Your job contains 1 sequence.
>psy4237
MSNQMQVRSHISLHHIFKTAVRSASFGPQFIDPIFKHEDIDRIIANNELKNYTDVPVKPP
TSFQTCSTFYNPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERES
IILDPYVIIDKAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPS
EVRFSDNLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHYYFG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4237
(225 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032236 - symbol:mRpS7 "mitochondrial ribosomal pr... 399 3.9e-37 1
ZFIN|ZDB-GENE-050809-112 - symbol:mrps7 "mitochondrial ri... 381 3.1e-35 1
UNIPROTKB|Q6DDY9 - symbol:mrps7 "28S ribosomal protein S7... 379 5.1e-35 1
UNIPROTKB|Q5ZMU0 - symbol:MRPS7 "28S ribosomal protein S7... 376 1.1e-34 1
UNIPROTKB|Q3T040 - symbol:MRPS7 "28S ribosomal protein S7... 366 1.2e-33 1
UNIPROTKB|E2RFN7 - symbol:MRPS7 "Uncharacterized protein"... 366 1.2e-33 1
RGD|1309164 - symbol:Mrps7 "mitochondrial ribosomal prote... 365 1.5e-33 1
MGI|MGI:1354367 - symbol:Mrps7 "mitchondrial ribosomal pr... 363 2.5e-33 1
UNIPROTKB|F1RVX4 - symbol:MRPS7 "Uncharacterized protein"... 359 6.7e-33 1
UNIPROTKB|J3QLS3 - symbol:MRPS7 "28S ribosomal protein S7... 346 1.6e-31 1
UNIPROTKB|Q9Y2R9 - symbol:MRPS7 "28S ribosomal protein S7... 346 1.6e-31 1
WB|WBGene00013324 - symbol:mrps-7 species:6239 "Caenorhab... 328 1.3e-29 1
UNIPROTKB|Q95Q11 - symbol:Y57G11C.34 "28S ribosomal prote... 328 1.3e-29 1
UNIPROTKB|J3QQS1 - symbol:MRPS7 "28S ribosomal protein S7... 327 1.6e-29 1
UNIPROTKB|Q60R52 - symbol:CBG21526 "28S ribosomal protein... 318 1.5e-28 1
UNIPROTKB|J3KSI8 - symbol:MRPS7 "28S ribosomal protein S7... 311 8.2e-28 1
UNIPROTKB|Q9KUZ8 - symbol:rpsG "30S ribosomal protein S7"... 204 1.8e-16 1
TIGR_CMR|VC_0360 - symbol:VC_0360 "ribosomal protein S7" ... 204 1.8e-16 1
UNIPROTKB|P38526 - symbol:rpsG "30S ribosomal protein S7"... 204 1.8e-16 1
TIGR_CMR|CJE_0541 - symbol:CJE_0541 "ribosomal protein S7... 199 6.0e-16 1
TIGR_CMR|CBU_0234 - symbol:CBU_0234 "ribosomal protein S7... 151 6.6e-16 2
TIGR_CMR|GSU_2861 - symbol:GSU_2861 "ribosomal protein S7... 196 1.3e-15 1
UNIPROTKB|J3QKW2 - symbol:MRPS7 "28S ribosomal protein S7... 192 3.3e-15 1
TIGR_CMR|CPS_4766 - symbol:CPS_4766 "ribosomal protein S7... 190 5.4e-15 1
TIGR_CMR|CHY_2314 - symbol:CHY_2314 "ribosomal protein S7... 187 1.1e-14 1
UNIPROTKB|P41194 - symbol:rpsG "30S ribosomal protein S7"... 185 1.8e-14 1
TIGR_CMR|SO_0227 - symbol:SO_0227 "ribosomal protein S7" ... 184 2.3e-14 1
UNIPROTKB|P02359 - symbol:rpsG "30S ribosomal subunit pro... 183 3.0e-14 1
TIGR_CMR|SPO_3500 - symbol:SPO_3500 "ribosomal protein S7... 180 6.2e-14 1
TIGR_CMR|BA_0106 - symbol:BA_0106 "ribosomal protein S7" ... 173 3.4e-13 1
UNIPROTKB|P0C489 - symbol:rps7-A "30S ribosomal protein S... 167 1.5e-12 1
UNIPROTKB|P0C490 - symbol:rps7-A "30S ribosomal protein S... 167 1.5e-12 1
UNIPROTKB|P0C491 - symbol:rps7-A "30S ribosomal protein S... 167 1.5e-12 1
UNIPROTKB|Q6ENC1 - symbol:rps7-A "30S ribosomal protein S... 167 1.5e-12 1
TIGR_CMR|DET_0471 - symbol:DET_0471 "ribosomal protein S7... 157 1.7e-11 1
TIGR_CMR|NSE_0688 - symbol:NSE_0688 "ribosomal protein S7... 145 3.2e-10 1
TIGR_CMR|APH_1034 - symbol:APH_1034 "ribosomal protein S7... 144 4.1e-10 1
TIGR_CMR|ECH_0962 - symbol:ECH_0962 "ribosomal protein S7... 142 6.6e-10 1
TAIR|locus:2828051 - symbol:AT2G07696 species:3702 "Arabi... 118 4.5e-07 1
POMBASE|SPAC16E8.10c - symbol:SPAC16E8.10c "mitochondrial... 127 3.4e-06 1
CGD|CAL0004686 - symbol:orf19.4018 species:5476 "Candida ... 120 2.3e-05 1
UNIPROTKB|Q5AK02 - symbol:RSM7 "Likely mitochondrial ribo... 120 2.3e-05 1
ASPGD|ASPL0000060653 - symbol:AN0470 species:162425 "Emer... 115 0.00021 1
>FB|FBgn0032236 [details] [associations]
symbol:mRpS7 "mitochondrial ribosomal protein S7"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000235 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
EMBL:AE014134 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0005763 GO:GO:0022627 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049 CTD:51081
GeneTree:ENSGT00390000014620 OMA:SKFINMM EMBL:AY075413
RefSeq:NP_523537.1 UniGene:Dm.2743 HSSP:P22744
ProteinModelPortal:Q9VKX4 SMR:Q9VKX4 IntAct:Q9VKX4 MINT:MINT-297714
STRING:Q9VKX4 PaxDb:Q9VKX4 PRIDE:Q9VKX4 EnsemblMetazoa:FBtr0080007
EnsemblMetazoa:FBtr0332194 GeneID:34412 KEGG:dme:Dmel_CG5108
FlyBase:FBgn0032236 InParanoid:Q9VKX4 OrthoDB:EOG463XV0
PhylomeDB:Q9VKX4 GenomeRNAi:34412 NextBio:788374 Bgee:Q9VKX4
Uniprot:Q9VKX4
Length = 218
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 81/206 (39%), Positives = 129/206 (62%)
Query: 19 TAVRSASFGP-QFIDPIF-KHEDIDRIIANNELKNYTDVPVKPPTSFQTCSTFYNPVKEK 76
+ +R S P +++PI K++ +++ N+L VP+K + + + F++ K K
Sbjct: 15 SCLRLMSVYPTHYVEPIVQKYKQLEQ---KNDLSKLYHVPIKAAVNKSSDTIFHDDTKHK 71
Query: 77 FINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENT 136
INY+ KKGN LAR + T++ IKR Q E N A E+ +I +P ++ +A+EN
Sbjct: 72 MINYITKKGNSALARTLLSKTLELIKRTQTEHMNLAKG--EKTTINTNPETLLKQAVENC 129
Query: 137 KPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGA 196
+P+L++ +IKR VTYQVP+PI+ K + F MKW +E A++K +V + LA ++D A
Sbjct: 130 RPLLQVTAIKRGGVTYQVPVPITTKRSYFLAMKWLLEAAREKERKVSLPEKLAWEILDAA 189
Query: 197 DNKGKVVKKKTDLHRQCEANRAYAHY 222
+G+V+K+K DLHR CE+NRAYAHY
Sbjct: 190 HGQGRVIKRKDDLHRLCESNRAYAHY 215
>ZFIN|ZDB-GENE-050809-112 [details] [associations]
symbol:mrps7 "mitochondrial ribosomal protein S7"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR000235
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
ZFIN:ZDB-GENE-050809-112 GO:GO:0005739 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0022627 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049 CTD:51081
HOGENOM:HOG000039065 HOVERGEN:HBG080152 OrthoDB:EOG48D0W5
EMBL:BC100013 IPI:IPI00619171 RefSeq:NP_001028768.1
UniGene:Dr.77424 ProteinModelPortal:Q498Z6 STRING:Q498Z6
GeneID:619204 KEGG:dre:619204 InParanoid:Q498Z6 NextBio:20901461
ArrayExpress:Q498Z6 Uniprot:Q498Z6
Length = 228
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 83/208 (39%), Positives = 123/208 (59%)
Query: 21 VRSASFGPQFIDPIFKHE----DIDRIIANNELKNYTDV-PVKPPTSFQTCSTFYNPVKE 75
+R + + P ++DP + + D + EL+ V P+K + T S F +P+
Sbjct: 19 MRWSRYNPYYLDPEPRKDAPVSDSELSPEQKELQELKTVRPIKAALTGDTSSAFSDPLIS 78
Query: 76 KFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIEN 135
KFIN MM GNK LAR + T+++IKR Q+EKY+K+ + +RE I +PY I +A+EN
Sbjct: 79 KFINMMMYDGNKVLARGIMTQTLETIKRKQVEKYHKSPA-AKREEIECNPYAIFHQAMEN 137
Query: 136 TKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHI-EIAKDKPSEVRFSDNLAQILID 194
KP++ L SI++ YQVP+P++D RF MKW I E +K + L+Q L+
Sbjct: 138 CKPVIGLASIQKGGKFYQVPVPLTDNRRRFMAMKWMITECRTNKQGRTLMYEKLSQELLA 197
Query: 195 GADNKGKVVKKKTDLHRQCEANRAYAHY 222
N+G V+K+K DLH+ EANRAYAHY
Sbjct: 198 AFANEGNVIKRKHDLHKMAEANRAYAHY 225
>UNIPROTKB|Q6DDY9 [details] [associations]
symbol:mrps7 "28S ribosomal protein S7, mitochondrial"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000235 PROSITE:PS00052 Pfam:PF00177 GO:GO:0005739
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0022627
Gene3D:1.10.455.10 InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 CTD:51081 HOVERGEN:HBG080152 HSSP:P17291
EMBL:BC077362 RefSeq:NP_001086729.1 UniGene:Xl.71654
ProteinModelPortal:Q6DDY9 GeneID:446564 KEGG:xla:446564
Xenbase:XB-GENE-6255931 Uniprot:Q6DDY9
Length = 233
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 87/213 (40%), Positives = 123/213 (57%)
Query: 19 TAVRSASFGPQFIDP-----IFKH--EDI-DRIIANNELKNYTDVPVKPPTSFQTCSTFY 70
T VR + + PQ++DP ++ E++ ++ ELK P+K S T S F
Sbjct: 21 TQVRWSRYSPQYLDPETDKQVYSRPLEELSEQERTERELKIVR--PIKAAPSNVTSSVFS 78
Query: 71 NPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIID 130
+P KF N MMK GNK L+R + T++ IKR Q+EKY KA +EER SI +PY I
Sbjct: 79 DPTISKFTNMMMKGGNKNLSRSIMNQTLEQIKRTQLEKYYKAP-EEERASIECNPYTIFH 137
Query: 131 KAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKD-KPSEVRFSDNLA 189
+A+ N +PI+ L SI R +YQVP P+ + RF MKW I +D K + L+
