+. + .| .+.++++|+||.+|
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~----~~~~~daDivVita 72 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GD----YSDCKDADLVVITA 72 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CC----HHHHCCCCEEEECC
Confidence 4575 999999999999887 4788888864322111 1110 000122222 2 22 24678999999999
Q ss_pred ccC--ccccchhhhhhhcchHHHHHHHHHhcCCc-eEEEEe
Q psy4233 96 GRE--FATKNFTIADANVEIPARLARLSKEMGVE-KFIHIS 133 (303)
Q Consensus 96 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 133 (303)
|.. ....+.+..+.|....+.+++.+++++.+ .++.+|
T Consensus 73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 113 (299)
T TIGR01771 73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT 113 (299)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 973 22456688899999999999999988755 555555
No 444
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=96.52 E-value=0.25 Score=42.52 Aligned_cols=90 Identities=18% Similarity=0.176 Sum_probs=57.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEcc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLI 95 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a 95 (303)
..+|+|.|.||.+|+.+.+.++..|+++++.+. +....+. +. .+.-..++.++-+. +|.++-+.
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V~-p~~~~~~---------v~----G~~~y~sv~dlp~~~~~Dlavi~v 71 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGVT-PGKGGTT---------VL----GLPVFDSVKEAVEETGANASVIFV 71 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEEC-CCCCcce---------ec----CeeccCCHHHHhhccCCCEEEEec
Confidence 458999999999999999999999988555443 2211111 11 11222333333333 79888776
Q ss_pred ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233 96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135 (303)
Q Consensus 96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 135 (303)
... ....+++.|.+.|++.+|.+|+.
T Consensus 72 pa~--------------~v~~~l~e~~~~Gvk~avIis~G 97 (286)
T TIGR01019 72 PAP--------------FAADAIFEAIDAGIELIVCITEG 97 (286)
T ss_pred CHH--------------HHHHHHHHHHHCCCCEEEEECCC
Confidence 532 12256777777899888877755
No 445
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.51 E-value=0.0092 Score=51.31 Aligned_cols=58 Identities=17% Similarity=0.311 Sum_probs=48.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
++.+++|.|+|.+|.+|..++..|+++|+.|++..|... ++.+..+++|+||-+
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~--------------------------~l~e~~~~ADIVIsa 209 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST--------------------------DAKALCRQADIVVAA 209 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC--------------------------CHHHHHhcCCEEEEe
Confidence 467899999999999999999999999999999866531 245566789999998
Q ss_pred cccC
Q psy4233 95 IGRE 98 (303)
Q Consensus 95 a~~~ 98 (303)
.|..
T Consensus 210 vg~~ 213 (301)
T PRK14194 210 VGRP 213 (301)
T ss_pred cCCh
Confidence 8864
No 446
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.51 E-value=0.0075 Score=49.08 Aligned_cols=38 Identities=26% Similarity=0.441 Sum_probs=33.8
Q ss_pred ccCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC
Q psy4233 14 SSFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN 52 (303)
Q Consensus 14 ~~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 52 (303)
.++.+|+|+|+|. |.+|+++++.|.+.|++|++.+++.
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~ 61 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE 61 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4577899999997 8999999999999999999887764
No 447
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit. This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.
Probab=96.51 E-value=0.022 Score=52.52 Aligned_cols=73 Identities=11% Similarity=-0.085 Sum_probs=47.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEec-------CCCCHHHHHHHhc--cc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY-------HPRNDDEIRKAIK--YS 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~--~~ 88 (303)
++||||.|+ |.++..+++++.+.|++|++++..........+. . -+.+.. +..|.+.+.++.+ ++
T Consensus 2 ~kkili~g~-g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~~----a-D~~~~~~~~~~~~~y~d~~~l~~~a~~~~i 75 (449)
T TIGR00514 2 LDKILIANR-GEIALRILRACKELGIKTVAVHSTADRDALHVLL----A-DEAVCIGPAPSAKSYLNIPNIISAAEITGA 75 (449)
T ss_pred cceEEEeCC-CHHHHHHHHHHHHcCCeEEEEEChhhhccccccc----C-CEEEEcCCCCchhchhCHHHHHHHHHHhCC
Confidence 679999985 9999999999999999999986543222111111 1 122221 3445555665443 49
Q ss_pred CEEEEccc
Q psy4233 89 NVVINLIG 96 (303)
Q Consensus 89 D~vi~~a~ 96 (303)
|+|+-..+
T Consensus 76 d~I~pg~g 83 (449)
T TIGR00514 76 DAIHPGYG 83 (449)
T ss_pred CEEEeCCC
Confidence 99987654
No 448
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=96.51 E-value=0.0081 Score=44.25 Aligned_cols=85 Identities=12% Similarity=0.102 Sum_probs=49.1
Q ss_pred cEEEEEcCC---ChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 19 VVATVFGAS---GYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 19 ~~vlVtGat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
++|+|+|++ +..|..+++.|.++|++|+.+.-... .....+ ..-++. +.-..+|.++.+.
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~-~i~G~~----------~y~sl~------e~p~~iDlavv~~ 63 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGG-EILGIK----------CYPSLA------EIPEPIDLAVVCV 63 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCS-EETTEE-----------BSSGG------GCSST-SEEEE-S
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCce-EECcEE----------eecccc------CCCCCCCEEEEEc
Confidence 579999998 77999999999999999998755432 111111 111121 1113478887776
Q ss_pred ccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233 96 GREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134 (303)
Q Consensus 96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 134 (303)
... .+..+++.+.+.|++.+++.++
T Consensus 64 ~~~--------------~~~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 64 PPD--------------KVPEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp -HH--------------HHHHHHHHHHHHT-SEEEE-TT
T ss_pred CHH--------------HHHHHHHHHHHcCCCEEEEEcc
Confidence 432 2235778888888888888876
No 449
>PRK08462 biotin carboxylase; Validated
Probab=96.50 E-value=0.026 Score=51.98 Aligned_cols=93 Identities=14% Similarity=0.056 Sum_probs=60.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEec-------CCCCHHHHHHHhcc--c
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPY-------HPRNDDEIRKAIKY--S 88 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~--~ 88 (303)
++||||.|+ |.++..+++++.+.|++|+++....+......... -+.+.. +..|.+.+.++.+. +
T Consensus 4 ~k~ili~~~-g~~~~~~~~~~~~~G~~~v~~~~~~d~~~~~~~~a-----d~~~~~~~~~~~~~y~~~~~l~~~~~~~~~ 77 (445)
T PRK08462 4 IKRILIANR-GEIALRAIRTIQEMGKEAIAIYSTADKDALYLKYA-----DAKICIGGAKSSESYLNIPAIISAAEIFEA 77 (445)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEechhhcCCchhhhC-----CEEEEeCCCchhcccCCHHHHHHHHHHcCC
Confidence 679999996 99999999999999999998876544322222211 122222 55666777766554 8
Q ss_pred CEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEE
Q psy4233 89 NVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFI 130 (303)
Q Consensus 89 D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v 130 (303)
|+|+-..+..... ..+.+.++..|+ +++
T Consensus 78 D~i~pg~g~lse~-------------~~~a~~~e~~Gi-~~~ 105 (445)
T PRK08462 78 DAIFPGYGFLSEN-------------QNFVEICSHHNI-KFI 105 (445)
T ss_pred CEEEECCCccccC-------------HHHHHHHHHCCC-eEE
Confidence 9998876532111 135666777776 444
No 450
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.50 E-value=0.029 Score=51.68 Aligned_cols=76 Identities=14% Similarity=0.066 Sum_probs=52.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcc-cccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYD-VRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
+.+++|+|+|+ |..|..+++.|.++|++|.+.+...... .+.+.. ...++.+..++..+ . .+.++|.||..
