Query psy425
Match_columns 254
No_of_seqs 324 out of 2779
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 20:37:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy425.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/425hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r18_A Protein-L-isoaspartate( 99.9 3E-23 1E-27 172.2 15.9 171 2-250 9-185 (227)
2 2pbf_A Protein-L-isoaspartate 99.9 1.3E-22 4.3E-27 168.1 17.3 170 3-250 6-184 (227)
3 1i1n_A Protein-L-isoaspartate 99.9 1.7E-21 5.8E-26 161.2 18.1 171 2-250 2-173 (226)
4 3lbf_A Protein-L-isoaspartate 99.9 1.7E-21 5.8E-26 159.3 15.4 154 8-250 7-165 (210)
5 2yxe_A Protein-L-isoaspartate 99.9 8.3E-21 2.8E-25 155.8 16.8 156 8-249 6-167 (215)
6 1jg1_A PIMT;, protein-L-isoasp 99.9 2.2E-20 7.4E-25 155.8 16.8 156 8-250 20-180 (235)
7 1dl5_A Protein-L-isoaspartate 99.8 7.8E-20 2.7E-24 159.2 17.1 158 9-250 2-166 (317)
8 1vbf_A 231AA long hypothetical 99.8 9E-19 3.1E-23 145.1 12.7 97 140-249 59-155 (231)
9 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.8E-15 6.2E-20 128.2 13.5 103 145-254 62-170 (261)
10 3e05_A Precorrin-6Y C5,15-meth 99.6 9.4E-15 3.2E-19 118.6 15.8 106 140-254 29-134 (204)
11 1nkv_A Hypothetical protein YJ 99.6 4.5E-14 1.5E-18 118.3 14.1 105 140-254 25-132 (256)
12 3njr_A Precorrin-6Y methylase; 99.6 9E-14 3.1E-18 113.3 15.1 102 140-254 44-146 (204)
13 1pjz_A Thiopurine S-methyltran 99.6 1.2E-14 4E-19 118.5 9.8 108 141-254 12-132 (203)
14 3dh0_A SAM dependent methyltra 99.6 5.1E-14 1.7E-18 115.2 13.6 106 140-253 26-134 (219)
15 3jwh_A HEN1; methyltransferase 99.6 3.7E-14 1.3E-18 116.1 12.8 111 140-254 18-133 (217)
16 3jwg_A HEN1, methyltransferase 99.5 6.4E-14 2.2E-18 114.8 12.6 111 140-254 18-133 (219)
17 3hem_A Cyclopropane-fatty-acyl 99.5 8.5E-14 2.9E-18 119.8 13.6 103 140-254 61-175 (302)
18 1vl5_A Unknown conserved prote 99.5 6.8E-14 2.3E-18 117.7 12.2 104 140-254 26-132 (260)
19 3bus_A REBM, methyltransferase 99.5 1.3E-13 4.5E-18 116.6 13.4 105 140-253 50-157 (273)
20 3f4k_A Putative methyltransfer 99.5 1.3E-13 4.4E-18 115.5 12.9 106 140-253 34-141 (257)
21 1xxl_A YCGJ protein; structura 99.5 8.1E-14 2.8E-18 116.0 11.5 104 140-254 10-116 (239)
22 3mti_A RRNA methylase; SAM-dep 99.5 1.3E-13 4.3E-18 110.1 11.9 87 141-236 10-97 (185)
23 3eey_A Putative rRNA methylase 99.5 9.8E-14 3.3E-18 111.8 11.2 84 150-238 19-103 (197)
24 3fpf_A Mtnas, putative unchara 99.5 2.1E-13 7.2E-18 116.8 13.6 95 150-254 119-214 (298)
25 3dlc_A Putative S-adenosyl-L-m 99.5 1.7E-13 5.8E-18 111.5 12.4 104 140-253 33-139 (219)
26 4hg2_A Methyltransferase type 99.5 3E-14 1E-18 120.4 8.1 96 144-254 30-127 (257)
27 3kkz_A Uncharacterized protein 99.5 1.9E-13 6.4E-18 115.5 12.8 106 140-253 34-141 (267)
28 4df3_A Fibrillarin-like rRNA/T 99.5 1.3E-13 4.4E-18 114.5 11.3 97 150-254 74-174 (233)
29 3dr5_A Putative O-methyltransf 99.5 6E-14 2.1E-18 115.9 9.1 110 140-254 41-155 (221)
30 3bkx_A SAM-dependent methyltra 99.5 1.8E-13 6.2E-18 115.8 11.9 108 140-254 32-150 (275)
31 3vc1_A Geranyl diphosphate 2-C 99.5 2.7E-13 9.1E-18 117.3 13.1 96 151-253 115-212 (312)
32 3id6_C Fibrillarin-like rRNA/T 99.5 4.3E-13 1.5E-17 111.4 13.3 107 140-254 62-173 (232)
33 3ofk_A Nodulation protein S; N 99.5 1.2E-13 3.9E-18 112.9 9.0 92 150-253 48-145 (216)
34 3r3h_A O-methyltransferase, SA 99.5 5.7E-14 2E-18 117.6 7.2 100 150-254 57-162 (242)
35 3ujc_A Phosphoethanolamine N-m 99.5 1.8E-13 6.3E-18 114.8 10.4 102 140-253 44-150 (266)
36 3tfw_A Putative O-methyltransf 99.5 2.9E-13 9.9E-18 113.5 11.5 109 140-254 51-162 (248)
37 1kpg_A CFA synthase;, cyclopro 99.5 5.1E-13 1.7E-17 113.9 13.0 102 141-254 54-160 (287)
38 2o57_A Putative sarcosine dime 99.5 6.7E-13 2.3E-17 113.7 13.6 98 150-254 79-179 (297)
39 3ntv_A MW1564 protein; rossman 99.5 2.4E-13 8.1E-18 112.9 10.3 99 150-254 68-168 (232)
40 2gb4_A Thiopurine S-methyltran 99.5 2.1E-13 7.1E-18 114.9 10.0 100 151-254 66-183 (252)
41 3duw_A OMT, O-methyltransferas 99.5 1.4E-13 4.8E-18 113.1 8.8 109 140-254 46-159 (223)
42 3mgg_A Methyltransferase; NYSG 99.5 3.1E-13 1.1E-17 114.5 11.0 97 150-253 34-133 (276)
43 3lec_A NADB-rossmann superfami 99.5 2.2E-13 7.5E-18 112.8 9.8 86 147-238 15-100 (230)
44 2hnk_A SAM-dependent O-methylt 99.5 3.4E-13 1.2E-17 112.3 10.9 100 150-254 57-173 (239)
45 3kr9_A SAM-dependent methyltra 99.5 2.2E-13 7.4E-18 112.6 9.6 85 147-237 9-93 (225)
46 3dtn_A Putative methyltransfer 99.5 5E-13 1.7E-17 110.5 11.5 93 151-253 42-139 (234)
47 1nt2_A Fibrillarin-like PRE-rR 99.5 7.4E-13 2.5E-17 108.5 12.4 96 150-254 54-153 (210)
48 3p9n_A Possible methyltransfer 99.4 4E-13 1.4E-17 107.8 10.5 94 140-241 30-126 (189)
49 3u81_A Catechol O-methyltransf 99.4 2.8E-13 9.5E-18 111.5 9.7 108 141-254 47-162 (221)
50 3hm2_A Precorrin-6Y C5,15-meth 99.4 8.1E-13 2.8E-17 104.3 12.0 104 140-254 14-119 (178)
51 3gnl_A Uncharacterized protein 99.4 2.8E-13 9.6E-18 113.0 9.6 85 147-237 15-99 (244)
52 3htx_A HEN1; HEN1, small RNA m 99.4 9E-13 3.1E-17 125.5 14.1 112 140-254 710-827 (950)
53 2yqz_A Hypothetical protein TT 99.4 6E-13 2E-17 111.6 11.5 105 140-254 23-133 (263)
54 3grz_A L11 mtase, ribosomal pr 99.4 4E-13 1.4E-17 108.9 10.0 104 140-253 47-150 (205)
55 3hnr_A Probable methyltransfer 99.4 5.5E-13 1.9E-17 109.1 10.6 99 140-254 34-137 (220)
56 1l3i_A Precorrin-6Y methyltran 99.4 6.4E-13 2.2E-17 105.8 10.6 105 140-254 22-126 (192)
57 3ou2_A SAM-dependent methyltra 99.4 9.2E-13 3.1E-17 107.3 11.7 90 140-244 34-123 (218)
58 2fk8_A Methoxy mycolic acid sy 99.4 1.2E-12 4E-17 113.4 12.9 102 141-254 80-186 (318)
59 3tr6_A O-methyltransferase; ce 99.4 2.3E-13 8E-18 111.8 8.0 108 141-254 53-166 (225)
60 2xvm_A Tellurite resistance pr 99.4 1.2E-12 4E-17 105.1 11.9 90 141-242 22-111 (199)
61 2b25_A Hypothetical protein; s 99.4 6.4E-13 2.2E-17 116.2 11.1 109 140-253 94-210 (336)
62 3g5t_A Trans-aconitate 3-methy 99.4 1.4E-12 4.7E-17 112.1 13.0 98 151-253 34-140 (299)
63 1ve3_A Hypothetical protein PH 99.4 2E-12 6.7E-17 106.1 13.4 104 140-253 25-133 (227)
64 1sui_A Caffeoyl-COA O-methyltr 99.4 4.5E-13 1.5E-17 112.4 9.6 109 140-254 67-182 (247)
65 3gu3_A Methyltransferase; alph 99.4 8.7E-13 3E-17 112.6 11.4 106 140-254 10-118 (284)
66 2p7i_A Hypothetical protein; p 99.4 3.9E-13 1.3E-17 111.5 9.0 99 140-253 30-132 (250)
67 3mb5_A SAM-dependent methyltra 99.4 2.1E-12 7.2E-17 108.2 13.2 105 140-254 82-186 (255)
68 2p8j_A S-adenosylmethionine-de 99.4 2.4E-12 8.4E-17 104.2 12.7 93 140-242 11-103 (209)
69 3ocj_A Putative exported prote 99.4 3.5E-13 1.2E-17 116.2 7.9 100 148-253 113-218 (305)
70 2pxx_A Uncharacterized protein 99.4 1E-12 3.6E-17 106.6 10.2 92 140-241 29-120 (215)
71 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.4E-12 4.8E-17 108.9 10.9 90 142-243 84-173 (254)
72 1i9g_A Hypothetical protein RV 99.4 3.9E-12 1.3E-16 108.0 13.8 106 140-253 88-194 (280)
73 1zx0_A Guanidinoacetate N-meth 99.4 4E-13 1.4E-17 111.5 7.5 95 151-254 58-162 (236)
74 1yzh_A TRNA (guanine-N(7)-)-me 99.4 4.6E-12 1.6E-16 103.5 13.7 96 152-254 40-148 (214)
75 4fsd_A Arsenic methyltransfera 99.4 1.8E-12 6E-17 115.5 12.0 103 151-254 81-195 (383)
76 3l8d_A Methyltransferase; stru 99.4 1.3E-12 4.5E-17 108.2 10.2 99 143-253 43-144 (242)
77 2gpy_A O-methyltransferase; st 99.4 9.2E-13 3.1E-17 109.1 9.2 107 140-254 43-152 (233)
78 4htf_A S-adenosylmethionine-de 99.4 1.4E-12 4.9E-17 111.1 10.7 93 153-253 68-164 (285)
79 1xdz_A Methyltransferase GIDB; 99.4 9E-13 3.1E-17 109.8 9.1 95 152-254 69-166 (240)
80 2p35_A Trans-aconitate 2-methy 99.4 2.2E-12 7.4E-17 108.0 11.5 99 140-253 22-123 (259)
81 2frn_A Hypothetical protein PH 99.4 2.7E-12 9.3E-17 109.5 12.1 96 150-254 122-217 (278)
82 3ggd_A SAM-dependent methyltra 99.4 1.4E-12 4.8E-17 108.5 10.1 102 141-254 44-155 (245)
83 2ex4_A Adrenal gland protein A 99.4 1.2E-12 4.2E-17 108.8 9.7 83 153-243 79-161 (241)
84 3orh_A Guanidinoacetate N-meth 99.4 5.8E-13 2E-17 110.9 7.6 95 151-254 58-162 (236)
85 2pwy_A TRNA (adenine-N(1)-)-me 99.4 5.6E-12 1.9E-16 105.5 13.7 104 140-253 85-189 (258)
86 1dus_A MJ0882; hypothetical pr 99.4 5.9E-12 2E-16 100.3 13.2 90 140-241 41-132 (194)
87 3uwp_A Histone-lysine N-methyl 99.4 1.8E-12 6E-17 115.4 11.0 108 140-254 162-280 (438)
88 3sm3_A SAM-dependent methyltra 99.4 2.1E-12 7.3E-17 106.2 10.8 100 150-253 27-132 (235)
89 3g89_A Ribosomal RNA small sub 99.4 1.4E-12 4.8E-17 109.6 9.8 94 152-253 79-175 (249)
90 3pfg_A N-methyltransferase; N, 99.4 2.1E-12 7.2E-17 108.7 10.9 88 140-242 37-125 (263)
91 3m70_A Tellurite resistance pr 99.4 2.6E-12 9E-17 109.4 11.5 90 141-243 110-199 (286)
92 3c3y_A Pfomt, O-methyltransfer 99.4 1.4E-12 4.9E-17 108.6 9.4 109 140-254 58-173 (237)
93 3cbg_A O-methyltransferase; cy 99.4 2.3E-12 7.9E-17 106.9 10.6 99 151-254 70-174 (232)
94 3iv6_A Putative Zn-dependent a 99.4 1.6E-12 5.3E-17 109.9 9.7 90 140-243 34-125 (261)
95 2yxd_A Probable cobalt-precorr 99.4 4.7E-12 1.6E-16 100.0 11.9 96 140-249 24-119 (183)
96 3c3p_A Methyltransferase; NP_9 99.4 1.1E-12 3.8E-17 106.9 8.4 107 141-254 45-152 (210)
97 1g8a_A Fibrillarin-like PRE-rR 99.4 3.3E-12 1.1E-16 105.2 11.2 96 151-254 71-170 (227)
98 3g07_A 7SK snRNA methylphospha 99.4 1.1E-12 3.7E-17 112.6 8.7 90 150-241 43-190 (292)
99 3gru_A Dimethyladenosine trans 99.4 4.2E-12 1.4E-16 109.1 12.2 97 140-249 39-135 (295)
100 3g5l_A Putative S-adenosylmeth 99.4 2.3E-12 7.7E-17 107.8 10.3 92 151-253 42-136 (253)
101 3fzg_A 16S rRNA methylase; met 99.4 7.2E-13 2.5E-17 106.0 6.8 104 141-253 37-143 (200)
102 1u2z_A Histone-lysine N-methyl 99.4 4.3E-12 1.5E-16 114.3 12.7 108 140-254 231-351 (433)
103 3e23_A Uncharacterized protein 99.4 2.7E-12 9.2E-17 104.4 10.1 89 149-253 39-132 (211)
104 2fca_A TRNA (guanine-N(7)-)-me 99.4 5.5E-12 1.9E-16 103.3 11.6 96 152-254 37-145 (213)
105 1jsx_A Glucose-inhibited divis 99.4 5.7E-12 1.9E-16 102.1 11.5 105 140-253 51-156 (207)
106 3lpm_A Putative methyltransfer 99.4 4.6E-12 1.6E-16 106.8 11.1 82 150-238 45-129 (259)
107 3lcc_A Putative methyl chlorid 99.3 2E-12 6.7E-17 107.1 8.7 92 153-253 66-162 (235)
108 2ift_A Putative methylase HI07 99.3 1.6E-12 5.5E-17 105.6 7.9 91 140-239 41-136 (201)
109 2fhp_A Methylase, putative; al 99.3 3.8E-12 1.3E-16 101.2 9.9 92 140-239 32-127 (187)
110 1yb2_A Hypothetical protein TA 99.3 5E-12 1.7E-16 107.5 11.2 103 140-253 99-202 (275)
111 3ege_A Putative methyltransfer 99.3 2.2E-12 7.4E-17 108.8 8.8 97 140-253 23-122 (261)
112 3a27_A TYW2, uncharacterized p 99.3 1E-11 3.5E-16 105.6 13.0 96 150-254 116-211 (272)
113 1ixk_A Methyltransferase; open 99.3 8.1E-12 2.8E-16 108.5 12.6 88 141-236 108-195 (315)
114 3thr_A Glycine N-methyltransfe 99.3 1.7E-12 5.8E-17 110.9 8.2 108 140-254 46-167 (293)
115 1fbn_A MJ fibrillarin homologu 99.3 6.3E-12 2.2E-16 104.0 11.4 95 150-254 71-170 (230)
116 2avd_A Catechol-O-methyltransf 99.3 2.2E-12 7.7E-17 106.2 8.6 107 142-254 59-171 (229)
117 2esr_A Methyltransferase; stru 99.3 2.1E-12 7.3E-17 102.1 8.1 91 140-238 19-110 (177)
118 2bm8_A Cephalosporin hydroxyla 99.3 1.8E-12 6.1E-17 108.0 7.9 92 152-254 80-179 (236)
119 3d2l_A SAM-dependent methyltra 99.3 8.5E-12 2.9E-16 103.3 11.9 87 143-241 23-110 (243)
120 3bkw_A MLL3908 protein, S-aden 99.3 5.5E-12 1.9E-16 104.4 10.8 100 141-253 33-135 (243)
121 1y8c_A S-adenosylmethionine-de 99.3 6.8E-12 2.3E-16 103.9 11.3 91 140-241 24-115 (246)
122 2fpo_A Methylase YHHF; structu 99.3 3.7E-12 1.3E-16 103.5 9.5 91 140-239 42-133 (202)
123 3gdh_A Trimethylguanosine synt 99.3 6.8E-13 2.3E-17 110.3 5.2 93 141-243 67-159 (241)
124 3ccf_A Cyclopropane-fatty-acyl 99.3 1E-11 3.5E-16 105.5 12.4 98 140-254 46-146 (279)
125 3h2b_A SAM-dependent methyltra 99.3 4.6E-12 1.6E-16 102.3 9.6 86 154-253 42-132 (203)
126 3evz_A Methyltransferase; NYSG 99.3 2.1E-11 7.2E-16 100.4 13.8 81 150-240 52-135 (230)
127 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.1E-11 3.6E-16 102.7 11.9 97 150-254 74-174 (233)
128 3dxy_A TRNA (guanine-N(7)-)-me 99.3 5.1E-12 1.7E-16 104.1 9.8 80 152-238 33-115 (218)
129 1ws6_A Methyltransferase; stru 99.3 4.1E-12 1.4E-16 99.5 8.9 104 140-253 28-138 (171)
130 1ri5_A MRNA capping enzyme; me 99.3 1.4E-11 5E-16 105.0 12.9 84 150-240 61-145 (298)
131 4azs_A Methyltransferase WBDD; 99.3 1.6E-12 5.5E-17 121.5 7.3 91 145-244 58-150 (569)
132 2nxc_A L11 mtase, ribosomal pr 99.3 3.8E-12 1.3E-16 107.2 8.7 104 140-254 107-210 (254)
133 2b3t_A Protein methyltransfera 99.3 1.9E-11 6.4E-16 103.9 13.0 79 152-238 108-186 (276)
134 1nv8_A HEMK protein; class I a 99.3 1.8E-11 6.1E-16 104.8 12.9 86 140-236 112-200 (284)
135 3bxo_A N,N-dimethyltransferase 99.3 1.6E-11 5.4E-16 101.4 12.1 88 140-242 27-115 (239)
136 1o54_A SAM-dependent O-methylt 99.3 1.6E-11 5.6E-16 104.3 12.4 104 140-253 101-204 (277)
137 3dmg_A Probable ribosomal RNA 99.3 1.4E-11 4.8E-16 109.7 12.2 91 140-240 216-310 (381)
138 4dcm_A Ribosomal RNA large sub 99.3 1.8E-11 6.1E-16 108.8 12.4 94 140-240 211-304 (375)
139 2fyt_A Protein arginine N-meth 99.3 2.6E-11 8.7E-16 106.4 13.1 79 150-236 61-139 (340)
140 3k6r_A Putative transferase PH 99.3 1.5E-11 5.2E-16 104.7 11.1 95 150-253 122-216 (278)
141 2ozv_A Hypothetical protein AT 99.3 1.3E-11 4.3E-16 104.3 10.1 83 150-238 33-125 (260)
142 2kw5_A SLR1183 protein; struct 99.3 1.8E-11 6.3E-16 98.7 10.3 77 150-237 27-103 (202)
143 2yvl_A TRMI protein, hypotheti 99.3 7.2E-11 2.5E-15 98.1 14.2 103 140-254 80-182 (248)
144 3i9f_A Putative type 11 methyl 99.3 8.4E-12 2.9E-16 97.9 8.0 93 142-253 8-103 (170)
145 2h1r_A Dimethyladenosine trans 99.3 1.7E-11 5.8E-16 105.7 10.5 97 140-249 31-127 (299)
146 3mq2_A 16S rRNA methyltransfer 99.3 8.5E-12 2.9E-16 102.0 8.3 109 140-254 16-132 (218)
147 1zq9_A Probable dimethyladenos 99.3 2.8E-11 9.5E-16 103.6 11.8 98 140-249 17-114 (285)
148 3q7e_A Protein arginine N-meth 99.3 2.2E-11 7.4E-16 107.2 11.3 97 150-254 63-165 (349)
149 3tma_A Methyltransferase; thum 99.3 4.8E-11 1.6E-15 105.0 13.6 91 140-238 192-282 (354)
150 3bgv_A MRNA CAP guanine-N7 met 99.3 4E-11 1.4E-15 103.6 12.7 99 140-241 21-127 (313)
151 2h00_A Methyltransferase 10 do 99.3 5.9E-11 2E-15 99.4 13.4 83 153-241 65-153 (254)
152 3g2m_A PCZA361.24; SAM-depende 99.3 1.8E-11 6.3E-16 105.0 10.5 93 140-242 72-165 (299)
153 2gs9_A Hypothetical protein TT 99.3 2.3E-11 8E-16 98.7 10.6 87 151-253 34-123 (211)
154 1wzn_A SAM-dependent methyltra 99.3 4.9E-11 1.7E-15 99.5 12.5 75 151-236 39-113 (252)
155 3dli_A Methyltransferase; PSI- 99.3 1.3E-11 4.5E-16 102.4 8.9 88 150-254 38-132 (240)
156 1uwv_A 23S rRNA (uracil-5-)-me 99.3 6.5E-11 2.2E-15 107.1 14.1 102 140-253 275-380 (433)
157 2y1w_A Histone-arginine methyl 99.3 4.5E-11 1.5E-15 105.1 12.7 103 140-253 39-146 (348)
158 3r0q_C Probable protein argini 99.3 3E-11 1E-15 107.3 11.7 96 150-254 60-161 (376)
159 3m33_A Uncharacterized protein 99.3 1.5E-11 5E-16 101.4 8.9 86 151-253 46-133 (226)
160 1qzz_A RDMB, aclacinomycin-10- 99.3 5.1E-11 1.7E-15 105.3 12.9 93 141-244 172-264 (374)
161 3cgg_A SAM-dependent methyltra 99.3 7E-11 2.4E-15 94.0 12.6 78 151-242 44-122 (195)
162 2jjq_A Uncharacterized RNA met 99.3 7.9E-11 2.7E-15 106.2 14.3 102 140-254 278-379 (425)
163 3ckk_A TRNA (guanine-N(7)-)-me 99.3 2.3E-11 7.8E-16 101.3 9.9 86 151-238 44-133 (235)
164 1g6q_1 HnRNP arginine N-methyl 99.3 4.6E-11 1.6E-15 104.2 12.2 80 150-237 35-114 (328)
165 2qe6_A Uncharacterized protein 99.2 6.3E-11 2.2E-15 100.8 12.6 105 140-254 65-188 (274)
166 3ajd_A Putative methyltransfer 99.2 2.5E-11 8.6E-16 103.2 9.8 87 143-237 75-165 (274)
167 3gwz_A MMCR; methyltransferase 99.2 1.2E-10 4E-15 103.1 14.4 86 150-244 199-284 (369)
168 2vdw_A Vaccinia virus capping 99.2 3.9E-11 1.3E-15 103.5 10.9 99 153-254 48-161 (302)
169 4dzr_A Protein-(glutamine-N5) 99.2 2.8E-12 9.7E-17 103.9 3.5 90 140-238 18-111 (215)
170 3tqs_A Ribosomal RNA small sub 99.2 3.1E-11 1.1E-15 101.7 9.9 85 140-238 18-106 (255)
171 2vdv_E TRNA (guanine-N(7)-)-me 99.2 7.1E-11 2.4E-15 98.7 12.0 85 150-236 46-136 (246)
172 2r3s_A Uncharacterized protein 99.2 1.1E-10 3.6E-15 101.6 13.4 94 140-243 152-247 (335)
173 3fut_A Dimethyladenosine trans 99.2 6.3E-11 2.2E-15 100.6 11.6 95 140-249 36-131 (271)
174 3tm4_A TRNA (guanine N2-)-meth 99.2 4.5E-11 1.5E-15 106.1 11.2 82 151-238 215-296 (373)
175 3dp7_A SAM-dependent methyltra 99.2 1.1E-10 3.7E-15 103.2 13.5 95 152-254 178-279 (363)
176 3i53_A O-methyltransferase; CO 99.2 5E-11 1.7E-15 103.9 11.1 84 152-244 168-251 (332)
177 2aot_A HMT, histamine N-methyl 99.2 1.4E-11 4.7E-16 105.5 7.3 98 152-254 51-164 (292)
178 2a14_A Indolethylamine N-methy 99.2 1.1E-11 3.8E-16 104.6 6.5 101 150-254 52-189 (263)
179 1tw3_A COMT, carminomycin 4-O- 99.2 9.3E-11 3.2E-15 103.2 12.7 93 141-244 173-265 (360)
180 2pjd_A Ribosomal RNA small sub 99.2 3.8E-11 1.3E-15 105.3 10.1 89 140-240 185-273 (343)
181 2avn_A Ubiquinone/menaquinone 99.2 3.6E-11 1.2E-15 101.1 9.4 95 144-253 45-143 (260)
182 4hc4_A Protein arginine N-meth 99.2 5.5E-11 1.9E-15 105.3 10.4 75 151-234 81-155 (376)
183 1x19_A CRTF-related protein; m 99.2 1.9E-10 6.6E-15 101.3 13.9 93 140-243 179-271 (359)
184 1p91_A Ribosomal RNA large sub 99.2 9.3E-11 3.2E-15 98.8 11.3 98 140-253 71-169 (269)
185 3mcz_A O-methyltransferase; ad 99.2 8.3E-11 2.8E-15 103.2 10.9 88 150-244 175-264 (352)
186 3q87_B N6 adenine specific DNA 99.2 6.1E-11 2.1E-15 93.6 9.0 81 140-240 10-90 (170)
187 3bzb_A Uncharacterized protein 99.2 2.5E-10 8.7E-15 97.3 13.4 89 151-242 77-177 (281)
188 2g72_A Phenylethanolamine N-me 99.2 4E-11 1.4E-15 102.3 8.4 111 141-254 59-207 (289)
189 2i62_A Nicotinamide N-methyltr 99.2 2.3E-11 8E-16 101.9 6.7 100 151-253 54-189 (265)
190 1wy7_A Hypothetical protein PH 99.2 3.6E-10 1.2E-14 91.4 13.5 79 151-241 47-125 (207)
191 2frx_A Hypothetical protein YE 99.2 1.6E-10 5.5E-15 105.7 11.9 85 144-236 108-195 (479)
192 1m6y_A S-adenosyl-methyltransf 99.2 8.6E-11 2.9E-15 101.2 9.5 89 140-238 15-108 (301)
193 3adn_A Spermidine synthase; am 99.2 1.3E-10 4.4E-15 99.9 10.5 87 151-239 81-168 (294)
194 3p2e_A 16S rRNA methylase; met 99.2 5.2E-11 1.8E-15 98.4 7.7 105 140-254 14-131 (225)
195 2yxl_A PH0851 protein, 450AA l 99.2 3.7E-10 1.3E-14 102.6 13.6 87 141-235 249-337 (450)
196 3b3j_A Histone-arginine methyl 99.2 2E-10 6.8E-15 105.1 11.8 83 150-241 155-237 (480)
197 1ne2_A Hypothetical protein TA 99.2 3.9E-10 1.3E-14 90.9 12.2 77 151-243 49-125 (200)
198 2b9e_A NOL1/NOP2/SUN domain fa 99.2 2.8E-10 9.7E-15 98.4 12.0 87 142-236 93-182 (309)
199 2qm3_A Predicted methyltransfe 99.1 5.4E-10 1.9E-14 99.1 14.0 96 151-254 170-269 (373)
200 2ip2_A Probable phenazine-spec 99.1 2.3E-10 8E-15 99.6 11.4 90 142-243 159-248 (334)
201 3m4x_A NOL1/NOP2/SUN family pr 99.1 9.1E-11 3.1E-15 106.5 9.1 89 141-237 95-184 (456)
202 2igt_A SAM dependent methyltra 99.1 1.2E-10 4.1E-15 101.8 9.3 86 142-237 143-234 (332)
203 1af7_A Chemotaxis receptor met 99.1 3.5E-10 1.2E-14 96.2 11.6 91 153-244 105-229 (274)
204 3m6w_A RRNA methylase; rRNA me 99.1 9.9E-11 3.4E-15 106.4 8.7 89 140-237 90-179 (464)
205 3cc8_A Putative methyltransfer 99.1 6.3E-11 2.2E-15 96.9 6.7 76 152-243 31-108 (230)
206 3e8s_A Putative SAM dependent 99.1 1.2E-10 4E-15 95.0 7.9 97 140-253 41-143 (227)
207 3hp7_A Hemolysin, putative; st 99.1 9.1E-11 3.1E-15 100.4 6.8 99 141-254 74-177 (291)
208 1o9g_A RRNA methyltransferase; 99.1 6.7E-10 2.3E-14 92.8 11.8 48 153-200 51-99 (250)
209 1ej0_A FTSJ; methyltransferase 99.1 1.9E-10 6.7E-15 89.8 8.0 82 142-241 12-101 (180)
210 1qam_A ERMC' methyltransferase 99.1 4.4E-10 1.5E-14 93.9 10.2 85 140-238 19-104 (244)
211 3k0b_A Predicted N6-adenine-sp 99.1 8.4E-10 2.9E-14 98.5 12.4 91 140-238 190-317 (393)
212 3uzu_A Ribosomal RNA small sub 99.1 6.6E-10 2.2E-14 94.7 10.9 71 140-222 31-102 (279)
213 3gjy_A Spermidine synthase; AP 99.1 2.7E-10 9.4E-15 98.5 8.7 77 155-238 91-169 (317)
214 3bwc_A Spermidine synthase; SA 99.1 3.4E-10 1.2E-14 97.7 9.3 100 151-253 93-201 (304)
215 3c0k_A UPF0064 protein YCCW; P 99.1 1.7E-10 5.6E-15 103.2 7.5 80 152-238 219-303 (396)
216 2plw_A Ribosomal RNA methyltra 99.1 7.1E-10 2.4E-14 89.2 10.4 73 151-240 20-118 (201)
217 1sqg_A SUN protein, FMU protei 99.1 6E-10 2.1E-14 100.6 11.1 87 140-236 235-323 (429)
218 3frh_A 16S rRNA methylase; met 99.1 1.3E-09 4.5E-14 90.2 12.0 80 152-243 104-183 (253)
219 1xj5_A Spermidine synthase 1; 99.1 4.7E-10 1.6E-14 98.1 9.8 82 151-237 118-203 (334)
220 3lcv_B Sisomicin-gentamicin re 99.1 4.6E-10 1.6E-14 93.9 9.1 105 140-253 119-227 (281)
221 3bt7_A TRNA (uracil-5-)-methyl 99.1 3.1E-10 1.1E-14 100.5 8.6 88 154-250 214-317 (369)
222 3giw_A Protein of unknown func 99.1 4.4E-10 1.5E-14 95.2 8.8 97 140-243 66-175 (277)
223 3lst_A CALO1 methyltransferase 99.1 4.2E-10 1.4E-14 98.7 9.0 99 142-254 175-278 (348)
224 3ldu_A Putative methylase; str 99.1 8E-10 2.7E-14 98.4 10.9 91 140-238 184-311 (385)
225 1uir_A Polyamine aminopropyltr 99.1 4.8E-10 1.6E-14 97.2 9.1 88 151-240 75-163 (314)
226 3ldg_A Putative uncharacterize 99.0 1.6E-09 5.6E-14 96.3 12.7 91 140-238 183-310 (384)
227 2as0_A Hypothetical protein PH 99.0 3E-10 1E-14 101.5 7.9 80 152-238 216-299 (396)
228 2r6z_A UPF0341 protein in RSP 99.0 1.3E-10 4.5E-15 98.0 4.5 83 150-240 80-173 (258)
229 1vlm_A SAM-dependent methyltra 99.0 8.7E-10 3E-14 90.2 9.3 81 153-253 47-130 (219)
230 4e2x_A TCAB9; kijanose, tetron 99.0 3E-11 1E-15 108.5 0.5 100 141-253 97-199 (416)
231 1mjf_A Spermidine synthase; sp 99.0 5.2E-10 1.8E-14 95.5 8.2 83 151-238 73-162 (281)
232 1inl_A Spermidine synthase; be 99.0 1E-09 3.5E-14 94.3 10.1 83 152-237 89-172 (296)
233 2yx1_A Hypothetical protein MJ 99.0 8.2E-10 2.8E-14 96.6 9.6 91 150-253 192-282 (336)
234 2b78_A Hypothetical protein SM 99.0 5.5E-10 1.9E-14 99.5 8.5 80 152-238 211-295 (385)
235 1iy9_A Spermidine synthase; ro 99.0 1.5E-09 5E-14 92.4 10.4 99 152-253 74-180 (275)
236 2o07_A Spermidine synthase; st 99.0 1E-09 3.5E-14 94.7 9.1 83 151-238 93-178 (304)
237 4dmg_A Putative uncharacterize 99.0 1.1E-09 3.8E-14 97.7 9.6 78 151-238 212-290 (393)
238 1qyr_A KSGA, high level kasuga 99.0 5.4E-10 1.8E-14 93.9 7.1 93 140-246 10-107 (252)
239 1wxx_A TT1595, hypothetical pr 99.0 3.3E-10 1.1E-14 100.8 5.8 79 150-238 207-289 (382)
240 2pt6_A Spermidine synthase; tr 99.0 1.8E-09 6.1E-14 93.9 8.8 84 151-237 114-198 (321)
241 2i7c_A Spermidine synthase; tr 98.9 1.7E-09 5.8E-14 92.3 8.3 85 151-238 76-161 (283)
242 3ftd_A Dimethyladenosine trans 98.9 1.5E-09 5.3E-14 91.0 7.9 89 140-244 20-110 (249)
243 3ll7_A Putative methyltransfer 98.9 1.5E-09 5.2E-14 97.0 7.6 79 151-238 91-173 (410)
244 3v97_A Ribosomal RNA large sub 98.9 2.8E-09 9.7E-14 101.7 9.9 80 152-237 538-618 (703)
245 4a6d_A Hydroxyindole O-methylt 98.9 5.9E-09 2E-13 91.7 11.2 85 150-244 176-260 (353)
246 3sso_A Methyltransferase; macr 98.9 1.7E-09 5.8E-14 96.0 7.7 88 151-254 214-316 (419)
247 2b2c_A Spermidine synthase; be 98.9 1.9E-09 6.6E-14 93.4 7.7 84 151-237 106-190 (314)
248 2f8l_A Hypothetical protein LM 98.9 7E-09 2.4E-13 90.8 11.1 83 151-241 128-214 (344)
249 1yub_A Ermam, rRNA methyltrans 98.9 2.4E-10 8.2E-15 95.5 1.3 86 140-239 18-104 (245)
250 2nyu_A Putative ribosomal RNA 98.9 5.4E-09 1.9E-13 83.5 9.1 73 150-239 19-108 (196)
251 3dou_A Ribosomal RNA large sub 98.9 4.6E-09 1.6E-13 84.5 8.6 68 151-238 23-101 (191)
252 3opn_A Putative hemolysin; str 98.9 1.8E-09 6.1E-14 89.6 6.3 103 140-254 25-129 (232)
253 1fp1_D Isoliquiritigenin 2'-O- 98.9 3.5E-09 1.2E-13 93.7 8.5 77 151-244 207-283 (372)
254 3reo_A (ISO)eugenol O-methyltr 98.9 4.2E-09 1.4E-13 93.2 8.4 87 151-254 201-292 (368)
255 3cvo_A Methyltransferase-like 98.9 2.1E-08 7.1E-13 81.2 11.7 91 152-253 29-145 (202)
256 1fp2_A Isoflavone O-methyltran 98.9 3.1E-09 1.1E-13 93.3 7.4 77 151-244 186-262 (352)
257 2cmg_A Spermidine synthase; tr 98.9 2E-09 7E-14 90.9 6.0 92 152-253 71-162 (262)
258 2oyr_A UPF0341 protein YHIQ; a 98.9 3.6E-09 1.2E-13 89.1 7.3 96 140-241 75-177 (258)
259 2oxt_A Nucleoside-2'-O-methylt 98.9 5.9E-10 2E-14 94.4 2.3 77 150-237 71-149 (265)
260 3p9c_A Caffeic acid O-methyltr 98.9 7.6E-09 2.6E-13 91.4 9.5 87 151-254 199-290 (364)
261 2wa2_A Non-structural protein 98.8 5.6E-10 1.9E-14 95.0 1.7 77 150-237 79-157 (276)
262 3axs_A Probable N(2),N(2)-dime 98.8 4.9E-09 1.7E-13 93.3 7.4 95 152-253 51-149 (392)
263 2dul_A N(2),N(2)-dimethylguano 98.8 6.9E-09 2.4E-13 92.1 8.3 98 153-253 47-155 (378)
264 2okc_A Type I restriction enzy 98.8 3.8E-08 1.3E-12 89.2 12.7 91 140-239 160-264 (445)
265 2zfu_A Nucleomethylin, cerebra 98.8 1.1E-08 3.6E-13 83.2 7.5 86 140-253 55-142 (215)
266 3v97_A Ribosomal RNA large sub 98.8 6.1E-08 2.1E-12 92.5 12.5 92 140-238 179-313 (703)
267 2ih2_A Modification methylase 98.7 1.4E-08 4.8E-13 90.9 7.4 81 140-238 28-108 (421)
268 1zg3_A Isoflavanone 4'-O-methy 98.7 1.8E-08 6.3E-13 88.5 7.2 77 151-244 191-267 (358)
269 2ld4_A Anamorsin; methyltransf 98.7 8.2E-09 2.8E-13 81.3 3.7 78 150-254 9-93 (176)
270 2k4m_A TR8_protein, UPF0146 pr 98.7 1.2E-07 4.2E-12 72.1 9.4 90 140-252 22-113 (153)
271 2ar0_A M.ecoki, type I restric 98.6 1.4E-07 4.9E-12 87.4 10.5 92 140-239 158-272 (541)
272 2p41_A Type II methyltransfera 98.6 1.9E-08 6.4E-13 86.8 4.2 75 150-238 79-158 (305)
273 1wg8_A Predicted S-adenosylmet 98.6 7.4E-08 2.5E-12 81.4 7.0 85 140-239 11-100 (285)
274 2qfm_A Spermine synthase; sper 98.5 6.4E-08 2.2E-12 84.8 5.6 82 153-237 188-276 (364)
275 2xyq_A Putative 2'-O-methyl tr 98.5 1.6E-07 5.3E-12 80.3 6.6 66 150-237 60-132 (290)
276 3lkd_A Type I restriction-modi 98.4 1.1E-06 3.7E-11 81.5 11.0 95 140-238 206-307 (542)
277 3khk_A Type I restriction-modi 98.4 5.7E-07 1.9E-11 83.4 7.1 92 140-239 234-340 (544)
278 3tka_A Ribosomal RNA small sub 98.3 5.8E-07 2E-11 77.7 5.1 88 140-239 46-139 (347)
279 4gqb_A Protein arginine N-meth 98.3 2.5E-06 8.7E-11 80.0 9.8 75 154-235 358-435 (637)
280 4fzv_A Putative methyltransfer 98.2 2.8E-06 9.6E-11 74.6 8.5 92 143-238 140-233 (359)
281 3o4f_A Spermidine synthase; am 98.2 2.2E-05 7.5E-10 66.9 12.1 85 151-237 81-166 (294)
282 2qy6_A UPF0209 protein YFCK; s 98.1 3.9E-06 1.3E-10 70.4 6.6 84 152-236 59-181 (257)
283 2zig_A TTHA0409, putative modi 98.1 1.1E-05 3.8E-10 69.0 9.2 56 140-201 225-280 (297)
284 3s1s_A Restriction endonucleas 98.1 6.2E-06 2.1E-10 78.8 8.0 86 151-238 319-409 (878)
285 4auk_A Ribosomal RNA large sub 98.1 6.7E-06 2.3E-10 72.1 7.4 73 150-238 208-280 (375)
286 3ufb_A Type I restriction-modi 98.0 9.4E-06 3.2E-10 75.0 7.9 91 140-238 206-312 (530)
287 3ua3_A Protein arginine N-meth 98.0 7.6E-06 2.6E-10 77.1 7.1 77 154-236 410-503 (745)
288 2wk1_A NOVP; transferase, O-me 98.0 2.2E-05 7.6E-10 66.6 8.7 97 152-252 105-234 (282)
289 1i4w_A Mitochondrial replicati 97.9 5.3E-05 1.8E-09 66.3 9.2 70 140-221 41-116 (353)
290 3gcz_A Polyprotein; flavivirus 97.7 1.3E-05 4.3E-10 67.5 2.2 90 150-249 87-176 (282)
291 3evf_A RNA-directed RNA polyme 97.7 1.6E-05 5.6E-10 66.7 2.7 81 150-239 71-151 (277)
292 3p8z_A Mtase, non-structural p 97.7 1.4E-05 4.7E-10 65.5 2.1 90 150-250 75-165 (267)
293 3lkz_A Non-structural protein 97.6 0.00014 4.9E-09 61.4 7.3 91 150-251 91-182 (321)
294 1g60_A Adenine-specific methyl 97.6 0.00016 5.5E-09 60.5 7.5 48 151-201 210-257 (260)
295 2py6_A Methyltransferase FKBM; 97.4 0.00057 2E-08 61.0 8.7 65 151-220 224-292 (409)
296 2px2_A Genome polyprotein [con 97.4 4.6E-05 1.6E-09 63.3 1.4 85 150-251 70-161 (269)
297 3c6k_A Spermine synthase; sper 97.2 0.00033 1.1E-08 61.6 5.2 82 152-236 204-292 (381)
298 3g7u_A Cytosine-specific methy 97.0 0.0026 8.8E-08 56.1 8.9 74 155-241 3-84 (376)
299 3eld_A Methyltransferase; flav 97.0 0.00045 1.6E-08 58.5 3.4 81 150-239 78-158 (300)
300 1g55_A DNA cytosine methyltran 96.7 0.0028 9.5E-08 55.2 6.8 73 155-238 3-78 (343)
301 2efj_A 3,7-dimethylxanthine me 96.6 0.016 5.3E-07 51.2 10.8 80 154-241 53-162 (384)
302 3b5i_A S-adenosyl-L-methionine 96.5 0.014 4.7E-07 51.3 10.0 88 154-242 53-164 (374)
303 2c7p_A Modification methylase 96.5 0.0055 1.9E-07 53.0 7.2 71 153-238 10-81 (327)
304 2oo3_A Protein involved in cat 96.4 0.0011 3.6E-08 56.0 2.1 76 153-239 91-170 (283)
305 1boo_A Protein (N-4 cytosine-s 96.2 0.0065 2.2E-07 52.3 5.9 56 140-201 242-297 (323)
306 1eg2_A Modification methylase 96.1 0.012 4E-07 50.7 6.8 48 151-201 240-290 (319)
307 3ubt_Y Modification methylase 95.6 0.02 6.7E-07 49.1 6.4 70 155-238 1-71 (331)
308 4h0n_A DNMT2; SAH binding, tra 95.6 0.022 7.4E-07 49.3 6.4 74 155-239 4-80 (333)
309 2qrv_A DNA (cytosine-5)-methyl 95.5 0.03 1E-06 47.6 7.0 76 151-238 13-93 (295)
310 1zkd_A DUF185; NESG, RPR58, st 95.3 0.41 1.4E-05 42.1 13.7 78 153-242 80-163 (387)
311 3qv2_A 5-cytosine DNA methyltr 95.2 0.029 9.8E-07 48.4 5.9 76 154-241 10-89 (327)
312 3r24_A NSP16, 2'-O-methyl tran 95.1 0.066 2.3E-06 45.3 7.4 77 140-238 93-179 (344)
313 1m6e_X S-adenosyl-L-methionnin 95.1 0.014 4.7E-07 51.1 3.5 85 153-242 51-153 (359)
314 3me5_A Cytosine-specific methy 94.7 0.025 8.5E-07 51.4 4.4 78 154-241 88-182 (482)
315 4f3n_A Uncharacterized ACR, CO 93.4 0.21 7.1E-06 44.6 7.5 47 154-200 138-188 (432)
316 2vz8_A Fatty acid synthase; tr 92.7 0.038 1.3E-06 59.7 2.0 81 152-241 1239-1324(2512)
317 1rjd_A PPM1P, carboxy methyl t 92.5 1.5 5.3E-05 37.6 11.6 91 152-245 96-211 (334)
318 3swr_A DNA (cytosine-5)-methyl 92.5 0.26 9E-06 48.6 7.4 44 154-198 540-583 (1002)
319 3llv_A Exopolyphosphatase-rela 92.4 0.44 1.5E-05 34.9 7.1 69 154-237 6-79 (141)
320 3fwz_A Inner membrane protein 92.0 0.28 9.4E-06 36.3 5.6 69 154-237 7-80 (140)
321 2dph_A Formaldehyde dismutase; 91.9 0.3 1E-05 42.8 6.5 46 150-196 182-228 (398)
322 3s2e_A Zinc-containing alcohol 91.6 0.49 1.7E-05 40.4 7.4 45 150-196 163-208 (340)
323 4fn4_A Short chain dehydrogena 91.1 1.6 5.5E-05 35.9 9.8 78 153-238 6-94 (254)
324 3qiv_A Short-chain dehydrogena 90.7 1.2 4.2E-05 35.9 8.7 78 153-238 8-96 (253)
325 1f8f_A Benzyl alcohol dehydrog 90.5 0.55 1.9E-05 40.6 6.7 47 150-197 187-234 (371)
326 1pl8_A Human sorbitol dehydrog 90.4 0.71 2.4E-05 39.7 7.3 46 150-196 168-214 (356)
327 3pvc_A TRNA 5-methylaminomethy 90.4 0.2 7E-06 47.3 4.1 86 153-239 58-182 (689)
328 4ft4_B DNA (cytosine-5)-methyl 90.1 0.96 3.3E-05 43.4 8.6 45 154-198 212-260 (784)
329 4dkj_A Cytosine-specific methy 90.0 0.46 1.6E-05 42.0 5.9 47 154-200 10-60 (403)
330 3c85_A Putative glutathione-re 90.0 1.1 3.8E-05 34.3 7.5 68 154-236 39-113 (183)
331 1e3j_A NADP(H)-dependent ketos 89.9 0.77 2.6E-05 39.4 7.2 45 150-196 165-210 (352)
332 1uuf_A YAHK, zinc-type alcohol 89.8 0.56 1.9E-05 40.7 6.2 45 150-196 191-236 (369)
333 3two_A Mannitol dehydrogenase; 89.6 0.46 1.6E-05 40.7 5.5 45 150-196 173-218 (348)
334 4g81_D Putative hexonate dehyd 89.6 1.5 5.3E-05 36.0 8.4 78 153-238 8-96 (255)
335 1kol_A Formaldehyde dehydrogen 89.6 0.82 2.8E-05 39.9 7.1 46 150-196 182-228 (398)
336 1lss_A TRK system potassium up 89.4 2.7 9.2E-05 30.1 8.9 71 154-238 4-79 (140)
337 3h7a_A Short chain dehydrogena 89.0 1.8 6.3E-05 35.1 8.5 78 153-238 6-93 (252)
338 3ucx_A Short chain dehydrogena 88.8 2.6 8.9E-05 34.3 9.4 78 153-238 10-98 (264)
339 3o38_A Short chain dehydrogena 88.6 1.7 5.9E-05 35.3 8.1 79 153-238 21-111 (266)
340 3ius_A Uncharacterized conserv 88.6 2.5 8.6E-05 34.5 9.2 68 155-239 6-74 (286)
341 3o26_A Salutaridine reductase; 88.5 1.6 5.4E-05 36.2 7.9 80 153-239 11-102 (311)
342 3m6i_A L-arabinitol 4-dehydrog 88.4 0.89 3E-05 39.1 6.5 47 150-197 176-223 (363)
343 3av4_A DNA (cytosine-5)-methyl 88.4 1.2 4.2E-05 45.1 8.2 45 153-198 850-894 (1330)
344 3tjr_A Short chain dehydrogena 88.3 2.5 8.6E-05 35.2 9.1 78 153-238 30-118 (301)
345 3sju_A Keto reductase; short-c 88.2 3 0.0001 34.3 9.5 78 153-238 23-111 (279)
346 1fmc_A 7 alpha-hydroxysteroid 88.2 2.9 0.0001 33.4 9.2 78 153-238 10-98 (255)
347 2ae2_A Protein (tropinone redu 88.2 3.2 0.00011 33.6 9.4 78 153-238 8-97 (260)
348 3l9w_A Glutathione-regulated p 87.9 1.1 3.8E-05 39.6 6.9 69 154-237 4-77 (413)
349 3rkr_A Short chain oxidoreduct 87.9 2.6 8.8E-05 34.3 8.7 78 153-238 28-116 (262)
350 3v8b_A Putative dehydrogenase, 87.8 3.3 0.00011 34.2 9.4 78 153-238 27-115 (283)
351 4fs3_A Enoyl-[acyl-carrier-pro 87.7 1.4 4.7E-05 36.0 6.9 80 153-238 5-96 (256)
352 3awd_A GOX2181, putative polyo 87.6 3.2 0.00011 33.3 9.2 78 153-238 12-100 (260)
353 3lyl_A 3-oxoacyl-(acyl-carrier 87.4 2.8 9.5E-05 33.6 8.6 78 153-238 4-92 (247)
354 3lf2_A Short chain oxidoreduct 87.4 4.9 0.00017 32.6 10.2 80 153-238 7-97 (265)
355 3uog_A Alcohol dehydrogenase; 87.3 0.92 3.2E-05 39.1 5.9 45 150-196 186-231 (363)
356 4eso_A Putative oxidoreductase 87.2 3.3 0.00011 33.6 9.0 75 153-238 7-92 (255)
357 1ae1_A Tropinone reductase-I; 87.1 2.4 8.2E-05 34.7 8.1 78 153-238 20-109 (273)
358 3ioy_A Short-chain dehydrogena 87.1 2.8 9.5E-05 35.4 8.7 80 153-238 7-97 (319)
359 3fpc_A NADP-dependent alcohol 87.0 0.99 3.4E-05 38.7 5.9 47 150-197 163-210 (352)
360 1id1_A Putative potassium chan 86.9 2.8 9.7E-05 31.0 7.8 73 154-238 3-81 (153)
361 4egf_A L-xylulose reductase; s 86.7 4.9 0.00017 32.7 9.8 79 153-238 19-108 (266)
362 3jv7_A ADH-A; dehydrogenase, n 86.5 1.3 4.4E-05 37.8 6.3 46 150-196 168-214 (345)
363 1rjw_A ADH-HT, alcohol dehydro 86.4 2.4 8E-05 36.1 7.9 45 150-196 161-206 (339)
364 3sx2_A Putative 3-ketoacyl-(ac 86.4 3.7 0.00013 33.6 8.9 79 153-239 12-113 (278)
365 1piw_A Hypothetical zinc-type 86.4 1.2 3.9E-05 38.4 6.0 45 150-196 176-221 (360)
366 3pk0_A Short-chain dehydrogena 86.3 3.1 0.00011 33.8 8.4 79 153-238 9-98 (262)
367 3r1i_A Short-chain type dehydr 86.3 2.5 8.5E-05 34.8 7.8 78 153-238 31-119 (276)
368 3rku_A Oxidoreductase YMR226C; 86.3 6.5 0.00022 32.5 10.4 80 153-238 32-125 (287)
369 3gaf_A 7-alpha-hydroxysteroid 86.2 3.6 0.00012 33.3 8.7 78 153-238 11-99 (256)
370 3pgx_A Carveol dehydrogenase; 86.2 5.3 0.00018 32.7 9.8 78 153-238 14-115 (280)
371 4f6c_A AUSA reductase domain p 86.2 3.3 0.00011 36.2 9.0 86 153-240 68-162 (427)
372 3pxx_A Carveol dehydrogenase; 86.1 4.2 0.00014 33.3 9.2 79 153-239 9-110 (287)
373 2jah_A Clavulanic acid dehydro 86.1 3 0.0001 33.5 8.1 78 153-238 6-94 (247)
374 4imr_A 3-oxoacyl-(acyl-carrier 85.7 3.6 0.00012 33.8 8.6 78 153-238 32-119 (275)
375 3t4x_A Oxidoreductase, short c 85.6 4.1 0.00014 33.1 8.8 80 153-238 9-95 (267)
376 4ej6_A Putative zinc-binding d 85.6 2 6.8E-05 37.1 7.1 47 150-197 179-226 (370)
377 1wma_A Carbonyl reductase [NAD 85.5 3.8 0.00013 33.0 8.5 78 153-238 3-92 (276)
378 1e7w_A Pteridine reductase; di 85.4 7.5 0.00026 32.1 10.4 63 153-222 8-72 (291)
379 3imf_A Short chain dehydrogena 85.4 2.7 9.2E-05 34.1 7.5 78 153-238 5-93 (257)
380 1iy8_A Levodione reductase; ox 85.2 4.5 0.00016 32.8 8.9 80 153-238 12-102 (267)
381 1vj0_A Alcohol dehydrogenase, 85.2 1.7 5.8E-05 37.7 6.5 46 150-196 191-238 (380)
382 1yb1_A 17-beta-hydroxysteroid 85.0 2.7 9.2E-05 34.4 7.4 78 153-238 30-118 (272)
383 3tfo_A Putative 3-oxoacyl-(acy 85.0 2.3 7.9E-05 34.9 6.9 78 153-238 3-91 (264)
384 2h6e_A ADH-4, D-arabinose 1-de 84.8 1.4 4.8E-05 37.6 5.7 44 150-196 168-214 (344)
385 4fgs_A Probable dehydrogenase 84.8 4.4 0.00015 33.6 8.6 75 153-238 28-113 (273)
386 1yqd_A Sinapyl alcohol dehydro 84.7 1.2 4.1E-05 38.5 5.3 45 150-196 183-229 (366)
387 1p0f_A NADP-dependent alcohol 84.7 1.4 4.7E-05 38.1 5.7 46 150-196 188-234 (373)
388 4dry_A 3-oxoacyl-[acyl-carrier 84.6 4.4 0.00015 33.4 8.6 79 153-238 32-121 (281)
389 2rhc_B Actinorhodin polyketide 84.6 4.7 0.00016 33.0 8.7 78 153-238 21-109 (277)
390 3svt_A Short-chain type dehydr 84.6 5.4 0.00019 32.6 9.1 81 153-238 10-101 (281)
391 1h2b_A Alcohol dehydrogenase; 84.5 2.6 9E-05 36.1 7.4 45 150-196 183-229 (359)
392 3gms_A Putative NADPH:quinone 84.5 0.89 3E-05 38.8 4.3 45 150-196 141-187 (340)
393 2aef_A Calcium-gated potassium 84.5 5.3 0.00018 31.8 8.8 69 153-237 8-80 (234)
394 3ic5_A Putative saccharopine d 84.4 3.8 0.00013 28.3 7.0 71 153-238 4-79 (118)
395 4hp8_A 2-deoxy-D-gluconate 3-d 84.3 9.4 0.00032 31.1 10.3 76 153-238 8-89 (247)
396 1mxh_A Pteridine reductase 2; 84.3 6 0.0002 32.2 9.3 79 153-238 10-104 (276)
397 3f9i_A 3-oxoacyl-[acyl-carrier 84.3 2.5 8.4E-05 33.9 6.7 77 151-238 11-94 (249)
398 2g1u_A Hypothetical protein TM 84.3 0.82 2.8E-05 34.2 3.6 85 152-250 17-106 (155)
399 1cdo_A Alcohol dehydrogenase; 84.2 1.6 5.3E-05 37.8 5.8 46 150-196 189-235 (374)
400 2nwq_A Probable short-chain de 83.9 13 0.00043 30.4 11.1 75 155-238 22-107 (272)
401 3ai3_A NADPH-sorbose reductase 83.9 5.9 0.0002 32.0 9.0 79 153-238 6-95 (263)
402 3n74_A 3-ketoacyl-(acyl-carrie 83.9 4.4 0.00015 32.7 8.2 76 153-239 8-94 (261)
403 1pqw_A Polyketide synthase; ro 83.8 1.1 3.9E-05 34.7 4.3 44 150-195 35-80 (198)
404 3ps9_A TRNA 5-methylaminomethy 83.6 1.7 5.9E-05 40.8 6.2 85 153-238 66-189 (676)
405 1jvb_A NAD(H)-dependent alcoho 83.6 3 0.0001 35.5 7.3 45 150-196 167-214 (347)
406 3t7c_A Carveol dehydrogenase; 83.6 4.3 0.00015 33.7 8.1 78 153-238 27-127 (299)
407 2qhx_A Pteridine reductase 1; 83.6 9.5 0.00033 32.1 10.4 63 153-222 45-109 (328)
408 1w6u_A 2,4-dienoyl-COA reducta 83.6 8.9 0.0003 31.5 10.1 79 153-238 25-114 (302)
409 3cxt_A Dehydrogenase with diff 83.5 5 0.00017 33.3 8.5 78 153-238 33-121 (291)
410 2jhf_A Alcohol dehydrogenase E 83.4 1.7 5.9E-05 37.4 5.8 46 150-196 188-234 (374)
411 1e3i_A Alcohol dehydrogenase, 83.4 1.7 5.6E-05 37.6 5.6 46 150-196 192-238 (376)
412 1y1p_A ARII, aldehyde reductas 83.4 11 0.00038 31.2 10.7 81 152-239 9-94 (342)
413 3l6e_A Oxidoreductase, short-c 83.3 6.4 0.00022 31.4 8.8 74 154-238 3-87 (235)
414 3uve_A Carveol dehydrogenase ( 83.3 4.3 0.00015 33.3 8.0 78 153-238 10-114 (286)
415 3ftp_A 3-oxoacyl-[acyl-carrier 83.2 5.5 0.00019 32.6 8.6 78 153-238 27-115 (270)
416 2fzw_A Alcohol dehydrogenase c 83.2 1.7 5.9E-05 37.4 5.7 46 150-196 187-233 (373)
417 1xu9_A Corticosteroid 11-beta- 83.1 4.7 0.00016 33.1 8.2 79 153-238 27-117 (286)
418 4fc7_A Peroxisomal 2,4-dienoyl 83.1 5.4 0.00019 32.6 8.5 79 153-238 26-115 (277)
419 3l77_A Short-chain alcohol deh 83.0 4.6 0.00016 31.9 7.8 78 154-238 2-90 (235)
420 4ibo_A Gluconate dehydrogenase 82.9 2.4 8.3E-05 34.8 6.3 78 153-238 25-113 (271)
421 2c07_A 3-oxoacyl-(acyl-carrier 82.9 5.7 0.0002 32.6 8.6 78 153-238 43-131 (285)
422 3tos_A CALS11; methyltransfera 82.9 7.2 0.00025 32.1 9.0 83 152-238 68-192 (257)
423 3uko_A Alcohol dehydrogenase c 82.9 1.2 4.1E-05 38.6 4.5 46 150-196 190-236 (378)
424 3s55_A Putative short-chain de 82.7 9.7 0.00033 31.0 9.9 78 153-238 9-109 (281)
425 3oec_A Carveol dehydrogenase ( 82.7 5.9 0.0002 33.2 8.7 78 153-238 45-145 (317)
426 1xq1_A Putative tropinone redu 82.6 3.6 0.00012 33.2 7.2 78 153-238 13-102 (266)
427 3f1l_A Uncharacterized oxidore 82.4 5.6 0.00019 32.0 8.2 79 153-238 11-102 (252)
428 4a2c_A Galactitol-1-phosphate 82.3 4.1 0.00014 34.5 7.6 46 150-196 157-203 (346)
429 1zem_A Xylitol dehydrogenase; 82.3 3.8 0.00013 33.2 7.2 78 153-238 6-94 (262)
430 3op4_A 3-oxoacyl-[acyl-carrier 82.3 6.4 0.00022 31.6 8.5 75 153-238 8-93 (248)
431 2hcy_A Alcohol dehydrogenase 1 82.2 1.7 5.9E-05 37.0 5.2 45 150-196 166-212 (347)
432 3gvc_A Oxidoreductase, probabl 82.1 4.6 0.00016 33.2 7.7 75 153-238 28-113 (277)
433 4e6p_A Probable sorbitol dehyd 82.0 4.8 0.00016 32.5 7.7 75 153-238 7-92 (259)
434 4da9_A Short-chain dehydrogena 82.0 5.7 0.00019 32.6 8.2 78 153-238 28-117 (280)
435 3rih_A Short chain dehydrogena 81.8 4.2 0.00015 33.8 7.4 79 153-238 40-129 (293)
436 2gn4_A FLAA1 protein, UDP-GLCN 81.7 2.5 8.7E-05 35.9 6.1 80 153-242 20-105 (344)
437 1geg_A Acetoin reductase; SDR 81.7 4.4 0.00015 32.7 7.3 77 154-238 2-89 (256)
438 4eez_A Alcohol dehydrogenase 1 81.7 4.6 0.00016 34.2 7.8 47 150-197 160-207 (348)
439 3tsc_A Putative oxidoreductase 81.6 5.8 0.0002 32.4 8.1 78 153-238 10-111 (277)
440 3goh_A Alcohol dehydrogenase, 81.5 1.2 4.3E-05 37.3 4.0 44 150-196 139-183 (315)
441 4b7c_A Probable oxidoreductase 81.5 1.9 6.7E-05 36.4 5.3 44 150-195 146-191 (336)
442 2eih_A Alcohol dehydrogenase; 81.5 2.7 9.1E-05 35.8 6.1 45 150-196 163-209 (343)
443 1xg5_A ARPG836; short chain de 81.5 4 0.00014 33.4 7.0 80 153-238 31-121 (279)
444 3nyw_A Putative oxidoreductase 81.3 4.7 0.00016 32.5 7.3 81 153-238 6-97 (250)
445 1v3u_A Leukotriene B4 12- hydr 81.1 2.4 8.1E-05 35.9 5.6 43 150-194 142-186 (333)
446 3ip1_A Alcohol dehydrogenase, 81.1 2.7 9.2E-05 36.7 6.1 47 150-197 210-257 (404)
447 2uvd_A 3-oxoacyl-(acyl-carrier 80.9 3.9 0.00013 32.7 6.7 78 153-238 3-92 (246)
448 3tox_A Short chain dehydrogena 80.7 2.3 7.7E-05 35.2 5.3 78 153-238 7-95 (280)
449 2zat_A Dehydrogenase/reductase 80.7 4.2 0.00014 32.8 6.9 78 153-238 13-101 (260)
450 1spx_A Short-chain reductase f 80.3 4.1 0.00014 33.2 6.7 81 153-238 5-96 (278)
451 4dqx_A Probable oxidoreductase 79.9 9.1 0.00031 31.3 8.8 75 153-238 26-111 (277)
452 4iin_A 3-ketoacyl-acyl carrier 79.7 5.7 0.00019 32.3 7.4 78 153-238 28-117 (271)
453 1nff_A Putative oxidoreductase 79.7 7.2 0.00025 31.5 8.0 75 153-238 6-91 (260)
454 2p91_A Enoyl-[acyl-carrier-pro 79.5 7.2 0.00025 31.9 8.1 79 153-239 20-110 (285)
455 3i1j_A Oxidoreductase, short c 79.5 9.3 0.00032 30.3 8.5 79 153-238 13-104 (247)
456 3vyw_A MNMC2; tRNA wobble urid 79.4 3.6 0.00012 34.9 6.1 83 153-238 96-196 (308)
457 4g65_A TRK system potassium up 79.2 3.9 0.00013 36.6 6.7 61 162-234 9-74 (461)
458 1xkq_A Short-chain reductase f 79.2 3.9 0.00013 33.5 6.2 81 153-238 5-96 (280)
459 2c0c_A Zinc binding alcohol de 79.1 4.6 0.00016 34.6 6.9 45 150-196 160-206 (362)
460 2cf5_A Atccad5, CAD, cinnamyl 79.1 3.4 0.00012 35.4 6.0 44 150-195 176-221 (357)
461 3rwb_A TPLDH, pyridoxal 4-dehy 79.0 5.2 0.00018 32.1 6.9 75 153-238 5-90 (247)
462 3v2h_A D-beta-hydroxybutyrate 78.4 8.2 0.00028 31.7 8.0 79 153-238 24-114 (281)
463 1oaa_A Sepiapterin reductase; 78.4 17 0.0006 29.0 10.0 80 153-238 5-102 (259)
464 2j3h_A NADP-dependent oxidored 78.2 2.6 8.7E-05 35.8 4.9 45 150-196 152-198 (345)
465 2hmt_A YUAA protein; RCK, KTN, 78.1 3.8 0.00013 29.4 5.3 70 154-238 6-80 (144)
466 3oig_A Enoyl-[acyl-carrier-pro 78.0 7.5 0.00026 31.4 7.6 81 153-239 6-98 (266)
467 3afn_B Carbonyl reductase; alp 77.7 2.8 9.5E-05 33.6 4.8 78 153-238 6-95 (258)
468 2wsb_A Galactitol dehydrogenas 77.7 6.9 0.00023 31.2 7.2 75 153-238 10-95 (254)
469 1xhl_A Short-chain dehydrogena 77.2 5 0.00017 33.3 6.4 81 153-238 25-116 (297)
470 3jyn_A Quinone oxidoreductase; 77.2 2.9 0.0001 35.2 5.0 45 150-196 137-183 (325)
471 1gee_A Glucose 1-dehydrogenase 77.1 5 0.00017 32.2 6.2 78 153-238 6-95 (261)
472 2bgk_A Rhizome secoisolaricire 77.0 9.9 0.00034 30.7 8.1 77 153-238 15-102 (278)
473 3ijr_A Oxidoreductase, short c 76.8 14 0.00049 30.3 9.2 78 153-238 46-135 (291)
474 4dmm_A 3-oxoacyl-[acyl-carrier 76.7 6.1 0.00021 32.2 6.7 78 153-238 27-116 (269)
475 3uf0_A Short-chain dehydrogena 76.6 11 0.00037 30.8 8.2 77 153-238 30-116 (273)
476 2h7i_A Enoyl-[acyl-carrier-pro 76.5 3.1 0.00011 33.9 4.9 77 153-239 6-98 (269)
477 3nx4_A Putative oxidoreductase 76.3 3.6 0.00012 34.5 5.3 44 151-196 143-189 (324)
478 1vl8_A Gluconate 5-dehydrogena 76.3 7.3 0.00025 31.7 7.1 78 153-238 20-109 (267)
479 1iz0_A Quinone oxidoreductase; 76.3 1.9 6.5E-05 36.0 3.5 44 151-196 123-168 (302)
480 3ruf_A WBGU; rossmann fold, UD 76.1 4.2 0.00014 34.2 5.7 85 153-240 24-112 (351)
481 3ged_A Short-chain dehydrogena 76.1 12 0.0004 30.5 8.2 72 155-238 3-85 (247)
482 4eye_A Probable oxidoreductase 76.1 2.6 9E-05 35.9 4.4 45 150-196 156-202 (342)
483 3oid_A Enoyl-[acyl-carrier-pro 76.1 7.8 0.00027 31.3 7.2 78 153-238 3-92 (258)
484 4f6l_B AUSA reductase domain p 76.0 8.5 0.00029 34.5 8.0 84 154-239 150-242 (508)
485 3zv4_A CIS-2,3-dihydrobiphenyl 76.0 6 0.0002 32.5 6.5 75 153-238 4-89 (281)
486 3a28_C L-2.3-butanediol dehydr 75.9 4.9 0.00017 32.4 5.8 77 154-238 2-91 (258)
487 3asu_A Short-chain dehydrogena 75.9 18 0.00062 28.9 9.3 72 156-238 2-84 (248)
488 1ja9_A 4HNR, 1,3,6,8-tetrahydr 75.9 5.7 0.0002 32.0 6.3 78 153-238 20-109 (274)
489 2wyu_A Enoyl-[acyl carrier pro 75.8 5.9 0.0002 32.0 6.4 79 153-239 7-97 (261)
490 3enk_A UDP-glucose 4-epimerase 75.8 2.4 8.2E-05 35.6 4.1 80 153-239 4-89 (341)
491 4gkb_A 3-oxoacyl-[acyl-carrier 75.8 9.7 0.00033 31.1 7.7 77 153-238 6-93 (258)
492 3fbg_A Putative arginate lyase 75.7 5.1 0.00017 34.0 6.2 42 153-196 150-193 (346)
493 3rd5_A Mypaa.01249.C; ssgcid, 75.7 4.1 0.00014 33.6 5.4 75 153-238 15-96 (291)
494 3ek2_A Enoyl-(acyl-carrier-pro 75.6 19 0.00066 28.8 9.5 81 151-239 11-103 (271)
495 2pnf_A 3-oxoacyl-[acyl-carrier 75.6 6.3 0.00022 31.2 6.4 79 153-238 6-95 (248)
496 2cfc_A 2-(R)-hydroxypropyl-COM 75.3 5.6 0.00019 31.7 6.0 77 154-238 2-90 (250)
497 2b4q_A Rhamnolipids biosynthes 75.3 7.4 0.00025 31.8 6.9 77 153-238 28-115 (276)
498 3e8x_A Putative NAD-dependent 75.3 11 0.00038 29.6 7.8 73 153-239 20-95 (236)
499 3l4b_C TRKA K+ channel protien 75.3 5.4 0.00018 31.4 5.8 68 156-237 2-74 (218)
500 4dyv_A Short-chain dehydrogena 75.1 4.4 0.00015 33.2 5.4 75 153-238 27-112 (272)
No 1
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.90 E-value=3e-23 Score=172.18 Aligned_cols=171 Identities=27% Similarity=0.504 Sum_probs=140.3
Q ss_pred CccCCCChHHHHHHHHHcCCcCcHHHHHHHHhccccccccCC-CCCCCCCcCccccccCCCccCccchhhhhhhhcCCCc
Q psy425 2 KSYDITSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG-YIDSPHNFGTNSIVERPSYVSSCSIWYLVICLGKGSK 80 (254)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~r~~f~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
..+...++++|+++|++.|++.++++.+++..+||+.|+|.. |.|.+.+++.+..+
T Consensus 9 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~a~~~~~r~~f~~~~~y~d~~~~~~~~~~~----------------------- 65 (227)
T 1r18_A 9 WRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTI----------------------- 65 (227)
T ss_dssp CCCBCSSHHHHHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSCTTBSSCEEEETTEEE-----------------------
T ss_pred eecCccHHHHHHHHHHhcCCCCCHHHHHHHHhCCHHHcCCcccccCCCcccCCCCcc-----------------------
Confidence 357788899999999999998999999999999999999975 88888777766655
Q ss_pred ccccccceecCCCcccccccchhhhhhhccccCCCCCccchhhhhcccCCCCchhcchHHHHHHHHhhhcCCCCCEEEEE
Q psy425 81 SIFQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDL 160 (254)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~VLDi 160 (254)
++|.+ .+.+++.+...+.++.+|||+
T Consensus 66 ----------------------------------------~~p~~--------------~~~~~~~l~~~~~~~~~VLdi 91 (227)
T 1r18_A 66 ----------------------------------------SAPHM--------------HAFALEYLRDHLKPGARILDV 91 (227)
T ss_dssp ----------------------------------------CCHHH--------------HHHHHHHTTTTCCTTCEEEEE
T ss_pred ----------------------------------------CChHH--------------HHHHHHHHHhhCCCCCEEEEE
Confidence 56777 788888885557889999999
Q ss_pred cCCCChHHHHHHHHcCC-----CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEEec
Q psy425 161 GFGSGFMSCCMARMVGD-----KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFG 235 (254)
Q Consensus 161 G~G~G~~t~~la~~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~~~ 235 (254)
|||+|+++..+++..+. .++|+++|+++++++.|++++...+...+...+++ +..+|+...++..++||+|++.
