Query psy4241
Match_columns 305
No_of_seqs 255 out of 690
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 20:26:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4241.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4241hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nkl_A NK-lysin; saposin fold, 99.8 3.5E-20 1.2E-24 141.0 6.8 78 90-169 1-78 (78)
2 1of9_A Pore-forming peptide am 99.8 4.2E-20 1.4E-24 140.3 6.2 76 90-167 2-77 (77)
3 3bqp_A Proactivator polypeptid 99.8 2.4E-19 8.4E-24 135.6 7.8 79 90-169 2-80 (80)
4 2gtg_A Proactivator polypeptid 99.8 1.9E-19 6.6E-24 137.7 6.9 81 88-169 2-82 (83)
5 2qyp_A Proactivator polypeptid 99.8 1.5E-19 5.2E-24 140.9 5.9 83 88-171 3-85 (91)
6 4ddj_A Saposin-A, protein A; s 99.8 4.9E-19 1.7E-23 135.6 6.3 80 90-169 3-83 (83)
7 1l9l_A Granulysin; saposin fol 99.8 7.5E-19 2.6E-23 132.6 6.5 73 91-165 2-74 (74)
8 1n69_A Saposin B; lipid bindin 99.8 9.1E-19 3.1E-23 133.9 6.3 79 89-169 2-81 (81)
9 2js9_A Saposin-like protein fa 99.7 5.8E-19 2E-23 140.3 3.3 79 87-168 18-99 (99)
10 3rfi_A Asp; PSI, saposin, hydr 99.6 4.8E-17 1.7E-21 131.0 2.5 92 195-287 8-102 (108)
11 3s64_A AC-SLP-1, saposin-like 99.4 1.7E-13 5.8E-18 105.9 2.7 78 88-167 8-87 (87)
12 3rfi_A Asp; PSI, saposin, hydr 99.2 3.3E-12 1.1E-16 102.6 1.8 80 49-128 8-108 (108)
13 1qdm_A Prophytepsin; aspartic 98.9 1.8E-10 6.2E-15 114.1 2.6 90 197-287 288-381 (478)
14 3bqp_A Proactivator polypeptid 98.4 1.4E-07 4.7E-12 70.5 4.1 42 190-231 35-80 (80)
15 2qyp_A Proactivator polypeptid 98.4 1.2E-07 4E-12 73.2 3.0 46 190-235 38-87 (91)
16 1nkl_A NK-lysin; saposin fold, 98.4 2.5E-07 8.6E-12 69.6 3.9 42 190-231 34-78 (78)
17 2gtg_A Proactivator polypeptid 98.3 4.8E-07 1.6E-11 68.4 4.4 42 190-231 37-82 (83)
18 1of9_A Pore-forming peptide am 98.3 4.7E-07 1.6E-11 68.0 3.7 40 190-229 34-77 (77)
19 1n69_A Saposin B; lipid bindin 98.2 1.3E-06 4.6E-11 65.9 4.3 41 190-231 37-81 (81)
20 4ddj_A Saposin-A, protein A; s 98.1 2.1E-06 7.3E-11 64.8 3.4 36 196-231 47-83 (83)
21 2js9_A Saposin-like protein fa 98.0 1.2E-06 4.2E-11 69.1 1.6 41 190-230 52-99 (99)
22 1l9l_A Granulysin; saposin fol 97.9 7.2E-06 2.5E-10 61.3 4.4 39 189-227 32-74 (74)
23 1qdm_A Prophytepsin; aspartic 97.9 4.3E-06 1.5E-10 82.7 2.3 86 54-139 296-400 (478)
24 3s64_A AC-SLP-1, saposin-like 97.4 7.8E-05 2.7E-09 57.3 2.5 40 190-229 41-87 (87)
25 3s63_A Na-SLP-1, saposin-like 96.7 0.0056 1.9E-07 47.9 7.6 79 91-171 5-85 (117)
26 2w50_A ArMet-like protein 1; M 84.7 1.2 4E-05 34.9 4.6 73 92-165 5-86 (102)
27 2w51_A Protein arMet; MANF, CD 71.6 5.5 0.00019 33.4 5.1 73 91-164 4-85 (158)
28 2dwf_A Pulmonary surfactant-as 57.1 6.4 0.00022 24.3 2.1 17 93-109 1-17 (34)
29 3doe_B ADP-ribosylation factor 36.6 44 0.0015 28.1 4.8 68 97-164 24-99 (165)
No 1
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=99.80 E-value=3.5e-20 Score=140.97 Aligned_cols=78 Identities=14% Similarity=0.464 Sum_probs=74.9
Q ss_pred CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccccC
Q psy4241 90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNN 169 (305)
Q Consensus 90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC~~ 169 (305)
+..|.+|+++|+++++++.+|.|+++|+++|+++|+.+|. ++.+|+.||++|+|.||++|.++++|++||+.+|+|++
T Consensus 1 g~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~--~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~~ 78 (78)
T 1nkl_A 1 GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI--LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICKE 78 (78)
T ss_dssp CCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS--THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSCC
T ss_pred CCcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch--hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCCc
Confidence 3579999999999999999999999999999999999995 99999999999999999999999999999999999975
No 2
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=99.80 E-value=4.2e-20 Score=140.28 Aligned_cols=76 Identities=18% Similarity=0.507 Sum_probs=73.8
Q ss_pred CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241 90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC 167 (305)
Q Consensus 90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC 167 (305)
+..|.+|+++|+++++++.+| |+++|+++|+++|+.+|+ .++.+|+.+|++|+|.||++|.++++|++||+.+|+|
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~-~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASG-FIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSS-TTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 568999999999999999999 999999999999999997 7999999999999999999999999999999999999