Sbjct: 138 QALHNCQPIIGLTSILRGGKSYQVPTPLKENRRRFLAMKWLITECRDNKHRRTLMYEKLS 197
Query: 190 QILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
Q L+D +G+VVKKK +LH+ EANRA+AH+
Sbjct: 198 QALLDAYQMQGEVVKKKHELHKMAEANRAFAHF 230
>UNIPROTKB|Q5ZMU0 [details] [associations]
symbol:MRPS7 "28S ribosomal protein S7, mitochondrial"
species:9031 "Gallus gallus" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000235 PROSITE:PS00052
Pfam:PF00177 GO:GO:0005739 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0022627 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049 CTD:51081
GeneTree:ENSGT00390000014620 HOGENOM:HOG000039065
HOVERGEN:HBG080152 OrthoDB:EOG48D0W5 EMBL:AJ719294 IPI:IPI00604348
RefSeq:NP_001026280.1 UniGene:Gga.11813 HSSP:P17291
ProteinModelPortal:Q5ZMU0 STRING:Q5ZMU0 Ensembl:ENSGALT00000012988
GeneID:422122 KEGG:gga:422122 InParanoid:Q5ZMU0 NextBio:20824803
Uniprot:Q5ZMU0
Length = 233
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 84/212 (39%), Positives = 126/212 (59%)
Query: 19 TAVRSASFGPQFIDPIFKHEDIDRII--ANNELKNYTDV----PVKP-PTSFQTCSTFYN 71
T VR + + P F++P E + + E K ++ P+K P S + S F +
Sbjct: 21 TQVRWSRYNPSFLEPEVNKELYQKPFNELSEEEKEKQELKAVHPIKAAPPSISS-SVFSD 79
Query: 72 PVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDK 131
P+ KF N MMK GNK LAR + T+++IKR Q+EKY++A D+E+E + +PYVI +
Sbjct: 80 PMISKFTNMMMKDGNKVLARSLMAQTLENIKRKQLEKYHRAP-DDEKERVECNPYVIFHQ 138
Query: 132 AIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHI-EIAKDKPSEVRFSDNLAQ 190
A++N +PI+ L +I R TYQVP+P+ D RF MKW I E ++K + L++
Sbjct: 139 ALKNCQPIIGLSNITRGGKTYQVPVPLKDNRKRFLAMKWLITECRENKHRRTLMPEKLSE 198
Query: 191 ILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
LI +N+G ++KKK LH+ EANRAYAH+
Sbjct: 199 ELIQAFNNEGPIIKKKHVLHKMAEANRAYAHF 230
>UNIPROTKB|Q3T040 [details] [associations]
symbol:MRPS7 "28S ribosomal protein S7, mitochondrial"
species:9913 "Bos taurus" [GO:0006412 "translation" evidence=IDA]
[GO:0003735 "structural constituent of ribosome" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000235 PROSITE:PS00052 Pfam:PF00177
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0022627 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049 EMBL:BC102580
IPI:IPI00694348 RefSeq:NP_001029515.1 UniGene:Bt.48898
ProteinModelPortal:Q3T040 STRING:Q3T040 PRIDE:Q3T040
Ensembl:ENSBTAT00000021471 GeneID:509115 KEGG:bta:509115 CTD:51081
GeneTree:ENSGT00390000014620 HOGENOM:HOG000039065
HOVERGEN:HBG080152 InParanoid:Q3T040 OMA:SKFINMM OrthoDB:EOG48D0W5
NextBio:20868830 Uniprot:Q3T040
Length = 242
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 82/212 (38%), Positives = 126/212 (59%)
Query: 19 TAVRSASFGPQFIDPIFKHEDIDRIIAN-NELKNY------TDVPVKPPTSFQTCSTFYN 71
T VR + +GP++ DP E + +A E + Y T V +K + +T S F +
Sbjct: 30 TQVRWSRYGPEYQDPQIDKEYYRKPLAQLTEEETYERELRKTQV-IKAAPATKTSSVFED 88
Query: 72 PVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDK 131
PV KF N MMK GNK LAR + T++++KR Q EKY+ A S EE+ ++ +PY I +
Sbjct: 89 PVISKFTNMMMKGGNKILARSLMTQTLEAVKRKQFEKYH-AASAEEQATVERNPYTIFHQ 147
Query: 132 AIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHI-EIAKDKPSEVRFSDNLAQ 190
A++N +P++ L I + YQVP+P++++ RF MKW I E + KP + + L+Q
Sbjct: 148 ALKNCEPVIGLVPILKGGHFYQVPVPLAERRRRFLAMKWMITECREKKPRRMLMPEKLSQ 207
Query: 191 ILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L++ N+G V+K+K D+H+ EANRA AHY
Sbjct: 208 ELLEAFCNRGPVIKRKHDMHKMAEANRALAHY 239
>UNIPROTKB|E2RFN7 [details] [associations]
symbol:MRPS7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000235 Pfam:PF00177 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.455.10
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973 CTD:51081
GeneTree:ENSGT00390000014620 OMA:SKFINMM EMBL:AAEX03006299
RefSeq:XP_852008.1 ProteinModelPortal:E2RFN7
Ensembl:ENSCAFT00000007647 GeneID:609623 KEGG:cfa:609623
NextBio:20895212 Uniprot:E2RFN7
Length = 242
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 83/212 (39%), Positives = 126/212 (59%)
Query: 19 TAVRSASFGPQFIDPIFKHEDIDRIIAN-NELKNY------TDVPVKPPTSFQTCSTFYN 71
T VR + +GP++ DP E + +A E + Y T + +K + +T S F +
Sbjct: 30 TQVRWSRYGPEYKDPRIDKEYYRKPLAELTEEEKYEQELRKTQL-IKAAPAAKTSSVFED 88
Query: 72 PVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDK 131
PV KF N MMK GNK LAR + T++++KR Q EKY+ A S EE+ +I +PYVI +
Sbjct: 89 PVISKFTNMMMKGGNKVLARSLMMQTLEAVKRKQFEKYH-AASAEEQATIERNPYVIFHQ 147
Query: 132 AIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSE-VRFSDNLAQ 190
A++N +P++ L I R YQVP+P++D+ RF MKW I+ ++K + + L+
Sbjct: 148 ALQNCEPVIGLVPILRGGHFYQVPVPLADRRRRFLAMKWMIKECREKKHRRMLMPEKLSH 207
Query: 191 ILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L++ N+G V+KKK D+H+ EANRA AHY
Sbjct: 208 ELLEAFHNQGPVIKKKHDMHKMAEANRALAHY 239
>RGD|1309164 [details] [associations]
symbol:Mrps7 "mitochondrial ribosomal protein S7" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006412
"translation" evidence=ISS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] InterPro:IPR000235 PROSITE:PS00052
Pfam:PF00177 RGD:1309164 GO:GO:0005739 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0022627 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049 CTD:51081
GeneTree:ENSGT00390000014620 HOGENOM:HOG000039065
HOVERGEN:HBG080152 OMA:SKFINMM OrthoDB:EOG48D0W5 HSSP:P17291
EMBL:AABR03073537 EMBL:BC088232 IPI:IPI00370337
RefSeq:NP_001093941.1 UniGene:Rn.198901 ProteinModelPortal:Q5I0K8
STRING:Q5I0K8 PRIDE:Q5I0K8 Ensembl:ENSRNOT00000005089 GeneID:113958
KEGG:rno:113958 InParanoid:Q5I0K8 NextBio:618087
Genevestigator:Q5I0K8 Uniprot:Q5I0K8
Length = 242
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 80/212 (37%), Positives = 125/212 (58%)
Query: 19 TAVRSASFGPQFIDPIFKHEDIDRIIAN-NELKNYTDVP------VKPPTSFQTCSTFYN 71
T VR + + P+F DP+ E + ++ E + Y D+ +K + +T S F +
Sbjct: 30 TQVRWSRYAPEFRDPLIDKEHYRKQVSELTEEEKY-DLELKKTQLIKAAAATETSSVFAD 88
Query: 72 PVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDK 131
PV KF N MMK GNK LAR + T++++KR Q EKY +A S EE+ +I +PY I +
Sbjct: 89 PVISKFTNMMMKGGNKVLARSLMAQTLEAVKRKQFEKY-RAASAEEQATIERNPYKIFHE 147
Query: 132 AIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHI-EIAKDKPSEVRFSDNLAQ 190
A+ N +P++ L I + YQVP+P++D+ RF MKW I E ++KP + + L+
Sbjct: 148 ALRNCEPVIGLVPILKGGHFYQVPVPLADRRRRFLAMKWMITECRENKPRRMLMPEKLSH 207
Query: 191 ILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L++ N+G V+K+K ++H+ EANRA AHY
Sbjct: 208 ELLEAFHNRGPVIKRKHNMHKMAEANRALAHY 239
>MGI|MGI:1354367 [details] [associations]
symbol:Mrps7 "mitchondrial ribosomal protein S7"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000235 PROSITE:PS00052 Pfam:PF00177 MGI:MGI:1354367
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0005763
GO:GO:0022627 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049 CTD:51081
GeneTree:ENSGT00390000014620 HOGENOM:HOG000039065
HOVERGEN:HBG080152 OMA:SKFINMM OrthoDB:EOG48D0W5 HSSP:P17291
EMBL:AK009251 EMBL:AK131937 EMBL:AK162024 EMBL:BC049636
IPI:IPI00330688 RefSeq:NP_079581.1 UniGene:Mm.193040
ProteinModelPortal:Q80X85 SMR:Q80X85 STRING:Q80X85
PhosphoSite:Q80X85 PaxDb:Q80X85 PRIDE:Q80X85
Ensembl:ENSMUST00000058109 GeneID:50529 KEGG:mmu:50529
InParanoid:Q80X85 ChiTaRS:MRPS7 NextBio:307538 Bgee:Q80X85
CleanEx:MM_MRPS7 Genevestigator:Q80X85 Uniprot:Q80X85
Length = 242
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 79/211 (37%), Positives = 123/211 (58%)
Query: 19 TAVRSASFGPQFIDPIFKHEDIDRIIAN-NELKNYTDVP-----VKPPTSFQTCSTFYNP 72
T VR + + P+F +P+ E + +A E + Y +K + +T S F +P
Sbjct: 30 TQVRGSRYAPEFREPLIDKEYYRKPVAELTEEEKYDQELKKTQFIKAAAATETSSVFADP 89
Query: 73 VKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKA 132
V KF N MMK GNK LAR + T++++KR Q EKY +A S EE+ +I +PY I +A
Sbjct: 90 VISKFTNMMMKGGNKVLARSLMAQTLEAVKRKQFEKY-RAASAEEQATIERNPYRIFHEA 148
Query: 133 IENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHI-EIAKDKPSEVRFSDNLAQI 191
++N +P++ L I + YQVP+P++D+ RF MKW I E ++KP + L+
Sbjct: 149 LKNCEPVIGLVPILKGGHFYQVPVPLADRRRRFLAMKWMITECRENKPRRTLMPEKLSHE 208