T Consensus 92 G~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~fD~I~~~ 170 (227)
T 1r18_A 92 GSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLL-IVEGDGRKGYPPNAPYNAIHVG 170 (227)
T ss_dssp SCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEE-EEESCGGGCCGGGCSEEEEEEC
T ss_pred CCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceE-EEECCcccCCCcCCCccEEEEC
Confidence 99999999999987642 35899999999999999999876310000046899 9999998755554679999999
Q ss_pred CcCcCchHHHHHHHH
Q psy425 236 SGVKHIPIEVSKLCR 250 (254)
Q Consensus 236 ~~~~~~~~~l~~~lr 250 (254)
.+++++++.+.++|+
T Consensus 171 ~~~~~~~~~~~~~Lk 185 (227)
T 1r18_A 171 AAAPDTPTELINQLA 185 (227)
T ss_dssp SCBSSCCHHHHHTEE
T ss_pred CchHHHHHHHHHHhc
Confidence 999999877666554
No 2
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.90 E-value=1.3e-22 Score=168.12 Aligned_cols=170 Identities=25% Similarity=0.482 Sum_probs=137.2
Q ss_pred ccCCCChHHHHHHHHHcCCcCcHHHHHHHHhccccccccCC-CCCCCCCcCccccccCCCccCccchhhhhhhhcCCCcc
Q psy425 3 SYDITSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG-YIDSPHNFGTNSIVERPSYVSSCSIWYLVICLGKGSKS 81 (254)
Q Consensus 3 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~r~~f~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
.+.++++++|+++|+..|++.++++.+++..+||+.|+|.. |.+.+..++.+..+
T Consensus 6 ~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~r~~f~p~~~y~d~~~~~~~~~~~------------------------ 61 (227)
T 2pbf_A 6 KLSENNHKSLLENLKRRGIIDDDDVYNTMLQVDRGKYIKEIPYIDTPVYISHGVTI------------------------ 61 (227)
T ss_dssp ---CCCHHHHHHHHHHTTSCCCHHHHHHHHTSCGGGTCSSSTTSSSCEEEETTEEE------------------------
T ss_pred ccCchhHHHHHHHHHhcCCcCCHHHHHHHHhCCHHHcCCcccCCCCccccCCCCcc------------------------
Confidence 46788999999999999988999999999999999999975 77777776665554
Q ss_pred cccccceecCCCcccccccchhhhhhhccccCCCCCccchhhhhcccCCCCchhcchHHHHHHHHhhhcCCCCCEEEEEc
Q psy425 82 IFQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLG 161 (254)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~VLDiG 161 (254)
+.|.+ ...+++.+...+.++.+|||||
T Consensus 62 ---------------------------------------~~p~~--------------~~~~~~~l~~~~~~~~~VLdiG 88 (227)
T 2pbf_A 62 ---------------------------------------SAPHM--------------HALSLKRLINVLKPGSRAIDVG 88 (227)
T ss_dssp ---------------------------------------CCHHH--------------HHHHHHHHTTTSCTTCEEEEES
T ss_pred ---------------------------------------CChHH--------------HHHHHHHHHhhCCCCCEEEEEC
Confidence 45566 7777888754578899999999
Q ss_pred CCCChHHHHHHHHcC----CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----cCCCCccEEE
Q psy425 162 FGSGFMSCCMARMVG----DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----KKNGPYDVIH 233 (254)
Q Consensus 162 ~G~G~~t~~la~~~~----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----~~~~~fD~I~ 233 (254)
||+|+++..+++..+ +.++|+++|+++++++.|++++...+...+...+++ +..+|+.... ...++||+|+
T Consensus 89 ~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~~~~~fD~I~ 167 (227)
T 2pbf_A 89 SGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFK-IIHKNIYQVNEEEKKELGLFDAIH 167 (227)
T ss_dssp CTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEE-EEECCGGGCCHHHHHHHCCEEEEE
T ss_pred CCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEE-EEECChHhcccccCccCCCcCEEE
Confidence 999999999999876 556899999999999999999887520000146899 9999998754 4456799999
Q ss_pred ecCcCcCchHHHHHHHH
Q psy425 234 FGSGVKHIPIEVSKLCR 250 (254)
Q Consensus 234 ~~~~~~~~~~~l~~~lr 250 (254)
+..+++++++.+.++|+
T Consensus 168 ~~~~~~~~~~~~~~~Lk 184 (227)
T 2pbf_A 168 VGASASELPEILVDLLA 184 (227)
T ss_dssp ECSBBSSCCHHHHHHEE
T ss_pred ECCchHHHHHHHHHhcC
Confidence 99999999877766654
No 3
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.88 E-value=1.7e-21 Score=161.20 Aligned_cols=171 Identities=32% Similarity=0.551 Sum_probs=136.0
Q ss_pred CccCCCChHHHHHHHHHcCCcCcHHHHHHHHhccccccccCC-CCCCCCCcCccccccCCCccCccchhhhhhhhcCCCc
Q psy425 2 KSYDITSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG-YIDSPHNFGTNSIVERPSYVSSCSIWYLVICLGKGSK 80 (254)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~r~~f~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
-.+.+.++++++++|++.|++.++.+.+++..+||+.|+|.. |.+.+...+.+..+
T Consensus 2 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~~y~~~~~~~~~~~~~----------------------- 58 (226)
T 1i1n_A 2 WKSGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNPYMDSPQSIGFQATI----------------------- 58 (226)
T ss_dssp CCCCCSSHHHHHHHHHHTTSCCSHHHHHHHHTSCGGGTCSSCTTSSSCEEEETTEEE-----------------------
T ss_pred cCcCCchHHHHHHHHHHcCCcCCHHHHHHHHhCCHHHcCCCccCCCCccccCCCcee-----------------------
Confidence 457788999999999999998999999999999999999975 76665544433333
Q ss_pred ccccccceecCCCcccccccchhhhhhhccccCCCCCccchhhhhcccCCCCchhcchHHHHHHHHhhhcCCCCCEEEEE
Q psy425 81 SIFQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDL 160 (254)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~VLDi 160 (254)
+.|.+ ...+++.+...+.++.+|||+
T Consensus 59 ----------------------------------------~~p~~--------------~~~~l~~l~~~~~~~~~vLDi 84 (226)
T 1i1n_A 59 ----------------------------------------SAPHM--------------HAYALELLFDQLHEGAKALDV 84 (226)
T ss_dssp ----------------------------------------CCHHH--------------HHHHHHHTTTTSCTTCEEEEE
T ss_pred ----------------------------------------cCHHH--------------HHHHHHHHHhhCCCCCEEEEE
Confidence 45666 777788874447889999999
Q ss_pred cCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEEecCcCcC
Q psy425 161 GFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKH 240 (254)
Q Consensus 161 G~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~~~~~~~~ 240 (254)
|||+|..+..+++..++.++|+++|+++.+++.+++++..++.......+++ +..+|+.......++||+|++...+++
T Consensus 85 G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d~~~~~~~~~~fD~i~~~~~~~~ 163 (226)
T 1i1n_A 85 GSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQ-LVVGDGRMGYAEEAPYDAIHVGAAAPV 163 (226)
T ss_dssp TCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEE-EEESCGGGCCGGGCCEEEEEECSBBSS
T ss_pred cCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEE-EEECCcccCcccCCCcCEEEECCchHH
Confidence 9999999999999876667899999999999999999887420000145899 999999865555567999999999999
Q ss_pred chHHHHHHHH
Q psy425 241 IPIEVSKLCR 250 (254)
Q Consensus 241 ~~~~l~~~lr 250 (254)
++..+.+.|+
T Consensus 164 ~~~~~~~~Lk 173 (226)
T 1i1n_A 164 VPQALIDQLK 173 (226)
T ss_dssp CCHHHHHTEE
T ss_pred HHHHHHHhcC
Confidence 8876655443
No 4
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.87 E-value=1.7e-21 Score=159.32 Aligned_cols=154 Identities=25% Similarity=0.390 Sum_probs=127.0
Q ss_pred ChHHHHHHHHHcCCcCcHHHHHHHHhccccccccCC-----CCCCCCCcCccccccCCCccCccchhhhhhhhcCCCccc
Q psy425 8 SNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG-----YIDSPHNFGTNSIVERPSYVSSCSIWYLVICLGKGSKSI 82 (254)
Q Consensus 8 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~r~~f~~~~-----y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
..++++++|+..|+ .++++.+++..+||+.|+|.. |.+.+.+++.+..+
T Consensus 7 ~~~~~~~~l~~~gv-~~~~~~~~~~~~~r~~f~~~~~~~~~y~~~~~~~~~~~~~------------------------- 60 (210)
T 3lbf_A 7 RVQALLDQLRAQGI-QDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTI------------------------- 60 (210)
T ss_dssp HHHHHHHHHHHTTC-CCHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECTTSCEE-------------------------
T ss_pred HHHHHHHHHHHcCC-CCHHHHHHHHhCCHHHcCCcchhhhccCCCccccCCCCEe-------------------------
Confidence 35789999999994 899999999999999999984 55544444444333
Q ss_pred ccccceecCCCcccccccchhhhhhhccccCCCCCccchhhhhcccCCCCchhcchHHHHHHHHhhhcCCCCCEEEEEcC
Q psy425 83 FQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLGF 162 (254)
Q Consensus 83 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~VLDiG~ 162 (254)
+.|.+ ...+++.+ .+.++.+|||+||
T Consensus 61 --------------------------------------~~~~~--------------~~~~~~~l--~~~~~~~vLdiG~ 86 (210)
T 3lbf_A 61 --------------------------------------SQPYM--------------VARMTELL--ELTPQSRVLEIGT 86 (210)
T ss_dssp --------------------------------------CCHHH--------------HHHHHHHT--TCCTTCEEEEECC
T ss_pred --------------------------------------CCHHH--------------HHHHHHhc--CCCCCCEEEEEcC
Confidence 35555 77788888 7889999999999
Q ss_pred CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEEecCcCcCch
Q psy425 163 GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242 (254)
Q Consensus 163 G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~ 242 (254)
|+|.++..+++.. ++|+++|+++++++.|++++..+ +..+++ +..+|+.......++||+|+++.++++++
T Consensus 87 G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~-----~~~~v~-~~~~d~~~~~~~~~~~D~i~~~~~~~~~~ 157 (210)
T 3lbf_A 87 GSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNL-----DLHNVS-TRHGDGWQGWQARAPFDAIIVTAAPPEIP 157 (210)
T ss_dssp TTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHT-----TCCSEE-EEESCGGGCCGGGCCEEEEEESSBCSSCC
T ss_pred CCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHc-----CCCceE-EEECCcccCCccCCCccEEEEccchhhhh
Confidence 9999999999983 37999999999999999999885 356899 99999987665667899999999999999
Q ss_pred HHHHHHHH
Q psy425 243 IEVSKLCR 250 (254)
Q Consensus 243 ~~l~~~lr 250 (254)
+.+.+.|+
T Consensus 158 ~~~~~~L~ 165 (210)
T 3lbf_A 158 TALMTQLD 165 (210)
T ss_dssp THHHHTEE
T ss_pred HHHHHhcc
Confidence 86655543
No 5
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.86 E-value=8.3e-21 Score=155.76 Aligned_cols=156 Identities=27% Similarity=0.458 Sum_probs=125.3
Q ss_pred ChHHHHHHH-HHcCCcCcHHHHHHHHhccccccccCC-----CCCCCCCcCccccccCCCccCccchhhhhhhhcCCCcc
Q psy425 8 SNQQFIQYL-KENNFAQDERVLEAIQWVDRDRFAKDG-----YIDSPHNFGTNSIVERPSYVSSCSIWYLVICLGKGSKS 81 (254)
Q Consensus 8 ~~~~~~~~l-~~~g~~~~~~~~~~~~~~~r~~f~~~~-----y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
.+++|+++| +..| +.++++.+++..+||+.|+|.. |.+.+.+++.+..+
T Consensus 6 ~~~~~~~~l~~~~~-~~~~~v~~a~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~~------------------------ 60 (215)
T 2yxe_A 6 QKKAVIEKLIREGY-IKSKRVIDALLKVPREEFLPEHLKEYAYVDTPLEIGYGQTI------------------------ 60 (215)
T ss_dssp HHHHHHHHHHHHTS-CCCHHHHHHHHHSCGGGGSCGGGGGGTTSCSCEEEETTEEE------------------------
T ss_pred HHHHHHHHhHHhcC-CCCHHHHHHHHhCCHHHcCCchhhhhcccCCCccCCCCcEe------------------------
Confidence 577899999 9899 6899999999999999999986 43333333332222
Q ss_pred cccccceecCCCcccccccchhhhhhhccccCCCCCccchhhhhcccCCCCchhcchHHHHHHHHhhhcCCCCCEEEEEc
Q psy425 82 IFQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLG 161 (254)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~VLDiG 161 (254)
+.|.+ ...+++.+ .+.++.+|||+|
T Consensus 61 ---------------------------------------~~~~~--------------~~~~~~~~--~~~~~~~vLdiG 85 (215)
T 2yxe_A 61 ---------------------------------------SAIHM--------------VGMMCELL--DLKPGMKVLEIG 85 (215)
T ss_dssp ---------------------------------------CCHHH--------------HHHHHHHT--TCCTTCEEEEEC
T ss_pred ---------------------------------------CcHHH--------------HHHHHHhh--CCCCCCEEEEEC
Confidence 34555 67777777 778899999999
Q ss_pred CCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEEecCcCcCc
Q psy425 162 FGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 162 ~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~~~~~~~~~ 241 (254)
||+|.++..+++.+++..+|+++|+++++++.|++++... +..+++ +..+|+.......++||+|++..+++++
T Consensus 86 ~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~v~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 159 (215)
T 2yxe_A 86 TGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL-----GYDNVI-VIVGDGTLGYEPLAPYDRIYTTAAGPKI 159 (215)
T ss_dssp CTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-----TCTTEE-EEESCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-----CCCCeE-EEECCcccCCCCCCCeeEEEECCchHHH
Confidence 9999999999999865568999999999999999998875 356799 9999987655545679999999999999
Q ss_pred hHHHHHHH
Q psy425 242 PIEVSKLC 249 (254)
Q Consensus 242 ~~~l~~~l 249 (254)
++.+.+.|
T Consensus 160 ~~~~~~~L 167 (215)
T 2yxe_A 160 PEPLIRQL 167 (215)
T ss_dssp CHHHHHTE
T ss_pred HHHHHHHc
Confidence 97555444
No 6
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.85 E-value=2.2e-20 Score=155.76 Aligned_cols=156 Identities=26% Similarity=0.379 Sum_probs=127.9
Q ss_pred ChHHHHHHHHHcCCcCcHHHHHHHHhccccccccCC-----CCCCCCCcCccccccCCCccCccchhhhhhhhcCCCccc
Q psy425 8 SNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG-----YIDSPHNFGTNSIVERPSYVSSCSIWYLVICLGKGSKSI 82 (254)
Q Consensus 8 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~r~~f~~~~-----y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (254)
.++.|+++|++.|.+.++++.+++..+||+.|+|.. |.+.+.+++.+...
T Consensus 20 ~~~~l~~~l~~~~~~~~~~~~~a~~~v~r~~f~~~~~~~~~y~~~~~~~~~~~~~------------------------- 74 (235)
T 1jg1_A 20 KWMRTVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTV------------------------- 74 (235)
T ss_dssp HHHHHHHHHHHTTSCCSHHHHHHHHHSCGGGGSCGGGGGGTTSSSCEECSTTCEE-------------------------
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHhCCHhhhCCchhhhcCccCCCcccCCCcee-------------------------
Confidence 467899999977878999999999999999999986 55555555544443
Q ss_pred ccccceecCCCcccccccchhhhhhhccccCCCCCccchhhhhcccCCCCchhcchHHHHHHHHhhhcCCCCCEEEEEcC
Q psy425 83 FQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLGF 162 (254)
Q Consensus 83 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~VLDiG~ 162 (254)
+.+.+ ...+++.+ .+.++.+|||+||
T Consensus 75 --------------------------------------~~~~~--------------~~~~~~~l--~~~~~~~vLdiG~ 100 (235)
T 1jg1_A 75 --------------------------------------SAPHM--------------VAIMLEIA--NLKPGMNILEVGT 100 (235)
T ss_dssp --------------------------------------CCHHH--------------HHHHHHHH--TCCTTCCEEEECC
T ss_pred --------------------------------------ccHHH--------------HHHHHHhc--CCCCCCEEEEEeC
Confidence 35556 77788888 7889999999999
Q ss_pred CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEEecCcCcCch
Q psy425 163 GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242 (254)
Q Consensus 163 G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~ 242 (254)
|+|.++..+++.++ .+|+++|+++.+++.|++++... +..+++ +..+|+...++...+||+|++..++++++
T Consensus 101 G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~-----~~~~v~-~~~~d~~~~~~~~~~fD~Ii~~~~~~~~~ 172 (235)
T 1jg1_A 101 GSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERA-----GVKNVH-VILGDGSKGFPPKAPYDVIIVTAGAPKIP 172 (235)
T ss_dssp TTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHT-----TCCSEE-EEESCGGGCCGGGCCEEEEEECSBBSSCC
T ss_pred CcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHc-----CCCCcE-EEECCcccCCCCCCCccEEEECCcHHHHH
Confidence 99999999999974 47999999999999999999875 356799 99999865555555699999999999998
Q ss_pred HHHHHHHH
Q psy425 243 IEVSKLCR 250 (254)
Q Consensus 243 ~~l~~~lr 250 (254)
+.+.++|+
T Consensus 173 ~~~~~~L~ 180 (235)
T 1jg1_A 173 EPLIEQLK 180 (235)
T ss_dssp HHHHHTEE
T ss_pred HHHHHhcC
Confidence 86655543
No 7
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.84 E-value=7.8e-20 Score=159.24 Aligned_cols=158 Identities=23% Similarity=0.356 Sum_probs=123.1
Q ss_pred hHHHHHHHHHcCCcCcHHHHHHHHhccccccccCCC------CCCCC-CcCccccccCCCccCccchhhhhhhhcCCCcc
Q psy425 9 NQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDGY------IDSPH-NFGTNSIVERPSYVSSCSIWYLVICLGKGSKS 81 (254)
Q Consensus 9 ~~~~~~~l~~~g~~~~~~~~~~~~~~~r~~f~~~~y------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (254)
+++|+++|+..| +.+ ++.+++..+||+.|+|..+ .+.+. +++.+ +
T Consensus 2 ~~~~~~~l~~~g-i~~-~v~~a~~~vpr~~fl~~~~~y~~~y~~~~~~~l~~~--------------------------~ 53 (317)
T 1dl5_A 2 REKLFWILKKYG-VSD-HIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDG--------------------------E 53 (317)
T ss_dssp HHHHHHHHHHTT-CCH-HHHHHHHHSCGGGGCSSCCCHHHHTSSSCEEEEECS--------------------------S
T ss_pred hHHHHHHHHHcC-ChH-HHHHHHHhCCHHHhCCchhccccCccCCCcccccCC--------------------------C
Confidence 568999999999 577 9999999999999999853 23222 22211 0
Q ss_pred cccccceecCCCcccccccchhhhhhhccccCCCCCccchhhhhcccCCCCchhcchHHHHHHHHhhhcCCCCCEEEEEc
Q psy425 82 IFQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLG 161 (254)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~VLDiG 161 (254)
+|+. .+.|.+ ...+++.+ .+.++.+|||||
T Consensus 54 f~q~----------------------------------~~~~~~--------------~~~l~~~l--~~~~~~~VLDiG 83 (317)
T 1dl5_A 54 EYST----------------------------------SSQPSL--------------MALFMEWV--GLDKGMRVLEIG 83 (317)
T ss_dssp CEEE----------------------------------ECCHHH--------------HHHHHHHT--TCCTTCEEEEEC
T ss_pred ccee----------------------------------ccCHHH--------------HHHHHHhc--CCCCcCEEEEec
Confidence 0010 023445 67778877 788999999999
Q ss_pred CCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEEecCcCcCc
Q psy425 162 FGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 162 ~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~~~~~~~~~ 241 (254)
||+|.++..+++.++..++|+|+|+++++++.|++++..+ +..+++ +..+|+....+..++||+|++..+++++
T Consensus 84 cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----g~~~v~-~~~~d~~~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 84 GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL-----GIENVI-FVCGDGYYGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT-----TCCSEE-EEESCGGGCCGGGCCEEEEEECSBBSCC
T ss_pred CCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCCeE-EEECChhhccccCCCeEEEEEcCCHHHH
Confidence 9999999999998754578999999999999999999875 356799 9999998755555679999999999999
Q ss_pred hHHHHHHHH
Q psy425 242 PIEVSKLCR 250 (254)
Q Consensus 242 ~~~l~~~lr 250 (254)
++.+.+.|+
T Consensus 158 ~~~~~~~Lk 166 (317)
T 1dl5_A 158 PETWFTQLK 166 (317)
T ss_dssp CHHHHHHEE
T ss_pred HHHHHHhcC
Confidence 976665554
No 8
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.79 E-value=9e-19 Score=145.10 Aligned_cols=97 Identities=22% Similarity=0.314 Sum_probs=82.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++... + +++ +..+|+
T Consensus 59 ~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~-----~--~v~-~~~~d~ 125 (231)
T 1vbf_A 59 GIFMLDEL--DLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYY-----N--NIK-LILGDG 125 (231)
T ss_dssp HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTC-----S--SEE-EEESCG
T ss_pred HHHHHHhc--CCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhc-----C--CeE-EEECCc
Confidence 67777877 77889999999999999999999986 37999999999999999998763 2 899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHH
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLC 249 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~l 249 (254)
....+..++||+|++..+++++++.+.+.|
T Consensus 126 ~~~~~~~~~fD~v~~~~~~~~~~~~~~~~L 155 (231)
T 1vbf_A 126 TLGYEEEKPYDRVVVWATAPTLLCKPYEQL 155 (231)
T ss_dssp GGCCGGGCCEEEEEESSBBSSCCHHHHHTE
T ss_pred ccccccCCCccEEEECCcHHHHHHHHHHHc
Confidence 864444567999999999999987655544
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.64 E-value=1.8e-15 Score=128.17 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=82.6
Q ss_pred HHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC
Q psy425 145 QHLSDKLLPGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY 223 (254)
Q Consensus 145 ~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~ 223 (254)
..+...++++.+|||+|||+|..+..+++.+.. ..+|+|+|+|+.|++.|++++...+ ...+|+ ++++|+....
T Consensus 62 ~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~----~~~~v~-~~~~D~~~~~ 136 (261)
T 4gek_A 62 MLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK----APTPVD-VIEGDIRDIA 136 (261)
T ss_dssp HHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC----CSSCEE-EEESCTTTCC
T ss_pred HHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc----cCceEE-Eeeccccccc
Confidence 333345889999999999999999999998743 4589999999999999999988753 346899 9999998643
Q ss_pred cCCCCccEEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 224 KKNGPYDVIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 224 ~~~~~fD~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
. +.||+|+++.+++++++. +.+..+.|||
T Consensus 137 ~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~Lkp 170 (261)
T 4gek_A 137 I--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNP 170 (261)
T ss_dssp C--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred c--cccccceeeeeeeecCchhHhHHHHHHHHHcCC
Confidence 2 359999999999988753 4555566664
No 10
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.63 E-value=9.4e-15 Score=118.65 Aligned_cols=106 Identities=21% Similarity=0.238 Sum_probs=89.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+ .+.++.+|||+|||+|.++..+++.+ +..+|+++|+++++++.|++++..++ ..+++ ++.+|+
T Consensus 29 ~~~~l~~l--~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~-~~~~d~ 99 (204)
T 3e05_A 29 RAVTLSKL--RLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFV-----ARNVT-LVEAFA 99 (204)
T ss_dssp HHHHHHHT--TCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHT-----CTTEE-EEECCT
T ss_pred HHHHHHHc--CCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhC-----CCcEE-EEeCCh
Confidence 46667777 78899999999999999999999985 55689999999999999999998863 47899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
........+||+|+++.++......+.+..+.||+
T Consensus 100 ~~~~~~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkp 134 (204)
T 3e05_A 100 PEGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKS 134 (204)
T ss_dssp TTTCTTSCCCSEEEESCCTTCHHHHHHHHHHHCCT
T ss_pred hhhhhcCCCCCEEEECCCCcCHHHHHHHHHHhcCC
Confidence 76555446799999999888777777777787775
No 11
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.56 E-value=4.5e-14 Score=118.26 Aligned_cols=105 Identities=25% Similarity=0.176 Sum_probs=84.9
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++..+++..+. +|+|+|+++.+++.|++++...+ ...+++ +.++|+
T Consensus 25 ~~~l~~~~--~~~~~~~VLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~l~~a~~~~~~~~----~~~~v~-~~~~d~ 95 (256)
T 1nkv_A 25 YATLGRVL--RMKPGTRILDLGSGSGEMLCTWARDHGI--TGTGIDMSSLFTAQAKRRAEELG----VSERVH-FIHNDA 95 (256)
T ss_dssp HHHHHHHT--CCCTTCEEEEETCTTCHHHHHHHHHTCC--EEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEESCC
T ss_pred HHHHHHhc--CCCCCCEEEEECCCCCHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhcC----CCcceE-EEECCh
Confidence 66677776 6789999999999999999999988643 79999999999999999988753 235899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCch---HHHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIP---IEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~---~~l~~~lr~lk~ 254 (254)
..... .++||+|++..++++++ ..+.+..+.|||
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkp 132 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKP 132 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEE
T ss_pred HhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCC
Confidence 86554 56799999999987764 335555566553
No 12
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.56 E-value=9e-14 Score=113.33 Aligned_cols=102 Identities=19% Similarity=0.173 Sum_probs=82.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCC-CeeEEEEcC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY-KIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~-~v~~~~~~d 218 (254)
...+++.+ .+.++.+|||+|||+|.++..+++. + .+|+|+|+++++++.|++++..++ .. +++ ++.+|
T Consensus 44 ~~~~l~~l--~~~~~~~vLDlGcG~G~~~~~la~~-~--~~v~~vD~s~~~~~~a~~~~~~~g-----~~~~v~-~~~~d 112 (204)
T 3njr_A 44 RALTLAAL--APRRGELLWDIGGGSGSVSVEWCLA-G--GRAITIEPRADRIENIQKNIDTYG-----LSPRMR-AVQGT 112 (204)
T ss_dssp HHHHHHHH--CCCTTCEEEEETCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTT-----CTTTEE-EEESC
T ss_pred HHHHHHhc--CCCCCCEEEEecCCCCHHHHHHHHc-C--CEEEEEeCCHHHHHHHHHHHHHcC-----CCCCEE-EEeCc
Confidence 55667777 7888999999999999999999988 3 379999999999999999998863 44 899 99999
Q ss_pred CCCCCcCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 219 ARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 219 ~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
+.........||+|+++.++ ..+ .+.+..+.||+
T Consensus 113 ~~~~~~~~~~~D~v~~~~~~-~~~-~l~~~~~~Lkp 146 (204)
T 3njr_A 113 APAALADLPLPEAVFIGGGG-SQA-LYDRLWEWLAP 146 (204)
T ss_dssp TTGGGTTSCCCSEEEECSCC-CHH-HHHHHHHHSCT
T ss_pred hhhhcccCCCCCEEEECCcc-cHH-HHHHHHHhcCC
Confidence 98744444569999998865 233 56666677764
No 13
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.56 E-value=1.2e-14 Score=118.47 Aligned_cols=108 Identities=17% Similarity=0.125 Sum_probs=80.7
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCC-------CcccCCCeeE
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYP-------KLYKLYKIMD 213 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-------~~~~~~~v~~ 213 (254)
..+++.+ .+.++.+|||+|||+|..+..|++.+ . +|+|+|+|+.|++.|+++...... ......+++
T Consensus 12 ~~~~~~l--~~~~~~~vLD~GCG~G~~~~~la~~g-~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~- 85 (203)
T 1pjz_A 12 QQYWSSL--NVVPGARVLVPLCGKSQDMSWLSGQG-Y--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE- 85 (203)
T ss_dssp HHHHHHH--CCCTTCEEEETTTCCSHHHHHHHHHC-C--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE-
T ss_pred HHHHHhc--ccCCCCEEEEeCCCCcHhHHHHHHCC-C--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE-
Confidence 3445555 56789999999999999999999984 3 799999999999999987642000 000135799
Q ss_pred EEEcCCCCCCcCC-CCccEEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 214 VVEWDARKPYKKN-GPYDVIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 214 ~~~~d~~~~~~~~-~~fD~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
++++|+....... ++||+|++..++++++++ +.+..+.|||
T Consensus 86 ~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp 132 (203)
T 1pjz_A 86 IWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQ 132 (203)
T ss_dssp EEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS
T ss_pred EEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCC
Confidence 9999998755443 579999999999888753 4455566764
No 14
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.56 E-value=5.1e-14 Score=115.20 Aligned_cols=106 Identities=26% Similarity=0.377 Sum_probs=87.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||+|||+|.++..+++.+++..+|+|+|+++.+++.|++++... +..+++ +..+|+
T Consensus 26 ~~~~~~~~--~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~-~~~~d~ 97 (219)
T 3dh0_A 26 PEKVLKEF--GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL-----GLKNVE-VLKSEE 97 (219)
T ss_dssp HHHHHHHH--TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH-----TCTTEE-EEECBT
T ss_pred HHHHHHHh--CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-----CCCcEE-EEeccc
Confidence 56677777 7788999999999999999999999866678999999999999999999875 345899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
.......++||+|+++.+++++++ .+.+..+.||
T Consensus 98 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk 134 (219)
T 3dh0_A 98 NKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAK 134 (219)
T ss_dssp TBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEE
T ss_pred ccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhC
Confidence 865555667999999999988753 3445555555
No 15
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.56 E-value=3.7e-14 Score=116.11 Aligned_cols=111 Identities=15% Similarity=0.131 Sum_probs=83.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++..++-......+++ +..+|+
T Consensus 18 ~~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d~ 93 (217)
T 3jwh_A 18 MNGVVAAL--KQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQ-LIQGAL 93 (217)
T ss_dssp HHHHHHHH--HHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEE-EEECCT
T ss_pred HHHHHHHH--HhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceE-EEeCCc
Confidence 56666666 45678899999999999999999875 345899999999999999999876420000112799 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
.......++||+|++..++++++++ +.+..+.||+
T Consensus 94 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 133 (217)
T 3jwh_A 94 TYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQP 133 (217)
T ss_dssp TSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCC
T ss_pred ccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCC
Confidence 7544445679999999999988754 3444455553
No 16
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.54 E-value=6.4e-14 Score=114.79 Aligned_cols=111 Identities=18% Similarity=0.174 Sum_probs=83.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++..++-......+++ +..+|+
T Consensus 18 ~~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d~ 93 (219)
T 3jwg_A 18 LGTVVAVL--KSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRIS-LFQSSL 93 (219)
T ss_dssp HHHHHHHH--HHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEE-EEECCS
T ss_pred HHHHHHHH--hhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceE-EEeCcc
Confidence 55566666 44678899999999999999999875 345899999999999999999876420000112799 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
.......++||+|++..++++++++ +.+..+.||+
T Consensus 94 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkp 133 (219)
T 3jwg_A 94 VYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRP 133 (219)
T ss_dssp SSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCC
T ss_pred cccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCC
Confidence 7555455679999999999999854 3344455553
No 17
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.53 E-value=8.5e-14 Score=119.84 Aligned_cols=103 Identities=17% Similarity=0.080 Sum_probs=84.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++..+++..+ .+|+|+|+++++++.|++++...+ ...+++ +..+|+
T Consensus 61 ~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~ 131 (302)
T 3hem_A 61 RKLALDKL--NLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVD----SPRRKE-VRIQGW 131 (302)
T ss_dssp HHHHHHTT--CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSC----CSSCEE-EEECCG
T ss_pred HHHHHHHc--CCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC----CCCceE-EEECCH
Confidence 34455555 577899999999999999999999865 489999999999999999998853 344899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCc------------hHHHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHI------------PIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~------------~~~l~~~lr~lk~ 254 (254)
... .++||+|++..+++++ +..+.+..+.|||
T Consensus 132 ~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkp 175 (302)
T 3hem_A 132 EEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPD 175 (302)
T ss_dssp GGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCT
T ss_pred HHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCC
Confidence 764 5679999999999998 3456666677765
No 18
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.53 E-value=6.8e-14 Score=117.67 Aligned_cols=104 Identities=22% Similarity=0.247 Sum_probs=84.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++.+. +|+|+|+++++++.|++++... +..+++ +..+|+
T Consensus 26 ~~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~-----~~~~v~-~~~~d~ 94 (260)
T 1vl5_A 26 LAKLMQIA--ALKGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGN-----GHQQVE-YVQGDA 94 (260)
T ss_dssp HHHHHHHH--TCCSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHT-----TCCSEE-EEECCC
T ss_pred HHHHHHHh--CCCCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhc-----CCCceE-EEEecH
Confidence 66777777 677899999999999999999988753 7999999999999999998875 346899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk~ 254 (254)
.....++++||+|++..+++++++ .+.+..+.|||
T Consensus 95 ~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkp 132 (260)
T 1vl5_A 95 EQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKK 132 (260)
T ss_dssp -CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred HhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCC
Confidence 865445567999999999988764 35555566653
No 19
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.52 E-value=1.3e-13 Score=116.56 Aligned_cols=105 Identities=17% Similarity=0.204 Sum_probs=83.2
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++..+++..+ .+|+|+|+++.+++.|++++...+ ...+++ +..+|+
T Consensus 50 ~~~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----~~~~~~-~~~~d~ 120 (273)
T 3bus_A 50 TDEMIALL--DVRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAAG----LANRVT-FSYADA 120 (273)
T ss_dssp HHHHHHHS--CCCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEECCT
T ss_pred HHHHHHhc--CCCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhcC----CCcceE-EEECcc
Confidence 44555555 567899999999999999999998754 489999999999999999988753 345799 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
.......++||+|++..+++++++ .+.+..+.||
T Consensus 121 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~ 157 (273)
T 3bus_A 121 MDLPFEDASFDAVWALESLHHMPDRGRALREMARVLR 157 (273)
T ss_dssp TSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEE
T ss_pred ccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcC
Confidence 865555567999999999988864 2444445554
No 20
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.52 E-value=1.3e-13 Score=115.50 Aligned_cols=106 Identities=17% Similarity=0.244 Sum_probs=82.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+. .+.++.+|||+|||+|..+..+++.++. +|+|+|+++.+++.|++++...+ ...+++ ++++|+
T Consensus 34 ~~~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~-~~~~d~ 105 (257)
T 3f4k_A 34 TRKAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKAN----CADRVK-GITGSM 105 (257)
T ss_dssp HHHHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEECCT
T ss_pred HHHHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcC----CCCceE-EEECCh
Confidence 444444442 5678899999999999999999999743 89999999999999999998864 334599 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCch--HHHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIP--IEVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~--~~l~~~lr~lk 253 (254)
.......++||+|++..++++++ ..+.+..+.||
T Consensus 106 ~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~ 141 (257)
T 3f4k_A 106 DNLPFQNEELDLIWSEGAIYNIGFERGMNEWSKYLK 141 (257)
T ss_dssp TSCSSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEE
T ss_pred hhCCCCCCCEEEEEecChHhhcCHHHHHHHHHHHcC
Confidence 76554567799999999998873 23444445554
No 21
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.51 E-value=8.1e-14 Score=115.98 Aligned_cols=104 Identities=15% Similarity=0.219 Sum_probs=85.1
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||+|||+|.++..+++.+ . +|+|+|+++.+++.+++++... +..+++ +..+|+
T Consensus 10 ~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~v~-~~~~d~ 78 (239)
T 1xxl_A 10 LGLMIKTA--ECRAEHRVLDIGAGAGHTALAFSPYV-Q--ECIGVDATKEMVEVASSFAQEK-----GVENVR-FQQGTA 78 (239)
T ss_dssp HHHHHHHH--TCCTTCEEEEESCTTSHHHHHHGGGS-S--EEEEEESCHHHHHHHHHHHHHH-----TCCSEE-EEECBT
T ss_pred cchHHHHh--CcCCCCEEEEEccCcCHHHHHHHHhC-C--EEEEEECCHHHHHHHHHHHHHc-----CCCCeE-EEeccc
Confidence 56677888 88899999999999999999998875 3 7999999999999999998875 356899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk~ 254 (254)
.......++||+|++..+++++++ .+.+..+.||+
T Consensus 79 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp 116 (239)
T 1xxl_A 79 ESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQ 116 (239)
T ss_dssp TBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred ccCCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCC
Confidence 865445567999999999977753 35555566553
No 22
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.51 E-value=1.3e-13 Score=110.09 Aligned_cols=87 Identities=16% Similarity=0.082 Sum_probs=68.7
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
......+...+.++.+|||+|||+|.++..+++. .++|+|+|+++++++.|++++..++ ..+++ +++.+..
T Consensus 10 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~v~-~~~~~~~ 80 (185)
T 3mti_A 10 HMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLG-----IENTE-LILDGHE 80 (185)
T ss_dssp HHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHT-----CCCEE-EEESCGG
T ss_pred HHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcC-----CCcEE-EEeCcHH
Confidence 3344444446788999999999999999999987 2479999999999999999998863 47899 9997765
Q ss_pred CCC-cCCCCccEEEecC
Q psy425 221 KPY-KKNGPYDVIHFGS 236 (254)
Q Consensus 221 ~~~-~~~~~fD~I~~~~ 236 (254)
... ...++||+|+++.
T Consensus 81 ~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 81 NLDHYVREPIRAAIFNL 97 (185)
T ss_dssp GGGGTCCSCEEEEEEEE
T ss_pred HHHhhccCCcCEEEEeC
Confidence 421 2245799999883
No 23
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.51 E-value=9.8e-14 Score=111.83 Aligned_cols=84 Identities=20% Similarity=0.253 Sum_probs=70.7
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-cCCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-KKNGP 228 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-~~~~~ 228 (254)
.+.++.+|||+|||+|.++..+++..++.++|+|+|+++++++.|++++..++ ...+++ ++++|+.... ...++
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~~~~~ 93 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN----LIDRVT-LIKDGHQNMDKYIDCP 93 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT----CGGGEE-EECSCGGGGGGTCCSC
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCeE-EEECCHHHHhhhccCC
Confidence 67889999999999999999999997666799999999999999999998853 235899 9999987542 23467
Q ss_pred ccEEEecCcC
Q psy425 229 YDVIHFGSGV 238 (254)
Q Consensus 229 fD~I~~~~~~ 238 (254)
||+|+++..+
T Consensus 94 fD~v~~~~~~ 103 (197)
T 3eey_A 94 VKAVMFNLGY 103 (197)
T ss_dssp EEEEEEEESB
T ss_pred ceEEEEcCCc
Confidence 9999998755
No 24
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.51 E-value=2.1e-13 Score=116.77 Aligned_cols=95 Identities=13% Similarity=0.090 Sum_probs=77.5
Q ss_pred cCCCCCEEEEEcCCCChHHH-HHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSC-CMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGP 228 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~-~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~ 228 (254)
.++++.+|||||||+|.++. .+++.. .++|+|+|+++++++.|++++...+ ..+++ ++++|+... + +++
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~--ga~V~gIDis~~~l~~Ar~~~~~~g-----l~~v~-~v~gDa~~l-~-d~~ 188 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVY--GMRVNVVEIEPDIAELSRKVIEGLG-----VDGVN-VITGDETVI-D-GLE 188 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTT--CCEEEEEESSHHHHHHHHHHHHHHT-----CCSEE-EEESCGGGG-G-GCC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHhcC-----CCCeE-EEECchhhC-C-CCC
Confidence 78999999999999998764 455443 4589999999999999999998864 37899 999999863 3 567
Q ss_pred ccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 229 YDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 229 fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
||+|++.+........+.+..+.|||
T Consensus 189 FDvV~~~a~~~d~~~~l~el~r~LkP 214 (298)
T 3fpf_A 189 FDVLMVAALAEPKRRVFRNIHRYVDT 214 (298)
T ss_dssp CSEEEECTTCSCHHHHHHHHHHHCCT
T ss_pred cCEEEECCCccCHHHHHHHHHHHcCC
Confidence 99999987766556677777788875
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.50 E-value=1.7e-13 Score=111.55 Aligned_cols=104 Identities=16% Similarity=0.209 Sum_probs=81.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++ +|||+|||+|.++..+++. +..+|+|+|+++.+++.|++++...+ ...+++ +.++|+
T Consensus 33 ~~~~~~~~--~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~----~~~~~~-~~~~d~ 102 (219)
T 3dlc_A 33 AENIINRF--GITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADAN----LNDRIQ-IVQGDV 102 (219)
T ss_dssp HHHHHHHH--CCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEECBT
T ss_pred HHHHHHhc--CCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhcc----ccCceE-EEEcCH
Confidence 45555655 45555 9999999999999999988 33589999999999999999998853 345899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
.......++||+|+++.+++++++ .+.+..+.||
T Consensus 103 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~ 139 (219)
T 3dlc_A 103 HNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILK 139 (219)
T ss_dssp TBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE
T ss_pred HHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCC
Confidence 875555667999999999987743 3455555555
No 26
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.50 E-value=3e-14 Score=120.42 Aligned_cols=96 Identities=20% Similarity=0.164 Sum_probs=76.1
Q ss_pred HHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC
Q psy425 144 LQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY 223 (254)
Q Consensus 144 l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~ 223 (254)
++.+......+.+|||||||+|..+..|++.+. +|+|+|+|+.|++.|++ ..+++ ++++|++...
T Consensus 30 ~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~-----------~~~v~-~~~~~~e~~~ 94 (257)
T 4hg2_A 30 FRWLGEVAPARGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALR-----------HPRVT-YAVAPAEDTG 94 (257)
T ss_dssp HHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCC-----------CTTEE-EEECCTTCCC
T ss_pred HHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhh-----------cCCce-eehhhhhhhc
Confidence 333433445678999999999999999998753 69999999999987643 24799 9999998766
Q ss_pred cCCCCccEEEecCcCcCchH--HHHHHHHhhcC
Q psy425 224 KKNGPYDVIHFGSGVKHIPI--EVSKLCRSQKK 254 (254)
Q Consensus 224 ~~~~~fD~I~~~~~~~~~~~--~l~~~lr~lk~ 254 (254)
.++++||+|++..++++++. .+.+..|+|||
T Consensus 95 ~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkp 127 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWFDLDRFWAELRRVARP 127 (257)
T ss_dssp CCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEE
T ss_pred ccCCcccEEEEeeehhHhhHHHHHHHHHHHcCC
Confidence 66778999999999987754 46777788775
No 27
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.50 E-value=1.9e-13 Score=115.49 Aligned_cols=106 Identities=18% Similarity=0.233 Sum_probs=82.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+. .+.++.+|||||||+|.++..+++. +.++|+|+|+++.+++.|++++...+ ..++++ ++.+|+
T Consensus 34 ~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~ 105 (267)
T 3kkz_A 34 TLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSG----LQNRVT-GIVGSM 105 (267)
T ss_dssp HHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEECCT
T ss_pred HHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcC----CCcCcE-EEEcCh
Confidence 444555552 4678999999999999999999987 33589999999999999999988753 335799 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH--HHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI--EVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~--~l~~~lr~lk 253 (254)
.......++||+|++..+++++.. .+.+..+.||
T Consensus 106 ~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~Lk 141 (267)
T 3kkz_A 106 DDLPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLK 141 (267)
T ss_dssp TSCCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEE
T ss_pred hhCCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcC
Confidence 865545677999999999987732 2444445554
No 28
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.50 E-value=1.3e-13 Score=114.52 Aligned_cols=97 Identities=20% Similarity=0.241 Sum_probs=77.7
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC---cCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY---KKN 226 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~---~~~ 226 (254)
+++||++|||+|||+|+++..+|+..++.|+|+|+|++++|++.+++++.+ ..|+. .+.+|...+. ...
