BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy425
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis
elegans GN=pcm-1 PE=2 SV=1
Length = 225
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKI 200
AA L +L + L+ GA LD+G GSG+++ CMA MVG G V ++H+PQL+ L ++
Sbjct: 66 AAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRK 125
Query: 201 SYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+ + + ++ ++E D R+ + + PY+ IH G+ K +P
Sbjct: 126 HHSEQLERGNVI-IIEGDGRQGFAEKAPYNAIHVGAASKGVP 166
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
A L+ LSD+L GA LD+G GSG ++ C +RMVG KG V +DHI +L++ + +K
Sbjct: 65 HAYALELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGIDHIKELVDDSINNVK 124
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
P L ++ +V D R Y + PYD IH G+ +P
Sbjct: 125 KDDPTLLSSGRVKLIV-GDGRMGYAEEAPYDAIHVGAAAPVVP 166
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAK-DGYIDSPHNFGTNSIVERPSYVSS 65
S+ + I L++N + ++V E + DR +AK + Y+DSP + G + + P ++ +
Sbjct: 8 ASHSELIHNLRKNGIIKSDKVFEVMLATDRCHYAKYNPYMDSPQSIGFQATISAP-HMHA 66
Query: 66 CSIWYLVICLGKGSKS--IFQTYGIVSGNKGIHFLPFYQFYLISHLREV 112
++ L L +G+K+ + GI++ P Q I H++E+
Sbjct: 67 YALELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGIDHIKEL 115
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
A L+ L D+L GA LD+G GSG ++ C ARMVG+ G V +DHI +L++ +T +K
Sbjct: 65 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGNSGKVIGIDHIKELVDDSITNVK 124
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
P L ++ VV D R Y + PYD IH G+ +P
Sbjct: 125 KDDPMLLSSGRVRLVVG-DGRMGYAEEAPYDAIHVGAAAPVVP 166
Score = 38.1 bits (87), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAK-DGYIDSPHNFGTNSIVERPSYVSS 65
S+ + I L++N + ++V E + DR +AK + Y+DSP + G + + P ++ +
Sbjct: 8 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKSNPYMDSPQSIGFQATISAP-HMHA 66
Query: 66 CSIWYLVICLGKGSKSI 82
++ L L +G+K++
Sbjct: 67 YALELLFDQLHEGAKAL 83
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKI 200
A CLQ L L PG VLD+G G+G+++ C A MVG +G V+HIP+L+ + ++
Sbjct: 71 AMCLQLLEKHLKPGMRVLDVGSGTGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIEA 130
Query: 201 SYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
S + + V D R+ + + PYD IH G+ IP
Sbjct: 131 SAASPFLKEGSLAVHVGDGRQGWAEFAPYDAIHVGAAAPEIP 172
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
A L+ L D+L GA LD+G GSG ++ C ARMVG G V +DHI +L++ +T +K
Sbjct: 65 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNVK 124
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
P L ++ VV D R + + PYD IH G+ +P
Sbjct: 125 KDDPMLLSSGRVRLVVG-DGRMGFAEEAPYDAIHVGAAAPVVP 166
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG-YIDSPHNFGTNSIVERPSYVSS 65
S+ + I L++N + ++V E + DR +AK Y+DSP + G + + P ++ +
Sbjct: 8 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKSNPYMDSPQSIGFQATISAP-HMHA 66
Query: 66 CSIWYLVICLGKGSKSI 82
++ L L +G+K++
Sbjct: 67 YALELLFDQLHEGAKAL 83
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
A L+ L D+L GA LD+G GSG ++ C ARMVG G V +DHI +L++ + ++
Sbjct: 65 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVR 124
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
P L ++ VV D R Y + PYD IH G+ +P
Sbjct: 125 KDDPMLLSSGRVQLVVG-DGRMGYAEEAPYDAIHVGAAAPVVP 166
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAK-DGYIDSPHNFGTNSIVERPSYVSS 65
S+ + I L++N + ++V E + DR +AK + Y+DSP + G + + P ++ +