Query: 192 LIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L++ N+G V+K+K ++H+ EANRA AHY
Sbjct: 209 LLEAFHNRGPVIKRKHNMHKMAEANRALAHY 239
>UNIPROTKB|F1RVX4 [details] [associations]
symbol:MRPS7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000235 Pfam:PF00177 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 GeneTree:ENSGT00390000014620
OMA:SKFINMM EMBL:CU928991 RefSeq:XP_003131254.1
Ensembl:ENSSSCT00000018735 GeneID:100525357 KEGG:ssc:100525357
Uniprot:F1RVX4
Length = 242
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 82/211 (38%), Positives = 123/211 (58%)
Query: 19 TAVRSASFGPQFIDPIFKHEDIDRIIANN-ELKNYT-DVP----VKPPTSFQTCSTFYNP 72
T VR + +GP++ DP E + +A E + Y D +K + +T S F +P
Sbjct: 30 TQVRWSRYGPEYKDPQIDKEYYRKPLAEQTEEEKYERDFKKTQLIKAAPATKTSSVFEDP 89
Query: 73 VKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKA 132
V KF N MMK GNK LAR + T++++KR Q KY+ A S EE+ +I +PY I +A
Sbjct: 90 VISKFTNMMMKGGNKVLARSLMTQTLEAVKRKQFAKYH-AASAEEQATIERNPYTIFHQA 148
Query: 133 IENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHI-EIAKDKPSEVRFSDNLAQI 191
++N +P++ L I + YQVP+P++D+ RF MKW I E + K V + L+Q
Sbjct: 149 LKNCEPVIGLVPILKGGHFYQVPVPLADRRRRFLAMKWMIAECREKKHRRVLMPEKLSQE 208
Query: 192 LIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L++ N+G V+K+K D+H+ EANRA AHY
Sbjct: 209 LLEAFHNQGPVIKRKHDMHKMAEANRALAHY 239
>UNIPROTKB|J3QLS3 [details] [associations]
symbol:MRPS7 "28S ribosomal protein S7, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000235
Pfam:PF00177 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC022211 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 HGNC:HGNC:14499
ProteinModelPortal:J3QLS3 Ensembl:ENST00000579002 Uniprot:J3QLS3
Length = 271
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 81/213 (38%), Positives = 122/213 (57%)
Query: 19 TAVRSASFGPQFIDPIFKHE----DIDRIIANN----ELKNYTDVPVKPPTSFQTCSTFY 70
T VR + + P+F DP+ E ++ + ELK T + +K + +T S F
Sbjct: 59 TQVRWSRYSPEFKDPLIDKEYYRKPVEELTEEEKYVRELKK-TQL-IKAAPAGKTSSVFE 116
Query: 71 NPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIID 130
+PV KF N MM GNK LAR + T++++KR Q EKY+ A S EE+ +I +PY I
Sbjct: 117 DPVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYH-AASAEEQATIERNPYTIFH 175
Query: 131 KAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSE-VRFSDNLA 189
+A++N +P++ L I + YQVP+P+ D+ RF MKW I +DK + + L+
Sbjct: 176 QALKNCEPMIGLVPILKGGRFYQVPVPLPDRRRRFLAMKWMITECRDKKHQRTLMPEKLS 235
Query: 190 QILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L++ N+G V+K+K DLH+ EANRA AHY
Sbjct: 236 HKLLEAFHNQGPVIKRKHDLHKMAEANRALAHY 268
>UNIPROTKB|Q9Y2R9 [details] [associations]
symbol:MRPS7 "28S ribosomal protein S7, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000235 PROSITE:PS00052 Pfam:PF00177
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0022627 EMBL:AC022211 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049 CTD:51081
HOGENOM:HOG000039065 HOVERGEN:HBG080152 OMA:SKFINMM
OrthoDB:EOG48D0W5 HSSP:P17291 EMBL:AF077042 EMBL:AK222995
EMBL:AK313854 EMBL:BC000241 IPI:IPI00006440 PIR:JC7165
RefSeq:NP_057055.2 UniGene:Hs.71787 ProteinModelPortal:Q9Y2R9
SMR:Q9Y2R9 IntAct:Q9Y2R9 STRING:Q9Y2R9 PhosphoSite:Q9Y2R9
DMDM:296452884 PaxDb:Q9Y2R9 PRIDE:Q9Y2R9 DNASU:51081
Ensembl:ENST00000245539 GeneID:51081 KEGG:hsa:51081 UCSC:uc002jnm.4
GeneCards:GC17P073254 H-InvDB:HIX0014167 HGNC:HGNC:14499
HPA:HPA022522 HPA:HPA023007 MIM:611974 neXtProt:NX_Q9Y2R9
PharmGKB:PA31026 InParanoid:Q9Y2R9 PhylomeDB:Q9Y2R9
GenomeRNAi:51081 NextBio:53723 ArrayExpress:Q9Y2R9 Bgee:Q9Y2R9
CleanEx:HS_MRPS7 Genevestigator:Q9Y2R9 Uniprot:Q9Y2R9
Length = 242
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 81/213 (38%), Positives = 122/213 (57%)
Query: 19 TAVRSASFGPQFIDPIFKHE----DIDRIIANN----ELKNYTDVPVKPPTSFQTCSTFY 70
T VR + + P+F DP+ E ++ + ELK T + +K + +T S F
Sbjct: 30 TQVRWSRYSPEFKDPLIDKEYYRKPVEELTEEEKYVRELKK-TQL-IKAAPAGKTSSVFE 87
Query: 71 NPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIID 130
+PV KF N MM GNK LAR + T++++KR Q EKY+ A S EE+ +I +PY I
Sbjct: 88 DPVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYH-AASAEEQATIERNPYTIFH 146
Query: 131 KAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSE-VRFSDNLA 189
+A++N +P++ L I + YQVP+P+ D+ RF MKW I +DK + + L+
Sbjct: 147 QALKNCEPMIGLVPILKGGRFYQVPVPLPDRRRRFLAMKWMITECRDKKHQRTLMPEKLS 206
Query: 190 QILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L++ N+G V+K+K DLH+ EANRA AHY
Sbjct: 207 HKLLEAFHNQGPVIKRKHDLHKMAEANRALAHY 239
>WB|WBGene00013324 [details] [associations]
symbol:mrps-7 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000235 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
GO:GO:0005739 GO:GO:0006412 EMBL:Z99281 GO:GO:0003723 GO:GO:0003735
GO:GO:0022627 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049
GeneTree:ENSGT00390000014620 HOGENOM:HOG000039065 OMA:SKFINMM
RefSeq:NP_502782.2 UniGene:Cel.28328 ProteinModelPortal:Q95Q11
SMR:Q95Q11 STRING:Q95Q11 PaxDb:Q95Q11 EnsemblMetazoa:Y57G11C.34
GeneID:190379 KEGG:cel:CELE_Y57G11C.34 UCSC:Y57G11C.34 CTD:190379
WormBase:Y57G11C.34 InParanoid:Q95Q11 NextBio:945590 Uniprot:Q95Q11
Length = 222
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 75/210 (35%), Positives = 121/210 (57%)
Query: 16 IFKTAVRSASFGPQ-FIDPIFKHEDIDRIIANNELKNYTDVPVKPPTSFQTCSTFYNPVK 74
I T S + P+ F DP+ +++ + + +++ +N+ + +K S T + + V
Sbjct: 14 ISSTTSTSNMYDPRVFRDPVTNVQELRKPLDSDDERNF--LFLKAMKSDATPVFYRDHVI 71
Query: 75 EKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIE 134
+K I K G KE +R+ ++ IKR Q + + KA S+EE++SI LDP+++ K I+
Sbjct: 72 DKLIRVCTKDGEKETSRKNVLSALEIIKRRQYKAWAKA-SEEEKKSIELDPFLVAKKGIK 130
Query: 135 NTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAK--DKPSEVRFSDNLAQIL 192
N P++KL+ + R TYQVP PI + EA F+ MK +I + K E F D LA L
Sbjct: 131 NCHPLMKLQGVTRGGTTYQVPFPIEEPEAEFRAMKMMRDICRVRSKHGETHFKDILATEL 190
Query: 193 IDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
+ + N+G ++ K +LH+ CEANRAYAHY
Sbjct: 191 LAASQNEGSTIQAKQELHKTCEANRAYAHY 220
>UNIPROTKB|Q95Q11 [details] [associations]
symbol:Y57G11C.34 "28S ribosomal protein S7, mitochondrial"
species:6239 "Caenorhabditis elegans" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS]
InterPro:IPR000235 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
GO:GO:0005739 GO:GO:0006412 EMBL:Z99281 GO:GO:0003723 GO:GO:0003735
GO:GO:0022627 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049
GeneTree:ENSGT00390000014620 HOGENOM:HOG000039065 OMA:SKFINMM
RefSeq:NP_502782.2 UniGene:Cel.28328 ProteinModelPortal:Q95Q11
SMR:Q95Q11 STRING:Q95Q11 PaxDb:Q95Q11 EnsemblMetazoa:Y57G11C.34
GeneID:190379 KEGG:cel:CELE_Y57G11C.34 UCSC:Y57G11C.34 CTD:190379
WormBase:Y57G11C.34 InParanoid:Q95Q11 NextBio:945590 Uniprot:Q95Q11
Length = 222
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 75/210 (35%), Positives = 121/210 (57%)
Query: 16 IFKTAVRSASFGPQ-FIDPIFKHEDIDRIIANNELKNYTDVPVKPPTSFQTCSTFYNPVK 74
I T S + P+ F DP+ +++ + + +++ +N+ + +K S T + + V
Sbjct: 14 ISSTTSTSNMYDPRVFRDPVTNVQELRKPLDSDDERNF--LFLKAMKSDATPVFYRDHVI 71
Query: 75 EKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIE 134
+K I K G KE +R+ ++ IKR Q + + KA S+EE++SI LDP+++ K I+
Sbjct: 72 DKLIRVCTKDGEKETSRKNVLSALEIIKRRQYKAWAKA-SEEEKKSIELDPFLVAKKGIK 130
Query: 135 NTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAK--DKPSEVRFSDNLAQIL 192
N P++KL+ + R TYQVP PI + EA F+ MK +I + K E F D LA L
Sbjct: 131 NCHPLMKLQGVTRGGTTYQVPFPIEEPEAEFRAMKMMRDICRVRSKHGETHFKDILATEL 190
Query: 193 IDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
+ + N+G ++ K +LH+ CEANRAYAHY
Sbjct: 191 LAASQNEGSTIQAKQELHKTCEANRAYAHY 220
>UNIPROTKB|J3QQS1 [details] [associations]
symbol:MRPS7 "28S ribosomal protein S7, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000235
PIRSF:PIRSF002122 Pfam:PF00177 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AC022211 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 HGNC:HGNC:14499
Ensembl:ENST00000581993 Uniprot:J3QQS1
Length = 172
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 69/167 (41%), Positives = 102/167 (61%)