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-------~~ni~-~V~~d~~~p~~~~~~~ 145 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-------RRNIF-PILGDARFPEKYRHLV 145 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-------CTTEE-EEESCTTCGGGGTTTC
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-------hcCee-EEEEeccCcccccccc
Confidence 578999999999999999999999999999999999999999999988765 35898 9999987432 234
Q ss_pred CCccEEEecCcCcCchH-HHHHHHHhhcC
Q psy425 227 GPYDVIHFGSGVKHIPI-EVSKLCRSQKK 254 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~~~-~l~~~lr~lk~ 254 (254)
..+|+|++....+.-+. .+.+..+.|||
T Consensus 146 ~~vDvVf~d~~~~~~~~~~l~~~~r~LKp 174 (233)
T 4df3_A 146 EGVDGLYADVAQPEQAAIVVRNARFFLRD 174 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEE
T ss_pred ceEEEEEEeccCChhHHHHHHHHHHhccC
Confidence 56999998766554333 35555677764
No 29
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.49 E-value=6e-14 Score=115.90 Aligned_cols=110 Identities=8% Similarity=0.062 Sum_probs=85.2
Q ss_pred HHHHHHHhhhcC--CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccC-CCeeEEEE
Q psy425 140 QAACLQHLSDKL--LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKL-YKIMDVVE 216 (254)
Q Consensus 140 ~~~~l~~l~~~~--~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~-~~v~~~~~ 216 (254)
...++..+.... +++.+|||||||+|+.+..+++..++.++|+++|+++++++.|+++++..+ .. ++++ +++
T Consensus 41 ~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~~i~-~~~ 115 (221)
T 3dr5_A 41 TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG----YSPSRVR-FLL 115 (221)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT----CCGGGEE-EEC
T ss_pred HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcCcEE-EEE
Confidence 344444443222 234599999999999999999987667899999999999999999998864 22 4799 999
Q ss_pred cCCCCCCcC--CCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 217 WDARKPYKK--NGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 217 ~d~~~~~~~--~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
+|+.+..+. .++||+|++.....+.+..+.+.++.||+
T Consensus 116 gda~~~l~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkp 155 (221)
T 3dr5_A 116 SRPLDVMSRLANDSYQLVFGQVSPMDLKALVDAAWPLLRR 155 (221)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCTTTHHHHHHHHHHHEEE
T ss_pred cCHHHHHHHhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCC
Confidence 998743322 46799999998888777777777787764
No 30
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.49 E-value=1.8e-13 Score=115.80 Aligned_cols=108 Identities=19% Similarity=0.238 Sum_probs=83.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHH------HHHHHHHHHHhhCCCcccCCCeeE
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQ------LINLFMTKLKISYPKLYKLYKIMD 213 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~------~l~~a~~~~~~~~~~~~~~~~v~~ 213 (254)
...+++.+ .+.++.+|||||||+|.++..+++.+++..+|+|+|+++. +++.|++++...+ ...+++
T Consensus 32 ~~~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~----~~~~v~- 104 (275)
T 3bkx_A 32 RLAIAEAW--QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP----LGDRLT- 104 (275)
T ss_dssp HHHHHHHH--TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST----TGGGEE-
T ss_pred HHHHHHHc--CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC----CCCceE-
Confidence 45566666 6789999999999999999999999766568999999997 9999999987743 235799
Q ss_pred EEEcC-CC--CCCcCCCCccEEEecCcCcCchH--HHHHHHHhhcC
Q psy425 214 VVEWD-AR--KPYKKNGPYDVIHFGSGVKHIPI--EVSKLCRSQKK 254 (254)
Q Consensus 214 ~~~~d-~~--~~~~~~~~fD~I~~~~~~~~~~~--~l~~~lr~lk~ 254 (254)
+..+| .. ......++||+|++..+++++++ .+.+.++.++|
T Consensus 105 ~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~ 150 (275)
T 3bkx_A 105 VHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAA 150 (275)
T ss_dssp EECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTT
T ss_pred EEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhC
Confidence 99998 32 22223567999999999987754 35566666553
No 31
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.49 E-value=2.7e-13 Score=117.34 Aligned_cols=96 Identities=14% Similarity=0.018 Sum_probs=78.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++++++.|++++..++ ...+++ +..+|+.......++||
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~~~~fD 187 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELR----IDDHVR-SRVCNMLDTPFDKGAVT 187 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEECCTTSCCCCTTCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcC----CCCceE-EEECChhcCCCCCCCEe
Confidence 67899999999999999999999853 379999999999999999998864 335899 99999986544556799
Q ss_pred EEEecCcCcCch--HHHHHHHHhhc
Q psy425 231 VIHFGSGVKHIP--IEVSKLCRSQK 253 (254)
Q Consensus 231 ~I~~~~~~~~~~--~~l~~~lr~lk 253 (254)
+|++..++++++ ..+.+..+.||
T Consensus 188 ~V~~~~~l~~~~~~~~l~~~~~~Lk 212 (312)
T 3vc1_A 188 ASWNNESTMYVDLHDLFSEHSRFLK 212 (312)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHEE
T ss_pred EEEECCchhhCCHHHHHHHHHHHcC
Confidence 999999998774 23444455555
No 32
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.48 E-value=4.3e-13 Score=111.45 Aligned_cols=107 Identities=20% Similarity=0.172 Sum_probs=78.9
Q ss_pred HHHHHHHhh-hcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLS-DKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~-~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d 218 (254)
.+.++..+. -.+++|.+|||+|||+|..+..+++..++.|+|+|+|+++.+++...+.... ..|+. ++.+|
T Consensus 62 a~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-------r~nv~-~i~~D 133 (232)
T 3id6_C 62 AGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-------RPNIF-PLLAD 133 (232)
T ss_dssp HHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-------CTTEE-EEECC
T ss_pred HHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-------cCCeE-EEEcc
Confidence 344444441 1377999999999999999999999988889999999999998666555444 24899 99999
Q ss_pred CCCCCc---CCCCccEEEecCcCcCchHHHHHHHH-hhcC
Q psy425 219 ARKPYK---KNGPYDVIHFGSGVKHIPIEVSKLCR-SQKK 254 (254)
Q Consensus 219 ~~~~~~---~~~~fD~I~~~~~~~~~~~~l~~~lr-~lk~ 254 (254)
+..+.. ..++||+|+++.+.+..+..+.+..+ .||+
T Consensus 134 a~~~~~~~~~~~~~D~I~~d~a~~~~~~il~~~~~~~Lkp 173 (232)
T 3id6_C 134 ARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKV 173 (232)
T ss_dssp TTCGGGTTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEE
T ss_pred cccchhhhccccceEEEEecCCChhHHHHHHHHHHHhCCC
Confidence 975321 23579999999887655555554444 5553
No 33
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.47 E-value=1.2e-13 Score=112.91 Aligned_cols=92 Identities=15% Similarity=0.121 Sum_probs=75.6
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|++++... .+++ +.++|+.... ..++|
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~-------~~~~-~~~~d~~~~~-~~~~f 115 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPHCK---RLTVIDVMPRAIGRACQRTKRW-------SHIS-WAATDILQFS-TAELF 115 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGGEE---EEEEEESCHHHHHHHHHHTTTC-------SSEE-EEECCTTTCC-CSCCE
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcccC-------CCeE-EEEcchhhCC-CCCCc
Confidence 556788999999999999999988852 7999999999999999997652 3899 9999998755 45679
Q ss_pred cEEEecCcCcCchHH------HHHHHHhhc
Q psy425 230 DVIHFGSGVKHIPIE------VSKLCRSQK 253 (254)
Q Consensus 230 D~I~~~~~~~~~~~~------l~~~lr~lk 253 (254)
|+|+++.+++++++. +.+..+.||
T Consensus 116 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~ 145 (216)
T 3ofk_A 116 DLIVVAEVLYYLEDMTQMRTAIDNMVKMLA 145 (216)
T ss_dssp EEEEEESCGGGSSSHHHHHHHHHHHHHTEE
T ss_pred cEEEEccHHHhCCCHHHHHHHHHHHHHHcC
Confidence 999999999988742 444445554
No 34
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.47 E-value=5.7e-14 Score=117.57 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=81.4
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC----
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK---- 225 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~---- 225 (254)
...++.+|||||||+|+.+..+++..++.++|+++|+++++++.|++++...+ ..++++ ++.+|+.+..+.
T Consensus 57 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~-~~~gda~~~l~~~~~~ 131 (242)
T 3r3h_A 57 RLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK----QEHKIK-LRLGPALDTLHSLLNE 131 (242)
T ss_dssp HHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT----CTTTEE-EEESCHHHHHHHHHHH
T ss_pred hhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEEcCHHHHHHHHhhc
Confidence 34467899999999999999999987656799999999999999999998864 345899 999998743322
Q ss_pred --CCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 226 --NGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 226 --~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
.++||+|++.......+..+.+.++.||+
T Consensus 132 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkp 162 (242)
T 3r3h_A 132 GGEHQFDFIFIDADKTNYLNYYELALKLVTP 162 (242)
T ss_dssp HCSSCEEEEEEESCGGGHHHHHHHHHHHEEE
T ss_pred cCCCCEeEEEEcCChHHhHHHHHHHHHhcCC
Confidence 36799999998876667767777777764
No 35
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.47 E-value=1.8e-13 Score=114.85 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=80.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.|+++... . .+++ +.++|+
T Consensus 44 ~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~------~-~~~~-~~~~d~ 111 (266)
T 3ujc_A 44 TKKILSDI--ELNENSKVLDIGSGLGGGCMYINEKYG--AHTHGIDICSNIVNMANERVSG------N-NKII-FEANDI 111 (266)
T ss_dssp HHHHTTTC--CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHTCCS------C-TTEE-EEECCT
T ss_pred HHHHHHhc--CCCCCCEEEEECCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhhc------C-CCeE-EEECcc
Confidence 34445555 567889999999999999999999863 3899999999999999988654 1 6899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCch--H---HHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIP--I---EVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~--~---~l~~~lr~lk 253 (254)
.....+.++||+|++..+++|++ + .+.+..+.||
T Consensus 112 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~ 150 (266)
T 3ujc_A 112 LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLK 150 (266)
T ss_dssp TTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred ccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcC
Confidence 87555567899999999999983 3 2444445554
No 36
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.47 E-value=2.9e-13 Score=113.54 Aligned_cols=109 Identities=17% Similarity=0.216 Sum_probs=85.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+. ...++.+|||||||+|+.+..+++..++.++|+++|+++++++.|++++...+ ..++++ ++.+|+
T Consensus 51 ~~~~l~~l~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g----~~~~v~-~~~~d~ 124 (248)
T 3tfw_A 51 QGQFLALLV-RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG----VDQRVT-LREGPA 124 (248)
T ss_dssp HHHHHHHHH-HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT----CTTTEE-EEESCH
T ss_pred HHHHHHHHH-hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEEcCH
Confidence 344444443 44578999999999999999999987546799999999999999999998864 335899 999998
Q ss_pred CCCC---cCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPY---KKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~---~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
.+.. ...++||+|++.......+..+.+..+.||+
T Consensus 125 ~~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkp 162 (248)
T 3tfw_A 125 LQSLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRP 162 (248)
T ss_dssp HHHHHTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCT
T ss_pred HHHHHhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCC
Confidence 6422 1234799999998877777777777888875
No 37
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.47 E-value=5.1e-13 Score=113.92 Aligned_cols=102 Identities=21% Similarity=0.106 Sum_probs=80.4
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+++.+ .+.++.+|||||||+|.++..+++..+. +|+|+|+++++++.|++++...+ ...+++ +..+|+.
T Consensus 54 ~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~~~----~~~~~~-~~~~d~~ 124 (287)
T 1kpg_A 54 DLALGKL--GLQPGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTLSKNQANHVQQLVANSE----NLRSKR-VLLAGWE 124 (287)
T ss_dssp HHHHTTT--TCCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTCC----CCSCEE-EEESCGG
T ss_pred HHHHHHc--CCCCcCEEEEECCcccHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC----CCCCeE-EEECChh
Confidence 3344444 5678899999999999999999976654 89999999999999999988753 345899 9999997
Q ss_pred CCCcCCCCccEEEecCcCcCch-----HHHHHHHHhhcC
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIP-----IEVSKLCRSQKK 254 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~-----~~l~~~lr~lk~ 254 (254)
.. + ++||+|++..+++|++ ..+.+..+.|||
T Consensus 125 ~~-~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 160 (287)
T 1kpg_A 125 QF-D--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPA 160 (287)
T ss_dssp GC-C--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCT
T ss_pred hC-C--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCC
Confidence 53 2 6799999999998883 335555677764
No 38
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.46 E-value=6.7e-13 Score=113.72 Aligned_cols=98 Identities=20% Similarity=0.097 Sum_probs=79.9
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.++.+|||||||+|..+..+++..+. +|+|+|+++.+++.|++++...+ ...+++ +..+|+......+++|
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~----~~~~~~-~~~~d~~~~~~~~~~f 151 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV--SIDCLNIAPVQNKRNEEYNNQAG----LADNIT-VKYGSFLEIPCEDNSY 151 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHHHT----CTTTEE-EEECCTTSCSSCTTCE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcC----CCcceE-EEEcCcccCCCCCCCE
Confidence 4578899999999999999999988643 89999999999999999987753 345799 9999998755556679
Q ss_pred cEEEecCcCcCchH---HHHHHHHhhcC
Q psy425 230 DVIHFGSGVKHIPI---EVSKLCRSQKK 254 (254)
Q Consensus 230 D~I~~~~~~~~~~~---~l~~~lr~lk~ 254 (254)
|+|++..+++|+++ .+.+..+.|||
T Consensus 152 D~v~~~~~l~~~~~~~~~l~~~~~~Lkp 179 (297)
T 2o57_A 152 DFIWSQDAFLHSPDKLKVFQECARVLKP 179 (297)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred eEEEecchhhhcCCHHHHHHHHHHHcCC
Confidence 99999999988764 35555566653
No 39
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.46 E-value=2.4e-13 Score=112.88 Aligned_cols=99 Identities=18% Similarity=0.241 Sum_probs=81.6
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc--CCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK--KNG 227 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~--~~~ 227 (254)
...++.+|||||||+|+.+..+++.. +.++|+++|+++++++.|++++...+ ..++++ ++.+|+.+..+ ..+
T Consensus 68 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~~~~~ 141 (232)
T 3ntv_A 68 RMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYH----FENQVR-IIEGNALEQFENVNDK 141 (232)
T ss_dssp HHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTT----CTTTEE-EEESCGGGCHHHHTTS
T ss_pred hhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEECCHHHHHHhhccC
Confidence 45578999999999999999999854 45799999999999999999998863 235899 99999976443 146
Q ss_pred CccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 228 PYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 228 ~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
+||+|++.......+..+.+..+.||+
T Consensus 142 ~fD~V~~~~~~~~~~~~l~~~~~~Lkp 168 (232)
T 3ntv_A 142 VYDMIFIDAAKAQSKKFFEIYTPLLKH 168 (232)
T ss_dssp CEEEEEEETTSSSHHHHHHHHGGGEEE
T ss_pred CccEEEEcCcHHHHHHHHHHHHHhcCC
Confidence 799999998888888777777777764
No 40
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.46 E-value=2.1e-13 Score=114.91 Aligned_cols=100 Identities=16% Similarity=0.030 Sum_probs=73.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHh---------hCC-Cc--ccCCCeeEEEEcC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKI---------SYP-KL--YKLYKIMDVVEWD 218 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~---------~~~-~~--~~~~~v~~~~~~d 218 (254)
..++.+|||+|||+|..+..|++.+ . +|+|||+|+.+++.|+++... .+. .. ....+++ +.++|
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~G-~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~D 141 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADRG-H--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSIS-LYCCS 141 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHTT-C--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEE-EEESC
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHCC-C--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceE-EEECc
Confidence 4578999999999999999999884 3 699999999999999876531 000 00 0125799 99999
Q ss_pred CCCCCcCC-CCccEEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 219 ARKPYKKN-GPYDVIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 219 ~~~~~~~~-~~fD~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
+....... ++||+|++.+++.++++. +.+..+.|||
T Consensus 142 ~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lkp 183 (252)
T 2gb4_A 142 IFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRK 183 (252)
T ss_dssp TTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEE
T ss_pred cccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCC
Confidence 98754442 679999999999877643 4444566653
No 41
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.46 E-value=1.4e-13 Score=113.15 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=85.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+. ...++.+|||||||+|..+..+++..++.++|+++|+++++++.|++++...+ ...+++ ++++|+
T Consensus 46 ~~~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~-~~~~d~ 119 (223)
T 3duw_A 46 QGKFLQLLV-QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN----LNDRVE-VRTGLA 119 (223)
T ss_dssp HHHHHHHHH-HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEESCH
T ss_pred HHHHHHHHH-HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEEcCH
Confidence 344444443 44578999999999999999999987546799999999999999999998864 234699 999998
Q ss_pred CCCCcC-----CCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYKK-----NGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~-----~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
....+. .++||+|++.......+..+.+..+.||+
T Consensus 120 ~~~~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~p 159 (223)
T 3duw_A 120 LDSLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRP 159 (223)
T ss_dssp HHHHHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCT
T ss_pred HHHHHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCC
Confidence 643221 15699999998877777777777788775
No 42
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.46 E-value=3.1e-13 Score=114.54 Aligned_cols=97 Identities=18% Similarity=0.247 Sum_probs=80.0
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++... +..+++ +..+|+.......++|
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~-~~~~d~~~~~~~~~~f 106 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKN-----GIKNVK-FLQANIFSLPFEDSSF 106 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHT-----TCCSEE-EEECCGGGCCSCTTCE
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHc-----CCCCcE-EEEcccccCCCCCCCe
Confidence 45789999999999999999999985 4568999999999999999999875 356899 9999998655556789
Q ss_pred cEEEecCcCcCchH---HHHHHHHhhc
Q psy425 230 DVIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 230 D~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
|+|++..+++++++ .+.+..+.||
T Consensus 107 D~v~~~~~l~~~~~~~~~l~~~~~~L~ 133 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSPEEALKSLKKVLK 133 (276)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEE
T ss_pred eEEEEechhhhcCCHHHHHHHHHHHcC
Confidence 99999999988764 2444445555
No 43
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.46 E-value=2.2e-13 Score=112.78 Aligned_cols=86 Identities=14% Similarity=0.105 Sum_probs=71.2
Q ss_pred hhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCC
Q psy425 147 LSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKN 226 (254)
Q Consensus 147 l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~ 226 (254)
+...++++.+|||||||+|++++.+++.+ +..+|+++|+++.+++.|++|++.++ ..++++ +..+|+.....+.
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~g----l~~~I~-~~~gD~l~~~~~~ 88 (230)
T 3lec_A 15 VANYVPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHG----LTSKID-VRLANGLSAFEEA 88 (230)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEE-EEECSGGGGCCGG
T ss_pred HHHhCCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEECchhhccccc
Confidence 33467789999999999999999999884 45689999999999999999999875 345799 9999998766554
Q ss_pred CCccEEEecCcC
Q psy425 227 GPYDVIHFGSGV 238 (254)
Q Consensus 227 ~~fD~I~~~~~~ 238 (254)
.+||+|++.+.-
T Consensus 89 ~~~D~IviaGmG 100 (230)
T 3lec_A 89 DNIDTITICGMG 100 (230)
T ss_dssp GCCCEEEEEEEC
T ss_pred cccCEEEEeCCc
Confidence 469998866543
No 44
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.46 E-value=3.4e-13 Score=112.25 Aligned_cols=100 Identities=16% Similarity=0.206 Sum_probs=80.1
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC----
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK---- 225 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~---- 225 (254)
...++.+|||||||+|+.+..+++..++.++|+++|+++++++.|++++...+ ...+++ +..+|+....+.
T Consensus 57 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~v~-~~~~d~~~~~~~~~~~ 131 (239)
T 2hnk_A 57 KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG----LENKIF-LKLGSALETLQVLIDS 131 (239)
T ss_dssp HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT----CGGGEE-EEESCHHHHHHHHHHC
T ss_pred HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCEE-EEECCHHHHHHHHHhh
Confidence 45578899999999999999999997545689999999999999999998753 223599 999998642210
Q ss_pred ------------C-CCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 226 ------------N-GPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 226 ------------~-~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
. ++||+|++.....+.+..+.+..+.||+
T Consensus 132 ~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~p 173 (239)
T 2hnk_A 132 KSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKP 173 (239)
T ss_dssp SSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEE
T ss_pred cccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCC
Confidence 2 6799999998888788777777777764
No 45
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.46 E-value=2.2e-13 Score=112.55 Aligned_cols=85 Identities=13% Similarity=0.098 Sum_probs=70.0
Q ss_pred hhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCC
Q psy425 147 LSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKN 226 (254)
Q Consensus 147 l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~ 226 (254)
+...++++.+|||||||+|++++.+++.+ +.++|+++|+++.+++.|++|++.++ ..++++ +..+|+....+..
T Consensus 9 l~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~g----l~~~i~-~~~~d~l~~l~~~ 82 (225)
T 3kr9_A 9 VASFVSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHG----LKEKIQ-VRLANGLAAFEET 82 (225)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEE-EEECSGGGGCCGG
T ss_pred HHHhCCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEE-EEECchhhhcccC
Confidence 33357789999999999999999999874 55689999999999999999999975 345799 9999997655543
Q ss_pred CCccEEEecCc
Q psy425 227 GPYDVIHFGSG 237 (254)
Q Consensus 227 ~~fD~I~~~~~ 237 (254)
.+||+|++.++
T Consensus 83 ~~~D~IviaG~ 93 (225)
T 3kr9_A 83 DQVSVITIAGM 93 (225)
T ss_dssp GCCCEEEEEEE
T ss_pred cCCCEEEEcCC
Confidence 36999887654
No 46
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.45 E-value=5e-13 Score=110.46 Aligned_cols=93 Identities=20% Similarity=0.293 Sum_probs=77.0
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
..++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++... .+++ ++.+|+...... ++||
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~-~~~~d~~~~~~~-~~fD 111 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGN-------LKVK-YIEADYSKYDFE-EKYD 111 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSC-------TTEE-EEESCTTTCCCC-SCEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccC-------CCEE-EEeCchhccCCC-CCce
Confidence 5678999999999999999999986 4568999999999999999997652 3899 999999865544 6799
Q ss_pred EEEecCcCcCchHH-----HHHHHHhhc
Q psy425 231 VIHFGSGVKHIPIE-----VSKLCRSQK 253 (254)
Q Consensus 231 ~I~~~~~~~~~~~~-----l~~~lr~lk 253 (254)
+|++..+++++++. +.+..+.||
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 139 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILK 139 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcC
Confidence 99999999999764 344445555
No 47
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.45 E-value=7.4e-13 Score=108.46 Aligned_cols=96 Identities=23% Similarity=0.174 Sum_probs=72.1
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC---CcCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP---YKKN 226 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~---~~~~ 226 (254)
.+.++.+|||+|||+|..+..+++.++ .++|+|+|+|+.+++.+.++.+. ..++. ++.+|+... .+..
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~-------~~~v~-~~~~d~~~~~~~~~~~ 124 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRE-------RNNII-PLLFDASKPWKYSGIV 124 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHH-------CSSEE-EECSCTTCGGGTTTTC
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhc-------CCCeE-EEEcCCCCchhhcccc
Confidence 457899999999999999999999975 57899999999998877776654 24788 999998753 1223
Q ss_pred CCccEEEecCcCcCchHH-HHHHHHhhcC
Q psy425 227 GPYDVIHFGSGVKHIPIE-VSKLCRSQKK 254 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~~~~-l~~~lr~lk~ 254 (254)
++||+|+++...+..... +.+..+.||+
T Consensus 125 ~~fD~V~~~~~~~~~~~~~l~~~~r~Lkp 153 (210)
T 1nt2_A 125 EKVDLIYQDIAQKNQIEILKANAEFFLKE 153 (210)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEE
T ss_pred cceeEEEEeccChhHHHHHHHHHHHHhCC
Confidence 679999998533322222 4566677764
No 48
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.45 E-value=4e-13 Score=107.76 Aligned_cols=94 Identities=15% Similarity=0.086 Sum_probs=73.3
Q ss_pred HHHHHHHhhhc-CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLSDK-LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~-~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d 218 (254)
...+++.+... ..++.+|||+|||+|.++..++... ..+|+|+|+++++++.|++++..++ ..+++ ++++|
T Consensus 30 ~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~v~-~~~~d 101 (189)
T 3p9n_A 30 RESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIARNIEALG-----LSGAT-LRRGA 101 (189)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHHHHHHHHT-----CSCEE-EEESC
T ss_pred HHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHcC-----CCceE-EEEcc
Confidence 44555555321 2578999999999999999877753 2479999999999999999998863 46899 99999
Q ss_pred CCCCCc--CCCCccEEEecCcCcCc
Q psy425 219 ARKPYK--KNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 219 ~~~~~~--~~~~fD~I~~~~~~~~~ 241 (254)
+..... ..++||+|+++..+++.
T Consensus 102 ~~~~~~~~~~~~fD~i~~~~p~~~~ 126 (189)
T 3p9n_A 102 VAAVVAAGTTSPVDLVLADPPYNVD 126 (189)
T ss_dssp HHHHHHHCCSSCCSEEEECCCTTSC
T ss_pred HHHHHhhccCCCccEEEECCCCCcc
Confidence 875321 24679999999888764
No 49
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.45 E-value=2.8e-13 Score=111.48 Aligned_cols=108 Identities=13% Similarity=0.185 Sum_probs=79.9
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..++..+. ...++.+|||||||+|..+..+++.+++.++|+++|+++++++.|++++..++ ..++++ ++++|+.
T Consensus 47 ~~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~ 120 (221)
T 3u81_A 47 GQIMDAVI-REYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG----LQDKVT-ILNGASQ 120 (221)
T ss_dssp HHHHHHHH-HHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEE-EEESCHH
T ss_pred HHHHHHHH-HhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC----CCCceE-EEECCHH
Confidence 33444443 44578899999999999999999976556799999999999999999998864 334699 9999985
Q ss_pred CCCcC------CCCccEEEecCcCcCchHH--HHHHHHhhcC
Q psy425 221 KPYKK------NGPYDVIHFGSGVKHIPIE--VSKLCRSQKK 254 (254)
Q Consensus 221 ~~~~~------~~~fD~I~~~~~~~~~~~~--l~~~lr~lk~ 254 (254)
+..+. .++||+|++....++.++. +.+.++.|||
T Consensus 121 ~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~Lkp 162 (221)
T 3u81_A 121 DLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRK 162 (221)
T ss_dssp HHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhccccCC
Confidence 32211 1579999999887766642 3333355654
No 50
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.45 E-value=8.1e-13 Score=104.32 Aligned_cols=104 Identities=17% Similarity=0.202 Sum_probs=81.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCC-CeeEEEEcC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY-KIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~-~v~~~~~~d 218 (254)
...+++.+ .+.++.+|||+|||+|.++..+++.. +..+|+++|+++++++.|++++..++ .. ++ ++.+|
T Consensus 14 ~~~~~~~~--~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~--~~~~d 83 (178)
T 3hm2_A 14 RALAISAL--APKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLG-----VSDRI--AVQQG 83 (178)
T ss_dssp HHHHHHHH--CCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTT-----CTTSE--EEECC
T ss_pred HHHHHHHh--cccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhC-----CCCCE--EEecc
Confidence 56677777 77889999999999999999999885 44689999999999999999998753 33 55 45588
Q ss_pred CCCCCcCC-CCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 219 ARKPYKKN-GPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 219 ~~~~~~~~-~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
.....+.. ++||+|+++.++++ ...+.+..+.||+
T Consensus 84 ~~~~~~~~~~~~D~i~~~~~~~~-~~~l~~~~~~L~~ 119 (178)
T 3hm2_A 84 APRAFDDVPDNPDVIFIGGGLTA-PGVFAAAWKRLPV 119 (178)
T ss_dssp TTGGGGGCCSCCSEEEECC-TTC-TTHHHHHHHTCCT
T ss_pred hHhhhhccCCCCCEEEECCcccH-HHHHHHHHHhcCC
Confidence 76544432 67999999999887 5556667777764
No 51
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.45 E-value=2.8e-13 Score=113.04 Aligned_cols=85 Identities=12% Similarity=0.134 Sum_probs=70.2
Q ss_pred hhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCC
Q psy425 147 LSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKN 226 (254)
Q Consensus 147 l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~ 226 (254)
+...++++.+|||||||+|++++.+++.. +..+|+++|+++.+++.|++|++.++ ..++|+ +..+|+.....+.
T Consensus 15 i~~~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~g----l~~~I~-v~~gD~l~~~~~~ 88 (244)
T 3gnl_A 15 VASYITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSG----LTEQID-VRKGNGLAVIEKK 88 (244)
T ss_dssp HHTTCCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTT----CTTTEE-EEECSGGGGCCGG
T ss_pred HHHhCCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEE-EEecchhhccCcc
Confidence 33457789999999999999999999884 44589999999999999999999875 345699 9999998766544
Q ss_pred CCccEEEecCc
Q psy425 227 GPYDVIHFGSG 237 (254)
Q Consensus 227 ~~fD~I~~~~~ 237 (254)
.+||+|++.++
T Consensus 89 ~~~D~Iviagm 99 (244)
T 3gnl_A 89 DAIDTIVIAGM 99 (244)
T ss_dssp GCCCEEEEEEE
T ss_pred ccccEEEEeCC
Confidence 45999886554
No 52
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.44 E-value=9e-13 Score=125.46 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=87.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISY-PKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~v~~~~~~d 218 (254)
...+++.+ ...++.+|||||||+|.++..+++.+++..+|+|+|+++.+++.|++++.... ....+..+++ ++++|
T Consensus 710 le~LLelL--~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVe-fiqGD 786 (950)
T 3htx_A 710 VEYALKHI--RESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSAT-LYDGS 786 (950)
T ss_dssp HHHHHHHH--HHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEE-EEESC
T ss_pred HHHHHHHh--cccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceE-EEECc
Confidence 45566666 44588999999999999999999886444589999999999999999776421 0001345799 99999
Q ss_pred CCCCCcCCCCccEEEecCcCcCchHHH-----HHHHHhhcC
Q psy425 219 ARKPYKKNGPYDVIHFGSGVKHIPIEV-----SKLCRSQKK 254 (254)
Q Consensus 219 ~~~~~~~~~~fD~I~~~~~~~~~~~~l-----~~~lr~lk~ 254 (254)
+.......++||+|++..+++|++++. .+..+.|||
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKP 827 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHP 827 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCC
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCC
Confidence 987666667899999999999998643 455677764
No 53
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.44 E-value=6e-13 Score=111.60 Aligned_cols=105 Identities=17% Similarity=0.102 Sum_probs=81.1
Q ss_pred HHHHHHHh---hhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEE
Q psy425 140 QAACLQHL---SDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVE 216 (254)
Q Consensus 140 ~~~~l~~l---~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~ 216 (254)
...+++.+ ...+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|++++.. ...+++ +..
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~------~~~~~~-~~~ 92 (263)
T 2yqz_A 23 AGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAG------VDRKVQ-VVQ 92 (263)
T ss_dssp HHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTT------SCTTEE-EEE
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhc------cCCceE-EEE
Confidence 34445554 2356788999999999999999998773 3799999999999999999722 356899 999
Q ss_pred cCCCCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhcC
Q psy425 217 WDARKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQKK 254 (254)
Q Consensus 217 ~d~~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk~ 254 (254)
+|+.......++||+|++..+++++++ .+.+..+.||+
T Consensus 93 ~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~p 133 (263)
T 2yqz_A 93 ADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKP 133 (263)
T ss_dssp SCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEE
T ss_pred cccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCC
Confidence 999865445567999999999988853 34555566653
No 54
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.44 E-value=4e-13 Score=108.95 Aligned_cols=104 Identities=14% Similarity=0.183 Sum_probs=81.2
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+...+.++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++..+ +..+++ +..+|+
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~v~-~~~~d~ 118 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAALN-----GIYDIA-LQKTSL 118 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHT-----TCCCCE-EEESST
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHc-----CCCceE-EEeccc
Confidence 455566664447789999999999999999988763 348999999999999999999875 344599 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
.... .++||+|+++..++++...+.+..+.||
T Consensus 119 ~~~~--~~~fD~i~~~~~~~~~~~~l~~~~~~L~ 150 (205)
T 3grz_A 119 LADV--DGKFDLIVANILAEILLDLIPQLDSHLN 150 (205)
T ss_dssp TTTC--CSCEEEEEEESCHHHHHHHGGGSGGGEE
T ss_pred cccC--CCCceEEEECCcHHHHHHHHHHHHHhcC
Confidence 7643 3569999999887766555555555554
No 55
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.43 E-value=5.5e-13 Score=109.08 Aligned_cols=99 Identities=17% Similarity=0.143 Sum_probs=79.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.+++++. .+++ +..+|+
T Consensus 34 ~~~~l~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~---------~~~~-~~~~d~ 98 (220)
T 3hnr_A 34 YEDILEDV--VNKSFGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLP---------KEFS-ITEGDF 98 (220)
T ss_dssp HHHHHHHH--HHTCCSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSC---------TTCC-EESCCS
T ss_pred HHHHHHHh--hccCCCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCC---------CceE-EEeCCh
Confidence 45666776 45688999999999999999999873 379999999999999998753 3788 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
...... ++||+|++..+++++++. +.+..+.||+
T Consensus 99 ~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 137 (220)
T 3hnr_A 99 LSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNK 137 (220)
T ss_dssp SSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCT
T ss_pred hhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCC
Confidence 865444 679999999999998874 4455566654
No 56
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.43 E-value=6.4e-13 Score=105.75 Aligned_cols=105 Identities=18% Similarity=0.123 Sum_probs=84.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++..++ ...+++ +..+|+
T Consensus 22 ~~~~~~~~--~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~----~~~~~~-~~~~d~ 91 (192)
T 1l3i_A 22 RCLIMCLA--EPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHG----LGDNVT-LMEGDA 91 (192)
T ss_dssp HHHHHHHH--CCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTT----CCTTEE-EEESCH
T ss_pred HHHHHHhc--CCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcC----CCcceE-EEecCH
Confidence 55666666 77889999999999999999998876 479999999999999999998753 226899 999998
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
....+..++||+|++..+++++...+.+..+.||+
T Consensus 92 ~~~~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~ 126 (192)
T 1l3i_A 92 PEALCKIPDIDIAVVGGSGGELQEILRIIKDKLKP 126 (192)
T ss_dssp HHHHTTSCCEEEEEESCCTTCHHHHHHHHHHTEEE
T ss_pred HHhcccCCCCCEEEECCchHHHHHHHHHHHHhcCC
Confidence 75333324799999999888887777776676653
No 57
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.43 E-value=9.2e-13 Score=107.28 Aligned_cols=90 Identities=22% Similarity=0.301 Sum_probs=74.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+. .+.++.+|||+|||+|.++..+++.. . +|+|+|+++.+++.|++ . +..+++ ++++|+
T Consensus 34 ~~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~~-~--~v~~~D~s~~~~~~a~~---~------~~~~~~-~~~~d~ 99 (218)
T 3ou2_A 34 APAALERLR-AGNIRGDVLELASGTGYWTRHLSGLA-D--RVTALDGSAEMIAEAGR---H------GLDNVE-FRQQDL 99 (218)
T ss_dssp HHHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHHS-S--EEEEEESCHHHHHHHGG---G------CCTTEE-EEECCT
T ss_pred HHHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhcC-C--eEEEEeCCHHHHHHHHh---c------CCCCeE-EEeccc
Confidence 445566663 46788899999999999999999883 3 79999999999999988 2 346899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHH
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIE 244 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~ 244 (254)
... ...++||+|+++.++++++++
T Consensus 100 ~~~-~~~~~~D~v~~~~~l~~~~~~ 123 (218)
T 3ou2_A 100 FDW-TPDRQWDAVFFAHWLAHVPDD 123 (218)
T ss_dssp TSC-CCSSCEEEEEEESCGGGSCHH
T ss_pred ccC-CCCCceeEEEEechhhcCCHH
Confidence 876 455679999999999999875
No 58
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.43 E-value=1.2e-12 Score=113.40 Aligned_cols=102 Identities=17% Similarity=0.037 Sum_probs=80.2
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+++.+ .+.++.+|||||||+|.++..+++..+. +|+|+|+++++++.|++++...+ ...+++ +..+|+.
T Consensus 80 ~~~~~~~--~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~ 150 (318)
T 2fk8_A 80 DLNLDKL--DLKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASID----TNRSRQ-VLLQGWE 150 (318)
T ss_dssp HHHHTTS--CCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTSC----CSSCEE-EEESCGG
T ss_pred HHHHHhc--CCCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC----CCCceE-EEECChH
Confidence 3344444 5678999999999999999999988643 89999999999999999988753 235699 9999987
Q ss_pred CCCcCCCCccEEEecCcCcCch-----HHHHHHHHhhcC
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIP-----IEVSKLCRSQKK 254 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~-----~~l~~~lr~lk~ 254 (254)
... ++||+|++..++++++ ..+.+..+.|||
T Consensus 151 ~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 186 (318)
T 2fk8_A 151 DFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPA 186 (318)
T ss_dssp GCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCT
T ss_pred HCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCC
Confidence 532 5699999999998883 335555566664
No 59
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.43 E-value=2.3e-13 Score=111.85 Aligned_cols=108 Identities=18% Similarity=0.159 Sum_probs=82.9
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..++..+. ...++.+|||+|||+|..+..+++..++.++|+++|+++++++.|++++...+ ...+++ ++++|+.
T Consensus 53 ~~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~ 126 (225)
T 3tr6_A 53 AQLLALLV-KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG----LSDKIG-LRLSPAK 126 (225)
T ss_dssp HHHHHHHH-HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEESCHH
T ss_pred HHHHHHHH-HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC----CCCceE-EEeCCHH
Confidence 34444443 34578899999999999999999887546799999999999999999998864 234699 9999986
Q ss_pred CCCcC------CCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 221 KPYKK------NGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 221 ~~~~~------~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
+..+. .++||+|++.......+..+.+..+.||+
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~p 166 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLRE 166 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEE
T ss_pred HHHHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCC
Confidence 43211 15799999988766677767777777764
No 60
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.43 E-value=1.2e-12 Score=105.14 Aligned_cols=90 Identities=22% Similarity=0.166 Sum_probs=74.5
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+++.+ ...++.+|||+|||+|.++..+++.. . +|+|+|+++.+++.+++++... ...+++ +..+|+.
T Consensus 22 ~~l~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~-~~~~d~~ 90 (199)
T 2xvm_A 22 SEVLEAV--KVVKPGKTLDLGCGNGRNSLYLAANG-Y--DVDAWDKNAMSIANVERIKSIE-----NLDNLH-TRVVDLN 90 (199)
T ss_dssp HHHHHHT--TTSCSCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHH-----TCTTEE-EEECCGG
T ss_pred HHHHHHh--hccCCCeEEEEcCCCCHHHHHHHHCC-C--eEEEEECCHHHHHHHHHHHHhC-----CCCCcE-EEEcchh
Confidence 3455666 55678899999999999999999873 3 7999999999999999998875 345799 9999998
Q ss_pred CCCcCCCCccEEEecCcCcCch
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIP 242 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~ 242 (254)
.... .++||+|++..++++++
T Consensus 91 ~~~~-~~~~D~v~~~~~l~~~~ 111 (199)
T 2xvm_A 91 NLTF-DRQYDFILSTVVLMFLE 111 (199)
T ss_dssp GCCC-CCCEEEEEEESCGGGSC
T ss_pred hCCC-CCCceEEEEcchhhhCC
Confidence 6444 56799999999998775
No 61
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.43 E-value=6.4e-13 Score=116.21 Aligned_cols=109 Identities=20% Similarity=0.214 Sum_probs=80.1
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhC----CCcc--cCCCeeE
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISY----PKLY--KLYKIMD 213 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~----~~~~--~~~~v~~ 213 (254)
...+++.+ .+.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.|++++...+ -... ...+++
T Consensus 94 ~~~~l~~l--~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~- 170 (336)
T 2b25_A 94 INMILSMM--DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD- 170 (336)
T ss_dssp HHHHHHHH--TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE-
T ss_pred HHHHHHhc--CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE-
Confidence 67778877 78899999999999999999999987666799999999999999999987521 0000 135899
Q ss_pred EEEcCCCCCC--cCCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 214 VVEWDARKPY--KKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 214 ~~~~d~~~~~--~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
+..+|+.... ...++||+|+++...+.. .+.+..+.||
T Consensus 171 ~~~~d~~~~~~~~~~~~fD~V~~~~~~~~~--~l~~~~~~Lk 210 (336)
T 2b25_A 171 FIHKDISGATEDIKSLTFDAVALDMLNPHV--TLPVFYPHLK 210 (336)
T ss_dssp EEESCTTCCC-------EEEEEECSSSTTT--THHHHGGGEE
T ss_pred EEECChHHcccccCCCCeeEEEECCCCHHH--HHHHHHHhcC
Confidence 9999998642 234569999997643322 3555556665
No 62
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.4e-12 Score=112.08 Aligned_cols=98 Identities=11% Similarity=-0.039 Sum_probs=77.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCCcccCCCeeEEEEcCCCCCCcCC---
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKIS-YPKLYKLYKIMDVVEWDARKPYKKN--- 226 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~v~~~~~~d~~~~~~~~--- 226 (254)
..++.+|||||||+|..+..+++.+.+..+|+|+|+++.+++.|++++... + ...+++ ++++|+.......
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~v~-~~~~d~~~~~~~~~~~ 108 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD----TYKNVS-FKISSSDDFKFLGADS 108 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-----CCTTEE-EEECCTTCCGGGCTTT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC----CCCceE-EEEcCHHhCCcccccc
Confidence 458899999999999999999987645568999999999999999998873 1 256899 9999998644444
Q ss_pred ---CCccEEEecCcCcCch--HHHHHHHHhhc
Q psy425 227 ---GPYDVIHFGSGVKHIP--IEVSKLCRSQK 253 (254)
Q Consensus 227 ---~~fD~I~~~~~~~~~~--~~l~~~lr~lk 253 (254)
++||+|++..+++++. ..+.+..+.||
T Consensus 109 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lk 140 (299)
T 3g5t_A 109 VDKQKIDMITAVECAHWFDFEKFQRSAYANLR 140 (299)
T ss_dssp TTSSCEEEEEEESCGGGSCHHHHHHHHHHHEE
T ss_pred ccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcC
Confidence 6799999999998772 22444445554
No 63
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.43 E-value=2e-12 Score=106.05 Aligned_cols=104 Identities=20% Similarity=0.096 Sum_probs=79.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+.+.+...+.++.+|||+|||+|.++..+++.. + +++|+|+++++++.|++++..+ ..+++ ++.+|+
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~------~~~~~-~~~~d~ 94 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYG-F--EVVGVDISEDMIRKAREYAKSR------ESNVE-FIVGDA 94 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHT------TCCCE-EEECCT
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHhc------CCCce-EEECch
Confidence 455566665566778999999999999999998875 4 7999999999999999998774 26899 999999
Q ss_pred CCCCcCCCCccEEEecCc--CcCchH---HHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSG--VKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~--~~~~~~---~l~~~lr~lk 253 (254)
.......++||+|+++.+ +.+.++ .+.+..+.||
T Consensus 95 ~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~ 133 (227)
T 1ve3_A 95 RKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLK 133 (227)
T ss_dssp TSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEE
T ss_pred hcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcC
Confidence 864444567999999998 544432 2344445444
No 64
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.43 E-value=4.5e-13 Score=112.43 Aligned_cols=109 Identities=21% Similarity=0.202 Sum_probs=85.2
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+. ...++.+|||||||+|+.+..+++...+.++|+++|+++++++.|++++...+ ...+++ ++.+|+
T Consensus 67 ~~~ll~~l~-~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g----~~~~i~-~~~gda 140 (247)
T 1sui_A 67 EGQFLSMLL-KLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG----VDHKID-FREGPA 140 (247)
T ss_dssp HHHHHHHHH-HHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT----CGGGEE-EEESCH
T ss_pred HHHHHHHHH-HhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCCeE-EEECCH
Confidence 344444443 34567899999999999999999987546799999999999999999998864 235799 999998
Q ss_pred CCCCc-------CCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYK-------KNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~-------~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
.+..+ ..++||+|++.......+..+.+.++.||+
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkp 182 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKV 182 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCT
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCC
Confidence 64321 145799999998777777777777787775
No 65
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.42 E-value=8.7e-13 Score=112.62 Aligned_cols=106 Identities=19% Similarity=0.260 Sum_probs=82.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+. .+.++.+|||||||+|..+..+++..+...+|+|+|+++.+++.|++++... ..+++ +.++|+
T Consensus 10 ~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~~~v~-~~~~d~ 81 (284)
T 3gu3_A 10 VSFLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL------PYDSE-FLEGDA 81 (284)
T ss_dssp HHHHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS------SSEEE-EEESCT
T ss_pred HHHHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc------CCceE-EEEcch
Confidence 444555443 5678899999999999999999988643468999999999999999998763 23899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk~ 254 (254)
..... .++||+|++..+++++++ .+.+..+.|||
T Consensus 82 ~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp 118 (284)
T 3gu3_A 82 TEIEL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKK 118 (284)
T ss_dssp TTCCC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEE
T ss_pred hhcCc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCC
Confidence 86444 457999999999987754 34555565553
No 66
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.42 E-value=3.9e-13 Score=111.45 Aligned_cols=99 Identities=16% Similarity=0.187 Sum_probs=77.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+. ...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.|+++... +++ ++++|+
T Consensus 30 ~~~~~~~l~-~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~---------~v~-~~~~d~ 95 (250)
T 2p7i_A 30 HPFMVRAFT-PFFRPGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKD---------GIT-YIHSRF 95 (250)
T ss_dssp HHHHHHHHG-GGCCSSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCS---------CEE-EEESCG
T ss_pred HHHHHHHHH-hhcCCCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhC---------CeE-EEEccH
Confidence 455666664 345778999999999999999988753 599999999999999987431 788 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHH---HHHHH-Hhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIE---VSKLC-RSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~---l~~~l-r~lk 253 (254)
... ..+++||+|++..+++|+++. +.+.. +.||
T Consensus 96 ~~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~Lk 132 (250)
T 2p7i_A 96 EDA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLA 132 (250)
T ss_dssp GGC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEE
T ss_pred HHc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcC
Confidence 865 345679999999999888653 44444 4554
No 67
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.42 E-value=2.1e-12 Score=108.18 Aligned_cols=105 Identities=17% Similarity=0.204 Sum_probs=82.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+ .+.++.+|||+|||+|.++..+++..++.++|+++|+++++++.|++++..++ ...+++ +.++|+
T Consensus 82 ~~~i~~~~--~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~----~~~~v~-~~~~d~ 154 (255)
T 3mb5_A 82 AALIVAYA--GISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG----FDDRVT-IKLKDI 154 (255)
T ss_dssp HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT----CTTTEE-EECSCG
T ss_pred HHHHHHhh--CCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC----CCCceE-EEECch
Confidence 56667776 78899999999999999999999996666799999999999999999998863 233499 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
.+..+ .++||+|+++.. .....+.+..+.||+
T Consensus 155 ~~~~~-~~~~D~v~~~~~--~~~~~l~~~~~~L~~ 186 (255)
T 3mb5_A 155 YEGIE-EENVDHVILDLP--QPERVVEHAAKALKP 186 (255)
T ss_dssp GGCCC-CCSEEEEEECSS--CGGGGHHHHHHHEEE
T ss_pred hhccC-CCCcCEEEECCC--CHHHHHHHHHHHcCC
Confidence 86543 456999999643 333345566666653
No 68
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.41 E-value=2.4e-12 Score=104.24 Aligned_cols=93 Identities=14% Similarity=0.048 Sum_probs=72.1
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+. ...++.+|||+|||+|..+..++...+ .+|+|+|+++.+++.|++++... ..+++ +..+|+
T Consensus 11 ~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~------~~~~~-~~~~d~ 80 (209)
T 2p8j_A 11 LYRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSREN------NFKLN-ISKGDI 80 (209)
T ss_dssp HHHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHH------TCCCC-EEECCT
T ss_pred HHHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhc------CCceE-EEECch
Confidence 444555543 566789999999999998544443323 38999999999999999998774 25788 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCch
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIP 242 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~ 242 (254)
.......++||+|++..++++++
T Consensus 81 ~~~~~~~~~fD~v~~~~~l~~~~ 103 (209)
T 2p8j_A 81 RKLPFKDESMSFVYSYGTIFHMR 103 (209)
T ss_dssp TSCCSCTTCEEEEEECSCGGGSC
T ss_pred hhCCCCCCceeEEEEcChHHhCC
Confidence 86544556799999999998884
No 69
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.41 E-value=3.5e-13 Score=116.23 Aligned_cols=100 Identities=15% Similarity=0.052 Sum_probs=78.7
Q ss_pred hhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCC
Q psy425 148 SDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNG 227 (254)
Q Consensus 148 ~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~ 227 (254)
...+.++.+|||||||+|..+..++....+..+|+|+|+++.+++.|++++...+ ...+++ ++++|+.....+ +
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~-~ 186 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA----LAGQIT-LHRQDAWKLDTR-E 186 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST----TGGGEE-EEECCGGGCCCC-S
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC----CCCceE-EEECchhcCCcc-C
Confidence 3367889999999999999999886333456699999999999999999988753 234599 999999865444 6
Q ss_pred CccEEEecCcCcCchHH------HHHHHHhhc
Q psy425 228 PYDVIHFGSGVKHIPIE------VSKLCRSQK 253 (254)
Q Consensus 228 ~fD~I~~~~~~~~~~~~------l~~~lr~lk 253 (254)
+||+|+++.+++++++. +.+..+.||
T Consensus 187 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~Lk 218 (305)
T 3ocj_A 187 GYDLLTSNGLNIYEPDDARVTELYRRFWQALK 218 (305)
T ss_dssp CEEEEECCSSGGGCCCHHHHHHHHHHHHHHEE
T ss_pred CeEEEEECChhhhcCCHHHHHHHHHHHHHhcC
Confidence 79999999999887532 444455555
No 70
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=1e-12 Score=106.62 Aligned_cols=92 Identities=18% Similarity=0.144 Sum_probs=74.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+.+.+...+.++.+|||+|||+|.++..+++.... +|+|+|+++.+++.|+++... ..+++ +..+|+
T Consensus 29 ~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~-------~~~i~-~~~~d~ 98 (215)
T 2pxx_A 29 FSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAH-------VPQLR-WETMDV 98 (215)
T ss_dssp HHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTT-------CTTCE-EEECCT
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhccc-------CCCcE-EEEcch
Confidence 34456666556788999999999999999999988532 799999999999999998754 24799 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~ 241 (254)
.......++||+|+++.++.++
T Consensus 99 ~~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 99 RKLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp TSCCSCSSCEEEEEEESHHHHH
T ss_pred hcCCCCCCcccEEEECcchhhh
Confidence 8654445679999998887544
No 71
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.40 E-value=1.4e-12 Score=108.87 Aligned_cols=90 Identities=11% Similarity=0.045 Sum_probs=73.3
Q ss_pred HHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC
Q psy425 142 ACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK 221 (254)
Q Consensus 142 ~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~ 221 (254)
.+++.+ ...++.+|||||||+|.++..+++.+. .+|+++|+++.+++.|++++.. ..+++ +.++|+..
T Consensus 84 ~~l~~l--~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~-------~~~~~-~~~~d~~~ 151 (254)
T 1xtp_A 84 NFIASL--PGHGTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAG-------MPVGK-FILASMET 151 (254)
T ss_dssp HHHHTS--TTCCCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTT-------SSEEE-EEESCGGG
T ss_pred HHHHhh--cccCCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhcc-------CCceE-EEEccHHH
Confidence 344444 455789999999999999999998863 3799999999999999998765 25788 99999986
Q ss_pred CCcCCCCccEEEecCcCcCchH
Q psy425 222 PYKKNGPYDVIHFGSGVKHIPI 243 (254)
Q Consensus 222 ~~~~~~~fD~I~~~~~~~~~~~ 243 (254)
.....++||+|++..+++++++
T Consensus 152 ~~~~~~~fD~v~~~~~l~~~~~ 173 (254)
T 1xtp_A 152 ATLPPNTYDLIVIQWTAIYLTD 173 (254)
T ss_dssp CCCCSSCEEEEEEESCGGGSCH
T ss_pred CCCCCCCeEEEEEcchhhhCCH
Confidence 5445567999999999999853
No 72
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.40 E-value=3.9e-12 Score=108.02 Aligned_cols=106 Identities=19% Similarity=0.154 Sum_probs=82.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKIS-YPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~v~~~~~~d 218 (254)
...++..+ .+.++.+|||+|||+|.++..+++..++.++|+++|+++++++.|++++..+ + ....+++ +.++|
T Consensus 88 ~~~i~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g---~~~~~v~-~~~~d 161 (280)
T 1i9g_A 88 AAQIVHEG--DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG---QPPDNWR-LVVSD 161 (280)
T ss_dssp HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT---SCCTTEE-EECSC
T ss_pred HHHHHHHc--CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCCcEE-EEECc
Confidence 66677777 7889999999999999999999997666679999999999999999998773 1 0146899 99999
Q ss_pred CCCCCcCCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 219 ARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 219 ~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
+.......++||+|+++.. +....+.+..+.||
T Consensus 162 ~~~~~~~~~~~D~v~~~~~--~~~~~l~~~~~~L~ 194 (280)
T 1i9g_A 162 LADSELPDGSVDRAVLDML--APWEVLDAVSRLLV 194 (280)
T ss_dssp GGGCCCCTTCEEEEEEESS--CGGGGHHHHHHHEE
T ss_pred hHhcCCCCCceeEEEECCc--CHHHHHHHHHHhCC
Confidence 9865444567999999543 33344555555555
No 73
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=4e-13 Score=111.54 Aligned_cols=95 Identities=13% Similarity=0.077 Sum_probs=70.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC--CcCCCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP--YKKNGP 228 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~--~~~~~~ 228 (254)
..++.+|||||||+|.++..+++... .+|+|+|+++.+++.|+++.... ..+++ ++++|+... ...+++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~------~~~v~-~~~~d~~~~~~~~~~~~ 128 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQ------THKVI-PLKGLWEDVAPTLPDGH 128 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGC------SSEEE-EEESCHHHHGGGSCTTC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhc------CCCeE-EEecCHHHhhcccCCCc
Confidence 46789999999999999999876532 37999999999999999988763 35799 999998754 334567
Q ss_pred ccEEEe-cCcC--cCch-----HHHHHHHHhhcC
Q psy425 229 YDVIHF-GSGV--KHIP-----IEVSKLCRSQKK 254 (254)
Q Consensus 229 fD~I~~-~~~~--~~~~-----~~l~~~lr~lk~ 254 (254)
||+|++ ..++ +... ..+.+..+.||+
T Consensus 129 fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkp 162 (236)
T 1zx0_A 129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP 162 (236)
T ss_dssp EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred eEEEEECCcccchhhhhhhhHHHHHHHHHHhcCC
Confidence 999999 4443 2221 225556666664
No 74
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.40 E-value=4.6e-12 Score=103.53 Aligned_cols=96 Identities=13% Similarity=0.076 Sum_probs=75.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--cCCCCc
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY--KKNGPY 229 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~--~~~~~f 229 (254)
.++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++..+ +..+++ ++++|+.... ...++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~-----~~~~v~-~~~~d~~~~~~~~~~~~~ 112 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEV-----GVPNIK-LLWVDGSDLTDYFEDGEI 112 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHH-----CCSSEE-EEECCSSCGGGTSCTTCC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHc-----CCCCEE-EEeCCHHHHHhhcCCCCC
Confidence 467899999999999999999986 4568999999999999999999886 347899 9999998632 335579
Q ss_pred cEEEecCcCcCc-----------hHHHHHHHHhhcC
Q psy425 230 DVIHFGSGVKHI-----------PIEVSKLCRSQKK 254 (254)
Q Consensus 230 D~I~~~~~~~~~-----------~~~l~~~lr~lk~ 254 (254)
|+|+++...+.. +..+.+..+.||+
T Consensus 113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 148 (214)
T 1yzh_A 113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPE 148 (214)
T ss_dssp SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCT
T ss_pred CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCC
Confidence 999998764321 2345555566664
No 75
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.40 E-value=1.8e-12 Score=115.53 Aligned_cols=103 Identities=18% Similarity=0.203 Sum_probs=80.2
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCC---cccCCCeeEEEEcCCCCC-----
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPK---LYKLYKIMDVVEWDARKP----- 222 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~~~~~v~~~~~~d~~~~----- 222 (254)
+.++.+|||+|||+|..+..+++..++.++|+|+|+++.+++.|++++..+... .....+++ ++.+|+...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~-~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVR-FLKGFIENLATAEP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEE-EEESCTTCGGGCBS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceE-EEEccHHHhhhccc
Confidence 557899999999999999999999866679999999999999999988653100 00126899 999999864
Q ss_pred -CcCCCCccEEEecCcCcCchH---HHHHHHHhhcC
Q psy425 223 -YKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQKK 254 (254)
Q Consensus 223 -~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk~ 254 (254)
....++||+|+++.+++++++ .+.+..+.||+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkp 195 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRD 195 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCC
Confidence 344567999999999987754 35555566653
No 76
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.39 E-value=1.3e-12 Score=108.24 Aligned_cols=99 Identities=16% Similarity=0.158 Sum_probs=77.9
Q ss_pred HHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC
Q psy425 143 CLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP 222 (254)
Q Consensus 143 ~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~ 222 (254)
+++.+...+.++.+|||+|||+|.++..+++.. . +|+|+|+++.+++.++++.. ..+++ ++.+|+...
