Your job contains 1 sequence.
>psy424
MTPAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYT
DDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRSSS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy424
(98 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010638 - symbol:Sec61beta "Sec61beta" species:722... 364 2.0e-33 1
UNIPROTKB|Q2NKT5 - symbol:SEC61B "Sec61 beta subunit" spe... 315 3.1e-28 1
ZFIN|ZDB-GENE-040718-260 - symbol:sec61b "Sec61 beta subu... 313 5.0e-28 1
RGD|1304997 - symbol:Sec61b "Sec61 beta subunit" species:... 312 6.4e-28 1
UNIPROTKB|F1NWX7 - symbol:SEC61B "Uncharacterized protein... 311 8.2e-28 1
UNIPROTKB|P60467 - symbol:SEC61B "Protein transport prote... 311 8.2e-28 1
UNIPROTKB|P60468 - symbol:SEC61B "Protein transport prote... 311 8.2e-28 1
UNIPROTKB|F2Z5P0 - symbol:SEC61B "Uncharacterized protein... 311 8.2e-28 1
UNIPROTKB|Q5RB31 - symbol:SEC61B "Protein transport prote... 311 8.2e-28 1
MGI|MGI:1913462 - symbol:Sec61b "Sec61 beta subunit" spec... 308 1.7e-27 1
WB|WBGene00021427 - symbol:Y38F2AR.9 species:6239 "Caenor... 252 1.5e-21 1
TAIR|locus:2175108 - symbol:AT5G60460 "AT5G60460" species... 166 1.9e-12 1
TAIR|locus:2055567 - symbol:SEC61 BETA "AT2G45070" specie... 160 8.2e-12 1
TAIR|locus:2103376 - symbol:AT3G60540 "AT3G60540" species... 154 3.5e-11 1
DICTYBASE|DDB_G0278117 - symbol:sec61b "protein transport... 151 7.4e-11 1
UNIPROTKB|G4N713 - symbol:MGG_03644 "Uncharacterized prot... 150 9.4e-11 1
POMBASE|SPBC2G2.03c - symbol:sbh1 "translocon beta subuni... 132 7.6e-09 1
GENEDB_PFALCIPARUM|MAL8P1.51 - symbol:MAL8P1.51 "protein-... 113 7.8e-07 1
UNIPROTKB|C0H4W6 - symbol:MAL8P1.51 "Sec61 beta subunit, ... 113 7.8e-07 1
SGD|S000002127 - symbol:SBH2 "Ssh1p-Sss1p-Sbh2p complex c... 97 3.9e-05 1
SGD|S000002128 - symbol:SBH1 "Beta subunit of the Sec61p ... 92 0.00013 1
>FB|FBgn0010638 [details] [associations]
symbol:Sec61beta "Sec61beta" species:7227 "Drosophila
melanogaster" [GO:0006616 "SRP-dependent cotranslational protein
targeting to membrane, translocation" evidence=ISS] [GO:0005784
"Sec61 translocon complex" evidence=ISS;NAS] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0010507 "negative regulation of
autophagy" evidence=IMP] Pfam:PF03911 PANTHER:PTHR13509
EMBL:AE013599 GO:GO:0010507 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 GeneTree:ENSGT00390000003561
OMA:GSGGMWR eggNOG:NOG282971 EMBL:AY071155 EMBL:BT050441
EMBL:AJ249754 RefSeq:NP_652037.1 UniGene:Dm.3305 SMR:Q7JZN0
IntAct:Q7JZN0 STRING:Q7JZN0 EnsemblMetazoa:FBtr0087498 GeneID:46080
KEGG:dme:Dmel_CG10130 UCSC:CG10130-RA CTD:46080 FlyBase:FBgn0010638
InParanoid:Q7JZN0 OrthoDB:EOG473N7Z GenomeRNAi:46080 NextBio:838730
Uniprot:Q7JZN0
Length = 100
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 77/99 (77%), Positives = 82/99 (82%)
Query: 3 PAPASSTSVGSGTRSP-KAGGP--GGRPTGSTVRQRKPTT-TTAARSNRTG-AGSGGMWR 57
PAPASSTSVGSG+RSP K P G GST++QRK TT TTAARS G AG+GGMWR
Sbjct: 2 PAPASSTSVGSGSRSPSKLSAPRSAGSGGGSTLKQRKTTTSTTAARSRAPGGAGTGGMWR 61
Query: 58 YYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
+YTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKY RS
Sbjct: 62 FYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100
>UNIPROTKB|Q2NKT5 [details] [associations]