Sbjct: 8 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNPYMDSPQSIGFQATISAP-HMHA 66
Query: 66 CSIWYLVICLGKGSKS--IFQTYGIVSGNKGIHFLPFYQFYLISHLREV 112
++ L L +G+K+ + GI++ P + I H++E+
Sbjct: 67 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKEL 115
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
A L+ L D L GA LD+G GSG +S C +RMVG G V +DHI +L+ + +K
Sbjct: 65 HAYALELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVK 124
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
P L +I +V D R + + PYD IH G+ +P
Sbjct: 125 KDDPSLITSGRIKLIV-GDGRMGFTEEAPYDAIHVGAAAPTVP 166
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAK-DGYIDSPHNFGTNSIVERPSYVSS 65
S+ + + L++N + +RV E + DR F++ + Y+DSP + G + + P ++ +
Sbjct: 8 ASHAELVNNLRKNGIIKSDRVYEVMLATDRSHFSRCNPYMDSPQSIGYQATISAP-HMHA 66
Query: 66 CSIWYLVICLGKGSKS--IFQTYGIVSGNKGIHFLPFYQFYLISHLREV 112
++ L L +G+K+ + GI+S P + I H++E+
Sbjct: 67 YALELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGIDHIKEL 115
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
A L+ L D+L GA LD+G GSG ++ C ARMVG G V +DHI +L++ + ++
Sbjct: 65 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVR 124
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
P L ++ VV D R Y + PYD IH G+ +P
Sbjct: 125 KDDPTLLSSGRVQLVVG-DGRMGYAEEAPYDAIHVGAAAPVVP 166
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
A L+ L D+L GA LD+G GSG ++ C ARMVG G V +DHI +L++ + ++
Sbjct: 65 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSINNVR 124
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
P L ++ VV D R Y + PYD IH G+ +P
Sbjct: 125 KDDPTLLSSGRVQLVVG-DGRMGYAEEAPYDAIHVGAAAPVVP 166
Score = 37.7 bits (86), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAK-DGYIDSPHNFGTNSIVERPSYVSS 65
S+ + I L++N + ++V E + DR +AK + Y+DSP + G + + P ++ +
Sbjct: 8 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNPYMDSPQSIGFQATISAP-HMHA 66
Query: 66 CSIWYLVICLGKGSKSI 82
++ L L +G+K++
Sbjct: 67 YALELLFDQLHEGAKAL 83
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
A L+ L D+L GA LD+G GSG ++ C ARMVG G V +DHI +L++ + ++
Sbjct: 65 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR 124
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
P L ++ VV D R Y + PYD IH G+ +P
Sbjct: 125 KDDPTLLSSGRVQLVVG-DGRMGYAEEAPYDAIHVGAAAPVVP 166
Score = 37.7 bits (86), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAK-DGYIDSPHNFGTNSIVERPSYVSS 65
S+ + I L++N + ++V E + DR +AK + Y+DSP + G + + P ++ +
Sbjct: 8 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNPYMDSPQSIGFQATISAP-HMHA 66
Query: 66 CSIWYLVICLGKGSKSI 82
++ L L +G+K++
Sbjct: 67 YALELLFDQLHEGAKAL 83
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKI 200
A L+ L D+L GA LD+G GSG ++ C ARMVG G V +DHI +L++ + ++
Sbjct: 66 AYALELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRK 125
Query: 201 SYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
P L ++ VV D R Y PYD IH G+ +P
Sbjct: 126 DDPMLLSSGRVQLVVG-DGRMGYAAEAPYDAIHVGAAAPVVP 166
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAK-DGYIDSPHNFGTNSIVERPSYVSS 65
S+ + I L++N + ++V E + DR +AK + Y+DSP + G + + P ++ +
Sbjct: 8 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNPYMDSPQSIGFQATISAP-HMHA 66
Query: 66 CSIWYLVICLGKGSKS--IFQTYGIVSGNKGIHFLPFYQFYLISHLREV 112
++ L L +G+K+ + GI++ P + I H++E+
Sbjct: 67 YALELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKEL 115