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~--~~~gi~~~~g~~~~-~----~~~~~d~vv~s 74 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGK--MFDGLVFYTGRLKD-A----LDNGFDILALS 74 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhh--ccCCcEEEeCCCCH-H----HHhCCCEEEEC
Confidence 45789999997 6899999999999999999988754321 111111 01256666665321 1 34679999999
Q ss_pred cccCc
Q psy4233 95 IGREF 99 (303)
Q Consensus 95 a~~~~ 99 (303)
.|...
T Consensus 75 pgi~~ 79 (445)
T PRK04308 75 PGISE 79 (445)
T ss_pred CCCCC
Confidence 98753
No 451
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.48 E-value=0.054 Score=44.05 Aligned_cols=77 Identities=16% Similarity=0.188 Sum_probs=51.6
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecC---CCccccc------c------------hhcCCCCceEEEec
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRG---NFYDVRD------L------------RLCGDLGQVLFQPY 73 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~---~~~~~~~------~------------~~~~~~~~~~~~~~ 73 (303)
+...+|+|.|+ |.+|+.++..|.+.|. +++++++. ....... . ......-+++.+..
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~ 97 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE 97 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence 35679999997 8899999999999996 68888776 2111110 0 00000123455555
Q ss_pred CCCCHHHHHHHhcccCEEEEc
Q psy4233 74 HPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 74 Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
++ +.+.+.+.++++|+||.+
T Consensus 98 ~i-~~~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 98 KI-TEENIDKFFKDADIVCEA 117 (200)
T ss_pred eC-CHhHHHHHhcCCCEEEEC
Confidence 65 456677888999999998
No 452
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.46 E-value=0.036 Score=50.09 Aligned_cols=107 Identities=12% Similarity=0.048 Sum_probs=65.3
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccch--------------------hcCCCCc--eEEEec
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLR--------------------LCGDLGQ--VLFQPY 73 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~--------------------~~~~~~~--~~~~~~ 73 (303)
...+|+|+|+ |-+|+.++..|...|. ++++++...-+....-+ +...-+. ++.+..
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 4568999996 9999999999999994 56666543211111000 0000122 444555
Q ss_pred CCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 74 Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
.++ .+...++++++|+||.+... ...-..+-++|.+.++ .+|+.+..+.++
T Consensus 120 ~i~-~~~~~~~~~~~D~Vvd~~d~-------------~~~r~~ln~~~~~~~~-p~v~~~~~g~~G 170 (392)
T PRK07878 120 RLD-PSNAVELFSQYDLILDGTDN-------------FATRYLVNDAAVLAGK-PYVWGSIYRFEG 170 (392)
T ss_pred cCC-hhHHHHHHhcCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 553 44567788999999988632 1112236677888776 677776655544
No 453
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.45 E-value=0.021 Score=49.40 Aligned_cols=93 Identities=17% Similarity=0.118 Sum_probs=54.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCe---EEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQ---IIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~---V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
..++|.| ||||-+|+.+++.|-++++. ++++.....+..+.+...+ ..+++. ++.+. .|+++|+++.
T Consensus 2 ~~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i~f~g--~~~~V~--~l~~~-----~f~~vDia~f 71 (322)
T PRK06901 2 ATLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGIRFNN--KAVEQI--APEEV-----EWADFNYVFF 71 (322)
T ss_pred CcceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEEEECC--EEEEEE--ECCcc-----CcccCCEEEE
Confidence 4568999 99999999999999998854 4455433122212222111 122222 33222 2478999999
Q ss_pred ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233 94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135 (303)
Q Consensus 94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 135 (303)
+|.. ..+.....+.++|+ .+|=-||.
T Consensus 72 -ag~~--------------~s~~~ap~a~~aG~-~VIDnSsa 97 (322)
T PRK06901 72 -AGKM--------------AQAEHLAQAAEAGC-IVIDLYGI 97 (322)
T ss_pred -cCHH--------------HHHHHHHHHHHCCC-EEEECChH
Confidence 7642 12345666777776 44433433
No 454
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.45 E-value=0.045 Score=45.62 Aligned_cols=105 Identities=12% Similarity=0.065 Sum_probs=64.7
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEecCCC
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQPYHPR 76 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~~Dl~ 76 (303)
+|+|.|+ |-+|.++++.|...| .++++++...-+.... +......-+++.+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 5899995 999999999999999 4566665542211100 000000123556667765
Q ss_pred CHHHH-HHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCC
Q psy4233 77 NDDEI-RKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADP 139 (303)
Q Consensus 77 d~~~~-~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 139 (303)
+..++ ...++++|+||.+... +..-..+-+.|...++ .+|..++.+-.+
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~Dn-------------~~aR~~ln~~c~~~~i-plI~~g~~G~~G 129 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALDN-------------IIARRYVNGMLIFLIV-PLIESGTEGFKG 129 (234)
T ss_pred hhhhchHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEcccCCce
Confidence 44333 3567889999988542 2223346677777775 788777665554
No 455
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.45 E-value=0.022 Score=52.87 Aligned_cols=103 Identities=14% Similarity=0.069 Sum_probs=64.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-------------HH---H
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-------------DD---E 80 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-------------~~---~ 80 (303)
.+.+|+|+|+ |-+|...+..+...|.+|+++++++.. .+..+.. +.+++..|..+ .+ .
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~r-le~aesl----GA~~v~i~~~e~~~~~~gya~~~s~~~~~~ 237 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEV-AEQVESM----GAEFLELDFEEEGGSGDGYAKVMSEEFIKA 237 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHc----CCeEEEeccccccccccchhhhcchhHHHH
Confidence 4779999996 999999999999999999999987543 2222222 24433333211 11 1
Q ss_pred ----HHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEec
Q psy4233 81 ----IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISA 134 (303)
Q Consensus 81 ----~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 134 (303)
+.+..+++|+||.+++......+..+ ++..++.++..+ .+|.++.
T Consensus 238 ~~~~~~~~~~gaDVVIetag~pg~~aP~li-------t~~~v~~mkpGg--vIVdvg~ 286 (509)
T PRK09424 238 EMALFAEQAKEVDIIITTALIPGKPAPKLI-------TAEMVASMKPGS--VIVDLAA 286 (509)
T ss_pred HHHHHHhccCCCCEEEECCCCCcccCcchH-------HHHHHHhcCCCC--EEEEEcc
Confidence 12223569999999997543333222 234566666544 5887775
No 456
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.42 E-value=0.036 Score=49.55 Aligned_cols=106 Identities=13% Similarity=0.067 Sum_probs=66.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCccccc----------------------chhcCCCCceEEEe
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRD----------------------LRLCGDLGQVLFQP 72 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~----------------------~~~~~~~~~~~~~~ 72 (303)
+...+|+|+|+ |-+|++++..|...| .++++++...-+.... +......-+++.+.