No 3
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=99.78 E-value=2.4e-19 Score=135.63 Aligned_cols=79 Identities=35% Similarity=0.770 Sum_probs=76.1
Q ss_pred CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccccC
Q psy4241 90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLCNN 169 (305)
Q Consensus 90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC~~ 169 (305)
+..|.+|+++|+.++++|++|.|+++|.++|+++|+.+|. .++.+|+.+|++|+|.||++|.++++|+.||+.+|+|++
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~-~~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~~ 80 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPD-PYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPS 80 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCG-GGHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSCC
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCC-ccchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCCc
Confidence 5689999999999999999999999999999999999997 689999999999999999999999999999999999974
No 4
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=99.78 E-value=1.9e-19 Score=137.73 Aligned_cols=81 Identities=26% Similarity=0.703 Sum_probs=75.9
Q ss_pred CCCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241 88 DGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC 167 (305)
Q Consensus 88 ~~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC 167 (305)
.++..|.+|+++|+.++++|.+|.|+++|.++|+++|+.+|. .++.+|+.+|++|+|.||++|.++++|++||+.+|+|
T Consensus 2 ~~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~-~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC 80 (83)
T 2gtg_A 2 DSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK-SLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLC 80 (83)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH-HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSC
T ss_pred CCCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC-cchhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCC
Confidence 356789999999999999999999999999999999999996 6999999999999999999999999999999999999
Q ss_pred cC
Q psy4241 168 NN 169 (305)
Q Consensus 168 ~~ 169 (305)
++
T Consensus 81 ~~ 82 (83)
T 2gtg_A 81 SG 82 (83)
T ss_dssp C-
T ss_pred CC
Confidence 75
No 5
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=99.78 E-value=1.5e-19 Score=140.90 Aligned_cols=83 Identities=24% Similarity=0.656 Sum_probs=75.5
Q ss_pred CCCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241 88 DGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC 167 (305)
Q Consensus 88 ~~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC 167 (305)
.++..|.+|+++|++++++|++|.|+++|.++|+++|+.+|. .++.+|+.+|++|+|.||++|.++++|++||+.+|+|
T Consensus 3 ~~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~-~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC 81 (91)
T 2qyp_A 3 VSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK-SLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLC 81 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCS-STTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC
T ss_pred CCCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCC-CcccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCC
Confidence 356789999999999999999999999999999999999997 5899999999999999999999999999999999999
Q ss_pred cCcc
Q psy4241 168 NNAA 171 (305)
Q Consensus 168 ~~~~ 171 (305)
++++
T Consensus 82 ~~~~ 85 (91)
T 2qyp_A 82 SGTR 85 (91)
T ss_dssp ----
T ss_pred CCcc
Confidence 9865
No 6
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=99.76 E-value=4.9e-19 Score=135.57 Aligned_cols=80 Identities=29% Similarity=0.720 Sum_probs=74.8
Q ss_pred CCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcC-CChhhhcccccccc
Q psy4241 90 DDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQ-MNPDVVCSVAGLCN 168 (305)
Q Consensus 90 ~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~-~~P~~IC~~lglC~ 168 (305)
+..|.+|+++|+.+++++++|.|+++|+++|+++|+.+|.+.++.+|+.+|++|+|.||++|.++ .+|+.||+.+|+|+
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~~~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 46799999999999999999999999999999999999983369999999999999999999998 59999999999997
Q ss_pred C
Q psy4241 169 N 169 (305)
Q Consensus 169 ~ 169 (305)
+
T Consensus 83 s 83 (83)
T 4ddj_A 83 S 83 (83)
T ss_dssp -
T ss_pred c
Confidence 5
No 7
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=99.76 E-value=7.5e-19 Score=132.55 Aligned_cols=73 Identities=14% Similarity=0.292 Sum_probs=70.0