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~--------~~~~~-~~~~d~~~~ 110 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTG-Y--KAVGVDISEVMIQKGKERGE--------GPDLS-FIKGDLSSL 110 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHTTTC--------BTTEE-EEECBTTBC
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcC-C--eEEEEECCHHHHHHHHhhcc--------cCCce-EEEcchhcC
Confidence 344444456789999999999999999999883 3 79999999999999988742 35899 999999865
Q ss_pred CcCCCCccEEEecCcCcCchHH---HHHHHHhhc
Q psy425 223 YKKNGPYDVIHFGSGVKHIPIE---VSKLCRSQK 253 (254)
Q Consensus 223 ~~~~~~fD~I~~~~~~~~~~~~---l~~~lr~lk 253 (254)
....++||+|++..+++|+++. +.+..+.||
T Consensus 111 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~ 144 (242)
T 3l8d_A 111 PFENEQFEAIMAINSLEWTEEPLRALNEIKRVLK 144 (242)
T ss_dssp SSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEE
T ss_pred CCCCCCccEEEEcChHhhccCHHHHHHHHHHHhC
Confidence 5556789999999999888653 444455554
No 77
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.39 E-value=9.2e-13 Score=109.07 Aligned_cols=107 Identities=15% Similarity=0.138 Sum_probs=83.6
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+...+ ...++.+|||+|||+|..+..+++.. +.++|+++|+++++++.|++++...+ ...+++ +..+|+
T Consensus 43 ~~~l~~~~--~~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~-~~~~d~ 114 (233)
T 2gpy_A 43 MESLLHLL--KMAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALG----LESRIE-LLFGDA 114 (233)
T ss_dssp HHHHHHHH--HHHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTT----CTTTEE-EECSCG
T ss_pred HHHHHHHH--hccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEECCH
Confidence 44444444 45678899999999999999999986 35689999999999999999998853 234799 999998
Q ss_pred CCCCcC---CCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYKK---NGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~---~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
....+. .++||+|++....+..+..+.+..+.||+
T Consensus 115 ~~~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~p 152 (233)
T 2gpy_A 115 LQLGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRP 152 (233)
T ss_dssp GGSHHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEE
T ss_pred HHHHHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCC
Confidence 763221 35799999998877777766677677663
No 78
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.39 E-value=1.4e-12 Score=111.08 Aligned_cols=93 Identities=19% Similarity=0.163 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-cCCCCccE
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-KKNGPYDV 231 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-~~~~~fD~ 231 (254)
++.+|||||||+|.++..+++.. . +|+|+|+++.+++.|++++...+ ...+++ ++.+|+.... ...++||+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~~~~~fD~ 139 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERG-H--QVILCDLSAQMIDRAKQAAEAKG----VSDNMQ-FIHCAAQDVASHLETPVDL 139 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHC-C----CGGGEE-EEESCGGGTGGGCSSCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCC-C--EEEEEECCHHHHHHHHHHHHhcC----CCcceE-EEEcCHHHhhhhcCCCceE
Confidence 46899999999999999999883 3 79999999999999999988753 236899 9999998654 34567999
Q ss_pred EEecCcCcCchH---HHHHHHHhhc
Q psy425 232 IHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 232 I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
|++..+++++++ .+.+..+.||
T Consensus 140 v~~~~~l~~~~~~~~~l~~~~~~Lk 164 (285)
T 4htf_A 140 ILFHAVLEWVADPRSVLQTLWSVLR 164 (285)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHTEE
T ss_pred EEECchhhcccCHHHHHHHHHHHcC
Confidence 999999987764 3445555555
No 79
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.39 E-value=9e-13 Score=109.79 Aligned_cols=95 Identities=20% Similarity=0.191 Sum_probs=74.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC---CCC
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK---NGP 228 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~---~~~ 228 (254)
.++.+|||+|||+|..+..++... +..+|+|+|+++++++.|++++..+ +..+++ ++++|+...... .++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~v~-~~~~d~~~~~~~~~~~~~ 141 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEAL-----QLENTT-FCHDRAETFGQRKDVRES 141 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHH-----TCSSEE-EEESCHHHHTTCTTTTTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHc-----CCCCEE-EEeccHHHhcccccccCC
Confidence 478899999999999999999864 4568999999999999999999885 345799 999998753321 457
Q ss_pred ccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 229 YDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 229 fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
||+|++.. +.+....+.+..+.||+
T Consensus 142 fD~V~~~~-~~~~~~~l~~~~~~Lkp 166 (240)
T 1xdz_A 142 YDIVTARA-VARLSVLSELCLPLVKK 166 (240)
T ss_dssp EEEEEEEC-CSCHHHHHHHHGGGEEE
T ss_pred ccEEEEec-cCCHHHHHHHHHHhcCC
Confidence 99999987 35555545555566653
No 80
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.39 E-value=2.2e-12 Score=108.00 Aligned_cols=99 Identities=16% Similarity=0.114 Sum_probs=77.6
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.++++. .+++ +..+|+
T Consensus 22 ~~~l~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~----------~~~~-~~~~d~ 87 (259)
T 2p35_A 22 ARDLLAQV--PLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL----------PNTN-FGKADL 87 (259)
T ss_dssp HHHHHTTC--CCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS----------TTSE-EEECCT
T ss_pred HHHHHHhc--CCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC----------CCcE-EEECCh
Confidence 34455555 56678999999999999999999986 3457999999999999998871 3688 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
.... ..++||+|+++.+++++++ .+.+..+.||
T Consensus 88 ~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~ 123 (259)
T 2p35_A 88 ATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLE 123 (259)
T ss_dssp TTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEE
T ss_pred hhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcC
Confidence 8654 5567999999999988854 2444445555
No 81
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.39 E-value=2.7e-12 Score=109.48 Aligned_cols=96 Identities=19% Similarity=0.152 Sum_probs=76.4
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.++++.+|||+|||+|.++..+++.+.. +|+|+|+++.+++.|++|+..++ ...+++ +.++|+..... .++|
T Consensus 122 ~~~~~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~----~~~~v~-~~~~D~~~~~~-~~~f 193 (278)
T 2frn_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNK----VEDRMS-AYNMDNRDFPG-ENIA 193 (278)
T ss_dssp HCCTTCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTT----CTTTEE-EECSCTTTCCC-CSCE
T ss_pred hCCCCCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcC----CCceEE-EEECCHHHhcc-cCCc
Confidence 3567999999999999999999998643 79999999999999999999864 234599 99999987554 5679
Q ss_pred cEEEecCcCcCchHHHHHHHHhhcC
Q psy425 230 DVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 230 D~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
|+|+++... .....+.+.++.||+
T Consensus 194 D~Vi~~~p~-~~~~~l~~~~~~Lkp 217 (278)
T 2frn_A 194 DRILMGYVV-RTHEFIPKALSIAKD 217 (278)
T ss_dssp EEEEECCCS-SGGGGHHHHHHHEEE
T ss_pred cEEEECCch-hHHHHHHHHHHHCCC
Confidence 999997653 333445566676663
No 82
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=1.4e-12 Score=108.53 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=78.9
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
...+..+...+.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|++++. ..+++ ++++|+.
T Consensus 44 ~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~--------~~~~~-~~~~d~~ 111 (245)
T 3ggd_A 44 VVDLPRFELLFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT--------AANIS-YRLLDGL 111 (245)
T ss_dssp HHHHHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC--------CTTEE-EEECCTT
T ss_pred HHHHHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc--------ccCce-EEECccc
Confidence 334444444677889999999999999999999864 59999999999999999863 24799 9999998
Q ss_pred CCCcC-----CCCccEEEecCcCcCch-----HHHHHHHHhhcC
Q psy425 221 KPYKK-----NGPYDVIHFGSGVKHIP-----IEVSKLCRSQKK 254 (254)
Q Consensus 221 ~~~~~-----~~~fD~I~~~~~~~~~~-----~~l~~~lr~lk~ 254 (254)
..... ..+||+|+++.++++++ ..+.+..+.||+
T Consensus 112 ~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~Lkp 155 (245)
T 3ggd_A 112 VPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGK 155 (245)
T ss_dssp CHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTT
T ss_pred ccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCC
Confidence 53221 13489999999998887 345555566664
No 83
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.39 E-value=1.2e-12 Score=108.81 Aligned_cols=83 Identities=18% Similarity=0.057 Sum_probs=70.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEE
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVI 232 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I 232 (254)
++.+|||||||+|.++..+++... .+|+|+|+++.+++.|++++... +..+++ +..+|+.......++||+|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~-~~~~d~~~~~~~~~~fD~v 150 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEE-----GKRVRN-YFCCGLQDFTPEPDSYDVI 150 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGG-----GGGEEE-EEECCGGGCCCCSSCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhc-----CCceEE-EEEcChhhcCCCCCCEEEE
Confidence 588999999999999999887752 48999999999999999998763 234688 9999987655555679999
Q ss_pred EecCcCcCchH
Q psy425 233 HFGSGVKHIPI 243 (254)
Q Consensus 233 ~~~~~~~~~~~ 243 (254)
++..+++++++
T Consensus 151 ~~~~~l~~~~~ 161 (241)
T 2ex4_A 151 WIQWVIGHLTD 161 (241)
T ss_dssp EEESCGGGSCH
T ss_pred EEcchhhhCCH
Confidence 99999998876
No 84
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.38 E-value=5.8e-13 Score=110.92 Aligned_cols=95 Identities=15% Similarity=0.115 Sum_probs=72.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC--CCcCCCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK--PYKKNGP 228 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~--~~~~~~~ 228 (254)
..+|.+|||||||+|..+..+++..+ .+|++||+++++++.|+++.... ..+++ ++.+|+.. ...++++
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~------~~~~~-~~~~~a~~~~~~~~~~~ 128 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQ------THKVI-PLKGLWEDVAPTLPDGH 128 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGC------SSEEE-EEESCHHHHGGGSCTTC
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhC------CCceE-EEeehHHhhcccccccC
Confidence 46889999999999999999887643 37999999999999999998773 45688 89998763 2234567
Q ss_pred ccEEEecCcC-----cCch---HHHHHHHHhhcC
Q psy425 229 YDVIHFGSGV-----KHIP---IEVSKLCRSQKK 254 (254)
Q Consensus 229 fD~I~~~~~~-----~~~~---~~l~~~lr~lk~ 254 (254)
||.|+..... .+++ ..+.+..|+|||
T Consensus 129 FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkP 162 (236)
T 3orh_A 129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP 162 (236)
T ss_dssp EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred CceEEEeeeecccchhhhcchhhhhhhhhheeCC
Confidence 9999865433 4443 345667788875
No 85
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.38 E-value=5.6e-12 Score=105.51 Aligned_cols=104 Identities=22% Similarity=0.260 Sum_probs=82.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKIS-YPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~v~~~~~~d 218 (254)
...++..+ .+.++.+|||+|||+|.++..+++..++.++|+++|+++++++.|++++..+ + ..+++ +..+|
T Consensus 85 ~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-----~~~v~-~~~~d 156 (258)
T 2pwy_A 85 ASAMVTLL--DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-----VENVR-FHLGK 156 (258)
T ss_dssp HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-----CCCEE-EEESC
T ss_pred HHHHHHHc--CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CCCEE-EEECc
Confidence 55667777 7889999999999999999999998666679999999999999999998874 2 46899 99999
Q ss_pred CCCCCcCCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 219 ARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 219 ~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
+.......++||+|+++. .+....+.+..+.||
T Consensus 157 ~~~~~~~~~~~D~v~~~~--~~~~~~l~~~~~~L~ 189 (258)
T 2pwy_A 157 LEEAELEEAAYDGVALDL--MEPWKVLEKAALALK 189 (258)
T ss_dssp GGGCCCCTTCEEEEEEES--SCGGGGHHHHHHHEE
T ss_pred hhhcCCCCCCcCEEEECC--cCHHHHHHHHHHhCC
Confidence 986533445799999853 333344555556555
No 86
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.38 E-value=5.9e-12 Score=100.27 Aligned_cols=90 Identities=22% Similarity=0.271 Sum_probs=74.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCC--eeEEEEc
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYK--IMDVVEW 217 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~--v~~~~~~ 217 (254)
...+++.+ ...++.+|||+|||+|.++..+++. + .+|+|+|+++.+++.|++++..+ +..+ ++ +..+
T Consensus 41 ~~~l~~~~--~~~~~~~vLdiG~G~G~~~~~~~~~-~--~~v~~~D~~~~~~~~a~~~~~~~-----~~~~~~~~-~~~~ 109 (194)
T 1dus_A 41 TKILVENV--VVDKDDDILDLGCGYGVIGIALADE-V--KSTTMADINRRAIKLAKENIKLN-----NLDNYDIR-VVHS 109 (194)
T ss_dssp HHHHHHHC--CCCTTCEEEEETCTTSHHHHHHGGG-S--SEEEEEESCHHHHHHHHHHHHHT-----TCTTSCEE-EEEC
T ss_pred HHHHHHHc--ccCCCCeEEEeCCCCCHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHc-----CCCccceE-EEEC
Confidence 56677777 6678899999999999999999887 3 37999999999999999999875 3445 99 9999
Q ss_pred CCCCCCcCCCCccEEEecCcCcCc
Q psy425 218 DARKPYKKNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 218 d~~~~~~~~~~fD~I~~~~~~~~~ 241 (254)
|+..... .++||+|+++..+++.
T Consensus 110 d~~~~~~-~~~~D~v~~~~~~~~~ 132 (194)
T 1dus_A 110 DLYENVK-DRKYNKIITNPPIRAG 132 (194)
T ss_dssp STTTTCT-TSCEEEEEECCCSTTC
T ss_pred chhcccc-cCCceEEEECCCcccc
Confidence 9987443 4569999999887653
No 87
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.38 E-value=1.8e-12 Score=115.37 Aligned_cols=108 Identities=15% Similarity=0.044 Sum_probs=82.6
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHH-------hhCCCcccCCCee
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK-------ISYPKLYKLYKIM 212 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~-------~~~~~~~~~~~v~ 212 (254)
...+++.+ .+.++.+|||||||+|.+++.+|...+. .+|+|||+++++++.|+++.+ .++ +...+|+
T Consensus 162 i~~il~~l--~l~~gd~VLDLGCGtG~l~l~lA~~~g~-~kVvGIDiS~~~lelAr~n~e~frkr~~~~G---l~~~rVe 235 (438)
T 3uwp_A 162 VAQMIDEI--KMTDDDLFVDLGSGVGQVVLQVAAATNC-KHHYGVEKADIPAKYAETMDREFRKWMKWYG---KKHAEYT 235 (438)
T ss_dssp HHHHHHHH--CCCTTCEEEEESCTTSHHHHHHHHHCCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHHT---BCCCEEE
T ss_pred HHHHHHhc--CCCCCCEEEEeCCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC---CCCCCeE
Confidence 67777877 7899999999999999999999987643 469999999999999988653 222 1126899
Q ss_pred EEEEcCCCCCCcCC--CCccEEEecCcCc--CchHHHHHHHHhhcC
Q psy425 213 DVVEWDARKPYKKN--GPYDVIHFGSGVK--HIPIEVSKLCRSQKK 254 (254)
Q Consensus 213 ~~~~~d~~~~~~~~--~~fD~I~~~~~~~--~~~~~l~~~lr~lk~ 254 (254)
|+++|+....... ..||+|+++..+. .+...+.+.+++||+
T Consensus 236 -fi~GD~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKP 280 (438)
T 3uwp_A 236 -LERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKE 280 (438)
T ss_dssp -EEECCTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCT
T ss_pred -EEECcccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCC
Confidence 9999998643322 3599999987652 334457777788875
No 88
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.38 E-value=2.1e-12 Score=106.20 Aligned_cols=100 Identities=21% Similarity=0.144 Sum_probs=76.8
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.++++.+|||+|||+|.++..+++.. . +|+|+|+++.+++.+++++...+.......+++ +..+|+.......++|
T Consensus 27 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~ 102 (235)
T 3sm3_A 27 YLQEDDEILDIGCGSGKISLELASKG-Y--SVTGIDINSEAIRLAETAARSPGLNQKTGGKAE-FKVENASSLSFHDSSF 102 (235)
T ss_dssp HCCTTCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEE-EEECCTTSCCSCTTCE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHhCC-C--eEEEEECCHHHHHHHHHHHHhcCCccccCcceE-EEEecccccCCCCCce
Confidence 35688999999999999999999883 3 799999999999999999876431101123688 9999998655556779
Q ss_pred cEEEecCcCcCchH------HHHHHHHhhc
Q psy425 230 DVIHFGSGVKHIPI------EVSKLCRSQK 253 (254)
Q Consensus 230 D~I~~~~~~~~~~~------~l~~~lr~lk 253 (254)
|+|++..+++++++ .+.+..+.||
T Consensus 103 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~ 132 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDPKERSRIIKEVFRVLK 132 (235)
T ss_dssp EEEEEESCGGGCCCHHHHHHHHHHHHHHEE
T ss_pred eEEEEcchhhcCCCHHHHHHHHHHHHHHcC
Confidence 99999999988863 3444445554
No 89
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.38 E-value=1.4e-12 Score=109.58 Aligned_cols=94 Identities=15% Similarity=0.076 Sum_probs=75.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC---CCC
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK---NGP 228 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~---~~~ 228 (254)
.++.+|||||||+|..+..++... +..+|+++|+++.+++.|++++..+ +..+++ ++++|+.+.... .++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-----~l~~v~-~~~~d~~~~~~~~~~~~~ 151 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVL-----GLKGAR-ALWGRAEVLAREAGHREA 151 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHH-----TCSSEE-EEECCHHHHTTSTTTTTC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHh-----CCCceE-EEECcHHHhhcccccCCC
Confidence 468899999999999999999886 5578999999999999999999886 356799 999999753321 367
Q ss_pred ccEEEecCcCcCchHHHHHHHHhhc
Q psy425 229 YDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 229 fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
||+|++..+ ..++..+....+.||
T Consensus 152 fD~I~s~a~-~~~~~ll~~~~~~Lk 175 (249)
T 3g89_A 152 YARAVARAV-APLCVLSELLLPFLE 175 (249)
T ss_dssp EEEEEEESS-CCHHHHHHHHGGGEE
T ss_pred ceEEEECCc-CCHHHHHHHHHHHcC
Confidence 999999864 455555555556665
No 90
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.38 E-value=2.1e-12 Score=108.68 Aligned_cols=88 Identities=13% Similarity=0.150 Sum_probs=72.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+.....++.+|||+|||+|.++..+++.+ . +|+|+|+++.+++.|++++ .+++ ++.+|+
T Consensus 37 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~----------~~~~-~~~~d~ 102 (263)
T 3pfg_A 37 AADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF-G--TVEGLELSADMLAIARRRN----------PDAV-LHHGDM 102 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS-S--EEEEEESCHHHHHHHHHHC----------TTSE-EEECCT
T ss_pred HHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC-C--eEEEEECCHHHHHHHHhhC----------CCCE-EEECCh
Confidence 455566665556678999999999999999998774 3 7999999999999998873 2688 999999
Q ss_pred CCCCcCCCCccEEEecC-cCcCch
Q psy425 220 RKPYKKNGPYDVIHFGS-GVKHIP 242 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~-~~~~~~ 242 (254)
..... .++||+|++.. ++++++
T Consensus 103 ~~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 103 RDFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp TTCCC-SCCEEEEEECTTGGGGSC
T ss_pred HHCCc-cCCcCEEEEcCchhhhcC
Confidence 86444 56799999998 998885
No 91
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.38 E-value=2.6e-12 Score=109.45 Aligned_cols=90 Identities=22% Similarity=0.236 Sum_probs=74.3
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+++.+ ...++.+|||+|||+|.++..+++.. . +|+|+|+++.+++.|++++..++ . +++ +..+|+.
T Consensus 110 ~~~~~~~--~~~~~~~vLD~GcG~G~~~~~l~~~g-~--~v~~vD~s~~~~~~a~~~~~~~~-----~-~~~-~~~~d~~ 177 (286)
T 3m70_A 110 GDVVDAA--KIISPCKVLDLGCGQGRNSLYLSLLG-Y--DVTSWDHNENSIAFLNETKEKEN-----L-NIS-TALYDIN 177 (286)
T ss_dssp HHHHHHH--HHSCSCEEEEESCTTCHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTT-----C-CEE-EEECCGG
T ss_pred HHHHHHh--hccCCCcEEEECCCCCHHHHHHHHCC-C--eEEEEECCHHHHHHHHHHHHHcC-----C-ceE-EEEeccc
Confidence 4445555 34488999999999999999999883 3 79999999999999999998853 3 899 9999998
Q ss_pred CCCcCCCCccEEEecCcCcCchH
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIPI 243 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~~ 243 (254)
.... .++||+|+++.+++++++
T Consensus 178 ~~~~-~~~fD~i~~~~~~~~~~~ 199 (286)
T 3m70_A 178 AANI-QENYDFIVSTVVFMFLNR 199 (286)
T ss_dssp GCCC-CSCEEEEEECSSGGGSCG
T ss_pred cccc-cCCccEEEEccchhhCCH
Confidence 6444 567999999999987743
No 92
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.38 E-value=1.4e-12 Score=108.62 Aligned_cols=109 Identities=18% Similarity=0.203 Sum_probs=83.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+. ...++.+|||||||+|+.+..+++..++.++|+++|+++++++.|++++...+ ..++++ ++.+|+
T Consensus 58 ~~~~l~~l~-~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~-~~~gda 131 (237)
T 3c3y_A 58 AGQLMSFVL-KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG----VEHKIN-FIESDA 131 (237)
T ss_dssp HHHHHHHHH-HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT----CGGGEE-EEESCH
T ss_pred HHHHHHHHH-HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEEcCH
Confidence 344455443 34567899999999999999999987556799999999999999999998864 234699 999998
Q ss_pred CCCCc-------CCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYK-------KNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~-------~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
.+..+ ..++||+|++.....+.+..+.+.++.||+
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~p 173 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKV 173 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEE
T ss_pred HHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCC
Confidence 64221 135799999987766666666666676653
No 93
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.38 E-value=2.3e-12 Score=106.92 Aligned_cols=99 Identities=17% Similarity=0.170 Sum_probs=78.2
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc----CC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK----KN 226 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~----~~ 226 (254)
..++.+|||||||+|+.+..+++..++.++|+++|+++++++.|++++...+ ...+++ ++.+|+.+... ..
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----~~~~i~-~~~~d~~~~l~~l~~~~ 144 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG----VAEKIS-LRLGPALATLEQLTQGK 144 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEE-EEESCHHHHHHHHHTSS
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEEcCHHHHHHHHHhcC
Confidence 3467899999999999999999987546799999999999999999998764 234699 99999753211 12
Q ss_pred --CCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 227 --GPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 227 --~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
++||+|++.......+..+.+.++.||+
T Consensus 145 ~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkp 174 (232)
T 3cbg_A 145 PLPEFDLIFIDADKRNYPRYYEIGLNLLRR 174 (232)
T ss_dssp SCCCEEEEEECSCGGGHHHHHHHHHHTEEE
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHHHcCC
Confidence 5799999988766666667777777664
No 94
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.37 E-value=1.6e-12 Score=109.91 Aligned_cols=90 Identities=14% Similarity=0.174 Sum_probs=69.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++..+ .+. ....++
T Consensus 34 ~~~il~~l--~l~~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~--------~v~-~~~~~~ 99 (261)
T 3iv6_A 34 RENDIFLE--NIVPGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADR--------CVT-IDLLDI 99 (261)
T ss_dssp HHHHHHTT--TCCTTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSS--------CCE-EEECCT
T ss_pred HHHHHHhc--CCCCcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhc--------cce-eeeeec
Confidence 66777777 788999999999999999999998753 6999999999999999987652 233 333333
Q ss_pred CC--CCcCCCCccEEEecCcCcCchH
Q psy425 220 RK--PYKKNGPYDVIHFGSGVKHIPI 243 (254)
Q Consensus 220 ~~--~~~~~~~fD~I~~~~~~~~~~~ 243 (254)
.. .....++||+|+++.++++++.
T Consensus 100 ~~~~~~~~~~~fD~Vv~~~~l~~~~~ 125 (261)
T 3iv6_A 100 TAEIPKELAGHFDFVLNDRLINRFTT 125 (261)
T ss_dssp TSCCCGGGTTCCSEEEEESCGGGSCH
T ss_pred ccccccccCCCccEEEEhhhhHhCCH
Confidence 22 1122457999999999987643
No 95
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=4.7e-12 Score=100.03 Aligned_cols=96 Identities=21% Similarity=0.271 Sum_probs=76.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++ +..+|+|+|+++.+++.|++++..+ +..+++ +.++|+
T Consensus 24 ~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~-~~~~d~ 92 (183)
T 2yxd_A 24 RAVSIGKL--NLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKF-----NIKNCQ-IIKGRA 92 (183)
T ss_dssp HHHHHHHH--CCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHT-----TCCSEE-EEESCH
T ss_pred HHHHHHHc--CCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHc-----CCCcEE-EEECCc
Confidence 56667777 677899999999999999999987 3348999999999999999999885 346899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHH
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLC 249 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~l 249 (254)
.... +.++||+|+++.+ .+.+. +.+.+
T Consensus 93 ~~~~-~~~~~D~i~~~~~-~~~~~-~l~~~ 119 (183)
T 2yxd_A 93 EDVL-DKLEFNKAFIGGT-KNIEK-IIEIL 119 (183)
T ss_dssp HHHG-GGCCCSEEEECSC-SCHHH-HHHHH
T ss_pred cccc-cCCCCcEEEECCc-ccHHH-HHHHH
Confidence 7633 3357999999988 44443 43333
No 96
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.37 E-value=1.1e-12 Score=106.90 Aligned_cols=107 Identities=16% Similarity=0.091 Sum_probs=81.4
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..++..+. ...++.+|||+|||+|+.+..+++...+.++|+++|+++++++.|++++...+ ...+++ ++++|+.
T Consensus 45 ~~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~ 118 (210)
T 3c3p_A 45 GRLLYLLA-RIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG----LIDRVE-LQVGDPL 118 (210)
T ss_dssp HHHHHHHH-HHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS----GGGGEE-EEESCHH
T ss_pred HHHHHHHH-HhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC----CCceEE-EEEecHH
Confidence 33444432 33467899999999999999999887546799999999999999999998753 234699 9999986
Q ss_pred CCC-cCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 221 KPY-KKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 221 ~~~-~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
+.. ...+ ||+|++.......+..+.+..+.||+
T Consensus 119 ~~~~~~~~-fD~v~~~~~~~~~~~~l~~~~~~Lkp 152 (210)
T 3c3p_A 119 GIAAGQRD-IDILFMDCDVFNGADVLERMNRCLAK 152 (210)
T ss_dssp HHHTTCCS-EEEEEEETTTSCHHHHHHHHGGGEEE
T ss_pred HHhccCCC-CCEEEEcCChhhhHHHHHHHHHhcCC
Confidence 421 1235 99999987766777767777777764
No 97
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.37 E-value=3.3e-12 Score=105.23 Aligned_cols=96 Identities=22% Similarity=0.272 Sum_probs=75.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC---cCCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY---KKNG 227 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~---~~~~ 227 (254)
+.++.+|||+|||+|.++..+++..++.++|+|+|+++.+++.+++++.. ..+++ +..+|+.... ...+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-------~~~v~-~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-------RRNIV-PILGDATKPEEYRALVP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-------CTTEE-EEECCTTCGGGGTTTCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-------cCCCE-EEEccCCCcchhhcccC
Confidence 66889999999999999999999876667899999999999999998765 25899 9999997521 1234
Q ss_pred CccEEEecCcCcCchHH-HHHHHHhhcC
Q psy425 228 PYDVIHFGSGVKHIPIE-VSKLCRSQKK 254 (254)
Q Consensus 228 ~fD~I~~~~~~~~~~~~-l~~~lr~lk~ 254 (254)
+||+|++.......... +.+..+.||+
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~Lkp 170 (227)
T 1g8a_A 143 KVDVIFEDVAQPTQAKILIDNAEVYLKR 170 (227)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEE
T ss_pred CceEEEECCCCHhHHHHHHHHHHHhcCC
Confidence 69999988764443344 6666676663
No 98
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.37 E-value=1.1e-12 Score=112.62 Aligned_cols=90 Identities=20% Similarity=0.225 Sum_probs=67.7
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCC-------------------------
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPK------------------------- 204 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~------------------------- 204 (254)
...++.+|||||||+|.++..+++.++ ..+|+|+|+++.+++.|++++...+..
T Consensus 43 ~~~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (292)
T 3g07_A 43 EWFRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVR 121 (292)
T ss_dssp GGTTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC-------------------------------
T ss_pred hhcCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccc
Confidence 344789999999999999999999963 358999999999999999987653200
Q ss_pred ----------------------------cccCCCeeEEEEcCCCCCC-----cCCCCccEEEecCcCcCc
Q psy425 205 ----------------------------LYKLYKIMDVVEWDARKPY-----KKNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 205 ----------------------------~~~~~~v~~~~~~d~~~~~-----~~~~~fD~I~~~~~~~~~ 241 (254)
.....+|+ |.++|+.... ...++||+|++..++.++
T Consensus 122 ~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~-f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~i 190 (292)
T 3g07_A 122 KRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVV-FVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWV 190 (292)
T ss_dssp --------------------CCSSTTCCSSTTTTEE-EEECCCCCSSHHHHTTCCCCEEEEEEESCHHHH
T ss_pred ccccccchhhhccCccccccccccccccccccccce-EEecccccCccccccccCCCcCEEEEChHHHHh
Confidence 00014899 9999997543 245679999999998555
No 99
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.37 E-value=4.2e-12 Score=109.10 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=78.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++++|||||||+|.++..+++.. . +|+++|+++++++.+++++.. .++++ ++++|+
T Consensus 39 ~~~Iv~~l--~~~~~~~VLEIG~G~G~lT~~La~~~-~--~V~aVEid~~li~~a~~~~~~-------~~~v~-vi~gD~ 105 (295)
T 3gru_A 39 VNKAVESA--NLTKDDVVLEIGLGKGILTEELAKNA-K--KVYVIEIDKSLEPYANKLKEL-------YNNIE-IIWGDA 105 (295)
T ss_dssp HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHS-S--EEEEEESCGGGHHHHHHHHHH-------CSSEE-EEESCT
T ss_pred HHHHHHhc--CCCCcCEEEEECCCchHHHHHHHhcC-C--EEEEEECCHHHHHHHHHHhcc-------CCCeE-EEECch
Confidence 77788888 78899999999999999999999984 3 699999999999999999874 35899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHH
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLC 249 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~l 249 (254)
........+||+|+++..+.-..+.+.+.+
T Consensus 106 l~~~~~~~~fD~Iv~NlPy~is~pil~~lL 135 (295)
T 3gru_A 106 LKVDLNKLDFNKVVANLPYQISSPITFKLI 135 (295)
T ss_dssp TTSCGGGSCCSEEEEECCGGGHHHHHHHHH
T ss_pred hhCCcccCCccEEEEeCcccccHHHHHHHH
Confidence 865444456999998876543333344433
No 100
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.37 E-value=2.3e-12 Score=107.78 Aligned_cols=92 Identities=17% Similarity=0.136 Sum_probs=73.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
..++.+|||+|||+|.++..+++.... +|+|+|+++.+++.|+++.. ..+++ +..+|+.......++||
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~--------~~~~~-~~~~d~~~~~~~~~~fD 110 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTT--------SPVVC-YEQKAIEDIAIEPDAYN 110 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCC--------CTTEE-EEECCGGGCCCCTTCEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhc--------cCCeE-EEEcchhhCCCCCCCeE
Confidence 447899999999999999999988532 79999999999999998854 24799 99999986554567799
Q ss_pred EEEecCcCcCchH---HHHHHHHhhc
Q psy425 231 VIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 231 ~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
+|++..+++++++ .+.+..+.||
T Consensus 111 ~v~~~~~l~~~~~~~~~l~~~~~~Lk 136 (253)
T 3g5l_A 111 VVLSSLALHYIASFDDICKKVYINLK 136 (253)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEE
T ss_pred EEEEchhhhhhhhHHHHHHHHHHHcC
Confidence 9999999987753 3444445555
No 101
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.37 E-value=7.2e-13 Score=106.03 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=76.9
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+.......+.+..+|||+|||+|.++..++... +..+|+++|+|+.|++.+++++..+| ...+++ + +|..
T Consensus 37 d~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g----~~~~v~-~--~d~~ 108 (200)
T 3fzg_A 37 NDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLK----TTIKYR-F--LNKE 108 (200)
T ss_dssp HHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSC----CSSEEE-E--ECCH
T ss_pred HHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcC----CCccEE-E--eccc
Confidence 33334433346778999999999999999998774 56699999999999999999998864 122565 5 6665
Q ss_pred CCCcCCCCccEEEecCcCcCchHH---HHHHHHhhc
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIPIE---VSKLCRSQK 253 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~~~---l~~~lr~lk 253 (254)
.. ...++||+|++..++|++++. +.+.++.||
T Consensus 109 ~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~ 143 (200)
T 3fzg_A 109 SD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFH 143 (200)
T ss_dssp HH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCE
T ss_pred cc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhC
Confidence 43 344669999999999988442 445555554
No 102
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.37 E-value=4.3e-12 Score=114.32 Aligned_cols=108 Identities=18% Similarity=0.142 Sum_probs=81.9
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHH-------HHHHHhhCCCcccCCCee
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLF-------MTKLKISYPKLYKLYKIM 212 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a-------~~~~~~~~~~~~~~~~v~ 212 (254)
...+++.+ .+.++.+|||||||+|.++..+++..+. .+|+|+|+++.+++.| ++++...+ +...+++
T Consensus 231 v~~ml~~l--~l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G---l~~~nV~ 304 (433)
T 1u2z_A 231 LSDVYQQC--QLKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEELKKRCKLYG---MRLNNVE 304 (433)
T ss_dssp HHHHHHHT--TCCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHTT---BCCCCEE
T ss_pred HHHHHHhc--CCCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC---CCCCceE
Confidence 67788877 7889999999999999999999998643 4799999999999999 88877742 1146899
Q ss_pred EEEEcCCCC-CCc---CCCCccEEEecCcC--cCchHHHHHHHHhhcC
Q psy425 213 DVVEWDARK-PYK---KNGPYDVIHFGSGV--KHIPIEVSKLCRSQKK 254 (254)
Q Consensus 213 ~~~~~d~~~-~~~---~~~~fD~I~~~~~~--~~~~~~l~~~lr~lk~ 254 (254)
++++|... ... ..++||+|+++..+ +.++..+.+.++.||+
T Consensus 305 -~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKp 351 (433)
T 1u2z_A 305 -FSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKV 351 (433)
T ss_dssp -EEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCT
T ss_pred -EEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCC
Confidence 99986542 211 23579999997655 3444556677777764
No 103
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.36 E-value=2.7e-12 Score=104.41 Aligned_cols=89 Identities=25% Similarity=0.291 Sum_probs=71.2
Q ss_pred hcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCC
Q psy425 149 DKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGP 228 (254)
Q Consensus 149 ~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~ 228 (254)
..+.++.+|||+|||+|.++..+++.. . +|+|+|+++.+++.+++++ ++. +..+|+.... ..++
T Consensus 39 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~-----------~~~-~~~~d~~~~~-~~~~ 102 (211)
T 3e23_A 39 GELPAGAKILELGCGAGYQAEAMLAAG-F--DVDATDGSPELAAEASRRL-----------GRP-VRTMLFHQLD-AIDA 102 (211)
T ss_dssp TTSCTTCEEEESSCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHH-----------TSC-CEECCGGGCC-CCSC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHcC-C--eEEEECCCHHHHHHHHHhc-----------CCc-eEEeeeccCC-CCCc
Confidence 356788999999999999999999873 3 7999999999999999885 356 7888887644 5567
Q ss_pred ccEEEecCcCcCchH-----HHHHHHHhhc
Q psy425 229 YDVIHFGSGVKHIPI-----EVSKLCRSQK 253 (254)
Q Consensus 229 fD~I~~~~~~~~~~~-----~l~~~lr~lk 253 (254)
||+|+++.++++++. .+.+..+.||
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 132 (211)
T 3e23_A 103 YDAVWAHACLLHVPRDELADVLKLIWRALK 132 (211)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEE
T ss_pred EEEEEecCchhhcCHHHHHHHHHHHHHhcC
Confidence 999999999998872 2444445554
No 104
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.36 E-value=5.5e-12 Score=103.34 Aligned_cols=96 Identities=15% Similarity=0.093 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--cCCCCc
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY--KKNGPY 229 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~--~~~~~f 229 (254)
.++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++..+ +..|++ ++++|+.... ...+.|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~-----~~~nv~-~~~~d~~~l~~~~~~~~~ 109 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDS-----EAQNVK-LLNIDADTLTDVFEPGEV 109 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHS-----CCSSEE-EECCCGGGHHHHCCTTSC
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHc-----CCCCEE-EEeCCHHHHHhhcCcCCc
Confidence 467899999999999999999985 5568999999999999999999875 356899 9999997532 234569
Q ss_pred cEEEecCcCcC-----------chHHHHHHHHhhcC
Q psy425 230 DVIHFGSGVKH-----------IPIEVSKLCRSQKK 254 (254)
Q Consensus 230 D~I~~~~~~~~-----------~~~~l~~~lr~lk~ 254 (254)
|.|+++...+. .+..+.+..+.||+
T Consensus 110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lkp 145 (213)
T 2fca_A 110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGK 145 (213)
T ss_dssp CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCC
Confidence 99998765432 23445556677764
No 105
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.35 E-value=5.7e-12 Score=102.08 Aligned_cols=105 Identities=17% Similarity=0.170 Sum_probs=78.4
Q ss_pred HHHHHHHhhh-cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLSD-KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~-~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d 218 (254)
...+++.+.. ...++.+|||+|||+|..+..++... +..+|+++|+++.+++.|++++..+ +..+++ +.++|
T Consensus 51 ~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~v~-~~~~d 123 (207)
T 1jsx_A 51 VRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHEL-----KLENIE-PVQSR 123 (207)
T ss_dssp HHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHT-----TCSSEE-EEECC
T ss_pred HHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHc-----CCCCeE-EEecc
Confidence 4455555521 11257899999999999999999885 4568999999999999999999875 345699 99999
Q ss_pred CCCCCcCCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 219 ARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 219 ~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
+.... ..++||+|+++. +.+.+..+.+..+.||
T Consensus 124 ~~~~~-~~~~~D~i~~~~-~~~~~~~l~~~~~~L~ 156 (207)
T 1jsx_A 124 VEEFP-SEPPFDGVISRA-FASLNDMVSWCHHLPG 156 (207)
T ss_dssp TTTSC-CCSCEEEEECSC-SSSHHHHHHHHTTSEE
T ss_pred hhhCC-ccCCcCEEEEec-cCCHHHHHHHHHHhcC
Confidence 98644 345799999765 4555555555555554
No 106
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.35 E-value=4.6e-12 Score=106.75 Aligned_cols=82 Identities=15% Similarity=0.226 Sum_probs=68.8
Q ss_pred cCC-CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc--CC
Q psy425 150 KLL-PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK--KN 226 (254)
Q Consensus 150 ~~~-~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~--~~ 226 (254)
.+. ++.+|||+|||+|.++..+++.... +|+|+|+++.+++.|++++..++ ...+++ ++++|+..... ..
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~----~~~~v~-~~~~D~~~~~~~~~~ 117 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQ----LEDQIE-IIEYDLKKITDLIPK 117 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTT----CTTTEE-EECSCGGGGGGTSCT
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCC----CcccEE-EEECcHHHhhhhhcc
Confidence 667 8999999999999999999988532 89999999999999999998864 345799 99999985432 25
Q ss_pred CCccEEEecCcC
Q psy425 227 GPYDVIHFGSGV 238 (254)
Q Consensus 227 ~~fD~I~~~~~~ 238 (254)
++||+|+++..+
T Consensus 118 ~~fD~Ii~npPy 129 (259)
T 3lpm_A 118 ERADIVTCNPPY 129 (259)
T ss_dssp TCEEEEEECCCC
T ss_pred CCccEEEECCCC
Confidence 679999998665
No 107
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.35 E-value=2e-12 Score=107.06 Aligned_cols=92 Identities=18% Similarity=0.021 Sum_probs=71.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEE
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVI 232 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I 232 (254)
++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|++++...+ ...+++ +..+|+.... ...+||+|
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~-~~~~fD~v 136 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSP----KAEYFS-FVKEDVFTWR-PTELFDLI 136 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSG----GGGGEE-EECCCTTTCC-CSSCEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccC----CCcceE-EEECchhcCC-CCCCeeEE
Confidence 3459999999999999988754 3479999999999999999987632 345799 9999998754 34479999
Q ss_pred EecCcCcCchH-----HHHHHHHhhc
Q psy425 233 HFGSGVKHIPI-----EVSKLCRSQK 253 (254)
Q Consensus 233 ~~~~~~~~~~~-----~l~~~lr~lk 253 (254)
++..+++++++ .+.+..+.||
T Consensus 137 ~~~~~l~~~~~~~~~~~l~~~~~~Lk 162 (235)
T 3lcc_A 137 FDYVFFCAIEPEMRPAWAKSMYELLK 162 (235)
T ss_dssp EEESSTTTSCGGGHHHHHHHHHHHEE
T ss_pred EEChhhhcCCHHHHHHHHHHHHHHCC
Confidence 99999988762 2444445554
No 108
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.35 E-value=1.6e-12 Score=105.55 Aligned_cols=91 Identities=18% Similarity=0.170 Sum_probs=70.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccC--CCeeEEEEc
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKL--YKIMDVVEW 217 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~--~~v~~~~~~ 217 (254)
...+++.+.. ..++.+|||+|||+|.++..++.... .+|+|+|+++++++.|++++..++ . .+++ ++++
T Consensus 41 ~~~l~~~l~~-~~~~~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~-----~~~~~v~-~~~~ 111 (201)
T 2ift_A 41 KETLFNWLMP-YIHQSECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLK-----CSSEQAE-VINQ 111 (201)
T ss_dssp HHHHHHHHHH-HHTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTT-----CCTTTEE-EECS
T ss_pred HHHHHHHHHH-hcCCCeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhC-----CCccceE-EEEC
Confidence 4445555521 12678999999999999998776643 479999999999999999998853 3 6899 9999
Q ss_pred CCCCCCc--CCCC-ccEEEecCcCc
Q psy425 218 DARKPYK--KNGP-YDVIHFGSGVK 239 (254)
Q Consensus 218 d~~~~~~--~~~~-fD~I~~~~~~~ 239 (254)
|+..... ..++ ||+|+++..+.
T Consensus 112 d~~~~~~~~~~~~~fD~I~~~~~~~ 136 (201)
T 2ift_A 112 SSLDFLKQPQNQPHFDVVFLDPPFH 136 (201)
T ss_dssp CHHHHTTSCCSSCCEEEEEECCCSS
T ss_pred CHHHHHHhhccCCCCCEEEECCCCC
Confidence 9874332 2467 99999998753
No 109
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.35 E-value=3.8e-12 Score=101.18 Aligned_cols=92 Identities=14% Similarity=0.187 Sum_probs=71.2
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+. ...++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++..++ ..++++ ++++|+
T Consensus 32 ~~~~~~~l~-~~~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~-~~~~d~ 103 (187)
T 2fhp_A 32 KESIFNMIG-PYFDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITK----EPEKFE-VRKMDA 103 (187)
T ss_dssp HHHHHHHHC-SCCSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHT----CGGGEE-EEESCH
T ss_pred HHHHHHHHH-hhcCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhC----CCcceE-EEECcH
Confidence 455555552 34578899999999999999888753 3489999999999999999998863 235799 999998
Q ss_pred CCCCc----CCCCccEEEecCcCc
Q psy425 220 RKPYK----KNGPYDVIHFGSGVK 239 (254)
Q Consensus 220 ~~~~~----~~~~fD~I~~~~~~~ 239 (254)
..... ..++||+|+++..+.
T Consensus 104 ~~~~~~~~~~~~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 104 NRALEQFYEEKLQFDLVLLDPPYA 127 (187)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCGG
T ss_pred HHHHHHHHhcCCCCCEEEECCCCC
Confidence 75322 145799999998753
No 110
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.35 E-value=5e-12 Score=107.49 Aligned_cols=103 Identities=21% Similarity=0.236 Sum_probs=75.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKIS-YPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~v~~~~~~d 218 (254)
...+++.+ .+.++.+|||+|||+|.++..+++...+.++|+++|+++++++.|++++..+ + ..+++ +..+|
T Consensus 99 ~~~~~~~~--~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-----~~~v~-~~~~d 170 (275)
T 1yb2_A 99 ASYIIMRC--GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-----IGNVR-TSRSD 170 (275)
T ss_dssp -------C--CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-----CTTEE-EECSC
T ss_pred HHHHHHHc--CCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCcEE-EEECc
Confidence 44556666 6788999999999999999999998545568999999999999999998874 2 46899 99999
Q ss_pred CCCCCcCCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 219 ARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 219 ~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
+.... ..++||+|+++. ++....+.+..+.||
T Consensus 171 ~~~~~-~~~~fD~Vi~~~--~~~~~~l~~~~~~Lk 202 (275)
T 1yb2_A 171 IADFI-SDQMYDAVIADI--PDPWNHVQKIASMMK 202 (275)
T ss_dssp TTTCC-CSCCEEEEEECC--SCGGGSHHHHHHTEE
T ss_pred hhccC-cCCCccEEEEcC--cCHHHHHHHHHHHcC
Confidence 98743 345799999943 333344555555555
No 111
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=2.2e-12 Score=108.76 Aligned_cols=97 Identities=18% Similarity=0.121 Sum_probs=75.9
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||||||+|.++..+++. ..+|+|+|+++.+++.|+++ .+++ +.++|+
T Consensus 23 ~~~l~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----------~~~~-~~~~d~ 85 (261)
T 3ege_A 23 VNAIINLL--NLPKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSIVMRQQAVVH-----------PQVE-WFTGYA 85 (261)
T ss_dssp HHHHHHHH--CCCTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCHHHHHSSCCC-----------TTEE-EECCCT
T ss_pred HHHHHHHh--CCCCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCHHHHHHHHhc-----------cCCE-EEECch
Confidence 56666766 6678999999999999999999873 34899999999998876554 1788 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
.......++||+|++..+++++++ .+.+..+.||
T Consensus 86 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk 122 (261)
T 3ege_A 86 ENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR 122 (261)
T ss_dssp TSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC
T ss_pred hhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC
Confidence 865555677999999999987754 3444445543
No 112
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=1e-11 Score=105.60 Aligned_cols=96 Identities=18% Similarity=0.177 Sum_probs=79.0
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.++.+|||+|||+|.++..+++.++ .++|+|+|+++.+++.|++|++.+ +..+++ ++.+|+... +..++|
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n-----~l~~~~-~~~~d~~~~-~~~~~~ 187 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLN-----KLNNVI-PILADNRDV-ELKDVA 187 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHT-----TCSSEE-EEESCGGGC-CCTTCE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHc-----CCCCEE-EEECChHHc-CccCCc
Confidence 577899999999999999999999864 458999999999999999999986 356899 999999865 335579
Q ss_pred cEEEecCcCcCchHHHHHHHHhhcC
Q psy425 230 DVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 230 D~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
|+|+++... .....+.+.++.||+
T Consensus 188 D~Vi~d~p~-~~~~~l~~~~~~Lkp 211 (272)
T 3a27_A 188 DRVIMGYVH-KTHKFLDKTFEFLKD 211 (272)
T ss_dssp EEEEECCCS-SGGGGHHHHHHHEEE
T ss_pred eEEEECCcc-cHHHHHHHHHHHcCC
Confidence 999998765 455556666676653
No 113
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.34 E-value=8.1e-12 Score=108.45 Aligned_cols=88 Identities=16% Similarity=0.140 Sum_probs=73.0
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+...+ .+.++.+|||+|||+|..+..+++..+..++|+|+|+++.+++.+++++..+ +..+++ ++++|+.
T Consensus 108 ~l~~~~l--~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~-----g~~~v~-~~~~D~~ 179 (315)
T 1ixk_A 108 MYPPVAL--DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL-----GVLNVI-LFHSSSL 179 (315)
T ss_dssp HHHHHHH--CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH-----TCCSEE-EESSCGG
T ss_pred HHHHHHh--CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh-----CCCeEE-EEECChh
Confidence 3344555 7889999999999999999999998765679999999999999999999886 356899 9999997
Q ss_pred CCCcCCCCccEEEecC
Q psy425 221 KPYKKNGPYDVIHFGS 236 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~ 236 (254)
......++||+|+++.
T Consensus 180 ~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 180 HIGELNVEFDKILLDA 195 (315)
T ss_dssp GGGGGCCCEEEEEEEC
T ss_pred hcccccccCCEEEEeC
Confidence 5433345799999854
No 114
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.34 E-value=1.7e-12 Score=110.88 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=79.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+...+ ...++.+|||||||+|..+..+++.. . +|+|+|+|+.+++.|+++....+.. ....++. +..+|+
T Consensus 46 ~~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~-~~~~d~ 118 (293)
T 3thr_A 46 KAWLLGLL--RQHGCHRVLDVACGTGVDSIMLVEEG-F--SVTSVDASDKMLKYALKERWNRRKE-PAFDKWV-IEEANW 118 (293)
T ss_dssp HHHHHHHH--HHTTCCEEEETTCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTTTS-HHHHTCE-EEECCG
T ss_pred HHHHHHHh--cccCCCEEEEecCCCCHHHHHHHHCC-C--eEEEEECCHHHHHHHHHhhhhcccc-cccceee-EeecCh
Confidence 45556666 45678999999999999999999884 3 7999999999999999987442100 1234788 899998
Q ss_pred CCCC---cCCCCccEEEec-CcCcCchH----------HHHHHHHhhcC
Q psy425 220 RKPY---KKNGPYDVIHFG-SGVKHIPI----------EVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~---~~~~~fD~I~~~-~~~~~~~~----------~l~~~lr~lk~ 254 (254)
.... ...++||+|++. .+++|+++ .+.+..+.|||
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp 167 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP 167 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE
T ss_pred hhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC
Confidence 7533 345679999998 78887765 35555566653
No 115
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.34 E-value=6.3e-12 Score=103.98 Aligned_cols=95 Identities=21% Similarity=0.194 Sum_probs=71.5
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC----CCcC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK----PYKK 225 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~----~~~~ 225 (254)
.+.++.+|||+|||+|.++..+++..+ .++|+|+|+++++++.|++++.. ..++. ++.+|+.. ....
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~-------~~~v~-~~~~d~~~~~~~~~~~ 141 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAE-------RENII-PILGDANKPQEYANIV 141 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTT-------CTTEE-EEECCTTCGGGGTTTS
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhc-------CCCeE-EEECCCCCcccccccC
Confidence 456889999999999999999999975 56899999999999999998765 26899 99999976 3333
Q ss_pred CCCccEEEecCcCcCc-hHHHHHHHHhhcC
Q psy425 226 NGPYDVIHFGSGVKHI-PIEVSKLCRSQKK 254 (254)
Q Consensus 226 ~~~fD~I~~~~~~~~~-~~~l~~~lr~lk~ 254 (254)
++||+|+....-... ...+.+..+.||+
T Consensus 142 -~~~D~v~~~~~~~~~~~~~l~~~~~~Lkp 170 (230)
T 1fbn_A 142 -EKVDVIYEDVAQPNQAEILIKNAKWFLKK 170 (230)
T ss_dssp -CCEEEEEECCCSTTHHHHHHHHHHHHEEE
T ss_pred -ccEEEEEEecCChhHHHHHHHHHHHhCCC
Confidence 579999954321111 2225555566653
No 116
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.34 E-value=2.2e-12 Score=106.22 Aligned_cols=107 Identities=18% Similarity=0.171 Sum_probs=81.6
Q ss_pred HHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC
Q psy425 142 ACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK 221 (254)
Q Consensus 142 ~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~ 221 (254)
.++..+. ...++.+|||+|||+|..+..+++..++.++|+++|+++++++.|++++..++ ...+++ ++.+|+.+
T Consensus 59 ~~l~~l~-~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g----~~~~i~-~~~~d~~~ 132 (229)
T 2avd_A 59 QLLANLA-RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE----AEHKID-LRLKPALE 132 (229)
T ss_dssp HHHHHHH-HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT----CTTTEE-EEESCHHH
T ss_pred HHHHHHH-HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC----CCCeEE-EEEcCHHH
Confidence 3344433 45678899999999999999999886545799999999999999999998864 236899 99999864
Q ss_pred CCcC---C---CCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 222 PYKK---N---GPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 222 ~~~~---~---~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
.... . ++||+|++..........+.+.++.||+
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~p 171 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRP 171 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEE
T ss_pred HHHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCC
Confidence 2211 1 5799999988766666666666676653
No 117
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.34 E-value=2.1e-12 Score=102.12 Aligned_cols=91 Identities=14% Similarity=0.217 Sum_probs=71.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+. ...++.+|||+|||+|.++..+++.. ..+|+|+|+++++++.|++++..++ ...+++ ++.+|+
T Consensus 19 ~~~~~~~l~-~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~-~~~~d~ 90 (177)
T 2esr_A 19 RGAIFNMIG-PYFNGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTK----AENRFT-LLKMEA 90 (177)
T ss_dssp HHHHHHHHC-SCCCSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTT----CGGGEE-EECSCH
T ss_pred HHHHHHHHH-hhcCCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcC----CCCceE-EEECcH
Confidence 556666662 25678999999999999999998873 2489999999999999999998753 224799 999998
Q ss_pred CCCC-cCCCCccEEEecCcC
Q psy425 220 RKPY-KKNGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~-~~~~~fD~I~~~~~~ 238 (254)
.... ...+.||+|+++..+
T Consensus 91 ~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 91 ERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp HHHHHHBCSCEEEEEECCSS
T ss_pred HHhHHhhcCCCCEEEECCCC
Confidence 7522 123459999998776
No 118
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.34 E-value=1.8e-12 Score=108.03 Aligned_cols=92 Identities=11% Similarity=0.048 Sum_probs=71.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHH---cCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC----Cc
Q psy425 152 LPGANVLDLGFGSGFMSCCMARM---VGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP----YK 224 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~---~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~----~~ 224 (254)
.++.+|||||||+|+.+..+++. .++.++|+|+|+++++++.|+ . ...+++ ++++|+... ..
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~------~~~~v~-~~~gD~~~~~~l~~~ 148 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----S------DMENIT-LHQGDCSDLTTFEHL 148 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----G------GCTTEE-EEECCSSCSGGGGGG
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----c------cCCceE-EEECcchhHHHHHhh
Confidence 35789999999999999999987 345679999999999998887 1 135899 999999864 22
Q ss_pred CCCCccEEEecCcCcCchHHHHHHHH-hhcC
Q psy425 225 KNGPYDVIHFGSGVKHIPIEVSKLCR-SQKK 254 (254)
Q Consensus 225 ~~~~fD~I~~~~~~~~~~~~l~~~lr-~lk~ 254 (254)
...+||+|++..+..+.+..+.+..+ .||+
T Consensus 149 ~~~~fD~I~~d~~~~~~~~~l~~~~r~~Lkp 179 (236)
T 2bm8_A 149 REMAHPLIFIDNAHANTFNIMKWAVDHLLEE 179 (236)
T ss_dssp SSSCSSEEEEESSCSSHHHHHHHHHHHTCCT
T ss_pred ccCCCCEEEECCchHhHHHHHHHHHHhhCCC
Confidence 33469999998875556666666665 7775
No 119
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.34 E-value=8.5e-12 Score=103.28 Aligned_cols=87 Identities=20% Similarity=0.251 Sum_probs=70.0
Q ss_pred HHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC
Q psy425 143 CLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP 222 (254)
Q Consensus 143 ~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~ 222 (254)
..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+++.+++.|++++... ..+++ +..+|+...
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~------~~~~~-~~~~d~~~~ 91 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMET------NRHVD-FWVQDMREL 91 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHT------TCCCE-EEECCGGGC
T ss_pred HHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhc------CCceE-EEEcChhhc
Confidence 33444445667899999999999999988866 37999999999999999998763 25788 999999764
Q ss_pred CcCCCCccEEEecC-cCcCc
Q psy425 223 YKKNGPYDVIHFGS-GVKHI 241 (254)
Q Consensus 223 ~~~~~~fD~I~~~~-~~~~~ 241 (254)
... ++||+|++.. +++++
T Consensus 92 ~~~-~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 92 ELP-EPVDAITILCDSLNYL 110 (243)
T ss_dssp CCS-SCEEEEEECTTGGGGC
T ss_pred CCC-CCcCEEEEeCCchhhc
Confidence 433 6799999986 78777
No 120
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.34 E-value=5.5e-12 Score=104.42 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=77.1
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+...+ ...++.+|||+|||+|.++..+++... .+|+|+|+++.+++.|+++... .+++ +..+|+.
T Consensus 33 ~~l~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~--------~~~~-~~~~d~~ 99 (243)
T 3bkw_A 33 PALRAML--PEVGGLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPD--------TGIT-YERADLD 99 (243)
T ss_dssp HHHHHHS--CCCTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCS--------SSEE-EEECCGG
T ss_pred HHHHHhc--cccCCCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhccc--------CCce-EEEcChh
Confidence 3445555 556889999999999999999988742 3799999999999999887543 3798 9999998
Q ss_pred CCCcCCCCccEEEecCcCcCchH---HHHHHHHhhc
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
......++||+|++..+++++++ .+.+..+.||
T Consensus 100 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~ 135 (243)
T 3bkw_A 100 KLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALS 135 (243)
T ss_dssp GCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE
T ss_pred hccCCCCCceEEEEeccccccchHHHHHHHHHHhcC
Confidence 64444567999999999987753 3444445554
No 121
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.34 E-value=6.8e-12 Score=103.88 Aligned_cols=91 Identities=16% Similarity=0.138 Sum_probs=73.2
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+.+.+.....++.+|||+|||+|.++..+++.. . +++|+|+++.+++.|++++...+ .+++ +.++|+
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~--~~~~~D~s~~~~~~a~~~~~~~~------~~~~-~~~~d~ 93 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF-K--NTWAVDLSQEMLSEAENKFRSQG------LKPR-LACQDI 93 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS-S--EEEEECSCHHHHHHHHHHHHHTT------CCCE-EECCCG
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC-C--cEEEEECCHHHHHHHHHHHhhcC------CCeE-EEeccc
Confidence 455555553233478899999999999999998873 3 79999999999999999987742 2788 999999
Q ss_pred CCCCcCCCCccEEEecC-cCcCc
Q psy425 220 RKPYKKNGPYDVIHFGS-GVKHI 241 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~-~~~~~ 241 (254)
...... ++||+|++.. +++++
T Consensus 94 ~~~~~~-~~fD~v~~~~~~l~~~ 115 (246)
T 1y8c_A 94 SNLNIN-RKFDLITCCLDSTNYI 115 (246)
T ss_dssp GGCCCS-CCEEEEEECTTGGGGC
T ss_pred ccCCcc-CCceEEEEcCcccccc
Confidence 864434 6799999998 99888
No 122
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.34 E-value=3.7e-12 Score=103.47 Aligned_cols=91 Identities=15% Similarity=0.126 Sum_probs=69.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+... .++.+|||+|||+|.++..++.... .+|+|+|+++++++.|++++..++ ..+++ ++++|+
T Consensus 42 ~~~l~~~l~~~-~~~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~-----~~~v~-~~~~D~ 112 (202)
T 2fpo_A 42 RETLFNWLAPV-IVDAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLK-----AGNAR-VVNSNA 112 (202)
T ss_dssp HHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTT-----CCSEE-EECSCH
T ss_pred HHHHHHHHHhh-cCCCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcC-----CCcEE-EEECCH
Confidence 44455555211 2678999999999999998777643 379999999999999999998863 46899 999998
Q ss_pred CCC-CcCCCCccEEEecCcCc
Q psy425 220 RKP-YKKNGPYDVIHFGSGVK 239 (254)
Q Consensus 220 ~~~-~~~~~~fD~I~~~~~~~ 239 (254)
... ....++||+|+++..++
T Consensus 113 ~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 113 MSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp HHHHSSCCCCEEEEEECCSSS
T ss_pred HHHHhhcCCCCCEEEECCCCC
Confidence 742 22345799999987753
No 123
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.34 E-value=6.8e-13 Score=110.27 Aligned_cols=93 Identities=18% Similarity=-0.025 Sum_probs=73.6
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..++..+. ...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++..++ ...+++ ++++|+.
T Consensus 67 ~~l~~~~~-~~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~-~~~~d~~ 137 (241)
T 3gdh_A 67 EHIAGRVS-QSFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYG----IADKIE-FICGDFL 137 (241)
T ss_dssp HHHHHHHH-HHSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT----CGGGEE-EEESCHH
T ss_pred HHHHHHhh-hccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcC----CCcCeE-EEECChH
Confidence 33344442 33478999999999999999999874 379999999999999999998853 225899 9999998
Q ss_pred CCCcCCCCccEEEecCcCcCchH
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIPI 243 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~~ 243 (254)
... ..++||+|+++.++++...
