BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4246
(328 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Paratuberculosis
Length = 291
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
++TGAN+G+G TAR LA G VI+A R K A + + Q EL+L L
Sbjct: 20 VITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDL 74
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLT 239
SV++FA+ ++L+ NAG+ + ++ T DGFE+ NHL HF LT
Sbjct: 75 SSVRRFADGVSGA----DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALT 123
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 15/127 (11%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL A+VTG + G+GF A+ LA GC V++A R+L++A++A K LTEK + +A
Sbjct: 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQK-LTEKYGVETMAF 76
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV--------FGLGFSHTEDGFETTFQVN 231
++ + VKK E ++KF L+ +V AG+ F L D F +VN
Sbjct: 77 RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPL------DEFRQVIEVN 130
Query: 232 HLAHFYL 238
+Y+
Sbjct: 131 LFGTYYV 137
>pdb|1TK7|A Chain A, Nmr Structure Of Ww Domains (Ww3-4) From Suppressor Of
Deltex
Length = 88
Score = 65.1 bits (157), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 12 DSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPRTGVKKKVS----GDLPLGWEKSVS 67
D+ LP GWE+++ +D VY+VNH TQW PRT ++VS G LP GWE +
Sbjct: 8 DALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQ-GQEVSLINEGPLPPGWEIRYT 66
Query: 68 EDGKITFYNKDTHVKTYTDPR 88
G+ F + +T T+ DPR
Sbjct: 67 AAGERFFVDHNTRRTTFEDPR 87
>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1DOH|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1G0N|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0N|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0O|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|C Chain C, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|D Chain D, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
Length = 283
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILA-CRSLDKANDAISKILTEKPSAQCIAMELNLC 184
A+VTGA GIG E A L GC+VI+ S + A + ++ I A C+ + N+
Sbjct: 32 ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV--KANVG 89
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTED----GFETTFQVNHLAHFYLTL 240
++ + + EE K F L+I+ N+GV + F H +D F+ F +N F++
Sbjct: 90 VVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTINTRGQFFVAR 147
Query: 241 QLENALIKGAKLF 253
+ L G +L
Sbjct: 148 EAYKHLEIGGRLI 160
>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
pdb|1YBV|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
Length = 283
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILA-CRSLDKANDAISKILTEKPSAQCIAMELNLC 184
A+VTGA GIG E A L GC+VI+ S + A + ++ I A C+ + N+
Sbjct: 32 ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV--KANVG 89
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTED----GFETTFQVNHLAHFYLTL 240
++ + + EE K F L+I+ N+GV + F H +D F+ F +N F++
Sbjct: 90 VVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTINTRGQFFVAR 147
Query: 241 QLENALIKGAKLF 253
+ L G +L
Sbjct: 148 EAYKHLEIGGRLI 160
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTG N GIGFE + L+ +G V+L CR + K ++A+ K L + +L++
Sbjct: 15 AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEK-LKNSNHENVVFHQLDVTD 73
Query: 186 -LKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFE 225
+ ++ A+ + F L+ILV NAGV GFS D F+
Sbjct: 74 PIATMSSLADFIKTHFGKLDILVNNAGV--AGFSVDADRFK 112
>pdb|2KXQ|A Chain A, Solution Structure Of Smurf2 Ww2 And Ww3 Bound To Smad7
Py Motif Containing Peptide
Length = 90
Score = 55.5 bits (132), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 9 PDSDSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPR-----TGVKKKVSGDLPLGWE 63
P S +LP G+E+R T G VY+++ T + W PR + + + G LP GWE
Sbjct: 2 PLGGSPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWE 61
Query: 64 KSVSEDGKITFYNKDTHVKTYTDPRI 89
+ G++ F + + +TDPR+
Sbjct: 62 IRNTATGRVYFVDHNNRTTQFTDPRL 87
>pdb|2F21|A Chain A, Human Pin1 Fip Mutant
Length = 162
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 14 EDELPPGWEERVTADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ADG VYY NH T +QW P
Sbjct: 4 EEKLPPGWEKRMSADGRVYYFNHITNASQWERP 36
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDP 87
LP GWEK +S DG++ ++N T+ + P
Sbjct: 7 LPPGWEKRMSADGRVYYFNHITNASQWERP 36
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 121 LSNYNAIVTGANTGIGFETARSL--ALHG-CRVILACRSLDKANDAISKILTEKPSAQCI 177
L+ ++TGA+ GIG TA A +G ++ILA R L+K + I E P+A+
Sbjct: 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAG-VFG---LGFSHTEDGFETTFQVNHL 233
+L++ + + +K F E ++F+ ++ILV NAG G +G TED + F N
Sbjct: 91 VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATED-IQDVFDTNVT 149
Query: 234 AHFYLT------LQLENA--LIKGAKLFARQQGAATSIYCATSL 269
A +T Q +N+ ++ + R SIYCA+
Sbjct: 150 ALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKF 193
>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|B Chain B, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|C Chain C, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|D Chain D, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|E Chain E, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|F Chain F, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|G Chain G, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|H Chain H, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
Length = 291
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 94 EEKENPLDIRQKYDHSTKALQILHGRDLSNYNAIVTGANTGIGFETARSLALHGCRVILA 153
E NPL Q D + K + L G+ N ++TG ++GIG + + A G + +A
Sbjct: 25 ESLXNPLP--QFEDPNYKGSEKLKGK-----NVLITGGDSGIGRAVSIAFAKEGANIAIA 77
Query: 154 CRSLDKANDAI-SKILTEKPSAQCIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAG- 211
LD+ DA +K EK +C+ + +L + K +E ++ SLNILV N
Sbjct: 78 Y--LDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ 135
Query: 212 ---VFGLGFSHTEDGFETTFQVNHLAHFYLT------LQLENALIKGAKLFARQQGAATS 262
GL + E E TF++N ++F++T L+ + +I A + A +
Sbjct: 136 QYPQQGLEYITAEQ-LEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLI 194
Query: 263 IYCAT---------SLDLSLPVSGSYFNNCCRCP 287
Y AT SL SL G N P
Sbjct: 195 DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGP 228
>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
pdb|3IOY|B Chain B, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
+D + A VTG G+G R L GC+V +A D + A++ + E + +
Sbjct: 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++L++ + K A+E + +F ++IL NAGV
Sbjct: 64 VQLDVASREGFKMAADEVEARFGPVSILCNNAGV 97
>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|B Chain B, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|C Chain C, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|D Chain D, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|E Chain E, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|F Chain F, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|G Chain G, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|H Chain H, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
Length = 291
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 98 NPLDIRQKYDHSTKALQILHGRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSL 157
NPL Q D + K + L G+ N ++TG ++GIG + + A G + +A L
Sbjct: 29 NPLP--QFEDPNYKGSEKLKGK-----NVLITGGDSGIGRAVSIAFAKEGANIAIAY--L 79
Query: 158 DKANDAI-SKILTEKPSAQCIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAG----V 212
D+ DA +K EK +C+ + +L + K +E ++ SLNILV N
Sbjct: 80 DEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQ 139
Query: 213 FGLGFSHTEDGFETTFQVNHLAHFYLT------LQLENALIKGAKLFARQQGAATSIYCA 266
GL + E E TF++N ++F++T L+ + +I A + A + Y A
Sbjct: 140 QGLEYITAEQ-LEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSA 198
Query: 267 T---------SLDLSLPVSGSYFNNCCRCP 287
T SL SL G N P
Sbjct: 199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGP 228
>pdb|1I5H|W Chain W, Solution Structure Of The Rnedd4 Wwiii Domain-Renac Bp2
Peptide Complex
Length = 50
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 10 DSDSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
DS+ LPPGWEER DG V+++NH + TQW PR
Sbjct: 5 DSNDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPR 42
Score = 34.7 bits (78), Expect = 0.070, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
G LP GWE+ DG++ F N + + DPR+
Sbjct: 10 GPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRM 43
>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon
Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp
Length = 235
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A++TGA+ GIG AR+LA G + L RS+D+ + I+ L ++ + L++ +
Sbjct: 5 AVITGASRGIGEAIARALARDGYALALGARSVDRL-EKIAHELMQEQGVEVFYHHLDVSK 63
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
+SV++F+++ ++F ++++V NAG+
Sbjct: 64 AESVEEFSKKVLERFGDVDVVVANAGL 90
>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
pdb|3TN7|B Chain B, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
Length = 257
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A++TGA+ GIG AR+LA G + L RS+D+ + I+ L ++ + L++ +
Sbjct: 27 AVITGASRGIGEAIARALARDGYALALGARSVDRL-EKIAHELMQEQGVEVFYHHLDVSK 85
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
+SV++F+++ ++F ++++V NAG+
Sbjct: 86 AESVEEFSKKVLERFGDVDVVVANAGL 112
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A++TG+ GIG A + G RV +A +L+ A ++I P+A IA
Sbjct: 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIA-- 57
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHFYL 238
L++ S+ + E ++ S++ILV NA +F L T + ++ F +N ++
Sbjct: 58 LDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFM 117
Query: 239 TLQLENALIKGAKL-----FARQQG----AATSIYCAT 267
+ A+I G + A Q G A +YCAT
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCAT 155
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
+S A++TG+++GIG A A G ++L R +D+ ++A ++ L EK + + +
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEA-ARSLKEKFGVRVLEVA 63
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHT-EDGFETTFQVNHLAHFYLT 239
+++ + V E + F +ILV NAG G + T + + +Q H
Sbjct: 64 VDVATPEGVDAVVESVRSSFGGADILVNNAGT---GSNETIMEAADEKWQFYWELHVMAA 120
Query: 240 LQLENALIKGAKLFARQQGA 259
++L L+ G + AR GA
Sbjct: 121 VRLARGLVPGMR--ARGGGA 138
>pdb|2JO9|A Chain A, Mouse Itch 3rd Ww Domain Complex With The Epstein-Barr
Virus Latent Membrane Protein 2a Derived Peptide
Eeppppyed
pdb|1YIU|A Chain A, Itch E3 Ubiquitin Ligase Ww3 Domain
Length = 37
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPRT 48
LPPGWE+R ++G VY+VNH T TQW PR+
Sbjct: 6 LPPGWEKRTDSNGRVYFVNHNTRITQWEDPRS 37
Score = 38.9 bits (89), Expect = 0.003, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
G LP GWEK +G++ F N +T + + DPR
Sbjct: 4 GPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPR 36
>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|B Chain B, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|C Chain C, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|D Chain D, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
Length = 250
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRS---LDKANDAISKILTEKPSAQCIAMELN 182
AI+TGA+ GIG A LA G RV+L RS L+K +D I + + K + I + L+
Sbjct: 10 AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXR--SNKHVQEPIVLPLD 67
Query: 183 LCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG-FSHTEDGFETTFQVNHLAHF 236
+ ++ +K+ +++ILV A F G S D F ++N +A +
Sbjct: 68 ITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDNFRKIXEINVIAQY 122
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
+S A++TG+++GIG A A G ++L R +D+ ++A ++ L EK + + +
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEA-ARSLKEKFGVRVLEVA 63
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAG 211
+++ + V E + F +ILV NAG
Sbjct: 64 VDVATPEGVDAVVESVRSSFGGADILVNNAG 94
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILA-CRSLDKANDAISKILTEKPSAQCIAMELNLC 184
A+VTG+ GIG A L G +V++ S A +S+I + + IA++ ++
Sbjct: 21 ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI--KALGSDAIAIKADIR 78
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSH----TEDGFETTFQVNHLAHFYLTL 240
++ + K ++ F L+I V N+GV + F H TE+ F+ F +N F++
Sbjct: 79 QVPEIVKLFDQAVAHFGHLDIAVSNSGV--VSFGHLKDVTEEEFDRVFSLNTRGQFFVAR 136
Query: 241 QLENALIKGAKLFARQQGAATSIYCATSLDLSLP 274
+ L +G ++ TS D S+P
Sbjct: 137 EAYRHLTEGGRIVLTSSN--------TSKDFSVP 162
>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From
Salmonella Enterica Subsp. Enterica Serovar Typhi Str.
Ct18
Length = 258
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEK-PSAQCIAM 179
L N +VTGA+ GIG E A + A +G VIL R+ +K I E+ Q +
Sbjct: 12 LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG-LGFSHTEDG--FETTFQVNHLAHF 236
+L C + ++ A+ + L+ ++ NAG+ G +G +D ++ QVN A F
Sbjct: 72 DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNATF 131
Query: 237 YLT 239
LT
Sbjct: 132 MLT 134
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILA-CRSLDKANDAISKILTEKPSAQCIAMELNLC 184
A+VTG+ GIG A L G +V++ S A +S+I + + IA++ ++
Sbjct: 21 ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI--KALGSDAIAIKADIR 78
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSH----TEDGFETTFQVNHLAHFYLTL 240
++ + K ++ F L+I V N+GV + F H TE+ F+ F +N F++
Sbjct: 79 QVPEIVKLFDQAVAHFGHLDIAVSNSGV--VSFGHLKDVTEEEFDRVFSLNTRGQFFVAR 136
Query: 241 QLENALIKGAKLFARQQGAATSIYCATSLDLSLP 274
+ L +G ++ TS D S+P
Sbjct: 137 EAYRHLTEGGRIVLTSSN--------TSKDFSVP 162
>pdb|2JOC|A Chain A, Mouse Itch 3rd Domain Phosphorylated In T30
Length = 37
Score = 48.9 bits (115), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPRT 48
LPPGWE+R ++G VY+VNH T QW PR+
Sbjct: 6 LPPGWEKRTDSNGRVYFVNHNTRIXQWEDPRS 37
Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
G LP GWEK +G++ F N +T + + DPR
Sbjct: 4 GPLPPGWEKRTDSNGRVYFVNHNTRIXQWEDPR 36
>pdb|2YSG|A Chain A, Solution Structure Of The Ww Domain From The Human
Syntaxin- Binding Protein 4
Length = 40
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 11 SDSEDELPPGWEERVTADGCVYYVNHATEGTQWTHP 46
S LP GWEE TADG Y++NH T+ T W HP
Sbjct: 2 SSGSSGLPYGWEEAYTADGIKYFINHVTQTTSWIHP 37
>pdb|1WMV|A Chain A, Solution Structure Of The Second Ww Domain Of Wwox
Length = 54
Score = 48.1 bits (113), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 51 KKKVSGDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRIVFAKEEKENP 99
+K+V+GDLP GWE+ E+G++ F + TY DPR+ F + +NP
Sbjct: 5 RKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLAFTVD--DNP 51
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 16 ELPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
+LP GWE+ +G V++V+H + T + PR
Sbjct: 11 DLPYGWEQETDENGQVFFVDHINKRTTYLDPR 42
>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
Length = 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L + A +TG +GIGF A HGC ++A RSL + A K L +C+ +
Sbjct: 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARK-LAGATGRRCLPLS 83
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILV 207
+++ +V ++ K+F ++IL+
Sbjct: 84 MDVRAPPAVMAAVDQALKEFGRIDILI 110
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 126 AIVTGANTGIGFETARSLALHGCR-----VILACRSLDKANDAISKILTEKPSAQCIAME 180
A+VTGAN GIG AR L CR V+L R + + A+ ++ E S + +
Sbjct: 5 ALVTGANRGIGLAIAREL----CRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRF--HQ 58
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGF-SHTEDGFETTFQVNHLAHFYLT 239
L++ L+S++ + +K++ LN+LV NA V F S F+ ++ +F+ T
Sbjct: 59 LDIDDLQSIRALRDFLRKEYGGLNVLVNNAAV---AFKSDDPMPFDIKAEMTLKTNFFAT 115
Query: 240 LQLENALIKGAKLFAR 255
+ N L+ K R
Sbjct: 116 RNMCNELLPIMKPHGR 131
>pdb|2ZQV|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ + G VYY NH T +QW P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYANHITNASQWERP 37
>pdb|2ZQS|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ + G VYY NH T +QW P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase
20beta-Hydroxysteroid Dehydrogenase
Length = 288
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 126 AIVTGANTGIGFETARSLALHGCR-----VILACRSLDKANDAISKILTEKPSAQCIAME 180
A+VTGAN GIGF R L CR V+L R + + A+ ++ E S + +
Sbjct: 7 ALVTGANKGIGFAIVRDL----CRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRF--HQ 60
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTL 240
L++ L+S++ + +K++ L++LV NA + FQ+++ F++
Sbjct: 61 LDIIDLQSIRALCDFLRKEYGGLDVLVNNAAI--------------AFQLDNPTPFHIQA 106
Query: 241 QL 242
+L
Sbjct: 107 EL 108
>pdb|1ZCN|A Chain A, Human Pin1 Ng Mutant
Length = 161
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 14 EDELPPGWEERVTADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ +G VYY NH T +QW P
Sbjct: 4 EEKLPPGWEKRMS-NGRVYYFNHITNASQWERP 35
>pdb|1PIN|A Chain A, Pin1 Peptidyl-Prolyl Cis-Trans Isomerase From Homo
Sapiens
pdb|1NMV|A Chain A, Solution Structure Of Human Pin1
Length = 163
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ + G VYY NH T +QW P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
>pdb|2ZQT|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ + G VYY NH T +QW P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
>pdb|2ZR5|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ + G VYY NH T +QW P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
pdb|3F1L|B Chain B, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
Length = 252
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 119 RDLSNYNAI-VTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKP-SAQC 176
+DL N I VTGA+ GIG E A + A +G VIL R+ +K S I E Q
Sbjct: 7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 66
Query: 177 IAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDG---FETTFQVNHL 233
++L C ++ ++ A+ + L+ ++ NAG+ G +E ++ QVN
Sbjct: 67 FILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVN 126
Query: 234 AHFYLT 239
A F LT
Sbjct: 127 ATFMLT 132
>pdb|1F8A|B Chain B, Structural Basis For The Phosphoserine-Proline
Recognition By Group Iv Ww Domains
Length = 167
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ + G VYY NH T +QW P
Sbjct: 8 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 41
>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3F5Q|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3GZ4|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
pdb|3GZ4|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
Length = 262
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 119 RDLSNYNAI-VTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKP-SAQC 176
+DL N I VTGA+ GIG E A + A +G VIL R+ +K S I E Q
Sbjct: 9 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 68
Query: 177 IAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDG---FETTFQVNHL 233
++L C + ++ A+ + L+ ++ NAG+ G +E ++ QVN
Sbjct: 69 FILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVN 128
Query: 234 AHFYLT 239
A F LT
Sbjct: 129 ATFMLT 134
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 117 HGRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQC 176
H LS A+VTGA+ GIG AR L G RV+L R ++K +I+ A+
Sbjct: 23 HMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAES 82
Query: 177 IAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV--FGLGFSHTEDGFE--TTFQVNH 232
A +L+ ++ FA ++LV NAGV FG G HT E VN
Sbjct: 83 HACDLS--HSDAIAAFATGVLAAHGRCDVLVNNAGVGWFG-GPLHTMKPAEWDALIAVNL 139
Query: 233 LAHFYLTLQLENALI 247
A + L A+I
Sbjct: 140 KAPYLLLRAFAPAMI 154
>pdb|2ZR4|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ + G VYY NH T QW P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNAAQWERP 37
>pdb|2LAW|A Chain A, Structure Of The Second Ww Domain From Human Yap In
Complex With A Human Smad1 Derived Peptide
Length = 38
Score = 46.2 bits (108), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 14 EDELPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
E LP GWE+ +T DG +YY+NH + T W PR
Sbjct: 4 EGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPR 37
Score = 37.7 bits (86), Expect = 0.008, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 54 VSGDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
+ G LP GWE+++++DG+I + N ++ DPR+
Sbjct: 3 MEGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRL 38
>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3F5S|B Chain B, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3GY0|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301 Complexed With Nadp
Length = 255
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 119 RDLSNYNAI-VTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKP-SAQC 176
+DL N I VTGA+ GIG E A + A +G VIL R+ +K S I E Q
Sbjct: 5 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 64
Query: 177 IAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDG---FETTFQVNHL 233
++L C ++ ++ A+ + L+ ++ NAG+ G +E ++ Q+N
Sbjct: 65 FILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVN 124
Query: 234 AHFYLT 239
A F LT
Sbjct: 125 ATFMLT 130
>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate.