Q ss_pred CcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccc
Q psy4241 91 DVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAG 165 (305)
Q Consensus 91 ~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lg 165 (305)
..|.+|+++|++++++| +|.|+++|+++|+++|+.+|. .+++.|+.||++|+|.||++|.++.+|++||..++
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~-~~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~ik 74 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS-RWRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR 74 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH-HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcC
Confidence 46999999999999999 999999999999999999996 69999999999999999999999999999999875
No 8
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=99.75 E-value=9.1e-19 Score=133.89 Aligned_cols=79 Identities=23% Similarity=0.566 Sum_probs=73.4
Q ss_pred CCCcchhhHHHHHHHHHHhcccchH-HHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccccc
Q psy4241 89 GDDVCKICKNMVGQARDQLQSNETQ-QDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAGLC 167 (305)
Q Consensus 89 ~~~~C~~C~~vV~~v~~~L~~n~te-~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lglC 167 (305)
++..|.+|+++|+.+++++.+|.|+ ++|+++|+++|+.+|. .++.+|+.+|++|+|.|+++|. +++|++||+.+|+|
T Consensus 2 ~~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~-~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC 79 (81)
T 1n69_A 2 DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP-GMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFC 79 (81)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT-THHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSC
T ss_pred CCCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCC
Confidence 3568999999999999999999999 9999999999999997 6999999999999999999887 69999999999999
Q ss_pred cC
Q psy4241 168 NN 169 (305)
Q Consensus 168 ~~ 169 (305)
++
T Consensus 80 ~s 81 (81)
T 1n69_A 80 DE 81 (81)
T ss_dssp C-
T ss_pred CC
Confidence 74
No 9
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=99.74 E-value=5.8e-19 Score=140.27 Aligned_cols=79 Identities=20% Similarity=0.396 Sum_probs=74.5
Q ss_pred CCCCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcc---hhhhhHHHHHhhHHHHHHHHHcCCChhhhccc
Q psy4241 87 EDGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKV---IREGCDKLVDEFVPELIEVLSSQMNPDVVCSV 163 (305)
Q Consensus 87 ~~~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~---~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~ 163 (305)
..++..|.+|+++|++++++| |.|+++|+++|+++|+.||. . ++.+|+.+|++|+|.||++|.++++|++||+.
T Consensus 18 ~~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~-~ipf~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~ 94 (99)
T 2js9_A 18 GRSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFH-TIPFGTRECDHYVNSKVDPIIHELEGGTAPKDVCTK 94 (99)
T ss_dssp -CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGG-GSTTHHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHH
T ss_pred CCCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCC-cchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhh
Confidence 467889999999999999999 78999999999999999996 6 89999999999999999999999999999999
Q ss_pred ccccc
Q psy4241 164 AGLCN 168 (305)
Q Consensus 164 lglC~ 168 (305)
||+|+
T Consensus 95 L~lC~ 99 (99)
T 2js9_A 95 LNECP 99 (99)
T ss_dssp TTCCC
T ss_pred cCCCC
Confidence 99995
No 10
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.63 E-value=4.8e-17 Score=131.04 Aligned_cols=92 Identities=15% Similarity=0.228 Sum_probs=67.5
Q ss_pred hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcccchhhhhhhcCCCCCCCCCCC---CCCCCCcchHHHHHHHHHH
Q psy4241 195 KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAPAPKTSTPTK---DDNSDCKNCASFADLVTKK 271 (305)
Q Consensus 195 ~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~~~~~~~~~~~~~~~~~~~~~~---~~~~~C~~Ce~vV~~v~~~ 271 (305)
...|+.+|++|||.|+++|.++++|+.||+.+|+|++.....+ .+.+..+..+.... .++..|.+|+++|.|++++
T Consensus 8 ~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~-~~~i~~vv~~~~~~~~~~~~~~C~~Ce~~V~~ie~~ 86 (108)
T 3rfi_A 8 SMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHV-SSNIKTVVERETEGSSVGEAPLCTACEMAVVWMQNQ 86 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC-------------------------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccc-ccccccccccccccccCCCCCcChhHHHHHHHHHHH
Confidence 4469999999999999999999999999999999998664322 11222222211111 3688999999999999999