Query: 57 VKPPTSFQTCSTFYNPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDE 116
+K + +T S F +PV KF N MM GNK LAR + T++++KR Q EKY+ A S E
Sbjct: 4 IKAAPAGKTSSVFEDPVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYH-AASAE 62
Query: 117 ERESIILDPYVIIDKAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAK 176
E+ +I +PY I +A++N +P++ L I + YQVP+P+ D+ RF MKW I +
Sbjct: 63 EQATIERNPYTIFHQALKNCEPMIGLVPILKGGRFYQVPVPLPDRRRRFLAMKWMITECR 122
Query: 177 DKPSE-VRFSDNLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
DK + + L+ L++ N+G V+K+K DLH+ EANRA AHY
Sbjct: 123 DKKHQRTLMPEKLSHKLLEAFHNQGPVIKRKHDLHKMAEANRALAHY 169
>UNIPROTKB|Q60R52 [details] [associations]
symbol:CBG21526 "28S ribosomal protein S7, mitochondrial"
species:6238 "Caenorhabditis briggsae" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000235 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0022627 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049
HOGENOM:HOG000039065 EMBL:HE601157 ProteinModelPortal:Q60R52
STRING:Q60R52 EnsemblMetazoa:CBG21526 WormBase:CBG21526
Uniprot:Q60R52
Length = 222
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/200 (36%), Positives = 116/200 (58%)
Query: 26 FGPQ-FIDPIFKHEDIDRIIANNELKNYTDVPVKPPTSFQTCSTFYNPVKEKFINYMMKK 84
+ P+ F +P+ +++ + + ++ +N+ + +K S T + + V +K I K
Sbjct: 24 YDPRVFREPVSNVQELRKPLDVDDERNF--LFLKAMKSDATPVFYRDSVIDKLIRVCTKD 81
Query: 85 GNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKLRS 144
G KE +R+ ++ IKR Q + + KA +DEE++SI LDP+VI K I+N P++KL+
Sbjct: 82 GEKETSRKNVLSALEIIKRRQYKAWTKA-NDEEKKSIELDPFVIARKGIKNCHPLMKLQG 140
Query: 145 IKRAAVTYQVPIPISDKEARFKCMKWHIEIAK--DKPSEVRFSDNLAQILIDGADNKGKV 202
+ R TYQVP PI + EA F+ MK +I + K E F D LA L+ + N+G
Sbjct: 141 VTRGGTTYQVPFPIEEPEAEFRAMKMMRDICRVRAKHGETHFKDILATELLAASQNEGST 200
Query: 203 VKKKTDLHRQCEANRAYAHY 222
+ K +LH+ CEANRAYAHY
Sbjct: 201 ITAKQELHKTCEANRAYAHY 220
>UNIPROTKB|J3KSI8 [details] [associations]
symbol:MRPS7 "28S ribosomal protein S7, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000235
PIRSF:PIRSF002122 Pfam:PF00177 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AC022211 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 HGNC:HGNC:14499
Ensembl:ENST00000584678 Uniprot:J3KSI8
Length = 156
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 65/153 (42%), Positives = 95/153 (62%)
Query: 71 NPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIID 130
+PV KF N MM GNK LAR + T++++KR Q EKY+ A S EE+ +I +PY I
Sbjct: 2 DPVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYH-AASAEEQATIERNPYTIFH 60
Query: 131 KAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSE-VRFSDNLA 189
+A++N +P++ L I + YQVP+P+ D+ RF MKW I +DK + + L+
Sbjct: 61 QALKNCEPMIGLVPILKGGRFYQVPVPLPDRRRRFLAMKWMITECRDKKHQRTLMPEKLS 120
Query: 190 QILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L++ N+G V+K+K DLH+ EANRA AHY
Sbjct: 121 HKLLEAFHNQGPVIKRKHDLHKMAEANRALAHY 153
>UNIPROTKB|Q9KUZ8 [details] [associations]
symbol:rpsG "30S ribosomal protein S7" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000235 InterPro:IPR005717
InterPro:IPR020606 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10
HAMAP:MF_00480_B InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 TIGRFAMs:TIGR01029 eggNOG:COG0049 KO:K02992
OMA:RREKTMT ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13 PIR:B82332
RefSeq:NP_230014.1 ProteinModelPortal:Q9KUZ8 SMR:Q9KUZ8
PRIDE:Q9KUZ8 DNASU:2615039 GeneID:2615039 KEGG:vch:VC0360
PATRIC:20079793 Uniprot:Q9KUZ8
Length = 156
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 84 KGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKLR 143
K EL + + K+ EK D E D + ++A+EN +P ++++
Sbjct: 17 KFKSELLAKFVNILMVDGKKSTAEKIVYTALDTMAEKSGKDHLAVFEEALENVRPAVEVK 76
Query: 144 SIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGADNKGKVV 203
S + TYQVP+ + M+W +E A+ K E + LA ++D A+NKG V
Sbjct: 77 SRRVGGSTYQVPVEVRPVRRNALAMRWLVEAAR-KRGEKSMAARLAAEMLDAAENKGSAV 135
Query: 204 KKKTDLHRQCEANRAYAHY 222
KK+ D+HR EAN+A+AHY
Sbjct: 136 KKREDVHRMAEANKAFAHY 154
Score = 102 (41.0 bits), Expect = 0.00050, P = 0.00050
Identities = 32/138 (23%), Positives = 61/138 (44%)
Query: 69 FYNPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVI 128
F + + KF+N +M G K A ++ YT EK K D +
Sbjct: 18 FKSELLAKFVNILMVDGKKSTAEKIV-YTALDT---MAEKSGK------------DHLAV 61
Query: 129 IDKAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNL 188
++A+EN +P ++++S + TYQVP+ + M+W +E A+ + + +
Sbjct: 62 FEEALENVRPAVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWLVEAARKRGEKSMAARLA 121
Query: 189 AQILIDGADNKGKVVKKK 206
A++L + V K++
Sbjct: 122 AEMLDAAENKGSAVKKRE 139
>TIGR_CMR|VC_0360 [details] [associations]
symbol:VC_0360 "ribosomal protein S7" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10 HAMAP:MF_00480_B
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973
TIGRFAMs:TIGR01029 eggNOG:COG0049 KO:K02992 OMA:RREKTMT
ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13 PIR:B82332
RefSeq:NP_230014.1 ProteinModelPortal:Q9KUZ8 SMR:Q9KUZ8
PRIDE:Q9KUZ8 DNASU:2615039 GeneID:2615039 KEGG:vch:VC0360
PATRIC:20079793 Uniprot:Q9KUZ8
Length = 156
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 84 KGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKLR 143
K EL + + K+ EK D E D + ++A+EN +P ++++
Sbjct: 17 KFKSELLAKFVNILMVDGKKSTAEKIVYTALDTMAEKSGKDHLAVFEEALENVRPAVEVK 76
Query: 144 SIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGADNKGKVV 203
S + TYQVP+ + M+W +E A+ K E + LA ++D A+NKG V
Sbjct: 77 SRRVGGSTYQVPVEVRPVRRNALAMRWLVEAAR-KRGEKSMAARLAAEMLDAAENKGSAV 135
Query: 204 KKKTDLHRQCEANRAYAHY 222
KK+ D+HR EAN+A+AHY
Sbjct: 136 KKREDVHRMAEANKAFAHY 154
Score = 102 (41.0 bits), Expect = 0.00050, P = 0.00050
Identities = 32/138 (23%), Positives = 61/138 (44%)
Query: 69 FYNPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVI 128
F + + KF+N +M G K A ++ YT EK K D +
Sbjct: 18 FKSELLAKFVNILMVDGKKSTAEKIV-YTALDT---MAEKSGK------------DHLAV 61
Query: 129 IDKAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNL 188
++A+EN +P ++++S + TYQVP+ + M+W +E A+ + + +
Sbjct: 62 FEEALENVRPAVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWLVEAARKRGEKSMAARLA 121
Query: 189 AQILIDGADNKGKVVKKK 206
A++L + V K++
Sbjct: 122 AEMLDAAENKGSAVKKRE 139
>UNIPROTKB|P38526 [details] [associations]
symbol:rpsG "30S ribosomal protein S7" species:243274
"Thermotoga maritima MSB8" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000235 InterPro:IPR005717
InterPro:IPR020606 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
GO:GO:0006412 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
EMBL:AE000512 GenomeReviews:AE000512_GR GO:GO:0015935
Gene3D:1.10.455.10 HAMAP:MF_00480_B InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 TIGRFAMs:TIGR01029 eggNOG:COG0049
KO:K02992 OMA:RREKTMT ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13
EMBL:S57688 PIR:A72244 RefSeq:NP_229304.1 PDB:3GTY PDBsum:3GTY
ProteinModelPortal:P38526 SMR:P38526 IntAct:P38526 DNASU:897994
GeneID:897994 KEGG:tma:TM1504 PATRIC:23937966
EvolutionaryTrace:P38526 Uniprot:P38526
Length = 155
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 43/121 (35%), Positives = 64/121 (52%)
Query: 102 KRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKLRSIKRAAVTYQVPIPISDK 161
K+ +K D RE DP + +A+EN KP+L++R + TYQVPI + +
Sbjct: 34 KKTIAQKIVYGAFDIIREKTKKDPLEVFRQAVENVKPVLEVRPRRVGGATYQVPIEVQEP 93
Query: 162 EARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAH 221
++W +E A+ K + LA+ +I +N G +KKK D HR EANRA+AH
Sbjct: 94 RRTSLALRWIVEAARAKKGRP-MKEKLAEEIIAAYNNTGTAIKKKEDTHRMAEANRAFAH 152
Query: 222 Y 222
Y
Sbjct: 153 Y 153
>TIGR_CMR|CJE_0541 [details] [associations]
symbol:CJE_0541 "ribosomal protein S7" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000235
InterPro:IPR005717 InterPro:IPR020606 PIRSF:PIRSF002122
PROSITE:PS00052 Pfam:PF00177 GO:GO:0006412 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
GO:GO:0015935 Gene3D:1.10.455.10 HAMAP:MF_00480_B