pdb|3IAH|B Chain B, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate
Length = 256
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKP-SAQCIAM 179
L N +VTGA+ GIG E A + A +G VIL R+ +K I E+ Q +
Sbjct: 13 LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG-LGFSHTEDG--FETTFQVNHLAHF 236
+L C + ++ A+ + L+ ++ NAG+ G +G +D ++ QVN A F
Sbjct: 73 DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVNATF 132
>pdb|1WR3|A Chain A, Solution Structure Of The First Ww Domain Of Nedd4-2
Length = 36
Score = 45.8 bits (107), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 19/30 (63%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHP 46
LPPGWEE+V G YYVNH TQW P
Sbjct: 5 LPPGWEEKVDNLGRTYYVNHNNRSTQWHRP 34
>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|B Chain B, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|C Chain C, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|D Chain D, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
Length = 283
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A++TGA +GIG TA +LA G V R+ + + +I+ Q IA+E ++
Sbjct: 31 ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIV--GAGGQAIALEADVSD 88
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTED----GFETTFQVNHLAHFYLTLQ 241
+ + KF L+I+V NAG+ G+ ++ +D ++ T VN L +LTL
Sbjct: 89 ELQXRNAVRDLVLKFGHLDIVVANAGINGV-WAPIDDLKPFEWDETIAVN-LRGTFLTLH 146
Query: 242 LENALIK 248
L +K
Sbjct: 147 LTVPYLK 153
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 126 AIVTGANTGIGFETARSLA-LHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLC 184
A+VTG N GIG R L L V+L R + + A+ ++ E S + +L++
Sbjct: 7 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF--HQLDID 64
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGV 212
L+S++ + +K++ L++LV NAG+
Sbjct: 65 DLQSIRALRDFLRKEYGGLDVLVNNAGI 92
>pdb|2DJY|A Chain A, Solution Structure Of Smurf2 Ww3 Domain-Smad7 Py Peptide
Complex
Length = 42
Score = 45.4 bits (106), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LPPGWE R TA G VY+V+H TQ+T PR
Sbjct: 8 LPPGWEIRNTATGRVYFVDHNNRTTQFTDPR 38
Score = 34.7 bits (78), Expect = 0.082, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 55 SGDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
SG LP GWE + G++ F + + +TDPR+
Sbjct: 5 SGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRL 39
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 126 AIVTGANTGIGFETARSLA-LHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLC 184
A+VTG N GIG R L L V+L R + + A+ ++ E S + +L++
Sbjct: 7 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF--HQLDID 64
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGV 212
L+S++ + +K++ L++LV NAG+
Sbjct: 65 DLQSIRALRDFLRKEYGGLDVLVNNAGI 92
>pdb|2LTZ|A Chain A, Smurf2 Ww3 Domain In Complex With A Smad7 Derived
Peptide
Length = 37
Score = 45.4 bits (106), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LPPGWE R TA G VY+V+H TQ+T PR
Sbjct: 3 LPPGWEIRNTATGRVYFVDHNNRTTQFTDPR 33
Score = 32.7 bits (73), Expect = 0.28, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
G LP GWE + G++ F + + +TDPR+
Sbjct: 1 GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRL 34
>pdb|2LTV|A Chain A, Yap Ww2 In Complex With A Smad7 Derived Peptide
Length = 36
Score = 45.4 bits (106), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LP GWE+ +T DG +YY+NH + T W PR
Sbjct: 3 LPDGWEQAMTQDGEIYYINHKNKTTSWLDPR 33
Score = 37.7 bits (86), Expect = 0.009, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
G LP GWE+++++DG+I + N ++ DPR+
Sbjct: 1 GPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRL 34
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
AI+TGA GIG E A + A G V+++ + D AN + +I ++ Q A ++
Sbjct: 14 AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI--QQLGGQAFACRCDITS 71
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGVFGLG-FSHTEDGFETTFQVNHLAHFYLT 239
+ + A+ K ++ILV NAG G F F +++N + F+L+
Sbjct: 72 EQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLS 126
>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF1|B Chain B, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF2|A Chain A, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|B Chain B, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|C Chain C, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|D Chain D, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
Length = 265
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DLS A+VTG ++GIG T L G V R ++ A S + P A+ A
Sbjct: 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAG 211
++ V+ FAE ++ +ILV NAG
Sbjct: 65 VCDVLDALQVRAFAEACERTLGCASILVNNAG 96
>pdb|2DMV|A Chain A, Solution Structure Of The Second Ww Domain Of Itchy
Homolog E3 Ubiquitin Protein Ligase (Itch)
Length = 43
Score = 45.1 bits (105), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 11 SDSEDELPPGWEERVTADGCVYYVNHATEGTQWTHP 46
S LPPGWE+RV G VYYV+H + T W P
Sbjct: 2 SSGSSGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRP 37
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL+ A+VTGA G+G AR+L G V L +K + L + +
Sbjct: 7 DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKE-----LAAELGERIFVF 61
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFY 237
NL ++VK ++ +++ ++ILV NAG+ GL +++ ++ VN + F
Sbjct: 62 PANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFN 121
Query: 238 LTLQLENALIK 248
LT +L + +++
Sbjct: 122 LTRELTHPMMR 132
>pdb|2LTX|A Chain A, Smurf1 Ww2 Domain In Complex With A Smad7 Derived
Peptide
Length = 35
Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LPPGWE R T G +Y+V+H TQ+T PR
Sbjct: 3 LPPGWEVRSTVSGRIYFVDHNNRTTQFTDPR 33
Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
G LP GWE + G+I F + + +TDPR+
Sbjct: 1 GPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRL 34
>pdb|2LB1|A Chain A, Structure Of The Second Domain Of Human Smurf1 In
Complex With A Human Smad1 Derived Peptide
Length = 35
Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LPPGWE R T G +Y+V+H TQ+T PR
Sbjct: 4 LPPGWEVRSTVSGRIYFVDHNNRTTQFTDPR 34
Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
G LP GWE + G+I F + + +TDPR+
Sbjct: 2 GPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRL 35
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
Length = 247
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA+ GIGFE A +LA G V+ S A + EK + + LN+
Sbjct: 8 ALVTGASRGIGFEVAHALASKGATVVGTATSQASA-EKFENSXKEK-GFKARGLVLNISD 65
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHF 236
++S++ F E + + +++ILV NAG+ L +ED +++ N + F
Sbjct: 66 IESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSIF 118
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL+ A+VTGA G+G AR+L G V L +K + L + +
Sbjct: 4 DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKE-----LAAELGERIFVF 58
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFY 237
NL ++VK ++ +++ ++ILV NAG+ GL +++ ++ VN + F
Sbjct: 59 PANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFN 118
Query: 238 LTLQLENALIK 248
LT +L + +++
Sbjct: 119 LTRELTHPMMR 129
>pdb|2KYK|A Chain A, The Sandwich Region Between Two Lmp2a Py Motif Regulates
The Interaction Between Aip4ww2domain And Py Motif
Length = 39
Score = 44.7 bits (104), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 19/30 (63%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHP 46
LPPGWE RV G +YYV+H T T W P
Sbjct: 7 LPPGWERRVDNMGRIYYVDHFTRTTTWQRP 36
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 53 KVSGDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
+ G LP GWE+ V G+I + + T T+ P +
Sbjct: 2 RAMGPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTL 38
>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|B Chain B, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|C Chain C, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|D Chain D, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
Length = 303
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKP---SAQCIAMELN 182
AIVTG TGIG + L G V++A R L++ A ++ P A+ I ++ N
Sbjct: 21 AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 80
Query: 183 LCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTE----DGFETTFQVNHLAHFYL 238
+ + V + F +N LV N G G S E G+ + N FY+
Sbjct: 81 IRNEEEVNNLVKSTLDTFGKINFLVNNGG--GQFLSPAEHISSKGWHAVLETNLTGTFYM 138
Query: 239 TLQLENALIK 248
+ ++ +K
Sbjct: 139 CKAVYSSWMK 148
>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|B Chain B, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|C Chain C, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|D Chain D, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
Length = 261
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 119 RD-LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCI 177
RD L+N A+VT + GIGF AR LA G V+++ R + A++ + E S
Sbjct: 10 RDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGT 69
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV---FGLGFSHTEDGFETTFQVNHLA 234
+ + + ++ K ++ILV NA V FG TE+ ++ T +N A
Sbjct: 70 VCHVG--KAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKA 127
Query: 235 HFYLT 239
+T
Sbjct: 128 PALMT 132
>pdb|2KCF|A Chain A, The Nmr Solution Structure Of The Isolated Apo Pin1 Ww
Domain
Length = 36
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 16 ELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
+LPPGWE+R++ + G VYY NH T +QW P
Sbjct: 3 KLPPGWEKRMSRSSGRVYYFNHITNASQWERP 34
>pdb|2ZR6|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
pdb|3OOB|A Chain A, Structural And Functional Insights Of Directly Targeting
Pin1 By Epigallocatechin-3-Gallate
Length = 163
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+ ++ + G VYY NH T +QW P
Sbjct: 4 EEKLPPGWEKAMSRSSGRVYYFNHITNASQWERP 37
>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|B Chain B, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|C Chain C, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|D Chain D, Crystal Structure Of A Probable Dehydrogenase Protein
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A++TGA +GIG A+ G RV + R D + AI++I + ++ +
Sbjct: 32 AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSAN 86
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAG---VFGLGFSHTEDGFETTFQVN 231
L + + E+ + + +++L +NAG LG TE+ ++ TF N
Sbjct: 87 LAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLG-EVTEEQYDDTFDRN 134
>pdb|3KAD|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KAF|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|2XP6|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
Length = 167
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+ ++ + G VYY NH T +QW P
Sbjct: 8 EEKLPPGWEKAMSRSSGRVYYFNHITNASQWERP 41
>pdb|3TC5|A Chain A, Selective Targeting Of Disease-Relevant Protein Binding
Domains By O- Phosphorylated Natural Product
Derivatives
Length = 166
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+ ++ + G VYY NH T +QW P
Sbjct: 7 EEKLPPGWEKAMSRSSGRVYYFNHITNASQWERP 40
>pdb|1WR4|A Chain A, Solution Structure Of The Second Ww Domain Of Nedd4-2
Length = 36
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 18/30 (60%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHP 46
LP GWEER A G YYVNH T WT P
Sbjct: 5 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 34
>pdb|2LB2|A Chain A, Structure Of The Second Domain Of Human Nedd4l In
Complex With A Phosphorylated Ptpy Motif Derived From
Human Smad3
Length = 35
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 18/30 (60%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHP 46
LP GWEER A G YYVNH T WT P
Sbjct: 2 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 31
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L+ A+VTGA GIG AR G V L DK + + +
Sbjct: 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFS 79
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYL 238
NL KS+K+ AE +++ ++ILV NAG+ GL + ++ VN A L
Sbjct: 80 ANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTL 139
Query: 239 TLQLENALIK 248
T +L +++++
Sbjct: 140 TRELIHSMMR 149
>pdb|2ITK|A Chain A, Human Pin1 Bound To D-Peptide
pdb|2Q5A|A Chain A, Human Pin1 Bound To L-Peptide
pdb|3KAB|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KAG|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KAH|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KAI|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KCE|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3ODK|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
pdb|2XP3|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
pdb|2XP4|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
pdb|2XP5|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
pdb|2XP7|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
pdb|2XP8|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
pdb|2XP9|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
pdb|2XPA|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
pdb|2XPB|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1
Inhibitors By Structure-Guided Fragment Evolution
pdb|3NTP|A Chain A, Human Pin1 Complexed With Reduced Amide Inhibitor
Length = 167
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+ ++ + G VYY NH T +QW P
Sbjct: 8 EEKLPPGWEKAMSRSSGRVYYFNHITNASQWERP 41
>pdb|1E0M|A Chain A, Prototype Ww Domain
Length = 37
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LPPGW+E T +G YY NH T+ + WT PR
Sbjct: 4 LPPGWDEYKTHNGKTYYYNHNTKTSTWTDPR 34
Score = 37.7 bits (86), Expect = 0.009, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
LP GW++ + +GK +YN +T T+TDPR+
Sbjct: 4 LPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRM 35
>pdb|2LTY|A Chain A, Nedd4l Ww2 Domain In Complex With A Smad7 Derived
Peptide
Length = 34
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 18/30 (60%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHP 46
LP GWEER A G YYVNH T WT P
Sbjct: 3 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 32
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 123 NYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELN 182
N IVTG+ GIG A +LA G V++A + + A +I+ + +A I++ ++
Sbjct: 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTA--ISVAVD 66
Query: 183 LCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFY---LT 239
+ +S K A+ +F ++ LV NA +FG G + F + +Y ++
Sbjct: 67 VSDPESAKAMADRTLAEFGGIDYLVNNAAIFG--------GMKLDFLLTIDPEYYKKFMS 118
Query: 240 LQLENAL 246
+ L+ AL
Sbjct: 119 VNLDGAL 125
>pdb|2LB3|A Chain A, Structure Of The Ww Domain Of Pin1 In Complex With A
Human Phosphorylated Smad3 Derived Peptide
Length = 36
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 16 ELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
+LPPGWE+R++ + G VYY NH T +QW P
Sbjct: 1 KLPPGWEKRMSRSSGRVYYFNHITNASQWERP 32
>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
pdb|3T4X|B Chain B, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
Length = 267
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A+VTG+ GIG A SL G V++ R + N+ I +I + P A +
Sbjct: 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF 213
+L + + E+Y K ++IL+ N G+F
Sbjct: 68 ADLGTEQGCQDVIEKYPK----VDILINNLGIF 96
>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase,
Complexed With Nadp+ At 2.6a Resolution
Length = 252
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 119 RDLSNYNAI-VTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKP-SAQC 176
+DL N I VTGA+ GIG E A + A +G VIL R+ +K S I E Q
Sbjct: 7 QDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 66
Query: 177 IAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG 214
++L C ++ ++ A+ + L+ ++ NAG+ G
Sbjct: 67 FILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLG 104
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
++VTG+ GIG A LA G VI+ S ++A A+++ + K + +E+NL
Sbjct: 10 SLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERA-KAVAEEIANKYGVKAHGVEMNLLS 68
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
+S+ K EE ++ILV NAG+
Sbjct: 69 EESINKAFEEIYNLVDGIDILVNNAGI 95
>pdb|1I6C|A Chain A, Solution Structure Of Pin1 Ww Domain
pdb|1I8G|B Chain B, Solution Structure Of Pin1 Ww Domain Complexed With
Cdc25 Phosphothreonine Peptide
pdb|1I8H|B Chain B, Solution Structure Of Pin1 Ww Domain Complexed With
Human Tau Phosphothreonine Peptide
Length = 39
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 16 ELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
+LPPGWE+R++ + G VYY NH T +QW P
Sbjct: 1 KLPPGWEKRMSRSSGRVYYFNHITNASQWERP 32
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA+ GIG A +LA G +VI S + A AIS L A + LN+
Sbjct: 8 ALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYL----GANGKGLMLNVTD 62
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
S++ E+ + +F ++ILV NAG+
Sbjct: 63 PASIESVLEKIRAEFGEVDILVNNAGI 89
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA+ GIG A +LA G +VI S + A AIS L A + LN+
Sbjct: 8 ALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYL----GANGKGLMLNVTD 62
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
S++ E+ + +F ++ILV NAG+
Sbjct: 63 PASIESVLEKIRAEFGEVDILVNNAGI 89
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA+ GIG A +LA G +VI S + A AIS L A + LN+
Sbjct: 8 ALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYL----GANGKGLMLNVTD 62
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
S++ E+ + +F ++ILV NAG+
Sbjct: 63 PASIESVLEKIRAEFGEVDILVNNAGI 89
>pdb|2YSF|A Chain A, Solution Structure Of The Fourth Ww Domain From The
Human E3 Ubiquitin-Protein Ligase Itchy Homolog, Itch
Length = 40
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 11 SDSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPRTG 49
S LP GWE R T DG Y+V+H T + PRTG
Sbjct: 2 SSGSSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTG 40
Score = 32.0 bits (71), Expect = 0.44, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 55 SGDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
S LP GWE + DG F + + TY DPR
Sbjct: 5 SSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPR 38
>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
pdb|3E9Q|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 119 RDLSNYNAI-VTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKP-SAQC 176
+DL N I VTGA+ GIG E A + A +G VIL R+ +K S I E Q
Sbjct: 28 QDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW 87
Query: 177 IAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG 214
++L C ++ ++ A+ + L+ ++ NAG+ G
