RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4236
(208 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 63.1 bits (152), Expect = 2e-12
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 88 DSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFL 147
+ G T LH ++ GH V +I + T LH A+ + + L
Sbjct: 261 NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMG---YTPLHVASHYGNIKLVKFLL 317
Query: 148 FF-------SSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLANDTE 200
+ G + LH+AA I +L+ GAS D TP A+A
Sbjct: 318 QHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYIS 377
Query: 201 LAAYLE 206
+ L+
Sbjct: 378 VTDVLK 383
Score = 62.3 bits (150), Expect = 3e-12
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 10/139 (7%)
Query: 74 LKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHK 133
+K+L +G S + +T LH +R GH +V KY++ +N + D QT LH
Sbjct: 16 VKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK--VNAKAKD-DQTPLHC 72
Query: 134 AAMFKRRSICWMFL-------FFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDS 186
AA ++ + L ++ G T LH AA L+ AS
Sbjct: 73 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKG 132
Query: 187 NTPRALALLANDTELAAYL 205
TP +A +A L
Sbjct: 133 FTPLHVAAKYGKVRVAELL 151
Score = 54.6 bits (130), Expect = 1e-09
Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 14/165 (8%)
Query: 36 AARVGDIKMLKDLHSQGYSLKKIPPKDDHP----NLNHFFFQLKDLHSQGYSLLSIDSVG 91
AA+ G +++ + L + P ++ +K L +G S S G
Sbjct: 139 AAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNG 198
Query: 92 QTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFF-- 149
T LH ++ +V + ++ S ++ +G T LH AA + + L
Sbjct: 199 YTPLHIAAKQNQVEVARSLLQYGGS---ANAESVQGVTPLHLAAQEGHAEMVALLLSKQA 255
Query: 150 -----SSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTP 189
+ G T LH A + +L+ G + TP
Sbjct: 256 NGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP 300
Score = 53.1 bits (126), Expect = 5e-09
Identities = 24/113 (21%), Positives = 34/113 (30%), Gaps = 29/113 (25%)
Query: 93 TALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFSSR 152
T LH S GH +VK ++ S N+ +
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGAS--PNVSNVK--------------------------- 32
Query: 153 GQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLANDTELAAYL 205
+T LH AA + L+ A + K D TP A T + L
Sbjct: 33 VETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLL 85
Score = 52.7 bits (125), Expect = 5e-09
Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 10/139 (7%)
Query: 74 LKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHK 133
+ L + + G T LH + + D+VK ++ S + + G T LH
Sbjct: 148 AELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS--PHSPAWN-GYTPLHI 204
Query: 134 AAMFKRRSICWMFL-------FFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDS 186
AA + + L S +G T LH AA + +L++ A+ + +
Sbjct: 205 AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG 264
Query: 187 NTPRALALLANDTELAAYL 205
TP L +A L
Sbjct: 265 LTPLHLVAQEGHVPVADVL 283
Score = 49.2 bits (116), Expect = 1e-07
Identities = 39/178 (21%), Positives = 58/178 (32%), Gaps = 14/178 (7%)
Query: 36 AARVGDIKMLKDLHSQGYSLKKIPPKDDHPNLN----HFFFQLKDLHSQGYSLLSIDSVG 91
AAR+G M+K L + P + L + S + G
Sbjct: 73 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKG 132
Query: 92 QTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFL---- 147
T LH ++YG V + ++ N + G T LH A I + L
Sbjct: 133 FTPLHVAAKYGKVRVAELLLERDAH--PNAAGKN-GLTPLHVAVHHNNLDIVKLLLPRGG 189
Query: 148 ---FFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLANDTELA 202
+ G T LH AA + + L+ G S + TP LA E+
Sbjct: 190 SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV 247
Score = 48.0 bits (113), Expect = 2e-07
Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 7/122 (5%)
Query: 36 AARVGDIKMLKDLHSQGYSLKKIPPKDDHP----NLNHFFFQLKDLHSQGYSLLSIDSVG 91
A+ G + + L G + P + +K L + + +G
Sbjct: 271 VAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLG 330
Query: 92 QTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFSS 151
+ LH ++ GH D+V ++ S N +D G T L A S+ + +
Sbjct: 331 YSPLHQAAQQGHTDIVTLLLKNGAS--PNEVSSD-GTTPLAIAKRLGYISVTDVLKVVTD 387
Query: 152 RG 153
Sbjct: 388 ET 389
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 60.1 bits (144), Expect = 9e-12
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 87 IDSVGQTALHYGSRYGHKDVVKYII-ACAPSSILNMQDNDKGQTALHKAA-------MFK 138
+ G TALH + H+ + +++ A L++Q++ GQTALH AA + K