Q ss_pred HhhhchhhhhcCCCCc
Q psy4241 272 FNAASKQDVTNDPFGS 287 (305)
Q Consensus 272 L~~n~ted~~~~~~~~ 287 (305)
|++|+||+.|.++|++
T Consensus 87 L~~N~Te~eI~~~l~k 102 (108)
T 3rfi_A 87 LKQEGTKEKVLEYVNQ 102 (108)
T ss_dssp HTSHHHHHHHHHHHHH
T ss_pred HhcCchHHHHHHHHHH
Confidence 9999999999999886
No 11
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=99.36 E-value=1.7e-13 Score=105.85 Aligned_cols=78 Identities=19% Similarity=0.367 Sum_probs=70.0
Q ss_pred CCCCcchhhHHHHHHHHHHhcccchHHHHHHHHHhccCcCC--CcchhhhhHHHHHhhHHHHHHHHHcCCChhhhccccc
Q psy4241 88 DGDDVCKICKNMVGQARDQLQSNETQQDLKAVFEGSCNLVP--VKVIREGCDKLVDEFVPELIEVLSSQMNPDVVCSVAG 165 (305)
Q Consensus 88 ~~~~~C~~C~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP--~~~~~~~C~~lV~~Y~p~II~~L~~~~~P~~IC~~lg 165 (305)
.+...|.+|+++|+.++.++.+ +..+|++++++.|+.++ .++...+|+.+|++|++.||+.|+++.+|+.||+.|+
T Consensus 8 ~~~l~C~~C~~~Vk~~e~~i~~--~~~eie~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~ 85 (87)
T 3s64_A 8 SNVIVCEICKMAVKLIVPEADK--DLDQLEKEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLH 85 (87)
T ss_dssp CCTTHHHHHHHHHHHHTTCSSC--SSTTHHHHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHH
T ss_pred CCccchHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhc
Confidence 4568899999999999999876 44479999999999883 2456899999999999999999999999999999999
Q ss_pred cc
Q psy4241 166 LC 167 (305)
Q Consensus 166 lC 167 (305)
+|
T Consensus 86 ~C 87 (87)
T 3s64_A 86 AC 87 (87)
T ss_dssp CC
T ss_pred cC
Confidence 98
No 12
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.19 E-value=3.3e-12 Score=102.63 Aligned_cols=80 Identities=23% Similarity=0.505 Sum_probs=64.4
Q ss_pred ccccc-----ccchhh---hccCccccccCcCCCCcchhhhccc------c----CC---CCCCcchhhHHHHHHHHHHh
Q psy4241 49 SPECA-----RGQSFW---CEDLASAASCGATGHCIQAVWSHMK------V----KE---DGDDVCKICKNMVGQARDQL 107 (305)
Q Consensus 49 ~~~C~-----~gP~~w---Cq~l~pa~iC~~l~lC~~~~w~~~~------~----~~---~~~~~C~~C~~vV~~v~~~L 107 (305)
+.+|. |||.+| -+.+.|..+|+.+|+|......... + +. .++..|.+|+++|.+++.+|
T Consensus 8 ~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~~~~~~~C~~Ce~~V~~ie~~L 87 (108)
T 3rfi_A 8 SMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSSVGEAPLCTACEMAVVWMQNQL 87 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCcccccccccccccccccccccCCCCCcChhHHHHHHHHHHHH
Confidence 57786 999999 5778999999999999986431100 1 11 26788999999999999999
Q ss_pred cccchHHHHHHHHHhccCcCC
Q psy4241 108 QSNETQQDLKAVFEGSCNLVP 128 (305)
Q Consensus 108 ~~n~te~~I~~~L~~~C~~lP 128 (305)
++|.|+++|+++|+++|++||
T Consensus 88 ~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 88 KQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp TSHHHHHHHHHHHHHHHTTCC
T ss_pred hcCchHHHHHHHHHHHHhhCc
Confidence 999999999999999999998
No 13
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=98.95 E-value=1.8e-10 Score=114.07 Aligned_cols=90 Identities=14% Similarity=0.223 Sum_probs=62.7
Q ss_pred HHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcccchhhhhhhcCCCCCCCC----CCCCCCCCCcchHHHHHHHHHHH
Q psy4241 197 KKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAIDRLLLTAAPAPKTST----PTKDDNSDCKNCASFADLVTKKF 272 (305)
Q Consensus 197 ~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~~~~~~~~~~~~~~~~~~~----~~~~~~~~C~~Ce~vV~~v~~~L 272 (305)
.|+.+|++|++.|+++|.+++.|..||+.+|+|......+.. ..+..+.+++ ....++..|.+|||+|.|++++|
T Consensus 288 ~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l 366 (478)
T 1qdm_A 288 ECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVS-AGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQL 366 (478)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC----------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccc-ccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence 378899999999999999999999999999999987654331 2222222211 12345678999999999999999
Q ss_pred hhhchhhhhcCCCCc
Q psy4241 273 NAASKQDVTNDPFGS 287 (305)
Q Consensus 273 ~~n~ted~~~~~~~~ 287 (305)
++|+|++.|..++++
T Consensus 367 ~~n~t~~~I~~~~~~ 381 (478)
T 1qdm_A 367 AQNKTQDLILDYVNQ 381 (478)
T ss_dssp HTTCCHHHHHHHHHH
T ss_pred hccccHHHHHHHHHH
Confidence 999999999887765
No 14
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=98.44 E-value=1.4e-07 Score=70.54 Aligned_cols=42 Identities=26% Similarity=0.414 Sum_probs=37.6
Q ss_pred ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcc
Q psy4241 190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNN 231 (305)
Q Consensus 190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~ 231 (305)