Sbjct: 88 FILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLG 125
>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|B Chain B, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|C Chain C, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|D Chain D, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
Length = 276
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +++ L SA IA
Sbjct: 9 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG-LGFSHTE-DGFETTFQVNHLAHFY 237
+ + ++F E L++L+LN ++ L F H E D + +VN H +
Sbjct: 69 SME--DMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNF--HSF 124
Query: 238 LTLQLENALIKGAKLFARQQGA---ATSIYCATSLDLSLPVSGSYF 280
+ L + + + QG+ +S+ + L P S S F
Sbjct: 125 VVLS-----VAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKF 165
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSA--QCIAMELNLC 184
++TGA+ GIG AR L + G +++L R + I I TE A +A L++
Sbjct: 8 LITGASGGIGEGIARELGVAGAKILLGARRQAR----IEAIATEIRDAGGTALAQVLDVT 63
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHFY----- 237
SV FA+ + +++LV NAGV L + D +E VN +
Sbjct: 64 DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAV 123
Query: 238 ---LTLQLENALIKGAKLFARQQGAATSIYCAT 267
+ Q +I + A ++YCAT
Sbjct: 124 LPIMEAQRSGQIINIGSIGALSVVPTAAVYCAT 156
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
L+ A+VTG + GIG A+ L G RV + R + D +++ C A+
Sbjct: 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL---SAYGDCQAI 82
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV-FGLGF-SHTEDGFETTFQVNHLAHFY 237
+L ++ A+ + L+ILV NAG +G S+ G+E Q+N + F
Sbjct: 83 PADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFS 142
Query: 238 LTLQL 242
QL
Sbjct: 143 CIQQL 147
>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|B Chain B, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|C Chain C, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|D Chain D, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 114 QILHGRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKP 172
++L G+ + IVTGA+ GIG E A LA G V++ RS + +++ L
Sbjct: 7 EMLQGKKV-----IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAA 61
Query: 173 SAQCIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG-LGFSHTE-DGFETTFQV 230
SA IA + + ++F E L++L+LN ++ L F H E D + +V
Sbjct: 62 SAHYIAGSME--DMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEV 119
Query: 231 NHLAHFYLTLQLENALIKGAKLFARQQGA---ATSIYCATSLDLSLPVSGSYF 280
N H ++ L + + + QG+ +S+ + L P S S F
Sbjct: 120 NF--HSFVVLS-----VAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKF 165
>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
pdb|1XSE|B Chain B, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
Length = 295
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +++ L SA IA
Sbjct: 30 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 89
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG-LGFSHTE-DGFETTFQVNHLAHFY 237
+ + ++F E L++L+LN ++ L F H E D + +VN H +
Sbjct: 90 SME--DMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNF--HSF 145
Query: 238 LTLQLENALIKGAKLFARQQGA---ATSIYCATSLDLSLPVSGSYF 280
+ L + + + QG+ +S+ + L P S S F
Sbjct: 146 VVLS-----VAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKF 186
>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|B Chain B, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|C Chain C, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|D Chain D, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
Length = 294
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 118 GRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCI 177
GR L + A+VTG ++GIG A + A G V + ++ + K L E+ + +
Sbjct: 45 GR-LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAV 103
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAG---VFGLGFSHTEDGFETTFQVNHLA 234
+ +L + + ++ L+IL L AG T + F+ TF VN A
Sbjct: 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFA 163
Query: 235 HFYLTLQLENALIKGAKLF 253
F++T + L KGA +
Sbjct: 164 LFWITQEAIPLLPKGASII 182
>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|B Chain B, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|E Chain E, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|F Chain F, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
Length = 261
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSL-DKANDAISKILTEKPSAQCI 177
+DL ++TG++TG+G A A +V++ RS D+AN + +I +K + I
Sbjct: 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI--KKVGGEAI 60
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
A++ ++ V + K+F L++++ NAG+
Sbjct: 61 AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL 95
>pdb|1WR7|A Chain A, Solution Structure Of The Third Ww Domain Of Nedd4-2
Length = 41
Score = 42.4 bits (98), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LPPGWE R+ +G ++++H T+ T W PR
Sbjct: 9 LPPGWEMRIAPNGRPFFIDHNTKTTTWEDPR 39
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
LP GWE ++ +G+ F + +T T+ DPR+
Sbjct: 9 LPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRL 40
>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|B Chain B, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|C Chain C, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|D Chain D, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
Length = 263
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +++ L SA IA
Sbjct: 7 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG-LGFSHTE-DGFETTFQVNHLAHFY 237
+ + ++F E L++L+LN ++ L F H E D + +VN H +
Sbjct: 67 SME--DMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNF--HSF 122
Query: 238 LTLQLENALIKGAKLFARQQGA---ATSIYCATSLDLSLPVSGSYF 280
+ L + + + QG+ +S+ + L P S S F
Sbjct: 123 VVLS-----VAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKF 163
>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
Length = 261
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSL-DKANDAISKILTEKPSAQCI 177
+DL ++TG++TG+G A A +V++ RS D+AN + +I +K + I
Sbjct: 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI--KKVGGEAI 60
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
A++ ++ V + K+F L++++ NAG+
Sbjct: 61 AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL 95
>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
Length = 261
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSL-DKANDAISKILTEKPSAQCI 177
+DL ++TG++TG+G A A +V++ RS D+AN + +I +K + I
Sbjct: 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI--KKVGGEAI 60
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
A++ ++ V + K+F L++++ NAG+
Sbjct: 61 AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL 95
>pdb|2EZ5|W Chain W, Solution Structure Of The Dnedd4 Ww3 Domain- Comm Lpsy
Peptide Complex
Length = 46
Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 11 SDSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPRTG 49
S E+ LPP W +V +G ++++HA+ T W PR G
Sbjct: 5 SGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNG 43
>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|B Chain B, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|E Chain E, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|F Chain F, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
Length = 261
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSL-DKANDAISKILTEKPSAQCI 177
+DL ++TG++TG+G A A +V++ RS D+AN + +I +K + I
Sbjct: 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI--KKVGGEAI 60
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
A++ ++ V + K+F L++++ NAG+
Sbjct: 61 AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL 95
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DLS + +VTG GIG A A G V +A RS + +++ L E + I +
Sbjct: 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARS-PRELSSVTAELGELGAGNVIGV 96
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF 213
L++ S A F +L+++ NAG+F
Sbjct: 97 RLDVSDPGSCADAARTVVDAFGALDVVCANAGIF 130
>pdb|2JMF|A Chain A, Solution Structure Of The Su(Dx) Ww4- Notch Py Peptide
Complex
Length = 53
Score = 42.0 bits (97), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 13 SEDELPPGWEERVTADGCVYYVNHATEGTQWTHPRTG 49
+E LPPGWE R TA G ++V+H T T + PR G
Sbjct: 15 NEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPG 51
Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
G LP GWE + G+ F + +T T+ DPR
Sbjct: 17 GPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPR 49
>pdb|2ZQU|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 14 EDELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
E++LPPGWE+R++ + G VYY NH T +Q P
Sbjct: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQAERP 37
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILA-CRSLDKANDAISKILTEKPSAQCIAM 179
L+ A VTG + GIG A+ LAL G V L + ++A +S+I E+ + +A+
Sbjct: 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI--EQAGGRAVAI 86
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF 213
+ +++++ E + L+ILV +AG++
Sbjct: 87 RADNRDAEAIEQAIRETVEALGGLDILVNSAGIW 120
>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3R1I|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 112 ALQILHGRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACR---SLDKANDAISKIL 168
++ +L DLS A++TGA+TGIG + A + A G +V +A R +L D I+ +
Sbjct: 21 SMSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV- 79
Query: 169 TEKPSAQCIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF 213
+ + + ++ + V+ ++ + ++I V NAG+
Sbjct: 80 ----GGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120
>pdb|2L4J|A Chain A, Yap Ww2
Length = 46
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 11 SDSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
S + LP GWE+ +T +G +YY+NH + T W PR
Sbjct: 6 SPASGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPR 42
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 54 VSGDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
SG LP GWE++++ +G+I + N ++ DPR+
Sbjct: 8 ASGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRL 43
>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
Length = 262
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL + +VTG GIG A A G V +A RS DA L + S + I +
Sbjct: 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADI-DACVADLDQLGSGKVIGV 65
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHFY 237
+ ++ A ++F ++++ NAGVF + T + F VN FY
Sbjct: 66 QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFY 125
Query: 238 LTLQLENALI 247
+ALI
Sbjct: 126 AVQACLDALI 135
>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|B Chain B, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|C Chain C, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|D Chain D, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
Length = 259
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L +A++TG+ GIG A + G V +A +++A A ++I P+A A++
Sbjct: 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAY--AVQ 60
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHFYL 238
++ R S+ + L+ILV NA +F L T + +E F +N +A
Sbjct: 61 XDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAIN-VAGTLF 119
Query: 239 TLQLE----------NALIKGAKLFARQQGAATSIYCAT 267
TLQ +I A R+ A +IYCAT
Sbjct: 120 TLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCAT 158
>pdb|3TCZ|A Chain A, Human Pin1 Bound To Cis Peptidomimetic Inhibitor
pdb|3TDB|A Chain A, Human Pin1 Bound To Trans Peptidomimetic Inhibitor
Length = 158
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 16 ELPPGWEERVT-ADGCVYYVNHATEGTQWTHP 46
+LPPGWE+ ++ + G VYY NH T +QW P
Sbjct: 1 KLPPGWEKAMSRSSGRVYYFNHITNASQWERP 32
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILA-CRSLDKANDAISKILTEKPSAQCIAMELNLC 184
A+VTGA+ GIG A LA G V++ + KAN+ + +I +K + IA+ ++
Sbjct: 7 ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEI--KKLGSDAIAVRADVA 64
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGV 212
+ V ++ F ++ILV NAGV
Sbjct: 65 NAEDVTNMVKQTVDVFGQVDILVNNAGV 92
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 125 NAIVTGANTGIGFETARSLALHGCRVILA-CRSLDKANDAISKILTEKPSAQCIAMELNL 183
+A+VTGA+ GIG A LA G V + S +KA + +I + A++ N+
Sbjct: 12 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI--KAKGVDSFAIQANV 69
Query: 184 CRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
VK +E +F SL++LV NAG+
Sbjct: 70 ADADEVKAMIKEVVSQFGSLDVLVNNAGI 98
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
+ L AIVTGA+ GIG A LA G VI + + + I ++ +
Sbjct: 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVI-GTATTEAGAEGIGAAF-KQAGLEGRG 81
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHF 236
LN+ +V E K+F +LN+LV NAG+ L +D ++ N A F
Sbjct: 82 AVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVF 141
Query: 237 YLTLQLENALIK 248
L+ + ++K
Sbjct: 142 RLSRAVLRPMMK 153
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 117 HGRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEK-PSAQ 175
H S + I+TG++ GIG A A G +V + R+ D+ + +IL P+ +
Sbjct: 20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEK 79
Query: 176 CIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV-FGLGFSHTE---DGFETTFQVN 231
A+ ++ KF ++ILV NAG G ++T+ + ++ TF++N
Sbjct: 80 INAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLN 139
Query: 232 HLAHFYLTLQLENALIK 248
A +T + + LIK
Sbjct: 140 FQAVIEMTQKTKEHLIK 156
>pdb|2OP7|A Chain A, Ww4
Length = 39
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 13 SEDELPPGWEERVTADGCVYYVNHATEGTQWTHPRTG 49
+E+ LP GWE R T +G Y+V+H T T + PR G
Sbjct: 1 NEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNG 37
Score = 29.6 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
LP GWE + +G F + +T T+ DPR
Sbjct: 5 LPEGWEIRYTREGVRYFVDHNTRTTTFKDPR 35
>pdb|2LAJ|A Chain A, Third Ww Domain Of Human Nedd4l In Complex With Doubly
Phosphorylated Human Smad3 Derived Peptide
Length = 44
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LPPGWE R+ +G ++ +H T+ T W PR
Sbjct: 8 LPPGWEMRIAPNGRPFFYDHNTKTTTWEDPR 38
Score = 38.5 bits (88), Expect = 0.005, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPRIVF 91
LP GWE ++ +G+ FY+ +T T+ DPR+ F
Sbjct: 8 LPPGWEMRIAPNGRPFFYDHNTKTTTWEDPRLKF 41
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 125 NAIVTGANTGIGFETARSLALHGCRVILA-CRSLDKANDAISKILTEKPSAQCIAMELNL 183
+A+VTGA+ GIG A LA G V + S +KA + +I + A++ N+
Sbjct: 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI--KAKGVDSFAIQANV 63
Query: 184 CRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
VK +E +F SL++LV NAG+
Sbjct: 64 ADADEVKAXIKEVVSQFGSLDVLVNNAGI 92
>pdb|2YSB|A Chain A, Solution Structure Of The First Ww Domain From The Mouse
Salvador Homolog 1 Protein (Sav1)
Length = 49
Score = 40.4 bits (93), Expect = 0.001, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 11 SDSED-ELPPGWEERVTADGCVYYVNHATEGTQWTHP 46
S ED LPPGW T G YY++H T T W+HP
Sbjct: 5 SSGEDLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHP 41
>pdb|3OLM|A Chain A, Structure And Function Of A Ubiquitin Binding Site
Within The Catalytic Domain Of A Hect Ubiquitin Ligase
Length = 429
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LP GWE R+T VY+V+H T+ T W PR
Sbjct: 9 LPSGWEMRLTNTARVYFVDHNTKTTTWDDPR 39
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRIVFAKEEK--ENPLDIRQK--YDHSTK 111
G LP GWE ++ ++ F + +T T+ DPR+ + ++ + D R+K Y S
Sbjct: 7 GPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSSLDQNVPQYKRDFRRKVIYFRSQP 66
Query: 112 ALQILHGR 119
AL+IL G+
Sbjct: 67 ALRILPGQ 74
>pdb|1O6W|A Chain A, Solution Structure Of The Prp40 Ww Domain Pair Of The
Yeast Splicing Factor Prp40
Length = 75
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 21 WEERVTADGCVYYVNHATEGTQWTHPRTGVKKKVSGDLPLGWEKSVSEDGKITFYNKDTH 80
W+E A G +YY N T+ + W P+ + ++ GW+ + + DGK+ +YN T
Sbjct: 4 WKEAKDASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGWKAAKTADGKVYYYNPTTR 63
Query: 81 VKTYTDP 87
++T P
Sbjct: 64 ETSWTIP 70
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 20 GWEERVTADGCVYYVNHATEGTQWTHP 46
GW+ TADG VYY N T T WT P
Sbjct: 44 GWKAAKTADGKVYYYNPTTRETSWTIP 70
>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|B Chain B, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|C Chain C, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|D Chain D, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL+ AIVTGA GIG AR LA GC V+ A D A+ A +KI +A C
Sbjct: 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAAC--- 80
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVN 231
+++ + + + F ++ LV NAGV L T + F+ +N
Sbjct: 81 RVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAIN 134
>pdb|1YMZ|A Chain A, Cc45, An Artificial Ww Domain Designed Using Statistical
Coupling Analysis
Length = 43
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHP 46
LPPGWE R +G VYY N T T W P
Sbjct: 9 LPPGWERRTDVEGKVYYFNVRTLTTTWERP 38
Score = 32.3 bits (72), Expect = 0.39, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPRIVF 91
LP GWE+ +GK+ ++N T T+ P I+
Sbjct: 9 LPPGWERRTDVEGKVYYFNVRTLTTTWERPTIIL 42
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
+L A+VTGA+ GIG A LA G +VI S + AIS L + M
Sbjct: 9 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNGK----GM 63
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
LN+ +S++ + +F ++ILV NAG+
Sbjct: 64 ALNVTNPESIEAVLKAITDEFGGVDILVNNAGI 96
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
+L A+VTGA+ GIG A LA G +VI S + AIS L + M
Sbjct: 9 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNGK----GM 63
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
LN+ +S++ + +F ++ILV NAG+
Sbjct: 64 ALNVTNPESIEAVLKAITDEFGGVDILVNNAGI 96
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
+L A+VTGA+ GIG A LA G +VI S + AIS L + M
Sbjct: 9 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNGK----GM 63
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
LN+ +S++ + +F ++ILV NAG+
Sbjct: 64 ALNVTNPESIEAVLKAITDEFGGVDILVNNAGI 96
>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
pdb|3UF0|B Chain B, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
Length = 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L+ A+VTGA +GIG A A G V+ R+ D + +I SA+ + +
Sbjct: 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVAD 87
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF 213
L L+ AEE R +++LV NAG+
Sbjct: 88 --LADLEGAANVAEELAAT-RRVDVLVNNAGII 117
>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
Length = 277
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL+ IVTG +GIG TA A +G V++A D DA ++ E S + +