T Consensus 138 ~~~-~~~~~D~v~~~~~~~~~~~ 159 (241)
T 3gdh_A 138 LLA-SFLKADVVFLSPPWGGPDY 159 (241)
T ss_dssp HHG-GGCCCSEEEECCCCSSGGG
T ss_pred Hhc-ccCCCCEEEECCCcCCcch
Confidence 644 4457999999988876543
No 124
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=1e-11 Score=105.49 Aligned_cols=98 Identities=21% Similarity=0.276 Sum_probs=77.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++..+++. ..+|+|+|+++.+++.++++. .+++ +..+|+
T Consensus 46 ~~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~----------~~~~-~~~~d~ 109 (279)
T 3ccf_A 46 GEDLLQLL--NPQPGEFILDLGCGTGQLTEKIAQS---GAEVLGTDNAATMIEKARQNY----------PHLH-FDVADA 109 (279)
T ss_dssp CCHHHHHH--CCCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC----------TTSC-EEECCT
T ss_pred HHHHHHHh--CCCCCCEEEEecCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHhhC----------CCCE-EEECCh
Confidence 34556666 6778899999999999999999883 348999999999999998764 3688 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH---HHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk~ 254 (254)
..... .++||+|++..+++++++ .+.+..+.|||
T Consensus 110 ~~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkp 146 (279)
T 3ccf_A 110 RNFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKS 146 (279)
T ss_dssp TTCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred hhCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCC
Confidence 86443 467999999999987653 35555566653
No 125
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.33 E-value=4.6e-12 Score=102.34 Aligned_cols=86 Identities=12% Similarity=0.115 Sum_probs=69.7
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEE
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIH 233 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~ 233 (254)
+.+|||+|||+|.++..+++.. . +|+|+|+++.+++.|+++. .+++ ++.+|+.......++||+|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~----------~~~~-~~~~d~~~~~~~~~~fD~v~ 107 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG-H--QIEGLEPATRLVELARQTH----------PSVT-FHHGTITDLSDSPKRWAGLL 107 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT-C--CEEEECCCHHHHHHHHHHC----------TTSE-EECCCGGGGGGSCCCEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC-C--eEEEEeCCHHHHHHHHHhC----------CCCe-EEeCcccccccCCCCeEEEE
Confidence 8899999999999999999884 3 6999999999999998872 3688 99999986544567799999
Q ss_pred ecCcCcCch-----HHHHHHHHhhc
Q psy425 234 FGSGVKHIP-----IEVSKLCRSQK 253 (254)
Q Consensus 234 ~~~~~~~~~-----~~l~~~lr~lk 253 (254)
+..++++++ ..+.+..+.||
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~L~ 132 (203)
T 3h2b_A 108 AWYSLIHMGPGELPDALVALRMAVE 132 (203)
T ss_dssp EESSSTTCCTTTHHHHHHHHHHTEE
T ss_pred ehhhHhcCCHHHHHHHHHHHHHHcC
Confidence 999998886 22444445554
No 126
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.33 E-value=2.1e-11 Score=100.39 Aligned_cols=81 Identities=19% Similarity=0.256 Sum_probs=67.0
Q ss_pred cCCCCCEEEEEcCC-CChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC--CCCcCC
Q psy425 150 KLLPGANVLDLGFG-SGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR--KPYKKN 226 (254)
Q Consensus 150 ~~~~~~~VLDiG~G-~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~--~~~~~~ 226 (254)
.+.++.+|||+||| +|.++..+++.. ..+|+|+|+++.+++.|++++..++ . +++ ++++|+. .... .
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-----~-~v~-~~~~d~~~~~~~~-~ 121 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNN-----S-NVR-LVKSNGGIIKGVV-E 121 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTT-----C-CCE-EEECSSCSSTTTC-C
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhC-----C-CcE-EEeCCchhhhhcc-c
Confidence 56789999999999 999999999985 3479999999999999999998863 3 899 9999974 2222 3
Q ss_pred CCccEEEecCcCcC
Q psy425 227 GPYDVIHFGSGVKH 240 (254)
Q Consensus 227 ~~fD~I~~~~~~~~ 240 (254)
++||+|+++..+.+
T Consensus 122 ~~fD~I~~npp~~~ 135 (230)
T 3evz_A 122 GTFDVIFSAPPYYD 135 (230)
T ss_dssp SCEEEEEECCCCC-
T ss_pred CceeEEEECCCCcC
Confidence 67999999876643
No 127
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.33 E-value=1.1e-11 Score=102.70 Aligned_cols=97 Identities=26% Similarity=0.210 Sum_probs=74.5
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC---cCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY---KKN 226 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~---~~~ 226 (254)
.+.++.+|||+|||+|.++..+++..++.++|+|+|+++.+++.+.+++..+ .+++ +..+|+.... ...
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-------~~v~-~~~~d~~~~~~~~~~~ 145 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-------TNII-PVIEDARHPHKYRMLI 145 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-------TTEE-EECSCTTCGGGGGGGC
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-------CCeE-EEEcccCChhhhcccC
Confidence 4678899999999999999999999765678999999999998888887762 5899 9999998632 234
Q ss_pred CCccEEEecCcCcCchHH-HHHHHHhhcC
Q psy425 227 GPYDVIHFGSGVKHIPIE-VSKLCRSQKK 254 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~~~~-l~~~lr~lk~ 254 (254)
++||+|+++....+.... +.+..+.||+
T Consensus 146 ~~~D~V~~~~~~~~~~~~~~~~~~~~Lkp 174 (233)
T 2ipx_A 146 AMVDVIFADVAQPDQTRIVALNAHTFLRN 174 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEE
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHcCC
Confidence 579999997663222233 3446666663
No 128
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.33 E-value=5.1e-12 Score=104.06 Aligned_cols=80 Identities=14% Similarity=0.137 Sum_probs=67.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC---cCCCC
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY---KKNGP 228 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~---~~~~~ 228 (254)
.++.+|||||||+|.++..+|+.. +...|+|+|+++.+++.|++++..+ +..|++ ++.+|+.... .+.++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~-----~l~nv~-~~~~Da~~~l~~~~~~~~ 105 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEE-----GLSNLR-VMCHDAVEVLHKMIPDNS 105 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHT-----TCSSEE-EECSCHHHHHHHHSCTTC
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHh-----CCCcEE-EEECCHHHHHHHHcCCCC
Confidence 367899999999999999999986 5578999999999999999999875 466899 9999987531 34567
Q ss_pred ccEEEecCcC
Q psy425 229 YDVIHFGSGV 238 (254)
Q Consensus 229 fD~I~~~~~~ 238 (254)
||.|+++...
T Consensus 106 ~d~v~~~~~~ 115 (218)
T 3dxy_A 106 LRMVQLFFPD 115 (218)
T ss_dssp EEEEEEESCC
T ss_pred hheEEEeCCC
Confidence 9999998443
No 129
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.33 E-value=4.1e-12 Score=99.48 Aligned_cols=104 Identities=15% Similarity=0.092 Sum_probs=76.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+...++++.+|||+|||+|.++..+++.. + .|+|+|+++++++.|++++..++ . +++ +.++|+
T Consensus 28 ~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~--~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~-~~~~d~ 97 (171)
T 1ws6_A 28 RKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEG-W--EAVLVEKDPEAVRLLKENVRRTG-----L-GAR-VVALPV 97 (171)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTT-C--EEEEECCCHHHHHHHHHHHHHHT-----C-CCE-EECSCH
T ss_pred HHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCC-C--eEEEEeCCHHHHHHHHHHHHHcC-----C-ceE-EEeccH
Confidence 455566663334478999999999999999999884 4 49999999999999999998853 3 899 999998
Q ss_pred CCCCc----CCCCccEEEecCcC-cCchHHHHHHH--Hhhc
Q psy425 220 RKPYK----KNGPYDVIHFGSGV-KHIPIEVSKLC--RSQK 253 (254)
Q Consensus 220 ~~~~~----~~~~fD~I~~~~~~-~~~~~~l~~~l--r~lk 253 (254)
..... ..++||+|+++..+ ...++.+.... +.||
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~ 138 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYAMDLAALFGELLASGLVE 138 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEE
T ss_pred HHHHHhhhccCCceEEEEECCCCchhHHHHHHHHHhhcccC
Confidence 75221 12369999999776 34444343333 4444
No 130
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.32 E-value=1.4e-11 Score=104.96 Aligned_cols=84 Identities=23% Similarity=0.146 Sum_probs=69.5
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-CCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-KNGP 228 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-~~~~ 228 (254)
.+.++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++...+ ...+++ +.++|+..... ..++
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~~~~~ 133 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMK----RRFKVF-FRAQDSYGRHMDLGKE 133 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSC----CSSEEE-EEESCTTTSCCCCSSC
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcC----CCccEE-EEECCccccccCCCCC
Confidence 46788999999999999999988874 3489999999999999999988743 224689 99999986433 4567
Q ss_pred ccEEEecCcCcC
Q psy425 229 YDVIHFGSGVKH 240 (254)
Q Consensus 229 fD~I~~~~~~~~ 240 (254)
||+|++..++++
T Consensus 134 fD~v~~~~~l~~ 145 (298)
T 1ri5_A 134 FDVISSQFSFHY 145 (298)
T ss_dssp EEEEEEESCGGG
T ss_pred cCEEEECchhhh
Confidence 999999999865
No 131
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.32 E-value=1.6e-12 Score=121.51 Aligned_cols=91 Identities=23% Similarity=0.192 Sum_probs=74.0
Q ss_pred HHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC--
Q psy425 145 QHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP-- 222 (254)
Q Consensus 145 ~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~-- 222 (254)
..+...+..+.+|||||||.|.++..||+++. +|+|||.++.+++.|+..+.+. +..+++ +.++++++.
T Consensus 58 ~~~~~~~~~~~~vLDvGCG~G~~~~~la~~ga---~V~giD~~~~~i~~a~~~a~~~-----~~~~~~-~~~~~~~~~~~ 128 (569)
T 4azs_A 58 DNLSRALGRPLNVLDLGCAQGFFSLSLASKGA---TIVGIDFQQENINVCRALAEEN-----PDFAAE-FRVGRIEEVIA 128 (569)
T ss_dssp HHHHHHHTSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTS-----TTSEEE-EEECCHHHHHH
T ss_pred HHHHhhcCCCCeEEEECCCCcHHHHHHHhCCC---EEEEECCCHHHHHHHHHHHHhc-----CCCceE-EEECCHHHHhh
Confidence 33433455678999999999999999999853 6999999999999999998774 234799 999999753
Q ss_pred CcCCCCccEEEecCcCcCchHH
Q psy425 223 YKKNGPYDVIHFGSGVKHIPIE 244 (254)
Q Consensus 223 ~~~~~~fD~I~~~~~~~~~~~~ 244 (254)
....++||+|++..+++|++++
T Consensus 129 ~~~~~~fD~v~~~e~~ehv~~~ 150 (569)
T 4azs_A 129 ALEEGEFDLAIGLSVFHHIVHL 150 (569)
T ss_dssp HCCTTSCSEEEEESCHHHHHHH
T ss_pred hccCCCccEEEECcchhcCCCH
Confidence 2234579999999999999875
No 132
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.32 E-value=3.8e-12 Score=107.15 Aligned_cols=104 Identities=20% Similarity=0.241 Sum_probs=80.1
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+...+.++.+|||+|||+|.++..+++.+ . +|+|+|+++.+++.|++|+..++ .. ++ +..+|+
T Consensus 107 t~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g-~--~v~gvDi~~~~v~~a~~n~~~~~-----~~-v~-~~~~d~ 176 (254)
T 2nxc_A 107 TRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLG-G--KALGVDIDPMVLPQAEANAKRNG-----VR-PR-FLEGSL 176 (254)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCGGGHHHHHHHHHHTT-----CC-CE-EEESCH
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhC-C--eEEEEECCHHHHHHHHHHHHHcC-----Cc-EE-EEECCh
Confidence 445556654456789999999999999999988864 4 79999999999999999998863 33 88 999998
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
.... ..++||+|+++...+.+...+.+..+.||+
T Consensus 177 ~~~~-~~~~fD~Vv~n~~~~~~~~~l~~~~~~Lkp 210 (254)
T 2nxc_A 177 EAAL-PFGPFDLLVANLYAELHAALAPRYREALVP 210 (254)
T ss_dssp HHHG-GGCCEEEEEEECCHHHHHHHHHHHHHHEEE
T ss_pred hhcC-cCCCCCEEEECCcHHHHHHHHHHHHHHcCC
Confidence 7533 245699999987666665555555566653
No 133
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.32 E-value=1.9e-11 Score=103.93 Aligned_cols=79 Identities=19% Similarity=0.268 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccE
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDV 231 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~ 231 (254)
.++.+|||+|||+|.++..++... +..+|+|+|+|+.+++.|++|+..+ +..+++ ++++|+..... .++||+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~-----~~~~v~-~~~~d~~~~~~-~~~fD~ 179 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHL-----AIKNIH-ILQSDWFSALA-GQQFAM 179 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHH-----TCCSEE-EECCSTTGGGT-TCCEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHc-----CCCceE-EEEcchhhhcc-cCCccE
Confidence 577899999999999999999876 4568999999999999999999886 345899 99999986433 457999
Q ss_pred EEecCcC
Q psy425 232 IHFGSGV 238 (254)
Q Consensus 232 I~~~~~~ 238 (254)
|+++..+
T Consensus 180 Iv~npPy 186 (276)
T 2b3t_A 180 IVSNPPY 186 (276)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998543
No 134
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.32 E-value=1.8e-11 Score=104.77 Aligned_cols=86 Identities=17% Similarity=0.234 Sum_probs=68.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..++.. +..+|+|+|+|+++++.|++|+..++ ...+++ ++++|+
T Consensus 112 v~~~l~~~--~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~----l~~~v~-~~~~D~ 182 (284)
T 1nv8_A 112 VELALELI--RKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHG----VSDRFF-VRKGEF 182 (284)
T ss_dssp HHHHHHHH--HHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTT----CTTSEE-EEESST
T ss_pred HHHHHHHh--cccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcC----CCCceE-EEECcc
Confidence 44445544 2336789999999999999999988 45689999999999999999998863 223599 999999
Q ss_pred CCCCcCCCCc---cEEEecC
Q psy425 220 RKPYKKNGPY---DVIHFGS 236 (254)
Q Consensus 220 ~~~~~~~~~f---D~I~~~~ 236 (254)
..... ++| |+|+++.
T Consensus 183 ~~~~~--~~f~~~D~IvsnP 200 (284)
T 1nv8_A 183 LEPFK--EKFASIEMILSNP 200 (284)
T ss_dssp TGGGG--GGTTTCCEEEECC
T ss_pred hhhcc--cccCCCCEEEEcC
Confidence 86433 358 9999984
No 135
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.31 E-value=1.6e-11 Score=101.38 Aligned_cols=88 Identities=11% Similarity=0.131 Sum_probs=69.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+.+.+.....++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++. .+++ +..+|+
T Consensus 27 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~----------~~~~-~~~~d~ 92 (239)
T 3bxo_A 27 ASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL----------PDAT-LHQGDM 92 (239)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC----------TTCE-EEECCT
T ss_pred HHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC----------CCCE-EEECCH
Confidence 3444555544456789999999999999999999863 6999999999999998863 3688 999999
Q ss_pred CCCCcCCCCccEEEe-cCcCcCch
Q psy425 220 RKPYKKNGPYDVIHF-GSGVKHIP 242 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~-~~~~~~~~ 242 (254)
..... .++||+|++ ..++++++
T Consensus 93 ~~~~~-~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 93 RDFRL-GRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp TTCCC-SSCEEEEEECTTGGGGCC
T ss_pred HHccc-CCCCcEEEEcCchHhhcC
Confidence 86443 557999995 55887773
No 136
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.31 E-value=1.6e-11 Score=104.29 Aligned_cols=104 Identities=20% Similarity=0.254 Sum_probs=80.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+ .+.++.+|||+|||+|.++..+++..++.++|+++|+++++++.|++++..++ ...+++ +..+|+
T Consensus 101 ~~~i~~~~--~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~ 173 (277)
T 1o54_A 101 SSFIAMML--DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG----LIERVT-IKVRDI 173 (277)
T ss_dssp HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT----CGGGEE-EECCCG
T ss_pred HHHHHHHh--CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC----CCCCEE-EEECCH
Confidence 55666766 78899999999999999999999986566799999999999999999998753 225799 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
.... ..++||+|+++.. .....+.+..+.||
T Consensus 174 ~~~~-~~~~~D~V~~~~~--~~~~~l~~~~~~L~ 204 (277)
T 1o54_A 174 SEGF-DEKDVDALFLDVP--DPWNYIDKCWEALK 204 (277)
T ss_dssp GGCC-SCCSEEEEEECCS--CGGGTHHHHHHHEE
T ss_pred HHcc-cCCccCEEEECCc--CHHHHHHHHHHHcC
Confidence 8653 3456999999642 22233445555554
No 137
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.31 E-value=1.4e-11 Score=109.66 Aligned_cols=91 Identities=23% Similarity=0.311 Sum_probs=73.5
Q ss_pred HHHHHHHhhhcC----CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEE
Q psy425 140 QAACLQHLSDKL----LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVV 215 (254)
Q Consensus 140 ~~~~l~~l~~~~----~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 215 (254)
...+++.+...+ .++.+|||+|||+|.++..+++.. . +|+++|+++.+++.|++++..++ .+++ ++
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g-~--~V~gvDis~~al~~A~~n~~~~~------~~v~-~~ 285 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG-A--EVVGVEDDLASVLSLQKGLEANA------LKAQ-AL 285 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTT-C--EEEEEESBHHHHHHHHHHHHHTT------CCCE-EE
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHHcC------CCeE-EE
Confidence 445555554322 378899999999999999999873 3 79999999999999999998853 2488 99
Q ss_pred EcCCCCCCcCCCCccEEEecCcCcC
Q psy425 216 EWDARKPYKKNGPYDVIHFGSGVKH 240 (254)
Q Consensus 216 ~~d~~~~~~~~~~fD~I~~~~~~~~ 240 (254)
++|+.......++||+|+++..+++
T Consensus 286 ~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 286 HSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp ECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred EcchhhccccCCCeEEEEECCchhh
Confidence 9999876555567999999988865
No 138
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.30 E-value=1.8e-11 Score=108.78 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=73.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++..++.. ...+++ +..+|+
T Consensus 211 ~~~ll~~l--~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~--~~~~v~-~~~~D~ 284 (375)
T 4dcm_A 211 ARFFMQHL--PENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPE--ALDRCE-FMINNA 284 (375)
T ss_dssp HHHHHHTC--CCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGG--GGGGEE-EEECST
T ss_pred HHHHHHhC--cccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCC--cCceEE-EEechh
Confidence 44566666 55567899999999999999999985 4568999999999999999999886400 012588 899999
Q ss_pred CCCCcCCCCccEEEecCcCcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKH 240 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~ 240 (254)
.... ..++||+|+++..+++
T Consensus 285 ~~~~-~~~~fD~Ii~nppfh~ 304 (375)
T 4dcm_A 285 LSGV-EPFRFNAVLCNPPFHQ 304 (375)
T ss_dssp TTTC-CTTCEEEEEECCCC--
T ss_pred hccC-CCCCeeEEEECCCccc
Confidence 8754 3456999999988753
No 139
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.30 E-value=2.6e-11 Score=106.38 Aligned_cols=79 Identities=20% Similarity=0.219 Sum_probs=66.1
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.++.+|||||||+|.++..+++... .+|+|+|+++ +++.|++++..++ ..++++ ++.+|+.+...+.++|
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~-~~~~a~~~~~~~~----~~~~i~-~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSE-ILYQAMDIIRLNK----LEDTIT-LIKGKIEEVHLPVEKV 132 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEESST-HHHHHHHHHHHTT----CTTTEE-EEESCTTTSCCSCSCE
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcCC--CEEEEEChHH-HHHHHHHHHHHcC----CCCcEE-EEEeeHHHhcCCCCcE
Confidence 467889999999999999999998742 4899999996 9999999998864 336899 9999998654445679
Q ss_pred cEEEecC
Q psy425 230 DVIHFGS 236 (254)
Q Consensus 230 D~I~~~~ 236 (254)
|+|++..
T Consensus 133 D~Ivs~~ 139 (340)
T 2fyt_A 133 DVIISEW 139 (340)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9999876
No 140
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.29 E-value=1.5e-11 Score=104.71 Aligned_cols=95 Identities=19% Similarity=0.159 Sum_probs=75.6
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+++|.+|||+|||+|.+++.+|..+.. +|+++|++|.+++.+++|++.|+ ..++++ +.++|+.+.. ..+.|
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g~~--~V~avD~np~a~~~~~~N~~~N~----v~~~v~-~~~~D~~~~~-~~~~~ 193 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNK----VEDRMS-AYNMDNRDFP-GENIA 193 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTT----CTTTEE-EECSCTTTCC-CCSCE
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhcCC--eEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEeCcHHHhc-cccCC
Confidence 4678999999999999999999988543 79999999999999999999985 456799 9999998643 44569
Q ss_pred cEEEecCcCcCchHHHHHHHHhhc
Q psy425 230 DVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 230 D~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
|.|+++.... ..+.+..+++.+|
T Consensus 194 D~Vi~~~p~~-~~~~l~~a~~~lk 216 (278)
T 3k6r_A 194 DRILMGYVVR-THEFIPKALSIAK 216 (278)
T ss_dssp EEEEECCCSS-GGGGHHHHHHHEE
T ss_pred CEEEECCCCc-HHHHHHHHHHHcC
Confidence 9999986432 2233555556555
No 141
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.28 E-value=1.3e-11 Score=104.31 Aligned_cols=83 Identities=17% Similarity=0.187 Sum_probs=68.3
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHh---hCCCcccCCCeeEEEEcCCCCCC---
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKI---SYPKLYKLYKIMDVVEWDARKPY--- 223 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~---~~~~~~~~~~v~~~~~~d~~~~~--- 223 (254)
...++.+|||+|||+|.++..++++. +..+|+|+|+++++++.|++|+.. ++ ..++++ ++++|+....
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~----l~~~v~-~~~~D~~~~~~~~ 106 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAA----FSARIE-VLEADVTLRAKAR 106 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTT----TGGGEE-EEECCTTCCHHHH
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCC----CcceEE-EEeCCHHHHhhhh
Confidence 56678899999999999999999986 446899999999999999999876 53 234699 9999998642
Q ss_pred ----cCCCCccEEEecCcC
Q psy425 224 ----KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 ----~~~~~fD~I~~~~~~ 238 (254)
...++||+|+++..+
T Consensus 107 ~~~~~~~~~fD~Vv~nPPy 125 (260)
T 2ozv_A 107 VEAGLPDEHFHHVIMNPPY 125 (260)
T ss_dssp HHTTCCTTCEEEEEECCCC
T ss_pred hhhccCCCCcCEEEECCCC
Confidence 234579999998554
No 142
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.28 E-value=1.8e-11 Score=98.67 Aligned_cols=77 Identities=21% Similarity=0.113 Sum_probs=63.6
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.++ +|||+|||+|.++..+++.. . +|+|+|+++.+++.|++++...+ .+++ +..+|+.......++|
T Consensus 27 ~~~~~-~vLdiGcG~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~------~~~~-~~~~d~~~~~~~~~~f 95 (202)
T 2kw5_A 27 QIPQG-KILCLAEGEGRNACFLASLG-Y--EVTAVDQSSVGLAKAKQLAQEKG------VKIT-TVQSNLADFDIVADAW 95 (202)
T ss_dssp HSCSS-EEEECCCSCTHHHHHHHTTT-C--EEEEECSSHHHHHHHHHHHHHHT------CCEE-EECCBTTTBSCCTTTC
T ss_pred hCCCC-CEEEECCCCCHhHHHHHhCC-C--eEEEEECCHHHHHHHHHHHHhcC------CceE-EEEcChhhcCCCcCCc
Confidence 35567 99999999999999988763 3 79999999999999999988742 3799 9999998654455679
Q ss_pred cEEEecCc
Q psy425 230 DVIHFGSG 237 (254)
Q Consensus 230 D~I~~~~~ 237 (254)
|+|++...
T Consensus 96 D~v~~~~~ 103 (202)
T 2kw5_A 96 EGIVSIFC 103 (202)
T ss_dssp SEEEEECC
T ss_pred cEEEEEhh
Confidence 99998643
No 143
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.28 E-value=7.2e-11 Score=98.11 Aligned_cols=103 Identities=16% Similarity=0.147 Sum_probs=79.9
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...++..+ .+.++.+|||+|||+|.++..+++. + .+|+++|+++++++.|+++...++ ...+++ +..+|+
T Consensus 80 ~~~~~~~~--~~~~~~~vldiG~G~G~~~~~l~~~-~--~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~-~~~~d~ 149 (248)
T 2yvl_A 80 SFYIALKL--NLNKEKRVLEFGTGSGALLAVLSEV-A--GEVWTFEAVEEFYKTAQKNLKKFN----LGKNVK-FFNVDF 149 (248)
T ss_dssp HHHHHHHT--TCCTTCEEEEECCTTSHHHHHHHHH-S--SEEEEECSCHHHHHHHHHHHHHTT----CCTTEE-EECSCT
T ss_pred HHHHHHhc--CCCCCCEEEEeCCCccHHHHHHHHh-C--CEEEEEecCHHHHHHHHHHHHHcC----CCCcEE-EEEcCh
Confidence 55666666 6788999999999999999999988 3 389999999999999999988753 236899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
.......+.||+|+++.. +....+.+..+.||+
T Consensus 150 ~~~~~~~~~~D~v~~~~~--~~~~~l~~~~~~L~~ 182 (248)
T 2yvl_A 150 KDAEVPEGIFHAAFVDVR--EPWHYLEKVHKSLME 182 (248)
T ss_dssp TTSCCCTTCBSEEEECSS--CGGGGHHHHHHHBCT
T ss_pred hhcccCCCcccEEEECCc--CHHHHHHHHHHHcCC
Confidence 875424456999998643 333445566666664
No 144
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.28 E-value=8.4e-12 Score=97.93 Aligned_cols=93 Identities=16% Similarity=0.196 Sum_probs=73.1
Q ss_pred HHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC
Q psy425 142 ACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK 221 (254)
Q Consensus 142 ~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~ 221 (254)
.+++.+ .+.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++ .++++ +..+| .
T Consensus 8 ~~~~~~--~~~~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~----------~~~v~-~~~~d--~ 69 (170)
T 3i9f_A 8 EYLPNI--FEGKKGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEK----------FDSVI-TLSDP--K 69 (170)
T ss_dssp TTHHHH--HSSCCEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHH----------CTTSE-EESSG--G
T ss_pred HHHHhc--CcCCCCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHh----------CCCcE-EEeCC--C
Confidence 345666 677899999999999999999998862 799999999999999887 13788 99999 2
Q ss_pred CCcCCCCccEEEecCcCcCchH---HHHHHHHhhc
Q psy425 222 PYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 222 ~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
....++||+|+++.+++++++ .+.+..+.||
T Consensus 70 -~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~ 103 (170)
T 3i9f_A 70 -EIPDNSVDFILFANSFHDMDDKQHVISEVKRILK 103 (170)
T ss_dssp -GSCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEE
T ss_pred -CCCCCceEEEEEccchhcccCHHHHHHHHHHhcC
Confidence 233457999999999988753 3444445554
No 145
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.27 E-value=1.7e-11 Score=105.67 Aligned_cols=97 Identities=20% Similarity=0.174 Sum_probs=72.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.+++++..+ +..+++ ++++|+
T Consensus 31 ~~~i~~~~--~~~~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~-----~~~~v~-~~~~D~ 99 (299)
T 2h1r_A 31 LDKIIYAA--KIKSSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYE-----GYNNLE-VYEGDA 99 (299)
T ss_dssp HHHHHHHH--CCCTTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHT-----TCCCEE-C----C
T ss_pred HHHHHHhc--CCCCcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHc-----CCCceE-EEECch
Confidence 67777777 77889999999999999999998773 37999999999999999998764 346899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHH
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLC 249 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~l 249 (254)
..... .+||+|+++.......+.+.+.+
T Consensus 100 ~~~~~--~~~D~Vv~n~py~~~~~~~~~ll 127 (299)
T 2h1r_A 100 IKTVF--PKFDVCTANIPYKISSPLIFKLI 127 (299)
T ss_dssp CSSCC--CCCSEEEEECCGGGHHHHHHHHH
T ss_pred hhCCc--ccCCEEEEcCCcccccHHHHHHH
Confidence 76432 36999999876654333333333
No 146
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.27 E-value=8.5e-12 Score=102.01 Aligned_cols=109 Identities=17% Similarity=0.079 Sum_probs=75.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
....++.+ .+.++.+|||+|||+|.++..+++.. +..+|+|+|++++|++.+.+++.++- ......+++ ++++|+
T Consensus 16 ~~~~~~~l--~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~-~~~~~~~v~-~~~~d~ 90 (218)
T 3mq2_A 16 SDAEFEQL--RSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKP-AKGGLPNLL-YLWATA 90 (218)
T ss_dssp CHHHHHHH--HTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCG-GGTCCTTEE-EEECCS
T ss_pred CHHHHHHh--hccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhh-hhcCCCceE-EEecch
Confidence 34556666 67789999999999999999999985 45689999999998886443332210 001355899 999999
Q ss_pred CCCCcCCCCccEEEecCcCc-----C---chHHHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVK-----H---IPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~-----~---~~~~l~~~lr~lk~ 254 (254)
.......+. |.|++..... + .+..+.+..+.|||
T Consensus 91 ~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 132 (218)
T 3mq2_A 91 ERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRP 132 (218)
T ss_dssp TTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEE
T ss_pred hhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCC
Confidence 875444444 7777544332 2 25556677777764
No 147
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.27 E-value=2.8e-11 Score=103.62 Aligned_cols=98 Identities=20% Similarity=0.156 Sum_probs=77.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++..+++... +|+|+|+++.+++.+++++...+ ...+++ ++++|+
T Consensus 17 ~~~i~~~~--~~~~~~~VLDiG~G~G~lt~~L~~~~~---~v~~vD~~~~~~~~a~~~~~~~~----~~~~v~-~~~~D~ 86 (285)
T 1zq9_A 17 INSIIDKA--ALRPTDVVLEVGPGTGNMTVKLLEKAK---KVVACELDPRLVAELHKRVQGTP----VASKLQ-VLVGDV 86 (285)
T ss_dssp HHHHHHHT--CCCTTCEEEEECCTTSTTHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTST----TGGGEE-EEESCT
T ss_pred HHHHHHhc--CCCCCCEEEEEcCcccHHHHHHHhhCC---EEEEEECCHHHHHHHHHHHHhcC----CCCceE-EEEcce
Confidence 67778877 778899999999999999999999853 79999999999999999986532 125799 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHH
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLC 249 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~l 249 (254)
..... ..||+|+++..+....+.+...+
T Consensus 87 ~~~~~--~~fD~vv~nlpy~~~~~~~~~~l 114 (285)
T 1zq9_A 87 LKTDL--PFFDTCVANLPYQISSPFVFKLL 114 (285)
T ss_dssp TTSCC--CCCSEEEEECCGGGHHHHHHHHH
T ss_pred ecccc--hhhcEEEEecCcccchHHHHHHH
Confidence 85432 25999999877654444443443
No 148
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.27 E-value=2.2e-11 Score=107.21 Aligned_cols=97 Identities=13% Similarity=0.071 Sum_probs=73.3
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.++.+|||+|||+|.++..+++.. ..+|+|+|++ ++++.|++++..++ ...+++ ++.+|+.....+.++|
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s-~~l~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~~~~f 134 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECS-SISDYAVKIVKANK----LDHVVT-IIKGKVEEVELPVEKV 134 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECS-THHHHHHHHHHHTT----CTTTEE-EEESCTTTCCCSSSCE
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCC--CCEEEEECcH-HHHHHHHHHHHHcC----CCCcEE-EEECcHHHccCCCCce
Confidence 34578999999999999999999883 2489999999 59999999998864 334599 9999998755555679
Q ss_pred cEEEecCcC-----cCchHHHH-HHHHhhcC
Q psy425 230 DVIHFGSGV-----KHIPIEVS-KLCRSQKK 254 (254)
Q Consensus 230 D~I~~~~~~-----~~~~~~l~-~~lr~lk~ 254 (254)
|+|++..+. ....+.+. +..+.|||
T Consensus 135 D~Iis~~~~~~l~~~~~~~~~l~~~~r~Lkp 165 (349)
T 3q7e_A 135 DIIISEWMGYCLFYESMLNTVLHARDKWLAP 165 (349)
T ss_dssp EEEEECCCBBTBTBTCCHHHHHHHHHHHEEE
T ss_pred EEEEEccccccccCchhHHHHHHHHHHhCCC
Confidence 999997542 22333343 33466653
No 149
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.27 E-value=4.8e-11 Score=105.05 Aligned_cols=91 Identities=26% Similarity=0.116 Sum_probs=75.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
.+.++..+ ...++.+|||+|||+|.++..++...++..+++|+|+++.+++.|++|+..++ ..+++ +.++|+
T Consensus 192 a~~l~~~~--~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-----~~~i~-~~~~D~ 263 (354)
T 3tma_A 192 AQALLRLA--DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-----LSWIR-FLRADA 263 (354)
T ss_dssp HHHHHHHT--TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-----CTTCE-EEECCG
T ss_pred HHHHHHHh--CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-----CCceE-EEeCCh
Confidence 44555555 67789999999999999999999987455679999999999999999999864 34899 999999
Q ss_pred CCCCcCCCCccEEEecCcC
Q psy425 220 RKPYKKNGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~ 238 (254)
.........||+|+++..+
T Consensus 264 ~~~~~~~~~~D~Ii~npPy 282 (354)
T 3tma_A 264 RHLPRFFPEVDRILANPPH 282 (354)
T ss_dssp GGGGGTCCCCSEEEECCCS
T ss_pred hhCccccCCCCEEEECCCC
Confidence 8755445569999998765
No 150
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.27 E-value=4e-11 Score=103.62 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=71.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCc--ccCCCeeEEEEc
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKL--YKLYKIMDVVEW 217 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~--~~~~~v~~~~~~ 217 (254)
...+++.+.....++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|+++....+... ....+++ ++++
T Consensus 21 ~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~-~~~~ 97 (313)
T 3bgv_A 21 IGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAE-FITA 97 (313)
T ss_dssp HHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEE-EEEC
T ss_pred HHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEE-EEEe
Confidence 444555554344578899999999999999988752 3589999999999999999886531000 0124688 9999
Q ss_pred CCCCCC----c--CCCCccEEEecCcCcCc
Q psy425 218 DARKPY----K--KNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 218 d~~~~~----~--~~~~fD~I~~~~~~~~~ 241 (254)
|+.... . ..++||+|+++.+++++
T Consensus 98 D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~ 127 (313)
T 3bgv_A 98 DSSKELLIDKFRDPQMCFDICSCQFVCHYS 127 (313)
T ss_dssp CTTTSCSTTTCSSTTCCEEEEEEETCGGGG
T ss_pred cccccchhhhcccCCCCEEEEEEecchhhc
Confidence 998542 2 23479999999999776
No 151
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.27 E-value=5.9e-11 Score=99.37 Aligned_cols=83 Identities=13% Similarity=0.032 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC----CCcC--C
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK----PYKK--N 226 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~----~~~~--~ 226 (254)
++.+|||+|||+|.++..++... +..+|+|+|+++.+++.|++++..++ ...+++ ++++|+.. .... +
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~~~~~~~~ 138 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNN----LSDLIK-VVKVPQKTLLMDALKEESE 138 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEECCTTCSSTTTSTTCCS
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcC----CCccEE-EEEcchhhhhhhhhhcccC
Confidence 57899999999999999998875 23589999999999999999998863 234599 99999764 2222 2
Q ss_pred CCccEEEecCcCcCc
Q psy425 227 GPYDVIHFGSGVKHI 241 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~ 241 (254)
++||+|+++..+...
T Consensus 139 ~~fD~i~~npp~~~~ 153 (254)
T 2h00_A 139 IIYDFCMCNPPFFAN 153 (254)
T ss_dssp CCBSEEEECCCCC--
T ss_pred CcccEEEECCCCccC
Confidence 479999999766433
No 152
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.27 E-value=1.8e-11 Score=105.00 Aligned_cols=93 Identities=13% Similarity=0.117 Sum_probs=69.9
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .. ++.+|||||||+|.++..+++.. . +|+|+|+++.+++.|++++...+. ....+++ ++++|+
T Consensus 72 ~~~~~~~~--~~-~~~~vLDlGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~v~-~~~~d~ 142 (299)
T 3g2m_A 72 AREFATRT--GP-VSGPVLELAAGMGRLTFPFLDLG-W--EVTALELSTSVLAAFRKRLAEAPA--DVRDRCT-LVQGDM 142 (299)
T ss_dssp HHHHHHHH--CC-CCSCEEEETCTTTTTHHHHHTTT-C--CEEEEESCHHHHHHHHHHHHTSCH--HHHTTEE-EEECBT
T ss_pred HHHHHHhh--CC-CCCcEEEEeccCCHHHHHHHHcC-C--eEEEEECCHHHHHHHHHHHhhccc--ccccceE-EEeCch
Confidence 45555555 33 34599999999999999999874 2 699999999999999999876310 0015899 999999
Q ss_pred CCCCcCCCCccEEEec-CcCcCch
Q psy425 220 RKPYKKNGPYDVIHFG-SGVKHIP 242 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~-~~~~~~~ 242 (254)
..... .++||+|++. .++++++
T Consensus 143 ~~~~~-~~~fD~v~~~~~~~~~~~ 165 (299)
T 3g2m_A 143 SAFAL-DKRFGTVVISSGSINELD 165 (299)
T ss_dssp TBCCC-SCCEEEEEECHHHHTTSC
T ss_pred hcCCc-CCCcCEEEECCcccccCC
Confidence 86443 5679998865 5566665
No 153
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.27 E-value=2.3e-11 Score=98.72 Aligned_cols=87 Identities=14% Similarity=0.144 Sum_probs=68.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
..++.+|||+|||+|.++..+ .. .+|+|+|+++.+++.++++. .+++ +.++|+.......++||
T Consensus 34 ~~~~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~----------~~~~-~~~~d~~~~~~~~~~fD 97 (211)
T 2gs9_A 34 LPPGESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRA----------PEAT-WVRAWGEALPFPGESFD 97 (211)
T ss_dssp CCCCSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHC----------TTSE-EECCCTTSCCSCSSCEE
T ss_pred cCCCCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhC----------CCcE-EEEcccccCCCCCCcEE
Confidence 348899999999999998776 11 27999999999999998874 3688 99999986554566799
Q ss_pred EEEecCcCcCchH---HHHHHHHhhc
Q psy425 231 VIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 231 ~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
+|++..+++++++ .+.+..+.||
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~ 123 (211)
T 2gs9_A 98 VVLLFTTLEFVEDVERVLLEARRVLR 123 (211)
T ss_dssp EEEEESCTTTCSCHHHHHHHHHHHEE
T ss_pred EEEEcChhhhcCCHHHHHHHHHHHcC
Confidence 9999999988854 2444445555
No 154
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.26 E-value=4.9e-11 Score=99.48 Aligned_cols=75 Identities=21% Similarity=0.162 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
..++.+|||+|||+|.++..+++.. . +|+|+|+++.+++.|++++... ..+++ ++++|+...... ++||
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~~-~--~v~gvD~s~~~l~~a~~~~~~~------~~~v~-~~~~d~~~~~~~-~~fD 107 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAERG-Y--EVVGLDLHEEMLRVARRKAKER------NLKIE-FLQGDVLEIAFK-NEFD 107 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHT------TCCCE-EEESCGGGCCCC-SCEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHCC-C--eEEEEECCHHHHHHHHHHHHhc------CCceE-EEECChhhcccC-CCcc
Confidence 4567899999999999999999873 3 7999999999999999998774 23799 999999864333 5699
Q ss_pred EEEecC
Q psy425 231 VIHFGS 236 (254)
Q Consensus 231 ~I~~~~ 236 (254)
+|++..
T Consensus 108 ~v~~~~ 113 (252)
T 1wzn_A 108 AVTMFF 113 (252)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999864
No 155
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.26 E-value=1.3e-11 Score=102.42 Aligned_cols=88 Identities=22% Similarity=0.103 Sum_probs=69.1
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC--CcCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP--YKKNG 227 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~--~~~~~ 227 (254)
.+.++.+|||||||+|.++..+++.. . +|+|+|+++++++.|+++ ++ +..+|+... ....+
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~-------------~~-~~~~d~~~~~~~~~~~ 100 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEG-I--ESIGVDINEDMIKFCEGK-------------FN-VVKSDAIEYLKSLPDK 100 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHT-C--CEEEECSCHHHHHHHHTT-------------SE-EECSCHHHHHHTSCTT
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCC-C--cEEEEECCHHHHHHHHhh-------------cc-eeeccHHHHhhhcCCC
Confidence 56788999999999999999999884 3 599999999999887664 55 888887642 22456
Q ss_pred CccEEEecCcCcCchH-----HHHHHHHhhcC
Q psy425 228 PYDVIHFGSGVKHIPI-----EVSKLCRSQKK 254 (254)
Q Consensus 228 ~fD~I~~~~~~~~~~~-----~l~~~lr~lk~ 254 (254)
+||+|++..+++++++ .+.+..+.||+
T Consensus 101 ~fD~i~~~~~l~~~~~~~~~~~l~~~~~~Lkp 132 (240)
T 3dli_A 101 YLDGVMISHFVEHLDPERLFELLSLCYSKMKY 132 (240)
T ss_dssp CBSEEEEESCGGGSCGGGHHHHHHHHHHHBCT
T ss_pred CeeEEEECCchhhCCcHHHHHHHHHHHHHcCC
Confidence 7999999999988863 35555566664
No 156
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.26 E-value=6.5e-11 Score=107.07 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=78.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++.. .+|+|+|+++++++.|++|+..+ +..+++ |+++|+
T Consensus 275 ~~~~~~~l--~~~~~~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~-----~~~~v~-f~~~d~ 343 (433)
T 1uwv_A 275 VARALEWL--DVQPEDRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLN-----GLQNVT-FYHENL 343 (433)
T ss_dssp HHHHHHHH--TCCTTCEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHT-----TCCSEE-EEECCT
T ss_pred HHHHHHhh--cCCCCCEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHc-----CCCceE-EEECCH
Confidence 44455555 56678999999999999999999873 37999999999999999999886 356899 999999
Q ss_pred CCCCc----CCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 220 RKPYK----KNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~----~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
..... ..++||+|+++....... .+.+.+..++
T Consensus 344 ~~~l~~~~~~~~~fD~Vv~dPPr~g~~-~~~~~l~~~~ 380 (433)
T 1uwv_A 344 EEDVTKQPWAKNGFDKVLLDPARAGAA-GVMQQIIKLE 380 (433)
T ss_dssp TSCCSSSGGGTTCCSEEEECCCTTCCH-HHHHHHHHHC
T ss_pred HHHhhhhhhhcCCCCEEEECCCCccHH-HHHHHHHhcC
Confidence 86332 235699999987665554 3555555443
No 157
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.26 E-value=4.5e-11 Score=105.10 Aligned_cols=103 Identities=20% Similarity=0.110 Sum_probs=76.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||||||+|.++..+++... .+|+|+|+++ +++.|++++..++ ..++++ ++.+|+
T Consensus 39 ~~~i~~~l--~~~~~~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~----l~~~v~-~~~~d~ 108 (348)
T 2y1w_A 39 QRAILQNH--TDFKDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNN----LTDRIV-VIPGKV 108 (348)
T ss_dssp HHHHHHTG--GGTTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-HHHHHHHHHHHTT----CTTTEE-EEESCT
T ss_pred HHHHHhcc--ccCCcCEEEEcCCCccHHHHHHHhCCC--CEEEEECCHH-HHHHHHHHHHHcC----CCCcEE-EEEcch
Confidence 34444555 556889999999999999999988632 4899999996 8899999988764 336899 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCch-----HHHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIP-----IEVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~-----~~l~~~lr~lk 253 (254)
.+...+ ++||+|++...+.++. ..+.+..+.||
T Consensus 109 ~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lk 146 (348)
T 2y1w_A 109 EEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLK 146 (348)
T ss_dssp TTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEE
T ss_pred hhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcC
Confidence 864333 4699999997765442 33444445554
No 158
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.26 E-value=3e-11 Score=107.31 Aligned_cols=96 Identities=22% Similarity=0.106 Sum_probs=73.2
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
...++.+|||+|||+|.++..+++.+. .+|+|+|++ .+++.|++++..++ ...+++ ++++|+.....+ ++|
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~-~~~ 130 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANN----LDHIVE-VIEGSVEDISLP-EKV 130 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTT----CTTTEE-EEESCGGGCCCS-SCE
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcC----CCCeEE-EEECchhhcCcC-Ccc
Confidence 456889999999999999999998843 389999999 99999999998864 345699 999999864444 679
Q ss_pred cEEEecCcCcC-----chHHHHHH-HHhhcC
Q psy425 230 DVIHFGSGVKH-----IPIEVSKL-CRSQKK 254 (254)
Q Consensus 230 D~I~~~~~~~~-----~~~~l~~~-lr~lk~ 254 (254)
|+|++...... ....+.+. .+.||+
T Consensus 131 D~Iv~~~~~~~l~~e~~~~~~l~~~~~~Lkp 161 (376)
T 3r0q_C 131 DVIISEWMGYFLLRESMFDSVISARDRWLKP 161 (376)
T ss_dssp EEEEECCCBTTBTTTCTHHHHHHHHHHHEEE
T ss_pred eEEEEcChhhcccchHHHHHHHHHHHhhCCC
Confidence 99999664332 23334443 366653
No 159
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.26 E-value=1.5e-11 Score=101.44 Aligned_cols=86 Identities=21% Similarity=0.294 Sum_probs=66.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-cC-CCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-KK-NGP 228 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-~~-~~~ 228 (254)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|+++ ..+++ ++++|+.... .. .++
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~----------~~~~~-~~~~d~~~~~~~~~~~~ 111 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARAN----------APHAD-VYEWNGKGELPAGLGAP 111 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHH----------CTTSE-EEECCSCSSCCTTCCCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHh----------CCCce-EEEcchhhccCCcCCCC
Confidence 5688999999999999999999873 3799999999999999987 13688 9999995322 33 567
Q ss_pred ccEEEecCcCcCchHHHHHHHHhhc
Q psy425 229 YDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 229 fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
||+|+++. .....+.+..+.||
T Consensus 112 fD~v~~~~---~~~~~l~~~~~~Lk 133 (226)
T 3m33_A 112 FGLIVSRR---GPTSVILRLPELAA 133 (226)
T ss_dssp EEEEEEES---CCSGGGGGHHHHEE
T ss_pred EEEEEeCC---CHHHHHHHHHHHcC
Confidence 99999984 33343445555555
No 160
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.26 E-value=5.1e-11 Score=105.31 Aligned_cols=93 Identities=20% Similarity=0.077 Sum_probs=75.9
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+++.+ .+.++.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++...+ ..++++ ++.+|+.
T Consensus 172 ~~~~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~ 242 (374)
T 1qzz_A 172 EAPADAY--DWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAG----LADRVT-VAEGDFF 242 (374)
T ss_dssp HHHHHTS--CCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEE-EEECCTT
T ss_pred HHHHHhC--CCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcC----CCCceE-EEeCCCC
Confidence 3445555 56778999999999999999999986 5568999999 999999999988753 334899 9999997
Q ss_pred CCCcCCCCccEEEecCcCcCchHH
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIPIE 244 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~~~ 244 (254)
+..+ . .||+|++..+++++++.
T Consensus 243 ~~~~-~-~~D~v~~~~vl~~~~~~ 264 (374)
T 1qzz_A 243 KPLP-V-TADVVLLSFVLLNWSDE 264 (374)
T ss_dssp SCCS-C-CEEEEEEESCGGGSCHH
T ss_pred CcCC-C-CCCEEEEeccccCCCHH
Confidence 6433 2 39999999999988764
No 161
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.26 E-value=7e-11 Score=94.02 Aligned_cols=78 Identities=21% Similarity=0.220 Sum_probs=64.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
+.++.+|||+|||+|.++..+++.. . +++++|+++.+++.+++++ .+++ +..+|+.......++||
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~-~--~v~~~D~~~~~~~~a~~~~----------~~~~-~~~~d~~~~~~~~~~~D 109 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQG-H--DVLGTDLDPILIDYAKQDF----------PEAR-WVVGDLSVDQISETDFD 109 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHC----------TTSE-EEECCTTTSCCCCCCEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCC-C--cEEEEcCCHHHHHHHHHhC----------CCCc-EEEcccccCCCCCCcee
Confidence 5688999999999999999999873 3 7999999999999998874 3588 99999986444456799
Q ss_pred EEEec-CcCcCch
Q psy425 231 VIHFG-SGVKHIP 242 (254)
Q Consensus 231 ~I~~~-~~~~~~~ 242 (254)
+|++. .++++++
T Consensus 110 ~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 110 LIVSAGNVMGFLA 122 (195)
T ss_dssp EEEECCCCGGGSC
T ss_pred EEEECCcHHhhcC
Confidence 99998 6777663
No 162
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.25 E-value=7.9e-11 Score=106.21 Aligned_cols=102 Identities=17% Similarity=0.175 Sum_probs=81.6
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+.+.+.. +.++.+|||+|||+|.++..+++.. . +|+|+|+++++++.|++|+..++ .. ++ |..+|+
T Consensus 278 ~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~-~--~V~gvD~s~~ai~~A~~n~~~ng-----l~-v~-~~~~d~ 346 (425)
T 2jjq_A 278 AVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRG-F--NVKGFDSNEFAIEMARRNVEINN-----VD-AE-FEVASD 346 (425)
T ss_dssp HHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHHT-----CC-EE-EEECCT
T ss_pred HHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHHcC-----Cc-EE-EEECCh
Confidence 4445555543 5688999999999999999999874 3 79999999999999999998863 44 99 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
...... +||+|+++.......+.+.+.++.+++
T Consensus 347 ~~~~~~--~fD~Vv~dPPr~g~~~~~~~~l~~l~p 379 (425)
T 2jjq_A 347 REVSVK--GFDTVIVDPPRAGLHPRLVKRLNREKP 379 (425)
T ss_dssp TTCCCT--TCSEEEECCCTTCSCHHHHHHHHHHCC
T ss_pred HHcCcc--CCCEEEEcCCccchHHHHHHHHHhcCC
Confidence 865433 699999988766677667777777664
No 163
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.25 E-value=2.3e-11 Score=101.29 Aligned_cols=86 Identities=10% Similarity=0.089 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcccCCCeeEEEEcCCCCCC---cCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISY-PKLYKLYKIMDVVEWDARKPY---KKN 226 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~v~~~~~~d~~~~~---~~~ 226 (254)
..++.+|||||||+|.++..+|+.. +...|+|+|+++.+++.|++++.... .......|++ ++++|+.... ...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~-~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIA-CLRSNAMKHLPNFFYK 121 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEE-EEECCTTTCHHHHCCT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEE-EEECcHHHhhhhhCCC
Confidence 4567899999999999999999885 45689999999999999998875310 0001356899 9999997522 245
Q ss_pred CCccEEEecCcC
Q psy425 227 GPYDVIHFGSGV 238 (254)
Q Consensus 227 ~~fD~I~~~~~~ 238 (254)
+.||.|++...-
T Consensus 122 ~~~D~v~~~~~d 133 (235)
T 3ckk_A 122 GQLTKMFFLFPD 133 (235)
T ss_dssp TCEEEEEEESCC
T ss_pred cCeeEEEEeCCC
Confidence 679999987544
No 164
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.25 E-value=4.6e-11 Score=104.23 Aligned_cols=80 Identities=23% Similarity=0.198 Sum_probs=65.7
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
...++.+|||+|||+|.++..+++... .+|+|+|++ .+++.|++++..++ ..++++ ++.+|+.+...+.++|
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s-~~~~~a~~~~~~~~----~~~~i~-~~~~d~~~~~~~~~~~ 106 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKHGA--KHVIGVDMS-SIIEMAKELVELNG----FSDKIT-LLRGKLEDVHLPFPKV 106 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTCC--SEEEEEESS-THHHHHHHHHHHTT----CTTTEE-EEESCTTTSCCSSSCE
T ss_pred hhcCCCEEEEecCccHHHHHHHHHCCC--CEEEEEChH-HHHHHHHHHHHHcC----CCCCEE-EEECchhhccCCCCcc
Confidence 455789999999999999999988732 489999999 69999999998864 345799 9999998654444679
Q ss_pred cEEEecCc
Q psy425 230 DVIHFGSG 237 (254)
Q Consensus 230 D~I~~~~~ 237 (254)
|+|++...
T Consensus 107 D~Ivs~~~ 114 (328)
T 1g6q_1 107 DIIISEWM 114 (328)
T ss_dssp EEEEECCC
T ss_pred cEEEEeCc
Confidence 99998754
No 165
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.25 E-value=6.3e-11 Score=100.81 Aligned_cols=105 Identities=16% Similarity=0.030 Sum_probs=76.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCC---ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEE
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGS---GFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVE 216 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~---G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~ 216 (254)
...++..+. ...+..+|||||||+ |.++..+.+.. +..+|+++|+|+.|++.|++++.. ..+++ ++.
T Consensus 65 ~~~~~~~l~-~~~~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~-------~~~v~-~~~ 134 (274)
T 2qe6_A 65 LVRGVRFLA-GEAGISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAK-------DPNTA-VFT 134 (274)
T ss_dssp HHHHHHHHH-TTTCCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTT-------CTTEE-EEE
T ss_pred HHHHHHHHh-hccCCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCC-------CCCeE-EEE
Confidence 334444442 123457999999999 98877666654 567999999999999999998754 35799 999
Q ss_pred cCCCCCC-----------cCCCCccEEEecCcCcCchH-----HHHHHHHhhcC
Q psy425 217 WDARKPY-----------KKNGPYDVIHFGSGVKHIPI-----EVSKLCRSQKK 254 (254)
Q Consensus 217 ~d~~~~~-----------~~~~~fD~I~~~~~~~~~~~-----~l~~~lr~lk~ 254 (254)
+|+.... .+..+||+|++..+++++++ .+.+..+.||+
T Consensus 135 ~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~p 188 (274)
T 2qe6_A 135 ADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAP 188 (274)
T ss_dssp CCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCT
T ss_pred eeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCC
Confidence 9997521 12246999999999998875 24445555654
No 166
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.24 E-value=2.5e-11 Score=103.22 Aligned_cols=87 Identities=16% Similarity=0.177 Sum_probs=71.3
Q ss_pred HHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC
Q psy425 143 CLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP 222 (254)
Q Consensus 143 ~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~ 222 (254)
+...+ .+.++.+|||+|||+|..+..+++.....++|+++|+++.+++.+++++..+ +..+++ ++++|+...
T Consensus 75 ~~~~l--~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~-----g~~~v~-~~~~D~~~~ 146 (274)
T 3ajd_A 75 PPIVL--NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM-----GVLNTI-IINADMRKY 146 (274)
T ss_dssp HHHHH--CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT-----TCCSEE-EEESCHHHH
T ss_pred HHHHh--CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh-----CCCcEE-EEeCChHhc
Confidence 34455 6788999999999999999999998654479999999999999999999885 355899 999998753
Q ss_pred Cc----CCCCccEEEecCc
Q psy425 223 YK----KNGPYDVIHFGSG 237 (254)
Q Consensus 223 ~~----~~~~fD~I~~~~~ 237 (254)
.. ..++||+|+++..
T Consensus 147 ~~~~~~~~~~fD~Vl~d~P 165 (274)
T 3ajd_A 147 KDYLLKNEIFFDKILLDAP 165 (274)
T ss_dssp HHHHHHTTCCEEEEEEEEC
T ss_pred chhhhhccccCCEEEEcCC
Confidence 22 1457999999843
No 167
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.24 E-value=1.2e-10 Score=103.15 Aligned_cols=86 Identities=13% Similarity=0.038 Sum_probs=73.3
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
...++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.|++++...+ ..++++ +..+|+..+.+. .|
T Consensus 199 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----l~~~v~-~~~~d~~~~~p~--~~ 269 (369)
T 3gwz_A 199 DFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRG----LADRCE-ILPGDFFETIPD--GA 269 (369)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEE-EEECCTTTCCCS--SC
T ss_pred CCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcC----cCCceE-EeccCCCCCCCC--Cc
Confidence 45678999999999999999999986 5668999999 999999999988753 346899 999999854433 69
Q ss_pred cEEEecCcCcCchHH
Q psy425 230 DVIHFGSGVKHIPIE 244 (254)
Q Consensus 230 D~I~~~~~~~~~~~~ 244 (254)
|+|++..++++++++
T Consensus 270 D~v~~~~vlh~~~d~ 284 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDD 284 (369)
T ss_dssp SEEEEESCGGGSCHH
T ss_pred eEEEhhhhhccCCHH
Confidence 999999999988864
No 168
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.24 E-value=3.9e-11 Score=103.54 Aligned_cols=99 Identities=15% Similarity=0.097 Sum_probs=67.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCc-ccCCCeeEEEEcCCCCC--------C
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKL-YKLYKIMDVVEWDARKP--------Y 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~v~~~~~~d~~~~--------~ 223 (254)
++.+|||||||+|..+..++... .++|+|+|+|+.|++.|+++....+... ....+++ +.+.|+... .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~-f~~~d~~~d~~~~~l~~~ 124 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFD-YIQETIRSDTFVSSVREV 124 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEE-EEECCTTSSSHHHHHHTT
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccc-hhhhhcccchhhhhhhcc
Confidence 57899999999998766655543 2479999999999999999887642000 0001367 888887311 1
Q ss_pred cCCCCccEEEecCcCcCc------hHHHHHHHHhhcC
Q psy425 224 KKNGPYDVIHFGSGVKHI------PIEVSKLCRSQKK 254 (254)
Q Consensus 224 ~~~~~fD~I~~~~~~~~~------~~~l~~~lr~lk~ 254 (254)
...++||+|++..+++++ ...+.+..+.|||
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lkp 161 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTAS 161 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEE
T ss_pred ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCC
Confidence 234579999999888543 4445566666664
No 169
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.24 E-value=2.8e-12 Score=103.90 Aligned_cols=90 Identities=19% Similarity=0.188 Sum_probs=55.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+. ...++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++..++ . +++ ++++|+
T Consensus 18 ~~~~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~-~~~~d~ 88 (215)
T 4dzr_A 18 VEEAIRFLK-RMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFG-----A-VVD-WAAADG 88 (215)
T ss_dssp HHHHHHHHT-TCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------------CCHHHH
T ss_pred HHHHHHHhh-hcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhC-----C-ceE-EEEcch
Confidence 455555552 22688999999999999999999985 45689999999999999999988753 3 788 999998
Q ss_pred CCCCcC----CCCccEEEecCcC
Q psy425 220 RKPYKK----NGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~~~----~~~fD~I~~~~~~ 238 (254)
...... .++||+|+++..+
T Consensus 89 ~~~~~~~~~~~~~fD~i~~npp~ 111 (215)
T 4dzr_A 89 IEWLIERAERGRPWHAIVSNPPY 111 (215)
T ss_dssp HHHHHHHHHTTCCBSEEEECCCC
T ss_pred HhhhhhhhhccCcccEEEECCCC
Confidence 763332 2679999998665
No 170
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.24 E-value=3.1e-11 Score=101.70 Aligned_cols=85 Identities=12% Similarity=0.121 Sum_probs=69.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++..+++.+ .+|+++|+++++++.+++++.. ..+++ ++++|+
T Consensus 18 ~~~iv~~~--~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~-------~~~v~-~i~~D~ 84 (255)
T 3tqs_A 18 LQKIVSAI--HPQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ-------QKNIT-IYQNDA 84 (255)
T ss_dssp HHHHHHHH--CCCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT-------CTTEE-EEESCT
T ss_pred HHHHHHhc--CCCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh-------CCCcE-EEEcch
Confidence 77788888 78899999999999999999999875 3799999999999999998764 35899 999999
Q ss_pred CCCCcC----CCCccEEEecCcC
Q psy425 220 RKPYKK----NGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~~~----~~~fD~I~~~~~~ 238 (254)
...... .++|| |++|...
T Consensus 85 ~~~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 85 LQFDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp TTCCGGGSCCSSCEE-EEEECCH
T ss_pred HhCCHHHhccCCCeE-EEecCCc
Confidence 854322 24588 6666544
No 171
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.23 E-value=7.1e-11 Score=98.65 Aligned_cols=85 Identities=14% Similarity=0.143 Sum_probs=65.8
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCC-c--ccCCCeeEEEEcCCCCCC---
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPK-L--YKLYKIMDVVEWDARKPY--- 223 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~--~~~~~v~~~~~~d~~~~~--- 223 (254)
.+.++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++..+... . .+..|++ ++.+|+....