.|+.+ ...|+.+|++|+|.|+++|.++++|+.||+.+|+|++
T Consensus 35 ~C~~lp~~~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~~ 80 (80)
T 3bqp_A 35 GCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPS 80 (80)
T ss_dssp HGGGSCGGGHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSCC
T ss_pred HHHhCCCccchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCCc
Confidence 57666 3469999999999999999999999999999999974
No 15
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=98.40 E-value=1.2e-07 Score=73.25 Aligned_cols=46 Identities=20% Similarity=0.380 Sum_probs=35.6
Q ss_pred ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcccchh
Q psy4241 190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNNAAID 235 (305)
Q Consensus 190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~~~~~ 235 (305)
.|+.+ ...|+.||++|+|.|+++|.++++|+.||+.+|+|++.++.
T Consensus 38 ~C~~lp~~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~~~~ 87 (91)
T 2qyp_A 38 MCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRHH 87 (91)
T ss_dssp HHHTSCSSTTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC------
T ss_pred HHHHCCCCcccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCcccc
Confidence 45555 24699999999999999999999999999999999997654
No 16
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=98.36 E-value=2.5e-07 Score=69.64 Aligned_cols=42 Identities=12% Similarity=0.210 Sum_probs=37.4
Q ss_pred ccccc---hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcc
Q psy4241 190 PTRRL---KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNN 231 (305)
Q Consensus 190 ~C~~l---~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~ 231 (305)
.|+.+ ...|+.||++|+|.|+++|.++.+|+.||+.+|+|++
T Consensus 34 ~C~~lp~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~~ 78 (78)
T 1nkl_A 34 VCDKLKILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICKE 78 (78)
T ss_dssp HHHHSCSTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSCC
T ss_pred HHhhCchhHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCCc
Confidence 46655 3569999999999999999999999999999999974
No 17
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=98.30 E-value=4.8e-07 Score=68.39 Aligned_cols=42 Identities=21% Similarity=0.430 Sum_probs=37.0
Q ss_pred ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcc
Q psy4241 190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNN 231 (305)
Q Consensus 190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~ 231 (305)
.|+.+ ...|+.+|++|+|.|+++|.++++|+.||+.+|+|++
T Consensus 37 ~C~~lp~~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~ 82 (83)
T 2gtg_A 37 MCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSG 82 (83)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC-
T ss_pred HHHHCCCcchhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCCC
Confidence 56666 3468999999999999999999999999999999985
No 18
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=98.28 E-value=4.7e-07 Score=68.03 Aligned_cols=40 Identities=8% Similarity=0.186 Sum_probs=36.1
Q ss_pred ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCC
Q psy4241 190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLC 229 (305)
Q Consensus 190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC 229 (305)
.|+.+ ...|+.||++|+|.|+++|.++++|+.||+.+|+|
T Consensus 34 ~C~~lp~~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 34 LCNKASGFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp HHTTCSSTTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHcCChHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 46655 35699999999999999999999999999999999
No 19
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=98.17 E-value=1.3e-06 Score=65.93 Aligned_cols=41 Identities=20% Similarity=0.509 Sum_probs=34.7
Q ss_pred ccccc----hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCcc
Q psy4241 190 PTRRL----KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCNN 231 (305)
Q Consensus 190 ~C~~l----~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~~ 231 (305)
.|+.+ ...|+.+|++|||.|+++|. +++|+.||+.+|+|++
T Consensus 37 ~C~~lp~~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~s 81 (81)
T 1n69_A 37 ECDRLGPGMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCDE 81 (81)
T ss_dssp HGGGGCTTHHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC-
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCCC
Confidence 56666 34699999999998888887 6999999999999974
No 20
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=98.05 E-value=2.1e-06 Score=64.79 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=32.7