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973
TIGRFAMs:TIGR01029 HOGENOM:HOG000039067 eggNOG:COG0049 KO:K02992
OMA:RREKTMT ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13
RefSeq:YP_178558.1 ProteinModelPortal:Q5HVX7 SMR:Q5HVX7
STRING:Q5HVX7 PRIDE:Q5HVX7 GeneID:3231302 KEGG:cjr:CJE0541
PATRIC:20042804 BioCyc:CJEJ195099:GJC0-556-MONOMER Uniprot:Q5HVX7
Length = 156
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 53/152 (34%), Positives = 80/152 (52%)
Query: 71 NPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIID 130
N V KFIN +M G K A + +++I + E++ I D I +
Sbjct: 19 NKVITKFINSLMYDGKKSTATTIMYGALEAIDK----------KGGEKKGI--D---IFN 63
Query: 131 KAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQ 190
AIEN KP+L+++S + TYQVP+ + + ++W I A+ K SE D LA
Sbjct: 64 DAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIRWIISFAR-KRSERTMIDKLAA 122
Query: 191 ILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L+D A++KG KKK D ++ EAN+A+AHY
Sbjct: 123 ELLDAANSKGASFKKKEDTYKMAEANKAFAHY 154
>TIGR_CMR|CBU_0234 [details] [associations]
symbol:CBU_0234 "ribosomal protein S7" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000235 InterPro:IPR005717
InterPro:IPR020606 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
GO:GO:0006412 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10
HAMAP:MF_00480_B InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 TIGRFAMs:TIGR01029 HOGENOM:HOG000039067
eggNOG:COG0049 KO:K02992 OMA:RREKTMT ProtClustDB:PRK05302
PANTHER:PTHR11205:SF13 RefSeq:NP_819278.1 ProteinModelPortal:Q83ES8
SMR:Q83ES8 PRIDE:Q83ES8 GeneID:1208115 KEGG:cbu:CBU_0234
PATRIC:17929161 BioCyc:CBUR227377:GJ7S-240-MONOMER Uniprot:Q83ES8
Length = 191
Score = 151 (58.2 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 32/109 (29%), Positives = 60/109 (55%)
Query: 114 SDEERESIILDPYVIIDKAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIE 173
+DE ++ L+ + A++ P ++++S + TYQVP+ I + +W +E
Sbjct: 85 TDENARALALETF---KGALDKVMPNVEVKSRRVGGSTYQVPVEIRMARRQALARRWLVE 141
Query: 174 IAKDKPSEVRFSDNLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
A +K +E LA ++D + +G +KK+ D+HR +AN+A+AHY
Sbjct: 142 YA-NKRNEKTMVLRLAHEILDAVEGRGGAIKKREDVHRMAKANQAFAHY 189
Score = 61 (26.5 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 69 FYNPVKEKFINYMMKKGNKELAREVFEYTVKSI-KRIQIEKYNKATSDEE 117
F++ + KFIN +M+ G K +A ++ + + KR+Q + + D E
Sbjct: 18 FHSELLAKFINAVMRNGKKSVAEKIVYGALDVVAKRVQNKSGEQGDGDGE 67
>TIGR_CMR|GSU_2861 [details] [associations]
symbol:GSU_2861 "ribosomal protein S7" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000235
InterPro:IPR005717 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
GO:GO:0006412 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10
HAMAP:MF_00480_B InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 TIGRFAMs:TIGR01029 HOGENOM:HOG000039067
eggNOG:COG0049 KO:K02992 OMA:RREKTMT ProtClustDB:PRK05302
PANTHER:PTHR11205:SF13 RefSeq:NP_953904.1 ProteinModelPortal:Q748Y7
SMR:Q748Y7 GeneID:2688701 KEGG:gsu:GSU2861 PATRIC:22028569
BioCyc:GSUL243231:GH27-2842-MONOMER Uniprot:Q748Y7
Length = 156
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 38/100 (38%), Positives = 62/100 (62%)
Query: 124 DPYVIIDKAIENTKPILKLRSIKRAAVTYQVPIPI-SDKEARFKCMKWHIEIAKDKPSEV 182
+P ++ K ++N KP+L ++S + TYQVP+ + +D+ M+W + A ++ SE
Sbjct: 57 EPVKVLKKCLDNIKPMLGVKSRRVGGSTYQVPVEVRADRRVSL-AMRWLVRYANER-SEK 114
Query: 183 RFSDNLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
+D LA ++D +N+G VKK+ D HR EANRA+AHY
Sbjct: 115 TITDKLAGEILDAYNNRGAAVKKREDTHRMAEANRAFAHY 154
>UNIPROTKB|J3QKW2 [details] [associations]
symbol:MRPS7 "28S ribosomal protein S7, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000235
Pfam:PF00177 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC022211 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 HGNC:HGNC:14499
ProteinModelPortal:J3QKW2 Ensembl:ENST00000579761 Uniprot:J3QKW2
Length = 183
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 52/144 (36%), Positives = 80/144 (55%)
Query: 19 TAVRSASFGPQFIDPIFKHE----DIDRIIANN----ELKNYTDVPVKPPTSFQTCSTFY 70
T VR + + P+F DP+ E ++ + ELK T + +K + +T S F
Sbjct: 30 TQVRWSRYSPEFKDPLIDKEYYRKPVEELTEEEKYVRELKK-TQL-IKAAPAGKTSSVFE 87
Query: 71 NPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIID 130
+PV KF N MM GNK LAR + T++++KR Q EKY+ A S EE+ +I +PY I
Sbjct: 88 DPVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYH-AASAEEQATIERNPYTIFH 146
Query: 131 KAIENTKPILKLRSIKRAAVTYQV 154
+A++N +P++ L I + YQV
Sbjct: 147 QALKNCEPMIGLVPILKGGRFYQV 170
>TIGR_CMR|CPS_4766 [details] [associations]
symbol:CPS_4766 "ribosomal protein S7" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 GO:GO:0006412
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10 HAMAP:MF_00480_B
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973
TIGRFAMs:TIGR01029 HOGENOM:HOG000039067 eggNOG:COG0049 KO:K02992
OMA:RREKTMT ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13
RefSeq:YP_271410.1 ProteinModelPortal:Q47UW2 SMR:Q47UW2
STRING:Q47UW2 PRIDE:Q47UW2 GeneID:3522362 KEGG:cps:CPS_4766
PATRIC:21472349 BioCyc:CPSY167879:GI48-4772-MONOMER Uniprot:Q47UW2
Length = 156
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 41/139 (29%), Positives = 72/139 (51%)
Query: 84 KGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKLR 143
K + EL + + K+ EK D + D + ++A++N +P ++++
Sbjct: 17 KFHNELLAKFINILMVDGKKSTAEKIVYGALDILAQKSEKDQLELFEEALDNIRPSVEVK 76
Query: 144 SIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGADNKGKVV 203
S + TYQVP+ + M+W +E A+ K E + LA ++D +D+KG V
Sbjct: 77 SRRVGGSTYQVPVEVRPVRRNALAMRWLVEAAR-KRGEKSMAQRLANEMLDASDSKGSAV 135
Query: 204 KKKTDLHRQCEANRAYAHY 222
KK+ D+HR +AN+A+AHY
Sbjct: 136 KKREDVHRMADANKAFAHY 154
>TIGR_CMR|CHY_2314 [details] [associations]
symbol:CHY_2314 "ribosomal protein S7" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000235 InterPro:IPR005717
InterPro:IPR020606 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10
HAMAP:MF_00480_B InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 TIGRFAMs:TIGR01029 HOGENOM:HOG000039067
eggNOG:COG0049 KO:K02992 OMA:RREKTMT ProtClustDB:PRK05302
PANTHER:PTHR11205:SF13 RefSeq:YP_361123.1 ProteinModelPortal:Q3A9R1
SMR:Q3A9R1 STRING:Q3A9R1 PRIDE:Q3A9R1 GeneID:3726567
KEGG:chy:CHY_2314 PATRIC:21277697
BioCyc:CHYD246194:GJCN-2313-MONOMER Uniprot:Q3A9R1
Length = 156
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 85 GNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKLRS 144
G+K L ++ T+ K+ EK D RE DP + ++A++N P+L++R
Sbjct: 19 GSK-LVTKLINKTMVDGKKSLAEKICYRAFDIIREKTGRDPLEVFEEAMKNVMPVLEVRP 77
Query: 145 IKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGADNKGKVVK 204
+ YQVP+ + + + ++W + A+++ + LA ++D A+ G VK
Sbjct: 78 RRVGGANYQVPVEVRPERRQSLAIRWIVNYARERNGR-SMEEKLAAEIMDAANGVGGAVK 136
Query: 205 KKTDLHRQCEANRAYAHY 222
KK D H+ EAN+A+AHY
Sbjct: 137 KKEDTHKMAEANKAFAHY 154
>UNIPROTKB|P41194 [details] [associations]
symbol:rpsG "30S ribosomal protein S7" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR000235
InterPro:IPR005717 InterPro:IPR020606 PIRSF:PIRSF002122
PROSITE:PS00052 Pfam:PF00177 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 EMBL:BX842574 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10
HAMAP:MF_00480_B InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 TIGRFAMs:TIGR01029 HOGENOM:HOG000039067
eggNOG:COG0049 KO:K02992 EMBL:L08011 OMA:RREKTMT
ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13 PIR:D70827
RefSeq:NP_215197.1 RefSeq:NP_335123.1 RefSeq:YP_006514026.1
ProteinModelPortal:P41194 SMR:P41194 PRIDE:P41194
EnsemblBacteria:EBMYCT00000001141 EnsemblBacteria:EBMYCT00000072296
GeneID:13318571 GeneID:888245 GeneID:925996 KEGG:mtc:MT0711
KEGG:mtu:Rv0683 KEGG:mtv:RVBD_0683 PATRIC:18123289
TubercuList:Rv0683 Uniprot:P41194
Length = 156
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 38/138 (27%), Positives = 75/138 (54%)
Query: 85 GNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKLRS 144