T Consensus 46 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~-~~~~D~~~~l~~~ 123 (246)
T 2vdv_E 46 QMTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNIN-VLRGNAMKFLPNF 123 (246)
T ss_dssp CBSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEE-EEECCTTSCGGGT
T ss_pred cCCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEE-EEeccHHHHHHHh
Confidence 34578899999999999999999986 4568999999999999999998763000 0 0246899 9999997532
Q ss_pred cCCCCccEEEecC
Q psy425 224 KKNGPYDVIHFGS 236 (254)
Q Consensus 224 ~~~~~fD~I~~~~ 236 (254)
.+.+.+|.|++..
T Consensus 124 ~~~~~~d~v~~~~ 136 (246)
T 2vdv_E 124 FEKGQLSKMFFCF 136 (246)
T ss_dssp SCTTCEEEEEEES
T ss_pred ccccccCEEEEEC
Confidence 3356799998764
No 172
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.23 E-value=1.1e-10 Score=101.62 Aligned_cols=94 Identities=15% Similarity=0.189 Sum_probs=75.7
Q ss_pred HHHHHHHhhhcC--CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEc
Q psy425 140 QAACLQHLSDKL--LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEW 217 (254)
Q Consensus 140 ~~~~l~~l~~~~--~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~ 217 (254)
...+++.+ .. .++.+|||+|||+|..+..+++.. +..+++++|++ .+++.|++++...+ ...+++ +..+
T Consensus 152 ~~~~~~~~--~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~----~~~~v~-~~~~ 222 (335)
T 2r3s_A 152 AQLIAQLV--NENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQG----VASRYH-TIAG 222 (335)
T ss_dssp HHHHHHHH--TC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHT----CGGGEE-EEES
T ss_pred HHHHHHhc--ccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcC----CCcceE-EEec
Confidence 34555555 45 778999999999999999999986 45689999999 99999999988753 234699 9999
Q ss_pred CCCCCCcCCCCccEEEecCcCcCchH
Q psy425 218 DARKPYKKNGPYDVIHFGSGVKHIPI 243 (254)
Q Consensus 218 d~~~~~~~~~~fD~I~~~~~~~~~~~ 243 (254)
|+.....+.+ ||+|++..+++++++
T Consensus 223 d~~~~~~~~~-~D~v~~~~~l~~~~~ 247 (335)
T 2r3s_A 223 SAFEVDYGND-YDLVLLPNFLHHFDV 247 (335)
T ss_dssp CTTTSCCCSC-EEEEEEESCGGGSCH
T ss_pred ccccCCCCCC-CcEEEEcchhccCCH
Confidence 9986433333 999999999998854
No 173
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.23 E-value=6.3e-11 Score=100.59 Aligned_cols=95 Identities=16% Similarity=0.092 Sum_probs=75.3
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++ +|||||||+|.++..+++.+. +|+++|+++++++.+++++.. .+++ ++++|+
T Consensus 36 ~~~Iv~~~--~~~~~-~VLEIG~G~G~lt~~L~~~~~---~V~avEid~~~~~~l~~~~~~--------~~v~-vi~~D~ 100 (271)
T 3fut_A 36 LRRIVEAA--RPFTG-PVFEVGPGLGALTRALLEAGA---EVTAIEKDLRLRPVLEETLSG--------LPVR-LVFQDA 100 (271)
T ss_dssp HHHHHHHH--CCCCS-CEEEECCTTSHHHHHHHHTTC---CEEEEESCGGGHHHHHHHTTT--------SSEE-EEESCG
T ss_pred HHHHHHhc--CCCCC-eEEEEeCchHHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcCC--------CCEE-EEECCh
Confidence 77788888 78888 999999999999999999863 599999999999999998643 4799 999999
Q ss_pred CCCCcC-CCCccEEEecCcCcCchHHHHHHH
Q psy425 220 RKPYKK-NGPYDVIHFGSGVKHIPIEVSKLC 249 (254)
Q Consensus 220 ~~~~~~-~~~fD~I~~~~~~~~~~~~l~~~l 249 (254)
.....+ ...+|.|++|....--.+.+.+.+
T Consensus 101 l~~~~~~~~~~~~iv~NlPy~iss~il~~ll 131 (271)
T 3fut_A 101 LLYPWEEVPQGSLLVANLPYHIATPLVTRLL 131 (271)
T ss_dssp GGSCGGGSCTTEEEEEEECSSCCHHHHHHHH
T ss_pred hhCChhhccCccEEEecCcccccHHHHHHHh
Confidence 854333 235899998876654444444444
No 174
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.23 E-value=4.5e-11 Score=106.10 Aligned_cols=82 Identities=20% Similarity=0.086 Sum_probs=69.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
..++.+|||+|||+|.++..++..+ ..++|+|+|+++.+++.|++|+..++ ..++++ +.++|+.......++||
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~g----l~~~i~-~~~~D~~~~~~~~~~fD 288 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAG----VLDKIK-FIQGDATQLSQYVDSVD 288 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTT----CGGGCE-EEECCGGGGGGTCSCEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcC----CCCceE-EEECChhhCCcccCCcC
Confidence 5688999999999999999999885 34579999999999999999998864 235799 99999987554456799
Q ss_pred EEEecCcC
Q psy425 231 VIHFGSGV 238 (254)
Q Consensus 231 ~I~~~~~~ 238 (254)
+|+++..+
T Consensus 289 ~Ii~npPy 296 (373)
T 3tm4_A 289 FAISNLPY 296 (373)
T ss_dssp EEEEECCC
T ss_pred EEEECCCC
Confidence 99998765
No 175
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.23 E-value=1.1e-10 Score=103.19 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=75.7
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--cCCCCc
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY--KKNGPY 229 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~--~~~~~f 229 (254)
....+|||||||+|..+..+++.. +..+++++|+ +.+++.|++++...+ ..++++ ++.+|+.... .+ ++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~~p-~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLS----GSERIH-GHGANLLDRDVPFP-TGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCT----TGGGEE-EEECCCCSSSCCCC-CCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcC----cccceE-EEEccccccCCCCC-CCc
Confidence 466899999999999999999986 5579999999 999999999987643 235799 9999998642 22 569
Q ss_pred cEEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 230 DVIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 230 D~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
|+|++..++++++++ +.+..+.|||
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p 279 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIGK 279 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCCT
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999988754 3344455553
No 176
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.23 E-value=5e-11 Score=103.89 Aligned_cols=84 Identities=13% Similarity=-0.037 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccE
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDV 231 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~ 231 (254)
.+..+|||||||+|..+..+++.. +..+++++|+ +.+++.|++++...+ ..++++ +..+|+....+. +||+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~p~--~~D~ 238 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTG----LSGRAQ-VVVGSFFDPLPA--GAGG 238 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT----CTTTEE-EEECCTTSCCCC--SCSE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcC----cCcCeE-EecCCCCCCCCC--CCcE
Confidence 456899999999999999999986 5578999999 999999999988753 346899 999999854433 6999
Q ss_pred EEecCcCcCchHH
Q psy425 232 IHFGSGVKHIPIE 244 (254)
Q Consensus 232 I~~~~~~~~~~~~ 244 (254)
|++..++++++++
T Consensus 239 v~~~~vlh~~~~~ 251 (332)
T 3i53_A 239 YVLSAVLHDWDDL 251 (332)
T ss_dssp EEEESCGGGSCHH
T ss_pred EEEehhhccCCHH
Confidence 9999999988874
No 177
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.22 E-value=1.4e-11 Score=105.53 Aligned_cols=98 Identities=12% Similarity=0.078 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHc---CCCCEE--EEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEE--EcCCCCCC-
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMV---GDKGHV--TAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVV--EWDARKPY- 223 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~---~~~~~v--~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~--~~d~~~~~- 223 (254)
.++.+|||||||+|.++..++... .+...| +|+|+|++|++.|++++.... ...++. +. .+++....
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~----~~~~v~-~~~~~~~~~~~~~ 125 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS----NLENVK-FAWHKETSSEYQS 125 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS----SCTTEE-EEEECSCHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc----CCCcce-EEEEecchhhhhh
Confidence 467899999999998775443221 134444 999999999999999986521 234665 54 44443211
Q ss_pred -----cCCCCccEEEecCcCcCchH---HHHHHHHhhcC
Q psy425 224 -----KKNGPYDVIHFGSGVKHIPI---EVSKLCRSQKK 254 (254)
Q Consensus 224 -----~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk~ 254 (254)
..+++||+|++..+++++++ .+.+..+.|||
T Consensus 126 ~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkp 164 (292)
T 2aot_A 126 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGT 164 (292)
T ss_dssp HHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEE
T ss_pred hhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCC
Confidence 13567999999999998864 46666677664
No 178
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.22 E-value=1.1e-11 Score=104.63 Aligned_cols=101 Identities=16% Similarity=0.046 Sum_probs=68.4
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcc-----------------------
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLY----------------------- 206 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~----------------------- 206 (254)
...++.+|||||||+|.++..++.... .+|+|+|+|+.|++.|++++..+... .
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~-~d~s~~~~~~~~~~~~~~~~~~~~ 128 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGA-YDWTPAVKFACELEGNSGRWEEKE 128 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTC-CCCHHHHHHHHHHTTCGGGHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCc-ccchHHHHHHHhcCCCCcchhhHH
Confidence 345788999999999988776665432 26999999999999999887542100 0
Q ss_pred --cCCCe-eEEEEcCCCCCCc----CCCCccEEEecCcCcCc----h---HHHHHHHHhhcC
Q psy425 207 --KLYKI-MDVVEWDARKPYK----KNGPYDVIHFGSGVKHI----P---IEVSKLCRSQKK 254 (254)
Q Consensus 207 --~~~~v-~~~~~~d~~~~~~----~~~~fD~I~~~~~~~~~----~---~~l~~~lr~lk~ 254 (254)
...++ + ++.+|+....+ ..++||+|+++.+++++ + ..+.+..+.|||
T Consensus 129 ~~~~~~i~~-~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKP 189 (263)
T 2a14_A 129 EKLRAAVKR-VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKP 189 (263)
T ss_dssp HHHHHHEEE-EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE
T ss_pred HHHHhhhhe-EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCC
Confidence 00123 4 78899886321 24579999999999875 2 234444455553
No 179
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.22 E-value=9.3e-11 Score=103.15 Aligned_cols=93 Identities=22% Similarity=0.143 Sum_probs=76.0
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+++.+ .+.++.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++...+ ..++++ ++.+|+.
T Consensus 173 ~~l~~~~--~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~ 243 (360)
T 1tw3_A 173 DAPAAAY--DWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEG----LSDRVD-VVEGDFF 243 (360)
T ss_dssp HHHHHHS--CCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTT----CTTTEE-EEECCTT
T ss_pred HHHHHhC--CCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcC----CCCceE-EEeCCCC
Confidence 3445555 56778999999999999999999986 5568999999 999999999988753 234899 9999997
Q ss_pred CCCcCCCCccEEEecCcCcCchHH
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIPIE 244 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~~~ 244 (254)
+..+ . .||+|++..+++++++.
T Consensus 244 ~~~~-~-~~D~v~~~~vl~~~~~~ 265 (360)
T 1tw3_A 244 EPLP-R-KADAIILSFVLLNWPDH 265 (360)
T ss_dssp SCCS-S-CEEEEEEESCGGGSCHH
T ss_pred CCCC-C-CccEEEEcccccCCCHH
Confidence 6433 2 39999999999888764
No 180
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.22 E-value=3.8e-11 Score=105.31 Aligned_cols=89 Identities=21% Similarity=0.212 Sum_probs=72.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++..++ .+++ +..+|+
T Consensus 185 ~~~ll~~l--~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~------~~~~-~~~~d~ 254 (343)
T 2pjd_A 185 SQLLLSTL--TPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANG------VEGE-VFASNV 254 (343)
T ss_dssp HHHHHHHS--CTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTT------CCCE-EEECST
T ss_pred HHHHHHhc--CcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhC------CCCE-EEEccc
Confidence 55666666 44567899999999999999999885 55689999999999999999998753 2477 889998
Q ss_pred CCCCcCCCCccEEEecCcCcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKH 240 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~ 240 (254)
.... .++||+|+++..+++
T Consensus 255 ~~~~--~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 255 FSEV--KGRFDMIISNPPFHD 273 (343)
T ss_dssp TTTC--CSCEEEEEECCCCCS
T ss_pred cccc--cCCeeEEEECCCccc
Confidence 7533 457999999998864
No 181
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.22 E-value=3.6e-11 Score=101.12 Aligned_cols=95 Identities=23% Similarity=0.147 Sum_probs=68.9
Q ss_pred HHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC
Q psy425 144 LQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY 223 (254)
Q Consensus 144 l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~ 223 (254)
.+.+...+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|+++.. -. +..+|+....
T Consensus 45 ~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~-----------~~-~~~~d~~~~~ 109 (260)
T 2avn_A 45 GSFLEEYLKNPCRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGV-----------KN-VVEAKAEDLP 109 (260)
T ss_dssp HHHHHHHCCSCCEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTC-----------SC-EEECCTTSCC
T ss_pred HHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcC-----------CC-EEECcHHHCC
Confidence 33333334578999999999999999998773 379999999999999988742 13 7788887654
Q ss_pred cCCCCccEEEecCcCcCc----hHHHHHHHHhhc
Q psy425 224 KKNGPYDVIHFGSGVKHI----PIEVSKLCRSQK 253 (254)
Q Consensus 224 ~~~~~fD~I~~~~~~~~~----~~~l~~~lr~lk 253 (254)
...++||+|++..++.++ ...+.+..+.||
T Consensus 110 ~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~Lk 143 (260)
T 2avn_A 110 FPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLV 143 (260)
T ss_dssp SCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEE
T ss_pred CCCCCEEEEEEcchhhhccccHHHHHHHHHHHcC
Confidence 455679999998766443 233444445555
No 182
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.21 E-value=5.5e-11 Score=105.35 Aligned_cols=75 Identities=21% Similarity=0.188 Sum_probs=63.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
..+|++|||||||+|.++..+|+.+.. +|+|||.++ +++.|++++..|+ ..++|+ ++++|+++...+ .+||
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aGA~--~V~ave~s~-~~~~a~~~~~~n~----~~~~i~-~i~~~~~~~~lp-e~~D 151 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAGAR--RVYAVEASA-IWQQAREVVRFNG----LEDRVH-VLPGPVETVELP-EQVD 151 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECST-THHHHHHHHHHTT----CTTTEE-EEESCTTTCCCS-SCEE
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhCCC--EEEEEeChH-HHHHHHHHHHHcC----CCceEE-EEeeeeeeecCC-cccc
Confidence 347899999999999999988887654 899999995 8899999999875 456799 999999865443 4699
Q ss_pred EEEe
Q psy425 231 VIHF 234 (254)
Q Consensus 231 ~I~~ 234 (254)
+|++
T Consensus 152 vivs 155 (376)
T 4hc4_A 152 AIVS 155 (376)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9998
No 183
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.21 E-value=1.9e-10 Score=101.26 Aligned_cols=93 Identities=18% Similarity=0.106 Sum_probs=75.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++...+ ...+++ ++.+|+
T Consensus 179 ~~~l~~~~--~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~-~~~~d~ 249 (359)
T 1x19_A 179 IQLLLEEA--KLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKG----VADRMR-GIAVDI 249 (359)
T ss_dssp HHHHHHHC--CCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTT----CTTTEE-EEECCT
T ss_pred HHHHHHhc--CCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcC----CCCCEE-EEeCcc
Confidence 34455555 56778999999999999999999986 4568999999 999999999988753 234699 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchH
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPI 243 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~ 243 (254)
.....+. +|+|++..+++++++
T Consensus 250 ~~~~~~~--~D~v~~~~vlh~~~d 271 (359)
T 1x19_A 250 YKESYPE--ADAVLFCRILYSANE 271 (359)
T ss_dssp TTSCCCC--CSEEEEESCGGGSCH
T ss_pred ccCCCCC--CCEEEEechhccCCH
Confidence 8643332 499999999998876
No 184
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.20 E-value=9.3e-11 Score=98.83 Aligned_cols=98 Identities=17% Similarity=0.186 Sum_probs=73.0
Q ss_pred HHHHHHHhhhcC-CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLSDKL-LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~~-~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d 218 (254)
...+.+.+...+ .++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|+++. .++. +..+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~----------~~~~-~~~~d 138 (269)
T 1p91_A 71 RDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY----------PQVT-FCVAS 138 (269)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC----------TTSE-EEECC
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC----------CCcE-EEEcc
Confidence 334444443333 578999999999999999999885 3458999999999999998763 3678 99999
Q ss_pred CCCCCcCCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 219 ARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 219 ~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
+.......++||+|++..+... +.+..+.||
T Consensus 139 ~~~~~~~~~~fD~v~~~~~~~~----l~~~~~~L~ 169 (269)
T 1p91_A 139 SHRLPFSDTSMDAIIRIYAPCK----AEELARVVK 169 (269)
T ss_dssp TTSCSBCTTCEEEEEEESCCCC----HHHHHHHEE
T ss_pred hhhCCCCCCceeEEEEeCChhh----HHHHHHhcC
Confidence 8765445567999998776433 455556555
No 185
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.19 E-value=8.3e-11 Score=103.19 Aligned_cols=88 Identities=14% Similarity=0.093 Sum_probs=72.2
Q ss_pred cCCC-CCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-CCC
Q psy425 150 KLLP-GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-KNG 227 (254)
Q Consensus 150 ~~~~-~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-~~~ 227 (254)
...+ +.+|||||||+|.++..+++.. +..+++++|+ +.+++.+++++...+ ...+++ ++.+|+..... ..+
T Consensus 175 ~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 175 GVFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHD----LGGRVE-FFEKNLLDARNFEGG 247 (352)
T ss_dssp GGGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTT----CGGGEE-EEECCTTCGGGGTTC
T ss_pred CCcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcC----CCCceE-EEeCCcccCcccCCC
Confidence 3445 8899999999999999999986 5578999999 899999999988753 335799 99999986431 234
Q ss_pred CccEEEecCcCcCchHH
Q psy425 228 PYDVIHFGSGVKHIPIE 244 (254)
Q Consensus 228 ~fD~I~~~~~~~~~~~~ 244 (254)
.||+|++..++++++++
T Consensus 248 ~~D~v~~~~vlh~~~~~ 264 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAR 264 (352)
T ss_dssp CEEEEEEESCGGGSCHH
T ss_pred CccEEEEecccccCCHH
Confidence 59999999999988764
No 186
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.19 E-value=6.1e-11 Score=93.60 Aligned_cols=81 Identities=19% Similarity=0.123 Sum_probs=63.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+.....++.+|||+|||+|.++..+++.+ +|+|+|+++.+++. . .+++ ++++|+
T Consensus 10 ~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~------~--------~~~~-~~~~d~ 70 (170)
T 3q87_B 10 TYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES------H--------RGGN-LVRADL 70 (170)
T ss_dssp HHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT------C--------SSSC-EEECST
T ss_pred HHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc------c--------cCCe-EEECCh
Confidence 445556552222577899999999999999998775 69999999999987 2 2688 999999
Q ss_pred CCCCcCCCCccEEEecCcCcC
Q psy425 220 RKPYKKNGPYDVIHFGSGVKH 240 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~ 240 (254)
..... .++||+|+++..+..
T Consensus 71 ~~~~~-~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 71 LCSIN-QESVDVVVFNPPYVP 90 (170)
T ss_dssp TTTBC-GGGCSEEEECCCCBT
T ss_pred hhhcc-cCCCCEEEECCCCcc
Confidence 87443 367999999988764
No 187
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.19 E-value=2.5e-10 Score=97.32 Aligned_cols=89 Identities=18% Similarity=0.227 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeC-CHHHHHHHHHHHHhhCCCcccC-----CCeeEEEEcCCCCCC-
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDH-IPQLINLFMTKLKISYPKLYKL-----YKIMDVVEWDARKPY- 223 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~-----~~v~~~~~~d~~~~~- 223 (254)
..++.+|||+|||+|.++..+++... .+|+++|+ ++.+++.|++|+..|.....+. .+++ +...|..+..
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~-~~~~~~~~~~~ 153 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPK-VVPYRWGDSPD 153 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCE-EEECCTTSCTH
T ss_pred hcCCCeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeE-EEEecCCCccH
Confidence 35788999999999999999888742 37999999 8999999999984321000122 3788 8866654321
Q ss_pred --c---CCCCccEEEecCcCcCch
Q psy425 224 --K---KNGPYDVIHFGSGVKHIP 242 (254)
Q Consensus 224 --~---~~~~fD~I~~~~~~~~~~ 242 (254)
. ..++||+|++..++.+.+
T Consensus 154 ~~~~~~~~~~fD~Ii~~dvl~~~~ 177 (281)
T 3bzb_A 154 SLQRCTGLQRFQVVLLADLLSFHQ 177 (281)
T ss_dssp HHHHHHSCSSBSEEEEESCCSCGG
T ss_pred HHHhhccCCCCCEEEEeCcccChH
Confidence 1 245799999988887653
No 188
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.19 E-value=4e-11 Score=102.34 Aligned_cols=111 Identities=13% Similarity=0.050 Sum_probs=70.0
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCC-----------cc-c-
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPK-----------LY-K- 207 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-----------~~-~- 207 (254)
..+.+.+.....++.+|||||||+|..+..++...+ .+|+|+|+|+.|++.|++++...... .. +
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~ 136 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHF--EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGK 136 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGC--SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCS
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCC--CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCc
Confidence 444555532234788999999999996554444322 38999999999999999865431000 00 0
Q ss_pred ------------CCCeeEEEEcCCCC-CC-----cCCCCccEEEecCcCcC----ch---HHHHHHHHhhcC
Q psy425 208 ------------LYKIMDVVEWDARK-PY-----KKNGPYDVIHFGSGVKH----IP---IEVSKLCRSQKK 254 (254)
Q Consensus 208 ------------~~~v~~~~~~d~~~-~~-----~~~~~fD~I~~~~~~~~----~~---~~l~~~lr~lk~ 254 (254)
...++ ++.+|+.. .+ ...++||+|+++.++++ ++ ..+.+..+.|||
T Consensus 137 ~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lkp 207 (289)
T 2g72_A 137 GECWQDKERQLRARVKR-VLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRP 207 (289)
T ss_dssp CCCHHHHHHHHHHHEEE-EECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE
T ss_pred ccchhhhHHHHHhhhce-EEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCC
Confidence 00156 77789875 22 12346999999999977 32 235555566653
No 189
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.19 E-value=2.3e-11 Score=101.91 Aligned_cols=100 Identities=17% Similarity=0.113 Sum_probs=70.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCc------------cc-----------
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKL------------YK----------- 207 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~------------~~----------- 207 (254)
..++.+|||+|||+|.++..++.... .+|+|+|+++.+++.|++++...+... .+
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 35678999999999999998887643 379999999999999999876521000 00
Q ss_pred -CCCe-eEEEEcCCCCCCc-CC---CCccEEEecCcCc----Cch---HHHHHHHHhhc
Q psy425 208 -LYKI-MDVVEWDARKPYK-KN---GPYDVIHFGSGVK----HIP---IEVSKLCRSQK 253 (254)
Q Consensus 208 -~~~v-~~~~~~d~~~~~~-~~---~~fD~I~~~~~~~----~~~---~~l~~~lr~lk 253 (254)
..++ + +..+|+....+ .. ++||+|++..+++ +++ ..+.+..+.||
T Consensus 132 l~~~v~~-~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk 189 (265)
T 2i62_A 132 LRRAIKQ-VLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLK 189 (265)
T ss_dssp HHHHEEE-EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE
T ss_pred hhhhhee-EEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCC
Confidence 0127 8 99999986432 33 6799999999987 432 23444445554
No 190
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.18 E-value=3.6e-10 Score=91.42 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=65.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
..++.+|||+|||+|.++..+++... .+|+|+|+++.+++.|++++..++ . +++ ++++|+... + .+||
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~-~~~~d~~~~-~--~~~D 114 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFK-----G-KFK-VFIGDVSEF-N--SRVD 114 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGT-----T-SEE-EEESCGGGC-C--CCCS
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcC-----C-CEE-EEECchHHc-C--CCCC
Confidence 45789999999999999999998732 379999999999999999988753 3 799 999999763 2 3699
Q ss_pred EEEecCcCcCc
Q psy425 231 VIHFGSGVKHI 241 (254)
Q Consensus 231 ~I~~~~~~~~~ 241 (254)
+|+++..+...
T Consensus 115 ~v~~~~p~~~~ 125 (207)
T 1wy7_A 115 IVIMNPPFGSQ 125 (207)
T ss_dssp EEEECCCCSSS
T ss_pred EEEEcCCCccc
Confidence 99999876443
No 191
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.17 E-value=1.6e-10 Score=105.67 Aligned_cols=85 Identities=12% Similarity=0.190 Sum_probs=70.8
Q ss_pred HHHhhhcCC--CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC
Q psy425 144 LQHLSDKLL--PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK 221 (254)
Q Consensus 144 l~~l~~~~~--~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~ 221 (254)
...+ .+. ++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+++|++.+ +..+++ ++++|+..
T Consensus 108 ~~~L--~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~-----g~~nv~-~~~~D~~~ 179 (479)
T 2frx_A 108 VAAL--FADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC-----GISNVA-LTHFDGRV 179 (479)
T ss_dssp HHHH--TTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH-----TCCSEE-EECCCSTT
T ss_pred HHHh--CcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----CCCcEE-EEeCCHHH
Confidence 3455 555 8999999999999999999999766679999999999999999999986 456899 99999975
Q ss_pred CCc-CCCCccEEEecC
Q psy425 222 PYK-KNGPYDVIHFGS 236 (254)
Q Consensus 222 ~~~-~~~~fD~I~~~~ 236 (254)
... ..+.||+|+++.
T Consensus 180 ~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 180 FGAAVPEMFDAILLDA 195 (479)
T ss_dssp HHHHSTTCEEEEEEEC
T ss_pred hhhhccccCCEEEECC
Confidence 332 345699999853
No 192
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.17 E-value=8.6e-11 Score=101.24 Aligned_cols=89 Identities=19% Similarity=0.155 Sum_probs=73.9
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||+|||+|.++..+++.++ .++|+|+|+++++++.|++++..+ + .+++ ++++|+
T Consensus 15 l~e~l~~L--~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~-----g-~~v~-~v~~d~ 84 (301)
T 1m6y_A 15 VREVIEFL--KPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEF-----S-DRVS-LFKVSY 84 (301)
T ss_dssp HHHHHHHH--CCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGG-----T-TTEE-EEECCG
T ss_pred HHHHHHhc--CCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhc-----C-CcEE-EEECCH
Confidence 77888888 788999999999999999999999873 568999999999999999998874 3 5899 999998
Q ss_pred CCCC--cC---CCCccEEEecCcC
Q psy425 220 RKPY--KK---NGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~--~~---~~~fD~I~~~~~~ 238 (254)
.... .. ..+||.|++...+
T Consensus 85 ~~l~~~l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 85 READFLLKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp GGHHHHHHHTTCSCEEEEEEECSC
T ss_pred HHHHHHHHhcCCCCCCEEEEcCcc
Confidence 7532 11 1469999987644
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.16 E-value=1.3e-10 Score=99.89 Aligned_cols=87 Identities=18% Similarity=0.101 Sum_probs=64.3
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-CCCCc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-KNGPY 229 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-~~~~f 229 (254)
..++.+|||||||+|..+..+++.. +..+|+++|+++++++.|++++...+...+..++++ ++.+|+..... ..++|
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~-~~~~D~~~~l~~~~~~f 158 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFK-LVIDDGVNFVNQTSQTF 158 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCC-EECSCSCC---CCCCCE
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceE-EEEChHHHHHhhcCCCc
Confidence 3457899999999999999998863 345899999999999999999876311001245899 99999975433 24579
Q ss_pred cEEEecCcCc
Q psy425 230 DVIHFGSGVK 239 (254)
Q Consensus 230 D~I~~~~~~~ 239 (254)
|+|++....+
T Consensus 159 DvIi~D~~~p 168 (294)
T 3adn_A 159 DVIISDCTDP 168 (294)
T ss_dssp EEEEECC---
T ss_pred cEEEECCCCc
Confidence 9999976543
No 194
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.16 E-value=5.2e-11 Score=98.43 Aligned_cols=105 Identities=16% Similarity=0.044 Sum_probs=72.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCC-HHHHHHH---HHHHHhhCCCcccCCCeeEEE
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHI-PQLINLF---MTKLKISYPKLYKLYKIMDVV 215 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s-~~~l~~a---~~~~~~~~~~~~~~~~v~~~~ 215 (254)
...+.+.. ..++.+|||||||+|.++..+++.. +..+|+|+|+| +.|++.| ++++... +..+++ +.
T Consensus 14 ~~~~~~~~---~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~-----~~~~v~-~~ 83 (225)
T 3p2e_A 14 KDELTEII---GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKG-----GLSNVV-FV 83 (225)
T ss_dssp HHHHHHHH---TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGT-----CCSSEE-EE
T ss_pred HHHHHHHh---CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHc-----CCCCeE-EE
Confidence 34444444 4688999999999999999998764 55689999999 7777766 7776654 356899 99
Q ss_pred EcCCCCCCcC-CCCccEEEecCcCcC--------chHHHHHHHHhhcC
Q psy425 216 EWDARKPYKK-NGPYDVIHFGSGVKH--------IPIEVSKLCRSQKK 254 (254)
Q Consensus 216 ~~d~~~~~~~-~~~fD~I~~~~~~~~--------~~~~l~~~lr~lk~ 254 (254)
++|+...... ...+|.|+++....+ .+..+.+..|.|||
T Consensus 84 ~~d~~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~Lkp 131 (225)
T 3p2e_A 84 IAAAESLPFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKK 131 (225)
T ss_dssp CCBTTBCCGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEE
T ss_pred EcCHHHhhhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCC
Confidence 9999864221 234666666654322 23445666677764
No 195
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.16 E-value=3.7e-10 Score=102.60 Aligned_cols=87 Identities=22% Similarity=0.192 Sum_probs=71.5
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+...+ .+.++.+|||+|||+|..+..++...+..++|+++|+++.+++.+++++... +..+++ +.++|+.
T Consensus 249 ~l~~~~l--~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~-----g~~~v~-~~~~D~~ 320 (450)
T 2yxl_A 249 AVASIVL--DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM-----GIKIVK-PLVKDAR 320 (450)
T ss_dssp HHHHHHH--CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT-----TCCSEE-EECSCTT
T ss_pred HHHHHhc--CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc-----CCCcEE-EEEcChh
Confidence 3344455 7889999999999999999999998754579999999999999999999885 456899 9999997
Q ss_pred CCC--cCCCCccEEEec
Q psy425 221 KPY--KKNGPYDVIHFG 235 (254)
Q Consensus 221 ~~~--~~~~~fD~I~~~ 235 (254)
... ...++||+|+++
T Consensus 321 ~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 321 KAPEIIGEEVADKVLLD 337 (450)
T ss_dssp CCSSSSCSSCEEEEEEE
T ss_pred hcchhhccCCCCEEEEc
Confidence 543 223569999974
No 196
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.15 E-value=2e-10 Score=105.11 Aligned_cols=83 Identities=19% Similarity=0.136 Sum_probs=66.7
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
...++.+|||||||+|.++..+++.. ..+|+|+|+++ +++.|++++..++ ..++++ ++.+|+.+...+ ++|
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~g----l~~~v~-~~~~d~~~~~~~-~~f 225 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNN----LTDRIV-VIPGKVEEVSLP-EQV 225 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTT----CTTTEE-EEESCTTTCCCS-SCE
T ss_pred hhcCCCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcC----CCCcEE-EEECchhhCccC-CCe
Confidence 44578999999999999999988853 34899999998 9999999998864 336899 999999863322 469
Q ss_pred cEEEecCcCcCc
Q psy425 230 DVIHFGSGVKHI 241 (254)
Q Consensus 230 D~I~~~~~~~~~ 241 (254)
|+|+++..+.++
T Consensus 226 D~Ivs~~~~~~~ 237 (480)
T 3b3j_A 226 DIIISEPMGYML 237 (480)
T ss_dssp EEEECCCCHHHH
T ss_pred EEEEEeCchHhc
Confidence 999998765433
No 197
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.15 E-value=3.9e-10 Score=90.86 Aligned_cols=77 Identities=22% Similarity=0.283 Sum_probs=61.3
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
..++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++. +++ ++++|+... + ++||
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~----------~~~-~~~~d~~~~-~--~~~D 112 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCG----------GVN-FMVADVSEI-S--GKYD 112 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCT----------TSE-EEECCGGGC-C--CCEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcC----------CCE-EEECcHHHC-C--CCee
Confidence 4578899999999999999998872 2379999999999999998842 688 999999763 2 5699
Q ss_pred EEEecCcCcCchH
Q psy425 231 VIHFGSGVKHIPI 243 (254)
Q Consensus 231 ~I~~~~~~~~~~~ 243 (254)
+|+++..+++.+.
T Consensus 113 ~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 113 TWIMNPPFGSVVK 125 (200)
T ss_dssp EEEECCCC-----
T ss_pred EEEECCCchhccC
Confidence 9999998876653
No 198
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.15 E-value=2.8e-10 Score=98.40 Aligned_cols=87 Identities=17% Similarity=0.121 Sum_probs=72.0
Q ss_pred HHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC
Q psy425 142 ACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK 221 (254)
Q Consensus 142 ~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~ 221 (254)
.....+ .+.++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+++|++.+ +..+++ ++++|+..
T Consensus 93 l~~~~l--~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~-----g~~~v~-~~~~D~~~ 164 (309)
T 2b9e_A 93 LPAMLL--DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA-----GVSCCE-LAEEDFLA 164 (309)
T ss_dssp HHHHHH--CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-----TCCSEE-EEECCGGG
T ss_pred HHHHHh--CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-----CCCeEE-EEeCChHh
Confidence 334555 7889999999999999999999998766689999999999999999999985 456899 99999875
Q ss_pred CCcC---CCCccEEEecC
Q psy425 222 PYKK---NGPYDVIHFGS 236 (254)
Q Consensus 222 ~~~~---~~~fD~I~~~~ 236 (254)
.... ..+||+|++..
T Consensus 165 ~~~~~~~~~~fD~Vl~D~ 182 (309)
T 2b9e_A 165 VSPSDPRYHEVHYILLDP 182 (309)
T ss_dssp SCTTCGGGTTEEEEEECC
T ss_pred cCccccccCCCCEEEEcC
Confidence 4322 14699999854
No 199
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.15 E-value=5.4e-10 Score=99.07 Aligned_cols=96 Identities=16% Similarity=0.118 Sum_probs=73.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC--CCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK--NGP 228 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~--~~~ 228 (254)
..++.+|||+| |+|.++..++... +..+|+++|+++.+++.|++++..++ ..+++ ++.+|+....+. .++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g-----~~~v~-~~~~D~~~~l~~~~~~~ 241 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIG-----YEDIE-IFTFDLRKPLPDYALHK 241 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHT-----CCCEE-EECCCTTSCCCTTTSSC
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCCEE-EEEChhhhhchhhccCC
Confidence 34689999999 9999999998874 44689999999999999999998864 34899 999999874332 357
Q ss_pred ccEEEecCcCc--CchHHHHHHHHhhcC
Q psy425 229 YDVIHFGSGVK--HIPIEVSKLCRSQKK 254 (254)
Q Consensus 229 fD~I~~~~~~~--~~~~~l~~~lr~lk~ 254 (254)
||+|+++..+. .....+.+..+.||+
T Consensus 242 fD~Vi~~~p~~~~~~~~~l~~~~~~Lkp 269 (373)
T 2qm3_A 242 FDTFITDPPETLEAIRAFVGRGIATLKG 269 (373)
T ss_dssp BSEEEECCCSSHHHHHHHHHHHHHTBCS
T ss_pred ccEEEECCCCchHHHHHHHHHHHHHccc
Confidence 99999987653 223334555566653
No 200
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.15 E-value=2.3e-10 Score=99.57 Aligned_cols=90 Identities=12% Similarity=0.089 Sum_probs=72.6
Q ss_pred HHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC
Q psy425 142 ACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK 221 (254)
Q Consensus 142 ~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~ 221 (254)
.+++.+ ...+ .+|||+|||+|..+..+++.. +..+++++|+ +.+++.|++++...+ ..++++ ++.+|+..
T Consensus 159 ~~~~~~--~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~----~~~~v~-~~~~d~~~ 228 (334)
T 2ip2_A 159 EIPRLL--DFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLL----AGERVS-LVGGDMLQ 228 (334)
T ss_dssp HHHHHS--CCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHH----HTTSEE-EEESCTTT
T ss_pred HHHHhC--CCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcC----CCCcEE-EecCCCCC
Confidence 344444 4455 899999999999999999986 5568999999 999999999987642 245799 99999987
Q ss_pred CCcCCCCccEEEecCcCcCchH
Q psy425 222 PYKKNGPYDVIHFGSGVKHIPI 243 (254)
Q Consensus 222 ~~~~~~~fD~I~~~~~~~~~~~ 243 (254)
..+ +.||+|++..++++.++
T Consensus 229 ~~~--~~~D~v~~~~vl~~~~~ 248 (334)
T 2ip2_A 229 EVP--SNGDIYLLSRIIGDLDE 248 (334)
T ss_dssp CCC--SSCSEEEEESCGGGCCH
T ss_pred CCC--CCCCEEEEchhccCCCH
Confidence 433 45999999999987764
No 201
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.15 E-value=9.1e-11 Score=106.45 Aligned_cols=89 Identities=18% Similarity=0.188 Sum_probs=73.4
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+...+ .+.++.+|||+|||+|..+..++...+..++|+++|+++.+++.+++|++.+ +..++. +.++|+.
T Consensus 95 ~l~~~~L--~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~-----g~~nv~-v~~~Da~ 166 (456)
T 3m4x_A 95 MIVGTAA--AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW-----GVSNAI-VTNHAPA 166 (456)
T ss_dssp HHHHHHH--CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH-----TCSSEE-EECCCHH
T ss_pred HHHHHHc--CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc-----CCCceE-EEeCCHH
Confidence 3445555 6789999999999999999999998766689999999999999999999986 456899 9999987
Q ss_pred CCCc-CCCCccEEEecCc
Q psy425 221 KPYK-KNGPYDVIHFGSG 237 (254)
Q Consensus 221 ~~~~-~~~~fD~I~~~~~ 237 (254)
.... ..+.||+|+++..
T Consensus 167 ~l~~~~~~~FD~Il~DaP 184 (456)
T 3m4x_A 167 ELVPHFSGFFDRIVVDAP 184 (456)
T ss_dssp HHHHHHTTCEEEEEEECC
T ss_pred HhhhhccccCCEEEECCC
Confidence 4321 2457999998754
No 202
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.14 E-value=1.2e-10 Score=101.78 Aligned_cols=86 Identities=22% Similarity=0.075 Sum_probs=67.4
Q ss_pred HHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCC--CeeEEEEcCC
Q psy425 142 ACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY--KIMDVVEWDA 219 (254)
Q Consensus 142 ~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~--~v~~~~~~d~ 219 (254)
.+.+.+. ...++.+|||+|||+|.++..++... . +|+++|+|+.+++.|++|+..++ .. +++ ++++|+
T Consensus 143 ~l~~~~~-~~~~~~~VLDlgcGtG~~sl~la~~g-a--~V~~VD~s~~al~~a~~n~~~~g-----l~~~~v~-~i~~D~ 212 (332)
T 2igt_A 143 WLKNAVE-TADRPLKVLNLFGYTGVASLVAAAAG-A--EVTHVDASKKAIGWAKENQVLAG-----LEQAPIR-WICEDA 212 (332)
T ss_dssp HHHHHHH-HSSSCCEEEEETCTTCHHHHHHHHTT-C--EEEEECSCHHHHHHHHHHHHHHT-----CTTSCEE-EECSCH
T ss_pred HHHHHHH-hcCCCCcEEEcccccCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHHcC-----CCccceE-EEECcH
Confidence 3455442 24577899999999999999999863 3 79999999999999999998864 33 499 999998
Q ss_pred CCCCcC----CCCccEEEecCc
Q psy425 220 RKPYKK----NGPYDVIHFGSG 237 (254)
Q Consensus 220 ~~~~~~----~~~fD~I~~~~~ 237 (254)
...... ..+||+|+++..
T Consensus 213 ~~~l~~~~~~~~~fD~Ii~dPP 234 (332)
T 2igt_A 213 MKFIQREERRGSTYDIILTDPP 234 (332)
T ss_dssp HHHHHHHHHHTCCBSEEEECCC
T ss_pred HHHHHHHHhcCCCceEEEECCc
Confidence 753321 457999999754
No 203
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.13 E-value=3.5e-10 Score=96.17 Aligned_cols=91 Identities=14% Similarity=0.095 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCCCh----HHHHHHHHcCC---CCEEEEEeCCHHHHHHHHHHHHhh---------------------CCC
Q psy425 153 PGANVLDLGFGSGF----MSCCMARMVGD---KGHVTAVDHIPQLINLFMTKLKIS---------------------YPK 204 (254)
Q Consensus 153 ~~~~VLDiG~G~G~----~t~~la~~~~~---~~~v~gvD~s~~~l~~a~~~~~~~---------------------~~~ 204 (254)
++.+|||+|||||. ++..+++..+. ..+|+|+|+|+++++.|+++.-.. +..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 66667776442 248999999999999999874100 000
Q ss_pred cc-----cCCCeeEEEEcCCCCC-CcCCCCccEEEecCcCcCchHH
Q psy425 205 LY-----KLYKIMDVVEWDARKP-YKKNGPYDVIHFGSGVKHIPIE 244 (254)
Q Consensus 205 ~~-----~~~~v~~~~~~d~~~~-~~~~~~fD~I~~~~~~~~~~~~ 244 (254)
.. ...+|+ |.++|+... ++..++||+|+|.+++.+++++
T Consensus 185 ~~~v~~~lr~~V~-F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~ 229 (274)
T 1af7_A 185 LVRVRQELANYVE-FSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKT 229 (274)
T ss_dssp EEEECHHHHTTEE-EEECCTTCSSCCCCCCEEEEEECSSGGGSCHH
T ss_pred ceeechhhcccCe-EEecccCCCCCCcCCCeeEEEECCchHhCCHH
Confidence 00 013699 999999864 3324579999999999888665
No 204
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.13 E-value=9.9e-11 Score=106.37 Aligned_cols=89 Identities=18% Similarity=0.133 Sum_probs=72.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+...+ .+.++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+++|++.++ .. ++ ++++|+
T Consensus 90 s~l~a~~L--~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-----~~-v~-~~~~Da 160 (464)
T 3m6w_A 90 AQAVGVLL--DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG-----AP-LA-VTQAPP 160 (464)
T ss_dssp THHHHHHH--CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-----CC-CE-EECSCH
T ss_pred HHHHHHhc--CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-----Ce-EE-EEECCH
Confidence 33445555 77899999999999999999999998666899999999999999999999864 45 88 999998
Q ss_pred CCCCc-CCCCccEEEecCc
Q psy425 220 RKPYK-KNGPYDVIHFGSG 237 (254)
Q Consensus 220 ~~~~~-~~~~fD~I~~~~~ 237 (254)
..... ..++||+|+++..
T Consensus 161 ~~l~~~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 161 RALAEAFGTYFHRVLLDAP 179 (464)
T ss_dssp HHHHHHHCSCEEEEEEECC
T ss_pred HHhhhhccccCCEEEECCC
Confidence 75321 2457999997543
No 205
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.13 E-value=6.3e-11 Score=96.87 Aligned_cols=76 Identities=24% Similarity=0.317 Sum_probs=62.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC--CCcCCCCc
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK--PYKKNGPY 229 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~--~~~~~~~f 229 (254)
.++.+|||+|||+|.++..+++. + .+++|+|+++.+++.++++. .+ +..+|+.. .....++|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~------------~~-~~~~d~~~~~~~~~~~~f 94 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL------------DH-VVLGDIETMDMPYEEEQF 94 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS------------SE-EEESCTTTCCCCSCTTCE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC------------Cc-EEEcchhhcCCCCCCCcc
Confidence 57899999999999999999887 3 48999999999999887652 25 88899874 22334679
Q ss_pred cEEEecCcCcCchH
Q psy425 230 DVIHFGSGVKHIPI 243 (254)
Q Consensus 230 D~I~~~~~~~~~~~ 243 (254)
|+|++..+++++++
T Consensus 95 D~v~~~~~l~~~~~ 108 (230)
T 3cc8_A 95 DCVIFGDVLEHLFD 108 (230)
T ss_dssp EEEEEESCGGGSSC
T ss_pred CEEEECChhhhcCC
Confidence 99999999988864
No 206
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.12 E-value=1.2e-10 Score=95.04 Aligned_cols=97 Identities=20% Similarity=0.073 Sum_probs=71.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++.. . +|+|+|+++.+++.|+++ . ++. +..+|+
T Consensus 41 ~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~--~---------~~~-~~~~~~ 103 (227)
T 3e8s_A 41 DQAILLAI--LGRQPERVLDLGCGEGWLLRALADRG-I--EAVGVDGDRTLVDAARAA--G---------AGE-VHLASY 103 (227)
T ss_dssp HHHHHHHH--HHTCCSEEEEETCTTCHHHHHHHTTT-C--EEEEEESCHHHHHHHHHT--C---------SSC-EEECCH
T ss_pred cHHHHHHh--hcCCCCEEEEeCCCCCHHHHHHHHCC-C--EEEEEcCCHHHHHHHHHh--c---------ccc-cchhhH
Confidence 34456666 44567999999999999999998873 3 799999999999999886 1 566 777877
Q ss_pred CCC----CcCCCCccEEEecCcCc--CchHHHHHHHHhhc
Q psy425 220 RKP----YKKNGPYDVIHFGSGVK--HIPIEVSKLCRSQK 253 (254)
Q Consensus 220 ~~~----~~~~~~fD~I~~~~~~~--~~~~~l~~~lr~lk 253 (254)
... .....+||+|++..+++ .....+.+..+.||
T Consensus 104 ~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~ 143 (227)
T 3e8s_A 104 AQLAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLV 143 (227)
T ss_dssp HHHHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEE
T ss_pred HhhcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhC
Confidence 632 23345699999999886 33344555556665
No 207
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.11 E-value=9.1e-11 Score=100.38 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=70.5
Q ss_pred HHHHHHhhhcCC-CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEE-EcC
Q psy425 141 AACLQHLSDKLL-PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVV-EWD 218 (254)
Q Consensus 141 ~~~l~~l~~~~~-~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~-~~d 218 (254)
..+++.+ .+. ++.+|||+|||||.++..+++... ++|+|+|++++|++.+.++- .++. .. ..|
T Consensus 74 ~~~l~~~--~~~~~g~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~----------~rv~-~~~~~n 138 (291)
T 3hp7_A 74 EKALAVF--NLSVEDMITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQD----------DRVR-SMEQYN 138 (291)
T ss_dssp HHHHHHT--TCCCTTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTC----------TTEE-EECSCC
T ss_pred HHHHHhc--CCCccccEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhC----------cccc-eecccC
Confidence 4445555 343 578999999999999999988743 37999999999998864431 2332 22 234
Q ss_pred CCCCC---cCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 219 ARKPY---KKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 219 ~~~~~---~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
+.... .+..+||+|++..++.++...+.+..+.|||
T Consensus 139 i~~l~~~~l~~~~fD~v~~d~sf~sl~~vL~e~~rvLkp 177 (291)
T 3hp7_A 139 FRYAEPVDFTEGLPSFASIDVSFISLNLILPALAKILVD 177 (291)
T ss_dssp GGGCCGGGCTTCCCSEEEECCSSSCGGGTHHHHHHHSCT
T ss_pred ceecchhhCCCCCCCEEEEEeeHhhHHHHHHHHHHHcCc
Confidence 33211 1223499999999999998888888898885
No 208
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.10 E-value=6.7e-10 Score=92.78 Aligned_cols=48 Identities=21% Similarity=0.269 Sum_probs=41.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHh
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKI 200 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~ 200 (254)
++.+|||+|||+|.++..+++.. .+..+|+|+|+++.+++.|++++..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~ 99 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLAL 99 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHH
Confidence 56899999999999999999872 1234799999999999999988765
No 209
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.10 E-value=1.9e-10 Score=89.79 Aligned_cols=82 Identities=22% Similarity=0.275 Sum_probs=62.9
Q ss_pred HHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC
Q psy425 142 ACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK 221 (254)
Q Consensus 142 ~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~ 221 (254)
.+++.+. .+.++.+|||+|||+|.++..+++..++..+++++|+++ +++. .+++ +..+|+..
T Consensus 12 ~~~~~~~-~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~~-~~~~d~~~ 73 (180)
T 1ej0_A 12 EIQQSDK-LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGVD-FLQGDFRD 73 (180)
T ss_dssp HHHHHHC-CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTEE-EEESCTTS
T ss_pred HHHHHhC-CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcEE-EEEccccc
Confidence 3444441 367889999999999999999999865556899999998 6421 3788 99999986
Q ss_pred CC--------cCCCCccEEEecCcCcCc
Q psy425 222 PY--------KKNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 222 ~~--------~~~~~fD~I~~~~~~~~~ 241 (254)
.. ...++||+|+++.+++..
T Consensus 74 ~~~~~~~~~~~~~~~~D~i~~~~~~~~~ 101 (180)
T 1ej0_A 74 ELVMKALLERVGDSKVQVVMSDMAPNMS 101 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred chhhhhhhccCCCCceeEEEECCCcccc
Confidence 43 344679999998887544
No 210
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.09 E-value=4.4e-10 Score=93.93 Aligned_cols=85 Identities=19% Similarity=0.169 Sum_probs=66.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++..+++.+ .+|+|+|+++++++.+++++.. .++++ ++++|+
T Consensus 19 ~~~i~~~~--~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~-------~~~v~-~~~~D~ 85 (244)
T 1qam_A 19 IDKIMTNI--RLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD-------HDNFQ-VLNKDI 85 (244)
T ss_dssp HHHHHTTC--CCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT-------CCSEE-EECCCG
T ss_pred HHHHHHhC--CCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc-------CCCeE-EEEChH
Confidence 56666666 66788999999999999999999986 3799999999999999998754 25899 999999
Q ss_pred CCCCcC-CCCccEEEecCcC
Q psy425 220 RKPYKK-NGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~~~-~~~fD~I~~~~~~ 238 (254)
...... ...| .|+++..+
T Consensus 86 ~~~~~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 86 LQFKFPKNQSY-KIFGNIPY 104 (244)
T ss_dssp GGCCCCSSCCC-EEEEECCG
T ss_pred HhCCcccCCCe-EEEEeCCc
Confidence 854333 2345 46665544
No 211
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.08 E-value=8.4e-10 Score=98.51 Aligned_cols=91 Identities=15% Similarity=0.026 Sum_probs=73.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCC-------------------------------------CCEEE
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGD-------------------------------------KGHVT 182 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~-------------------------------------~~~v~ 182 (254)
.+.++... ...++..|||.+||||.+++.++..... ..+|+
T Consensus 190 Aa~ll~l~--~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 267 (393)
T 3k0b_A 190 AAALVLLT--SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNII 267 (393)
T ss_dssp HHHHHHHS--CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHh--CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEE
Confidence 45555555 6778899999999999999998887532 14699
Q ss_pred EEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEEecCcC
Q psy425 183 AVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGV 238 (254)
Q Consensus 183 gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~~~~~~ 238 (254)
|+|+++.+++.|++|+..++ ...+++ +.++|+...... .+||+|+++..+
T Consensus 268 GvDid~~al~~Ar~Na~~~g----l~~~I~-~~~~D~~~~~~~-~~fD~Iv~NPPY 317 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAG----LGDLIT-FRQLQVADFQTE-DEYGVVVANPPY 317 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTT----CTTCSE-EEECCGGGCCCC-CCSCEEEECCCC
T ss_pred EEECCHHHHHHHHHHHHHcC----CCCceE-EEECChHhCCCC-CCCCEEEECCCC
Confidence 99999999999999999864 334699 999999865443 469999999765
No 212
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.08 E-value=6.6e-10 Score=94.74 Aligned_cols=71 Identities=15% Similarity=0.137 Sum_probs=60.9
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d 218 (254)
...+++.+ .+.++.+|||||||+|.++..+++.+.. .++|+|+|+++++++.++++. . .+++ ++++|
T Consensus 31 ~~~iv~~~--~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~--------~~v~-~i~~D 98 (279)
T 3uzu_A 31 IDAIVAAI--RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G--------ELLE-LHAGD 98 (279)
T ss_dssp HHHHHHHH--CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G--------GGEE-EEESC
T ss_pred HHHHHHhc--CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C--------CCcE-EEECC
Confidence 67788888 7889999999999999999999998743 255999999999999999984 2 2799 99999
Q ss_pred CCCC
Q psy425 219 ARKP 222 (254)
Q Consensus 219 ~~~~ 222 (254)
+...
T Consensus 99 ~~~~ 102 (279)
T 3uzu_A 99 ALTF 102 (279)
T ss_dssp GGGC
T ss_pred hhcC
Confidence 9853
No 213
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.08 E-value=2.7e-10 Score=98.50 Aligned_cols=77 Identities=21% Similarity=0.138 Sum_probs=62.6
Q ss_pred CEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc--CCCCccEE
Q psy425 155 ANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK--KNGPYDVI 232 (254)
Q Consensus 155 ~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~--~~~~fD~I 232 (254)
.+|||||||+|.++..+++.. +..+|++||+++.+++.|++++... ...+++ ++++|+..... ..++||+|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~-----~~~rv~-v~~~Da~~~l~~~~~~~fDvI 163 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIP-----RAPRVK-IRVDDARMVAESFTPASRDVI 163 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCC-----CTTTEE-EEESCHHHHHHTCCTTCEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhcccc-----CCCceE-EEECcHHHHHhhccCCCCCEE
Confidence 499999999999999999875 4458999999999999999997642 346899 99999874321 24579999
Q ss_pred EecCcC
Q psy425 233 HFGSGV 238 (254)
Q Consensus 233 ~~~~~~ 238 (254)
++....
T Consensus 164 i~D~~~ 169 (317)
T 3gjy_A 164 IRDVFA 169 (317)
T ss_dssp EECCST
T ss_pred EECCCC
Confidence 997543
No 214
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.08 E-value=3.4e-10 Score=97.69 Aligned_cols=100 Identities=17% Similarity=0.038 Sum_probs=70.2
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc--CCCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK--KNGP 228 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~--~~~~ 228 (254)
..++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++..... .....+++ ++.+|+..... ..++
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~-~~~~~~v~-~~~~D~~~~~~~~~~~~ 169 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISR-SLADPRAT-VRVGDGLAFVRQTPDNT 169 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHG-GGGCTTEE-EEESCHHHHHHSSCTTC
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhc-ccCCCcEE-EEECcHHHHHHhccCCc
Confidence 3567899999999999999998763 345899999999999999998743100 01346899 99999874332 2567
Q ss_pred ccEEEecCcCcCch-------HHHHHHHHhhc
Q psy425 229 YDVIHFGSGVKHIP-------IEVSKLCRSQK 253 (254)
Q Consensus 229 fD~I~~~~~~~~~~-------~~l~~~lr~lk 253 (254)
||+|+++...+..| +.+.+..+.||
T Consensus 170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lk 201 (304)
T 3bwc_A 170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILK 201 (304)
T ss_dssp EEEEEEECC---------CCHHHHHHHHHHEE
T ss_pred eeEEEECCCCccccchhhhHHHHHHHHHHhcC
Confidence 99999987654432 33444555555
No 215
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.08 E-value=1.7e-10 Score=103.20 Aligned_cols=80 Identities=18% Similarity=0.127 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCccc-CCCeeEEEEcCCCCCCcC----C
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYK-LYKIMDVVEWDARKPYKK----N 226 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~-~~~v~~~~~~d~~~~~~~----~ 226 (254)
.++.+|||+|||+|.++..++..+. .+|+|+|+++.+++.|++|+..++ . .++++ ++.+|+...... .
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ng----l~~~~v~-~~~~D~~~~~~~~~~~~ 291 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNK----LDLSKAE-FVRDDVFKLLRTYRDRG 291 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTT----CCGGGEE-EEESCHHHHHHHHHHTT
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcC----CCccceE-EEECCHHHHHHHHHhcC
Confidence 5789999999999999999998742 379999999999999999999864 2 23899 999998753221 3
Q ss_pred CCccEEEecCcC
Q psy425 227 GPYDVIHFGSGV 238 (254)
Q Consensus 227 ~~fD~I~~~~~~ 238 (254)
.+||+|+++...
T Consensus 292 ~~fD~Ii~dpP~ 303 (396)
T 3c0k_A 292 EKFDVIVMDPPK 303 (396)
T ss_dssp CCEEEEEECCSS
T ss_pred CCCCEEEECCCC
Confidence 569999998543
No 216
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.07 E-value=7.1e-10 Score=89.18 Aligned_cols=73 Identities=15% Similarity=0.175 Sum_probs=58.3
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC------
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY------ 223 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~------ 223 (254)
+.++.+|||+|||+|.++..+++..++ .++|+|+|+++.. ...+++ ++++|+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------------~~~~v~-~~~~d~~~~~~~~~~~ 82 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------------PIPNVY-FIQGEIGKDNMNNIKN 82 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------------CCTTCE-EEECCTTTTSSCCC--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------------CCCCce-EEEccccchhhhhhcc
Confidence 578899999999999999999998743 5689999999831 134788 9999997643
Q ss_pred -------------------cCCCCccEEEecCcCcC
Q psy425 224 -------------------KKNGPYDVIHFGSGVKH 240 (254)
Q Consensus 224 -------------------~~~~~fD~I~~~~~~~~ 240 (254)
...++||+|+++.+++.
T Consensus 83 ~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~ 118 (201)
T 2plw_A 83 INYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPC 118 (201)
T ss_dssp ---------CHHHHHHHHHHTTCCEEEEEECCCCCC
T ss_pred ccccccccchhhHHHHHhhcCCCcccEEEeCCCcCC
Confidence 23457999999887654
No 217
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.07 E-value=6e-10 Score=100.58 Aligned_cols=87 Identities=24% Similarity=0.278 Sum_probs=70.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+...+ ...++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.+++++..++ . +++ +.++|+
T Consensus 235 s~~~~~~l--~~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g-----~-~~~-~~~~D~ 304 (429)
T 1sqg_A 235 AQGCMTWL--APQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLG-----M-KAT-VKQGDG 304 (429)
T ss_dssp HHTHHHHH--CCCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTT-----C-CCE-EEECCT
T ss_pred HHHHHHHc--CCCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcC-----C-CeE-EEeCch
Confidence 34445555 678999999999999999999999874 3789999999999999999998853 2 578 999999
Q ss_pred CCCC--cCCCCccEEEecC
Q psy425 220 RKPY--KKNGPYDVIHFGS 236 (254)
Q Consensus 220 ~~~~--~~~~~fD~I~~~~ 236 (254)
.... ...++||+|+++.