Q ss_pred HHHHHHHHhhhchHHHHHhcC-CChHHHhhhcCCCcc
Q psy4241 196 KKKKRCLLTEETVTPKVLSSQ-MNPDVVCSVAGLCNN 231 (305)
Q Consensus 196 ~~ck~~V~~Y~~~Ii~~L~~~-~~P~~VC~~iglC~~ 231 (305)
..|+.+|++|+|.|+++|.++ .+|+.||+.+|+|++
T Consensus 47 ~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~s 83 (83)
T 4ddj_A 47 ASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCES 83 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCCc
Confidence 368999999999999999999 599999999999974
No 21
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=98.03 E-value=1.2e-06 Score=69.08 Aligned_cols=41 Identities=15% Similarity=0.271 Sum_probs=36.7
Q ss_pred ccccc-------hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCCc
Q psy4241 190 PTRRL-------KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLCN 230 (305)
Q Consensus 190 ~C~~l-------~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC~ 230 (305)
.|+.+ ...|+.||++|+|.||++|.++++|+.||+.+|+|+
T Consensus 52 ~C~~lp~~ipf~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 52 ECKKLFHTIPFGTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp HHHTGGGGSTTHHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHcCCCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 67766 235899999999999999999999999999999996
No 22
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=97.94 E-value=7.2e-06 Score=61.26 Aligned_cols=39 Identities=8% Similarity=0.011 Sum_probs=34.8
Q ss_pred cccccch----HHHHHHHHhhhchHHHHHhcCCChHHHhhhcC
Q psy4241 189 FPTRRLK----KKKKRCLLTEETVTPKVLSSQMNPDVVCSVAG 227 (305)
Q Consensus 189 ~~C~~l~----~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~ig 227 (305)
..|+.++ ..|+.||++|+|.|+++|.++.+|+.||+.++
T Consensus 32 ~vC~~l~~~~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~ik 74 (74)
T 1l9l_A 32 RVCRTGRSRWRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR 74 (74)
T ss_dssp HGGGSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcC
Confidence 4788883 36899999999999999999999999999875
No 23
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=97.85 E-value=4.3e-06 Score=82.67 Aligned_cols=86 Identities=22% Similarity=0.332 Sum_probs=63.4
Q ss_pred ccchhh---hccCccccccCcCCCCcchhhhccc--------------cCCCCCCcchhhHHHHHHHHHHhcccchHHHH
Q psy4241 54 RGQSFW---CEDLASAASCGATGHCIQAVWSHMK--------------VKEDGDDVCKICKNMVGQARDQLQSNETQQDL 116 (305)
Q Consensus 54 ~gP~~w---Cq~l~pa~iC~~l~lC~~~~w~~~~--------------~~~~~~~~C~~C~~vV~~v~~~L~~n~te~~I 116 (305)
||+.+| -+.+.|..+|..+|+|......... ....++..|.+|+++|.+++.+|++|.|+++|
T Consensus 296 yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I 375 (478)
T 1qdm_A 296 YGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLI 375 (478)
T ss_dssp THHHHHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred hhhHHHHhhhhccChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHH
Confidence 788887 5677899999999999876321100 01234578999999999999999999999999
Q ss_pred HHHHHhccCcCCCc--chhhhhHHH
Q psy4241 117 KAVFEGSCNLVPVK--VIREGCDKL 139 (305)
Q Consensus 117 ~~~L~~~C~~lP~~--~~~~~C~~l 139 (305)
..+++++|..+|.. .+.-.|..+
T Consensus 376 ~~~~~~~C~~~~~~~g~~~v~C~~~ 400 (478)
T 1qdm_A 376 LDYVNQLCNRLPSPMGESAVDCGSL 400 (478)
T ss_dssp HHHHHHHTTCBCCSSSCCEECGGGG
T ss_pred HHHHHHHhhccCCCCCeEEeecccc
Confidence 99999999999852 245678753
No 24
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=97.35 E-value=7.8e-05 Score=57.30 Aligned_cols=40 Identities=20% Similarity=0.301 Sum_probs=36.6
Q ss_pred ccccc-------hHHHHHHHHhhhchHHHHHhcCCChHHHhhhcCCC
Q psy4241 190 PTRRL-------KKKKKRCLLTEETVTPKVLSSQMNPDVVCSVAGLC 229 (305)
Q Consensus 190 ~C~~l-------~~~ck~~V~~Y~~~Ii~~L~~~~~P~~VC~~iglC 229 (305)
.|+++ ...|+.++++|.+.|++.|.++.+|++||+.+++|
T Consensus 41 ~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 41 GCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 68777 24699999999999999999999999999999998
No 25
>3s63_A Na-SLP-1, saposin-like protein; lipid-binding, lipid binding protein; 2.70A {Necator americanus}
Probab=96.70 E-value=0.0056 Score=47.88 Aligned_cols=79 Identities=16% Similarity=0.331 Sum_probs=71.2
Q ss_pred CcchhhHHHHHHHHHHhccc-chHHHHHHHHHhccCcCCCcchhhhhHHHHHhhHHHHHHHHHcCC-Chhhhcccccccc
Q psy4241 91 DVCKICKNMVGQARDQLQSN-ETQQDLKAVFEGSCNLVPVKVIREGCDKLVDEFVPELIEVLSSQM-NPDVVCSVAGLCN 168 (305)
Q Consensus 91 ~~C~~C~~vV~~v~~~L~~n-~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~~Y~p~II~~L~~~~-~P~~IC~~lglC~ 168 (305)
..|+.|..+.+-+-..+..+ .+...+...|...|...+. |+..|-.++...++.|++.+..+- +|-.+|..+.-|.