symbol:SEC61B "Sec61 beta subunit" species:9913 "Bos
taurus" [GO:0031205 "endoplasmic reticulum Sec complex"
evidence=IDA] [GO:0048408 "epidermal growth factor binding"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0000060 GO:GO:0030433 GO:GO:0030970 GO:GO:0031205
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 OMA:GSGGMWR
OrthoDB:EOG4STS6D eggNOG:NOG282971 EMBL:DAAA02023273 EMBL:BC111652
IPI:IPI00714767 RefSeq:NP_001068760.1 UniGene:Bt.4410 STRING:Q2NKT5
Ensembl:ENSBTAT00000003190 GeneID:506986 KEGG:bta:506986
InParanoid:Q2NKT5 NextBio:20867841 Uniprot:Q2NKT5
Length = 96
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 65/95 (68%), Positives = 72/95 (75%)
Query: 3 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 61
PAP S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PAP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 62 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>ZFIN|ZDB-GENE-040718-260 [details] [associations]
symbol:sec61b "Sec61 beta subunit" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF03911 ZFIN:ZDB-GENE-040718-260 PANTHER:PTHR13509
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952 eggNOG:NOG248540
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 OMA:GSGGMWR
OrthoDB:EOG4STS6D EMBL:CU914485 EMBL:BC076372 IPI:IPI00503730
RefSeq:NP_001002527.1 UniGene:Dr.75889 STRING:Q6DGH3
Ensembl:ENSDART00000059013 GeneID:791986 KEGG:dre:791986
NextBio:20930874 Uniprot:Q6DGH3
Length = 97
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 64/98 (65%), Positives = 78/98 (79%)
Query: 3 PAPASS-TSVGSGTRSP-KAGGPGGRPTGSTVRQRKPTTTTAARSNRT--GAGSGGMWRY 58
P PA+S T+VG+ +RSP K P R G++ RQRK T+++A R+ AG+GGMWR+
Sbjct: 2 PGPAASATNVGASSRSPSKTVAP--RTAGTSARQRKATSSSARSGGRSTASAGTGGMWRF 59
Query: 59 YTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
YT+DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 60 YTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 97
>RGD|1304997 [details] [associations]
symbol:Sec61b "Sec61 beta subunit" species:10116 "Rattus
norvegicus" [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA;ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA;ISO] [GO:0043022 "ribosome binding" evidence=ISO]
[GO:0048408 "epidermal growth factor binding" evidence=IEA;ISO]
RGD:1304997 Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0000060
GO:GO:0030433 GO:GO:0030970 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
eggNOG:NOG248540 GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281
OrthoDB:EOG4STS6D EMBL:BC167110 EMBL:CH474056 IPI:IPI00364983
RefSeq:NP_001100124.1 UniGene:Rn.103030 MINT:MINT-7138994
STRING:B2RZD1 Ensembl:ENSRNOT00000008329 GeneID:298068
KEGG:rno:298068 UCSC:RGD:1304997 NextBio:643084
Genevestigator:B2RZD1 Uniprot:B2RZD1
Length = 96
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 64/95 (67%), Positives = 72/95 (75%)
Query: 3 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 61
P P S+T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SATNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 62 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>UNIPROTKB|F1NWX7 [details] [associations]
symbol:SEC61B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA] [GO:0048408 "epidermal