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL-GQTALHLAAILGEASTVEK 63
Query: 139 RRSICWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLAND 198
+ L G TALH A + + C+L+ S D+ ++ +
Sbjct: 64 LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123
Query: 199 TELAAYLE 206
+ A ++
Sbjct: 124 SHAPAAVD 131
Score = 39.7 bits (91), Expect = 1e-04
Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 5/123 (4%)
Query: 88 DSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQD-----NDKGQTALHKAAMFKRRSI 142
D+ A + D + + R +
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG 181
Query: 143 CWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLANDTELA 202
+ + G+T LH A + S+ +L+ GA T + Y TP ALL + LA
Sbjct: 182 ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241
Query: 203 AYL 205
L
Sbjct: 242 RLL 244
Score = 36.2 bits (82), Expect = 0.002
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 74 LKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIA 112
L+ L G + G+T L + + + + A
Sbjct: 208 LELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246
Score = 30.1 bits (66), Expect = 0.16
Identities = 12/86 (13%), Positives = 22/86 (25%), Gaps = 29/86 (33%)
Query: 92 QTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFSS 151
+T LH V++ ++ +
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGAD--PTARMYG-------------------------- 224
Query: 152 RGQTALHKAAMFKRRSICCMLVAGGA 177
G+T L A + + +L A GA
Sbjct: 225 -GRTPLGSALLRPNPILARLLRAHGA 249
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 59.2 bits (142), Expect = 3e-11
Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 12/129 (9%)
Query: 88 DSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFL 147
G TAL + GH +V+K ++ + + N DN +H + +
Sbjct: 145 RKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITH 203
Query: 148 FFSSRG----------QTALHKAAMFKRRSICCMLV-AGGASLTVKDYDSNTPRALALLA 196
G +T L A K + L+ + D D T LA+
Sbjct: 204 LLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 263
Query: 197 NDTELAAYL 205
++A L
Sbjct: 264 KLKKIAELL 272
Score = 53.0 bits (126), Expect = 3e-09
Identities = 31/157 (19%), Positives = 46/157 (29%), Gaps = 37/157 (23%)
Query: 36 AARVGDIKMLKDLHSQGYSLKKIPPKDDHPNLNHFFFQL---------KDLHSQGYSLLS 86
AA G +++LK L + + L H L G +
Sbjct: 155 AAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV 214
Query: 87 IDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMF 146
G+T L H +V+ ++ I N D+D
Sbjct: 215 RGERGKTPLILAVEKKHLGLVQRLLEQEHIEI-NDTDSD--------------------- 252
Query: 147 LFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKD 183
G+TAL A K + I +L GAS D
Sbjct: 253 ------GKTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 47.7 bits (112), Expect = 2e-07
Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFS 150
L + D+V+ ++ + +N Q+ + G T LH A R I + L
Sbjct: 5 DNHLLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62
Query: 151 SRGQTALHKAAMFKRRSICCM 171
+ A +
Sbjct: 63 ADPVLRKKNGATPFLLAAIAG 83
Score = 38.8 bits (89), Expect = 2e-04
Identities = 22/147 (14%), Positives = 46/147 (31%), Gaps = 15/147 (10%)
Query: 74 LKDLHSQGYSLLSIDSV-GQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTAL- 131
++ L G ++ + G T LH + +D+V+ ++ +L ++
Sbjct: 21 VQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAA 80
Query: 132 ---HKAAMFKRRSICWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDY---- 184
+ S G TA +AA++ + L GA++ ++
Sbjct: 81 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED 140
Query: 185 ------DSNTPRALALLANDTELAAYL 205
T A E+ L
Sbjct: 141 QERLRKGGATALMDAAEKGHVEVLKIL 167
Score = 28.0 bits (61), Expect = 0.89
Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 150 SSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDS-NTPRALALLANDTELAAY 204
+ L KA + + L+ GGA++ ++ + TP A+ + ++
Sbjct: 2 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVEL 57
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 56.5 bits (135), Expect = 2e-10
Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 64 HPNLNHFFFQLKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQD 123
+K L +G + +++ G T LHY + ++ ++ + + +D
Sbjct: 76 IAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN--PDAKD 133
Query: 124 NDKGQTALHKAAMFKRRSICWMFLFF-------SSRGQTALHKAAMFKRRSICCMLVAGG 176
+ TA+H+AA + + L++ + G T LH A +R +LV+ G
Sbjct: 134 HY-EATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQG 192