Sbjct: 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVA----DVNEDAAVRVANEIGS-KAFGV 78
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG 214
+++ K + E+ K+ +++LV NAG FG
Sbjct: 79 RVDVSSAKDAESXVEKTTAKWGRVDVLVNNAG-FG 112
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA +GIG E AR L G RV + R + + L E A + + C
Sbjct: 25 ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAG-VEADGRTCD 79
Query: 186 LKSV---KKFAEEYQKKFRSLNILVLNAGVFGLG 216
++SV + +++ +++LV NAG G G
Sbjct: 80 VRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGG 113
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA +GIG E AR L G RV + R + + L E A + + C
Sbjct: 29 ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAG-VEADGRTCD 83
Query: 186 LKSV---KKFAEEYQKKFRSLNILVLNAGVFGLG 216
++SV + +++ +++LV NAG G G
Sbjct: 84 VRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGG 117
>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|D Chain D, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|C Chain C, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|F Chain F, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|E Chain E, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|H Chain H, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|G Chain G, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 271
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILA 153
+L N AI+TGA GIG ET+R LA G RV+LA
Sbjct: 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLA 41
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 125 NAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLC 184
+ +VTG N GIG AR+ A G +V + RS +P +A++ ++
Sbjct: 23 SVLVTGGNRGIGLAIARAFADAGDKVAITYRS-------------GEPPEGFLAVKCDIT 69
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQL 242
+ V++ +E ++ + +L+ NAGV L +E+ F + + N F + +
Sbjct: 70 DTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRA 129
Query: 243 ENALIKGAK 251
A+++ K
Sbjct: 130 NRAMLRAKK 138
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA +GIG E AR L G RV + R + + L E A + + C
Sbjct: 29 ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAG-VEADGRTCD 83
Query: 186 LKSV---KKFAEEYQKKFRSLNILVLNAGVFGLGFSH--TEDGFETTFQVNHLAHFYLTL 240
++SV + +++ +++LV NAG G G + ++ + + N F +T
Sbjct: 84 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 241 QLENALIKGAKLFARQQGAATSI 263
Q ++K + R G +I
Sbjct: 144 Q----VLKAGGMLERGTGRIVNI 162
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
+L A+VTGA+ GIG A LA G +VI S + AIS L +
Sbjct: 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNGKGXA--- 61
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
LN+ +S++ + +F ++ILV NAG+
Sbjct: 62 -LNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 125 NAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKP-SAQCIAMELNL 183
N ++TGA+ GIG E A++LA G +V + RS + DA+ L EK A I +
Sbjct: 31 NVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFD--- 87
Query: 184 CRLKSVKKFAEEYQKKFRS---LNILVLNAGV 212
S F E Q +S L+ LV NAGV
Sbjct: 88 --AASESDFIEAIQTIVQSDGGLSYLVNNAGV 117
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA +GIG E AR L G RV + R + + L E A + + C
Sbjct: 25 ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAG-VEADGRTCD 79
Query: 186 LKSV---KKFAEEYQKKFRSLNILVLNAGVFGLGFSH--TEDGFETTFQVNHLAHFYLTL 240
++SV + +++ +++LV NAG G G + ++ + + N F +T
Sbjct: 80 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 139
Query: 241 QLENALIKGAKLFARQQGAATSI 263
Q ++K + R G +I
Sbjct: 140 Q----VLKAGGMLERGTGRIVNI 158
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA +GIG E AR L G RV + R + + L E A + + C
Sbjct: 9 ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAG-VEADGRTCD 63
Query: 186 LKSV---KKFAEEYQKKFRSLNILVLNAGVFGLGFSH--TEDGFETTFQVNHLAHFYLTL 240
++SV + +++ +++LV NAG G G + ++ + + N F +T
Sbjct: 64 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 123
Query: 241 QLENALIKGAKLFARQQGAATSI 263
Q ++K + R G +I
Sbjct: 124 Q----VLKAGGMLERGTGRIVNI 142
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA +GIG E AR L G RV + R + + L E A + + C
Sbjct: 29 ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAG-VEADGRTCD 83
Query: 186 LKSV---KKFAEEYQKKFRSLNILVLNAGVFGLGFSH--TEDGFETTFQVNHLAHFYLTL 240
++SV + +++ +++LV NAG G G + ++ + + N F +T
Sbjct: 84 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 241 QLENALIKGAKLFARQQGAATSI 263
Q ++K + R G +I
Sbjct: 144 Q----VLKAGGMLERGTGRIVNI 162
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA +GIG E AR L G RV + R + + L E A + + C
Sbjct: 29 ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAG-VEADGRTCD 83
Query: 186 LKSV---KKFAEEYQKKFRSLNILVLNAGVFGLGFSH--TEDGFETTFQVNHLAHFYLTL 240
++SV + +++ +++LV NAG G G + ++ + + N F +T
Sbjct: 84 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK 143
Query: 241 QLENALIKGAKLFARQQGAATSI 263
Q ++K + R G +I
Sbjct: 144 Q----VLKAGGMLERGTGRIVNI 162
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA +GIG E AR L G RV + R + + L E A + + C
Sbjct: 29 ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAG-VEADGRTCD 83
Query: 186 LKSV---KKFAEEYQKKFRSLNILVLNAGVFGLG 216
++SV + +++ +++LV NAG G G
Sbjct: 84 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 117
>pdb|2KBU|A Chain A, Nmr Solution Structure Of Pin1 Ww Domain Mutant With
Beta Turn Mimic At Position 12
Length = 31
Score = 38.1 bits (87), Expect = 0.007, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 16 ELPPGWEERVTADGCVYYVNHATEGTQWTHP 46
+LPPGWE+R++ VYY NH T +Q+ P
Sbjct: 1 KLPPGWEKRMSXR--VYYFNHITNASQFERP 29
>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|B Chain B, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|C Chain C, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|D Chain D, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|E Chain E, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|F Chain F, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|G Chain G, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|H Chain H, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
Length = 279
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A VTG++ GIG+ A + A G V + S D ++ L + A + N+
Sbjct: 37 ASVTGSSGGIGWAVAEAYAQAGADVAIWYNS--HPADEKAEHLQKTYGVHSKAYKCNISD 94
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
KSV++ + +K F ++++ V NAGV
Sbjct: 95 PKSVEETISQQEKDFGTIDVFVANAGV 121
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL+ +++TGA++GIG AR L G +VI++ + +K L +A
Sbjct: 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEK--------LKSLGNALKDNY 62
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFY 237
+ +C L + K+ K +L+ILV NAG+ L + F+ +N A+F
Sbjct: 63 TIEVCNLAN-KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFI 121
Query: 238 L 238
L
Sbjct: 122 L 122
>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|B Chain B, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|C Chain C, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|D Chain D, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
Length = 260
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 23/146 (15%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
++TGA+ GIG R+ RV+ RS+ + D P +A + + +
Sbjct: 32 VITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD---------PDIHTVAGD--ISKP 80
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVFGLG---FSHTEDGFETTFQVNHLAHFYLTLQLE 243
++ + E ++F ++ LV NAGVF L T++ ++ VN F++T +
Sbjct: 81 ETADRIVREGIERFGRIDSLVNNAGVF-LAKPFVEXTQEDYDHNLGVNVAGFFHITQRAA 139
Query: 244 NALIKGAKLFARQQGAATSIYCATSL 269
+K QG+ + TSL
Sbjct: 140 AEXLK--------QGSGHIVSITTSL 157
>pdb|2YSE|A Chain A, Solution Structure Of The Second Ww Domain From The
Human Membrane-Associated Guanylate Kinase, Ww And Pdz
Domain- Containing Protein 1. Magi-1
Length = 60
Score = 37.7 bits (86), Expect = 0.009, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 12 DSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPRTGVKKK 53
DSE ELP GWE+ +YYV+H TQ+ +P K+K
Sbjct: 9 DSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRK 50
>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|B Chain B, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|C Chain C, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|D Chain D, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
Length = 283
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +S L SA IA
Sbjct: 29 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN 209
+ + ++F + K L++L+LN
Sbjct: 89 TME--DMTFAEQFVAQAGKLMGGLDMLILN 116
>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase (Nadph) From Sinorhizobium Meliloti
Length = 324
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKAN----DAISKILTEKPSAQCIAMELN 182
++TGA++G G TA +LA G RV + R + N +AI+ + +EL+
Sbjct: 9 LITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDN-DVDLRTLELD 67
Query: 183 LCRLKSVKKFAEEYQKKFRSLNILVLNAG--VFGLGFSHTEDGFETTFQVNHLA 234
+ SV + ++ + +++L+ NAG VFG + T + F + +N L+
Sbjct: 68 VQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDINVLS 121
>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017.
pdb|4HFR|B Chain B, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017
Length = 272
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +S L SA IA
Sbjct: 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN------AGVFGLGFSHTEDGFETTFQVNHL 233
+ + ++F + K L++L+LN +F H E VN L
Sbjct: 72 TME--DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME----VNFL 125
Query: 234 AHFYLTL 240
++ LT+
Sbjct: 126 SYVVLTV 132
>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|B Chain B, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|D Chain D, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|E Chain E, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3TFQ|A Chain A, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|B Chain B, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|D Chain D, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|E Chain E, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
Length = 286
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +S L SA IA
Sbjct: 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN 209
+ + ++F + K L++L+LN
Sbjct: 86 TME--DMTFAEQFVAQAGKLMGGLDMLILN 113
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA GIG A +L L G +V L +L+ + + + + + ++ ++
Sbjct: 10 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 69
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVN 231
+ ++ + F L+ILV NAGV + E +E T Q+N
Sbjct: 70 QQQLRDTFRKVVDHFGRLDILVNNAGV------NNEKNWEKTLQIN 109
>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Sulfone Inhibitor
Length = 275
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +S L SA IA
Sbjct: 22 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN------AGVFGLGFSHTEDGFETTFQVNHL 233
+ + ++F + K L++L+LN +F H E VN L
Sbjct: 82 TME--DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME----VNFL 135
Query: 234 AHFYLTL 240
++ LT+
Sbjct: 136 SYVVLTV 142
>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
pdb|3PDJ|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
Length = 273
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +S L SA IA
Sbjct: 13 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN------AGVFGLGFSHTEDGFETTFQVNHL 233
+ + ++F + K L++L+LN +F H E VN L
Sbjct: 73 TME--DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME----VNFL 126
Query: 234 AHFYLTL 240
++ LT+
Sbjct: 127 SYVVLTV 133
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
+L A+VTGA+ GIG A LA G +VI S + AIS L + M
Sbjct: 9 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNGK----GM 63
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
LN+ +S++ + +F ++ILV NA +
Sbjct: 64 ALNVTNPESIEAVLKAITDEFGGVDILVNNAAI 96
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 122 SNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMEL 181
+N AIVTGA+ GIG A LA G V++ A + ++ + E + + +
Sbjct: 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKI-EAAGGKALTAQA 84
Query: 182 NLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGL-GFSHTEDG-FETTFQVNHLAHF 236
++ +V++ ++ F +++LV NAG+ L + T D F+ VN F
Sbjct: 85 DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTF 141
>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|B Chain B, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|C Chain C, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|D Chain D, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
Length = 272
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +S L SA IA
Sbjct: 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN------AGVFGLGFSHTEDGFETTFQVNHL 233
+ + ++F + K L++L+LN +F H E VN L
Sbjct: 72 TME--DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME----VNFL 125
Query: 234 AHFYLTL 240
++ LT+
Sbjct: 126 SYVVLTV 132
>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|B Chain B, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|C Chain C, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|D Chain D, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
Length = 263
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DLS AIVTG + GIG AR+L G V +A + A ++ + A+
Sbjct: 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG-----FAV 63
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGL--GFSHTEDGFETTFQVNHLAHF 236
E+++ + SV ++ ++L NAGV + T++ ++ F VN F
Sbjct: 64 EVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVF 122
>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB6|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 18/134 (13%)
Query: 114 QILHGRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKP 172
++L G+ + IVTGA+ GIG E A LA G V++ RS + +S L
Sbjct: 30 EMLQGKKV-----IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 84
Query: 173 SAQCIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLN------AGVFGLGFSHTEDGFET 226
SA IA + + ++F + K L++L+LN +F H E
Sbjct: 85 SAHYIAGTME--DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME- 141
Query: 227 TFQVNHLAHFYLTL 240
VN L++ LT+
Sbjct: 142 ---VNFLSYVVLTV 152
>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|B Chain B, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|C Chain C, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|D Chain D, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|E Chain E, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|F Chain F, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|G Chain G, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|H Chain H, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
Length = 264
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +S L SA IA
Sbjct: 7 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN 209
+ + ++F + K L++L+LN
Sbjct: 67 TME--DMTFAEQFVAQAGKLMGGLDMLILN 94
>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
pdb|2Z1N|B Chain B, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
Length = 260
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQC 176
A+VT ++G+GF +A LA +G R++L R+ +K A S+I + AQ
Sbjct: 10 AVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQV 60
>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|B Chain B, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|C Chain C, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|D Chain D, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU9|A Chain A, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|B Chain B, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|C Chain C, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|D Chain D, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|3BZU|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3CZR|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3CZR|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3D3E|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D4N|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3FRJ|A Chain A, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3FRJ|B Chain B, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3HFG|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3FCO|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3FCO|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3H6K|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3OQ1|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3QQP|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
Length = 286
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +S L SA IA
Sbjct: 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN------AGVFGLGFSHTEDGFETTFQVNHL 233
+ + ++F + K L++L+LN +F H E VN L
Sbjct: 86 TME--DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME----VNFL 139
Query: 234 AHFYLTL 240
++ LT+
Sbjct: 140 SYVVLTV 146
>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|B Chain B, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|C Chain C, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|D Chain D, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|3BYZ|A Chain A, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|B Chain B, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|C Chain C, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|D Chain D, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3EY4|A Chain A, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|B Chain B, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|C Chain C, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|D Chain D, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
Length = 275
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A LA G V++ RS + +S L SA IA
Sbjct: 15 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN------AGVFGLGFSHTEDGFETTFQVNHL 233
+ + ++F + K L++L+LN +F H E VN L
Sbjct: 75 TME--DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME----VNFL 128
Query: 234 AHFYLTL 240
++ LT+
Sbjct: 129 SYVVLTV 135
>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|C Chain C, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|D Chain D, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 114 QILHGRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKP 172
++L G+ + IVTGA+ GIG E A LA G V++ RS + +S L
Sbjct: 30 EMLQGKKV-----IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA 84
Query: 173 SAQCIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLN 209
SA IA + + ++F + K L++L+LN
Sbjct: 85 SAHYIAGTME--DMTFAEQFVAQAGKLMGGLDMLILN 119
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