growth factor binding" evidence=IEA] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0000060 GO:GO:0030433 GO:GO:0030970 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 GeneTree:ENSGT00390000003561
OMA:GSGGMWR EMBL:AADN02008307 IPI:IPI00603738
Ensembl:ENSGALT00000022088 Uniprot:F1NWX7
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 65/96 (67%), Positives = 75/96 (78%)
Query: 3 PAPASSTSVGSGTRSP-KAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYT 60
P+P S+T+VG+ RSP KA P R GSTVRQRK + T + T G+GGMWR+YT
Sbjct: 4 PSP-SATNVGTSGRSPSKAVAP--RAAGSTVRQRKNASCGTRSAGRATSTGTGGMWRFYT 60
Query: 61 DDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
+DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 61 EDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>UNIPROTKB|P60467 [details] [associations]
symbol:SEC61B "Protein transport protein Sec61 subunit
beta" species:9615 "Canis lupus familiaris" [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=TAS] [GO:0031205 "endoplasmic reticulum Sec complex"
evidence=ISS] [GO:0048408 "epidermal growth factor binding"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Reactome:REACT_93968 Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0016021 GO:GO:0000060 Reactome:REACT_103209 GO:GO:0030433
GO:GO:0030970 GO:GO:0031205 GO:GO:0015450 PDB:2WWB PDBsum:2WWB
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 EMBL:L25052 PIR:S42409
RefSeq:NP_001003326.1 UniGene:Cfa.3895 ProteinModelPortal:P60467
SMR:P60467 STRING:P60467 PRIDE:P60467 Ensembl:ENSCAFT00000003996
GeneID:404018 KEGG:cfa:404018 CTD:10952 eggNOG:NOG248540
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 InParanoid:P60467
OMA:GSGGMWR OrthoDB:EOG4STS6D EvolutionaryTrace:P60467
NextBio:20817505 Uniprot:P60467
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 64/95 (67%), Positives = 71/95 (74%)
Query: 3 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 61
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 62 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>UNIPROTKB|P60468 [details] [associations]
symbol:SEC61B "Protein transport protein Sec61 subunit
beta" species:9606 "Homo sapiens" [GO:0048408 "epidermal growth
factor binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030433 "ER-associated protein catabolic process"
evidence=IDA] [GO:0031205 "endoplasmic reticulum Sec complex"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IMP] [GO:0002474 "antigen processing and
presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0006412 "translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0042590 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_17015
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021 Reactome:REACT_6900
GO:GO:0002479 GO:GO:0006412 GO:GO:0000060 GO:GO:0030433
EMBL:AL137067 TCDB:3.A.5.9.1 GO:GO:0030970 GO:GO:0031205
GO:GO:0006614 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952 eggNOG:NOG248540
HOVERGEN:HBG061281 OMA:GSGGMWR OrthoDB:EOG4STS6D EMBL:L25085
EMBL:CR456883 EMBL:BC001734 IPI:IPI00220835 PIR:S42410
RefSeq:NP_006799.1 UniGene:Hs.191887 ProteinModelPortal:P60468
SMR:P60468 DIP:DIP-40997N IntAct:P60468 MINT:MINT-106933
STRING:P60468 PhosphoSite:P60468 DMDM:42560366 PaxDb:P60468