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%)
Query: 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKI 200
A CL+ L D L PG + LD+G GSG+++ C A MVG +G ++HIP+L+ ++
Sbjct: 71 ATCLELLKDYLQPGMHALDVGSGSGYLTACFAMMVGPEGRAVGIEHIPELVVASTENVER 130
Query: 201 SYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
S + D R + PYD IH G+ IP
Sbjct: 131 SAAAALMKDGSLSFHVSDGRLGWPDAAPYDAIHVGAAAPEIP 172
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 6 ITSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG---YIDSPHNFGTNSIVERPSY 62
+ N ++YLK+ + ++V E ++ +DR F +G Y DSP G N+ + P
Sbjct: 10 LEKNNALVEYLKQYGVVRTDKVAEVMETIDRALFVPEGFTPYTDSPMPIGYNATISAPHM 69
Query: 63 VSSC 66
++C
Sbjct: 70 HATC 73
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKG-----HVTAVDHIPQLINLF 194
A L++L D L PGA +LD+G GSG+++ C R + KG + ++H +L+
Sbjct: 65 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRS 124
Query: 195 MTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEV 245
L + +++ +VE D RK Y N PY+ IH G+ P E+
Sbjct: 125 KANLNTDDRSMLDSGQLL-IVEGDGRKGYPPNAPYNAIHVGAAAPDTPTEL 174
>sp|Q9URZ1|PIMT_SCHPO Probable protein-L-isoaspartate O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pcm2 PE=3 SV=1
Length = 230
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKL-- 198
A LQ L L PG + LD+G GSG++ MARMV G V ++HIPQL+ L
Sbjct: 66 ATALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGTVKGIEHIPQLVETSKKNLLK 125
Query: 199 KISYPK-LYKLYKI--MDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254
I++ + L ++YK + + D R ++ +D IH G+ +P ++ +S K
Sbjct: 126 DINHDEVLMEMYKEKRLQINVGDGRMGTSEDEKFDAIHVGASASELPQKLVDQLKSPGK 184
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 SYDITSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAK-DGYIDSPHNFGTNSIVERP 60
S++++SN +Q+L E+ F ++R ++A+ R + Y+DSP + G + P
Sbjct: 4 SFNLSSNAALVQHLVESKFLTNQRAIKAMNATSRSFYCPLSPYMDSPQSIGYGVTISAP 62
>sp|A4G087|PIMT_METM5 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pcm PE=3 SV=1
Length = 212
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 154 GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKL-YKIM 212
G NVL++G GSG+ + ++ +VG+ G VT ++ IP+L + S L +L Y+ +
Sbjct: 77 GQNVLEVGTGSGYHAAVVSEIVGESGKVTTIERIPEL-------FEKSKQVLSELGYENV 129
Query: 213 DVVEWDARKPYKKNGPYDVIHFGSGVKHIPI 243
+VV D K Y +N PYD I+ + ++PI
Sbjct: 130 EVVLGDGTKGYLENAPYDRIYVTASGPNVPI 160
>sp|Q6M116|PIMT_METMP Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain S2 / LL) GN=pcm PE=3 SV=1
Length = 212
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 154 GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKL-YKIM 212
G NVL++G GSG+ + ++++VG+ G VT ++ IP+L + S L +L Y +
Sbjct: 77 GQNVLEVGTGSGYHAAVVSKIVGESGKVTTIERIPEL-------FENSKKTLSELGYNNV 129
Query: 213 DVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+VV D K Y +N PYD I+ + +P
Sbjct: 130 EVVLGDGTKGYLENAPYDRIYVTASGPDVP 159
>sp|A8AAV7|PIMT_IGNH4 Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1
Length = 211
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 134 QVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
Q + P + +L G VL++G GSG+ + MA +VG +GHV ++ IP+L
Sbjct: 56 QTISAPHMVAYMVEAAELRRGDKVLEVGTGSGYHAAVMAELVGPEGHVYTIERIPELAER 115
Query: 194 FMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+LK Y + V+ D K Y PYD I + K +P