T Consensus 5 ~nCd~Cv~VL~cVfGhfgksV~SkR~L~~kL~htCKRyfq--YRrrCL~~~K~n~~~If~~mqpg~ydPi~~C~e~qEC~ 82 (117)
T 3s63_A 5 ETCDLCQIALRTVFGHFGGNIPSRRKLVHQLKHECKRHFN--YRRRCLLLMKVNSDLIFREMTDGSFKPMEVCLIMRECN 82 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHTTCTT--THHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHTTSSC
T ss_pred cccHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhHHHHHHhcCCCCCCchhHHHHHHHhc
Confidence 35999999999998888776 5788999999999999985 999999999999999999998866 9999999999998
Q ss_pred Ccc
Q psy4241 169 NAA 171 (305)
Q Consensus 169 ~~~ 171 (305)
.-.
T Consensus 83 ~~~ 85 (117)
T 3s63_A 83 PHD 85 (117)
T ss_dssp TTS
T ss_pred ccC
Confidence 654
No 26
>2w50_A ArMet-like protein 1; MANF, CDNF, saposin, secreted, ER stress, alternative splicing, hormone, growth factor, neurotrophic factor; 1.60A {Homo sapiens}
Probab=84.69 E-value=1.2 Score=34.90 Aligned_cols=73 Identities=15% Similarity=0.235 Sum_probs=56.0
Q ss_pred cchhhHHHHHHHHHHhccc---chHHHHHHHHHhccCcCCCcchhhhhHHHHH------hhHHHHHHHHHcCCChhhhcc
Q psy4241 92 VCKICKNMVGQARDQLQSN---ETQQDLKAVFEGSCNLVPVKVIREGCDKLVD------EFVPELIEVLSSQMNPDVVCS 162 (305)
Q Consensus 92 ~C~~C~~vV~~v~~~L~~n---~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~------~Y~p~II~~L~~~~~P~~IC~ 162 (305)
.|.+|..+++.+.+.|... .....|+++|.+.|...-+ .-...|-.+-. .-...+.+-|.-++.++.||.
T Consensus 5 ~CEVCvk~l~~f~~sl~~~~~~~~~~~IE~~l~~~C~~~k~-KEnr~CYyiga~~dsat~il~evskPlS~~mP~~KiCe 83 (102)
T 2w50_A 5 DCEVCKEFLNRFYKSLIDRGVNFSLDTIEKELISFCLDTKG-KENRLCYYLGATKDAATKILSEVTRPMSVHMPAMKICE 83 (102)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTCCH-HHHHHHHHTTCSTTSCHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CchhhHHHHHHHHHhcchhccccCHHHHHHHHHHHHhhccC-CccceeEecCCchHHHHHHHHHhccccccCCCHHHHHH
Confidence 6999999999999988774 2678999999999999865 35667765532 234456667777889999998
Q ss_pred ccc
Q psy4241 163 VAG 165 (305)
Q Consensus 163 ~lg 165 (305)
.+.