Query: 177 ASLTVKDYDSNTPRALA 193
AS+ +++ + TP +A
Sbjct: 193 ASIYIENKEEKTPLQVA 209
Score = 48.4 bits (114), Expect = 1e-07
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 10/120 (8%)
Query: 77 LHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAM 136
+ + D +TALH+ GH ++V++++ +D G + LH AA
Sbjct: 23 ILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP---VNDKDDAGWSPLHIAAS 79
Query: 137 FKRRSICWMFLFF-------SSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTP 189
R I L + G T LH AA R I ML+ GGA+ KD+ T
Sbjct: 80 AGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATA 139
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 50.1 bits (118), Expect = 3e-08
Identities = 26/120 (21%), Positives = 39/120 (32%), Gaps = 8/120 (6%)
Query: 96 HYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFF------ 149
V K + + KG+TALH AA I +
Sbjct: 156 RDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD 215
Query: 150 --SSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLANDTELAAYLEK 207
G+T + AA R + L+ GAS+ D +T R LA N + ++
Sbjct: 216 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275
Score = 47.4 bits (111), Expect = 2e-07
Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Query: 60 PKDDHPNLNHFFFQLKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSIL 119
+++ + +G + D G+T + ++ G +VV Y+I S +
Sbjct: 190 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS--V 247
Query: 120 NMQDNDKGQTALHKAAMFKRRSICWMFL 147
D TA A +I +F
Sbjct: 248 EAVDAT-DHTARQLAQANNHHNIVDIFD 274
Score = 41.3 bits (95), Expect = 4e-05
Identities = 12/87 (13%), Positives = 26/87 (29%), Gaps = 7/87 (8%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPSSIL------NMQDNDKGQTALHKAAMFKRRSICW 144
+T LH+ + + + +I + N D D T L A + +RR +
Sbjct: 33 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCD-ENTPLMLAVLARRRRLVA 91
Query: 145 MFLFFSSRGQTALHKAAMFKRRSICCM 171
+ + ++
Sbjct: 92 YLMKAGADPTIYNKSERSALHQAAANR 118
Score = 38.6 bits (88), Expect = 2e-04
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 77 LHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIAC 113
L QG S+ ++D+ TA H ++V C
Sbjct: 240 LIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 276
Score = 35.9 bits (81), Expect = 0.002
Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 23/99 (23%)
Query: 92 QTALH-YGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFS 150
++ + + G + + I +N+ D +T LH A +
Sbjct: 1 ESPIKLHTEAAGSYAITEPIT----RESVNIIDPRHNRTVLHWIASNSSAEKSEDLI--- 53
Query: 151 SRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTP 189
+A GA + D D NTP
Sbjct: 54 ---------------VHEAKECIAAGADVNAMDCDENTP 77
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 49.5 bits (117), Expect = 6e-08
Identities = 27/210 (12%), Positives = 55/210 (26%), Gaps = 21/210 (10%)
Query: 1 MNTSGTYLIHVGLPSSKHYLDIINILEKTSEGVLKAARVGDIKMLKDLHS---QGYSLKK 57
M S IH+ LP +K+ + +L + ++ D H + +
Sbjct: 40 MTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNR----NAKQLWSDAHKKGIKSEVICF 95
Query: 58 IPPKDDHPNLNHFFFQLKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSS 117
+ + L L + + I + A + GH V+ + AP+
Sbjct: 96 VAAITGCSSALDT---LCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE 152
Query: 118 ILNMQDNDKGQTALHKAAMFKRRSICWMFL----------FFSSRGQTALHKAAMFKRRS 167
I+ M + A AA + + A +
Sbjct: 153 IMAMIQAE-NYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 211
Query: 168 ICCMLVAGGASLTVKDYDSNTPRALALLAN 197
+ L+ L + +
Sbjct: 212 VINFLLDCPVMLAYAEIHEFEYGEKYVNPF 241
Score = 38.7 bits (89), Expect = 3e-04
Identities = 23/176 (13%), Positives = 46/176 (26%), Gaps = 13/176 (7%)
Query: 36 AARVGD---IKMLKDLHSQGYSLKKIPPKDDHP----NLNHFFFQLKDLHSQG--YSLLS 86
AA G + L L + +K I ++ N L L +
Sbjct: 97 AAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM 156
Query: 87 IDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMF 146
I + A + GH V+ + AP+ M + A ++
Sbjct: 157 IQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 216
Query: 147 LFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLANDTELA 202
L A + + + + + + + L+ +L
Sbjct: 217 LDCPVMLAYAEIHEFEYGEKYVNPFIARHVN----RLKEMHDAFKLSNPDGVFDLV 268
Score = 36.4 bits (83), Expect = 0.002
Identities = 7/56 (12%), Positives = 15/56 (26%), Gaps = 4/56 (7%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPSSIL---NMQDNDKGQTALHKAAMFKRRSIC 143
L + D ++++++ L D L A + C
Sbjct: 279 MLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGD-ANELLRLALRLGNQGAC 333