Sbjct: 116 ARERLKALG------YNNVTVLVGDGSKGYPPAAPYDKIIVTAAAKRVP 158
>sp|A6VI91|PIMT_METM7 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pcm PE=3 SV=1
Length = 212
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 154 GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKL-YKIM 212
G NVL++G GSG+ + ++ +VG+ G+VT ++ IP+L + S L +L Y+ +
Sbjct: 77 GQNVLEVGTGSGYHAAVVSEIVGESGNVTTIERIPEL-------FEKSKQVLLELGYENV 129
Query: 213 DVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+VV D K Y +N PYD I+ + +P
Sbjct: 130 EVVLGDGTKGYLENSPYDRIYVTASGPDVP 159
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYK 210
L G VL++G G G+ + MA +VG GHV +V+ IP+L+ + L+ + Y+
Sbjct: 68 LREGMKVLEVGGGCGYHAAVMAELVGPSGHVYSVERIPELVEMARRNLERAR------YR 121
Query: 211 IMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+ ++ D Y + PYD I + IP
Sbjct: 122 NVSMILGDGTLGYSEQAPYDRISVAASAPDIP 153
>sp|A9A8I9|PIMT_METM6 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=pcm PE=3 SV=1
Length = 212
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 154 GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKL-YKIM 212
G NVL++G GSG+ + ++++VG+ G VT V+ IP+L + S L +L Y+ +
Sbjct: 77 GQNVLEVGTGSGYQAAVVSKIVGESGKVTTVERIPEL-------FEKSKQVLSELGYENV 129
Query: 213 DVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+ V D Y +N PYD I+ + ++P
Sbjct: 130 EAVLGDGTLGYLENSPYDRIYVTASGPNVP 159
>sp|Q12UV0|PIMT_METBU Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides
burtonii (strain DSM 6242) GN=pcm PE=3 SV=1
Length = 203
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 133 DQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLIN 192
DQ + P + K+ G +L++G GSG+ + MA + G+ G V V+ IP+L++
Sbjct: 46 DQTISAPHMVAIMCDLLKITEGMTILEIGSGSGYNAAVMAELAGENGKVYTVERIPELVD 105
Query: 193 LFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
L L+ + Y + VV D ++ PYD I S +P
Sbjct: 106 LARNNLERAG------YSNVTVVHDDGSCGLPEHAPYDRIAVTSVAPEVP 149
>sp|O27962|PIMT2_ARCFU Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm2 PE=3 SV=1
Length = 219
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYK 210
L G VL++G G G+ + A +VG G V ++++IP+L LK Y
Sbjct: 74 LREGDKVLEVGTGCGYHAAVTAEIVGKSGKVISIEYIPELAERARAILKALG------YD 127
Query: 211 IMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
++V+ D K Y+K PYD I+ + IP
Sbjct: 128 NVEVIVGDGSKGYEKEAPYDKIYVTAAAPDIP 159
>sp|Q8TYL4|PIMT_METKA Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pcm
PE=3 SV=1
Length = 226
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKL-KISYPKLYKLYKI 211
PG VL++G GSG+ + +A +V G V V+ IP+L + L K Y + K
Sbjct: 82 PGHKVLEVGAGSGYHAAVVAELVKPDGRVITVERIPELADFARNNLKKTGYDRFVK---- 137
Query: 212 MDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
V+ D K Y PYD I +G +P
Sbjct: 138 --VLVGDGTKGYPPEAPYDRILVTAGAPDVP 166
>sp|O59534|PIMT_PYRHO Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pcm PE=3 SV=2
Length = 220
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 134 QVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
Q + P + L PG NVL++G GSG+ + +A +V KG V +++ IP+L+
Sbjct: 62 QTISAPHMVAIMLEIADLKPGMNVLEVGTGSGWNAALIAEIV--KGDVYSIERIPELVEF 119
Query: 194 FMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
L+ + K + V+ D K + PYD I +G IP
Sbjct: 120 AKRNLERAG------VKNVHVILGDGSKGFPPKSPYDAIIVTAGAPEIP 162
>sp|A6UR90|PIMT_METVS Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pcm
PE=3 SV=1
Length = 209