PeptideAtlas:P60468 PRIDE:P60468 Ensembl:ENST00000223641
GeneID:10952 KEGG:hsa:10952 UCSC:uc004azh.3 GeneCards:GC09P101984
HGNC:HGNC:16993 HPA:HPA049407 MIM:609214 neXtProt:NX_P60468
PharmGKB:PA134888963 InParanoid:P60468 PhylomeDB:P60468
GenomeRNAi:10952 NextBio:41613 Bgee:P60468 CleanEx:HS_SEC61B
Genevestigator:P60468 GermOnline:ENSG00000106803 Uniprot:P60468
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 64/95 (67%), Positives = 71/95 (74%)
Query: 3 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 61
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 62 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>UNIPROTKB|F2Z5P0 [details] [associations]
symbol:SEC61B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048408 "epidermal growth factor binding" evidence=IEA]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0000060 GO:GO:0030433 GO:GO:0030970 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
GeneTree:ENSGT00390000003561 OMA:GSGGMWR EMBL:CU861555
RefSeq:NP_001230754.1 UniGene:Ssc.3932 ProteinModelPortal:F2Z5P0
SMR:F2Z5P0 PRIDE:F2Z5P0 Ensembl:ENSSSCT00000005924 GeneID:100511362
KEGG:ssc:100511362 Uniprot:F2Z5P0
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 64/95 (67%), Positives = 71/95 (74%)
Query: 3 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 61
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 62 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>UNIPROTKB|Q5RB31 [details] [associations]
symbol:SEC61B "Protein transport protein Sec61 subunit
beta" species:9601 "Pongo abelii" [GO:0031205 "endoplasmic
reticulum Sec complex" evidence=ISS] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0016021 GO:GO:0000060 GO:GO:0030433 GO:GO:0030970
GO:GO:0031205 KO:K09481 InterPro:IPR005609 InterPro:IPR016482
PIRSF:PIRSF006398 CTD:10952 GeneTree:ENSGT00390000003561
HOVERGEN:HBG061281 OMA:GSGGMWR EMBL:CR858826 RefSeq:NP_001129010.1
UniGene:Pab.19781 ProteinModelPortal:Q5RB31 SMR:Q5RB31 PRIDE:Q5RB31
Ensembl:ENSPPYT00000022675 GeneID:100190850 KEGG:pon:100190850
InParanoid:Q5RB31 Uniprot:Q5RB31
Length = 96
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 64/95 (67%), Positives = 71/95 (74%)
Query: 3 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 61
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 62 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
DSPG+KVGPVPVLVMSLLFIASVFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
>MGI|MGI:1913462 [details] [associations]
symbol:Sec61b "Sec61 beta subunit" species:10090 "Mus
musculus" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0030970
"retrograde protein transport, ER to cytosol" evidence=ISO]
[GO:0043022 "ribosome binding" evidence=IDA] [GO:0048408 "epidermal
growth factor binding" evidence=ISO] MGI:MGI:1913462 Pfam:PF03911
PANTHER:PTHR13509 GO:GO:0016021 GO:GO:0005789 GO:GO:0015031
GO:GO:0043022 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 OrthoDB:EOG4STS6D
eggNOG:NOG282971 EMBL:AK004505 EMBL:AK008739 EMBL:BC002089
EMBL:BC081445 IPI:IPI00133030 RefSeq:NP_077133.1 UniGene:Mm.20188
ProteinModelPortal:Q9CQS8 SMR:Q9CQS8 IntAct:Q9CQS8 STRING:Q9CQS8
PhosphoSite:Q9CQS8 PaxDb:Q9CQS8 PRIDE:Q9CQS8
Ensembl:ENSMUST00000065678 GeneID:66212 KEGG:mmu:66212