Score = 32.2 bits (72), Expect = 0.035
Identities = 17/179 (9%), Positives = 32/179 (17%), Gaps = 32/179 (17%)
Query: 7 YLIHVGLPSSKHYLDIINILEKTSEGVLKAARVGDIKMLKDLHSQGYSLKKIPPKDDHPN 66
L + + + N A G ++ L L + H
Sbjct: 179 RLCELAPTEATAMIQAENYYAFRW----AAVGRGHHNVINFLLDCPVMLAY---AEIHEF 231
Query: 67 LNHFFFQLKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDK 126
+ + + A + G D+V
Sbjct: 232 EYGEKYVNPFIARHV----NRLKEMHDAFKLSNPDGVFDLVTKSEC---------LQGFY 278
Query: 127 GQTALHKAAMFKRRSICWMFL------------FFSSRGQTALHKAAMFKRRSICCMLV 173
L + L L A + C +L+
Sbjct: 279 MLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLL 337
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 48.5 bits (114), Expect = 1e-07
Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 28/182 (15%)
Query: 36 AARVGDIKMLKDLHSQGYSLKKIPPKDDHPNLNHFFFQL--------KDLHSQGYSLLSI 87
+ +++++K L G + + + L L+
Sbjct: 114 LTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE 173
Query: 88 DSVGQTALHY----GSRYGHKDVVKYIIACAPSSIL------NMQDNDKGQTALHKAAMF 137
DS+ +T LH+ G KY + I+ ++ ++ +
Sbjct: 174 DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGE 233
Query: 138 KRRSICWMFLFFS----------SRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSN 187
++ SI S G T L+ AA SI L+ GA + +
Sbjct: 234 RKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL 293
Query: 188 TP 189
P
Sbjct: 294 RP 295
Score = 44.3 bits (103), Expect = 3e-06
Identities = 19/143 (13%), Positives = 38/143 (26%), Gaps = 27/143 (18%)
Query: 87 IDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMF 146
+D G T LH+ + + ++VK+++ + DN ++ L KA F
Sbjct: 103 VDEHGNTPLHWLTSIANLELVKHLVKHGSN--RLYGDNMG-ESCLVKAVKSVNNYDSGTF 159
Query: 147 LFF-----------SSRGQTALHKAAMFKRRSICCMLV-------------AGGASLTVK 182
S +T LH + + C +
Sbjct: 160 EALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSG 219
Query: 183 DYDSNTPRALALLANDTELAAYL 205
+ + + L
Sbjct: 220 TNEKESKPNDKNGERKDSILENL 242
Score = 44.3 bits (103), Expect = 3e-06
Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 88 DSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAA 135
DS G T L+ +R G+ +V ++ + + G + A
Sbjct: 256 DSNGDTCLNIAARLGNISIVDALLDYGAD--PFIANKS-GLRPVDFGA 300
Score = 32.3 bits (72), Expect = 0.030
Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 11/93 (11%)
Query: 119 LNMQDNDKGQTALHKAAMFKRRSICWMFL-------FFSSRGQTALHKAAMF----KRRS 167
LN+ ++ G T LH + + + + G++ L KA +
Sbjct: 99 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGT 158
Query: 168 ICCMLVAGGASLTVKDYDSNTPRALALLANDTE 200
+L L ++D + T ++ +
Sbjct: 159 FEALLDYLYPCLILEDSMNRTILHHIIITSGMT 191
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 46.8 bits (109), Expect = 4e-07
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPSSI--LNMQDNDKGQTALHKAAMFKRRSICWMF 146
G T LH G+ V ++ L++ +N QT LH A + S+ +
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNL-RQTPLHLAVITTLPSVVRLL 59
Score = 37.5 bits (85), Expect = 5e-04
Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 9/146 (6%)
Query: 63 DHPNLNHFFFQLKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQ 122
+H + L L + + G TALH ++ V+ ++
Sbjct: 82 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDI 141
Query: 123 DNDKGQTALHKAAMFKRRSIC-------WMFLFFSSRGQTALHKAAMFKRRSICCMLVAG 175
+ + L A S+ G +ALH A+ + LV
Sbjct: 142 KSGRSP--LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS 199
Query: 176 GASLTVKDYDSNTPRALALLANDTEL 201
GA ++K+ ++TP +A ++
Sbjct: 200 GADSSLKNCHNDTPLMVARSRRVIDI 225
Score = 34.1 bits (76), Expect = 0.008
Identities = 5/32 (15%), Positives = 9/32 (28%)
Query: 77 LHSQGYSLLSIDSVGQTALHYGSRYGHKDVVK 108
L G + T L D+++
Sbjct: 196 LVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 32.1 bits (71), Expect = 0.033
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Query: 153 GQTALHKAAMFKRRSICCMLV----AGGASLTVKDYDSNTPRALA 193
G T LH A + LV GG L + + TP LA
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA 47
Score = 28.7 bits (62), Expect = 0.51
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 11/58 (18%)
Query: 125 DKGQTALHKAAMFKRRSICWMFL-----------FFSSRGQTALHKAAMFKRRSICCM 171
+ G T LH A + + +++ QT LH A + S+ +
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRL 58
Score = 25.2 bits (53), Expect = 6.1
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 8/112 (7%)
Query: 74 LKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQD--------ND 125
+ G L +++ QT LH VV+ ++ S + + +