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 154 GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMD 213
G NVL++G GSG+ + + ++G G +T ++ + +L N L L Y ++
Sbjct: 77 GQNVLEIGTGSGYHAAVVLEIIGKSGKLTTIERVFELFNSAKENL------LKFGYNNIE 130
Query: 214 VVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
V+ D K + +N PYD I+ + K +P
Sbjct: 131 VIYGDGTKGHIENAPYDRIYLTAAGKKVP 159
>sp|Q9GPS6|PIMT_DICDI Probable protein-L-isoaspartate O-methyltransferase
OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1
Length = 316
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Query: 141 AACLQHLSDKLLPGAN--VLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKL 198
A L L+D++ P +N LD+G GSG+++ C+ ++G G V V+HIP+LI + +
Sbjct: 112 ALMLDLLADRI-PMSNGVALDIGSGSGYVTACLGHLMGCTGRVIGVEHIPELIERSIESI 170
Query: 199 KISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPI 243
K L L +I +V D K +K+ YD+I+ G+ ++ + +
Sbjct: 171 KRLDSTL--LDRIQFLV-GDGIKGWKQ-LKYDIIYLGAAIESLQV 211
>sp|Q8P8H2|UBIG_XANCP 3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=ubiG PE=3 SV=1
Length = 239
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKI 211
LPGA VLD+G G G +S MAR+ VTA+D P+L+ + +L + Y++
Sbjct: 54 LPGARVLDVGCGGGLLSEAMARL---GAQVTAIDLAPELVK--VARLHSLESSVQVDYRV 108
Query: 212 MDVVEWDARKPYKKNGPYDVIHFGSGVKHI--PIEVSKLCRSQKK 254
V + A +P G +D + ++H+ P+ + + C S K
Sbjct: 109 QSVEDLAAEQP----GSFDAVTCMEMLEHVPDPLAIIRACASLLK 149
>sp|B0RS27|UBIG_XANCB 3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas
campestris pv. campestris (strain B100) GN=ubiG PE=3
SV=1
Length = 239
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKI 211
LPGA VLD+G G G +S MAR+ VTA+D P+L+ + +L + Y++
Sbjct: 54 LPGARVLDVGCGGGLLSEAMARL---GAQVTAIDLAPELVK--VARLHSLESSVQVDYRV 108
Query: 212 MDVVEWDARKPYKKNGPYDVIHFGSGVKHI--PIEVSKLCRSQKK 254
V + A +P G +D + ++H+ P+ + + C S K
Sbjct: 109 QSVEDLAAEQP----GSFDAVTCMEMLEHVPDPLAIIRACASLLK 149
>sp|Q4UVL4|UBIG_XANC8 3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=ubiG PE=3
SV=1
Length = 239
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKI 211
LPGA VLD+G G G +S MAR+ VTA+D P+L+ + +L + Y++
Sbjct: 54 LPGARVLDVGCGGGLLSEAMARL---GAQVTAIDLAPELVK--VARLHSLESSVQVDYRV 108
Query: 212 MDVVEWDARKPYKKNGPYDVIHFGSGVKHI--PIEVSKLCRSQKK 254
V + A +P G +D + ++H+ P+ + + C S K
Sbjct: 109 QSVEDLAAEQP----GSFDAVTCMEMLEHVPDPLAIIRACASLLK 149
>sp|Q8TT94|PIMT2_METAC Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm2 PE=3 SV=1
Length = 238
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 134 QVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
Q + P L +L G VL++G GSG+ + MA +VG GH+ +V+ I L+N
Sbjct: 79 QTISTPHTVALMCEILELSEGHKVLEIGTGSGYNAAVMAELVGKTGHIYSVERIEPLVNF 138
Query: 194 FMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
L+ Y + V+ + Y + PYD I IP
Sbjct: 139 ARKNLE------QMGYDNVTVLLENGSMGYPRYAPYDRIAVTCAAPTIP 181
>sp|Q8TT93|PIMT1_METAC Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm1 PE=3 SV=1
Length = 251
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
+L G VL++G GSG+ + M +VG GHV V+ I L++ LK + Y
Sbjct: 111 ELSEGLKVLEIGAGSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKKAG------Y 164
Query: 210 KIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+ + V+ D Y K PYD I IP
Sbjct: 165 ENVTVLLDDGSMGYSKCAPYDRIVVTCAAPDIP 197