G++ + + V + +K K + E+ ++ R+ DP + + +A++N KP L++RS
Sbjct: 19 GSQLVTQLVNKVLLKGKKSLA-ERIVYGALEQARDKTGTDPVITLKRALDNVKPALEVRS 77
Query: 145 IKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGADNKGKVVK 204
+ TYQVP+ + + ++W + ++ + E + LA ++D ++ G VK
Sbjct: 78 RRVGGATYQVPVEVRPDRSTTLALRWLVGYSRQR-REKTMIERLANEILDASNGLGASVK 136
Query: 205 KKTDLHRQCEANRAYAHY 222
++ D H+ EANRA+AHY
Sbjct: 137 RREDTHKMAEANRAFAHY 154
>TIGR_CMR|SO_0227 [details] [associations]
symbol:SO_0227 "ribosomal protein S7" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 GO:GO:0006412
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10 HAMAP:MF_00480_B
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973
TIGRFAMs:TIGR01029 HOGENOM:HOG000039067 eggNOG:COG0049 KO:K02992
OMA:RREKTMT ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13
RefSeq:NP_715867.1 ProteinModelPortal:Q8EK72 SMR:Q8EK72
GeneID:1168110 KEGG:son:SO_0227 PATRIC:23520147 Uniprot:Q8EK72
Length = 156
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 43/139 (30%), Positives = 72/139 (51%)
Query: 84 KGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKLR 143
K + EL + ++ K+ EK D E + I++ A++N +P ++++
Sbjct: 17 KFHSELLAKFINVIMQDGKKSTAEKIIYKALDVIAEKKGANHLDILEAALDNVRPSVEVK 76
Query: 144 SIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGADNKGKVV 203
S + TYQVP + M+W +E A+ K E + LA ++D ++NKG V
Sbjct: 77 SRRVGGSTYQVPCEVRPVRRNALAMRWLVEAAR-KRGEKSMALRLAGEMLDASENKGTAV 135
Query: 204 KKKTDLHRQCEANRAYAHY 222
KK+ D+HR EAN+A+AHY
Sbjct: 136 KKREDVHRMAEANKAFAHY 154
>UNIPROTKB|P02359 [details] [associations]
symbol:rpsG "30S ribosomal subunit protein S7"
species:83333 "Escherichia coli K-12" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0019843 "rRNA binding"
evidence=IEA;IDA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 GO:GO:0016020
GO:GO:0017148 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0003729 EMBL:U18997
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PDB:3J00 PDBsum:3J00
GO:GO:0000028 EMBL:X64592 EMBL:J01689 EMBL:X65735 PDB:3FIH PDB:3IZV
PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 PDB:3SFS
PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ PDB:1EG0 PDBsum:1EG0
Gene3D:1.10.455.10 HAMAP:MF_00480_B InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 TIGRFAMs:TIGR01029
HOGENOM:HOG000039067 eggNOG:COG0049 KO:K02992 PDB:4GAS PDB:4GD1
PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87 PDB:1VS5
PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P PDB:2I2U
PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF PDB:2QBH
PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO PDB:2VHP
PDB:2WWL PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A PDB:3E1C
PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21 PDB:3J0U
PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18 PDB:3KC4
PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP PDB:3OFX
PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ PDB:4GD2
PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5 PDBsum:1VS7
PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB PDBsum:2I2P
PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9 PDBsum:2QBB
PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ PDBsum:2QOU
PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO PDBsum:2VHP
PDBsum:2WWL PDBsum:2Z4K PDBsum:2Z4M PDBsum:3DF1 PDBsum:3DF3
PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M PDBsum:3I1O PDBsum:3I1Q
PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21 PDBsum:3J0U PDBsum:3J0V
PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10 PDBsum:3J13 PDBsum:3J18
PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR PDBsum:3OFA PDBsum:3OFB
PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX PDBsum:3OFY PDBsum:3OR9
PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV PDBsum:4GAQ PDBsum:4GD2
EMBL:V00355 EMBL:J01688 OMA:RREKTMT ProtClustDB:PRK05302
PANTHER:PTHR11205:SF13 PIR:H65127 RefSeq:NP_417800.1
RefSeq:YP_492091.1 ProteinModelPortal:P02359 SMR:P02359
DIP:DIP-10783N IntAct:P02359 MINT:MINT-1236482 PhosSite:P0810434
PaxDb:P02359 PRIDE:P02359 EnsemblBacteria:EBESCT00000003935
EnsemblBacteria:EBESCT00000015083 GeneID:12933477 GeneID:947846
KEGG:ecj:Y75_p3835 KEGG:eco:b3341 PATRIC:32122114 EchoBASE:EB0899
EcoGene:EG10906 BioCyc:EcoCyc:EG10906-MONOMER
BioCyc:ECOL316407:JW3303-MONOMER EvolutionaryTrace:P02359
Genevestigator:P02359 Uniprot:P02359
Length = 179
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 36/91 (39%), Positives = 55/91 (60%)
Query: 132 AIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQI 191
A+EN +P ++++S + TYQVP+ + M+W +E A+ K + + LA
Sbjct: 65 ALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAAR-KRGDKSMALRLANE 123
Query: 192 LIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L D A+NKG VKK+ D+HR EAN+A+AHY
Sbjct: 124 LSDAAENKGTAVKKREDVHRMAEANKAFAHY 154
>TIGR_CMR|SPO_3500 [details] [associations]
symbol:SPO_3500 "ribosomal protein S7" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10 HAMAP:MF_00480_B
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973
TIGRFAMs:TIGR01029 HOGENOM:HOG000039067 eggNOG:COG0049 KO:K02992
OMA:RREKTMT ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13
RefSeq:YP_168695.1 ProteinModelPortal:Q5LMR3 SMR:Q5LMR3
GeneID:3196305 KEGG:sil:SPO3500 PATRIC:23380467 Uniprot:Q5LMR3
Length = 156
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 40/140 (28%), Positives = 72/140 (51%)
Query: 83 KKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKL 142
K G+K L + + + K + E+ D I P + +A++N KP +++
Sbjct: 17 KFGDKVLTKFMNNLMIDGKKSVA-ERIVYNAFDRVENKIKRAPVEVFHEALDNIKPSVEV 75
Query: 143 RSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGADNKGKV 202
RS + TYQVP+ + + ++W I A+++ +E + LA L+D ++G
Sbjct: 76 RSRRVGGATYQVPVEVRPERREALAIRWLIAAARNR-NENTMEERLAGELLDAVQSRGTA 134
Query: 203 VKKKTDLHRQCEANRAYAHY 222
VKK+ D H+ EAN+A++HY
Sbjct: 135 VKKREDTHKMAEANKAFSHY 154
>TIGR_CMR|BA_0106 [details] [associations]
symbol:BA_0106 "ribosomal protein S7" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015935
Gene3D:1.10.455.10 HAMAP:MF_00480_B InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 TIGRFAMs:TIGR01029
HOGENOM:HOG000039067 eggNOG:COG0049 KO:K02992 OMA:RREKTMT
ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13 RefSeq:NP_842674.1
RefSeq:YP_016711.1 RefSeq:YP_026392.1 ProteinModelPortal:Q81VT4
SMR:Q81VT4 DNASU:1084609 EnsemblBacteria:EBBACT00000013166
EnsemblBacteria:EBBACT00000015141 EnsemblBacteria:EBBACT00000021076
GeneID:1084609 GeneID:2818770 GeneID:2850458 KEGG:ban:BA_0106
KEGG:bar:GBAA_0106 KEGG:bat:BAS0106
BioCyc:BANT260799:GJAJ-117-MONOMER
BioCyc:BANT261594:GJ7F-119-MONOMER Uniprot:Q81VT4
Length = 156
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 31/99 (31%), Positives = 58/99 (58%)
Query: 124 DPYVIIDKAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVR 183
+P + ++A++N P+L++R+ + YQVP+ + + ++W + A+ + E
Sbjct: 57 EPMEVFEQALKNIMPVLEVRARRVGGANYQVPVEVRPERRTTLGLRWLVNYARLR-GEKT 115
Query: 184 FSDNLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
+ LA ++D A+N G VKK+ D H+ EAN+A+AHY
Sbjct: 116 MEERLANEILDAANNAGASVKKREDTHKMAEANKAFAHY 154
>UNIPROTKB|P0C489 [details] [associations]
symbol:rps7-A "30S ribosomal protein S7, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 GO:GO:0009507
GO:GO:0009536 GO:GO:0016020 GO:GO:0006412 EMBL:AY522331
GO:GO:0003735 GO:GO:0009579 GO:GO:0019843 GO:GO:0015935
Gene3D:1.10.455.10 HAMAP:MF_00480_B InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 TIGRFAMs:TIGR01029
ProteinModelPortal:P0C489 SMR:P0C489 PRIDE:P0C489 Gramene:P0C489
HOGENOM:HOG000039067 Genevestigator:P0C489 Uniprot:P0C489
Length = 156
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 47/156 (30%), Positives = 81/156 (51%)
Query: 69 FYNPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVI 128
F N + +N +MK G K LA ++ Y +++K+IQ ++ E+ +P ++
Sbjct: 18 FRNRLVNMVVNRIMKDGKKSLAYQIL-Y--RAVKKIQ----------QKTET---NPLLV 61