Sbjct: 23 VNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE 82
Query: 126 KGQTALHKAAMFKRRSICWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGA 177
+A + + G TALH A + + +L+ GA
Sbjct: 83 HRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGA 134
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 47.0 bits (110), Expect = 5e-07
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 29/136 (21%)
Query: 58 IPPKDDHPNLNHFFFQLKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSS 117
I + L+S + + G TALH + G+ +V+K +I
Sbjct: 166 IEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD- 224
Query: 118 ILNMQDNDKGQTALHKAAMFKRRSICWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGA 177
+N++D D G T LH AA + + C +LV
Sbjct: 225 -VNIKDYD---------------------------GWTPLHAAAHWGKEEACRILVENLC 256
Query: 178 SLTVKDYDSNTPRALA 193
+ + T +A
Sbjct: 257 DMEAVNKVGQTAFDVA 272
Score = 41.6 bits (96), Expect = 3e-05
Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAA 135
G T LH + +G ++ + ++ + + GQTA A
Sbjct: 232 GWTPLHAAAHWGKEEACRILVENLCD--MEAVNKV-GQTAFDVAD 273
Score = 40.9 bits (94), Expect = 5e-05
Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 2/142 (1%)
Query: 64 HPNLNHFFFQLKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQD 123
+ + L SQG + +++S G T L +++++ +
Sbjct: 112 AAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE--VNRQGVDIEAA 169
Query: 124 NDKGQTALHKAAMFKRRSICWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKD 183
+ + + + A S + + G TALH AA + +L+ + +KD
Sbjct: 170 RKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229
Query: 184 YDSNTPRALALLANDTELAAYL 205
YD TP A E L
Sbjct: 230 YDGWTPLHAAAHWGKEEACRIL 251
Score = 37.0 bits (84), Expect = 0.001
Identities = 11/81 (13%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFS 150
G + V ++ +N + D G TALH+A + + +
Sbjct: 40 DGAVFLAACSSGDTEEVLRLLERGAD--INYANVD-GLTALHQACIDDNVDMVKFLVENG 96
Query: 151 SRGQTALHKAAMFKRRSICCM 171
+ ++ + + C
Sbjct: 97 ANINQPDNEGWIPLHAAASCG 117
Score = 29.3 bits (64), Expect = 0.30
Identities = 7/52 (13%), Positives = 16/52 (30%)
Query: 153 GQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLANDTELAAY 204
A L+ GA + + D T A + ++ ++ +
Sbjct: 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKF 91
Score = 25.8 bits (55), Expect = 4.6
Identities = 11/73 (15%), Positives = 22/73 (30%)
Query: 74 LKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHK 133
+ L +G + + G TALH + D+VK+++ + + A
Sbjct: 56 VLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115
Query: 134 AAMFKRRSICWMF 146
Sbjct: 116 CGYLDIAEYLISQ 128
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 46.4 bits (108), Expect = 5e-07
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPS--SILNMQDNDKGQTALHKAAMFKRRSICWMFLF 148
G + LH + K + +I + LN Q+N QT LH A + + I L
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNL-QQTPLHLAVITNQPEIAEALLG 60
Query: 149 FSSRGQTALHKAAMFKRRSICCM 171
+ + +
Sbjct: 61 AGCDPELRDFRGNTPLHLACEQG 83
Score = 39.9 bits (91), Expect = 9e-05
Identities = 14/76 (18%), Positives = 24/76 (31%)
Query: 132 HKAAMFKRRSICWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRA 191
+ G+TALH A + + +L+ GA + Y +P
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 183
Query: 192 LALLANDTELAAYLEK 207
L T + L +
Sbjct: 184 LTWGRPSTRIQQQLGQ 199
Score = 33.7 bits (75), Expect = 0.009
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 92 QTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFF-- 149
T LH S +G+ +V+ +++ N G+TALH A + + + L
Sbjct: 112 HTCLHLASIHGYLGIVELLVSLGADVNAQEPCN--GRTALHLAVDLQNPDLVSLLLKCGA 169
Query: 150 -----SSRGQTALHKAAMFKRRSICCMLVAGGAS 178
+ +G + I L
Sbjct: 170 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 32.2 bits (71), Expect = 0.035
Identities = 11/57 (19%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFL 147
G+TALH + D+V ++ C N G + I
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADV--NRVTYQ-GYSPYQLTWGRPSTRIQQQLG 198
Score = 31.4 bits (69), Expect = 0.047
Identities = 1/39 (2%), Positives = 11/39 (28%)
Query: 88 DSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDK 126
G + + + + ++ + +++
Sbjct: 175 TYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESED 213
Score = 31.0 bits (68), Expect = 0.072
Identities = 8/41 (19%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 153 GQTALHKAAMFKRRSICCMLV----AGGASLTVKDYDSNTP 189
G + LH A + + +++ ++ A L ++ TP