>sp|Q87BG5|UBIG_XYLFT 3-demethylubiquinone-9 3-methyltransferase OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiG PE=3 SV=1
Length = 246
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 144 LQHLSDKL-LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLF-MTKLKIS 201
L ++S ++ L GA VLD+G G G +S +AR HVTA+D +P+LI + + L+
Sbjct: 45 LDYISKRVSLSGARVLDVGCGGGLLSEALAR---QGAHVTAIDLVPELIKVARLHGLESG 101
Query: 202 YPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
Y++ I D++ A +P P+D I ++H+P
Sbjct: 102 IQVDYRIQAIEDLL---AEQP----APFDAIACMEMLEHVP 135
>sp|B2I705|UBIG_XYLF2 3-demethylubiquinone-9 3-methyltransferase OS=Xylella fastidiosa
(strain M23) GN=ubiG PE=3 SV=1
Length = 246
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 144 LQHLSDKL-LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLF-MTKLKIS 201
L ++S ++ L GA VLD+G G G +S +AR HVTA+D +P+LI + + L+
Sbjct: 45 LDYISKRVSLSGARVLDVGCGGGLLSEALAR---QGAHVTAIDLVPELIKVARLHGLESG 101
Query: 202 YPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
Y++ I D++ A +P P+D I ++H+P
Sbjct: 102 IQVDYRIQAIEDLL---AEQP----APFDAIACMEMLEHVP 135
>sp|A3DMG3|PIMT_STAMF Protein-L-isoaspartate O-methyltransferase OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pcm PE=3
SV=1
Length = 225
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 153 PGANVLDLGFGSGFMSCCMARMVGD-----KGHVTAVDHIPQLINLFMTKLKISYPKLYK 207
PG VL++G GSG+ + +A +V +GHV V+ IP+L L+ +
Sbjct: 79 PGNIVLEIGTGSGYQAAVLAEIVAKQDPNRRGHVYTVERIPELAEFAKKNLERT-----G 133
Query: 208 LYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCR 250
+ + V+ D K Y + PYD I + +P + K R
Sbjct: 134 YIEYVTVIVGDGTKGYPEKAPYDRIIVTAAAPEVPKPLLKQLR 176
>sp|Q3BSF8|UBIG_XANC5 3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas
campestris pv. vesicatoria (strain 85-10) GN=ubiG PE=3
SV=1
Length = 239
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 144 LQHLSDKL-LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISY 202
L+++S +L L GA VLD+G G G +S MAR+ VTA+D P+L+ + +L
Sbjct: 45 LEYVSTRLELAGARVLDVGCGGGLLSESMARL---GAQVTAIDLAPELVK--VARLHSLE 99
Query: 203 PKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+ Y++ V + A +P G +D + ++H+P
Sbjct: 100 SGVQVDYRVQSVEDLAAEQP----GSFDTVTCMEMLEHVP 135
>sp|Q8TZR3|PIMT_PYRFU Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pcm
PE=1 SV=2
Length = 219
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 134 QVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
Q + P + L PG N+L++G GSG+ + ++ +V K V ++ IP+L+
Sbjct: 62 QTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEF 119
Query: 194 FMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
L+ + K + V+ D K + PYDVI +G IP
Sbjct: 120 AKRNLERAG------VKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIP 162
>sp|Q8PW90|PIMT_METMA Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pcm PE=3 SV=1
Length = 243
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 134 QVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
Q + P + +L G VL++G GSG+ + M+ +VG GH+ V+ + L N
Sbjct: 84 QTISAPHMVAMMCEILELAEGHKVLEIGAGSGYNAAVMSELVGKTGHIYTVERVEPLANF 143
Query: 194 FMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
LK + YK + V+ + Y PYD I +IP
Sbjct: 144 AKKNLKEAG------YKNVTVLLENGSMGYPGYAPYDRIAVTCAAPNIP 186
>sp|Q9PAM5|UBIG_XYLFA 3-demethylubiquinone-9 3-methyltransferase OS=Xylella fastidiosa
(strain 9a5c) GN=ubiG PE=3 SV=1
Length = 246