Query: 129 IDKAIENTKPIL--KLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSD 186
+ +AI P + K R K+ + T +VPI I K+ R ++W +E ++ +P +
Sbjct: 62 LRQAIRRVTPNIGVKTRRNKKGS-TRKVPIEIGSKQGRALAIRWLLEASQKRPGR-NMAF 119
Query: 187 NLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L+ L+D A G ++KK HR EANRA AH+
Sbjct: 120 KLSSELVDAAKGGGGAIRKKEATHRMAEANRALAHF 155
>UNIPROTKB|P0C490 [details] [associations]
symbol:rps7-A "30S ribosomal protein S7, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR000235 InterPro:IPR005717
InterPro:IPR020606 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412
EMBL:AY522329 GO:GO:0003735 GO:GO:0009579 GO:GO:0019843
GO:GO:0015935 ProtClustDB:CHL00053 Gene3D:1.10.455.10
HAMAP:MF_00480_B InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 TIGRFAMs:TIGR01029 RefSeq:YP_654246.2
RefSeq:YP_654259.2 ProteinModelPortal:P0C490 SMR:P0C490
PRIDE:P0C490 GeneID:4126905 GeneID:4126914 Gramene:P0C490
Uniprot:P0C490
Length = 156
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 47/156 (30%), Positives = 81/156 (51%)
Query: 69 FYNPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVI 128
F N + +N +MK G K LA ++ Y +++K+IQ ++ E+ +P ++
Sbjct: 18 FRNRLVNMVVNRIMKDGKKSLAYQIL-Y--RAVKKIQ----------QKTET---NPLLV 61
Query: 129 IDKAIENTKPIL--KLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSD 186
+ +AI P + K R K+ + T +VPI I K+ R ++W +E ++ +P +
Sbjct: 62 LRQAIRRVTPNIGVKTRRNKKGS-TRKVPIEIGSKQGRALAIRWLLEASQKRPGR-NMAF 119
Query: 187 NLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L+ L+D A G ++KK HR EANRA AH+
Sbjct: 120 KLSSELVDAAKGGGGAIRKKEATHRMAEANRALAHF 155
>UNIPROTKB|P0C491 [details] [associations]
symbol:rps7-A "30S ribosomal protein S7, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR000235 InterPro:IPR005717
InterPro:IPR020606 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412 EMBL:X15901
EMBL:AY522330 GenomeReviews:AY522330_GR GO:GO:0003735 GO:GO:0009579
GO:GO:0019843 GO:GO:0015935 ProtClustDB:CHL00053 Gene3D:1.10.455.10
HAMAP:MF_00480_B InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 TIGRFAMs:TIGR01029 EMBL:X06612 PIR:JQ0276
RefSeq:NP_039433.1 RefSeq:NP_039458.1 ProteinModelPortal:P0C491
SMR:P0C491 STRING:P0C491 EnsemblPlants:LOC_Os04g16744.1
EnsemblPlants:LOC_Os04g16856.1 EnsemblPlants:LOC_Os04g16886.1
EnsemblPlants:LOC_Os07g25002.1 EnsemblPlants:LOC_Os08g15246.1
EnsemblPlants:LOC_Os10g21372.1 EnsemblPlants:LOC_Osp1g00820.1
EnsemblPlants:LOC_Osp1g01050.1 GeneID:3131444 GeneID:3131445
KEGG:osa:3131444 KEGG:osa:3131445 Gramene:P0C491 eggNOG:COG0049
KO:K02992 OMA:IELLHIF Uniprot:P0C491
Length = 156
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 47/156 (30%), Positives = 81/156 (51%)
Query: 69 FYNPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVI 128
F N + +N +MK G K LA ++ Y +++K+IQ ++ E+ +P ++
Sbjct: 18 FRNRLVNMVVNRIMKDGKKSLAYQIL-Y--RAVKKIQ----------QKTET---NPLLV 61
Query: 129 IDKAIENTKPIL--KLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSD 186
+ +AI P + K R K+ + T +VPI I K+ R ++W +E ++ +P +
Sbjct: 62 LRQAIRRVTPNIGVKTRRNKKGS-TRKVPIEIGSKQGRALAIRWLLEASQKRPGR-NMAF 119
Query: 187 NLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L+ L+D A G ++KK HR EANRA AH+
Sbjct: 120 KLSSELVDAAKGGGGAIRKKEATHRMAEANRALAHF 155
>UNIPROTKB|Q6ENC1 [details] [associations]
symbol:rps7-A "30S ribosomal protein S7, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 GO:GO:0009507
GO:GO:0009536 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:AP006728 GO:GO:0015935 RefSeq:YP_052802.1 RefSeq:YP_052830.1
ProteinModelPortal:Q6ENC1 SMR:Q6ENC1 GeneID:2885894 GeneID:2885948
Gramene:Q6ENC1 ProtClustDB:CHL00053 Gene3D:1.10.455.10
HAMAP:MF_00480_B InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 TIGRFAMs:TIGR01029 Uniprot:Q6ENC1
Length = 156
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 47/156 (30%), Positives = 81/156 (51%)
Query: 69 FYNPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVI 128
F N + +N +MK G K LA ++ Y +++K+IQ ++ E+ +P ++
Sbjct: 18 FRNRLVNMVVNRIMKDGKKSLAYQIL-Y--RAVKKIQ----------QKTET---NPLLV 61
Query: 129 IDKAIENTKPIL--KLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSD 186
+ +AI P + K R K+ + T +VPI I K+ R ++W +E ++ +P +
Sbjct: 62 LRQAIRRVTPNIGVKTRRNKKGS-TRKVPIEIGSKQGRALAIRWLLEASQKRPGR-NMAF 119
Query: 187 NLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
L+ L+D A G ++KK HR EANRA AH+
Sbjct: 120 KLSSELVDAAKGGGGAIRKKEATHRMAEANRALAHF 155
>TIGR_CMR|DET_0471 [details] [associations]
symbol:DET_0471 "ribosomal protein S7" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000235 InterPro:IPR005717 PIRSF:PIRSF002122
PROSITE:PS00052 Pfam:PF00177 GO:GO:0006412 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000049 GO:GO:0019843
GO:GO:0015935 Gene3D:1.10.455.10 HAMAP:MF_00480_B
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973
TIGRFAMs:TIGR01029 HOGENOM:HOG000039067 eggNOG:COG0049 KO:K02992
OMA:RREKTMT ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13
RefSeq:YP_181215.1 ProteinModelPortal:Q3Z984 SMR:Q3Z984
STRING:Q3Z984 GeneID:3230158 KEGG:det:DET0471 PATRIC:21608011
BioCyc:DETH243164:GJNF-471-MONOMER Uniprot:Q3Z984
Length = 156
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 128 IIDKAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDN 187
+ ++ ++N P ++++ + TYQVPI + A+ M+W I+ A+ + + ++
Sbjct: 61 VFEQGLKNATPFIEVKPRRVGGATYQVPIEVRPDRAQTMAMRWIIKAARKRTGK-SMAER 119
Query: 188 LAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHY 222
LA +++ + +G VKK+ + H+ EANRA+ HY
Sbjct: 120 LAAEMLEASREQGAAVKKREETHKMAEANRAFVHY 154
>TIGR_CMR|NSE_0688 [details] [associations]
symbol:NSE_0688 "ribosomal protein S7" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0015935 Gene3D:1.10.455.10
HAMAP:MF_00480_B InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 TIGRFAMs:TIGR01029 HOGENOM:HOG000039067
eggNOG:COG0049 KO:K02992 OMA:RREKTMT ProtClustDB:PRK05302
PANTHER:PTHR11205:SF13 RefSeq:YP_506565.1 ProteinModelPortal:Q2GD81
STRING:Q2GD81 GeneID:3932103 KEGG:nse:NSE_0688 PATRIC:22681395
BioCyc:NSEN222891:GHFU-701-MONOMER Uniprot:Q2GD81
Length = 175
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 32/142 (22%), Positives = 68/142 (47%)
Query: 83 KKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIENTKPILKL 142
+K N ++ + + +K KR EK ++ + + + ++ + N P ++L
Sbjct: 16 RKYNSKIVAKFINHVMKKGKRALAEKIVYGAMEKAEKQLGVPAMDVLTGVLANISPAVEL 75
Query: 143 RSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILIDGADNKGKV 202
RS + V Y++P+PI ++ +RF W + A+ K + D +A L++ G
Sbjct: 76 RSFRAGGVNYRIPVPIKEERSRFIAFGWLLSEAR-KRKGMCSRDRIALELLEAHSGHGGA 134
Query: 203 VKKKTDLHRQCEANRAYAHYYF 224
+K + + E+ RA++H+ F
Sbjct: 135 FRKFEENVKVAESGRAFSHFRF 156
>TIGR_CMR|APH_1034 [details] [associations]
symbol:APH_1034 "ribosomal protein S7" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000235 InterPro:IPR005717 InterPro:IPR020606
PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177 GO:GO:0006412
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0000049
GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10 HAMAP:MF_00480_B
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973
TIGRFAMs:TIGR01029 HOGENOM:HOG000039067 eggNOG:COG0049 KO:K02992
RefSeq:YP_505592.1 ProteinModelPortal:Q2GJ59 STRING:Q2GJ59
GeneID:3931067 KEGG:aph:APH_1034 PATRIC:20950818 OMA:RREKTMT
ProtClustDB:PRK05302 BioCyc:APHA212042:GHPM-1040-MONOMER
PANTHER:PTHR11205:SF13 Uniprot:Q2GJ59
Length = 160
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 40/156 (25%), Positives = 77/156 (49%)
Query: 71 NPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIID 130
N + +F+N +M +G K LA ++ +K A S + ES I I +
Sbjct: 20 NVLLARFVNVVMHQGKKALAEKIVFGALKM-----------AESRLQGESGI----AIFN 64
Query: 131 KAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKD--KPSEVRFSDNL 188
A+ N P +++RS + VTYQ+P+ + + + ++W ++ A+ K + + L
Sbjct: 65 TAVANVMPKMEVRSRRVGGVTYQIPVEVREDRSTSLALRWIVKAARASRKRTNKTYMSCL 124
Query: 189 AQILIDGADNKGKVVKKKTDLHRQCEANRAYAHYYF 224