InParanoid:Q9CQS8 ChiTaRS:SEC61B NextBio:320979 Bgee:Q9CQS8
CleanEx:MM_SEC61B Genevestigator:Q9CQS8
GermOnline:ENSMUSG00000053317 Uniprot:Q9CQS8
Length = 96
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 63/95 (66%), Positives = 71/95 (74%)
Query: 3 PAPASSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTT-TAARSNRTGAGSGGMWRYYTD 61
P P S T+VGS RSP R GSTVRQRK + T + T AG+GGMWR+YT+
Sbjct: 4 PTP-SGTNVGSSGRSPSKA-VAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTE 61
Query: 62 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRS 96
DSPG+KVGPVPVLVMSLLFIA+VFMLHIWGKYTRS
Sbjct: 62 DSPGLKVGPVPVLVMSLLFIAAVFMLHIWGKYTRS 96
>WB|WBGene00021427 [details] [associations]
symbol:Y38F2AR.9 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF03911
PANTHER:PTHR13509 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 GeneTree:ENSGT00390000003561
eggNOG:NOG282971 EMBL:FO080872 RefSeq:NP_500197.1
ProteinModelPortal:Q95XS2 SMR:Q95XS2 STRING:Q95XS2 PaxDb:Q95XS2
EnsemblMetazoa:Y38F2AR.9.1 EnsemblMetazoa:Y38F2AR.9.2 GeneID:177027
KEGG:cel:CELE_Y38F2AR.9 UCSC:Y38F2AR.9.1 CTD:177027
WormBase:Y38F2AR.9 InParanoid:Q95XS2 OMA:QRKGGAT NextBio:895028
Uniprot:Q95XS2
Length = 81
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 22 GPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGPVPVLVMSLLFI 81
G RPT VRQRK A R G +GG+WR+YT+DS G+K+GPVPVLVMSL+FI
Sbjct: 5 GRSPRPTTGGVRQRKGGAAAAPARARAGGNNGGLWRFYTEDSTGLKIGPVPVLVMSLVFI 64
Query: 82 ASVFMLHIWGKYTRS 96
ASVF+LHIWGK+TRS
Sbjct: 65 ASVFVLHIWGKFTRS 79
>TAIR|locus:2175108 [details] [associations]
symbol:AT5G60460 "AT5G60460" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015031 "protein
transport" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB011483
HOGENOM:HOG000211109 KO:K09481 ProtClustDB:CLSN2683328
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
eggNOG:NOG282971 OMA:QRKGGAT EMBL:BT005455 EMBL:AK118120
IPI:IPI00536413 RefSeq:NP_200854.1 UniGene:At.43597
ProteinModelPortal:Q9FKK1 SMR:Q9FKK1 IntAct:Q9FKK1 STRING:Q9FKK1
PaxDb:Q9FKK1 PRIDE:Q9FKK1 EnsemblPlants:AT5G60460.1 GeneID:836167
KEGG:ath:AT5G60460 TAIR:At5g60460 InParanoid:Q9FKK1
PhylomeDB:Q9FKK1 ArrayExpress:Q9FKK1 Genevestigator:Q9FKK1
Uniprot:Q9FKK1
Length = 109
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 38/95 (40%), Positives = 53/95 (55%)
Query: 8 STSVGSGTRSPKAGGPGGRPTGST-VRQRK---PTTTTAARSNRTGAGSGGMWRYYTDDS 63
STS GS T P P G + +R+R+ ++ + G+GS M R+YTDD+
Sbjct: 11 STSTGSSTARPGLAAPRGSAAATAGMRRRRLGGGGGVSSGGGSGVGSGSSNMLRFYTDDA 70
Query: 64 PGIKVGPVPVLVMSLLFIASVFMLHIWGK-YTRSS 97
PG+K+ P VL+MSL FI V LH++GK Y S
Sbjct: 71 PGLKISPTVVLIMSLCFIGFVTALHVFGKLYLHKS 105
>TAIR|locus:2055567 [details] [associations]
symbol:SEC61 BETA "AT2G45070" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=ISS] [GO:0006457 "protein
folding" evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0015031
EMBL:Z26753 EMBL:BT000904 IPI:IPI00525929 PIR:T52378
RefSeq:NP_001031539.1 RefSeq:NP_001031540.1 RefSeq:NP_001078061.1
RefSeq:NP_182033.1 UniGene:At.25586 ProteinModelPortal:P38389
SMR:P38389 IntAct:P38389 STRING:P38389 PaxDb:P38389 PRIDE:P38389
EnsemblPlants:AT2G45070.1 EnsemblPlants:AT2G45070.2
EnsemblPlants:AT2G45070.3 EnsemblPlants:AT2G45070.4 GeneID:819114
KEGG:ath:AT2G45070 TAIR:At2g45070 eggNOG:NOG320639