T Consensus 305 ~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 305 RYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp TCTHHHHTTCCEEEEEEEC
T ss_pred hhchhhcccCCCCEEEEeC
Confidence 7643 2335799999754
No 218
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.07 E-value=1.3e-09 Score=90.21 Aligned_cols=80 Identities=11% Similarity=-0.034 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccE
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDV 231 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~ 231 (254)
.++.+|||||||+|-++..+. +..+++|+|+++.+++.+++++..+ ..+.. +.++|.....++. +||+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~------g~~~~-~~v~D~~~~~~~~-~~Dv 171 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREK------DWDFT-FALQDVLCAPPAE-AGDL 171 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHT------TCEEE-EEECCTTTSCCCC-BCSE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhc------CCCce-EEEeecccCCCCC-Ccch
Confidence 578899999999999998877 4458999999999999999998874 35788 9999998655544 6999
Q ss_pred EEecCcCcCchH
Q psy425 232 IHFGSGVKHIPI 243 (254)
Q Consensus 232 I~~~~~~~~~~~ 243 (254)
|++.-+++++..
T Consensus 172 vLllk~lh~LE~ 183 (253)
T 3frh_A 172 ALIFKLLPLLER 183 (253)
T ss_dssp EEEESCHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 999998887754
No 219
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.07 E-value=4.7e-10 Score=98.07 Aligned_cols=82 Identities=17% Similarity=0.141 Sum_probs=64.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh--CCCcccCCCeeEEEEcCCCCCC--cCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKIS--YPKLYKLYKIMDVVEWDARKPY--KKN 226 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~~~~v~~~~~~d~~~~~--~~~ 226 (254)
...+.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++... + +...+++ ++.+|+.... ...
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~g---l~~~rv~-~~~~D~~~~l~~~~~ 192 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIG---YEDPRVN-LVIGDGVAFLKNAAE 192 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG---GGSTTEE-EEESCHHHHHHTSCT
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccc---cCCCcEE-EEECCHHHHHHhccC
Confidence 4567899999999999999998764 3468999999999999999998652 1 1246899 9999986432 124
Q ss_pred CCccEEEecCc
Q psy425 227 GPYDVIHFGSG 237 (254)
Q Consensus 227 ~~fD~I~~~~~ 237 (254)
++||+|+++..
T Consensus 193 ~~fDlIi~d~~ 203 (334)
T 1xj5_A 193 GSYDAVIVDSS 203 (334)
T ss_dssp TCEEEEEECCC
T ss_pred CCccEEEECCC
Confidence 57999999765
No 220
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.06 E-value=4.6e-10 Score=93.85 Aligned_cols=105 Identities=12% Similarity=-0.001 Sum_probs=80.6
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+...+...+.+..+|||||||+|-++..++... +..+|+++|+++.+++.+++++..+| .+.+ +.+.|.
T Consensus 119 lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g------~~~~-~~v~D~ 190 (281)
T 3lcv_B 119 LDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLN------VPHR-TNVADL 190 (281)
T ss_dssp HHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTT------CCEE-EEECCT
T ss_pred HHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcC------CCce-EEEeee
Confidence 333444444355668899999999999999988764 56799999999999999999998853 3478 999999
Q ss_pred CCCCcCCCCccEEEecCcCcCchHH----HHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKHIPIE----VSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~~~~~----l~~~lr~lk 253 (254)
....++ ++||+|++.-+++++.+. ..+.+..|+
T Consensus 191 ~~~~p~-~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~ 227 (281)
T 3lcv_B 191 LEDRLD-EPADVTLLLKTLPCLETQQRGSGWEVIDIVN 227 (281)
T ss_dssp TTSCCC-SCCSEEEETTCHHHHHHHSTTHHHHHHHHSS
T ss_pred cccCCC-CCcchHHHHHHHHHhhhhhhHHHHHHHHHhC
Confidence 865544 459999999999888663 335555443
No 221
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.06 E-value=3.1e-10 Score=100.50 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=69.2
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC---cCC----
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY---KKN---- 226 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~---~~~---- 226 (254)
+.+|||+|||+|.+++.+|+.. . +|+|+|+++++++.|++|+..++ ..+++ |+.+|+.+.. ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~-~--~V~gvd~~~~ai~~a~~n~~~ng-----~~~v~-~~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF-D--RVLATEIAKPSVAAAQYNIAANH-----IDNVQ-IIRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS-S--EEEEECCCHHHHHHHHHHHHHTT-----CCSEE-EECCCSHHHHHHHSSCCCCT
T ss_pred CCEEEEccCCCCHHHHHHHhcC-C--EEEEEECCHHHHHHHHHHHHHcC-----CCceE-EEECCHHHHHHHHhhccccc
Confidence 6789999999999999998754 2 79999999999999999998863 56899 9999986421 111
Q ss_pred ---------CCccEEEecCcCcCchHHHHHHHH
Q psy425 227 ---------GPYDVIHFGSGVKHIPIEVSKLCR 250 (254)
Q Consensus 227 ---------~~fD~I~~~~~~~~~~~~l~~~lr 250 (254)
..||+|+++.....+...+.+.++
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~ 317 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQ 317 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTCCCHHHHHHHT
T ss_pred cccccccccCCCCEEEECcCccccHHHHHHHHh
Confidence 269999998766555555555554
No 222
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.06 E-value=4.4e-10 Score=95.16 Aligned_cols=97 Identities=22% Similarity=0.160 Sum_probs=69.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCC--ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEc
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGS--GFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEW 217 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~--G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~ 217 (254)
..+++..+. .-....+|||||||+ +..+..+++...+..+|+++|.|+.|++.|++++... ...+++ ++++
T Consensus 66 l~rav~~l~-~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~-----~~~~~~-~v~a 138 (277)
T 3giw_A 66 MNRAVAHLA-KEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST-----PEGRTA-YVEA 138 (277)
T ss_dssp HHHHHHHHH-HTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC-----SSSEEE-EEEC
T ss_pred HHHHHHHhc-cccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC-----CCCcEE-EEEe
Confidence 444555552 112347999999997 4455666666557789999999999999999988652 234799 9999
Q ss_pred CCCCCCc----C--CCCcc-----EEEecCcCcCchH
Q psy425 218 DARKPYK----K--NGPYD-----VIHFGSGVKHIPI 243 (254)
Q Consensus 218 d~~~~~~----~--~~~fD-----~I~~~~~~~~~~~ 243 (254)
|+..... . .+.|| .|+++++++++++
T Consensus 139 D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d 175 (277)
T 3giw_A 139 DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLD 175 (277)
T ss_dssp CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCG
T ss_pred cccChhhhhcccccccccCcCCcchHHhhhhHhcCCc
Confidence 9986310 0 23355 6889999999977
No 223
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.05 E-value=4.2e-10 Score=98.75 Aligned_cols=99 Identities=16% Similarity=0.051 Sum_probs=71.9
Q ss_pred HHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC
Q psy425 142 ACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK 221 (254)
Q Consensus 142 ~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~ 221 (254)
.+++.+ .+.++.+|||||||+|..+..+++.. +..+++++|+ +.++. +++....+ ..++++ ++.+|+..
T Consensus 175 ~~~~~~--~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~~~----~~~~v~-~~~~d~~~ 243 (348)
T 3lst_A 175 ILARAG--DFPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDAPD----VAGRWK-VVEGDFLR 243 (348)
T ss_dssp HHHHHS--CCCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCCGG----GTTSEE-EEECCTTT
T ss_pred HHHHhC--CccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccccC----CCCCeE-EEecCCCC
Confidence 444554 56778999999999999999999986 5568999999 45554 33332221 345799 99999974
Q ss_pred CCcCCCCccEEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 222 PYKKNGPYDVIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 222 ~~~~~~~fD~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
..+ +||+|++..+++++++. +.+..+.|||
T Consensus 244 ~~p---~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lkp 278 (348)
T 3lst_A 244 EVP---HADVHVLKRILHNWGDEDSVRILTNCRRVMPA 278 (348)
T ss_dssp CCC---CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCT
T ss_pred CCC---CCcEEEEehhccCCCHHHHHHHHHHHHHhcCC
Confidence 443 69999999999988765 4444455553
No 224
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.05 E-value=8e-10 Score=98.42 Aligned_cols=91 Identities=16% Similarity=0.008 Sum_probs=72.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCC-------------------------------------CCEEE
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGD-------------------------------------KGHVT 182 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~-------------------------------------~~~v~ 182 (254)
.+.++... ...++.+|||++||||.+++.++..... ..+|+
T Consensus 184 Aa~ll~~~--~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 184 AAGLIYLT--PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHTS--CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHhh--CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 44444444 6678899999999999999999887521 14699
Q ss_pred EEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEEecCcC
Q psy425 183 AVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGV 238 (254)
Q Consensus 183 gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~~~~~~ 238 (254)
|+|+++.+++.|++|+..++ ..++++ +.++|+.+...+ .+||+|+++..+
T Consensus 262 GvDid~~ai~~Ar~Na~~~g----l~~~i~-~~~~D~~~l~~~-~~~D~Iv~NPPy 311 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAG----VDEYIE-FNVGDATQFKSE-DEFGFIITNPPY 311 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHT----CGGGEE-EEECCGGGCCCS-CBSCEEEECCCC
T ss_pred EEECCHHHHHHHHHHHHHcC----CCCceE-EEECChhhcCcC-CCCcEEEECCCC
Confidence 99999999999999999874 334799 999999864433 469999999876
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.05 E-value=4.8e-10 Score=97.20 Aligned_cols=88 Identities=17% Similarity=0.078 Sum_probs=66.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-cCCCCc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-KKNGPY 229 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-~~~~~f 229 (254)
...+.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...+...+..++++ ++.+|+.... ...++|
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~-~~~~D~~~~l~~~~~~f 152 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAV-LVIDDARAYLERTEERY 152 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEE-EEESCHHHHHHHCCCCE
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceE-EEEchHHHHHHhcCCCc
Confidence 3466899999999999999998764 345899999999999999998764110000146899 9999987422 124579
Q ss_pred cEEEecCcCcC
Q psy425 230 DVIHFGSGVKH 240 (254)
Q Consensus 230 D~I~~~~~~~~ 240 (254)
|+|++....+.
T Consensus 153 D~Ii~d~~~~~ 163 (314)
T 1uir_A 153 DVVIIDLTDPV 163 (314)
T ss_dssp EEEEEECCCCB
T ss_pred cEEEECCCCcc
Confidence 99999876654
No 226
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.05 E-value=1.6e-09 Score=96.31 Aligned_cols=91 Identities=11% Similarity=0.028 Sum_probs=73.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCC-------------------------------------CCEEE
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGD-------------------------------------KGHVT 182 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~-------------------------------------~~~v~ 182 (254)
.+.++... ...++..|||.+||||.+++.++..... ..+|+
T Consensus 183 Aaall~l~--~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 183 AAAIILLS--NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHT--TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHh--CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 44455555 6778999999999999999998877532 14699
Q ss_pred EEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEEecCcC
Q psy425 183 AVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGV 238 (254)
Q Consensus 183 gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~~~~~~ 238 (254)
|+|+++.+++.|++|+..++ ...+++ +.++|+...... .+||+|+++..+
T Consensus 261 GvDid~~al~~Ar~Na~~~g----l~~~I~-~~~~D~~~l~~~-~~fD~Iv~NPPY 310 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVG----LEDVVK-LKQMRLQDFKTN-KINGVLISNPPY 310 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTT----CTTTEE-EEECCGGGCCCC-CCSCEEEECCCC
T ss_pred EEECCHHHHHHHHHHHHHcC----CCCceE-EEECChHHCCcc-CCcCEEEECCch
Confidence 99999999999999999864 334699 999999865443 469999999765
No 227
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.05 E-value=3e-10 Score=101.46 Aligned_cols=80 Identities=19% Similarity=0.194 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc----CCC
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK----KNG 227 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~----~~~ 227 (254)
.++.+|||+|||+|.++..++... ..+|+|+|+++.+++.|++|+..++ ..++++ ++++|+..... ...
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~n~----~~~~v~-~~~~d~~~~~~~~~~~~~ 288 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKLNG----VEDRMK-FIVGSAFEEMEKLQKKGE 288 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTT----CGGGEE-EEESCHHHHHHHHHHTTC
T ss_pred hCCCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcC----CCccce-EEECCHHHHHHHHHhhCC
Confidence 488999999999999999999873 2379999999999999999998864 223899 99999875322 145
Q ss_pred CccEEEecCcC
Q psy425 228 PYDVIHFGSGV 238 (254)
Q Consensus 228 ~fD~I~~~~~~ 238 (254)
+||+|+++...
T Consensus 289 ~fD~Vi~dpP~ 299 (396)
T 2as0_A 289 KFDIVVLDPPA 299 (396)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999997644
No 228
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.03 E-value=1.3e-10 Score=98.01 Aligned_cols=83 Identities=18% Similarity=0.098 Sum_probs=65.1
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCH-------HHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIP-------QLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP 222 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~-------~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~ 222 (254)
...++.+|||+|||+|..++.++..+. +|+++|+++ ++++.|++|+..++ ...+++ ++++|+...
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~---~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~----~~~ri~-~~~~d~~~~ 151 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGL---TVTAFEQHPAVACLLSDGIRRALLNPETQD----TAARIN-LHFGNAAEQ 151 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTC---CEEEEECCHHHHHHHHHHHHHHHHSHHHHH----HHTTEE-EEESCHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCC---EEEEEECChhhhHHHHHHHHHHHhHHHhhC----CccCeE-EEECCHHHH
Confidence 455778999999999999999998743 699999999 99999999887652 223599 999998753
Q ss_pred Cc--CC--CCccEEEecCcCcC
Q psy425 223 YK--KN--GPYDVIHFGSGVKH 240 (254)
Q Consensus 223 ~~--~~--~~fD~I~~~~~~~~ 240 (254)
.. .. ++||+|+++..+++
T Consensus 152 l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 152 MPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHCCCSEEEECCCC--
T ss_pred HHhhhccCCCccEEEECCCCCC
Confidence 22 22 56999999987754
No 229
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.03 E-value=8.7e-10 Score=90.15 Aligned_cols=81 Identities=14% Similarity=0.225 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEE
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVI 232 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I 232 (254)
++.+|||+|||+|.++..++.. +|+|+++.+++.++++ +++ +..+|+.......++||+|
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~------------~~~-~~~~d~~~~~~~~~~fD~v 106 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR------------GVF-VLKGTAENLPLKDESFDFA 106 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT------------TCE-EEECBTTBCCSCTTCEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc------------CCE-EEEcccccCCCCCCCeeEE
Confidence 4889999999999998876532 9999999999998875 477 9999987644445679999
Q ss_pred EecCcCcCchH---HHHHHHHhhc
Q psy425 233 HFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 233 ~~~~~~~~~~~---~l~~~lr~lk 253 (254)
++..+++++++ .+.+..+.||
T Consensus 107 ~~~~~l~~~~~~~~~l~~~~~~L~ 130 (219)
T 1vlm_A 107 LMVTTICFVDDPERALKEAYRILK 130 (219)
T ss_dssp EEESCGGGSSCHHHHHHHHHHHEE
T ss_pred EEcchHhhccCHHHHHHHHHHHcC
Confidence 99999987753 2444445554
No 230
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.03 E-value=3e-11 Score=108.45 Aligned_cols=100 Identities=14% Similarity=0.084 Sum_probs=66.8
Q ss_pred HHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCC
Q psy425 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220 (254)
Q Consensus 141 ~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~ 220 (254)
..+++.+ .+.++.+|||||||+|.++..+++.. . +|+|+|+++.+++.|+++-.. ..... +...+..
T Consensus 97 ~~l~~~~--~~~~~~~VLDiGcG~G~~~~~l~~~g-~--~v~gvD~s~~~~~~a~~~~~~-------~~~~~-~~~~~~~ 163 (416)
T 4e2x_A 97 RDFLATE--LTGPDPFIVEIGCNDGIMLRTIQEAG-V--RHLGFEPSSGVAAKAREKGIR-------VRTDF-FEKATAD 163 (416)
T ss_dssp HHHHHTT--TCSSSCEEEEETCTTTTTHHHHHHTT-C--EEEEECCCHHHHHHHHTTTCC-------EECSC-CSHHHHH
T ss_pred HHHHHHh--CCCCCCEEEEecCCCCHHHHHHHHcC-C--cEEEECCCHHHHHHHHHcCCC-------cceee-echhhHh
Confidence 3344444 45678999999999999999999874 3 799999999999998876100 00111 1122222
Q ss_pred CCCcCCCCccEEEecCcCcCchH---HHHHHHHhhc
Q psy425 221 KPYKKNGPYDVIHFGSGVKHIPI---EVSKLCRSQK 253 (254)
Q Consensus 221 ~~~~~~~~fD~I~~~~~~~~~~~---~l~~~lr~lk 253 (254)
......++||+|++..+++|+++ .+.+..+.||
T Consensus 164 ~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~Lk 199 (416)
T 4e2x_A 164 DVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLA 199 (416)
T ss_dssp HHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEE
T ss_pred hcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcC
Confidence 21223467999999999998874 2444445555
No 231
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.03 E-value=5.2e-10 Score=95.45 Aligned_cols=83 Identities=22% Similarity=0.043 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcc-------cCCCeeEEEEcCCCCCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLY-------KLYKIMDVVEWDARKPY 223 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-------~~~~v~~~~~~d~~~~~ 223 (254)
...+.+|||||||+|.++..+++. +..+|+++|+++.+++.|++++ .... .+ ..++++ ++.+|+....
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~-~l~~~~~~~~~~~v~-~~~~D~~~~l 147 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDN-GLLEAMLNGKHEKAK-LTIGDGFEFI 147 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTT-THHHHHHTTCCSSEE-EEESCHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhcc-ccccccccCCCCcEE-EEECchHHHh
Confidence 346789999999999999999887 3458999999999999999998 3200 01 245799 9999986422
Q ss_pred cCCCCccEEEecCcC
Q psy425 224 KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 ~~~~~fD~I~~~~~~ 238 (254)
...++||+|++....
T Consensus 148 ~~~~~fD~Ii~d~~~ 162 (281)
T 1mjf_A 148 KNNRGFDVIIADSTD 162 (281)
T ss_dssp HHCCCEEEEEEECCC
T ss_pred cccCCeeEEEECCCC
Confidence 114569999998754
No 232
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.03 E-value=1e-09 Score=94.31 Aligned_cols=83 Identities=17% Similarity=0.026 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-cCCCCcc
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-KKNGPYD 230 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-~~~~~fD 230 (254)
..+.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...+. .+..++++ ++.+|+.... ...++||
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~-~~~~~~v~-~~~~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSC-GFDDPRAE-IVIANGAEYVRKFKNEFD 165 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHG-GGGCTTEE-EEESCHHHHGGGCSSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhcc-ccCCCceE-EEECcHHHHHhhCCCCce
Confidence 456899999999999999998774 345899999999999999999754100 01246899 9999986422 2245699
Q ss_pred EEEecCc
Q psy425 231 VIHFGSG 237 (254)
Q Consensus 231 ~I~~~~~ 237 (254)
+|+++..
T Consensus 166 ~Ii~d~~ 172 (296)
T 1inl_A 166 VIIIDST 172 (296)
T ss_dssp EEEEEC-
T ss_pred EEEEcCC
Confidence 9998654
No 233
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.03 E-value=8.2e-10 Score=96.58 Aligned_cols=91 Identities=19% Similarity=0.130 Sum_probs=69.7
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.++.+|||+|||+|.++.. ++. ..+|+|+|+++.+++.|++|+..++ ...+++ ++++|+.... ++|
T Consensus 192 ~~~~~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~----l~~~v~-~~~~D~~~~~---~~f 259 (336)
T 2yx1_A 192 KVSLNDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNK----LEHKII-PILSDVREVD---VKG 259 (336)
T ss_dssp HCCTTCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTT----CTTTEE-EEESCGGGCC---CCE
T ss_pred hcCCCCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcC----CCCcEE-EEECChHHhc---CCC
Confidence 456899999999999999999 762 3489999999999999999999874 235899 9999998644 669
Q ss_pred cEEEecCcCcCchHHHHHHHHhhc
Q psy425 230 DVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 230 D~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
|+|+++... .....+.+.++.|+
T Consensus 260 D~Vi~dpP~-~~~~~l~~~~~~L~ 282 (336)
T 2yx1_A 260 NRVIMNLPK-FAHKFIDKALDIVE 282 (336)
T ss_dssp EEEEECCTT-TGGGGHHHHHHHEE
T ss_pred cEEEECCcH-hHHHHHHHHHHHcC
Confidence 999997532 22233444444443
No 234
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.02 E-value=5.5e-10 Score=99.52 Aligned_cols=80 Identities=20% Similarity=0.114 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCC-CeeEEEEcCCCCCCc----CC
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY-KIMDVVEWDARKPYK----KN 226 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~-~v~~~~~~d~~~~~~----~~ 226 (254)
.++.+|||+|||+|.++..++.... .+|+++|+++.+++.|++|+..++ ..+ +++ ++++|+..... ..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga--~~V~~vD~s~~al~~A~~N~~~n~----~~~~~v~-~~~~D~~~~l~~~~~~~ 283 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA--MATTSVDLAKRSRALSLAHFEANH----LDMANHQ-LVVMDVFDYFKYARRHH 283 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB--SEEEEEESCTTHHHHHHHHHHHTT----CCCTTEE-EEESCHHHHHHHHHHTT
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcC----CCccceE-EEECCHHHHHHHHHHhC
Confidence 6789999999999999999998642 279999999999999999999874 223 899 99999864221 13
Q ss_pred CCccEEEecCcC
Q psy425 227 GPYDVIHFGSGV 238 (254)
Q Consensus 227 ~~fD~I~~~~~~ 238 (254)
.+||+|+++...
T Consensus 284 ~~fD~Ii~DPP~ 295 (385)
T 2b78_A 284 LTYDIIIIDPPS 295 (385)
T ss_dssp CCEEEEEECCCC
T ss_pred CCccEEEECCCC
Confidence 479999997543
No 235
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.01 E-value=1.5e-09 Score=92.37 Aligned_cols=99 Identities=18% Similarity=0.013 Sum_probs=71.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-CCCCcc
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-KNGPYD 230 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-~~~~fD 230 (254)
..+.+|||||||+|.++..+++.. +..+|+++|+++++++.|++++..... .+..++++ ++.+|+..... ..++||
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~-~~~~~rv~-v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAG-KLDDPRVD-VQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHT-TTTSTTEE-EEESCSHHHHHTCCSCEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhcc-ccCCCceE-EEECcHHHHHhhCCCCee
Confidence 357899999999999999988763 335899999999999999999754200 01246899 99999874221 245799
Q ss_pred EEEecCcCcCc-------hHHHHHHHHhhc
Q psy425 231 VIHFGSGVKHI-------PIEVSKLCRSQK 253 (254)
Q Consensus 231 ~I~~~~~~~~~-------~~~l~~~lr~lk 253 (254)
+|++....+.. .+.+.+..+.||
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~ 180 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALK 180 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcC
Confidence 99998654322 344555556665
No 236
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.00 E-value=1e-09 Score=94.73 Aligned_cols=83 Identities=18% Similarity=0.066 Sum_probs=64.4
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHh--hCCCcccCCCeeEEEEcCCCCCC-cCCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKI--SYPKLYKLYKIMDVVEWDARKPY-KKNG 227 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~--~~~~~~~~~~v~~~~~~d~~~~~-~~~~ 227 (254)
...+.+|||||||+|..+..+++.. +..+|+++|+++++++.|++++.. .+ +..++++ ++.+|+.... ...+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~---~~~~rv~-v~~~Da~~~l~~~~~ 167 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIG---YSSSKLT-LHVGDGFEFMKQNQD 167 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG---GGCTTEE-EEESCHHHHHHTCSS
T ss_pred CCCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcc---cCCCcEE-EEECcHHHHHhhCCC
Confidence 3467899999999999999998774 346899999999999999999765 11 1246899 9999986421 1245
Q ss_pred CccEEEecCcC
Q psy425 228 PYDVIHFGSGV 238 (254)
Q Consensus 228 ~fD~I~~~~~~ 238 (254)
+||+|++....
T Consensus 168 ~fD~Ii~d~~~ 178 (304)
T 2o07_A 168 AFDVIITDSSD 178 (304)
T ss_dssp CEEEEEEECC-
T ss_pred CceEEEECCCC
Confidence 79999997654
No 237
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.00 E-value=1.1e-09 Score=97.72 Aligned_cols=78 Identities=19% Similarity=0.157 Sum_probs=61.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC-CCCc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK-NGPY 229 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~-~~~f 229 (254)
..+|.+|||+|||+|.++..++..+ . .|+++|+|+.+++.|++|+..++ .. .+ +.++|+...... .+.|
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~g-a--~V~avDis~~al~~a~~n~~~ng-----~~-~~-~~~~D~~~~l~~~~~~f 281 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKG-A--YALAVDKDLEALGVLDQAALRLG-----LR-VD-IRHGEALPTLRGLEGPF 281 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHHT-----CC-CE-EEESCHHHHHHTCCCCE
T ss_pred hcCCCeEEEcccchhHHHHHHHHcC-C--eEEEEECCHHHHHHHHHHHHHhC-----CC-Cc-EEEccHHHHHHHhcCCC
Confidence 4569999999999999999999873 3 49999999999999999999874 22 46 778898743211 2349
Q ss_pred cEEEecCcC
Q psy425 230 DVIHFGSGV 238 (254)
Q Consensus 230 D~I~~~~~~ 238 (254)
|+|+++...
T Consensus 282 D~Ii~dpP~ 290 (393)
T 4dmg_A 282 HHVLLDPPT 290 (393)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCCc
Confidence 999998653
No 238
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.00 E-value=5.4e-10 Score=93.91 Aligned_cols=93 Identities=12% Similarity=0.034 Sum_probs=68.4
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++. ++ .. ...+|+++|+++++++.+++++.. .++++ ++++|+
T Consensus 10 ~~~iv~~~--~~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~-------~~~v~-~i~~D~ 76 (252)
T 1qyr_A 10 IDSIVSAI--NPQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFL-------GPKLT-IYQQDA 76 (252)
T ss_dssp HHHHHHHH--CCCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTT-------GGGEE-EECSCG
T ss_pred HHHHHHhc--CCCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhcc-------CCceE-EEECch
Confidence 77888888 78889999999999999999 65 33 423499999999999999988654 24799 999999
Q ss_pred CCCCcCC-----CCccEEEecCcCcCchHHHH
Q psy425 220 RKPYKKN-----GPYDVIHFGSGVKHIPIEVS 246 (254)
Q Consensus 220 ~~~~~~~-----~~fD~I~~~~~~~~~~~~l~ 246 (254)
....... +..|.|+++... +++.++.
T Consensus 77 ~~~~~~~~~~~~~~~~~vvsNlPY-~i~~~il 107 (252)
T 1qyr_A 77 MTFNFGELAEKMGQPLRVFGNLPY-NISTPLM 107 (252)
T ss_dssp GGCCHHHHHHHHTSCEEEEEECCT-TTHHHHH
T ss_pred hhCCHHHhhcccCCceEEEECCCC-CccHHHH
Confidence 7532211 124566766554 4544443
No 239
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.99 E-value=3.3e-10 Score=100.81 Aligned_cols=79 Identities=18% Similarity=0.202 Sum_probs=65.5
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC----
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK---- 225 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~---- 225 (254)
.+ ++.+|||+|||+|.++..++... . +|+|+|+++.+++.|++|+..++ ..+++ ++++|+......
T Consensus 207 ~~-~~~~VLDlg~G~G~~~~~la~~~-~--~v~~vD~s~~~~~~a~~n~~~n~-----~~~~~-~~~~d~~~~~~~~~~~ 276 (382)
T 1wxx_A 207 RF-RGERALDVFSYAGGFALHLALGF-R--EVVAVDSSAEALRRAEENARLNG-----LGNVR-VLEANAFDLLRRLEKE 276 (382)
T ss_dssp GC-CEEEEEEETCTTTHHHHHHHHHE-E--EEEEEESCHHHHHHHHHHHHHTT-----CTTEE-EEESCHHHHHHHHHHT
T ss_pred hc-CCCeEEEeeeccCHHHHHHHHhC-C--EEEEEECCHHHHHHHHHHHHHcC-----CCCce-EEECCHHHHHHHHHhc
Confidence 45 78899999999999999999883 3 79999999999999999999863 55699 999998753221
Q ss_pred CCCccEEEecCcC
Q psy425 226 NGPYDVIHFGSGV 238 (254)
Q Consensus 226 ~~~fD~I~~~~~~ 238 (254)
..+||+|+++...
T Consensus 277 ~~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 277 GERFDLVVLDPPA 289 (382)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCeeEEEECCCC
Confidence 4579999997543
No 240
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.95 E-value=1.8e-09 Score=93.90 Aligned_cols=84 Identities=21% Similarity=0.135 Sum_probs=63.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-cCCCCc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-KKNGPY 229 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-~~~~~f 229 (254)
...+.+|||||||+|.++..+++.. +..+|+++|+++++++.|++++.... ..+..++++ ++.+|+.... ...++|
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~-~~~~~~~v~-~~~~D~~~~l~~~~~~f 190 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNIS-CGYEDKRVN-VFIEDASKFLENVTNTY 190 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTS-GGGGSTTEE-EEESCHHHHHHHCCSCE
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhc-cccCCCcEE-EEEccHHHHHhhcCCCc
Confidence 3467899999999999999998763 34589999999999999999976510 001246899 9999986422 124569
Q ss_pred cEEEecCc
Q psy425 230 DVIHFGSG 237 (254)
Q Consensus 230 D~I~~~~~ 237 (254)
|+|+++..
T Consensus 191 DvIi~d~~ 198 (321)
T 2pt6_A 191 DVIIVDSS 198 (321)
T ss_dssp EEEEEECC
T ss_pred eEEEECCc
Confidence 99998763
No 241
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.95 E-value=1.7e-09 Score=92.35 Aligned_cols=85 Identities=21% Similarity=0.136 Sum_probs=64.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-CCCCc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-KNGPY 229 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-~~~~f 229 (254)
..++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...+.. +..++++ ++.+|+..... ..++|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~-~~~~D~~~~l~~~~~~f 152 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCG-YEDKRVN-VFIEDASKFLENVTNTY 152 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGG-GGSTTEE-EEESCHHHHHHHCCSCE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccc-cCCCcEE-EEECChHHHHHhCCCCc
Confidence 3467899999999999999998763 3468999999999999999997652100 1246899 99999874221 24569
Q ss_pred cEEEecCcC
Q psy425 230 DVIHFGSGV 238 (254)
Q Consensus 230 D~I~~~~~~ 238 (254)
|+|++....
T Consensus 153 D~Ii~d~~~ 161 (283)
T 2i7c_A 153 DVIIVDSSD 161 (283)
T ss_dssp EEEEEECCC
T ss_pred eEEEEcCCC
Confidence 999997643
No 242
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.95 E-value=1.5e-09 Score=90.95 Aligned_cols=89 Identities=11% Similarity=0.064 Sum_probs=67.1
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||||||+|.++..+++.. ..+|+|+|+++.+++.++++ . ..+++ ++++|+
T Consensus 20 ~~~iv~~~--~~~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~--~-------~~~v~-~i~~D~ 85 (249)
T 3ftd_A 20 LKKIAEEL--NIEEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI--G-------DERLE-VINEDA 85 (249)
T ss_dssp HHHHHHHT--TCCTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS--C-------CTTEE-EECSCT
T ss_pred HHHHHHhc--CCCCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc--c-------CCCeE-EEEcch
Confidence 67778887 77889999999999999999998773 24799999999999999887 2 24799 999999
Q ss_pred CCCCcCC--CCccEEEecCcCcCchHH
Q psy425 220 RKPYKKN--GPYDVIHFGSGVKHIPIE 244 (254)
Q Consensus 220 ~~~~~~~--~~fD~I~~~~~~~~~~~~ 244 (254)
.....+. ..| .|+++... ++..+
T Consensus 86 ~~~~~~~~~~~~-~vv~NlPy-~i~~~ 110 (249)
T 3ftd_A 86 SKFPFCSLGKEL-KVVGNLPY-NVASL 110 (249)
T ss_dssp TTCCGGGSCSSE-EEEEECCT-TTHHH
T ss_pred hhCChhHccCCc-EEEEECch-hccHH
Confidence 8543322 123 55555544 44443
No 243
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.93 E-value=1.5e-09 Score=96.96 Aligned_cols=79 Identities=11% Similarity=0.024 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh--CCCcccCCCeeEEEEcCCCCCCcC--C
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKIS--YPKLYKLYKIMDVVEWDARKPYKK--N 226 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~~~~v~~~~~~d~~~~~~~--~ 226 (254)
+.+|.+|||+|||+|..+..+++.+ .+|+++|+++.+++.|++|+..+ + ..+++ ++++|+...... .
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~g-----l~~i~-~i~~Da~~~L~~~~~ 161 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNE-----GKDVN-ILTGDFKEYLPLIKT 161 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCT-----TCEEE-EEESCGGGSHHHHHH
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccC-----CCcEE-EEECcHHHhhhhccC
Confidence 4458999999999999999998774 37999999999999999999875 3 36899 999999864222 2
Q ss_pred CCccEEEecCcC
Q psy425 227 GPYDVIHFGSGV 238 (254)
Q Consensus 227 ~~fD~I~~~~~~ 238 (254)
++||+|+++...
T Consensus 162 ~~fDvV~lDPPr 173 (410)
T 3ll7_A 162 FHPDYIYVDPAR 173 (410)
T ss_dssp HCCSEEEECCEE
T ss_pred CCceEEEECCCC
Confidence 469999997543
No 244
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.93 E-value=2.8e-09 Score=101.74 Aligned_cols=80 Identities=15% Similarity=0.090 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-cCCCCcc
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-KKNGPYD 230 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-~~~~~fD 230 (254)
.+|.+|||+|||+|.+++.++.... .+|+++|+|+.+++.|++|+..++ +...+++ ++++|+.... ...++||
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ng---l~~~~v~-~i~~D~~~~l~~~~~~fD 611 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNG---LTGRAHR-LIQADCLAWLREANEQFD 611 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTT---CCSTTEE-EEESCHHHHHHHCCCCEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcC---CCccceE-EEecCHHHHHHhcCCCcc
Confidence 4789999999999999999887543 379999999999999999999874 1124799 9999987522 2245799
Q ss_pred EEEecCc
Q psy425 231 VIHFGSG 237 (254)
Q Consensus 231 ~I~~~~~ 237 (254)
+|+++..
T Consensus 612 ~Ii~DPP 618 (703)
T 3v97_A 612 LIFIDPP 618 (703)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9999764
No 245
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.93 E-value=5.9e-09 Score=91.69 Aligned_cols=85 Identities=16% Similarity=0.067 Sum_probs=70.2
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
...+..+|+|||||+|..+..+++.. ++.+++..|. |++++.|++++... ..++|+ ++.+|+.....+ .+
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~-----~~~rv~-~~~gD~~~~~~~--~~ 245 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQ-----EEEQID-FQEGDFFKDPLP--EA 245 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC-------CCSEE-EEESCTTTSCCC--CC
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhc-----ccCcee-eecCccccCCCC--Cc
Confidence 45567899999999999999999997 6678999997 89999999887653 467899 999999754332 37
Q ss_pred cEEEecCcCcCchHH
Q psy425 230 DVIHFGSGVKHIPIE 244 (254)
Q Consensus 230 D~I~~~~~~~~~~~~ 244 (254)
|+|++..++++.+++
T Consensus 246 D~~~~~~vlh~~~d~ 260 (353)
T 4a6d_A 246 DLYILARVLHDWADG 260 (353)
T ss_dssp SEEEEESSGGGSCHH
T ss_pred eEEEeeeecccCCHH
Confidence 999999999998875
No 246
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.93 E-value=1.7e-09 Score=95.95 Aligned_cols=88 Identities=17% Similarity=0.191 Sum_probs=64.4
Q ss_pred CCCCCEEEEEcCC------CChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc
Q psy425 151 LLPGANVLDLGFG------SGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK 224 (254)
Q Consensus 151 ~~~~~~VLDiG~G------~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~ 224 (254)
..++.+||||||| +|..+..+++...+.++|+|+|+++.|. . ...+++ |+++|+.+...
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~------~~~rI~-fv~GDa~dlpf 278 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V------DELRIR-TIQGDQNDAEF 278 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G------CBTTEE-EEECCTTCHHH
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h------cCCCcE-EEEecccccch
Confidence 3467899999999 7888887777655677999999999972 1 245899 99999986433
Q ss_pred C------CCCccEEEecCcCcCc---hHHHHHHHHhhcC
Q psy425 225 K------NGPYDVIHFGSGVKHI---PIEVSKLCRSQKK 254 (254)
Q Consensus 225 ~------~~~fD~I~~~~~~~~~---~~~l~~~lr~lk~ 254 (254)
. .++||+|++.+. ++. ...+.+..+.|||
T Consensus 279 ~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKP 316 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRP 316 (419)
T ss_dssp HHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEE
T ss_pred hhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCC
Confidence 3 467999999765 333 3346666666664
No 247
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.92 E-value=1.9e-09 Score=93.38 Aligned_cols=84 Identities=18% Similarity=0.042 Sum_probs=64.4
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-cCCCCc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-KKNGPY 229 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-~~~~~f 229 (254)
...+.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++..... .+..++++ ++.+|+.... ...++|
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~-~~~~~rv~-~~~~D~~~~l~~~~~~f 182 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSC-GFSHPKLD-LFCGDGFEFLKNHKNEF 182 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSG-GGGCTTEE-EECSCHHHHHHHCTTCE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhcc-ccCCCCEE-EEEChHHHHHHhcCCCc
Confidence 3456899999999999999998764 446899999999999999999865200 01246899 9999986422 134579
Q ss_pred cEEEecCc
Q psy425 230 DVIHFGSG 237 (254)
Q Consensus 230 D~I~~~~~ 237 (254)
|+|+++..
T Consensus 183 D~Ii~d~~ 190 (314)
T 2b2c_A 183 DVIITDSS 190 (314)
T ss_dssp EEEEECCC
T ss_pred eEEEEcCC
Confidence 99999764
No 248
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.91 E-value=7e-09 Score=90.82 Aligned_cols=83 Identities=19% Similarity=0.161 Sum_probs=67.2
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCC----CEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDK----GHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKN 226 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~ 226 (254)
..++.+|||+|||+|.++..+++..... .+++|+|+++.+++.|+.++..++ . ++. +.++|...... .
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-----~-~~~-i~~~D~l~~~~-~ 199 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-----Q-KMT-LLHQDGLANLL-V 199 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-----C-CCE-EEESCTTSCCC-C
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-----C-Cce-EEECCCCCccc-c
Confidence 3467899999999999999998886432 589999999999999999988753 3 688 99999876443 4
Q ss_pred CCccEEEecCcCcCc
Q psy425 227 GPYDVIHFGSGVKHI 241 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~ 241 (254)
.+||+|+++..+..+
T Consensus 200 ~~fD~Ii~NPPfg~~ 214 (344)
T 2f8l_A 200 DPVDVVISDLPVGYY 214 (344)
T ss_dssp CCEEEEEEECCCSEE
T ss_pred CCccEEEECCCCCCc
Confidence 569999999876443
No 249
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.90 E-value=2.4e-10 Score=95.47 Aligned_cols=86 Identities=21% Similarity=0.273 Sum_probs=68.9
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++.+|||+|||+|.++..+++.+ .+|+|+|+++++++.|++++.. ..+++ ++++|+
T Consensus 18 ~~~i~~~~--~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~-------~~~v~-~~~~D~ 84 (245)
T 1yub_A 18 LNQIIKQL--NLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKL-------NTRVT-LIHQDI 84 (245)
T ss_dssp HHHHHHHC--CCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTT-------CSEEE-ECCSCC
T ss_pred HHHHHHhc--CCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhcc-------CCceE-EEECCh
Confidence 67778887 77889999999999999999999885 3799999999999998887642 35799 999999
Q ss_pred CCCCcC-CCCccEEEecCcCc
Q psy425 220 RKPYKK-NGPYDVIHFGSGVK 239 (254)
Q Consensus 220 ~~~~~~-~~~fD~I~~~~~~~ 239 (254)
...... .++| .|+++..+.
T Consensus 85 ~~~~~~~~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIPYH 104 (245)
T ss_dssp TTTTCCCSSEE-EEEEECCSS
T ss_pred hhcCcccCCCc-EEEEeCCcc
Confidence 864333 3568 677765543
No 250
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.90 E-value=5.4e-09 Score=83.51 Aligned_cols=73 Identities=27% Similarity=0.265 Sum_probs=55.7
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCC--------CEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEE-EcCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDK--------GHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVV-EWDAR 220 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~--------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~-~~d~~ 220 (254)
.+.++.+|||+|||+|.++..+++..+.. ++|+|+|+++.+ ...+++ +. .+|+.
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------------~~~~~~-~~~~~d~~ 81 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------------PLEGAT-FLCPADVT 81 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------------CCTTCE-EECSCCTT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------------cCCCCe-EEEeccCC
Confidence 46789999999999999999999997543 689999999831 134688 88 88876
Q ss_pred CCC--------cCCCCccEEEecCcCc
Q psy425 221 KPY--------KKNGPYDVIHFGSGVK 239 (254)
Q Consensus 221 ~~~--------~~~~~fD~I~~~~~~~ 239 (254)
... ...++||+|+++.+++
T Consensus 82 ~~~~~~~~~~~~~~~~fD~V~~~~~~~ 108 (196)
T 2nyu_A 82 DPRTSQRILEVLPGRRADVILSDMAPN 108 (196)
T ss_dssp SHHHHHHHHHHSGGGCEEEEEECCCCC
T ss_pred CHHHHHHHHHhcCCCCCcEEEeCCCCC
Confidence 432 1234699999976543
No 251
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.89 E-value=4.6e-09 Score=84.48 Aligned_cols=68 Identities=12% Similarity=0.138 Sum_probs=53.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
+.++.+|||+|||+|.++..+++. .++|+|+|+++.. ...+++ ++++|+.....
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~----------------~~~~v~-~~~~D~~~~~~~~~~~~ 82 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME----------------EIAGVR-FIRCDIFKETIFDDIDR 82 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC----------------CCTTCE-EEECCTTSSSHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc----------------cCCCeE-EEEccccCHHHHHHHHH
Confidence 578999999999999999999887 3589999999741 235799 99999986431
Q ss_pred --C---CCCccEEEecCcC
Q psy425 225 --K---NGPYDVIHFGSGV 238 (254)
Q Consensus 225 --~---~~~fD~I~~~~~~ 238 (254)
. .++||+|+++...
T Consensus 83 ~~~~~~~~~~D~Vlsd~~~ 101 (191)
T 3dou_A 83 ALREEGIEKVDDVVSDAMA 101 (191)
T ss_dssp HHHHHTCSSEEEEEECCCC
T ss_pred HhhcccCCcceEEecCCCc
Confidence 1 0379999998754
No 252
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.89 E-value=1.8e-09 Score=89.61 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=65.6
Q ss_pred HHHHHHHhhhcCC-CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEE-c
Q psy425 140 QAACLQHLSDKLL-PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVE-W 217 (254)
Q Consensus 140 ~~~~l~~l~~~~~-~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~-~ 217 (254)
...+++.+ .+. ++.+|||||||+|.++..+++... .+|+|+|++++|++.|+++..... .....++. +.. .
T Consensus 25 L~~~L~~~--~~~~~g~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~~~~~--~~~~~~~~-~~~~~ 97 (232)
T 3opn_A 25 LEKALKEF--HLEINGKTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSDERVV--VMEQFNFR-NAVLA 97 (232)
T ss_dssp HHHHHHHT--TCCCTTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTCTTEE--EECSCCGG-GCCGG
T ss_pred HHHHHHHc--CCCCCCCEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhCcccc--ccccceEE-EeCHh
Confidence 34455555 333 567999999999999999998842 379999999999999877543210 00011233 222 2
Q ss_pred CCCCCCcCCCCccEEEecCcCcCchHHHHHHHHhhcC
Q psy425 218 DARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254 (254)
Q Consensus 218 d~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk~ 254 (254)
|+.. ..||.+.+..++.++...+.+..+.|||
T Consensus 98 ~~~~-----~~~d~~~~D~v~~~l~~~l~~i~rvLkp 129 (232)
T 3opn_A 98 DFEQ-----GRPSFTSIDVSFISLDLILPPLYEILEK 129 (232)
T ss_dssp GCCS-----CCCSEEEECCSSSCGGGTHHHHHHHSCT
T ss_pred HcCc-----CCCCEEEEEEEhhhHHHHHHHHHHhccC
Confidence 2211 1256666666666667777778888875
No 253
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.89 E-value=3.5e-09 Score=93.68 Aligned_cols=77 Identities=19% Similarity=0.036 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
+.++.+|||||||+|..+..+++.+ +..+++++|+ +.+++.|++ ..+++ ++.+|+....+ . ||
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~-----------~~~v~-~~~~d~~~~~~--~-~D 269 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP-----------LSGIE-HVGGDMFASVP--Q-GD 269 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEE-EEECCTTTCCC--C-EE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh-----------cCCCE-EEeCCcccCCC--C-CC
Confidence 5567899999999999999999986 5568999999 999876653 13699 99999987332 2 99
Q ss_pred EEEecCcCcCchHH
Q psy425 231 VIHFGSGVKHIPIE 244 (254)
Q Consensus 231 ~I~~~~~~~~~~~~ 244 (254)
+|++..+++++++.
T Consensus 270 ~v~~~~~lh~~~d~ 283 (372)
T 1fp1_D 270 AMILKAVCHNWSDE 283 (372)
T ss_dssp EEEEESSGGGSCHH
T ss_pred EEEEecccccCCHH
Confidence 99999999988754
No 254
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.88 E-value=4.2e-09 Score=93.16 Aligned_cols=87 Identities=14% Similarity=0.104 Sum_probs=68.0
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
+.+..+|||||||+|..+..+++.. +..+++++|+ +.+++.|++ ..+++ ++.+|+..+.+ .+ |
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~-~~~~d~~~~~p-~~--D 263 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA-----------FSGVE-HLGGDMFDGVP-KG--D 263 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEE-EEECCTTTCCC-CC--S
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh-----------cCCCE-EEecCCCCCCC-CC--C
Confidence 4567899999999999999999987 5678999999 888876543 24799 99999987443 33 9
Q ss_pred EEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 231 VIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 231 ~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
+|++..++++.++. +.+..+.|||
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~p 292 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAALPD 292 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHHSCT
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCC
Confidence 99999999988764 3444455553
No 255
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.87 E-value=2.1e-08 Score=81.21 Aligned_cols=91 Identities=16% Similarity=0.064 Sum_probs=68.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCccc--CCCeeEEEEcCCCCC-------
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYK--LYKIMDVVEWDARKP------- 222 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~--~~~v~~~~~~d~~~~------- 222 (254)
.+..+|||+|| |+.|+++|+.. .++|+++|.+++..+.|++++++++ . .++|+ ++.+|+.+.
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~~--~g~VvtvE~d~~~~~~ar~~l~~~g----~~~~~~I~-~~~gda~~~~~wg~p~ 99 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAELP--GKHVTSVESDRAWARMMKAWLAANP----PAEGTEVN-IVWTDIGPTGDWGHPV 99 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTST--TCEEEEEESCHHHHHHHHHHHHHSC----CCTTCEEE-EEECCCSSBCGGGCBS
T ss_pred hCCCEEEEECc--hHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHcC----CCCCCceE-EEEeCchhhhcccccc
Confidence 46789999998 58889998752 5689999999999999999999864 3 56899 999997542
Q ss_pred -------C----------cCCCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 223 -------Y----------KKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 223 -------~----------~~~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
+ ...++||+|++.+... ...+...++.|+
T Consensus 100 ~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~ 145 (202)
T 3cvo_A 100 SDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR--VGCALATAFSIT 145 (202)
T ss_dssp SSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCS
T ss_pred cchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcC
Confidence 1 1236799999998654 233444555554
No 256
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.87 E-value=3.1e-09 Score=93.27 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=63.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
+.++.+|||||||+|..+..+++.. +..+++++|+ +.+++.|++ ..+++ ++.+|+....+ .||
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~-~~~~d~~~~~p---~~D 248 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG-----------SNNLT-YVGGDMFTSIP---NAD 248 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------BTTEE-EEECCTTTCCC---CCS
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc-----------CCCcE-EEeccccCCCC---Ccc
Confidence 4567899999999999999999986 5568999999 999887654 13599 99999976333 299
Q ss_pred EEEecCcCcCchHH
Q psy425 231 VIHFGSGVKHIPIE 244 (254)
Q Consensus 231 ~I~~~~~~~~~~~~ 244 (254)
+|++..+++++++.
T Consensus 249 ~v~~~~~lh~~~d~ 262 (352)
T 1fp2_A 249 AVLLKYILHNWTDK 262 (352)
T ss_dssp EEEEESCGGGSCHH
T ss_pred EEEeehhhccCCHH
Confidence 99999999988753
No 257
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.87 E-value=2e-09 Score=90.88 Aligned_cols=92 Identities=12% Similarity=-0.021 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccE
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDV 231 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~ 231 (254)
..+.+|||||||+|..+..+++. + .+|+++|+++++++.|++++.... .....++++ ++.+|+.... ++||+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~-~~~~~~rv~-~~~~D~~~~~---~~fD~ 142 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFH-EVKNNKNFT-HAKQLLDLDI---KKYDL 142 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHH-HHHTCTTEE-EESSGGGSCC---CCEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhc-cccCCCeEE-EEechHHHHH---hhCCE
Confidence 35689999999999999988877 4 589999999999999998764310 001245899 9999997644 56999
Q ss_pred EEecCcCcCchHHHHHHHHhhc
Q psy425 232 IHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 232 I~~~~~~~~~~~~l~~~lr~lk 253 (254)
|++... .....+.+..+.||
T Consensus 143 Ii~d~~--dp~~~~~~~~~~L~ 162 (262)
T 2cmg_A 143 IFCLQE--PDIHRIDGLKRMLK 162 (262)
T ss_dssp EEESSC--CCHHHHHHHHTTEE
T ss_pred EEECCC--ChHHHHHHHHHhcC
Confidence 999853 21223444455554
No 258
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.87 E-value=3.6e-09 Score=89.08 Aligned_cols=96 Identities=15% Similarity=0.160 Sum_probs=69.1
Q ss_pred HHHHHHHhhhcCCCC--CEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhC--CCccc-C-CCeeE
Q psy425 140 QAACLQHLSDKLLPG--ANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISY--PKLYK-L-YKIMD 213 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~--~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~-~-~~v~~ 213 (254)
...+.+.+ .+.++ .+|||+|||+|..++.++..++ +|+++|.++.+++.++++++... ....+ . .+++
T Consensus 75 ~e~l~~al--~l~~g~~~~VLDl~~G~G~dal~lA~~g~---~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~- 148 (258)
T 2oyr_A 75 GEAVAKAV--GIKGDYLPDVVDATAGLGRDAFVLASVGC---RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQ- 148 (258)
T ss_dssp GSHHHHHT--TCBTTBCCCEEETTCTTCHHHHHHHHHTC---CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEE-
T ss_pred HHHHHHHh--cccCCCCCEEEEcCCcCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEE-
Confidence 34445555 56677 8999999999999999999853 59999999998888877765321 00001 1 4799
Q ss_pred EEEcCCCCCCc-CCCCccEEEecCcCcCc
Q psy425 214 VVEWDARKPYK-KNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 214 ~~~~d~~~~~~-~~~~fD~I~~~~~~~~~ 241 (254)
++++|+..... ...+||+|+++..+++-
T Consensus 149 ~~~~D~~~~L~~~~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 149 LIHASSLTALTDITPRPQVVYLDPMFPHK 177 (258)
T ss_dssp EEESCHHHHSTTCSSCCSEEEECCCCCCC
T ss_pred EEECCHHHHHHhCcccCCEEEEcCCCCCc
Confidence 99999874222 12359999999888653
No 259
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.86 E-value=5.9e-10 Score=94.38 Aligned_cols=77 Identities=25% Similarity=0.113 Sum_probs=54.4
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEE--EcCCCCCCcCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVV--EWDARKPYKKNG 227 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~--~~d~~~~~~~~~ 227 (254)
.+.++.+|||+|||+|.++..+++. + +|+|+|+++ ++..++++..... ....++. ++ ++|+.... .+
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~-~---~V~gvD~s~-m~~~a~~~~~~~~---~~~~~v~-~~~~~~D~~~l~--~~ 139 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR-P---HVMDVRAYT-LGVGGHEVPRITE---SYGWNIV-KFKSRVDIHTLP--VE 139 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS-T---TEEEEEEEC-CCCSSCCCCCCCC---BTTGGGE-EEECSCCTTTSC--CC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc-C---cEEEEECch-hhhhhhhhhhhhh---ccCCCeE-EEecccCHhHCC--CC
Confidence 5678999999999999999999877 3 599999998 5332221100000 0011688 99 89998633 45
Q ss_pred CccEEEecCc
Q psy425 228 PYDVIHFGSG 237 (254)
Q Consensus 228 ~fD~I~~~~~ 237 (254)
+||+|++..+
T Consensus 140 ~fD~V~sd~~ 149 (265)
T 2oxt_A 140 RTDVIMCDVG 149 (265)
T ss_dssp CCSEEEECCC
T ss_pred CCcEEEEeCc
Confidence 7999999876
No 260
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.86 E-value=7.6e-09 Score=91.37 Aligned_cols=87 Identities=16% Similarity=0.093 Sum_probs=67.8
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
..+..+|||||||+|..+..+++.. +..+++++|+ +++++.|++ .++++ ++.+|+..+.+ .+ |
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~-~~~~D~~~~~p-~~--D 261 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ-----------FPGVT-HVGGDMFKEVP-SG--D 261 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEE-EEECCTTTCCC-CC--S
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh-----------cCCeE-EEeCCcCCCCC-CC--C
Confidence 5577899999999999999999986 5678999999 888776543 24799 99999987443 33 9
Q ss_pred EEEecCcCcCchHH-----HHHHHHhhcC
Q psy425 231 VIHFGSGVKHIPIE-----VSKLCRSQKK 254 (254)
Q Consensus 231 ~I~~~~~~~~~~~~-----l~~~lr~lk~ 254 (254)
+|++..++++.+++ +.+..+.|||
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~p 290 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPA 290 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCT
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCC
Confidence 99999999988653 3344455553
No 261
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.85 E-value=5.6e-10 Score=95.04 Aligned_cols=77 Identities=21% Similarity=0.127 Sum_probs=54.6
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEE--EcCCCCCCcCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVV--EWDARKPYKKNG 227 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~--~~d~~~~~~~~~ 227 (254)
.+.++.+|||+|||+|.++..+++. + +|+|+|+++ ++..++++..... ....+++ ++ ++|+.... .+
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~-~---~V~gVD~s~-m~~~a~~~~~~~~---~~~~~v~-~~~~~~D~~~l~--~~ 147 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ-P---NVREVKAYT-LGTSGHEKPRLVE---TFGWNLI-TFKSKVDVTKME--PF 147 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS-T---TEEEEEEEC-CCCTTSCCCCCCC---CTTGGGE-EEECSCCGGGCC--CC
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc-C---CEEEEECch-hhhhhhhchhhhh---hcCCCeE-EEeccCcHhhCC--CC
Confidence 4568899999999999999999887 3 599999998 5433322110000 0012688 99 89987632 45
Q ss_pred CccEEEecCc
Q psy425 228 PYDVIHFGSG 237 (254)
Q Consensus 228 ~fD~I~~~~~ 237 (254)
+||+|++..+
T Consensus 148 ~fD~Vvsd~~ 157 (276)
T 2wa2_A 148 QADTVLCDIG 157 (276)
T ss_dssp CCSEEEECCC
T ss_pred CcCEEEECCC
Confidence 7999999876
No 262
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.83 E-value=4.9e-09 Score=93.32 Aligned_cols=95 Identities=13% Similarity=0.017 Sum_probs=70.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCC--eeEEEEcCCCCCCc--CCC
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYK--IMDVVEWDARKPYK--KNG 227 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~--v~~~~~~d~~~~~~--~~~ 227 (254)
.++.+|||++||+|.+++.++...+.-.+|+++|+++.+++.+++|++.++ ..+ ++ ++++|+..... ...
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng-----l~~~~v~-v~~~Da~~~l~~~~~~ 124 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN-----IPEDRYE-IHGMEANFFLRKEWGF 124 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT-----CCGGGEE-EECSCHHHHHHSCCSS
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC-----CCCceEE-EEeCCHHHHHHHhhCC
Confidence 468999999999999999999874211479999999999999999999974 434 99 99999864322 134
Q ss_pred CccEEEecCcCcCchHHHHHHHHhhc
Q psy425 228 PYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 228 ~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
.||+|+++. +....+.+...++.+|
T Consensus 125 ~fD~V~lDP-~g~~~~~l~~a~~~Lk 149 (392)
T 3axs_A 125 GFDYVDLDP-FGTPVPFIESVALSMK 149 (392)
T ss_dssp CEEEEEECC-SSCCHHHHHHHHHHEE
T ss_pred CCcEEEECC-CcCHHHHHHHHHHHhC
Confidence 699999987 3222233444455444
No 263
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.83 E-value=6.9e-09 Score=92.09 Aligned_cols=98 Identities=16% Similarity=0.076 Sum_probs=70.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCC----------cccCCCeeEEEEcCCCCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPK----------LYKLYKIMDVVEWDARKP 222 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~----------~~~~~~v~~~~~~d~~~~ 222 (254)
++.+|||+|||+|..++.++...+ ..+|+++|+++++++.+++|++.++.. ..+..+++ +.++|+...
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~-v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIV-INHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEE-EEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceE-EEcCcHHHH
Confidence 789999999999999999999853 347999999999999999999986100 00133488 999998643
Q ss_pred CcC-CCCccEEEecCcCcCchHHHHHHHHhhc
Q psy425 223 YKK-NGPYDVIHFGSGVKHIPIEVSKLCRSQK 253 (254)
Q Consensus 223 ~~~-~~~fD~I~~~~~~~~~~~~l~~~lr~lk 253 (254)
... ...||+|++.. +....+.+..+++.+|
T Consensus 125 ~~~~~~~fD~I~lDP-~~~~~~~l~~a~~~lk 155 (378)
T 2dul_A 125 MAERHRYFHFIDLDP-FGSPMEFLDTALRSAK 155 (378)
T ss_dssp HHHSTTCEEEEEECC-SSCCHHHHHHHHHHEE
T ss_pred HHhccCCCCEEEeCC-CCCHHHHHHHHHHhcC
Confidence 221 34699999765 3222343444556554
No 264
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.81 E-value=3.8e-08 Score=89.16 Aligned_cols=91 Identities=18% Similarity=0.126 Sum_probs=71.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcC------------CCCEEEEEeCCHHHHHHHHHHHHhhCCCccc
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVG------------DKGHVTAVDHIPQLINLFMTKLKISYPKLYK 207 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~ 207 (254)
...+++.+ ...++.+|||.|||+|.++..+++... ....++|+|+++.+++.|+.|+..++
T Consensus 160 ~~~mv~~l--~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g----- 232 (445)
T 2okc_A 160 IQAMVDCI--NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG----- 232 (445)
T ss_dssp HHHHHHHH--CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT-----
T ss_pred HHHHHHHh--CCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC-----
Confidence 55666666 566788999999999999998887641 11359999999999999999988753
Q ss_pred CC--CeeEEEEcCCCCCCcCCCCccEEEecCcCc
Q psy425 208 LY--KIMDVVEWDARKPYKKNGPYDVIHFGSGVK 239 (254)
Q Consensus 208 ~~--~v~~~~~~d~~~~~~~~~~fD~I~~~~~~~ 239 (254)
.. ++. +.++|....... .+||+|+++..+.