T Consensus 39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 34668999996 999999999999999 5787776652211110 00000012245555
Q ss_pred cCCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233 73 YHPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137 (303)
Q Consensus 73 ~Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 137 (303)
..+ +.+...++++++|+||.|... +..-..+-++|.+.++ .+|+.+..+-
T Consensus 118 ~~i-~~~~~~~~~~~~DlVid~~Dn-------------~~~r~~in~~~~~~~i-P~v~~~~~g~ 167 (370)
T PRK05600 118 ERL-TAENAVELLNGVDLVLDGSDS-------------FATKFLVADAAEITGT-PLVWGTVLRF 167 (370)
T ss_pred eec-CHHHHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEEEecC
Confidence 555 355677788999999998643 1222245667788776 5666655433
No 457
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=96.41 E-value=0.0088 Score=55.77 Aligned_cols=79 Identities=9% Similarity=-0.022 Sum_probs=48.8
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccch-------hcCCCCceEE-EecCCCCHHHHHHHhcccC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLR-------LCGDLGQVLF-QPYHPRNDDEIRKAIKYSN 89 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-------~~~~~~~~~~-~~~Dl~d~~~~~~~~~~~D 89 (303)
.|+|.|+| +|.+|..++..|++.|++|++.++++........ .......... ..+.+.-.+++.++++++|
T Consensus 4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD 82 (495)
T PRK07531 4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD 82 (495)
T ss_pred cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence 36899998 5999999999999999999999997543221100 0000000000 0011122234556788999
Q ss_pred EEEEcccc
Q psy4233 90 VVINLIGR 97 (303)
Q Consensus 90 ~vi~~a~~ 97 (303)
+||-+...
T Consensus 83 ~Vieavpe 90 (495)
T PRK07531 83 WIQESVPE 90 (495)
T ss_pred EEEEcCcC
Confidence 99987654
No 458
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=96.41 E-value=0.016 Score=50.69 Aligned_cols=97 Identities=21% Similarity=0.253 Sum_probs=59.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCC-HHHHHHHhcccCEEEEccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRN-DDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~D~vi~~a~ 96 (303)
+.+++|+||+|.+|+.+++.+...|.+|++++++... .+.+...+ ...++ |..+ .+.+... .++|++++++|
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~~---~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g 235 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK-LKILKELG---ADYVI--DGSKFSEDVKKL-GGADVVIELVG 235 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHH-HHHHHHcC---CcEEE--ecHHHHHHHHhc-cCCCEEEECCC
Confidence 5689999999999999999999999999999876432 22222111 11122 2211 1222222 36999999987
Q ss_pred cCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233 97 REFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137 (303)
Q Consensus 97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 137 (303)
... ....++.+...+ ++|.+++...
T Consensus 236 ~~~--------------~~~~~~~~~~~g--~~v~~g~~~~ 260 (332)
T cd08259 236 SPT--------------IEESLRSLNKGG--RLVLIGNVTP 260 (332)
T ss_pred hHH--------------HHHHHHHhhcCC--EEEEEcCCCC
Confidence 421 123455554443 6887776543
No 459
>PRK06849 hypothetical protein; Provisional
Probab=96.40 E-value=0.014 Score=52.71 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=33.7
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF 53 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 53 (303)
++|+|||||+...+|..+++.|.+.|++|++++..+.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 4789999999999999999999999999999988643
No 460
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.39 E-value=0.012 Score=56.22 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=68.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG 96 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~ 96 (303)
.++|+|+|. |-+|+.+++.|.++|+++++++.+++ ..+..+. .+...+.+|.+|++.++++ ++++|++|-+..
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~-~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDIS-AVNLMRK----YGYKVYYGDATQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHH-HHHHHHh----CCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence 458999995 99999999999999999999998754 3333332 3578999999999999875 567999887764
Q ss_pred cCccccchhhhhhhcchHHHHHHHHHhcCCc-eEE
Q psy4233 97 REFATKNFTIADANVEIPARLARLSKEMGVE-KFI 130 (303)
Q Consensus 97 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v 130 (303)
.. + ....+++.+++...+ +++
T Consensus 474 d~---------~----~n~~i~~~~r~~~p~~~Ii 495 (601)
T PRK03659 474 EP---------E----DTMKIVELCQQHFPHLHIL 495 (601)
T ss_pred CH---------H----HHHHHHHHHHHHCCCCeEE
Confidence 32 1 122567777776543 443
No 461
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=96.38 E-value=0.016 Score=52.21 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=52.6
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc--ccCEEEEcc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK--YSNVVINLI 95 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~a 95 (303)
||+|+|+ |..|..+++++.+.|++|++++.++....... . -+.+..|..|.+.+.++.+ ++|+|+...
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~------a-d~~~~~~~~d~~~l~~~~~~~~id~v~~~~ 70 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV------A-HRSYVINMLDGDALRAVIEREKPDYIVPEI 70 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh------C-ceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence 6899995 99999999999999999999988754322211 1 2456678889999988877 599998653
No 462
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.38 E-value=0.006 Score=52.07 Aligned_cols=66 Identities=23% Similarity=0.261 Sum_probs=45.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
++|.++| .|-.|+..+..|++.||+|++.+|++.+..+.+...+ . .-.++..++.+++|+||-+..
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~G----a-------~~a~s~~eaa~~aDvVitmv~ 66 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAG----A-------TVAASPAEAAAEADVVITMLP 66 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcC----C-------cccCCHHHHHHhCCEEEEecC
Confidence 4788898 7999999999999999999999998765433332221 1 112222445556677766654
No 463
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.38 E-value=0.0055 Score=52.70 Aligned_cols=71 Identities=15% Similarity=0.155 Sum_probs=47.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC----CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEE
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG----SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVV 91 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 91 (303)
|+.|+|.++| +|.+|+.+++.|++.| ++|++.+|++.+..+.+... .+++.. .+ ..++.+++|+|
T Consensus 1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~---~g~~~~----~~---~~e~~~~aDvV 69 (279)
T PRK07679 1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQK---YGVKGT----HN---KKELLTDANIL 69 (279)
T ss_pred CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHh---cCceEe----CC---HHHHHhcCCEE
Confidence 4457999999 6999999999999987 78999888654333322211 112211 12 23455678999
Q ss_pred EEcccc
Q psy4233 92 INLIGR 97 (303)
Q Consensus 92 i~~a~~ 97 (303)
|.+.-.
T Consensus 70 ilav~p 75 (279)
T PRK07679 70 FLAMKP 75 (279)
T ss_pred EEEeCH
Confidence 888754
No 464
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.36 E-value=0.011 Score=52.70 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=43.8
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
..++|+|+|.+|.+|+.+++.|.+. +++|++.++.... ..+ ..+.++++|+||-|.
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~--------------------~~~---~~~~v~~aDlVilav 59 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG--------------------SLD---PATLLQRADVLIFSA 59 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc--------------------cCC---HHHHhcCCCEEEEeC
Confidence 4679999999999999999999975 7899998874210 012 234567788888887
Q ss_pred cc
Q psy4233 96 GR 97 (303)
Q Consensus 96 ~~ 97 (303)
..