+ L N IVTGA +GIG A+ AL+ V+ D+ N + ++ + +
Sbjct: 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL--RGMGKEVLG 60
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSH----TEDGFETTFQVNHLA 234
++ ++ + K V++F + + +++L NAG+ G + +++ +E VN +
Sbjct: 61 VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMD-GVTPVAEVSDELWERVLAVNLYS 119
Query: 235 HFY 237
FY
Sbjct: 120 AFY 122
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACR---------SLDKANDAISKI-LT 169
D A++TG G+G A +LA G + + R L A+D + L
Sbjct: 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66
Query: 170 EKPSAQCIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
EK +CI+ ++++ +++ F E + ++I + NAG+
Sbjct: 67 EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI 109
>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE2|B Chain B, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE1|A Chain A, Tropinone Reductase-Ii
Length = 260
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 116 LHGR-DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSA 174
+ GR +L A+VTG + GIG+ LA G V R+ + ND +++ ++
Sbjct: 1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG--- 57
Query: 175 QCIAMELNLCRLKS-------VKKFAEEYQKKFRSLNILVLNAG--VFGLGFSHTEDGFE 225
+E ++C L S + A + K LNILV NAG ++ +T + +
Sbjct: 58 --FKVEASVCDLSSRSERQELMNTVANHFHGK---LNILVNNAGIVIYKEAKDYTVEDYS 112
Query: 226 TTFQVNHLAHFYLTL 240
+N A ++L++
Sbjct: 113 LIMSINFEAAYHLSV 127
>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|C Chain C, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|D Chain D, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
Length = 269
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILAC-RSLDKANDAISKILTEKPSAQCIA 178
DL + ++TG +TG+G A +V++ + ++A DA ++ E+ Q I
Sbjct: 12 DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEV--EEAGGQAII 69
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++ ++ + + V + K+F +L++++ NAGV
Sbjct: 70 VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGV 103
>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUS|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUT|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUT|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUU|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
pdb|3AUU|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
Length = 269
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILAC-RSLDKANDAISKILTEKPSAQCIA 178
DL + ++TG +TG+G A +V++ + ++A DA ++ E+ Q I
Sbjct: 12 DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEV--EEAGGQAII 69
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++ ++ + + V + K+F +L++++ NAGV
Sbjct: 70 VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGV 103
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
+L A+VTGA+ GIG A LA G +VI S + AIS L + M
Sbjct: 9 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS-ESGAQAISDYLGDNGK----GM 63
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
LN+ +S++ + +F ++ILV NA +
Sbjct: 64 ALNVTNPESIEAVLKAITDEFGGVDILVNNADI 96
>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|B Chain B, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|C Chain C, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|D Chain D, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|E Chain E, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|F Chain F, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|G Chain G, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|H Chain H, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
Length = 264
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A L+ G V+L RS + +S+ L SA IA
Sbjct: 7 LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN 209
+ + ++F + K L++L+LN
Sbjct: 67 TME--DMTFAEQFIVKAGKLMGGLDMLILN 94
>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
pdb|3AY7|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
Length = 269
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILAC-RSLDKANDAISKILTEKPSAQCIA 178
DL + ++TG +TG+G A +V++ + ++A DA ++ E+ Q I
Sbjct: 12 DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEV--EEAGGQAII 69
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++ ++ + + V + K+F +L++++ NAGV
Sbjct: 70 VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGV 103
>pdb|2KPZ|A Chain A, Human Nedd4 3rd Ww Domain Complex With The Human T-Cell
Leukemia Virus 1 Gag-Pro Poliprotein Derived Peptide
Sdpqipppyvep
pdb|2KQ0|A Chain A, Human Nedd4 3rd Ww Domain Complex With Ebola Zaire Virus
Matrix Protein Vp40 Derived Peptide Ilptappeymea
Length = 49
Score = 36.6 bits (83), Expect = 0.019, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 9 PDSDSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
P + LP GWE R +G ++++H T+ T W PR
Sbjct: 5 PSEIEQGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPR 43
Score = 31.6 bits (70), Expect = 0.56, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
G LP GWE + +G+ F + +T T+ DPR+
Sbjct: 11 GFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRL 44
>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPE|B Chain B, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPF|A Chain A, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
pdb|1IPF|B Chain B, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
Length = 259
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
+L A+VTG + GIG+ LA G V R+ + ND +++ ++ +
Sbjct: 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-----FKV 59
Query: 180 ELNLCRLKS-------VKKFAEEYQKKFRSLNILVLNAG--VFGLGFSHTEDGFETTFQV 230
E ++C L S + A + K LNILV NAG ++ +T + + +
Sbjct: 60 EASVCDLSSRSERQELMNTVANHFHGK---LNILVNNAGIVIYKEAKDYTVEDYSLIMSI 116
Query: 231 NHLAHFYLTL 240
N A ++L++
Sbjct: 117 NFEAAYHLSV 126
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA+ GIG AR+L G +V+ R++ + ++ + I +L
Sbjct: 35 ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLA 234
+ + + + ++I + NAG+ S + G++ F VN LA
Sbjct: 95 EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLA 145
>pdb|1K9Q|A Chain A, Yap65 Ww Domain Complexed To N-(N-Octyl)-Gpppy-Nh2
pdb|1K9R|A Chain A, Yap65 Ww Domain Complexed To Acetyl-Plppy
Length = 40
Score = 36.6 bits (83), Expect = 0.022, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LP GWE T+ G Y++NH + T W PR
Sbjct: 9 LPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 39
Score = 29.6 bits (65), Expect = 2.3, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
LP GWE + + G+ F N T+ DPR
Sbjct: 9 LPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 39
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPS-AQCIAM 179
SN I+TG++ GIG TA A G V + RS ++ + IL S Q ++
Sbjct: 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLT 239
++ + K+F +++LV NAG + D F TT + ++ T
Sbjct: 64 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAG------AAIPDAFGTTGTDQGIDIYHKT 117
Query: 240 LQL 242
L+L
Sbjct: 118 LKL 120
>pdb|1K5R|A Chain A, Yap65 Ww Domain S24-Amino-Ethylsulfanyl-Acetic Acid
Mutant
Length = 41
Score = 36.2 bits (82), Expect = 0.023, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LP GWE T+ G Y++NH + T W PR
Sbjct: 9 LPAGWEMAKTSXGQRYFLNHIDQTTTWQDPR 39
Score = 29.6 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
LP GWE + + G+ F N T+ DPR
Sbjct: 9 LPAGWEMAKTSXGQRYFLNHIDQTTTWQDPR 39
>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
pdb|3TJR|B Chain B, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
Length = 301
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 121 LSNYN---AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCI 177
LS ++ A+VTG +GIG TA A G R++L+ A++ + + A +
Sbjct: 26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGV 85
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++ L + + A+E + ++++ NAG+
Sbjct: 86 VCDVR--HLDEMVRLADEAFRLLGGVDVVFSNAGI 118
>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid
Dehydrogenase: An Important Therapeutic Target For
Diabetes
pdb|1Y5M|B Chain B, The Crystal Structure Of Murine 11b-Hydroxysteroid
Dehydrogenase: An Important Therapeutic Target For
Diabetes
pdb|1Y5R|A Chain A, The Crystal Structure Of Murine 11b-hydroxysteroid
Dehydrogenase Complexed With Corticosterone
pdb|1Y5R|B Chain B, The Crystal Structure Of Murine 11b-hydroxysteroid
Dehydrogenase Complexed With Corticosterone
Length = 276
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL-TEKPSAQCIAM 179
L IVTGA+ GIG E A L+ G V+L RS + +S+ L SA IA
Sbjct: 16 LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 75
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLN 209
+ + ++F + K L++L+LN
Sbjct: 76 TME--DMTFAEQFIVKAGKLMGGLDMLILN 103
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L N AIVTG IG +LA G RVI+A A A+ + E + M+
Sbjct: 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
+ +SV+ ++ ++ILV AG+
Sbjct: 71 VT--NTESVQNAVRSVHEQEGRVDILVACAGI 100
>pdb|2LAX|A Chain A, Structure Of First Ww Domain Of Human Yap In Complex
With A Human Smad1 Doubly-Phosphorilated Derived
Peptide
Length = 40
Score = 36.2 bits (82), Expect = 0.024, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LP GWE T+ G Y++NH + T W PR
Sbjct: 8 LPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 38
Score = 29.6 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
LP GWE + + G+ F N T+ DPR
Sbjct: 8 LPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 38
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILA--CR---SLDKANDAISKI-----LTEKPSAQ 175
A +TGA G G A LA G ++ CR +LD A + ++ L E+ +
Sbjct: 49 AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR 108
Query: 176 CIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHL 233
IA + ++ L S++ +E +F ++ILV N G+ G S T+ + Q N +
Sbjct: 109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLI 168
Query: 234 AHFYLTLQLENALIKGAKLFARQQGAATSIYCATSLDL 271
++ + ++I+ R QG + I+ ++++ L
Sbjct: 169 GAWHACRAVLPSMIE------RGQGGSV-IFVSSTVGL 199
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
+VTGA+ GIG A SL GC+V++ KA + +SK + E Q I ++ +
Sbjct: 5 VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI-EAYGGQAITFGGDVSKE 63
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGV 212
V+ + + +++++V NAG+
Sbjct: 64 ADVEAMMKTAIDAWGTIDVVVNNAGI 89
>pdb|2DWV|A Chain A, Solution Structure Of The Second Ww Domain From Mouse
Salvador Homolog 1 Protein (Mww45)
pdb|2DWV|B Chain B, Solution Structure Of The Second Ww Domain From Mouse
Salvador Homolog 1 Protein (Mww45)
Length = 49
Score = 36.2 bits (82), Expect = 0.025, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHP 46
LPPGWE +++ YYV+H + Q+ HP
Sbjct: 14 LPPGWERVESSEFGTYYVDHTNKRAQYRHP 43
>pdb|2LAY|A Chain A, Structure Of The First Ww Domain Of Human Yap In Complex
With A Phosphorylated Human Smad1 Derived Peptide
pdb|2LTW|A Chain A, Yap Ww1 In Complex With A Smad7 Derived Peptide
Length = 36
Score = 36.2 bits (82), Expect = 0.025, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
LP GWE T+ G Y++NH + T W PR
Sbjct: 4 LPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 34
Score = 29.6 bits (65), Expect = 2.6, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
LP GWE + + G+ F N T+ DPR
Sbjct: 4 LPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 34
>pdb|2ZAJ|A Chain A, Solution Structure Of The Short-Isoform Of The Second Ww
Domain From The Human Membrane-Associated Guanylate
Kinase, Ww And Pdz Domain-Containing Protein 1 (Magi-1)
Length = 49
Score = 36.2 bits (82), Expect = 0.028, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 12 DSEDELPPGWEERVTADGCVYYVNHATEGTQWTHP 46
DSE ELP GWE+ +YYV+H TQ+ +P
Sbjct: 9 DSELELPAGWEKIEDPVYGIYYVDHINRKTQYENP 43
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A+VTG+ +GIG A +LA G ++L + + L + + +
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
+L + ++V+ + ++ ++ILV NAG+
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI 93
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTG+ +GIG A +LA G ++L + + L + + + +L +
Sbjct: 7 AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
++V+ + ++ ++ILV NAG+
Sbjct: 67 GEAVRGLVDNAVRQMGRIDILVNNAGI 93
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA GIG E A+ LA VI R+ + + +I + + A +++ +
Sbjct: 47 ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS--K 104
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLE 243
+ + + + + ++++ILV NAG+ L D +E + N + FY+T +
Sbjct: 105 KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPIS 164
Query: 244 NALI 247
+I
Sbjct: 165 KRMI 168
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A+VTG+ +GIG A +LA G ++L + + L + + +
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
+L + ++V+ + ++ ++ILV NAG+
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI 93
>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|B Chain B, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|C Chain C, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|D Chain D, Crystal Structure Of A Mammalian Reductase
Length = 260
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
+ L N A+VT + GIG AR LA G V+++ R + + ++ + E S
Sbjct: 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV---FGLGFSHTEDGFETTFQVNHLAH 235
+ + + ++ ++ILV NA V FG TE+ ++ VN A
Sbjct: 70 CHVG--KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKAT 127
Query: 236 FYLT 239
+T
Sbjct: 128 VLMT 131
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL A+VTG++ G+G A LA+ G R+++ + + + A+ +A
Sbjct: 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAF 82
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++ + ++ FA ++ ++ILV NAG+
Sbjct: 83 DVT-SESEIIEAFARLDEQGI-DVDILVNNAGI 113
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A+VTG+ +GIG A+ LA G ++L A+++I + + +
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVL--NGFGDPAPALAEI--ARHGVKAVHHP 57
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
+L + ++ +++F ++ILV NAG+
Sbjct: 58 ADLSDVAQIEALFALAEREFGGVDILVNNAGI 89
>pdb|2YSD|A Chain A, Solution Structure Of The First Ww Domain From The Human
Membrane-Associated Guanylate Kinase, Ww And Pdz
Domain- Containing Protein 1. Magi-1
Length = 57
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 12 DSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPRTGVKKKVSG 56
D+ LP WE T +G VY+++H T+ T W PR + K+ SG
Sbjct: 10 DNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRC-LNKQQSG 53
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 56 GDLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRIV 90
G LP WE + +E+G++ F + +T ++ DPR +
Sbjct: 13 GPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCL 47
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 117 HGR-DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQ 175
GR L A+VTG + GIG+ LA G RV C +K D +I EK
Sbjct: 14 EGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARV-YTCSRNEKELDECLEIWREKG--- 69
Query: 176 CIAMELNLCRL-------KSVKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFET 226
+ +E ++C L K ++ A + K LNILV NAGV TE +
Sbjct: 70 -LNVEGSVCDLLSRTERDKLMQTVAHVFDGK---LNILVNNAGVVIHKEAKDFTEKDYNI 125
Query: 227 TFQVNHLAHFYLTLQLENALIKGAK 251
N A ++L+ Q+ L+K ++
Sbjct: 126 IMGTNFEAAYHLS-QIAYPLLKASQ 149
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L + A++TG GIG A A+ G + +A L A +A + I + + ++
Sbjct: 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAI--RNLGRRVLTVK 60
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFET---TFQVNHLAHFY 237
++ + V+ F ++ F +ILV NAG++ L E FE TF++N + F
Sbjct: 61 CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPL-IPFDELTFEQWKKTFEINVDSGFL 119
Query: 238 LTLQLENALIKGAK 251
+ A + G K
Sbjct: 120 MA----KAFVPGMK 129
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 42/211 (19%)
Query: 127 IVTGANTGIGFETARSLALHGCRV---------ILACRSLDKANDAISKILTEKPSAQCI 177
++TGA GIG R++AL R +L S A+ EK S +C
Sbjct: 6 LITGAGKGIG----RAIALEFARAARHHPDFEPVLVLSSRTAAD-------LEKISLECR 54
Query: 178 A-------MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV--FGLGFSHTEDGFETTF 228
A + ++ + V++ +++ ++ LV NAGV FG TE+ F+ T
Sbjct: 55 AEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTM 114
Query: 229 QVNHLAHFYLTLQLENALIK---GAKLFARQQGAAT------SIYCATSL-DLSLPVSGS 278
N F+LT Q AL++ +F AAT SIYC + L +
Sbjct: 115 NTNLKGTFFLT-QALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMR 173
Query: 279 YFNNCCRCPPSKAAQDEALATKLW-KLSEEM 308
+ C + Q A+ T +W K+ +EM
Sbjct: 174 LYARKCNVRITD-VQPGAVYTPMWGKVDDEM 203
>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFM|B Chain B, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFN|B Chain B, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|A Chain A, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|C Chain C, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|D Chain D, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
Length = 258
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILT--EKPSAQCI 177
DL ++TG++ GIG TAR A G +V L R KA I + +
Sbjct: 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGR---KAPANIDETIASMRADGGDAA 60
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAG 211
+L ++ ++ +E+ KF +++L+ NAG
Sbjct: 61 FFAADLATSEACQQLVDEFVAKFGGIDVLINNAG 94
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVIL 152
DL+ A+VTG+ G+GF A LA G RVIL
Sbjct: 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVIL 38
>pdb|1JMQ|A Chain A, Yap65 (L30k Mutant) Ww Domain In Complex With Gtppppytvg
Peptide
Length = 46
Score = 35.4 bits (80), Expect = 0.048, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 17 LPPGWEERVTADGCVYYVNHATEGTQWTHPRTGV 50
LP GWE T+ G Y+ NH + T W PR +
Sbjct: 9 LPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKAM 42
Score = 29.3 bits (64), Expect = 2.8, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 58 LPLGWEKSVSEDGKITFYNKDTHVKTYTDPR 88
LP GWE + + G+ F N T+ DPR
Sbjct: 9 LPAGWEMAKTSSGQRYFKNHIDQTTTWQDPR 39
>pdb|2LB0|A Chain A, Structure Of The First Ww Domain Of Human Smurf1 In
Complex With A Di- Phosphorylated Human Smad1 Derived
Peptide
Length = 36
Score = 35.4 bits (80), Expect = 0.048, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 16 ELPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
ELP G+E+R T G VY+++ T + W PR
Sbjct: 4 ELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPR 35
Score = 32.3 bits (72), Expect = 0.33, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 57 DLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
+LP G+E+ + G++ F + T V T+ DPRI
Sbjct: 4 ELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRI 36