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTP 42
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 45.2 bits (105), Expect = 1e-06
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 93 TALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMF 146
LH V+ ++ PS + +D D G+ LH + F+ I
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLL-LQKDQD-GRIPLHWSVSFQAHEITSFL 53
Score = 36.0 bits (81), Expect = 0.001
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 88 DSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAA 135
D G T L + GH D ++ + ++ DN G A A
Sbjct: 169 DKQGWTPLFHALAEGHGDAAVLLVEKYGAEY-DLVDNK-GAKAEDVAL 214
Score = 35.6 bits (80), Expect = 0.003
Identities = 24/174 (13%), Positives = 39/174 (22%), Gaps = 15/174 (8%)
Query: 36 AARVGDIKMLKDLHSQGYSLKKIPPKDDHPNLNHFFFQLKDLHSQGYSLLSIDSVGQTAL 95
+ ++ L S+ ++ DD SL
Sbjct: 41 SVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNK 100
Query: 96 HYGSRYGHKDVVKYIIACAPSSILNMQD------NDKGQTALHKAAMFKRRSICWMFLFF 149
+ S L + Q LH+AA + +
Sbjct: 101 ITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 160
Query: 150 --------SSRGQTALHKAAMFKRRSICCMLV-AGGASLTVKDYDSNTPRALAL 194
+G T L A +LV GA + D +AL
Sbjct: 161 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 214
Score = 31.7 bits (70), Expect = 0.039
Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 9/122 (7%)
Query: 77 LHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYIIA---------CAPSSILNMQDNDKG 127
LHS+ LL D G+ LH+ + ++ ++++ S
Sbjct: 20 LHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 79
Query: 128 QTALHKAAMFKRRSICWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSN 187
L R + +++G T LH A K + L+ GAS+ +KD +
Sbjct: 80 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQ 139
Query: 188 TP 189
P
Sbjct: 140 IP 141
Score = 29.8 bits (65), Expect = 0.17
Identities = 10/46 (21%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 155 TALHKAAMFKRRSIC-CMLVAGGASLTVKDYDSNTPRALALLANDT 199
LH+A M +L + + L KD D P ++
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAH 47
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 44.0 bits (102), Expect = 3e-06
Identities = 29/181 (16%), Positives = 48/181 (26%), Gaps = 11/181 (6%)
Query: 36 AARVGDIKMLKDLHSQGYSLKKIPPKDDHPNLNHF---FFQLKDLHSQGYSLLSIDSVGQ 92
AAR K L G P + + + + +
Sbjct: 30 AARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHD 89
Query: 93 TALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFF--- 149
+ +N DN G+TALH AA + L
Sbjct: 90 GTTPLILAARLAIEGMVEDLITADADINAADNS-GKTALHWAAAVNNTEAVNILLMHHAN 148
Query: 150 ----SSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLANDTELAAYL 205
+ +T L AA L+ A+ + D+ PR +A ++ L
Sbjct: 149 RDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Query: 206 E 206
+
Sbjct: 209 D 209
Score = 41.7 bits (96), Expect = 2e-05
Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 6/122 (4%)
Query: 74 LKDLHSQGYSL-LSIDSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALH 132
+ DL +QG L ++D G+T+LH +R+ D K ++ + A
Sbjct: 5 ISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAV 64
Query: 133 KAAMFKRRSI-----CWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSN 187
A I G T L AA + L+ A + D
Sbjct: 65 AADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGK 124
Query: 188 TP 189
T
Sbjct: 125 TA 126
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 43.0 bits (100), Expect = 4e-06
Identities = 19/151 (12%), Positives = 38/151 (25%), Gaps = 30/151 (19%)
Query: 34 LKAARVGDIKMLKDLHSQGYSLKKIPPKDDHPNLNHFFFQLKDLHSQGYSLLSIDSVGQT 93
+A + DI L ++ G L + P + +T
Sbjct: 11 CEAVKTRDIFGLLQAYADGVDLTEKIPLANG-----------------------HEPDET 47
Query: 94 ALHYGSR---YGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMF---- 146
ALH R +V +++ + + + +
Sbjct: 48 ALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASI 107
Query: 147 LFFSSRGQTALHKAAMFKRRSICCMLVAGGA 177
+ G+T L A K +L +
Sbjct: 108 EIANESGETPLDIAKRLKHEHCEELLTQALS 138
Score = 37.3 bits (85), Expect = 4e-04
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Query: 40 GDIKMLKDLHSQGYSLKKIPPKDDHPNL----NHFFFQLKDLHSQGYSLLSIDSVGQTAL 95
+ ++ L +L K K LK L S+ + G+T L
Sbjct: 59 TSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPL 118
Query: 96 HYGSRYGHKDVVKYIIACAPSSILNMQDNDK 126
R H+ + + A S N + +
Sbjct: 119 DIAKRLKHEHCEELLTQ-ALSGRFNSHVHVE 148
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 38.5 bits (88), Expect = 1e-04