HOGENOM:HOG000211109 InParanoid:P38389 KO:K09481 OMA:AAGSMLQ
PhylomeDB:P38389 ProtClustDB:CLSN2683328 Genevestigator:P38389
GermOnline:AT2G45070 InterPro:IPR005609 InterPro:IPR016482
PIRSF:PIRSF006398 Uniprot:P38389
Length = 82
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 11 VGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGP 70
VGSG +P+ G T S +R+RKPT+ A +G +G M ++YTDD+PG+K+ P
Sbjct: 2 VGSG--APQRGSAAA--TAS-MRRRKPTSG-AGGGGASGGAAGSMLQFYTDDAPGLKISP 55
Query: 71 VPVLVMSLLFIASVFMLHIWGK 92
VL+MS+ FIA V +LH+ GK
Sbjct: 56 NVVLIMSIGFIAFVAVLHVMGK 77
>TAIR|locus:2103376 [details] [associations]
symbol:AT3G60540 "AT3G60540" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=ISS] [GO:0009627 "systemic
acquired resistance" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] Pfam:PF03911
PANTHER:PTHR13509 EMBL:CP002686 EMBL:AL138646 KO:K09481
ProtClustDB:CLSN2683328 InterPro:IPR005609 InterPro:IPR016482
PIRSF:PIRSF006398 IPI:IPI00530812 PIR:T47865 RefSeq:NP_191613.1
RefSeq:NP_974467.1 UniGene:At.34426 ProteinModelPortal:Q9M206
SMR:Q9M206 STRING:Q9M206 EnsemblPlants:AT3G60540.1
EnsemblPlants:AT3G60540.2 GeneID:825225 KEGG:ath:AT3G60540
TAIR:At3g60540 InParanoid:Q9M206 OMA:NAVLIMS PhylomeDB:Q9M206
Genevestigator:Q9M206 Uniprot:Q9M206
Length = 81
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 11 VGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGP 70
VG G +P+ G T S +R+RKP A S+ G G+G M ++YTDD+PG+K+ P
Sbjct: 2 VGGG--APQRGSAAA--TAS-MRRRKP----AGGSSSAGGGAGTMLQFYTDDAPGLKISP 52
Query: 71 VPVLVMSLLFIASVFMLHIWGK 92
VL+MS+ FIA V +LH+ GK
Sbjct: 53 NVVLIMSIGFIAFVAVLHVMGK 74
>DICTYBASE|DDB_G0278117 [details] [associations]
symbol:sec61b "protein transport protein SEC61 beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0008565
"protein transporter activity" evidence=IC] [GO:0006613
"cotranslational protein targeting to membrane" evidence=ISS]
[GO:0005784 "Sec61 translocon complex" evidence=ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278117 Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0016021 GenomeReviews:CM000152_GR GO:GO:0008565
EMBL:AAFI02000023 GO:GO:0005784 GO:GO:0006613 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 RefSeq:XP_642138.1
STRING:Q54YR4 EnsemblProtists:DDB0235194 GeneID:8621346
KEGG:ddi:DDB_G0278117 eggNOG:NOG282971 OMA:VIILHIM Uniprot:Q54YR4
Length = 61
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 35 RKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYT 94
++P+T A + G S M ++Y++D+ G+KVGP VL MSL+FIA V +LHI GKYT
Sbjct: 2 KRPSTQRAPATVNKGGNS--MMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIMGKYT 59
Query: 95 RS 96
RS
Sbjct: 60 RS 61
>UNIPROTKB|G4N713 [details] [associations]
symbol:MGG_03644 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF03911 PANTHER:PTHR13509 EMBL:CM001234 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 RefSeq:XP_003716245.1
EnsemblFungi:MGG_03644T0 GeneID:2676629 KEGG:mgr:MGG_03644
Uniprot:G4N713
Length = 144
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 40/95 (42%), Positives = 52/95 (54%)
Query: 2 TPAPASSTSVGSGTRSPKAGGP-GGRPTGSTVR---QRKPTTTTAARSNRTGAGSGG--- 54
+PA A + + G+ P + P GG T R +K A S+ AG+GG
Sbjct: 8 SPANAPAAATGASVNRPSSPTPPGGARTAIRRRAAADQKEKIANARPSSTRAAGAGGSSS 67