>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
Length = 322
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 127 IVTGANTGIGFETARSLALHGCRVIL--ACRSLD----KANDAISKILTEKPSA--QCIA 178
IVTGA GIG A + A G RV++ LD A ++ E +A + +A
Sbjct: 31 IVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVA 90
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHF 236
N+ + + F L++LV NAG+ + + +E+ F+ V+ HF
Sbjct: 91 DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHF 150
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A+VTG+ +GIG A LA G V++ + + L K + +
Sbjct: 2 LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
+L ++ + F + + L+ILV NAG+
Sbjct: 62 ADLSDAQATRDFIAKAAEALGGLDILVNNAGI 93
>pdb|1EG3|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex
With A Beta-Dystroglycan Peptide
pdb|1EG4|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex
With A Beta-Dystroglycan Peptide
Length = 261
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 21 WEERVTADGCVYYVNHATEGTQWTHPRTGVKKKVSGDL 58
WE ++ + YY+NH T+ T W HP+ + DL
Sbjct: 16 WERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADL 53
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 18/132 (13%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME----- 180
++TGA GIG TA A +++L I+K E+ +A+C +
Sbjct: 34 VLITGAGHGIGRLTAYEFAKLKSKLVLW---------DINKHGLEETAAKCKGLGAKVHT 84
Query: 181 --LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHF 236
++ + + A++ + + ++ILV NAGV F+ + E TF+VN LAHF
Sbjct: 85 FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 144
Query: 237 YLTLQLENALIK 248
+ T A+ K
Sbjct: 145 WTTKAFLPAMTK 156
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCI-AMELNLC 184
AI+TG++ GIG TA A G +V + R ++ + +IL S Q + ++ ++
Sbjct: 9 AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAG 211
+ KF L+ILV NAG
Sbjct: 69 TDAGQDEILSTTLGKFGKLDILVNNAG 95
>pdb|2LAZ|A Chain A, Structure Of The First Ww Domain Of Human Smurf1 In
Complex With A Mono-Phosphorylated Human Smad1 Derived
Peptide
Length = 33
Score = 35.0 bits (79), Expect = 0.058, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 16 ELPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
ELP G+E+R T G VY+++ T + W PR
Sbjct: 1 ELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPR 32
Score = 32.3 bits (72), Expect = 0.40, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 57 DLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
+LP G+E+ + G++ F + T V T+ DPRI
Sbjct: 1 ELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRI 33
>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As
3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh),
Endoplasmic Reticulum- Associated Amyloid Beta-peptide
Binding Protein (erab)]
Length = 261
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 13/126 (10%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
R + A++TG +G+G TA L G +L LD N + +K C+
Sbjct: 6 RSVKGLVAVITGGASGLGLATAERLVGQGASAVL----LDLPNSG-GEAQAKKLGNNCVF 60
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV------FGL--GFSHTEDGFETTFQV 230
++ K V+ + KF +++ V AG+ + L G +HT + F+ V
Sbjct: 61 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 231 NHLAHF 236
N + F
Sbjct: 121 NLMGTF 126
>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
pdb|2O23|B Chain B, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
Length = 265
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 13/126 (10%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
R + A++TG +G+G TA L G +L LD N + +K C+
Sbjct: 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVL----LDLPNSG-GEAQAKKLGNNCVF 62
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV------FGL--GFSHTEDGFETTFQV 230
++ K V+ + KF +++ V AG+ + L G +HT + F+ V
Sbjct: 63 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122
Query: 231 NHLAHF 236
N + F
Sbjct: 123 NLMGTF 128
>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase
pdb|1IY8|B Chain B, Crystal Structure Of Levodione Reductase
pdb|1IY8|C Chain C, Crystal Structure Of Levodione Reductase
pdb|1IY8|D Chain D, Crystal Structure Of Levodione Reductase
pdb|1IY8|E Chain E, Crystal Structure Of Levodione Reductase
pdb|1IY8|F Chain F, Crystal Structure Of Levodione Reductase
pdb|1IY8|G Chain G, Crystal Structure Of Levodione Reductase
pdb|1IY8|H Chain H, Crystal Structure Of Levodione Reductase
Length = 267
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
++TG +G+G TA LA G ++ L S + + + +L P A+ + ++
Sbjct: 17 LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVFGL-----GFSHTEDGFETTFQVNHLAHFYLTLQ 241
V+ + ++F ++ NAG+ G F+ E F+ +N F L
Sbjct: 77 AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAE--FDKVVSINLRGVF---LG 131
Query: 242 LENALIKGAKLFARQQGAATSIYCAT 267
LE L K+ R+QG+ + A+
Sbjct: 132 LEKVL----KIM-REQGSGMVVNTAS 152
>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|B Chain B, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|C Chain C, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|D Chain D, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
Length = 261
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 13/126 (10%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
R + A++TG +G+G TA L G +L LD N + +K C+
Sbjct: 6 RSVKGLVAVITGGASGLGLATAERLVGQGASAVL----LDLPNSG-GEAQAKKLGNNCVF 60
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV------FGL--GFSHTEDGFETTFQV 230
++ K V+ + KF +++ V AG+ + L G +HT + F+ V
Sbjct: 61 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 120
Query: 231 NHLAHF 236
N + F
Sbjct: 121 NLMGTF 126
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A++TG+ +GIG AR+LA G ++L ++ + S + + +
Sbjct: 28 AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXTK 87
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
+ +F +ILV NAGV
Sbjct: 88 PSEIADXXAXVADRFGGADILVNNAGV 114
>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTD|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTE|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTE|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTX|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
pdb|2DTX|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
Length = 264
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL + IVTGA+ GIG A R +D+ + I + + A+ +
Sbjct: 5 DLRDKVVIVTGASMGIGRAIAE-------------RFVDEGSKVIDLSIHDPGEAKYDHI 51
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV--FGLGFSHTEDGFETTFQVNHLAHFY 237
E ++ VK + K++ S+++LV NAG+ +G S + + VN ++Y
Sbjct: 52 ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYY 111
>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
pdb|3VC7|B Chain B, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
Length = 254
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 121 LSNYN---AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCI 177
+ NY AIV G G G T R L G V+L R +++N I++I E+ +
Sbjct: 2 VGNYQGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGR--NESN--IARI-REEFGPRVH 56
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGL-GFSH-TEDGFETTFQVNHLAH 235
A+ ++ L + + ++++L +NAGV L F +E ++ F VN
Sbjct: 57 ALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGA 116
Query: 236 FYLTLQLENALIK 248
F+ T+Q LI+
Sbjct: 117 FF-TVQRLTPLIR 128
>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy
Benzoate Dehydrogenase
Length = 250
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 25/145 (17%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEK--PSAQCI 177
D S N VTGA GIG+ TA + G +V D+A T++ P A +
Sbjct: 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVT----GFDQA-------FTQEQYPFATEV 52
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSH--TEDGFETTFQVNHLAH 235
+++ V + + + L+ LV AG+ +G + +++ ++ TF VN
Sbjct: 53 ---MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGA 109
Query: 236 FYLTLQLENALIKGAKLFARQQGAA 260
F L Q N F RQ+G A
Sbjct: 110 FNLFQQTMNQ-------FRRQRGGA 127
>pdb|3L4H|A Chain A, Helical Box Domain And Second Ww Domain Of The Human E3
Ubiq Protein Ligase Hecw1
Length = 109
Score = 34.7 bits (78), Expect = 0.080, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 57 DLPLGWEKSVSEDGKITFYNKDTHVKTYTDPRI 89
+LP GWE + GK F + ++ T+ DPRI
Sbjct: 72 ELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRI 104
Score = 34.3 bits (77), Expect = 0.092, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 11 SDSEDELPPGWEERVTADGCVYYVNHATEGTQWTHPR 47
+D+ ELP GWE + G ++V+H + T + PR
Sbjct: 67 ADTRLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPR 103
>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
pdb|4E3Z|B Chain B, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
Length = 272
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
+VTG + GIG R A G RV + + +A DA+ +TE + +A+ ++
Sbjct: 30 LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAVAIPGDVGNA 88
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVF 213
+ ++F L+ LV NAG+
Sbjct: 89 ADIAAXFSAVDRQFGRLDGLVNNAGIV 115
>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 244
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 23/164 (14%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L+ +VTGA GIG T ++L G RV+ R+ + ++ E P + + ++
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT----QADLDSLVRECPGIEPVCVD 60
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHFYL 238
L + E +++LV NA V L T++ F+ +F+VN A +
Sbjct: 61 LGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 239 TLQLENALIK----GAKLFARQQGAAT-----SIYCAT--SLDL 271
+ + LI GA + Q + S+YC+T +LD+
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDM 158
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A+VTGANTG+G A LA G V+ A R +A D I+ K A+
Sbjct: 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAAR---RAPDETLDIIA-KDGGNASALL 62
Query: 181 LNLCR-LKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFS--HTEDGFETTFQVNHLAHFY 237
++ L + F + +ILV NAG+ S +E ++ VN A F+
Sbjct: 63 IDFADPLAAKDSFTDA------GFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFF 116
Query: 238 LT 239
T
Sbjct: 117 TT 118
>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|C Chain C, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|D Chain D, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|3LQF|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|2WSB|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
Length = 254
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACR---SLDKA 160
A VTGA +GIG E R+ A G R+IL R +LD+A
Sbjct: 14 AAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA 51
>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|B Chain B, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|C Chain C, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|D Chain D, Carbonyl Reductase Complexed With Nadph And 2-Propanol
Length = 244
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
+ S A+VTGA GIG +T ++L G +V+ R+ N + + E P + + +
Sbjct: 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT----NSDLVSLAKECPGIEPVCV 59
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHFY 237
+L E+ +++LV NA + + T++ F+ +F VN + F
Sbjct: 60 DLGDW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQ 113
Query: 238 LTLQLENALI 247
++ + +I
Sbjct: 114 VSQMVARDMI 123
>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
pdb|2ZK7|B Chain B, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
Length = 257
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL + IVTGA+ GIG A R +D+ + I + + A+ +
Sbjct: 12 DLRDKVVIVTGASMGIGRAIAE-------------RFVDEGSKVIDLSIHDPGEAKYDHI 58
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV--FGLGFSHTEDGFETTFQVNHLAHFY 237
E ++ VK + K++ S+++LV NAG+ +G S + + VN ++Y
Sbjct: 59 ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYY 118
>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|B Chain B, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|C Chain C, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|D Chain D, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|E Chain E, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|F Chain F, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|G Chain G, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|H Chain H, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
Length = 256
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTE---KPSAQCIAMELN 182
A+VTGA GIG A L G V +A NDA +K + + +A++++
Sbjct: 5 ALVTGAGQGIGKAIALRLVKDGFAVAIA-----DYNDATAKAVASEINQAGGHAVAVKVD 59
Query: 183 LCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
+ V E+ +K +++V NAGV
Sbjct: 60 VSDRDQVFAAVEQARKTLGGFDVIVNNAGV 89
>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OIC|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OID|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|B Chain B, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|C Chain C, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
Length = 258
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 19/173 (10%)
Query: 123 NYNAIVTGANTGIGFETARSLALHGCRVILA-CRSLDKANDAISKILTEKPSAQCIAMEL 181
N A+VTG++ G+G A LA +G +++ RS A + +I EK + + ++
Sbjct: 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEI--EKLGVKVLVVKA 61
Query: 182 NLCRLKSVKKFAEEYQKKFRSLNILVLNA--GVFGLGFSHTEDGFETTFQVNHLAHFYLT 239
N+ + +K+ ++ + F L++ V NA GV E ++ T +N A +
Sbjct: 62 NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCA 121
Query: 240 LQLENALIKGAKLFARQQGAATSIYCATSLDLSLPVSGSYFNNCCRCPPSKAA 292
+ AKL + G I +SL S Y N SKAA
Sbjct: 122 QE-------AAKLMEKNGGG--HIVSISSLG-----SIRYLENYTTVGVSKAA 160
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 126 AIVTGANTGIGFETARSLALHGCRV-ILACRSLDKANDAISKILTEKPSAQCIAMELNLC 184
A+VTGA+ GIG A+ LA G V I ++A + + +I + SA I NL
Sbjct: 10 ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA--NLE 67
Query: 185 RLKSVK----KFAEEYQKKFRS--LNILVLNAGVFGLGF--SHTEDGFETTFQVNHLAHF 236
L V+ E Q + S +IL+ NAG+ F TE F+ VN A F
Sbjct: 68 SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNAKAPF 127
Query: 237 YLTLQ 241
++ Q
Sbjct: 128 FIIQQ 132
>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
R + A++TG +G+G TA+ L G +L LD N + +K CI
Sbjct: 6 RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVL----LDVPNSE-GETEAKKLGGNCIF 60
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFS---------HTEDGFETTFQ 229
N+ K V+ ++KF +++ V AG+ + HT + F+
Sbjct: 61 APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGI-AVAIKTYHEKKNQVHTLEDFQRVIN 119
Query: 230 VNHLAHF 236
VN + F
Sbjct: 120 VNLIGTF 126
>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
R + A++TG +G+G TA+ L G +L LD N + +K CI
Sbjct: 6 RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVL----LDVPNSE-GETEAKKLGGNCIF 60
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFS---------HTEDGFETTFQ 229
N+ K V+ ++KF +++ V AG+ + HT + F+
Sbjct: 61 APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGI-AVAIKTYHEKKNQVHTLEDFQRVIN 119
Query: 230 VNHLAHF 236
VN + F
Sbjct: 120 VNLIGTF 126
>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|B Chain B, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|C Chain C, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|D Chain D, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
Length = 255
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 122 SNYN---AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
NY AIV G G G T R L G V+L R +++N I++I E+ + A
Sbjct: 4 GNYQGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGR--NESN--IARI-REEFGPRVHA 58
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGL-GFSH-TEDGFETTFQVNHLAHF 236
+ ++ L + + ++++L +NAGV L F +E ++ F VN F
Sbjct: 59 LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAF 118
Query: 237 YLTLQLENALIK 248
+ T+Q LI+
Sbjct: 119 F-TVQRLTPLIR 129
>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
Length = 260
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 119 RDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIA 178
R + A++TG +G+G TA+ L G +L LD N + +K CI
Sbjct: 5 RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVL----LDVPNSE-GETEAKKLGGNCIF 59
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFS---------HTEDGFETTFQ 229
N+ K V+ ++KF +++ V AG+ + HT + F+
Sbjct: 60 APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGI-AVAIKTYHEKKNQVHTLEDFQRVIN 118
Query: 230 VNHLAHF 236
VN + F
Sbjct: 119 VNLIGTF 125
>pdb|3GEM|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|C Chain C, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3GEM|D Chain D, Crystal Structure Of Short-Chain Dehydrogenase From
Pseudomonas Syringae
Length = 260
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
LS+ ++TGA+ +G A L HG RVI++ R+ + +TE A +A+
Sbjct: 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS-------VTELRQAGAVALY 77
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTE--DGFETTFQVNHLAHFYL 238
+ + F + + + SL +V NA + L + E D F F V+ LA + +
Sbjct: 78 GDFSCETGIXAFIDLLKTQTSSLRAVVHNASEW-LAETPGEEADNFTRXFSVHXLAPYLI 136
Query: 239 TLQLENAL 246
L E L
Sbjct: 137 NLHCEPLL 144
>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme
pdb|1PR9|B Chain B, Human L-Xylulose Reductase Holoenzyme
pdb|1WNT|A Chain A, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|B Chain B, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|C Chain C, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|D Chain D, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
Length = 244
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L+ +VTGA GIG T ++L G RV+ ++ + + ++ E P + + ++
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVV----AVSRTQADLDSLVRECPGIEPVCVD 60
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHFYL 238
L + E +++LV NA V L T++ F+ +F+VN A +
Sbjct: 61 LGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 239 TLQLENALIK----GAKLFAR---QQGAAT--SIYCAT--SLDL 271
+ + LI GA + Q A T S+YC+T +LD+
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDM 158
>pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 245
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 24/165 (14%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L+ +VTGA GIG T ++L G RV+ ++ + + ++ E P + + ++
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVV----AVSRTQADLDSLVRECPGIEPVCVD 60
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHFYL 238
L + E +++LV NA V L T++ F+ +F+VN A +
Sbjct: 61 LGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 239 TLQLENALIK----GAKLFARQQGAAT------SIYCAT--SLDL 271