T Consensus 60 Pv 61 (370)
T PRK08818 60 PI 61 (370)
T ss_pred CH
Confidence 64
No 465
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=96.36 E-value=0.025 Score=53.67 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=55.0
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
+++++|+|.|+ |.+|..++.++.+.|++|++++.++......+ --+.+.+|..|.+.+.++.+++|+|...
T Consensus 20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~-------AD~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASSV-------AARHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh-------CceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 56789999997 89999999999999999999988654221111 1235568889999998888889988543
No 466
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.35 E-value=0.0046 Score=53.44 Aligned_cols=35 Identities=23% Similarity=0.156 Sum_probs=31.6
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY 54 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 54 (303)
++|.|+|+ |.+|..++..|++.|++|++.++++..
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~ 36 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQ 36 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHH
Confidence 58999997 999999999999999999999997543
No 467
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.34 E-value=0.03 Score=43.62 Aligned_cols=59 Identities=19% Similarity=0.348 Sum_probs=43.7
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
+..+++++|+|.++.+|..++..|.++|..|+...... .++.+..+++|+||-+
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T--------------------------~~l~~~~~~ADIVVsa 86 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT--------------------------KNLQEITRRADIVVSA 86 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS--------------------------SSHHHHHTTSSEEEE-
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC--------------------------CcccceeeeccEEeee
Confidence 46789999999999999999999999999998865542 1244566789999999
Q ss_pred cccCc
Q psy4233 95 IGREF 99 (303)
Q Consensus 95 a~~~~ 99 (303)
+|...
T Consensus 87 ~G~~~ 91 (160)
T PF02882_consen 87 VGKPN 91 (160)
T ss_dssp SSSTT
T ss_pred ecccc
Confidence 88643
No 468
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=96.34 E-value=0.014 Score=52.13 Aligned_cols=64 Identities=13% Similarity=0.175 Sum_probs=46.9
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
...+++|.|+|. |.||+.+++.|..-|.+|++.++.... .. +.....+++++++++|+|+..
T Consensus 113 ~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~--~~---------------~~~~~~~L~ell~~sDiI~lh 174 (378)
T PRK15438 113 SLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRAD--RG---------------DEGDFRSLDELVQEADILTFH 174 (378)
T ss_pred CcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccc--cc---------------cccccCCHHHHHhhCCEEEEe
Confidence 567899999995 999999999999999999998753211 00 001233577788889988855
Q ss_pred cc
Q psy4233 95 IG 96 (303)
Q Consensus 95 a~ 96 (303)
..
T Consensus 175 ~P 176 (378)
T PRK15438 175 TP 176 (378)
T ss_pred CC
Confidence 44
No 469
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.33 E-value=0.0082 Score=42.43 Aligned_cols=67 Identities=27% Similarity=0.298 Sum_probs=43.0
Q ss_pred EEEEEcCCChhHHHHHHHHHhCC---CeEEEe-ecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQG---SQIIIP-YRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g---~~V~~~-~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
||.|+| +|.+|+++++.|++.| ++|+.. +|++.+..+..+..+ +.... .+..++++.+|+||.+.
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~----~~~~~------~~~~~~~~~advvilav 69 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG----VQATA------DDNEEAAQEADVVILAV 69 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT----TEEES------EEHHHHHHHTSEEEE-S
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc----ccccc------CChHHhhccCCEEEEEE
Confidence 678886 6999999999999999 999966 676443322212211 11111 12445666899999987
Q ss_pred cc
Q psy4233 96 GR 97 (303)
Q Consensus 96 ~~ 97 (303)
-+
T Consensus 70 ~p 71 (96)
T PF03807_consen 70 KP 71 (96)
T ss_dssp -G
T ss_pred CH
Confidence 54
No 470
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=96.31 E-value=0.056 Score=46.12 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=28.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhC-CCeEEEeec
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQ-GSQIIIPYR 50 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~-g~~V~~~~R 50 (303)
|+||.|+|++|.+|+.+++.+.+. +.++.++..
T Consensus 1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d 34 (266)
T TIGR00036 1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE 34 (266)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 369999999999999999999974 688777654
No 471
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.31 E-value=0.016 Score=49.82 Aligned_cols=57 Identities=19% Similarity=0.401 Sum_probs=47.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEee-cCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPY-RGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
++.+++|+|.|-+|.+|..++..|+++|+.|++.. |+. + +.++.+.+|+||-
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~------------------------~---l~e~~~~ADIVIs 207 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR------------------------D---LPAVCRRADILVA 207 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC------------------------C---HHHHHhcCCEEEE
Confidence 46799999999999999999999999999999984 432 1 3556678999998
Q ss_pred ccccC
Q psy4233 94 LIGRE 98 (303)
Q Consensus 94 ~a~~~ 98 (303)
+.+..
T Consensus 208 avg~~ 212 (296)
T PRK14188 208 AVGRP 212 (296)
T ss_pred ecCCh
Confidence 88764
No 472
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=96.31 E-value=0.014 Score=49.65 Aligned_cols=69 Identities=13% Similarity=0.149 Sum_probs=55.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINL 94 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~ 94 (303)
..||++.| +|=+|..++-++.+.|.+|++++|......-... -..+..|..|.+.+..+++. +|+||--
T Consensus 12 a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------hrs~Vi~MlD~~al~avv~rekPd~IVpE 82 (394)
T COG0027 12 ATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------HRSYVIDMLDGDALRAVVEREKPDYIVPE 82 (394)
T ss_pred CeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------hheeeeeccCHHHHHHHHHhhCCCeeeeh
Confidence 45899999 6999999999999999999999998654332221 23466788999999998875 9998844
No 473
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.30 E-value=0.0051 Score=54.02 Aligned_cols=77 Identities=16% Similarity=0.248 Sum_probs=47.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCC----CceEEEecCCCCHHHHHHHhcccCEEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDL----GQVLFQPYHPRNDDEIRKAIKYSNVVIN 93 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~D~vi~ 93 (303)
||+|.|.|+ |.+|..++..|.+.|++|++++|++.. .+.+...+.. ++... ........+..+.++++|+||-
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi~ 77 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQ-AAEINADRENPRYLPGIKL-PDNLRATTDLAEALADADLILV 77 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHH-HHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEEE
Confidence 479999995 999999999999999999999996432 2222211100 00000 0011112234456678999998
Q ss_pred cccc
Q psy4233 94 LIGR 97 (303)
Q Consensus 94 ~a~~ 97 (303)
+...
T Consensus 78 ~v~~ 81 (325)
T PRK00094 78 AVPS 81 (325)
T ss_pred eCCH
Confidence 8764
No 474
>PRK07877 hypothetical protein; Provisional
Probab=96.29 E-value=0.058 Score=52.26 Aligned_cols=103 Identities=10% Similarity=0.128 Sum_probs=67.4
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCC--eEEEeecCCCc--ccccc-------------------hhcCCCCceEEEec
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGS--QIIIPYRGNFY--DVRDL-------------------RLCGDLGQVLFQPY 73 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~--~~~~~-------------------~~~~~~~~~~~~~~ 73 (303)
...+|+|+|+ | +|+.++..|...|. ++++++...-+ +.... ......-+++.+..