Identities = 26/120 (21%), Positives = 37/120 (30%), Gaps = 7/120 (5%)
Query: 93 TALHYGSRYGHKDVVKYIIACAP----SSILNMQDNDKGQTALHKAAMFKRRSICWMFLF 148
L S G D+V+ II + + A H +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 149 FSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDY-DSNTPRALALLA--NDTELAAYL 205
S G T LH AA +C LV GA++ Y D T T+ + +L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Score = 28.9 bits (63), Expect = 0.27
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Query: 64 HPNLNHFFFQLKDLHSQGYSLLSID-SVGQTA--LHYGSRYGHKDVVKYIIA 112
+ K L G ++ ++ S QTA G+ +++
Sbjct: 73 CAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 124
Score = 28.5 bits (62), Expect = 0.29
Identities = 7/108 (6%), Positives = 24/108 (22%), Gaps = 2/108 (1%)
Query: 34 LKAARVGDIKMLKDLHSQGYSLKKIPPKDDHPNLNHFFFQLKDLHSQGYSLLSIDSVGQT 93
L ++ G+ +++ + + + N ++ + +
Sbjct: 6 LDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS 65
Query: 94 ALHYGSRYGHKDVVKYIIACAPS--SILNMQDNDKGQTALHKAAMFKR 139
+ + + QTA K +
Sbjct: 66 DGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEE 113
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 36.4 bits (82), Expect = 9e-04
Identities = 19/146 (13%), Positives = 41/146 (28%), Gaps = 7/146 (4%)
Query: 34 LKAARVGDIKMLKDLHSQGYSLKKIPPKDDHPNLNHFFFQLKDLHSQGYSLLSIDSVGQT 93
L+AAR G ++ L + G +L + + +S D+ +
Sbjct: 7 LEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV 66
Query: 94 ALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFF---- 149
+ + + TALH A + + + + +
Sbjct: 67 DRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV 126
Query: 150 ---SSRGQTALHKAAMFKRRSICCML 172
S +TA + + +L
Sbjct: 127 HTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 35.6 bits (80), Expect = 0.001
Identities = 21/150 (14%), Positives = 43/150 (28%), Gaps = 36/150 (24%)
Query: 93 TALHYGSRYGHKDVVKYIIAC-APSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFSS 151
L +R G D V+ ++A AP + + + A + + +
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 152 R-----------------------------------GQTALHKAAMFKRRSICCMLVAGG 176
TALH A + + +L+ G
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 177 ASLTVKDYDSNTPRALALLANDTELAAYLE 206
A + + T +++ + +LA L+
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 35.2 bits (79), Expect = 0.002
Identities = 9/48 (18%), Positives = 17/48 (35%)
Query: 64 HPNLNHFFFQLKDLHSQGYSLLSIDSVGQTALHYGSRYGHKDVVKYII 111
H + + + L D+ G T L + G +D+V +
Sbjct: 106 HLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 34.4 bits (77), Expect = 0.004
Identities = 19/148 (12%), Positives = 38/148 (25%), Gaps = 9/148 (6%)
Query: 34 LKAARVGDIKMLKDLHSQGYSLKKIPPKDD--HPNLNHFFFQLKDLHSQGYSLLSIDSVG 91
AA GD++ ++ L + + + F L
Sbjct: 7 SGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDT 66
Query: 92 QTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFS- 150
+ + + +N+ D G +H A ++ S
Sbjct: 67 SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT-GALPIHLAVQEGHTAVVSFLAAESD 125
Query: 151 -----SRGQTALHKAAMFKRRSICCMLV 173
+RG T L A + + +L
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 29.0 bits (63), Expect = 0.30
Identities = 21/154 (13%), Positives = 35/154 (22%), Gaps = 42/154 (27%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFF- 149
L + G V+ ++ + + G+TAL +
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHP-DALNRF-GKTALQVMMFGSTAIALELLKQGA 59
Query: 150 --------------------------------------SSRGQTALHKAAMFKRRSICCM 171
G +H A ++
Sbjct: 60 SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119
Query: 172 LVAGGASLTVKDYDSNTPRALALLANDTELAAYL 205
L A + L +D TP LAL +L L
Sbjct: 120 LAA-ESDLHRRDARGLTPLELALQRGAQDLVDIL 152
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 34.9 bits (78), Expect = 0.002
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACA 114
G+ + GH+DV +Y+ A A
Sbjct: 102 GRLPVDLAEELGHRDVARYLRAAA 125
Score = 34.2 bits (76), Expect = 0.004
Identities = 19/119 (15%), Positives = 34/119 (28%), Gaps = 4/119 (3%)
Query: 91 GQTALHYGSRYGHKDVVKYIIACAPS----SILNMQDNDKGQTALHKAAMFKRRSICWMF 146
L + G + V+ ++ + + + + A
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 147 LFFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDSNTPRALALLANDTELAAYL 205
+ +H AA +L GA L V+D P LA ++A YL
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 34.9 bits (78), Expect = 0.002
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 88 DSVGQTALHYGSRYGHKDVVKYIIA 112