+ + LI GA + Q + S+YC+T +LD+
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCXSQRAVTNHSVYCSTKGALDM 159
>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|B Chain B, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|C Chain C, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|D Chain D, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
Length = 257
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
I+TG ++G G A A G RV++ R+ +K +A K+ E+ Q + ++ ++
Sbjct: 10 IITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEA--KLEIEQFPGQILTVQXDVRNT 67
Query: 187 KSVKKFAEEYQKKFRSLNILVLNA 210
++K E+ +KF ++IL+ NA
Sbjct: 68 DDIQKXIEQIDEKFGRIDILINNA 91
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTG GIG + LA G + +A + A + L E + + + L++
Sbjct: 5 AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD 64
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHLAHFY 237
+ +E +K ++LV NAG+ + TE+ + + VN + F+
Sbjct: 65 KANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFF 118
>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
pdb|3KVO|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
Length = 346
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 118 GRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCI 177
GR L+ +TGA+ GIG A A G +++A ++ + I T + +
Sbjct: 41 GR-LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV 99
Query: 178 AMELNLCRL-----KSVKKFAEEYQKKFRSLNILVLNAGVFGL 215
+ C + + + E+ KKF ++ILV NA L
Sbjct: 100 GGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISL 142
>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
Length = 261
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A++TGA +G G A+ A G +V++ R DKA ++ E A +A+
Sbjct: 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDR--DKAG--AERVAGEIGDA-ALAVA 61
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++ + V E KF ++ILV NAG+
Sbjct: 62 ADISKEADVDAAVEAALSKFGKVDILVNNAGI 93
>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional
Enzyme Type 2 From Drosophila Melanogaster
Length = 613
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVIL----ACRSLDKANDAISKILTE---KPSAQCIA 178
A+VTGA G+G E A A G +V++ S D A+ + I+ + K + +A
Sbjct: 22 AVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVA 81
Query: 179 MELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF 213
+ + K E K F ++ILV NAG+
Sbjct: 82 ---DYNSVIDGAKVIETAIKAFGRVDILVNNAGIL 113
>pdb|2L5F|A Chain A, Solution Structure Of The Tandem Ww Domains From
HypaFBP11
Length = 92
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 21 WEERVTADGCVYYVNHATEGTQWTHP---RTGVKKKVSGDLPLGWEKSVSEDGKITFYNK 77
W E + DG YY N T+ + W P +T ++ +S W++ S+ GK +YN
Sbjct: 16 WTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSK---CPWKEYKSDSGKTYYYNS 72
Query: 78 DTHVKTYTDPR 88
T + P+
Sbjct: 73 QTKESRWAKPK 83
>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|B Chain B, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|C Chain C, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|D Chain D, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|E Chain E, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|F Chain F, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|G Chain G, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|H Chain H, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
Length = 266
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A++TGA GIG + AR+ A G R++L+ R + + DA + L E+ +
Sbjct: 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSEL-DAARRALGEQFGTDVHTVA 76
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDG-------FETTFQVNHL 233
++L + + A + F L++LV NAG+ SH + F+ T VN
Sbjct: 77 IDLAEPDAPAELARRAAEAFGGLDVLVNNAGI-----SHPQPVVDTDPQLFDATIAVNLR 131
Query: 234 AHFYLTLQLENALI 247
A L + A++
Sbjct: 132 APALLASAVGKAMV 145
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
Length = 247
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L+ A+VTGA GIG A LA G VI++ N +K + A+
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVS-----DINAEGAKAAAASIGKKARAIA 58
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++ SVK E Q ++ILV NA +
Sbjct: 59 ADISDPGSVKALFAEIQALTGGIDILVNNASI 90
>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|B Chain B, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|C Chain C, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|D Chain D, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
Length = 253
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTG +G+G E + L G +V + N+A + L + + + + ++
Sbjct: 9 ALVTGGASGVGLEVVKLLLGEGAKV-----AFSDINEAAGQQLAAELGERSMFVRHDVSS 63
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGVF 213
Q++ +LN+LV NAG+
Sbjct: 64 EADWTLVMAAVQRRLGTLNVLVNNAGIL 91
>pdb|2JXW|A Chain A, Solution Structure Of The Tandem Ww Domains Of Fbp21
Length = 75
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 21 WEERVTADGCVYYVNHATEGTQWTHPR--TGVKKKVSGDLPLGWEKSVSEDGKITFYNKD 78
W E +T++G YY + + +QW P G KK + + W + +SEDG +YN +
Sbjct: 7 WVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTA--VKTVWVEGLSEDGFTYYYNTE 64
Query: 79 THVKTYTDP 87
T + P
Sbjct: 65 TGESRWEKP 73
>pdb|1H5V|A Chain A, Thiopentasaccharide Complex Of The Endoglucanase Cel5a
From Bacillus Agaradharens At 1.1 A Resolution In The
Tetragonal Crystal Form
Length = 304
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query: 162 DAISKILTEKPSAQC-IAMELNLCRL---KSVKKFAEEYQKKFRSL---NILVLNAGVFG 214
D +S++ + P+ IA E N + +K +AEE R+ NI+++ G +
Sbjct: 120 DEMSELYGDYPNVIYEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWS 179
Query: 215 LGFSHTEDGFETTFQVNHLAHFY-------LTLQLENALIKGAKLFARQQGAATS 262
H D V + HFY L Q++ AL +GA +F + G + +
Sbjct: 180 QDVHHAADNQLADPNVMYAFHFYAGTHGQNLRDQVDYALDQGAAIFVSEWGTSAA 234
>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|A Chain A, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|B Chain B, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|D Chain D, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
Length = 271
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
++TG + GIG +A A G V + S A D + + + E Q +A++ ++ +
Sbjct: 29 LITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIRE-AGGQALAVQADVAKE 87
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVF 213
+ V E + L+ LV NAGV
Sbjct: 88 REVLAXFETVDAQLGRLSALVNNAGVV 114
>pdb|1LF1|A Chain A, Crystal Structure Of Cel5 From Alkalophilic Bacillus Sp
Length = 308
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 162 DAISKILTEKPSAQC-IAMELNLCRL---KSVKKFAEEYQKKFRSL---NILVLNAGVFG 214
D +S++ + P+ IA E N + +K +AEE R NI+++ G +
Sbjct: 120 DEMSELYGDYPNVIYEIANEPNGSDVTWDNQIKPYAEEVIPVIRDNDPNNIVIVGTGTWS 179
Query: 215 LGFSHTEDGFETTFQVNHLAHFY-------LTLQLENALIKGAKLFARQQGAATS 262
H D V + HFY L Q++ AL +GA +F + G + +
Sbjct: 180 QDVHHAADNQLADPNVMYAFHFYAGTHGQNLRDQVDYALDQGAAIFVSEWGTSAA 234
>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus
Thermophilus Hb8
pdb|2EKP|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|B Chain B, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|C Chain C, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|D Chain D, Structure Of Tt0495 Protein From Thermus Thermophilus
Length = 239
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 125 NAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKI 167
A+VTG + GIG A +L G RV +A R+ ++A ++ +
Sbjct: 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV 46
>pdb|4A3H|A Chain A, 2',4' Dinitrophenyl-2-Deoxy-2-Fluro-B-D-Cellobioside
Complex Of The Endoglucanase Cel5a From Bacillus
Agaradhaerens At 1.6 A Resolution
pdb|5A3H|A Chain A, 2-Deoxy-2-Fluro-B-D-CellobiosylENZYME INTERMEDIATE COMPLEX
Of The Endoglucanase Cel5a From Bacillus Agaradhearans
At 1.8 Angstroms Resolution
pdb|6A3H|A Chain A, 2-Deoxy-2-Fluro-B-D-CellotriosylENZYME INTERMEDIATE
COMPLEX OF THE Endoglucanase Cel5a From Bacillus
Agaradhearans At 1.6 Angstrom Resolution
pdb|7A3H|A Chain A, Native Endoglucanase Cel5a Catalytic Core Domain At 0.95
Angstroms Resolution
pdb|8A3H|A Chain A, Cellobiose-derived Imidazole Complex Of The Endoglucanase
Cel5a From Bacillus Agaradhaerens At 0.97 A Resolution
pdb|1HF6|A Chain A, Endoglucanase Cel5a From Bacillus Agaradhaerens In The
Orthorhombic Crystal Form In Complex With Cellotriose
pdb|1H11|A Chain A, 2-Deoxy-2-Fluro-B-D-CellotriosylENZYME INTERMEDIATE
Complex Of The Endoglucanase Cel5a From Bacillus
Agaradhearans At 1.08 Angstrom Resolution
pdb|1H2J|A Chain A, Endoglucanase Cel5a In Complex With Unhydrolysed And
Covalently Linked 2,4-Dinitrophenyl-2-Deoxy-2-
Fluoro-Cellobioside At 1.15 A Resolution
pdb|1OCQ|A Chain A, Complex Of The Endoglucanase Cel5a From Bacillus
Agaradhearans At 1.08 Angstrom Resolution With
Cellobio-Derived Isofagomine
pdb|1W3K|A Chain A, Endoglucanase Cel5a From Bacillus Agaradhaerens In Complex
With Cellobio Derived-tetrahydrooxazine
pdb|1W3L|A Chain A, Endoglucanase Cel5a From Bacillus Agaradhaerens In Complex
With Cellotri Derived-Tetrahydrooxazine
Length = 303
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query: 162 DAISKILTEKPSAQC-IAMELNLCRL---KSVKKFAEEYQKKFRSL---NILVLNAGVFG 214
D +S++ + P+ IA E N + +K +AEE R+ NI+++ G +
Sbjct: 120 DEMSELYGDYPNVIYEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWS 179
Query: 215 LGFSHTEDGFETTFQVNHLAHFY-------LTLQLENALIKGAKLFARQQGAATS 262
H D V + HFY L Q++ AL +GA +F + G + +
Sbjct: 180 QDVHHAADNQLADPNVMYAFHFYAGTHGQNLRDQVDYALDQGAAIFVSEWGTSAA 234
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L+ A+VTGA GIG A LA G VI++ N +K + A+
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVS-----DINAEGAKAAAASIGKKARAIA 58
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++ SVK E Q ++ILV NA +
Sbjct: 59 ADISDPGSVKALFAEIQALTGGIDILVNNASI 90
>pdb|1QHZ|A Chain A, Native Tetragonal Structure Of The Endoglucanase Cel5a
From Bacillus Agaradhaerens
pdb|1QI0|A Chain A, Endoglucanase Cel5a From Bacillus Agaradhaerens In The
Tetragonal Crystal Form In Complex With Cellobiose
pdb|1QI2|A Chain A, Endoglucanase Cel5a From Bacillus Agaradhaerens In The
Tetragonal Crystal Form In Complex With
2',4'-Dinitrophenyl 2-Deoxy-2-Fluoro-B- D-Cellotrioside
pdb|1E5J|A Chain A, Endoglucanase Cel5a From Bacillus Agaradhaerens In The
Tetragonal Crystal Form In Complex With
Methyl-4ii-S-Alpha-Cellobiosyl-4ii-Thio
Beta-Cellobioside
pdb|2V38|A Chain A, Family 5 Endoglucanase Cel5a From Bacillus Agaradhaerens
In Complex With Cellobio-Derived Noeuromycin
Length = 305
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query: 162 DAISKILTEKPSAQC-IAMELNLCRL---KSVKKFAEEYQKKFRSL---NILVLNAGVFG 214
D +S++ + P+ IA E N + +K +AEE R+ NI+++ G +
Sbjct: 120 DEMSELYGDYPNVIYEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWS 179
Query: 215 LGFSHTEDGFETTFQVNHLAHFY-------LTLQLENALIKGAKLFARQQGAATS 262
H D V + HFY L Q++ AL +GA +F + G + +
Sbjct: 180 QDVHHAADNQLADPNVMYAFHFYAGTHGQNLRDQVDYALDQGAAIFVSEWGTSAA 234
>pdb|1A3H|A Chain A, Endoglucanase Cel5a From Bacillus Agaradherans At 1.6a
Resolution
pdb|2A3H|A Chain A, Cellobiose Complex Of The Endoglucanase Cel5a From
Bacillus Agaradherans At 2.0 A Resolution
pdb|3A3H|A Chain A, Cellotriose Complex Of The Endoglucanase Cel5a From
Bacillus Agaradherans At 1.6 A Resolution
Length = 300
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query: 162 DAISKILTEKPSAQC-IAMELNLCRL---KSVKKFAEEYQKKFRSL---NILVLNAGVFG 214
D +S++ + P+ IA E N + +K +AEE R+ NI+++ G +
Sbjct: 117 DEMSELYGDYPNVIYEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWS 176
Query: 215 LGFSHTEDGFETTFQVNHLAHFY-------LTLQLENALIKGAKLFARQQGAATS 262
H D V + HFY L Q++ AL +GA +F + G + +
Sbjct: 177 QDVHHAADNQLADPNVMYAFHFYAGTHGQNLRDQVDYALDQGAAIFVSEWGTSAA 231
>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|B Chain B, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|C Chain C, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|D Chain D, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
Length = 269
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDA-ISKILTEKPSAQCIAMELNLC 184
AIVTG ++GIG +L +G +V+ SLD+ +D +S ++++
Sbjct: 17 AIVTGGSSGIGLAVVDALVRYGAKVV--SVSLDEKSDVNVSD-----------HFKIDVT 63
Query: 185 RLKSVKKFAEEYQKKFRSLNILVLNAGV 212
+ VK+ E+ KK+ ++ILV NAG+
Sbjct: 64 NEEEVKEAVEKTTKKYGRIDILVNNAGI 91
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
AIVTGA +G+G A +LA G V LA R LD + ++I + A C+ ++
Sbjct: 31 AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD---ALCVPTDVT--D 85
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAG 211
SV+ +KF +++L NAG
Sbjct: 86 PDSVRALFTATVEKFGRVDVLFNNAG 111
>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph
pdb|3SJU|B Chain B, Hedamycin Polyketide Ketoreductase Bound To Nadph
Length = 279
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACR---SLDKANDAISKILTEKPSAQCIAMELN 182
A VTG ++GIG AR+LA G V R ++ A D + + + C +
Sbjct: 27 AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSC-----D 81
Query: 183 LCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG 216
+ V ++F + ILV +AG G G
Sbjct: 82 VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGG 115
>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh)
(Apoenyzme) From Lactobacillus Brevis
pdb|1ZK4|A Chain A, Structure Of R-specific Alcohol Dehydrogenase (wildtype)
From Lactobacillus Brevis In Complex With Acetophenone
And Nadp
Length = 251
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
AI+TG GIG A G +V++ R D A + T Q + +
Sbjct: 9 AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD---QIQFFQHDSSD 65
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
K + +K F ++ LV NAG+
Sbjct: 66 EDGWTKLFDATEKAFGPVSTLVNNAGI 92
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DLS I+TG G+G E AR G RV+LA LD+ A ++ L + Q
Sbjct: 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLA-DVLDEEGAATARELGDAARYQ---- 56
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTE--DGFETTFQVNHLAHF 236
L++ + ++ +++F S++ LV NAG+ F TE + F ++N F
Sbjct: 57 HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVF 115
>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|B Chain B, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|C Chain C, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|D Chain D, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
Length = 272
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 16/157 (10%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
+TGA +G G AR A G ++L R ++ A++ L+ K + + + L++
Sbjct: 25 FITGATSGFGEACARRFAEAGWSLVLTGRREERLQ-ALAGELSAK--TRVLPLTLDVRDR 81
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTE----DGFETTFQVNHLAHFYLTLQL 242
+ + ++F +L L+ NAG+ LG + D ++T N Y T L
Sbjct: 82 AAXSAAVDNLPEEFATLRGLINNAGL-ALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLL 140
Query: 243 ENALIKGAKLFARQQGAATSIYCATSLDLSLPVSGSY 279
LI GA SI S+ P GS+
Sbjct: 141 LPRLIA--------HGAGASIVNLGSVAGKWPYPGSH 169
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELN--- 182
A+VTGA+ GIGF A + A G ++ ND I++ L ++ A A +N
Sbjct: 37 ALVTGASYGIGFAIASAYAKAGATIVF--------ND-INQELVDRGMAAYKAAGINAHG 87
Query: 183 -LCRL---KSVKKFAEEYQKKFRSLNILVLNAGVF 213
+C + ++ + + + ++ILV NAG+
Sbjct: 88 YVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGII 122
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DLS I+TG G+G E AR G RV+LA LD+ A ++ L + Q
Sbjct: 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLA-DVLDEEGAATARELGDAARYQ---- 56
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTE--DGFETTFQVNHLAHF 236
L++ + ++ +++F S++ LV NAG+ F TE + F ++N F
Sbjct: 57 HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVF 115
>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 266
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILAC---RSLDKANDAISKI-LTEKPSAQCIAMELN 182
+ A TGIG TAR L G V+++ R L + D ++ + L + C +
Sbjct: 27 VTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVC-----D 81
Query: 183 LCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG 214
+ ++V + +K L++LV NAG+ G
Sbjct: 82 VTSTEAVDALITQTVEKAGRLDVLVNNAGLGG 113
>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase
pdb|2EHD|B Chain B, Crystal Structure Analysis Of Oxidoreductase
Length = 234
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
++TGA+ GIG TAR L G RV L R + +++ P + E + R
Sbjct: 9 LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARA 68
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGV 212
+ ++ F L+ LV NAGV
Sbjct: 69 VAA------MEEAFGELSALVNNAGV 88
>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZJZ|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK0|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZK1|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK2|A Chain A, Orthorhombic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|A Chain A, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|B Chain B, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|C Chain C, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|D Chain D, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|E Chain E, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|F Chain F, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|G Chain G, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|H Chain H, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
Length = 251
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
AI+TG GIG A G +V++ R D A + T Q + +
Sbjct: 9 AIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPD---QIQFFQHDSSD 65
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
K + +K F ++ LV NAG+
Sbjct: 66 EDGWTKLFDATEKAFGPVSTLVNNAGI 92
>pdb|4A5O|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa N5, N10-
Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase
(Fold)
pdb|4A5O|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa N5, N10-
Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase
(Fold)
pdb|4A5O|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa N5, N10-
Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase
(Fold)
pdb|4A5O|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa N5, N10-
Methylenetetrahydrofolate Dehydrogenase-Cyclohydrolase
(Fold)
Length = 286
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 118 GRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISK 166
G DL +A+V GA+ +G A L L GC V + R D +S+
Sbjct: 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSR 204
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