T Consensus 106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~ 183 (722)
T PRK07877 106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD 183 (722)
T ss_pred hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4679999999 8 99999999999983 77776554211 11110 00000123566666
Q ss_pred CCCCHHHHHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCc
Q psy4233 74 HPRNDDEIRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALN 136 (303)
Q Consensus 74 Dl~d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 136 (303)
.++ .+.+.++++++|+||.|.-. +..-..+-++|.+.++ .+|+-++..
T Consensus 184 ~i~-~~n~~~~l~~~DlVvD~~D~-------------~~~R~~ln~~a~~~~i-P~i~~~~~~ 231 (722)
T PRK07877 184 GLT-EDNVDAFLDGLDVVVEECDS-------------LDVKVLLREAARARRI-PVLMATSDR 231 (722)
T ss_pred cCC-HHHHHHHhcCCCEEEECCCC-------------HHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence 664 77888999999999999642 2222245678888886 777766543
No 475
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=96.29 E-value=0.011 Score=54.65 Aligned_cols=80 Identities=9% Similarity=0.022 Sum_probs=49.1
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCC--CeEEEeecCCCcccccchhcC---CCCceE-EE---ec-CCCCHHHHHHHhcc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQG--SQIIIPYRGNFYDVRDLRLCG---DLGQVL-FQ---PY-HPRNDDEIRKAIKY 87 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~---~~~~~~-~~---~~-Dl~d~~~~~~~~~~ 87 (303)
||+|.|.| +|++|..++-.|.+.| ++|++++.+... .+.+..-. ..++.+ ++ .+ .+.-..++.+.+++
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~-v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~ 78 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPR-IDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAE 78 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHH-HHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhc
Confidence 57999998 5999999999999885 889999886433 22211100 000100 00 01 12112334556788
Q ss_pred cCEEEEccccCc
Q psy4233 88 SNVVINLIGREF 99 (303)
Q Consensus 88 ~D~vi~~a~~~~ 99 (303)
+|++|-|.+.+.
T Consensus 79 advi~I~V~TP~ 90 (473)
T PLN02353 79 ADIVFVSVNTPT 90 (473)
T ss_pred CCEEEEEeCCCC
Confidence 999999988654
No 476
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.29 E-value=0.016 Score=55.02 Aligned_cols=72 Identities=21% Similarity=0.209 Sum_probs=56.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHH-hcccCEEEEccc
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKA-IKYSNVVINLIG 96 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~a~ 96 (303)
.+|+|+|. |.+|++++++|.++|++|++++.+++. .+..+. .+...+.+|.+|++.++++ ++++|+++-+.+
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~-~~~~~~----~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTR-VDELRE----RGIRAVLGNAANEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHH-HHHHHH----CCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence 47899995 999999999999999999999987533 333332 3588999999999998864 456898876654
No 477
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.29 E-value=0.035 Score=45.75 Aligned_cols=110 Identities=16% Similarity=0.157 Sum_probs=69.9
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCC-------CcccccchhcC-------------CCCceEEEec-C
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGN-------FYDVRDLRLCG-------------DLGQVLFQPY-H 74 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~-------~~~~~~~~~~~-------------~~~~~~~~~~-D 74 (303)
+..+|+|+|. |.+|+..+.+|.+.| .++++++-.. ........-.+ --|..++-.. |
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 4568999996 999999999999999 4565554322 11111111011 0134444443 4
Q ss_pred CCCHHHHHHHhcc-cCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCccCCCCCC
Q psy4233 75 PRNDDEIRKAIKY-SNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNADPNPPT 143 (303)
Q Consensus 75 l~d~~~~~~~~~~-~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~ 143 (303)
+-+++.+.+++.+ +|+||.+.-. +..-..|+..|++.+. ++| ||+++-+..++
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~-------------v~~Kv~Li~~c~~~ki-~vI--ss~Gag~k~DP 161 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDS-------------VRAKVALIAYCRRNKI-PVI--SSMGAGGKLDP 161 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhh-------------hHHHHHHHHHHHHcCC-CEE--eeccccCCCCC
Confidence 5577888887765 9999998642 3334479999999876 444 77777665444
No 478
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.27 E-value=0.0055 Score=52.80 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY 54 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 54 (303)
++++|.|+|+ |.+|..++..|+..|++|+++++++..
T Consensus 2 ~~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~~~ 38 (282)
T PRK05808 2 GIQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISDAA 38 (282)
T ss_pred CccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCHHH
Confidence 4568999996 999999999999999999999887543
No 479
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.26 E-value=0.019 Score=50.18 Aligned_cols=68 Identities=19% Similarity=0.197 Sum_probs=51.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
.+.+++|.|.| .|.||+.+++.|..-|.+|++.+|..... . +++.. ...+++.++++++|+|+.+
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~-~---------~~~~~----~~~~~l~e~l~~aDvvv~~ 197 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW-P---------GVQSF----AGREELSAFLSQTRVLINL 197 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC-C---------Cceee----cccccHHHHHhcCCEEEEC
Confidence 45688999999 69999999999999999999998854321 1 11111 1345788899999999988
Q ss_pred ccc
Q psy4233 95 IGR 97 (303)
Q Consensus 95 a~~ 97 (303)
...
T Consensus 198 lPl 200 (312)
T PRK15469 198 LPN 200 (312)
T ss_pred CCC
Confidence 764
No 480
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.23 E-value=0.012 Score=50.38 Aligned_cols=106 Identities=18% Similarity=0.207 Sum_probs=63.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
.++++++|.|| |..+++++-+|++.| .+++++.|+.....+.......... ..-..+..+.+... ..|.|||+
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~~~~~~~~~~~~~~----~~dliINa 197 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-AVEAAALADLEGLE----EADLLINA 197 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-cccccccccccccc----ccCEEEEC
Confidence 34689999997 899999999999999 6799999976544333222221111 11111122222111 68999999
Q ss_pred cccCcccc-------------chhhhhhhcch-HHHHHHHHHhcCCc
Q psy4233 95 IGREFATK-------------NFTIADANVEI-PARLARLSKEMGVE 127 (303)
Q Consensus 95 a~~~~~~~-------------~~~~~~~n~~~-~~~l~~~~~~~~~~ 127 (303)
.+...... ....++++... .-.+++.|++.|.+
T Consensus 198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~ 244 (283)
T COG0169 198 TPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK 244 (283)
T ss_pred CCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence 87532211 11233444442 33588888888874
No 481
>KOG1202|consensus
Probab=96.23 E-value=0.028 Score=56.02 Aligned_cols=160 Identities=16% Similarity=0.128 Sum_probs=99.3
Q ss_pred CCcccCC-CcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcc---cccchhcCC-CCceEEEecCCCCHHHHHHH
Q psy4233 11 GGRSSFN-GVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYD---VRDLRLCGD-LGQVLFQPYHPRNDDEIRKA 84 (303)
Q Consensus 11 ~~~~~~~-~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~ 84 (303)
.+|+-+. -+..+|+||-|..|-+++..|+.+|. +.++.+|+.-.- ......|.. --++.+-..|++..+.-..+
T Consensus 1760 I~rt~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~L 1839 (2376)
T KOG1202|consen 1760 IPRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGL 1839 (2376)
T ss_pred cchhhcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHH
Confidence 4444443 45799999999999999999999995 455666654221 111112211 11133333455555555555
Q ss_pred hcc------cCEEEEcccc-----Cccccch---hhhhhhcchHHHHHHHHHhcC--CceEEEEecCcc-CCCCCCCCCC
Q psy4233 85 IKY------SNVVINLIGR-----EFATKNF---TIADANVEIPARLARLSKEMG--VEKFIHISALNA-DPNPPTYYIS 147 (303)
Q Consensus 85 ~~~------~D~vi~~a~~-----~~~~~~~---~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~-~~~~~~~~~~ 147 (303)
++. +--|||+|.. ...+.++ +.-+..+.++.+|=+..++.- .+.||.+||.+. .+. .