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 144 LQHLSDKL-LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLF-MTKLKIS 201
L ++S ++ L GA VLD+G G G +S +AR HVTA+D P+LI + + L+
Sbjct: 45 LDYISKRVPLSGARVLDVGCGGGLLSEALARQ---GAHVTAIDLAPELIKVARLHGLESG 101
Query: 202 YPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
Y++ I D++ A +P P+D I ++H+P
Sbjct: 102 IQVDYRIQAIEDLL---AEQP----APFDAIACMEMLEHVP 135
>sp|Q9HKE4|CBIT_THEAC Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=cbiT PE=3 SV=1
Length = 202
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 126 HSLSGRPDQVLRRPQAACLQH-------LSD-KLLPGANVLDLGFGSGFMSCCMARMVGD 177
+ + G PD+ +R + + LSD ++ PG V+D+G GSG M+ ++ ++G+
Sbjct: 10 YEVRGIPDEFFQRSEGIPMTKREIRIISLSDLRIRPGMRVMDIGCGSGSMTVEISNIIGE 69
Query: 178 KGHVTAVDHIPQLINLFMTKLK-ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGS 236
G VT +D + +L M + + Y++ I DV ++D+ + +D + G
Sbjct: 70 NGSVTGLDVSGEAADLTMRNCRNLCRFSNYRIV-ISDVYKYDSDE------EFDAVFVGG 122
Query: 237 GVKHI 241
G I
Sbjct: 123 GTARI 127
>sp|A7HL14|PIMT_FERNB Protein-L-isoaspartate O-methyltransferase OS=Fervidobacterium
nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pcm
PE=3 SV=1
Length = 199
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 134 QVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
Q + P + +L G VL++G GSG+ + M+ +VG+ G + ++ IP+L+
Sbjct: 48 QTISAPHMVGMMCEYLELKDGDRVLEIGTGSGYNAAVMSLLVGESGWIYTIERIPELVQE 107
Query: 194 FMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
++ L + I +V D ++ ++ P+D I KHIP
Sbjct: 108 AQKRI-----NLLGINNITIIV-GDGKEGLEEYAPFDKITVTCYAKHIP 150
>sp|Q5GZB5|UBIG_XANOR 3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain KACC10331 / KXO85) GN=ubiG PE=3 SV=1
Length = 239
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 144 LQHLSDKL-LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLF-MTKLKIS 201
L ++S +L L GA VLD+G G G +S MAR+ VTA+D P+L+ + + L+ S
Sbjct: 45 LDYVSARLDLAGARVLDVGCGGGLLSESMARL---GAQVTAIDLAPELVKVARLHGLESS 101
Query: 202 YPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
Y++ + D+ ++ G +D + ++H+P
Sbjct: 102 VQVDYRVQSVEDLAA-------EQTGSFDAVTCMEMLEHVP 135
>sp|B2SHS9|UBIG_XANOP 3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain PXO99A) GN=ubiG PE=3 SV=1
Length = 239
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 144 LQHLSDKL-LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLF-MTKLKIS 201
L ++S +L L GA VLD+G G G +S MAR+ VTA+D P+L+ + + L+ S
Sbjct: 45 LDYVSARLDLAGARVLDVGCGGGLLSESMARL---GAQVTAIDLAPELVKVARLHGLESS 101
Query: 202 YPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
Y++ + D+ ++ G +D + ++H+P
Sbjct: 102 VQVDYRVQSVEDLAA-------EQTGSFDAVTCMEMLEHVP 135
>sp|Q2P2C4|UBIG_XANOM 3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain MAFF 311018) GN=ubiG PE=3 SV=1
Length = 239
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 144 LQHLSDKL-LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLF-MTKLKIS 201
L ++S +L L GA VLD+G G G +S MAR+ VTA+D P+L+ + + L+ S
Sbjct: 45 LDYVSARLDLAGARVLDVGCGGGLLSESMARL---GAQVTAIDLAPELVKVARLHGLESS 101
Query: 202 YPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
Y++ + D+ ++ G +D + ++H+P
Sbjct: 102 VQVDYRVQSVEDLAA-------EQTGSFDAVTCMEMLEHVP 135
>sp|B0U3W1|UBIG_XYLFM 3-demethylubiquinone-9 3-methyltransferase OS=Xylella fastidiosa
(strain M12) GN=ubiG PE=3 SV=1
Length = 246