T Consensus 84 kLk 86 (102)
T 2w50_A 84 KLK 86 (102)
T ss_dssp HHH
T ss_pred HHh
Confidence 663
No 27
>2w51_A Protein arMet; MANF, CDNF, saposin, secreted, ER stress, phosphoprotein, neurotrophic factor, sialic acid, glycoprotein, growth factor, hormone; 2.80A {Homo sapiens} PDB: 2kvd_A 2rqy_A 2kve_A
Probab=71.63 E-value=5.5 Score=33.35 Aligned_cols=73 Identities=12% Similarity=0.276 Sum_probs=56.8
Q ss_pred CcchhhHHHHHHHHHHhccc---chHHHHHHHHHhccCcCCCcchhhhhHHHHH------hhHHHHHHHHHcCCChhhhc
Q psy4241 91 DVCKICKNMVGQARDQLQSN---ETQQDLKAVFEGSCNLVPVKVIREGCDKLVD------EFVPELIEVLSSQMNPDVVC 161 (305)
Q Consensus 91 ~~C~~C~~vV~~v~~~L~~n---~te~~I~~~L~~~C~~lP~~~~~~~C~~lV~------~Y~p~II~~L~~~~~P~~IC 161 (305)
..|.+|..+++.+.+.|... .....|+++|.+.|...-+ .-...|-.+-. .-...+.+-|.-++.++.||
T Consensus 4 ~~CEVCv~~l~~f~~sl~~~~~~~~~~~IE~~l~~~C~~~k~-KEnr~CYyiga~~dsAt~il~evs~PlS~~mP~~KiC 82 (158)
T 2w51_A 4 GDCEVCISYLGRFYQDLKDRDVTFSPATIENELIKFCREARG-KENRLCYYIGATDDAATKIINEVSKPLAHHIPVEKIC 82 (158)
T ss_dssp TSSHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTCCH-HHHHHHHHTTCSSSCCCGGGHHHHHHHHTTCCHHHHH
T ss_pred cCCchhHHHHHHHHHhccccccccCHHHHHHHHHHHHhhccC-CccceeEecCCchHHHHHHHHHhccccccCCCHHHHH
Confidence 46999999999999988764 3678999999999999865 35667765533 24456777788899999999
Q ss_pred ccc
Q psy4241 162 SVA 164 (305)
Q Consensus 162 ~~l 164 (305)
..+
T Consensus 83 ekL 85 (158)
T 2w51_A 83 EKL 85 (158)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 28
>2dwf_A Pulmonary surfactant-associated protein B; mini-B, SP-B, surfactant protein B, lipid associated protein, surface active protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 2jou_A
Probab=57.08 E-value=6.4 Score=24.30 Aligned_cols=17 Identities=12% Similarity=0.649 Sum_probs=14.0
Q ss_pred chhhHHHHHHHHHHhcc
Q psy4241 93 CKICKNMVGQARDQLQS 109 (305)
Q Consensus 93 C~~C~~vV~~v~~~L~~ 109 (305)
|.+|+.+++.++.++-.
T Consensus 1 CwlCrtlikriq~vIPk 17 (34)
T 2dwf_A 1 CWLCRALIKRIQAMIPK 17 (34)
T ss_dssp CCCHHHHHHHHHHHCTT
T ss_pred ChhHHHHHHHHHhhcCC
Confidence 78899999988887755
No 29
>3doe_B ADP-ribosylation factor-like protein 2-binding protein; binder of ARL2, small GTPase, effector, complex structure, GTP-binding, lipoprotein; HET: GTP; 2.25A {Homo sapiens} PDB: 3dof_B* 2k9a_A 2k0s_A
Probab=36.64 E-value=44 Score=28.09 Aligned_cols=68 Identities=10% Similarity=0.095 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHhccCcCCCcc-hhhhhHHHHHhhHHHHHHHHH-------cCCChhhhcccc
Q psy4241 97 KNMVGQARDQLQSNETQQDLKAVFEGSCNLVPVKV-IREGCDKLVDEFVPELIEVLS-------SQMNPDVVCSVA 164 (305)
Q Consensus 97 ~~vV~~v~~~L~~n~te~~I~~~L~~~C~~lP~~~-~~~~C~~lV~~Y~p~II~~L~-------~~~~P~~IC~~l 164 (305)
-.+|+.++++|.++..+.-+..++++-|..+-... -+-....+=.+|...+=++|. .+.+.++.-..+
T Consensus 24 D~VVG~lEDil~sp~f~~~~~~Fme~~c~vFdd~EENKLeYT~I~~eY~~LVE~~Le~~L~e~i~Gfsme~F~~~l 99 (165)
T 3doe_B 24 DAVVGYLEDIIMDDEFQLLQRNFMDKYYLEFEDTEENKLIYTPIFNEYISLVEKYIEEQLLQRIPEFNMAAFTTTL 99 (165)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHGGGCCSSSSBCTTHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCHhHHHHHHHHHHhCCccCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 46899999999999999999999999999987521 112444444444443333332 255666655443
Done!