T Consensus 1840 i~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN------~ 1913 (2376)
T KOG1202|consen 1840 IEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGN------A 1913 (2376)
T ss_pred HHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCC------C
Confidence 543 5678888875 1223332 333445667777777777764 468888888866 343 3
Q ss_pred CCCchhHHHHHHHHHHHhh---CCCEEEEeec
Q psy4233 148 GGSQFYRTKYQGEKEVLRE---FPEATIFRPS 176 (303)
Q Consensus 148 ~~~~y~~~K~~~e~~~~~~---~~~~~ilrp~ 176 (303)
..+.|+.+....|+++..- |+|-+.+.=|
T Consensus 1914 GQtNYG~aNS~MERiceqRr~~GfPG~AiQWG 1945 (2376)
T KOG1202|consen 1914 GQTNYGLANSAMERICEQRRHEGFPGTAIQWG 1945 (2376)
T ss_pred cccccchhhHHHHHHHHHhhhcCCCcceeeee
Confidence 4578999999999999763 6665555443
No 482
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.20 E-value=0.013 Score=50.45 Aligned_cols=78 Identities=19% Similarity=0.166 Sum_probs=50.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCC-eEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGS-QIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
...++++|.|+ |..|+.++.+|.+.|. +|+++.|+..+.............+ .. +...+++...+.++|+||++
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~--~~--~~~~~~~~~~~~~~DiVIna 197 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVI--TR--LEGDSGGLAIEKAAEVLVST 197 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcc--ee--ccchhhhhhcccCCCEEEEC
Confidence 45779999996 9999999999999995 7999999754332221111110111 11 11223344556779999999
Q ss_pred cccC
Q psy4233 95 IGRE 98 (303)
Q Consensus 95 a~~~ 98 (303)
.+..
T Consensus 198 Tp~g 201 (282)
T TIGR01809 198 VPAD 201 (282)
T ss_pred CCCC
Confidence 8764
No 483
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=96.19 E-value=0.054 Score=44.56 Aligned_cols=105 Identities=16% Similarity=0.166 Sum_probs=68.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCccccc-------------chhcCCCCceEEEe---cCCCC--HHH
Q psy4233 19 VVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRD-------------LRLCGDLGQVLFQP---YHPRN--DDE 80 (303)
Q Consensus 19 ~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~~~~~~~---~Dl~d--~~~ 80 (303)
|++.++| -|.+|..+++.|++.||+|++.++++....+. +......|++.++- +|+++ .++
T Consensus 1 M~iGmiG-LGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~~ 79 (300)
T COG1023 1 MQIGMIG-LGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVIDD 79 (300)
T ss_pred Ccceeec-cchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHHHH
Confidence 5778888 69999999999999999999999975432111 11112236666654 45554 355
Q ss_pred HHHHhcccCEEEEccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecCcc
Q psy4233 81 IRKAIKYSNVVINLIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISALNA 137 (303)
Q Consensus 81 ~~~~~~~~D~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~ 137 (303)
+...+..-|+||.-.... +.-+.+-.+.+.+.++ +|+=++|.+.
T Consensus 80 la~~L~~GDivIDGGNS~------------y~Ds~rr~~~l~~kgi-~flD~GTSGG 123 (300)
T COG1023 80 LAPLLSAGDIVIDGGNSN------------YKDSLRRAKLLAEKGI-HFLDVGTSGG 123 (300)
T ss_pred HHhhcCCCCEEEECCccc------------hHHHHHHHHHHHhcCC-eEEeccCCCC
Confidence 666777789998764332 2222345566677787 8887777654
No 484
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.19 E-value=0.03 Score=42.65 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=48.5
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
++.+++|+|.|.+.-+|..++..|.++|..|+...++.. ++.+..+++|+||-.
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~--------------------------~l~~~v~~ADIVvsA 78 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI--------------------------QLQSKVHDADVVVVG 78 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc--------------------------CHHHHHhhCCEEEEe
Confidence 567999999999999999999999999999998865421 244567889999999
Q ss_pred cccC
Q psy4233 95 IGRE 98 (303)
Q Consensus 95 a~~~ 98 (303)
.|..
T Consensus 79 tg~~ 82 (140)
T cd05212 79 SPKP 82 (140)
T ss_pred cCCC
Confidence 8865
No 485
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=96.19 E-value=0.041 Score=50.13 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=55.5
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
..+|+|+|.| -|--|..+++.|.++|++|++.+.++...... ......+++++..+...+ ..+..+|.||-..
T Consensus 5 ~~~~kv~V~G-LG~sG~a~a~~L~~~G~~v~v~D~~~~~~~~~-~~~~~~~~i~~~~g~~~~-----~~~~~~d~vV~SP 77 (448)
T COG0771 5 FQGKKVLVLG-LGKSGLAAARFLLKLGAEVTVSDDRPAPEGLA-AQPLLLEGIEVELGSHDD-----EDLAEFDLVVKSP 77 (448)
T ss_pred ccCCEEEEEe-cccccHHHHHHHHHCCCeEEEEcCCCCccchh-hhhhhccCceeecCccch-----hccccCCEEEECC
Confidence 4588999999 59999999999999999999998665441111 111122457777766544 2345799999999
Q ss_pred ccCcc
Q psy4233 96 GREFA 100 (303)
Q Consensus 96 ~~~~~ 100 (303)
|....
T Consensus 78 Gi~~~ 82 (448)
T COG0771 78 GIPPT 82 (448)
T ss_pred CCCCC
Confidence 87543
No 486
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.19 E-value=0.0093 Score=51.62 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=32.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFY 54 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 54 (303)
.++|.|+|+ |.+|..++..|+..|++|++.++++..
T Consensus 3 i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (291)
T PRK06035 3 IKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEI 38 (291)
T ss_pred CcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 468999996 999999999999999999999987543
No 487
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.19 E-value=0.0043 Score=49.00 Aligned_cols=85 Identities=14% Similarity=0.053 Sum_probs=52.1
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCC-------------------C
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHP-------------------R 76 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl-------------------~ 76 (303)
..+.+|+|+| +|.+|...++.|...|++|+.++...... ..... .....+..+. .
T Consensus 18 ~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~-~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 91 (168)
T PF01262_consen 18 VPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERL-RQLES----LGAYFIEVDYEDHLERKDFDKADYYEHPES 91 (168)
T ss_dssp E-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHH-HHHHH----TTTEESEETTTTTTTSB-CCHHHCHHHCCH
T ss_pred CCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHH-Hhhhc----ccCceEEEcccccccccccchhhhhHHHHH
Confidence 4577999999 59999999999999999999998864322 21111 1122222221 1
Q ss_pred CHHHHHHHhcccCEEEEccccCccccchhh
Q psy4233 77 NDDEIRKAIKYSNVVINLIGREFATKNFTI 106 (303)
Q Consensus 77 d~~~~~~~~~~~D~vi~~a~~~~~~~~~~~ 106 (303)
....+.+.++.+|.||.++-.+....|...