+ G TA YG +VV + A
Sbjct: 130 NHKGDTACDLARLYGRNEVVSLMQA 154
Score = 33.3 bits (74), Expect = 0.009
Identities = 20/149 (13%), Positives = 42/149 (28%), Gaps = 8/149 (5%)
Query: 36 AARVGDIKMLKDLHSQGYSLKKIPPKDDHPNLNHFFFQLKDLHSQGYSLLSIDSVGQTAL 95
AA GD++ L L ++ + + D +T
Sbjct: 8 AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTGF 67
Query: 96 HYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFF------ 149
+ + ++++G LH AA + +
Sbjct: 68 AVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG 127
Query: 150 --SSRGQTALHKAAMFKRRSICCMLVAGG 176
+ +G TA A ++ R + ++ A G
Sbjct: 128 HRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 31.4 bits (69), Expect = 0.040
Identities = 5/79 (6%), Positives = 19/79 (24%), Gaps = 2/79 (2%)
Query: 93 TALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFSSR 152
L + G + + ++ + +N Q+ + + +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVN--VNAQNGFGRTALQVMKLGNPEIARRLLLRGANPD 60
Query: 153 GQTALHKAAMFKRRSICCM 171
+ A + +
Sbjct: 61 LKDRTGFAVIHDAARAGFL 79
Score = 25.2 bits (53), Expect = 4.2
Identities = 4/33 (12%), Positives = 9/33 (27%)
Query: 155 TALHKAAMFKRRSICCMLVAGGASLTVKDYDSN 187
L AA L+ ++ ++
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGR 35
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 30.6 bits (67), Expect = 0.054
Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 4/105 (3%)
Query: 93 TALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFLFFSSR 152
+ + G D VK +A ++ K + + +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63
Query: 153 GQTALHKAAMFKRRS----ICCMLVAGGASLTVKDYDSNTPRALA 193
+ +L++ GA TVK D T
Sbjct: 64 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT 108
Score = 28.3 bits (61), Expect = 0.32
Identities = 14/103 (13%), Positives = 31/103 (30%), Gaps = 1/103 (0%)
Query: 34 LKAARVGDIKMLKDLHSQ-GYSLKKIPPKDDHPNLNHFFFQLKDLHSQGYSLLSIDSVGQ 92
+ A + GD+ +KD ++ + + + QL+ L I++ +
Sbjct: 7 MWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK 66
Query: 93 TALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAA 135
+ ++ V + G TAL
Sbjct: 67 HHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD 109
>d2alea1 d.79.3.1 (A:1-126) Small nuclear
ribonucleoprotein-associated protein 1, Snu13p
{Saccharomyces cerevisiae [TaxId: 4932]}
Length = 126
Score = 26.4 bits (58), Expect = 1.4
Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 4/99 (4%)
Query: 88 DSVGQTALHYGSRYGHKDVVKYIIACAPSSILNMQDNDKGQTALHKAAMFKRRSICWMFL 147
D V Q A + G + K + I+ D + + LH + + +++ ++F+
Sbjct: 22 DVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFV 81
Query: 148 FFSSRGQTALHKAAMFKRRSICCMLVAGGASLTVKDYDS 186
+ AL +A R I + AS +
Sbjct: 82 P----SRVALGRACGVSRPVIAASITTNDASAIKTQIYA 116
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative
beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor
[TaxId: 1902]}
Length = 216
Score = 26.2 bits (56), Expect = 2.8
Identities = 7/61 (11%), Positives = 13/61 (21%)
Query: 121 MQDNDKGQTALHKAAMFKRRSICWMFLFFSSRGQTALHKAAMFKRRSICCMLVAGGASLT 180
A M + G ++ A ++ AG A
Sbjct: 138 FDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP 197
Query: 181 V 181
+
Sbjct: 198 I 198
>d2auaa1 d.166.1.6 (A:2-195) Hypothetical protein BC2332 {Bacillus
cereus [TaxId: 1396]}
Length = 194
Score = 25.6 bits (56), Expect = 3.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 61 KDDHPNLNHFFFQLKDLHSQGYSLLSI 87
K+ H L HFFF+ + L++ G + I
Sbjct: 26 KNQHNTLYHFFFEREQLNANGEDGIQI 52
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
subunit) {Human (Homo sapiens) [TaxId: 9606]}
Length = 473
Score = 25.0 bits (54), Expect = 8.2
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 21 DIINILEKTSEGVLKAARV----GDIKMLKDLHSQGYSLKKIPPKDDHPNLNHFFF 72
+ I+ + + + + + + + D+H Q + L K+ P + F
Sbjct: 47 VALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLF 102
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.134 0.396
Gapped
Lambda K H
0.267 0.0395 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 738,603
Number of extensions: 31729
Number of successful extensions: 256
Number of sequences better than 10.0: 1
Number of HSP's gapped: 162
Number of HSP's successfully gapped: 93
Length of query: 208
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 127
Effective length of database: 1,295,466
Effective search space: 164524182
Effective search space used: 164524182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)