Query: 55 -MWRYYTDDSPGIKVGPVPVLVMSLLFIASVFMLH 88
M R YTD+SPG+KV PV VLV+SL+FI SV LH
Sbjct: 68 TMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALH 102
>POMBASE|SPBC2G2.03c [details] [associations]
symbol:sbh1 "translocon beta subunit Sbh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005784 "Sec61 translocon complex"
evidence=ISO] [GO:0006616 "SRP-dependent cotranslational protein
targeting to membrane, translocation" evidence=ISO] [GO:0006620
"posttranslational protein targeting to membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=ISO] PomBase:SPBC2G2.03c
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005784 GO:GO:0006620 GO:GO:0006616
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 PIR:T40142 RefSeq:NP_596432.1
STRING:O43002 PRIDE:O43002 EnsemblFungi:SPBC2G2.03c.1
GeneID:2540282 KEGG:spo:SPBC2G2.03c eggNOG:NOG330120 OMA:YTDEANG
OrthoDB:EOG4SXRPB NextBio:20801412 Uniprot:O43002
Length = 102
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 36/92 (39%), Positives = 49/92 (53%)
Query: 7 SSTSVGSGTRSPKAGGPGGRPTGSTVRQRKPTTTTAARSNR--TGAGSGG-------MWR 57
SST ++ A PGG P S +R+R SN GA + G + +
Sbjct: 2 SSTKASGSVKNSAASAPGG-PK-SQIRRRAAVEKNTKESNSGPAGARAAGAPGSTPTLLK 59
Query: 58 YYTDDSPGIKVGPVPVLVMSLLFIASVFMLHI 89
YTD++ G KV PV V+V+S+ FIASVF+LHI
Sbjct: 60 LYTDEASGFKVDPVVVMVLSVGFIASVFLLHI 91
>GENEDB_PFALCIPARUM|MAL8P1.51 [details] [associations]
symbol:MAL8P1.51 "protein-transport protein
sec61 beta 1 subunit, putative" species:5833 "Plasmodium
falciparum" [GO:0005784 "Sec61 translocon complex" evidence=ISS]
[GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0006886 "intracellular protein transport" evidence=ISS]
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0008565 GO:GO:0005784
EMBL:AL844507 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 RefSeq:XP_002808866.1
ProteinModelPortal:C0H4W6 EnsemblProtists:MAL8P1.51:mRNA
GeneID:2655350 KEGG:pfa:MAL8P1.51 EuPathDB:PlasmoDB:PF3D7_0821800
ProtClustDB:CLSZ2431987 Uniprot:C0H4W6
Length = 80
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 24 GGRPTGSTVRQRKPTTT-TAARSNRTGAG-SGGMWRYYTDDSPGIKVGPVPVLVMSLLFI 81
GG T + RQ + ++ R G S + ++Y DDSPG K+ P VL+ +L+F+
Sbjct: 9 GGMRTPARRRQSNASANGNNSKQRRNSNGNSNSIVKFYGDDSPGFKLTPQTVLISTLIFM 68
Query: 82 ASVFMLHIWGK 92
ASV +LHI K
Sbjct: 69 ASVVILHIISK 79
>UNIPROTKB|C0H4W6 [details] [associations]
symbol:MAL8P1.51 "Sec61 beta subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005784 "Sec61
translocon complex" evidence=ISS] [GO:0008565 "protein transporter
activity" evidence=ISS] [GO:0015031 "protein transport"
evidence=ISS] Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0008565
GO:GO:0005784 EMBL:AL844507 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
RefSeq:XP_002808866.1 ProteinModelPortal:C0H4W6
EnsemblProtists:MAL8P1.51:mRNA GeneID:2655350 KEGG:pfa:MAL8P1.51
EuPathDB:PlasmoDB:PF3D7_0821800 ProtClustDB:CLSZ2431987
Uniprot:C0H4W6
Length = 80
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 24 GGRPTGSTVRQRKPTTT-TAARSNRTGAG-SGGMWRYYTDDSPGIKVGPVPVLVMSLLFI 81
GG T + RQ + ++ R G S + ++Y DDSPG K+ P VL+ +L+F+
Sbjct: 9 GGMRTPARRRQSNASANGNNSKQRRNSNGNSNSIVKFYGDDSPGFKLTPQTVLISTLIFM 68
Query: 82 ASVFMLHIWGK 92
ASV +LHI K