T Consensus 92 ~~~~f~~~i~~~d~vI~~~~~~~~~~P~lv 121 (168)
T PF01262_consen 92 YESNFAEFIAPADIVIGNGLYWGKRAPRLV 121 (168)
T ss_dssp HHHHHHHHHHH-SEEEEHHHBTTSS---SB
T ss_pred hHHHHHHHHhhCcEEeeecccCCCCCCEEE
Confidence 234566667778999988877766666444
No 488
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.18 E-value=0.0051 Score=48.01 Aligned_cols=75 Identities=16% Similarity=0.290 Sum_probs=46.8
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcC----CCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCG----DLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
||.|.|| |-.|.+++..|.++|++|++..|+.. ..+.+.... ..++++.-. .+.-.+++.++++++|+||.+.
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~-~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~Iiiav 77 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEE-QIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAV 77 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHH-HHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHH-HHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEecc
Confidence 7899996 99999999999999999999999752 222222111 012221111 1112244667889999998776
Q ss_pred cc
Q psy4233 96 GR 97 (303)
Q Consensus 96 ~~ 97 (303)
..
T Consensus 78 Ps 79 (157)
T PF01210_consen 78 PS 79 (157)
T ss_dssp -G
T ss_pred cH
Confidence 54
No 489
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.17 E-value=0.0096 Score=51.64 Aligned_cols=66 Identities=15% Similarity=0.218 Sum_probs=45.4
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
+|+|.|+| .|.+|+.+++.|.+.|++|++.+|++... +.+... ++. ..+++.++++++|+||-+..
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~-~~~~~~----g~~-------~~~~~~e~~~~~d~vi~~vp 67 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAV-AEVIAA----GAE-------TASTAKAVAEQCDVIITMLP 67 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHH-HHHHHC----CCe-------ecCCHHHHHhcCCEEEEeCC
Confidence 46899999 59999999999999999999998875332 211111 111 11223445677898888765
No 490
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.17 E-value=0.016 Score=52.03 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=56.2
Q ss_pred CCCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 16 FNGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 16 ~~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
...+++||+|| |-+|.-+++.|.++| .+|+++.|......+.-... .+.....+++...+..+|+||.+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~---------~~~~~~l~el~~~l~~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL---------GAEAVALEELLEALAEADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh---------CCeeecHHHHHHhhhhCCEEEEe
Confidence 45778999997 999999999999999 77888888754333222111 14445667788889999999999
Q ss_pred cccCcc
Q psy4233 95 IGREFA 100 (303)
Q Consensus 95 a~~~~~ 100 (303)
.+...+
T Consensus 246 Tsa~~~ 251 (414)
T COG0373 246 TSAPHP 251 (414)
T ss_pred cCCCcc
Confidence 886544
No 491
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.16 E-value=0.013 Score=51.57 Aligned_cols=66 Identities=15% Similarity=0.220 Sum_probs=49.3
Q ss_pred cCCCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEc
Q psy4233 15 SFNGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINL 94 (303)
Q Consensus 15 ~~~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 94 (303)
.+.+|+|.|+|. |.||+.+++.|...|++|++.+|+...... .+ .-.+++.++++++|+|+.+
T Consensus 143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~---------~~-------~~~~~l~ell~~aDiVil~ 205 (330)
T PRK12480 143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLD---------FL-------TYKDSVKEAIKDADIISLH 205 (330)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhh---------hh-------hccCCHHHHHhcCCEEEEe
Confidence 467889999995 999999999999999999999987532110 01 1123467788999998877
Q ss_pred ccc
Q psy4233 95 IGR 97 (303)
Q Consensus 95 a~~ 97 (303)
...
T Consensus 206 lP~ 208 (330)
T PRK12480 206 VPA 208 (330)
T ss_pred CCC
Confidence 653
No 492
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=96.15 E-value=0.0094 Score=54.37 Aligned_cols=78 Identities=21% Similarity=0.196 Sum_probs=47.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEE-----E-ecCCCCHHHHHHHhcccCE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLF-----Q-PYHPRNDDEIRKAIKYSNV 90 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~-----~-~~Dl~d~~~~~~~~~~~D~ 90 (303)
.+|+|.|+| .|++|..++..|.+ |++|+++++++.. .+.+. .+..+-.|. . .+.+.-... .+.++++|+
T Consensus 5 ~~mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~-ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~-~~~~~~adv 79 (425)
T PRK15182 5 DEVKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKR-ILELK-NGVDVNLETTEEELREARYLKFTSE-IEKIKECNF 79 (425)
T ss_pred CCCeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHH-HHHHH-CcCCCCCCCCHHHHHhhCCeeEEeC-HHHHcCCCE
Confidence 357999998 79999999999776 6999999997543 33322 111100000 0 011110111 124678999
Q ss_pred EEEccccCc
Q psy4233 91 VINLIGREF 99 (303)
Q Consensus 91 vi~~a~~~~ 99 (303)
+|-|.+...
T Consensus 80 vii~Vptp~ 88 (425)
T PRK15182 80 YIITVPTPI 88 (425)
T ss_pred EEEEcCCCC
Confidence 999988653
No 493
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.15 E-value=0.016 Score=49.40 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=42.0
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhC--CCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEcc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQ--GSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLI 95 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a 95 (303)
||+|.|+| .|.+|+.+++.+.+. +.++.++.....+..+.+... .+.. ..+++.+++.++|+|+.|+
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~---~~~~-------~~~~~~ell~~~DvVvi~a 69 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASK---TGAK-------ACLSIDELVEDVDLVVECA 69 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh---cCCe-------eECCHHHHhcCCCEEEEcC
Confidence 47999999 599999999999986 466555443333222221110 0111 1123444557799999997
Q ss_pred cc
Q psy4233 96 GR 97 (303)
Q Consensus 96 ~~ 97 (303)
+.
T Consensus 70 ~~ 71 (265)
T PRK13304 70 SV 71 (265)
T ss_pred Ch
Confidence 64
No 494
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=96.14 E-value=0.31 Score=42.05 Aligned_cols=88 Identities=14% Similarity=0.142 Sum_probs=56.6
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCC--CcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEE
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGN--FYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVIN 93 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~ 93 (303)
..||+|.|.||-+|+.+++.|++-|++++..+... ...... +.-..++.++-.. +|.++-
T Consensus 8 ~~~~~v~~~~~~~g~~~l~~l~~~g~~~v~pVnp~~~~~~v~G----------------~~~y~sv~dlp~~~~~DlAvi 71 (291)
T PRK05678 8 DTKVIVQGITGKQGTFHTEQMLAYGTNIVGGVTPGKGGTTVLG----------------LPVFNTVAEAVEATGANASVI 71 (291)
T ss_pred CCeEEEeCCCchHHHHHHHHHHHCCCCEEEEECCCCCCCeEeC----------------eeccCCHHHHhhccCCCEEEE
Confidence 45899999999999999999999888644333322 111111 1223334444344 898887
Q ss_pred ccccCccccchhhhhhhcchHHHHHHHHHhcCCceEEEEecC
Q psy4233 94 LIGREFATKNFTIADANVEIPARLARLSKEMGVEKFIHISAL 135 (303)
Q Consensus 94 ~a~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 135 (303)
+.... ....+++.|.+.|++.+|.+|+.