++TGA G+G E A+ A +G +V+ ++ DA +K + E +A A
Sbjct: 326 LITGAGAGLGKEYAKWFAKYGAKVV-----VNDFKDA-TKTVDEIKAAGGEAWPDQHDVA 379
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVF 213
K + + K+ +++ILV NAG+
Sbjct: 380 KDSEAIIKNVIDKYGTIDILVNNAGIL 406
>pdb|1LNS|A Chain A, Crystal Structure Analysis Of The X-Prolyl Dipeptidyl
Aminopeptidase From Lactococcus Lactis
Length = 763
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 97 ENPLDIRQKYDHSTKALQILHGRDLSNYNAIVTGANTGIGF-ETARSLALHGCRVILACR 155
E+P+D Q+ ++ +QI+ + ++T + +G + A LALH V L +
Sbjct: 174 ESPVDSEQRGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHDMNVELEEK 233
Query: 156 SLDKANDAISKILTEKPSAQCIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAG---- 211
+ + + + + L +K SA+ A EL + K+ +F + SLN L G
Sbjct: 234 TSHEIH--VEQKLPQKLSAK--AKELPIVD-KAPYRFTHGWT---YSLNDYFLTRGFASI 285
Query: 212 -VFGLGFSHTEDGFETT 227
V G+G + + DGF+T+
Sbjct: 286 YVAGVG-TRSSDGFQTS 301
>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
pdb|4IMR|B Chain B, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
Length = 275
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A+VTG++ GIG A LA G VIL +I+ +AQ +A +
Sbjct: 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNA 210
L+ E + ++ILV+NA
Sbjct: 91 LSEA---GAGTDLIERAEAIAPVDILVINA 117
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 15/122 (12%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
+VTG N GIG A+ LA G +V + R + P +E+++
Sbjct: 19 LVTGGNRGIGLAIAQRLAADGHKVAVTHRG------------SGAPKG-LFGVEVDVTDS 65
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVFGLGF--SHTEDGFETTFQVNHLAHFYLTLQLEN 244
+V + ++ + +LV NAG+ F TE+ FE N F + +
Sbjct: 66 DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 125
Query: 245 AL 246
++
Sbjct: 126 SM 127
>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|B Chain B, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|C Chain C, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|D Chain D, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
Length = 264
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQ-------CIA 178
A+VTGA +GIG + LA G V AC LD+A + L P ++ A
Sbjct: 10 ALVTGAGSGIGRAVSVRLAGEGATV-AAC-DLDRAAAQETVRLLGGPGSKEGPPRGNHAA 67
Query: 179 MELNLCRLKSVKKFAEEYQKKF-RSLNILVLNAGVFGLGF--SHTEDGFETTFQVNHLAH 235
+ ++ ++ + E+ Q F R +++V AG+ F +ED ++ VN
Sbjct: 68 FQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGT 127
Query: 236 FYLTLQLENALI 247
F +T AL+
Sbjct: 128 FLVTQAAAQALV 139
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 15/122 (12%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
+VTG N GIG A+ LA G +V + R + P +E+++
Sbjct: 39 LVTGGNRGIGLAIAQRLAADGHKVAVTHRG------------SGAPKG-LFGVEVDVTDS 85
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVFGLGF--SHTEDGFETTFQVNHLAHFYLTLQLEN 244
+V + ++ + +LV NAG+ F TE+ FE N F + +
Sbjct: 86 DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 145
Query: 245 AL 246
++
Sbjct: 146 SM 147
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
+VTGA G G R G +VI R ++ + L ++ +L++
Sbjct: 4 LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE-----LKDELGDNLYIAQLDVRNR 58
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGV-FGLGFSH---TEDGFETTFQVNHLAHFYLT 239
++++ ++ +++ILV NAG+ G+ +H ED +ET N+ Y+T
Sbjct: 59 AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVED-WETMIDTNNKGLVYMT 114
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 32/204 (15%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
AIVTGA++G G A G RV A D ++ L E A + R
Sbjct: 5 AIVTGASSGNGLAIATRFLARGDRV--------AALDLSAETLEETARTHWHAYADKVLR 56
Query: 186 LKS-------VKKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTE--DGFETTFQVNHL 233
+++ V ++F ++++LV NAG+ G G HT + F+ VN
Sbjct: 57 VRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVR 116
Query: 234 AHFY-LTLQLENALIKGAKLFARQQGAAT-------SIYCATS---LDLSLPVSGSYFNN 282
F L + L++GA + A+ S Y + L L+ V+ Y +
Sbjct: 117 GIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGS 176
Query: 283 CCRCPPSKAAQDEALATKLWKLSE 306
RC E T+ W+L +
Sbjct: 177 GIRCNAVCPGMIETPMTQ-WRLDQ 199
>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GED|B Chain B, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GEG|A Chain A, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
pdb|3GEG|B Chain B, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
Length = 247
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 24/136 (17%)
Query: 123 NYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKI-LTEKPSAQCIAMEL 181
N IVTG GIG + C +A D + I + EK SA
Sbjct: 2 NRGVIVTGGGHGIGKQI--------------CLDFLEAGDKVCFIDIDEKRSADFAKERP 47
Query: 182 NLCRLK-------SVKKFAEEYQKKFRSLNILVLNA--GVFGLGFSHTEDGFETTFQVNH 232
NL ++KKF E +K + +++LV NA G G+ S + F+ V
Sbjct: 48 NLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGL 107
Query: 233 LAHFYLTLQLENALIK 248
A + L+ + LIK
Sbjct: 108 KAPYELSRLCRDELIK 123
>pdb|2YSI|A Chain A, Solution Structure Of The First Ww Domain From The Mouse
Transcription Elongation Regulator 1, Transcription
Factor Ca150
Length = 40
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 21 WEERVTADGCVYYVNHATEGTQWTHP 46
W E T DG VYY N T + WT P
Sbjct: 12 WVENKTPDGKVYYYNARTRESAWTKP 37
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L A++TGA++GIG TAR+LA G V +A R ++K A+ LT A+ +E
Sbjct: 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLR-ALGDELT-AAGAKVHVLE 62
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQV--NHLAHFYL 238
L++ + V + L+ILV NAG+ LG D + T + N L Y+
Sbjct: 63 LDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYM 122
Query: 239 T-------LQLENALIKGAKLFARQQGAATSIYCAT 267
T L+ + +++ + + R ++Y AT
Sbjct: 123 TRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQAT 158
>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|G Chain G, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|I Chain I, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
Length = 280
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRS 156
AIVTGA++GIG A A G +V++ R+
Sbjct: 11 AIVTGASSGIGRAAALLFAREGAKVVVTARN 41
>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y93|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y99|A Chain A, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|2Y99|B Chain B, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|3ZV3|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV3|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV4|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV4|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV5|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV5|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV6|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
pdb|3ZV6|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
Length = 281
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAME 180
L+ A++TG +G+G G RV + LDK+ + + + L + +
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAV----LDKSAERLRE-LEVAHGGNAVGVV 57
Query: 181 LNLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 212
++ L+ K+ AE F ++ L+ NAG+
Sbjct: 58 GDVRSLQDQKRAAERCLAAFGKIDTLIPNAGI 89
>pdb|1LU9|A Chain A, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
pdb|1LU9|B Chain B, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
pdb|1LU9|C Chain C, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
pdb|1LUA|A Chain A, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
Complexed With Nadp
pdb|1LUA|B Chain B, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
Complexed With Nadp
pdb|1LUA|C Chain C, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
Complexed With Nadp
Length = 287
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 118 GRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKI 167
G + A+V +G +A LA G V+L R LDKA A +
Sbjct: 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSV 163
>pdb|1A4U|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1A4U|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1B16|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-3-pentanone
pdb|1B16|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-3-pentanone
pdb|1B14|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Binary
Complex With Nad+
pdb|1B14|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Binary
Complex With Nad+
pdb|1B15|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-Acetone
pdb|1B15|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-Acetone
pdb|1B2L|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis:
Ternary Complex With Nad-Cyclohexanone
pdb|1SBY|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
pdb|1SBY|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
Length = 254
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL+N N I A GIG +T+R L + + ++ A++++ P
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT-ALAELKAINPKVNITFH 60
Query: 180 ELNL-CRLKSVKKFAEEYQKKFRSLNILVLNAGVF 213
++ + KK ++ + ++++IL+ AG+
Sbjct: 61 TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL 95
>pdb|3RJ5|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ5|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|C Chain C, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|D Chain D, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|E Chain E, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|F Chain F, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
Length = 254
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 120 DLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAM 179
DL+N N I A GIG +T+R L + + ++ A++++ P
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT-ALAELKAINPKVNITFH 60
Query: 180 ELNL-CRLKSVKKFAEEYQKKFRSLNILVLNAGVF 213
++ + KK ++ + ++++IL+ AG+
Sbjct: 61 TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL 95
>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Reductase In Complex With Nadph And Pyroquilon
Length = 274
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 143 LALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRLKSVKKFAEEYQKKFRS 202
L G V++ S KA + + L +K AQ +A++ ++ + V ++ F
Sbjct: 41 LGRRGASVVVNYGSSSKAAEEVVAEL-KKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99
Query: 203 LNILVLNAG--VFGLGFSHTEDGFETTFQVNHLAHFYLTLQ 241
L+ ++ N+G V+ T++ F+ F +N F++ Q
Sbjct: 100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQ 140
>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1
Length = 260
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
+VTGA+ GIG A L G V + R LD + + QC+ + + +
Sbjct: 9 VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQE--AQSLGGQCVPVVCDSSQE 66
Query: 187 KSVKKFAEEYQKKFRS-LNILVLNA 210
V+ E+ ++ + L++LV NA
Sbjct: 67 SEVRSLFEQVDREQQGRLDVLVNNA 91
>pdb|1F1S|A Chain A, Crystal Structure Of Streptococcus Agalactiae Hyaluronate
Lyase At 2.1 Angstrom Resolution.
pdb|1I8Q|A Chain A, Crystal Structure Of Streptococcus Agalactiae Hyaluronate
Lyase Complexed With Enzyme Product, Unsaturated
Disaccharide Hyaluronan
pdb|1LXM|A Chain A, Crystal Structure Of Streptococcus Agalactiae Hyaluronate
Lyase Complexed With Hexasaccharide Unit Of Hyaluronan
Length = 814
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
Query: 32 YYVNHATEGT-QWTHPRTGVKKKVSGDLPLGWEKSVSEDGKITFYNKDTHVKTYTDP 87
Y VN EG+ W GV + ++G L L + Y D +KTYTDP
Sbjct: 189 YNVNKDIEGSANWWDFEIGVPRSITGTLSL-----------MNNYFTDAEIKTYTDP 234
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCRL 186
+VTG N GIG A+ LA G +V + R + P +E ++
Sbjct: 19 LVTGGNRGIGLAIAQRLAADGHKVAVTHRG------------SGAPKG-LFGVECDVTDS 65
Query: 187 KSVKKFAEEYQKKFRSLNILVLNAGVFGLGF--SHTEDGFETTFQVNHLAHFYLTLQLEN 244
+V + ++ + +LV NAG+ F TE+ FE N F + +
Sbjct: 66 DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 125
Query: 245 AL 246
++
Sbjct: 126 SM 127
>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|B Chain B, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|C Chain C, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|D Chain D, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
Length = 319
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILA-----CRSLDKANDAISKILTE--KPSAQCIAM 179
+VTGA G+G A + A G V++ + + K + A K++ E + + +A
Sbjct: 13 LVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA- 71
Query: 180 ELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF-GLGFSHTEDGFETTFQVNHL 233
N +++ +K + F ++++V NAG+ FS D Q HL
Sbjct: 72 --NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHL 124
>pdb|2CU9|A Chain A, Crystal Structure Of Histone Chaperone Cia1
pdb|2DZE|A Chain A, Crystal Structure Of Histone Chaperone Asf1 In Complex
With A C-Terminus Of Histone H3
pdb|2DZE|B Chain B, Crystal Structure Of Histone Chaperone Asf1 In Complex
With A C-Terminus Of Histone H3
pdb|2Z34|A Chain A, Crystal Structure Of Spcia1ASF1 COMPLEX WITH HIP1
pdb|2Z34|B Chain B, Crystal Structure Of Spcia1ASF1 COMPLEX WITH HIP1
pdb|2Z3F|A Chain A, Crystal Structure Of Spcia1ASF1 COMPLEXED WITH CAC2
PEPTIDE
pdb|2Z3F|B Chain B, Crystal Structure Of Spcia1ASF1 COMPLEXED WITH CAC2
PEPTIDE
pdb|2Z3F|C Chain C, Crystal Structure Of Spcia1ASF1 COMPLEXED WITH CAC2
PEPTIDE
pdb|2Z3F|D Chain D, Crystal Structure Of Spcia1ASF1 COMPLEXED WITH CAC2
PEPTIDE
pdb|2Z3F|E Chain E, Crystal Structure Of Spcia1ASF1 COMPLEXED WITH CAC2
PEPTIDE
pdb|2Z3F|F Chain F, Crystal Structure Of Spcia1ASF1 COMPLEXED WITH CAC2
PEPTIDE
pdb|2Z3F|G Chain G, Crystal Structure Of Spcia1ASF1 COMPLEXED WITH CAC2
PEPTIDE
pdb|2Z3F|H Chain H, Crystal Structure Of Spcia1ASF1 COMPLEXED WITH CAC2
PEPTIDE
Length = 161
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 32 YYVNHATEGTQWTHPRTGVKKKVSGDLPLGWEKSVSEDGKITFYN 76
YYVN+ EG KKV D+ W ++E ++T +N
Sbjct: 112 YYVNNEMEGLNLQEMDDAEIKKVKVDISKVWRSILAEKPRVTRFN 156
>pdb|2YSC|A Chain A, Solution Structure Of The Ww Domain From The Human
Amyloid Beta A4 Precursor Protein-Binding Family B
Member 3, Apbb3
Length = 39
Score = 28.1 bits (61), Expect = 6.5, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 17 LPPGWEERVTADGCVYYVNHATEG-TQWTHP 46
LPPGW + A G Y+ H G TQW P
Sbjct: 9 LPPGWRKIHDAAGTYYW--HVPSGSTQWQRP 37
>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|B Chain B, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|C Chain C, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|D Chain D, Improved Nadph-Dependent Blue Fluorescent Protein
Length = 266
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 118 GRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCI 177
GR ++TGA++GIG AR + G ++L R +++ P+ C
Sbjct: 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK------ALNLPNTLC- 63
Query: 178 AMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDG--FETTFQVNHL 233
++++ + +K + + +V NAG+ LG T++ ++ F VN L
Sbjct: 64 -AQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120
>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From
Burkholderia Pseudomallei
pdb|3ENK|B Chain B, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From
Burkholderia Pseudomallei
Length = 341
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 127 IVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKI 167
+VTG IG TA L HG V++A ++ +AI++I
Sbjct: 9 LVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARI 49
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 116 LHGRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQ 175
+ GR L+ A+V+G G+G R++ G +V+ LD+ K + + +
Sbjct: 1 MSGR-LTGKVALVSGGARGMGASHVRAMVAEGAKVVFG-DILDEEG----KAMAAELADA 54
Query: 176 CIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG 216
+ L++ + K + F L++LV NAG+ +G
Sbjct: 55 ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG 95
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 126 AIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTEKPSAQCIAMELNLCR 185
A+VTGA+ GIG A L G VI S A + I++ L + + + L++
Sbjct: 30 ALVTGASRGIGQAIALELGRLGAVVIGTATSASGA-EKIAETL-KANGVEGAGLVLDVSS 87
Query: 186 LKSVKKFAEEYQKKFRSLNILVLNAGV 212
+SV E Q+ I+V NAG+
Sbjct: 88 DESVAATLEHIQQHLGQPLIVVNNAGI 114
>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|B Chain B, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|C Chain C, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
Length = 274
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 121 LSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKIL------TEKPSA 174
LS +TGA+ GIG A A G V +A +S AN + +
Sbjct: 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKS-AVANPKLPGTIHSAAAAVNAAGG 62
Query: 175 QCIAMELNLCRLKSVKKFAEEYQKKFRSLNILVLNA 210
Q +A++ ++ V+ F ++ILV NA
Sbjct: 63 QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNA 98
>pdb|4B4T|N Chain N, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
Length = 945
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 118 GRDLSNYNAIVTGANTGIGFETARSLALHGCRVILACRSLDKANDAISKILTE------K 171
GRD ++Y + N+G + + LHG + + ++ AN + + L E
Sbjct: 416 GRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYEALKEVLYNDSA 475
Query: 172 PSAQCIAMELNLCRLKSVK 190
S + A+ + LC L + K
Sbjct: 476 TSGEAAALGMGLCMLGTGK 494
>pdb|2DK1|A Chain A, Solution Structure Of Ww Domain In Ww Domain Binding
Protein 4 (Wbp-4)
Length = 50
Score = 27.7 bits (60), Expect = 9.4, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 21 WEERVTADGCVYYVNHATEGTQWTHPR--TGVKKKVSG 56
W E +T++G YY + + +QW P G KK SG
Sbjct: 9 WVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTSG 46
>pdb|1E0L|A Chain A, Fbp28ww Domain From Mus Musculus
pdb|2JUP|W Chain W, Fbp28ww2 Domain In Complex With The Pplipppp Peptide
pdb|2RLY|W Chain W, Fbp28ww2 Domain In Complex With Ptppplpp Peptide
pdb|2RM0|W Chain W, Fbp28ww2 Domain In Complex With A Ppplipppp Peptide
Length = 37
Score = 27.7 bits (60), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 21 WEERVTADGCVYYVNHATEGTQWTHPR 47
W E TADG YY N+ T + W P+
Sbjct: 8 WTEYKTADGKTYYYNNRTLESTWEKPQ 34
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,668,166
Number of Sequences: 62578
Number of extensions: 381155
Number of successful extensions: 1361
Number of sequences better than 100.0: 316
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 1027
Number of HSP's gapped (non-prelim): 371
length of query: 328
length of database: 14,973,337
effective HSP length: 99
effective length of query: 229
effective length of database: 8,778,115
effective search space: 2010188335
effective search space used: 2010188335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)