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 144 LQHLSDKL-LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISY 202
L ++S ++ L GA VLD+G G G +S +AR HVTA+D P+LI +L
Sbjct: 45 LDYISKRVSLSGARVLDVGCGGGLLSEALAR---QGAHVTAIDLAPELIK--AARLHGLE 99
Query: 203 PKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+ Y+I + + A +P P+D I ++H+P
Sbjct: 100 SGIQVDYRIQAIEDLLAEQP----APFDAIACMEMLEHVP 135
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Query: 134 QVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDK-------GHVTAVDH 186
Q + P + L PG VL++G GSG+ + MA +V GHV ++
Sbjct: 66 QTISAPHMVAMMTEYADLKPGMKVLEVGAGSGYHAAVMAEVVAPSDEPREHWGHVYTIER 125
Query: 187 IPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
IP+L L+ + + V+ D + Y + PYD I + IP
Sbjct: 126 IPELAEFARRNLERA-----GYADRVTVIVGDGSRGYPEKAPYDRIIVTAAAPDIP 176
>sp|Q8PK00|UBIG_XANAC 3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=ubiG PE=3 SV=1
Length = 239
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 144 LQHLSDKLLP-GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLF-MTKLKIS 201
L+++S +L P GA VLD+G G G +S MAR+ VTA+D P+L+ + + L+
Sbjct: 45 LEYVSARLEPAGARVLDVGCGGGLLSESMARL---GAQVTAIDLAPELVKVARLHSLESG 101
Query: 202 YPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
Y++ + D+ ++ G +D + ++H+P
Sbjct: 102 VQVDYRVQSVEDLAA-------EQAGSFDAVTCMEMLEHVP 135
>sp|O30199|PIMT1_ARCFU Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm1 PE=3 SV=1
Length = 216
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 134 QVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
Q + P + L G VL++G G G+ + A +VG +G V +V+ IP+L +
Sbjct: 57 QTISAPHMVAIMCELLDLREGERVLEIGTGCGYHAAVTAEIVGKRGLVVSVERIPELAEI 116
Query: 194 FMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
L Y+ + V+ D Y+ PYD I+ + IP
Sbjct: 117 AKRNLSALG------YENVVVIVGDGSLGYEPMAPYDKIYVTASAPDIP 159
>sp|Q9YDA1|PIMT_AERPE Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=pcm PE=3 SV=2
Length = 260
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
PG VLD+G GSG+ S +A +V G V AV+ IP+L L+
Sbjct: 108 PGEKVLDVGAGSGYQSALLAELVTPGGRVYAVERIPELAEYARENLE 154
>sp|Q9UXX0|PIMT_PYRAB Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=pcm PE=3 SV=2
Length = 216
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 134 QVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
Q + P + KL G NVL++G GSG+ + ++ +V K V +++ IP+L+
Sbjct: 58 QTVSAPHMVAIMLEIAKLKEGMNVLEVGTGSGWNAALISYIV--KTDVYSIERIPELVEF 115
Query: 194 FMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
L+ + K + V+ D K + PYDVI +G +P
Sbjct: 116 AKRNLERAG------VKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKVP 158
>sp|B5FAF3|PIMT_VIBFM Protein-L-isoaspartate O-methyltransferase OS=Vibrio fischeri
(strain MJ11) GN=pcm PE=3 SV=1
Length = 208
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
+L P +NVL++G GSG+ + +A++V HV +++ I L+ + +L K
Sbjct: 72 ELTPTSNVLEVGTGSGYQTAVLAKLV---EHVNSIERI--------KSLQWNAKRLLKQL 120
Query: 210 KIMDVVE--WDARKPYKKNGPYDVIHFGSGVKHIP 242
I +V D K ++ GP+D I + + IP
Sbjct: 121 DIYNVSTKHGDGWKGWESKGPFDAIIVTAAAESIP 155
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,838,654
Number of Sequences: 539616
Number of extensions: 4491038
Number of successful extensions: 10356
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 10025
Number of HSP's gapped (non-prelim): 495
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)