T Consensus 72 ~vp~~--------------~v~~~l~e~~~~gvk~avI~s~G 99 (291)
T PRK05678 72 YVPPP--------------FAADAILEAIDAGIDLIVCITEG 99 (291)
T ss_pred EcCHH--------------HHHHHHHHHHHCCCCEEEEECCC
Confidence 76532 12256777777899888877765
No 495
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.12 E-value=0.042 Score=50.82 Aligned_cols=76 Identities=13% Similarity=-0.016 Sum_probs=51.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccc
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIG 96 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~ 96 (303)
.+++|+|+|. |..|..+++.|.+.|++|++.++++..............++.++.++.. ++ .+.++|.||...|
T Consensus 13 ~~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~-~~----~~~~~dlVV~Spg 86 (458)
T PRK01710 13 KNKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENY-LD----KLDGFDVIFKTPS 86 (458)
T ss_pred cCCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCC-hH----HhccCCEEEECCC
Confidence 4679999995 9999999999999999999998865322111000001124666665432 22 2467999999987
Q ss_pred cC
Q psy4233 97 RE 98 (303)
Q Consensus 97 ~~ 98 (303)
..
T Consensus 87 i~ 88 (458)
T PRK01710 87 MR 88 (458)
T ss_pred CC
Confidence 64
No 496
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.11 E-value=0.014 Score=50.95 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=31.3
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCC
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNF 53 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 53 (303)
.++|.|+|+ |.+|..++..|++.|++|++++++..
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~ 38 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEG 38 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 468999996 99999999999999999999998654
No 497
>KOG1198|consensus
Probab=96.11 E-value=0.02 Score=50.65 Aligned_cols=75 Identities=16% Similarity=0.221 Sum_probs=49.2
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCC-CeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhc----ccCEE
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQG-SQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIK----YSNVV 91 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~D~v 91 (303)
.+++|||.||+|-+|+..++.+...| ..|++ +++. +..+..+..+ -.+ ..|..+++..+...+ ++|+|
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t-~~s~-e~~~l~k~lG---Ad~--vvdy~~~~~~e~~kk~~~~~~DvV 229 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVT-ACSK-EKLELVKKLG---ADE--VVDYKDENVVELIKKYTGKGVDVV 229 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEE-Eccc-chHHHHHHcC---CcE--eecCCCHHHHHHHHhhcCCCccEE
Confidence 46799999999999999999999999 45554 4432 2223323222 122 345556554444444 49999
Q ss_pred EEccccC
Q psy4233 92 INLIGRE 98 (303)
Q Consensus 92 i~~a~~~ 98 (303)
++|+|..
T Consensus 230 lD~vg~~ 236 (347)
T KOG1198|consen 230 LDCVGGS 236 (347)
T ss_pred EECCCCC
Confidence 9999874
No 498
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.11 E-value=0.036 Score=51.25 Aligned_cols=78 Identities=15% Similarity=0.182 Sum_probs=54.3
Q ss_pred EEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcccCEEEEccccC
Q psy4233 20 VATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKYSNVVINLIGRE 98 (303)
Q Consensus 20 ~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~a~~~ 98 (303)
+|+|.|+ |-.|...++.|.++|++|.+.+++...............++++..+.-.+.+.+...+.++|.||...|..
T Consensus 2 ~v~viG~-G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~ 79 (459)
T PRK02705 2 IAHVIGL-GRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIP 79 (459)
T ss_pred eEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCC
Confidence 6899995 88999999999999999999988754332210000001246676665445555556677899999988875
No 499
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=96.11 E-value=0.076 Score=44.09 Aligned_cols=93 Identities=14% Similarity=0.089 Sum_probs=61.7
Q ss_pred CcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEecCCCCHHHHHHHhcc--cCEEEEcc
Q psy4233 18 GVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQPYHPRNDDEIRKAIKY--SNVVINLI 95 (303)
Q Consensus 18 ~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vi~~a 95 (303)
+|+|+|.|||+- +..|++.|...+..+++.+-..... +.... . ...+.+-.-+.+.+.+.++. +|.||...
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g~-~l~~~----~-~~~~~~G~l~~e~l~~~l~e~~i~llIDAT 74 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYGA-KLAEQ----I-GPVRVGGFLGAEGLAAFLREEGIDLLIDAT 74 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCccEEEEEcccccc-cchhc----c-CCeeecCcCCHHHHHHHHHHcCCCEEEECC
Confidence 679999999875 8999999999884444433322211 11111 1 12445556788999998875 99999986
Q ss_pred ccCccccchhhhhhhcchHHHHHHHHHhcCCce
Q psy4233 96 GREFATKNFTIADANVEIPARLARLSKEMGVEK 128 (303)
Q Consensus 96 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 128 (303)
-+.. ...+.|.+++|+..|++.
T Consensus 75 HPyA-----------a~iS~Na~~aake~gipy 96 (257)
T COG2099 75 HPYA-----------ARISQNAARAAKETGIPY 96 (257)
T ss_pred ChHH-----------HHHHHHHHHHHHHhCCcE
Confidence 5431 334668888888888743
No 500
>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional
Probab=96.10 E-value=0.059 Score=49.97 Aligned_cols=72 Identities=11% Similarity=-0.043 Sum_probs=48.0
Q ss_pred CCcEEEEEcCCChhHHHHHHHHHhCCCeEEEeecCCCcccccchhcCCCCceEEEe-c------CCCCHHHHHHHhcc--
Q psy4233 17 NGVVATVFGASGYMGSYLCNKLGKQGSQIIIPYRGNFYDVRDLRLCGDLGQVLFQP-Y------HPRNDDEIRKAIKY-- 87 (303)
Q Consensus 17 ~~~~vlVtGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~------Dl~d~~~~~~~~~~-- 87 (303)
+++||||.|+ |.++..+++.+.+.|++++++....+........ . -+.+. + |..|.+.+.++.+.
T Consensus 4 ~~~~vLi~~~-geia~~ii~aa~~lG~~~v~~~s~~d~~~~~~~~----a-D~~~~i~p~~~~~~y~d~~~i~~~a~~~~ 77 (467)
T PRK12833 4 RIRKVLVANR-GEIAVRIIRAARELGMRTVAACSDADRDSLAARM----A-DEAVHIGPSHAAKSYLNPAAILAAARQCG 77 (467)
T ss_pred CCcEEEEECC-cHHHHHHHHHHHHcCCeEEEEECCCCCCChhHHh----C-CEEEecCCCCccccccCHHHHHHHHHHhC
Confidence 3679999995 9999999999999999998875533322111111 1 12221 2 56677777777665
Q ss_pred cCEEEEc
Q psy4233 88 SNVVINL 94 (303)
Q Consensus 88 ~D~vi~~ 94 (303)
+|+|+-.
T Consensus 78 ~daI~pg 84 (467)
T PRK12833 78 ADAIHPG 84 (467)
T ss_pred CCEEEEC
Confidence 6888754
Done!