Sbjct: 69 ASVVILHIISK 79
>SGD|S000002127 [details] [associations]
symbol:SBH2 "Ssh1p-Sss1p-Sbh2p complex component"
species:4932 "Saccharomyces cerevisiae" [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0071261 "Ssh1 translocon
complex" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005086 "ARF guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IGI] [GO:0016020 "membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] SGD:S000002127 Pfam:PF03911
PANTHER:PTHR13509 GO:GO:0016021 EMBL:BK006939 EMBL:U18778
GO:GO:0005086 GO:GO:0006614 PDB:2WW9 PDB:2WWA PDBsum:2WW9
PDBsum:2WWA TCDB:3.A.5.8.1 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
eggNOG:NOG330120 OMA:YTDEANG OrthoDB:EOG4SXRPB GO:GO:0071261
GeneTree:ENSGT00390000015774 EMBL:Z50012 EMBL:L38891 EMBL:AY693199
PIR:S68163 RefSeq:NP_010936.1 ProteinModelPortal:P52871 SMR:P52871
DIP:DIP-1708N IntAct:P52871 MINT:MINT-396359 STRING:P52871
PaxDb:P52871 EnsemblFungi:YER019C-A GeneID:856740
KEGG:sce:YER019C-A CYGD:YER019c-a EvolutionaryTrace:P52871
NextBio:982870 Genevestigator:P52871 GermOnline:YER019C-A
Uniprot:P52871
Length = 88
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 26 RPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGPVPVLVMSLLFIASVF 85
R S ++ T T+ R G S + + YTD++ G +V + VL +S+ FI SV
Sbjct: 17 RQAQSIKEKQAKQTPTSTRQAGYGGSSSSILKLYTDEANGFRVDSLVVLFLSVGFIFSVI 76
Query: 86 MLHIWGKYT 94
LH+ K+T
Sbjct: 77 ALHLLTKFT 85
>SGD|S000002128 [details] [associations]
symbol:SBH1 "Beta subunit of the Sec61p ER translocation
complex" species:4932 "Saccharomyces cerevisiae" [GO:0031204
"posttranslational protein targeting to membrane, translocation"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005784 "Sec61 translocon complex" evidence=IDA] [GO:0006616
"SRP-dependent cotranslational protein targeting to membrane,
translocation" evidence=IMP] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=IDA]
SGD:S000002128 Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021
EMBL:BK006939 EMBL:U18839 GO:GO:0005784 GO:GO:0005086 GO:GO:0031204
GO:GO:0006616 KO:K00549 RefSeq:NP_011015.3 GeneID:856825
KEGG:sce:YER091C TCDB:3.A.5.8.1 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
OrthoDB:EOG4SXRPB EMBL:Z47789 PIR:S68162 RefSeq:NP_011011.3
ProteinModelPortal:P52870 SMR:P52870 DIP:DIP-5681N IntAct:P52870
MINT:MINT-529808 STRING:P52870 EnsemblFungi:YER087C-B GeneID:856821
KEGG:sce:YER087C-B CYGD:YER087c-b eggNOG:NOG307236
GeneTree:ENSGT00390000015774 NextBio:983103 Genevestigator:P52870
GermOnline:YER087C-B Uniprot:P52870
Length = 82
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 23 PGGRPTGSTVRQRKPTTTTAARSNRTGAGSGGMWRYYTDDSPGIKVGPVPVLVMSLLFIA 82
PGG+ T +Q A+ + + + + Y+D++ G++V P+ VL +++ FI
Sbjct: 7 PGGQRTLQKRKQGSSQKVAASAPKKNTNSNNSILKIYSDEATGLRVDPLVVLFLAVGFIF 66
Query: 83 SVFMLHIWGK 92
SV LH+ K
Sbjct: 67 SVVALHVISK 76
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 98 98 0.00091 102 3 11 23 0.44 30
29 0.45 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 492 (52 KB)
Total size of DFA: 99 KB (2071 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.48u 0.10s 15.58t Elapsed: 00:00:01
Total cpu time: 15.48u 0.10s 15.58t Elapsed: 00:00:01
Start: Thu Aug 15 15:45:42 2013 End: Thu Aug 15 15:45:43 2013