L++ + +G K K + +R EAN+A++H+ F
Sbjct: 125 CHELMEAYNKRGGACKIKEEKYRMAEANKAFSHFRF 160
>TIGR_CMR|ECH_0962 [details] [associations]
symbol:ECH_0962 "ribosomal protein S7" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000235 InterPro:IPR005717 PIRSF:PIRSF002122
PROSITE:PS00052 Pfam:PF00177 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015935 Gene3D:1.10.455.10 HAMAP:MF_00480_B
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973
TIGRFAMs:TIGR01029 HOGENOM:HOG000039067 eggNOG:COG0049 KO:K02992
OMA:RREKTMT ProtClustDB:PRK05302 PANTHER:PTHR11205:SF13
RefSeq:YP_507749.1 ProteinModelPortal:Q2GFN4 SMR:Q2GFN4
STRING:Q2GFN4 GeneID:3927137 KEGG:ech:ECH_0962 PATRIC:20577306
BioCyc:ECHA205920:GJNR-965-MONOMER Uniprot:Q2GFN4
Length = 160
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 44/158 (27%), Positives = 76/158 (48%)
Query: 70 YNPVK-EKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVI 128
YN V +FIN +M+ G + +A ++ Y S KA S ES + I
Sbjct: 18 YNSVLLARFINVIMRSGERSIAEKIV-YGALS----------KAES-RLGESAMS----I 61
Query: 129 IDKAIENTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKD--KPSEVRFSD 186
A+ N P +++RS + VTYQVP+ + + A ++W + A K S + D
Sbjct: 62 FSAALNNVMPQMEVRSRRIGGVTYQVPVEVKEDRAVSLALRWIFKAAAAARKRSNKMYMD 121
Query: 187 NLAQILIDGADNKGKVVKKKTDLHRQCEANRAYAHYYF 224
L L++ + +G K + + ++ EAN+A++H+ F
Sbjct: 122 CLCNELLEAYNKRGGAYKMREEKYKMAEANKAFSHFRF 159
>TAIR|locus:2828051 [details] [associations]
symbol:AT2G07696 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000235
InterPro:IPR005717 PIRSF:PIRSF002122 PROSITE:PS00052 Pfam:PF00177
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0005763 EMBL:Y08501 EMBL:AC007729
GenomeReviews:Y08501_GR Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 TIGRFAMs:TIGR01029
HOGENOM:HOG000039067 eggNOG:COG0049 EMBL:BT011309 IPI:IPI00531169
RefSeq:NP_085579.1 RefSeq:NP_178787.1 UniGene:At.47775
ProteinModelPortal:P92557 SMR:P92557 STRING:P92557 PRIDE:P92557
EnsemblPlants:AT2G07696.1 EnsemblPlants:ATMG01270.1 GeneID:3890469
GeneID:815372 KEGG:ath:ArthMp103 KEGG:ath:AT2G07696 TAIR:AtMg01270
OMA:RRENLHG PhylomeDB:P92557 ProtClustDB:CLSN2683484
ArrayExpress:P92557 Genevestigator:P92557 GermOnline:ATMG01270
Uniprot:P92557
Length = 148
Score = 118 (46.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 35/141 (24%), Positives = 67/141 (47%)
Query: 87 KELAREVFEYTVKSIKRIQIEK--YNKATSDEERESIILDPYVIIDKAIENTKPILKLRS 144
K L +++ + +K KR ++ Y E ++ +++D A+EN KPI ++
Sbjct: 9 KLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIK--LMVD-AVENIKPICEVAK 65
Query: 145 IKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFS---DNLAQILIDGADNKGK 201
+ A Y VP ++ + ++W +E A + R S + A+IL D +G
Sbjct: 66 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEIL-DAYQKRGS 124
Query: 202 VVKKKTDLHRQCEANRAYAHY 222
+K+ +LH NR++AH+
Sbjct: 125 ARRKRENLHGLASTNRSFAHF 145
>POMBASE|SPAC16E8.10c [details] [associations]
symbol:SPAC16E8.10c "mitochondrial ribosomal protein
subunit S7 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR000235
InterPro:IPR020606 PROSITE:PS00052 Pfam:PF00177
PomBase:SPAC16E8.10c EMBL:CU329670 GO:GO:0003723 GO:GO:0003735
GO:GO:0032543 GO:GO:0005763 Gene3D:1.10.455.10 InterPro:IPR023798
PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049 HSSP:P17291
PIR:T37790 RefSeq:NP_594222.2 ProteinModelPortal:O13744
STRING:O13744 EnsemblFungi:SPAC16E8.10c.1 GeneID:2542330
KEGG:spo:SPAC16E8.10c OrthoDB:EOG4HB1W8 NextBio:20803391
Uniprot:O13744
Length = 259
Score = 127 (49.8 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 41/146 (28%), Positives = 67/146 (45%)
Query: 75 EKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIIDKAIE 134
+ +N +M+ G K A ++ T SI IQ K T + +P ++ +AI
Sbjct: 127 QHLVNLIMRDGKKAKAEKIVA-TALSI--IQ-----KETGE--------NPIDVLKQAIA 170
Query: 135 NTKPILKLRSIKRAAVTYQVPIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLAQILID 194
P++KL S KR + + P+P+ +++ R ++W + K S R SD + + +I
Sbjct: 171 EISPLMKLVSAKRFNKSVEFPMPLKERQRRRIALQWILGECKSS-SPKRLSDRIVKEIIA 229
Query: 195 GADNKGKVVKKKTDLHRQCEANRAYA 220
KKK LHR C NR A
Sbjct: 230 IRSKTSNCFKKKDHLHRMCLVNRGNA 255
>CGD|CAL0004686 [details] [associations]
symbol:orf19.4018 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005763 "mitochondrial small
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000235
InterPro:IPR020606 PROSITE:PS00052 CGD:CAL0004686 Pfam:PF00177
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:AACQ01000012 EMBL:AACQ01000011
Gene3D:1.10.455.10 InterPro:IPR023798 PANTHER:PTHR11205
SUPFAM:SSF47973 eggNOG:COG0049 KO:K02989 HOGENOM:HOG000000824
RefSeq:XP_721926.1 RefSeq:XP_722087.1 ProteinModelPortal:Q5AK02
STRING:Q5AK02 GeneID:3636316 GeneID:3636472 KEGG:cal:CaO19.11501
KEGG:cal:CaO19.4018 Uniprot:Q5AK02
Length = 251
Score = 120 (47.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/150 (23%), Positives = 70/150 (46%)
Query: 71 NPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIID 130
+P + N +M+ G K A++V +++ +Q+ K K DP ++
Sbjct: 116 DPTVDNLTNLIMRHGKKAKAQKVVS---RALYIVQL-KLRK------------DPIEVLR 159
Query: 131 KAIENTKPILKLRSIKRAAVTYQV-PIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLA 189
+ ++ P++ +++ +V PIP+++K+ +KW +E + + S FS LA
Sbjct: 160 ETLDKLGPLVNTKTMSTGVAKKRVVPIPLNEKQRNRFAIKWILEASNSRKSN-DFSVRLA 218
Query: 190 QILIDGADNKGKVVKKKTDLHRQCEANRAY 219
+ +I+ K KK +H+Q RAY
Sbjct: 219 EEIINAYQGKSSGYDKKAQMHKQATQQRAY 248
>UNIPROTKB|Q5AK02 [details] [associations]
symbol:RSM7 "Likely mitochondrial ribosomal protein S7"
species:237561 "Candida albicans SC5314" [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000235 InterPro:IPR020606
PROSITE:PS00052 CGD:CAL0004686 Pfam:PF00177 GO:GO:0005739
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000012 EMBL:AACQ01000011 Gene3D:1.10.455.10
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973 eggNOG:COG0049
KO:K02989 HOGENOM:HOG000000824 RefSeq:XP_721926.1
RefSeq:XP_722087.1 ProteinModelPortal:Q5AK02 STRING:Q5AK02
GeneID:3636316 GeneID:3636472 KEGG:cal:CaO19.11501
KEGG:cal:CaO19.4018 Uniprot:Q5AK02
Length = 251
Score = 120 (47.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/150 (23%), Positives = 70/150 (46%)
Query: 71 NPVKEKFINYMMKKGNKELAREVFEYTVKSIKRIQIEKYNKATSDEERESIILDPYVIID 130
+P + N +M+ G K A++V +++ +Q+ K K DP ++
Sbjct: 116 DPTVDNLTNLIMRHGKKAKAQKVVS---RALYIVQL-KLRK------------DPIEVLR 159
Query: 131 KAIENTKPILKLRSIKRAAVTYQV-PIPISDKEARFKCMKWHIEIAKDKPSEVRFSDNLA 189
+ ++ P++ +++ +V PIP+++K+ +KW +E + + S FS LA
Sbjct: 160 ETLDKLGPLVNTKTMSTGVAKKRVVPIPLNEKQRNRFAIKWILEASNSRKSN-DFSVRLA 218
Query: 190 QILIDGADNKGKVVKKKTDLHRQCEANRAY 219
+ +I+ K KK +H+Q RAY
Sbjct: 219 EEIINAYQGKSSGYDKKAQMHKQATQQRAY 248
>ASPGD|ASPL0000060653 [details] [associations]
symbol:AN0470 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000235 Pfam:PF00177 EMBL:BN001308
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.455.10
InterPro:IPR023798 PANTHER:PTHR11205 SUPFAM:SSF47973
EnsemblFungi:CADANIAT00002223 OMA:QVTNLLM Uniprot:C8VT59
Length = 371
Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
Identities = 34/148 (22%), Positives = 69/148 (46%)
Query: 70 YNPVKEKFINYMMKKGNKELARE---VFEYTVKSIKRIQIEKYNKATSDEERESIILDPY 126
Y PV E+F +M+ G A++ + ++S QI + L+P
Sbjct: 203 YEPVVEQFTKNLMRDGKLATAQKNMNIILDILRSSPPPQINPRRPLLPGPAPAQLPLNPI 262
Query: 127 VIIDKAIENTKPILKLRSIKRAAV---TYQVPIPISDKEARFKCMKWHIEIAKDKPSEVR 183
+ +++ P++KL K A T Q+P+ +++K+ R + W I+ A +K + +
Sbjct: 263 AYLTLIVDSVAPLIKLHHAKGIAGGGNTMQIPLALAEKQRRRAAIGWIID-ASNKRRDAK 321
Query: 184 FSDNLAQILIDGADNKGKVVKKKTDLHR 211
+ +A LI A+ + V +K+ +H+
Sbjct: 322 LAHRVANELIAVAEGRSGVWEKRDGVHK 349
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 225 225 0.00077 113 3 11 22 0.39 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 596 (63 KB)
Total size of DFA: 179 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.80u 0.11s 22.91t Elapsed: 00:00:05
Total cpu time: 22.81u 0.11s 22.92t Elapsed: 00:00:05
Start: Thu Aug 15 15:30:25 2013 End: Thu Aug 15 15:30:30 2013