T Consensus 233 ~~~~~~~-i~~gD~l~~~~~-~~fD~Iv~NPPf~ 264 (445)
T 2okc_A 233 IGTDRSP-IVCEDSLEKEPS-TLVDVILANPPFG 264 (445)
T ss_dssp CCSSCCS-EEECCTTTSCCS-SCEEEEEECCCSS
T ss_pred CCcCCCC-EeeCCCCCCccc-CCcCEEEECCCCC
Confidence 32 688 999998754333 3699999998774
No 265
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.79 E-value=1.1e-08 Score=83.18 Aligned_cols=86 Identities=17% Similarity=0.106 Sum_probs=61.6
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+. ...++.+|||+|||+|.++..++ .+|+|+|+++. +++ +..+|+
T Consensus 55 ~~~~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~--------------------~~~-~~~~d~ 106 (215)
T 2zfu_A 55 VDRIARDLR-QRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL--------------------DPR-VTVCDM 106 (215)
T ss_dssp HHHHHHHHH-TSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS--------------------STT-EEESCT
T ss_pred HHHHHHHHh-ccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC--------------------Cce-EEEecc
Confidence 344566653 45678999999999999987763 36999999977 245 888998
Q ss_pred CCCCcCCCCccEEEecCcCcC--chHHHHHHHHhhc
Q psy425 220 RKPYKKNGPYDVIHFGSGVKH--IPIEVSKLCRSQK 253 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~~~--~~~~l~~~lr~lk 253 (254)
.......++||+|++..++++ ....+.+..+.||
T Consensus 107 ~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~ 142 (215)
T 2zfu_A 107 AQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLK 142 (215)
T ss_dssp TSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEE
T ss_pred ccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCC
Confidence 764445567999999999863 2233445555554
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.75 E-value=6.1e-08 Score=92.55 Aligned_cols=92 Identities=21% Similarity=0.160 Sum_probs=72.0
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcC-----------------------------------------CC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVG-----------------------------------------DK 178 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~-----------------------------------------~~ 178 (254)
.+.++... ...++..|||.+||||.+++.++.... +.
T Consensus 179 Aa~ll~~~--~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 179 AAAIVMRS--GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHT--TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhh--CCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 55555555 667889999999999999999887641 12
Q ss_pred CEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC--CCCccEEEecCcC
Q psy425 179 GHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK--NGPYDVIHFGSGV 238 (254)
Q Consensus 179 ~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~--~~~fD~I~~~~~~ 238 (254)
.+++|+|+++.+++.|++|+..+| ....++ |.++|+.....+ .++||+|++|..+
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~ag----v~~~i~-~~~~D~~~~~~~~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAG----IGELIT-FEVKDVAQLTNPLPKGPYGTVLSNPPY 313 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTT----CGGGEE-EEECCGGGCCCSCTTCCCCEEEECCCC
T ss_pred ccEEEEECCHHHHHHHHHHHHHcC----CCCceE-EEECChhhCccccccCCCCEEEeCCCc
Confidence 479999999999999999999875 334589 999999854322 2369999999765
No 267
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.74 E-value=1.4e-08 Score=90.90 Aligned_cols=81 Identities=14% Similarity=0.011 Sum_probs=63.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ ...++.+|||+|||+|.++..+++..+...+++|+|+++.+++.| .+++ +.++|+
T Consensus 28 ~~~~~~~~--~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------~~~~-~~~~D~ 90 (421)
T 2ih2_A 28 VDFMVSLA--EAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------PWAE-GILADF 90 (421)
T ss_dssp HHHHHHHC--CCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------TTEE-EEESCG
T ss_pred HHHHHHhh--ccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------CCCc-EEeCCh
Confidence 55666666 445677999999999999999998864446899999999998766 2688 999999
Q ss_pred CCCCcCCCCccEEEecCcC
Q psy425 220 RKPYKKNGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~~~~~~fD~I~~~~~~ 238 (254)
.... ..++||+|+++..+
T Consensus 91 ~~~~-~~~~fD~Ii~NPPy 108 (421)
T 2ih2_A 91 LLWE-PGEAFDLILGNPPY 108 (421)
T ss_dssp GGCC-CSSCEEEEEECCCC
T ss_pred hhcC-ccCCCCEEEECcCc
Confidence 7643 33569999998655
No 268
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.72 E-value=1.8e-08 Score=88.51 Aligned_cols=77 Identities=17% Similarity=0.141 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
+.++.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++ ..+++ ++.+|+....+ .||
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~-~~~~d~~~~~~---~~D 253 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG-----------NENLN-FVGGDMFKSIP---SAD 253 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC-----------CSSEE-EEECCTTTCCC---CCS
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc-----------CCCcE-EEeCccCCCCC---Cce
Confidence 3467899999999999999999986 5568999999 788866543 13599 99999987332 399
Q ss_pred EEEecCcCcCchHH
Q psy425 231 VIHFGSGVKHIPIE 244 (254)
Q Consensus 231 ~I~~~~~~~~~~~~ 244 (254)
+|++..+++++++.
T Consensus 254 ~v~~~~vlh~~~d~ 267 (358)
T 1zg3_A 254 AVLLKWVLHDWNDE 267 (358)
T ss_dssp EEEEESCGGGSCHH
T ss_pred EEEEcccccCCCHH
Confidence 99999999988763
No 269
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.69 E-value=8.2e-09 Score=81.30 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=61.9
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc---CC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK---KN 226 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~---~~ 226 (254)
.+++|.+|||+|||. +++|++++|++.|+++... +++ +.++|+..... ..
T Consensus 9 g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~---------~~~-~~~~d~~~~~~~~~~~ 61 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN---------EGR-VSVENIKQLLQSAHKE 61 (176)
T ss_dssp TCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT---------TSE-EEEEEGGGGGGGCCCS
T ss_pred CCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc---------CcE-EEEechhcCccccCCC
Confidence 578999999999985 2399999999999988532 588 99999986444 46
Q ss_pred CCccEEEecCcCcCc----hHHHHHHHHhhcC
Q psy425 227 GPYDVIHFGSGVKHI----PIEVSKLCRSQKK 254 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~----~~~l~~~lr~lk~ 254 (254)
++||+|+++.+++++ ...+.+..|.|||
T Consensus 62 ~~fD~V~~~~~l~~~~~~~~~~l~~~~r~Lkp 93 (176)
T 2ld4_A 62 SSFDIILSGLVPGSTTLHSAEILAEIARILRP 93 (176)
T ss_dssp SCEEEEEECCSTTCCCCCCHHHHHHHHHHEEE
T ss_pred CCEeEEEECChhhhcccCHHHHHHHHHHHCCC
Confidence 679999999999877 4456666777764
No 270
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.67 E-value=1.2e-07 Score=72.10 Aligned_cols=90 Identities=14% Similarity=0.064 Sum_probs=67.2
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCC-hHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSG-FMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G-~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d 218 (254)
...+.+.+.+...++.+|||||||+| ..+..|++..+- .|+++|+++.++ . ++..|
T Consensus 22 ~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av--------------------~-~v~dD 78 (153)
T 2k4m_A 22 WNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHG--------------------G-IVRDD 78 (153)
T ss_dssp HHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSST--------------------T-EECCC
T ss_pred HHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCcccc--------------------c-eEEcc
Confidence 34455665556677899999999999 599999975444 699999997643 3 56678
Q ss_pred CCCCCcCC-CCccEEEecCcCcCchHHHHHHHHhh
Q psy425 219 ARKPYKKN-GPYDVIHFGSGVKHIPIEVSKLCRSQ 252 (254)
Q Consensus 219 ~~~~~~~~-~~fD~I~~~~~~~~~~~~l~~~lr~l 252 (254)
+..+.... ..||+|++...-.++.+++.+.-+..
T Consensus 79 iF~P~~~~Y~~~DLIYsirPP~El~~~i~~lA~~v 113 (153)
T 2k4m_A 79 ITSPRMEIYRGAALIYSIRPPAEIHSSLMRVADAV 113 (153)
T ss_dssp SSSCCHHHHTTEEEEEEESCCTTTHHHHHHHHHHH
T ss_pred CCCCcccccCCcCEEEEcCCCHHHHHHHHHHHHHc
Confidence 77654432 36999999988888888887776543
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.62 E-value=1.4e-07 Score=87.41 Aligned_cols=92 Identities=11% Similarity=0.023 Sum_probs=70.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCC-----------------CEEEEEeCCHHHHHHHHHHHHhhC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDK-----------------GHVTAVDHIPQLINLFMTKLKISY 202 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~-----------------~~v~gvD~s~~~l~~a~~~~~~~~ 202 (254)
...|++.+ ...++.+|||.|||||.+...+++.+... ..++|+|+++.+++.|+.|+..++
T Consensus 158 v~~mv~~l--~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g 235 (541)
T 2ar0_A 158 IKTIIHLL--KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD 235 (541)
T ss_dssp HHHHHHHH--CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHh--ccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC
Confidence 45566666 56778999999999999998888764221 269999999999999999987753
Q ss_pred CCcccCCC-----eeEEEEcCCCCCC-cCCCCccEEEecCcCc
Q psy425 203 PKLYKLYK-----IMDVVEWDARKPY-KKNGPYDVIHFGSGVK 239 (254)
Q Consensus 203 ~~~~~~~~-----v~~~~~~d~~~~~-~~~~~fD~I~~~~~~~ 239 (254)
..+ +. +.++|..... ....+||+|+++..+.
T Consensus 236 -----i~~~~~~~~~-I~~gDtL~~~~~~~~~fD~Vv~NPPf~ 272 (541)
T 2ar0_A 236 -----IEGNLDHGGA-IRLGNTLGSDGENLPKAHIVATNPPFG 272 (541)
T ss_dssp -----CCCBGGGTBS-EEESCTTSHHHHTSCCEEEEEECCCCT
T ss_pred -----CCccccccCC-eEeCCCcccccccccCCeEEEECCCcc
Confidence 333 78 8999986432 2345699999998763
No 272
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.62 E-value=1.9e-08 Score=86.82 Aligned_cols=75 Identities=20% Similarity=0.162 Sum_probs=53.8
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeC----CHHHHHHHHHHHHhhCCCcccCCCeeEEEEc-CCCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDH----IPQLINLFMTKLKISYPKLYKLYKIMDVVEW-DARKPYK 224 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~----s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~-d~~~~~~ 224 (254)
.+.++.+|||+|||+|.++..+++. + +|+|+|+ ++.+++.+. .+. .+.++++ ++.+ |+....
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~-~---~V~gvD~~~~~~~~~~~~~~--~~~-----~~~~~v~-~~~~~D~~~l~- 145 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL-K---NVREVKGLTKGGPGHEEPIP--MST-----YGWNLVR-LQSGVDVFFIP- 145 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS-T---TEEEEEEECCCSTTSCCCCC--CCS-----TTGGGEE-EECSCCTTTSC-
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc-C---CEEEEeccccCchhHHHHHH--hhh-----cCCCCeE-EEeccccccCC-
Confidence 4567899999999999999999987 3 5999999 554432111 111 1124688 9999 887532
Q ss_pred CCCCccEEEecCcC
Q psy425 225 KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ~~~~fD~I~~~~~~ 238 (254)
..+||+|++..++
T Consensus 146 -~~~fD~V~sd~~~ 158 (305)
T 2p41_A 146 -PERCDTLLCDIGE 158 (305)
T ss_dssp -CCCCSEEEECCCC
T ss_pred -cCCCCEEEECCcc
Confidence 3469999998775
No 273
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.59 E-value=7.4e-08 Score=81.39 Aligned_cols=85 Identities=21% Similarity=0.202 Sum_probs=70.6
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.+ .+.++..+||.+||.|..|..+++. .++|+|+|.++++++.|++ +.. ++++ ++++|.
T Consensus 11 l~e~le~L--~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~--------~rv~-lv~~~f 75 (285)
T 1wg8_A 11 YQEALDLL--AVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL--------PGLT-VVQGNF 75 (285)
T ss_dssp HHHHHHHH--TCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC--------TTEE-EEESCG
T ss_pred HHHHHHhh--CCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc--------CCEE-EEECCc
Confidence 78889999 7889999999999999999999987 3589999999999999998 632 4899 999999
Q ss_pred CCCC---c--CCCCccEEEecCcCc
Q psy425 220 RKPY---K--KNGPYDVIHFGSGVK 239 (254)
Q Consensus 220 ~~~~---~--~~~~fD~I~~~~~~~ 239 (254)
.... . ...+||.|++..++.
T Consensus 76 ~~l~~~L~~~g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 76 RHLKRHLAALGVERVDGILADLGVS 100 (285)
T ss_dssp GGHHHHHHHTTCSCEEEEEEECSCC
T ss_pred chHHHHHHHcCCCCcCEEEeCCccc
Confidence 7431 1 124699999887664
No 274
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.55 E-value=6.4e-08 Score=84.83 Aligned_cols=82 Identities=20% Similarity=0.174 Sum_probs=62.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccC---CCeeEEEEcCCCCCCc----C
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKL---YKIMDVVEWDARKPYK----K 225 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~---~~v~~~~~~d~~~~~~----~ 225 (254)
.+.+||+||||+|..+..+++.. + .+|++||+++.+++.|++++...+...+.. ++++ ++.+|+..... .
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~-vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQ-VLIEDCIPVLKRYAKE 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEE-EEESCHHHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEE-EEECcHHHHHHhhhcc
Confidence 57899999999999999988774 3 589999999999999999976421000011 2799 99999985332 2
Q ss_pred CCCccEEEecCc
Q psy425 226 NGPYDVIHFGSG 237 (254)
Q Consensus 226 ~~~fD~I~~~~~ 237 (254)
.++||+|++...
T Consensus 265 ~~~fDvII~D~~ 276 (364)
T 2qfm_A 265 GREFDYVINDLT 276 (364)
T ss_dssp TCCEEEEEEECC
T ss_pred CCCceEEEECCC
Confidence 467999999864
No 275
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.50 E-value=1.6e-07 Score=80.35 Aligned_cols=66 Identities=14% Similarity=0.072 Sum_probs=50.8
Q ss_pred cCCCCCEEEEEcCCC------ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEE-EEcCCCCC
Q psy425 150 KLLPGANVLDLGFGS------GFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDV-VEWDARKP 222 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~------G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~-~~~d~~~~ 222 (254)
.++++.+|||+|||+ |. ..++++.++.++|+|+|+++. + .+++ + +++|+...
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v----------~~v~-~~i~gD~~~~ 118 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V----------SDAD-STLIGDCATV 118 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B----------CSSS-EEEESCGGGC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C----------CCCE-EEEECccccC
Confidence 567899999999966 54 556777665679999999988 1 1588 9 99999864
Q ss_pred CcCCCCccEEEecCc
Q psy425 223 YKKNGPYDVIHFGSG 237 (254)
Q Consensus 223 ~~~~~~fD~I~~~~~ 237 (254)
... ++||+|+++..
T Consensus 119 ~~~-~~fD~Vvsn~~ 132 (290)
T 2xyq_A 119 HTA-NKWDLIISDMY 132 (290)
T ss_dssp CCS-SCEEEEEECCC
T ss_pred Ccc-CcccEEEEcCC
Confidence 333 56999999754
No 276
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.44 E-value=1.1e-06 Score=81.46 Aligned_cols=95 Identities=12% Similarity=-0.003 Sum_probs=71.6
Q ss_pred HHHHHHHhhhc--CCCCCEEEEEcCCCChHHHHHHHHcC--CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEE
Q psy425 140 QAACLQHLSDK--LLPGANVLDLGFGSGFMSCCMARMVG--DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVV 215 (254)
Q Consensus 140 ~~~~l~~l~~~--~~~~~~VLDiG~G~G~~t~~la~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 215 (254)
...|++.+... ..++.+|+|.+||||.+...+++... ....++|+|+++.++..|+.|+..++ ....++. +.
T Consensus 206 v~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g---i~~~~~~-I~ 281 (542)
T 3lkd_A 206 AKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG---VPIENQF-LH 281 (542)
T ss_dssp HHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT---CCGGGEE-EE
T ss_pred HHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC---CCcCccc-eE
Confidence 55566666321 34788999999999999988888753 23489999999999999999988764 1114688 99
Q ss_pred EcCCCCC---CcCCCCccEEEecCcC
Q psy425 216 EWDARKP---YKKNGPYDVIHFGSGV 238 (254)
Q Consensus 216 ~~d~~~~---~~~~~~fD~I~~~~~~ 238 (254)
++|.... .....+||+|++|..+
T Consensus 282 ~gDtL~~d~p~~~~~~fD~IvaNPPf 307 (542)
T 3lkd_A 282 NADTLDEDWPTQEPTNFDGVLMNPPY 307 (542)
T ss_dssp ESCTTTSCSCCSSCCCBSEEEECCCT
T ss_pred ecceecccccccccccccEEEecCCc
Confidence 9998743 1234679999999766
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.36 E-value=5.7e-07 Score=83.40 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=66.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCC--------------CCEEEEEeCCHHHHHHHHHHHHhhCCCc
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGD--------------KGHVTAVDHIPQLINLFMTKLKISYPKL 205 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~ 205 (254)
...|++.+ ...++ +|||.+||||.+...+++.... ...++|+|+++.++..|+.|+..++
T Consensus 234 v~lmv~ll--~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g--- 307 (544)
T 3khk_A 234 VTLIVEML--EPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG--- 307 (544)
T ss_dssp HHHHHHHH--CCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHH--hcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC---
Confidence 55666666 44454 9999999999998877654310 2379999999999999999988764
Q ss_pred ccCCCeeEEEEcCCCCC-CcCCCCccEEEecCcCc
Q psy425 206 YKLYKIMDVVEWDARKP-YKKNGPYDVIHFGSGVK 239 (254)
Q Consensus 206 ~~~~~v~~~~~~d~~~~-~~~~~~fD~I~~~~~~~ 239 (254)
...++. +.++|.... .....+||+|++|..+.
T Consensus 308 -i~~~i~-i~~gDtL~~~~~~~~~fD~Iv~NPPf~ 340 (544)
T 3khk_A 308 -IDFNFG-KKNADSFLDDQHPDLRADFVMTNPPFN 340 (544)
T ss_dssp -CCCBCC-SSSCCTTTSCSCTTCCEEEEEECCCSS
T ss_pred -CCcccc-eeccchhcCcccccccccEEEECCCcC
Confidence 223455 578887632 23345799999997763
No 278
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.29 E-value=5.8e-07 Score=77.70 Aligned_cols=88 Identities=22% Similarity=0.265 Sum_probs=72.7
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
...+++.| .+.+|..++|..||.|..|..+++.+++.++|+|+|.++++++.|+ ++ ...+++ +++++.
T Consensus 46 l~Evl~~L--~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--------~~~Rv~-lv~~nF 113 (347)
T 3tka_A 46 LDEAVNGL--NIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--------DDPRFS-IIHGPF 113 (347)
T ss_dssp THHHHHHT--CCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--------CCTTEE-EEESCG
T ss_pred HHHHHHhh--CCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--------cCCcEE-EEeCCH
Confidence 67888888 7889999999999999999999999888899999999999999984 43 235899 999998
Q ss_pred CCCC---cC---CCCccEEEecCcCc
Q psy425 220 RKPY---KK---NGPYDVIHFGSGVK 239 (254)
Q Consensus 220 ~~~~---~~---~~~fD~I~~~~~~~ 239 (254)
.... .. .+++|.|+.+.++.
T Consensus 114 ~~l~~~L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 114 SALGEYVAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp GGHHHHHHHTTCTTCEEEEEEECSCC
T ss_pred HHHHHHHHhcCCCCcccEEEECCccC
Confidence 7421 11 12599999998774
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.29 E-value=2.5e-06 Score=79.96 Aligned_cols=75 Identities=19% Similarity=0.123 Sum_probs=56.6
Q ss_pred CCEEEEEcCCCChHH---HHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCcc
Q psy425 154 GANVLDLGFGSGFMS---CCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYD 230 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t---~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD 230 (254)
+..|||+|||+|-+. +..++..+.+.+|++||.++ +...|++....++ ..++|+ ++++|+++...+ +++|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~----~~dkVt-VI~gd~eev~LP-EKVD 430 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEE----WGSQVT-VVSSDMREWVAP-EKAD 430 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHT----TGGGEE-EEESCTTTCCCS-SCEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhcc----CCCeEE-EEeCcceeccCC-cccC
Confidence 457999999999984 44444444434799999997 5667888888875 456799 999999974433 4699
Q ss_pred EEEec
Q psy425 231 VIHFG 235 (254)
Q Consensus 231 ~I~~~ 235 (254)
+|++-
T Consensus 431 IIVSE 435 (637)
T 4gqb_A 431 IIVSE 435 (637)
T ss_dssp EEECC
T ss_pred EEEEE
Confidence 99874
No 280
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.24 E-value=2.8e-06 Score=74.63 Aligned_cols=92 Identities=24% Similarity=0.225 Sum_probs=70.6
Q ss_pred HHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCc-ccCCCeeEEEEcCCCC
Q psy425 143 CLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKL-YKLYKIMDVVEWDARK 221 (254)
Q Consensus 143 ~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~v~~~~~~d~~~ 221 (254)
....| .+++|.+|||++||.|.-|..++... ..+.|+++|+++..++..++++.+.+... ....++. +...|...
T Consensus 140 ~~~~L--~~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~-v~~~D~~~ 215 (359)
T 4fzv_A 140 PVLAL--GLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVR-VTSWDGRK 215 (359)
T ss_dssp HHHHH--CCCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEE-EECCCGGG
T ss_pred HHHHh--CCCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceE-EEeCchhh
Confidence 34445 88999999999999999999999875 55689999999999999999998864211 1225788 88888864
Q ss_pred CC-cCCCCccEEEecCcC
Q psy425 222 PY-KKNGPYDVIHFGSGV 238 (254)
Q Consensus 222 ~~-~~~~~fD~I~~~~~~ 238 (254)
.. ...+.||.|++...+
T Consensus 216 ~~~~~~~~fD~VLlDaPC 233 (359)
T 4fzv_A 216 WGELEGDTYDRVLVDVPC 233 (359)
T ss_dssp HHHHSTTCEEEEEEECCC
T ss_pred cchhccccCCEEEECCcc
Confidence 22 224569999986554
No 281
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.16 E-value=2.2e-05 Score=66.92 Aligned_cols=85 Identities=19% Similarity=0.117 Sum_probs=65.7
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-CCCCc
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-KNGPY 229 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-~~~~f 229 (254)
.+...+||-||-|.|..+..+++.. +..+|+.||+++++++.|++.+.......+..++++ ++.+|+..... ..++|
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~-v~~~Dg~~~l~~~~~~y 158 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFK-LVIDDGVNFVNQTSQTF 158 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEE-EEESCTTTTTSCSSCCE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEE-EEechHHHHHhhccccC
Confidence 3456899999999999999888763 335899999999999999998754321123457899 99999985432 24579
Q ss_pred cEEEecCc
Q psy425 230 DVIHFGSG 237 (254)
Q Consensus 230 D~I~~~~~ 237 (254)
|+|++...
T Consensus 159 DvIi~D~~ 166 (294)
T 3o4f_A 159 DVIISDCT 166 (294)
T ss_dssp EEEEESCC
T ss_pred CEEEEeCC
Confidence 99998764
No 282
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.12 E-value=3.9e-06 Score=70.42 Aligned_cols=84 Identities=13% Similarity=0.056 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHc------CCC-----CEEEEEeCCH---HHH-----------HHHHHHHHhhCCCc-
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMV------GDK-----GHVTAVDHIP---QLI-----------NLFMTKLKISYPKL- 205 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~------~~~-----~~v~gvD~s~---~~l-----------~~a~~~~~~~~~~~- 205 (254)
.++.+|||||+|+|+.++.+++.. .+. .+++++|..| +.+ ..|++++.......
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 356799999999999998877764 442 4899999887 433 35666655410000
Q ss_pred ------c--cCCCeeEEEEcCCCCCCcC--C---CCccEEEecC
Q psy425 206 ------Y--KLYKIMDVVEWDARKPYKK--N---GPYDVIHFGS 236 (254)
Q Consensus 206 ------~--~~~~v~~~~~~d~~~~~~~--~---~~fD~I~~~~ 236 (254)
+ ...+++ ++.+|+.+..+. . .+||+|+..+
T Consensus 139 g~~r~~~~~~~~~l~-l~~GDa~~~l~~~~~~~~~~~D~iflD~ 181 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLD-LWFGDINELISQLDDSLNQKVDAWFLDG 181 (257)
T ss_dssp EEEEEEEC--CEEEE-EEESCHHHHGGGSCGGGTTCEEEEEECS
T ss_pred chhheeccCCceEEE-EEECcHHHHHhhcccccCCeEEEEEECC
Confidence 0 124678 999998753322 1 2699999975
No 283
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.10 E-value=1.1e-05 Score=68.97 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=46.5
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKIS 201 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 201 (254)
...++..+ -.+++.|||++||+|.++..+++++ . +++|+|+++++++.|++++...
T Consensus 225 ~~~~i~~~---~~~~~~vlD~f~GsGt~~~~a~~~g-~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 225 AERLVRMF---SFVGDVVLDPFAGTGTTLIAAARWG-R--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHH---CCTTCEEEETTCTTTHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHcC-C--eEEEEeCCHHHHHHHHHHHHHh
Confidence 44455544 2689999999999999999987764 3 6999999999999999998874
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.09 E-value=6.2e-06 Score=78.83 Aligned_cols=86 Identities=13% Similarity=0.040 Sum_probs=59.4
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCC--CCEEEEEeCCHHHHHHH--HHHHHhhCCCcccCCCeeEEEEcCCCCC-CcC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGD--KGHVTAVDHIPQLINLF--MTKLKISYPKLYKLYKIMDVVEWDARKP-YKK 225 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~--~~~v~gvD~s~~~l~~a--~~~~~~~~~~~~~~~~v~~~~~~d~~~~-~~~ 225 (254)
..++.+|||.|||+|.+...+++..+. ..+++|+|+++.+++.| +.++..+.. ..+..... +...|.... ...
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~L-lhGi~~~~-I~~dD~L~~~~~~ 396 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQL-VSSNNAPT-ITGEDVCSLNPED 396 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTT-CBTTBCCE-EECCCGGGCCGGG
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhh-hcCCCcce-EEecchhcccccc
Confidence 346889999999999999999887641 24799999999999999 555443210 00122335 555555542 123
Q ss_pred CCCccEEEecCcC
Q psy425 226 NGPYDVIHFGSGV 238 (254)
Q Consensus 226 ~~~fD~I~~~~~~ 238 (254)
..+||+|++|..+
T Consensus 397 ~~kFDVVIgNPPY 409 (878)
T 3s1s_A 397 FANVSVVVMNPPY 409 (878)
T ss_dssp GTTEEEEEECCBC
T ss_pred cCCCCEEEECCCc
Confidence 4579999999877
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.08 E-value=6.7e-06 Score=72.12 Aligned_cols=73 Identities=18% Similarity=0.094 Sum_probs=57.4
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.+|.+|||+||++|.+|..++++. ++|+|||..+ +- ..+. ..++|+ ++.+|+....+..++|
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~-l~----~~l~-------~~~~V~-~~~~d~~~~~~~~~~~ 271 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGP-MA----QSLM-------DTGQVT-WLREDGFKFRPTRSNI 271 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHTT---CEEEEECSSC-CC----HHHH-------TTTCEE-EECSCTTTCCCCSSCE
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhh-cC----hhhc-------cCCCeE-EEeCccccccCCCCCc
Confidence 36789999999999999999999884 3799999864 11 1222 245899 9999998665666679
Q ss_pred cEEEecCcC
Q psy425 230 DVIHFGSGV 238 (254)
Q Consensus 230 D~I~~~~~~ 238 (254)
|+|++..+.
T Consensus 272 D~vvsDm~~ 280 (375)
T 4auk_A 272 SWMVCDMVE 280 (375)
T ss_dssp EEEEECCSS
T ss_pred CEEEEcCCC
Confidence 999999876
No 286
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.04 E-value=9.4e-06 Score=75.01 Aligned_cols=91 Identities=13% Similarity=0.009 Sum_probs=68.6
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCC------------CCEEEEEeCCHHHHHHHHHHHHhhCCCccc
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGD------------KGHVTAVDHIPQLINLFMTKLKISYPKLYK 207 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~ 207 (254)
...|++.+ ...++.+|+|-+||||.+...+.+.... ...++|+|+++.+...|+-|+.-++
T Consensus 206 v~lmv~l~--~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg----- 278 (530)
T 3ufb_A 206 VRFMVEVM--DPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG----- 278 (530)
T ss_dssp HHHHHHHH--CCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT-----
T ss_pred HHHHHHhh--ccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC-----
Confidence 66667777 6778899999999999998877665421 1359999999999999999987763
Q ss_pred CCCeeEEEEcCCCCCC----cCCCCccEEEecCcC
Q psy425 208 LYKIMDVVEWDARKPY----KKNGPYDVIHFGSGV 238 (254)
Q Consensus 208 ~~~v~~~~~~d~~~~~----~~~~~fD~I~~~~~~ 238 (254)
..... +.++|..... ....+||+|+++..+
T Consensus 279 ~~~~~-I~~~dtL~~~~~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 279 LEYPR-IDPENSLRFPLREMGDKDRVDVILTNPPF 312 (530)
T ss_dssp CSCCE-EECSCTTCSCGGGCCGGGCBSEEEECCCS
T ss_pred Ccccc-ccccccccCchhhhcccccceEEEecCCC
Confidence 44456 7778865321 123469999999887
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.02 E-value=7.6e-06 Score=77.06 Aligned_cols=77 Identities=18% Similarity=0.061 Sum_probs=54.0
Q ss_pred CCEEEEEcCCCChHHHHH---HHHcC---------CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCC
Q psy425 154 GANVLDLGFGSGFMSCCM---ARMVG---------DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARK 221 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~l---a~~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~ 221 (254)
+..|||+|||+|.++... ++..+ ...+|++||.++.++..++.+.. ++ ..+.|+ ++.+|+++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng----~~d~Vt-VI~gd~ee 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT----WKRRVT-IIESDMRS 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT----TTTCSE-EEESCGGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC----CCCeEE-EEeCchhh
Confidence 458999999999997433 22122 22389999999988766665544 43 346799 99999986
Q ss_pred CCcC-----CCCccEEEecC
Q psy425 222 PYKK-----NGPYDVIHFGS 236 (254)
Q Consensus 222 ~~~~-----~~~fD~I~~~~ 236 (254)
...+ .+++|+|++-.
T Consensus 484 v~lp~~~~~~ekVDIIVSEl 503 (745)
T 3ua3_A 484 LPGIAKDRGFEQPDIIVSEL 503 (745)
T ss_dssp HHHHHHHTTCCCCSEEEECC
T ss_pred cccccccCCCCcccEEEEec
Confidence 4331 35699998864
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.99 E-value=2.2e-05 Score=66.63 Aligned_cols=97 Identities=7% Similarity=-0.038 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcC----CCCEEEEEeCCHH--------------------------HHHHHHHHHHhh
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVG----DKGHVTAVDHIPQ--------------------------LINLFMTKLKIS 201 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~----~~~~v~gvD~s~~--------------------------~l~~a~~~~~~~ 201 (254)
.....|||+|+..|+.++.++.... +.++|+++|..+. .++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 4467999999999999999887653 3568999996421 467789999886
Q ss_pred CCCcccCCCeeEEEEcCCCCCCc--CCCCccEEEecCcCc-CchHHHHHHHHhh
Q psy425 202 YPKLYKLYKIMDVVEWDARKPYK--KNGPYDVIHFGSGVK-HIPIEVSKLCRSQ 252 (254)
Q Consensus 202 ~~~~~~~~~v~~~~~~d~~~~~~--~~~~fD~I~~~~~~~-~~~~~l~~~lr~l 252 (254)
+ +..++|+ ++.||+.+..+ ..++||+|++.+... .....+...++.|
T Consensus 185 g---l~~~~I~-li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L 234 (282)
T 2wk1_A 185 D---LLDEQVR-FLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKV 234 (282)
T ss_dssp T---CCSTTEE-EEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGE
T ss_pred C---CCcCceE-EEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhc
Confidence 4 1137899 99999974332 235799999998652 2333343334433
No 289
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.86 E-value=5.3e-05 Score=66.28 Aligned_cols=70 Identities=17% Similarity=0.178 Sum_probs=57.2
Q ss_pred HHHHHHHhhhcCC------CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeE
Q psy425 140 QAACLQHLSDKLL------PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMD 213 (254)
Q Consensus 140 ~~~~l~~l~~~~~------~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~ 213 (254)
...+++.+ .+. +++.|||||.|.|.+|..|++...+ .+|+++|+++.++...++.+ . .++++
T Consensus 41 ~~~Iv~~~--~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~-~-------~~~l~- 108 (353)
T 1i4w_A 41 YNKIFDKL--DLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKF-E-------GSPLQ- 108 (353)
T ss_dssp HHHHHHHH--CGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHT-T-------TSSCE-
T ss_pred HHHHHHhc--cCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhc-c-------CCCEE-
Confidence 77788887 554 3689999999999999999987432 37999999999999888876 3 24899
Q ss_pred EEEcCCCC
Q psy425 214 VVEWDARK 221 (254)
Q Consensus 214 ~~~~d~~~ 221 (254)
++++|+..
T Consensus 109 ii~~D~l~ 116 (353)
T 1i4w_A 109 ILKRDPYD 116 (353)
T ss_dssp EECSCTTC
T ss_pred EEECCccc
Confidence 99999953
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.69 E-value=1.3e-05 Score=67.50 Aligned_cols=90 Identities=18% Similarity=0.059 Sum_probs=53.8
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.++.+|||+|||.|.++..+++..+ -..|+|+|+...+...+... .. ...++. ....++........++
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~~------~g~~ii-~~~~~~dv~~l~~~~~ 157 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-TT------LGWNLI-RFKDKTDVFNMEVIPG 157 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-CB------TTGGGE-EEECSCCGGGSCCCCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc-cc------CCCceE-EeeCCcchhhcCCCCc
Confidence 467889999999999999998886542 23689999986532221110 00 012333 3333322112234579
Q ss_pred cEEEecCcCcCchHHHHHHH
Q psy425 230 DVIHFGSGVKHIPIEVSKLC 249 (254)
Q Consensus 230 D~I~~~~~~~~~~~~l~~~l 249 (254)
|+|++..+.. ......+..
T Consensus 158 DvVLSDmApn-sG~~~~D~~ 176 (282)
T 3gcz_A 158 DTLLCDIGES-SPSIAVEEQ 176 (282)
T ss_dssp SEEEECCCCC-CSCHHHHHH
T ss_pred CEEEecCccC-CCChHHHHH
Confidence 9999998875 433333333
No 291
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.67 E-value=1.6e-05 Score=66.70 Aligned_cols=81 Identities=15% Similarity=0.020 Sum_probs=50.9
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
.+.++.+|||+|||+|.++..+++..+ ...|+|+|+..++....... .. ...++. ....++........+|
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~-~~------~g~~ii-~~~~~~dv~~l~~~~~ 141 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNV-QS------LGWNII-TFKDKTDIHRLEPVKC 141 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCC-CB------TTGGGE-EEECSCCTTTSCCCCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCccccccc-Cc------CCCCeE-EEeccceehhcCCCCc
Confidence 467889999999999999998886632 23688888875431000000 00 011455 5566654323345679
Q ss_pred cEEEecCcCc
Q psy425 230 DVIHFGSGVK 239 (254)
Q Consensus 230 D~I~~~~~~~ 239 (254)
|+|++..+..
T Consensus 142 DlVlsD~apn 151 (277)
T 3evf_A 142 DTLLCDIGES 151 (277)
T ss_dssp SEEEECCCCC
T ss_pred cEEEecCccC
Confidence 9999988765
No 292
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.67 E-value=1.4e-05 Score=65.49 Aligned_cols=90 Identities=18% Similarity=0.118 Sum_probs=60.2
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEc-CCCCCCcCCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEW-DARKPYKKNGP 228 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~-d~~~~~~~~~~ 228 (254)
.+.++.+|||+||++|.++...+...+. .+|+|+|+-..-.+.= ...+. .+-..|+ |+.+ |+....+ .+
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ghe~P-~~~~s-----~gwn~v~-fk~gvDv~~~~~--~~ 144 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPGHEEP-VPMST-----YGWNIVK-LMSGKDVFYLPP--EK 144 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTTSCCC-CCCCC-----TTTTSEE-EECSCCGGGCCC--CC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCCccCc-chhhh-----cCcCceE-EEeccceeecCC--cc
Confidence 5778999999999999999988877544 3799999975422100 00011 1335688 9999 9754332 56
Q ss_pred ccEEEecCcCcCchHHHHHHHH
Q psy425 229 YDVIHFGSGVKHIPIEVSKLCR 250 (254)
Q Consensus 229 fD~I~~~~~~~~~~~~l~~~lr 250 (254)
+|.|+|..+- .-|.+..++-|
T Consensus 145 ~DtllcDIge-Ss~~~~vE~~R 165 (267)
T 3p8z_A 145 CDTLLCDIGE-SSPSPTVEESR 165 (267)
T ss_dssp CSEEEECCCC-CCSCHHHHHHH
T ss_pred ccEEEEecCC-CCCChhhhhhH
Confidence 9999999876 44444444433
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.59 E-value=0.00014 Score=61.40 Aligned_cols=91 Identities=16% Similarity=0.017 Sum_probs=60.1
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEc-CCCCCCcCCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEW-DARKPYKKNGP 228 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~-d~~~~~~~~~~ 228 (254)
.+.++.+|||+||++|.++..++...+. ..|+|+|+...-.+.= ...++. +-..|. ++.+ |+....+ .+
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~~he~P-~~~~ql-----~w~lV~-~~~~~Dv~~l~~--~~ 160 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGPGHEEP-QLVQSY-----GWNIVT-MKSGVDVFYRPS--EC 160 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCSTTSCCC-CCCCBT-----TGGGEE-EECSCCTTSSCC--CC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCCCccCc-chhhhc-----CCcceE-EEeccCHhhCCC--CC
Confidence 5778999999999999999987766543 3799999985511000 000111 122377 8887 8764333 55
Q ss_pred ccEEEecCcCcCchHHHHHHHHh
Q psy425 229 YDVIHFGSGVKHIPIEVSKLCRS 251 (254)
Q Consensus 229 fD~I~~~~~~~~~~~~l~~~lr~ 251 (254)
+|+|+|..+ +.-|.+..++-|.
T Consensus 161 ~D~ivcDig-eSs~~~~ve~~Rt 182 (321)
T 3lkz_A 161 CDTLLCDIG-ESSSSAEVEEHRT 182 (321)
T ss_dssp CSEEEECCC-CCCSCHHHHHHHH
T ss_pred CCEEEEECc-cCCCChhhhhhHH
Confidence 999999988 6666655555443
No 294
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.58 E-value=0.00016 Score=60.51 Aligned_cols=48 Identities=21% Similarity=0.151 Sum_probs=41.9
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKIS 201 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 201 (254)
..+++.|||.+||+|..+..+.++. . +++|+|+++..++.|++++..+
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~g-r--~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKLG-R--NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHC-
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC-C--eEEEEeCCHHHHHHHHHHHHhc
Confidence 4689999999999999999877664 4 7999999999999999998764
No 295
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.36 E-value=0.00057 Score=60.99 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCCCChHHHHHH-HHcCCCCEEEEEeCCHHHHHHHHHHHHh--hCCCcccC-CCeeEEEEcCCC
Q psy425 151 LLPGANVLDLGFGSGFMSCCMA-RMVGDKGHVTAVDHIPQLINLFMTKLKI--SYPKLYKL-YKIMDVVEWDAR 220 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la-~~~~~~~~v~gvD~s~~~l~~a~~~~~~--~~~~~~~~-~~v~~~~~~d~~ 220 (254)
+.++..|+|||++.|..+..++ +..++.++|+++|.+|...+..++|+.. |+ .. .+++ ++..-+.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~----~~~~~v~-~~~~al~ 292 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDT----NFASRIT-VHGCGAG 292 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTS----TTGGGEE-EECSEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhcc----CCCCCEE-EEEeEEE
Confidence 4688999999999999999988 5554447999999999999999999987 32 23 5777 6655443
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.36 E-value=4.6e-05 Score=63.25 Aligned_cols=85 Identities=21% Similarity=0.152 Sum_probs=51.9
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHH--cCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCe---eEEEEc-CCCCC
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARM--VGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKI---MDVVEW-DARKP 222 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~--~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v---~~~~~~-d~~~~ 222 (254)
-++|+.+|||+||+.|.++..+++. .+. .|.++|+|+. . .... ....++ + |..+ |+...
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~--~--------~P~~---~~~~Gv~~i~-~~~G~Df~~~ 135 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGH--E--------EPML---MQSYGWNIVT-MKSGVDVFYK 135 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTS--C--------CCCC---CCSTTGGGEE-EECSCCGGGS
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccc--c--------CCCc---ccCCCceEEE-eeccCCccCC
Confidence 4779999999999999999999887 432 2344555521 0 0000 000233 4 5557 98752
Q ss_pred CcCCCCccEEEecCcCcCchHHHHHHHHh
Q psy425 223 YKKNGPYDVIHFGSGVKHIPIEVSKLCRS 251 (254)
Q Consensus 223 ~~~~~~fD~I~~~~~~~~~~~~l~~~lr~ 251 (254)
...++|+|++..+-. ......++.|.
T Consensus 136 --~~~~~DvVLSDMAPn-SG~~~vD~~Rs 161 (269)
T 2px2_A 136 --PSEISDTLLCDIGES-SPSAEIEEQRT 161 (269)
T ss_dssp --CCCCCSEEEECCCCC-CSCHHHHHHHH
T ss_pred --CCCCCCEEEeCCCCC-CCccHHHHHHH
Confidence 234699999998764 44444444443
No 297
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.22 E-value=0.00033 Score=61.63 Aligned_cols=82 Identities=21% Similarity=0.184 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCc---ccCCCeeEEEEcCCCCCC----c
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKL---YKLYKIMDVVEWDARKPY----K 224 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~---~~~~~v~~~~~~d~~~~~----~ 224 (254)
.+..+||-||-|.|.....+.+.- . .+|+.||+++++++.|++.+....... ...++++ ++.+|+.... .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~-~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~-vii~Da~~fl~~~~~ 280 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQ-VLIEDCIPVLKRYAK 280 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEE-EEESCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcC-C-ceeEEEccCHHHHHHHHhhchhhhhhhhcccccccee-eehHHHHHHHHhhhh
Confidence 356899999999999999888763 3 589999999999999999864321000 1124688 9999987422 1
Q ss_pred CCCCccEEEecC
Q psy425 225 KNGPYDVIHFGS 236 (254)
Q Consensus 225 ~~~~fD~I~~~~ 236 (254)
...+||+|++..
T Consensus 281 ~~~~yDvIIvDl 292 (381)
T 3c6k_A 281 EGREFDYVINDL 292 (381)
T ss_dssp HTCCEEEEEEEC
T ss_pred ccCceeEEEECC
Confidence 245699999874
No 298
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.00 E-value=0.0026 Score=56.11 Aligned_cols=74 Identities=27% Similarity=0.157 Sum_probs=56.1
Q ss_pred CEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc--------CC
Q psy425 155 ANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK--------KN 226 (254)
Q Consensus 155 ~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~--------~~ 226 (254)
.+|+|+.||.|.++..+.+.+.. .|.++|+++.+++..+.|. ++.. ++++|+..... ..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~--~v~avE~d~~a~~t~~~N~----------~~~~-~~~~DI~~~~~~~~~~~~~~~ 69 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFD--VKMAVEIDQHAINTHAINF----------PRSL-HVQEDVSLLNAEIIKGFFKND 69 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCE--EEEEECSCHHHHHHHHHHC----------TTSE-EECCCGGGCCHHHHHHHHCSC
T ss_pred CeEEEEccCcCHHHHHHHHCCCc--EEEEEeCCHHHHHHHHHhC----------CCCc-eEecChhhcCHHHHHhhcccC
Confidence 58999999999999998887533 5789999999888777763 2456 78888875321 13
Q ss_pred CCccEEEecCcCcCc
Q psy425 227 GPYDVIHFGSGVKHI 241 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~ 241 (254)
..+|+|+.+..+..+
T Consensus 70 ~~~D~i~ggpPCQ~f 84 (376)
T 3g7u_A 70 MPIDGIIGGPPCQGF 84 (376)
T ss_dssp CCCCEEEECCCCCTT
T ss_pred CCeeEEEecCCCCCc
Confidence 469999998876443
No 299
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.95 E-value=0.00045 Score=58.45 Aligned_cols=81 Identities=19% Similarity=0.056 Sum_probs=48.3
Q ss_pred cCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCc
Q psy425 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~f 229 (254)
-+.++.+|||+||++|.++..+++..+ -..|+|+|+...+...... ... ...++. ....++........++
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~------~~~~iv-~~~~~~di~~l~~~~~ 148 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQT------LGWNIV-KFKDKSNVFTMPTEPS 148 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCB------TTGGGE-EEECSCCTTTSCCCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccc------cCCceE-EeecCceeeecCCCCc
Confidence 456899999999999999999997642 2368899997542100000 000 011333 3333222112234579
Q ss_pred cEEEecCcCc
Q psy425 230 DVIHFGSGVK 239 (254)
Q Consensus 230 D~I~~~~~~~ 239 (254)
|+|++..+..
T Consensus 149 DlVlsD~APn 158 (300)
T 3eld_A 149 DTLLCDIGES 158 (300)
T ss_dssp SEEEECCCCC
T ss_pred CEEeecCcCC
Confidence 9999987765
No 300
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.72 E-value=0.0028 Score=55.16 Aligned_cols=73 Identities=15% Similarity=0.106 Sum_probs=54.1
Q ss_pred CEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC---CCCccE
Q psy425 155 ANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK---NGPYDV 231 (254)
Q Consensus 155 ~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~---~~~fD~ 231 (254)
.+|+|+.||.|.++..+...+..-..|.++|+++.+++..+.|.. +.. +..+|+...... ...+|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~----------~~~-~~~~Di~~~~~~~~~~~~~D~ 71 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP----------HTQ-LLAKTIEGITLEEFDRLSFDM 71 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT----------TSC-EECSCGGGCCHHHHHHHCCSE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc----------ccc-cccCCHHHccHhHcCcCCcCE
Confidence 579999999999999988774211259999999999988888853 345 778888753321 114899
Q ss_pred EEecCcC
Q psy425 232 IHFGSGV 238 (254)
Q Consensus 232 I~~~~~~ 238 (254)
|+.+..+
T Consensus 72 l~~gpPC 78 (343)
T 1g55_A 72 ILMSPPC 78 (343)
T ss_dssp EEECCC-
T ss_pred EEEcCCC
Confidence 9998765
No 301
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.61 E-value=0.016 Score=51.16 Aligned_cols=80 Identities=13% Similarity=0.034 Sum_probs=51.3
Q ss_pred CCEEEEEcCCCChHHHHHHHH-------------c---CCCCEEEEEeCC-----------HHHHHHHHHHHHhhCCCcc
Q psy425 154 GANVLDLGFGSGFMSCCMARM-------------V---GDKGHVTAVDHI-----------PQLINLFMTKLKISYPKLY 206 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~-------------~---~~~~~v~gvD~s-----------~~~l~~a~~~~~~~~~~~~ 206 (254)
..+|+|+||++|..|+.+... . .+.-+|+..|+- +.+.+.+++. .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g---- 125 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NG---- 125 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TC----
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---cc----
Confidence 578999999999999887665 1 123368888887 4444332221 11
Q ss_pred cCCCeeEEEEcCCC---CCCcCCCCccEEEecCcCcCc
Q psy425 207 KLYKIMDVVEWDAR---KPYKKNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 207 ~~~~v~~~~~~d~~---~~~~~~~~fD~I~~~~~~~~~ 241 (254)
...+.- |..+... ....+.+++|+|+++.++|.+
T Consensus 126 ~~~~~~-f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWl 162 (384)
T 2efj_A 126 RKIGSC-LIGAMPGSFYSRLFPEESMHFLHSCYCLHWL 162 (384)
T ss_dssp CCTTSE-EEEECCSCTTSCCSCTTCEEEEEEESCTTBC
T ss_pred CCCCce-EEEecchhhhhccCCCCceEEEEecceeeec
Confidence 112334 6666554 334556779999999999754
No 302
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.55 E-value=0.014 Score=51.35 Aligned_cols=88 Identities=13% Similarity=0.012 Sum_probs=51.4
Q ss_pred CCEEEEEcCCCChHHHHHHH--------Hc------CCCCEEEEEeCCHHHHHHHHHHHHhhCCCc------c-cCCCee
Q psy425 154 GANVLDLGFGSGFMSCCMAR--------MV------GDKGHVTAVDHIPQLINLFMTKLKISYPKL------Y-KLYKIM 212 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~--------~~------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~------~-~~~~v~ 212 (254)
..+|+|+|||+|..|+.+.. .. .+.-+|+..|+-..-....=+.+.....+. . ...+.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999999988732 22 133478888887766544433333210000 0 000112
Q ss_pred EEEE---cCCCCCCcCCCCccEEEecCcCcCch
Q psy425 213 DVVE---WDARKPYKKNGPYDVIHFGSGVKHIP 242 (254)
Q Consensus 213 ~~~~---~d~~~~~~~~~~fD~I~~~~~~~~~~ 242 (254)
|.. +.......+.++||+|+++.++|.+.
T Consensus 133 -f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls 164 (374)
T 3b5i_A 133 -FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLS 164 (374)
T ss_dssp -EEEEEESCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred -EEEecChhhhcccCCCcceEEEEecceeeeec
Confidence 333 33333345567899999999997664
No 303
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.52 E-value=0.0055 Score=52.96 Aligned_cols=71 Identities=14% Similarity=0.082 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-CCCCccE
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-KNGPYDV 231 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-~~~~fD~ 231 (254)
.+.+++|+.||+|.++..+...+.. .|.++|+++.+++..+.|.... . ++|+..... ....+|+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~--~v~~~e~d~~a~~t~~~N~~~~------------~-~~Di~~~~~~~~~~~D~ 74 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAE--CVYSNEWDKYAQEVYEMNFGEK------------P-EGDITQVNEKTIPDHDI 74 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCE--EEEEECCCHHHHHHHHHHHSCC------------C-BSCGGGSCGGGSCCCSE
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCe--EEEEEeCCHHHHHHHHHHcCCC------------C-cCCHHHcCHhhCCCCCE
Confidence 3579999999999999998877533 6899999999998888886431 1 366653221 1224899
Q ss_pred EEecCcC
Q psy425 232 IHFGSGV 238 (254)
Q Consensus 232 I~~~~~~ 238 (254)
|+.+..+
T Consensus 75 l~~gpPC 81 (327)
T 2c7p_A 75 LCAGFPC 81 (327)
T ss_dssp EEEECCC
T ss_pred EEECCCC
Confidence 9888665
No 304
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.43 E-value=0.0011 Score=56.03 Aligned_cols=76 Identities=13% Similarity=0.081 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC----CcCCCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP----YKKNGP 228 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~----~~~~~~ 228 (254)
.+..+||+-+|||.+++.+.... .+++.+|.++..++..++|+.. ..+++ ++..|+... .++..+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~---d~~vfvE~~~~a~~~L~~Nl~~-------~~~~~-V~~~D~~~~L~~l~~~~~~ 159 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ---DRLYLCELHPTEYNFLLKLPHF-------NKKVY-VNHTDGVSKLNALLPPPEK 159 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT---SEEEEECCSHHHHHHHTTSCCT-------TSCEE-EECSCHHHHHHHHCSCTTS
T ss_pred cCCCceeEeCCcHHHHHHHcCCC---CeEEEEeCCHHHHHHHHHHhCc-------CCcEE-EEeCcHHHHHHHhcCCCCC
Confidence 45678999999999999877632 3799999999999999998764 35799 999997521 123346
Q ss_pred ccEEEecCcCc
Q psy425 229 YDVIHFGSGVK 239 (254)
Q Consensus 229 fD~I~~~~~~~ 239 (254)
||+|++...+.
T Consensus 160 fdLVfiDPPYe 170 (283)
T 2oo3_A 160 RGLIFIDPSYE 170 (283)
T ss_dssp CEEEEECCCCC
T ss_pred ccEEEECCCCC
Confidence 99999998875
No 305
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.21 E-value=0.0065 Score=52.30 Aligned_cols=56 Identities=14% Similarity=0.100 Sum_probs=44.9
Q ss_pred HHHHHHHhhhcCCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Q psy425 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKIS 201 (254)
Q Consensus 140 ~~~~l~~l~~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 201 (254)
...++... ..+|+.|||..||+|..+.+..++ +. +.+|+|+++..++.+++++...
T Consensus 242 ~~~~i~~~---~~~~~~VlDpF~GsGtt~~aa~~~-gr--~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 242 PEFFIRML---TEPDDLVVDIFGGSNTTGLVAERE-SR--KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp HHHHHHHH---CCTTCEEEETTCTTCHHHHHHHHT-TC--EEEEEESCHHHHHHHHGGGSCS
T ss_pred HHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHc-CC--CEEEEeCCHHHHHHHHHHHHhc
Confidence 44444433 568999999999999988886655 44 7999999999999999998763
No 306
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.09 E-value=0.012 Score=50.69 Aligned_cols=48 Identities=25% Similarity=0.270 Sum_probs=40.1
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCH---HHHHHHHHHHHhh
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIP---QLINLFMTKLKIS 201 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~---~~l~~a~~~~~~~ 201 (254)
..+|+.|||..||+|..+.+..++. . +.+|+|+++ +.++.+++++...
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~-r--~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEG-R--NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHT-C--EEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcC-C--cEEEEECCccHHHHHHHHHHHHHHc
Confidence 4689999999999999998877664 4 699999999 9999999998764
No 307
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.64 E-value=0.02 Score=49.11 Aligned_cols=70 Identities=14% Similarity=0.045 Sum_probs=51.3
Q ss_pred CEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-CCCCccEEE
Q psy425 155 ANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-KNGPYDVIH 233 (254)
Q Consensus 155 ~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-~~~~fD~I~ 233 (254)
.+|||+.||.|.++..+.+.+-. .|.++|+++.+++.-+.|. .-. ++.+|+.+... .-..+|+++
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~--~v~a~e~d~~a~~ty~~N~-----------~~~-~~~~DI~~i~~~~~~~~D~l~ 66 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFR--IICANEYDKSIWKTYESNH-----------SAK-LIKGDISKISSDEFPKCDGII 66 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCE--EEEEEECCTTTHHHHHHHC-----------CSE-EEESCGGGCCGGGSCCCSEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHHC-----------CCC-cccCChhhCCHhhCCcccEEE
Confidence 37999999999999988766433 5789999999877766663 124 77899875332 223589998
Q ss_pred ecCcC
Q psy425 234 FGSGV 238 (254)
Q Consensus 234 ~~~~~ 238 (254)
.+..+
T Consensus 67 ggpPC 71 (331)
T 3ubt_Y 67 GGPPS 71 (331)
T ss_dssp CCCCG
T ss_pred ecCCC
Confidence 87755
No 308
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.57 E-value=0.022 Score=49.31 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=52.6
Q ss_pred CEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC---CCCccE
Q psy425 155 ANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK---NGPYDV 231 (254)
Q Consensus 155 ~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~---~~~fD~ 231 (254)
-+++|+.||.|.++..+.+.+-..-.|.++|+++.+++.-+.|.. ... +..+|+...... ...+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~----------~~~-~~~~DI~~~~~~~~~~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP----------ETN-LLNRNIQQLTPQVIKKWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT----------TSC-EECCCGGGCCHHHHHHTTCCE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC----------CCc-eeccccccCCHHHhccCCCCE
Confidence 479999999999999987764211258899999998877777643 344 667888743221 124899
Q ss_pred EEecCcCc
Q psy425 232 IHFGSGVK 239 (254)
Q Consensus 232 I~~~~~~~ 239 (254)
++.+..+.
T Consensus 73 l~ggpPCQ 80 (333)
T 4h0n_A 73 ILMSPPCQ 80 (333)
T ss_dssp EEECCCCC
T ss_pred EEecCCCc
Confidence 98887653
No 309
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.51 E-value=0.03 Score=47.57 Aligned_cols=76 Identities=20% Similarity=0.095 Sum_probs=54.2
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcCCCCE-EEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC----
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGH-VTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK---- 225 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~---- 225 (254)
.....+++|+.||.|.++..+.+.+.. .. |.++|+++.+++..+.|.. ... +..+|+......
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~aG~~-~~~v~a~E~d~~a~~ty~~N~~----------~~~-~~~~DI~~i~~~~i~~ 80 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDLGIQ-VDRYIASEVCEDSITVGMVRHQ----------GKI-MYVGDVRSVTQKHIQE 80 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHTTBC-EEEEEEECCCHHHHHHHHHHTT----------TCE-EEECCGGGCCHHHHHH
T ss_pred cCCCCEEEEeCcCccHHHHHHHHCCCc-cceEEEEECCHHHHHHHHHhCC----------CCc-eeCCChHHccHHHhcc
Confidence 345679999999999999988776433 22 6999999998877666532 345 778888753211
Q ss_pred CCCccEEEecCcC
Q psy425 226 NGPYDVIHFGSGV 238 (254)
Q Consensus 226 ~~~fD~I~~~~~~ 238 (254)
...+|+|+.+..+
T Consensus 81 ~~~~Dll~ggpPC 93 (295)
T 2qrv_A 81 WGPFDLVIGGSPC 93 (295)
T ss_dssp TCCCSEEEECCCC
T ss_pred cCCcCEEEecCCC
Confidence 2358999888655
No 310
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.31 E-value=0.41 Score=42.12 Aligned_cols=78 Identities=21% Similarity=0.137 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC------CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG------DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKN 226 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~ 226 (254)
..-.|+|+|+|+|.+...+.+.+. ...+++.||+|+.+.+.=++++.. .++|. +. .++.+ .+.
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~-------~~~v~-W~-~~l~~-lp~- 148 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG-------IRNIH-WH-DSFED-VPE- 148 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT-------CSSEE-EE-SSGGG-SCC-
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC-------CCCeE-Ee-CChhh-cCC-
Confidence 345799999999999887766532 223799999999988765555443 12455 43 22222 111
Q ss_pred CCccEEEecCcCcCch
Q psy425 227 GPYDVIHFGSGVKHIP 242 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~~ 242 (254)
. .=+|++|..|..+|
T Consensus 149 ~-~~~viANE~fDAlP 163 (387)
T 1zkd_A 149 G-PAVILANEYFDVLP 163 (387)
T ss_dssp S-SEEEEEESSGGGSC
T ss_pred C-CeEEEeccccccCc
Confidence 1 34677777766555
No 311
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.20 E-value=0.029 Score=48.40 Aligned_cols=76 Identities=12% Similarity=0.019 Sum_probs=53.6
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCCCCEE-EEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcC---CCCc
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGDKGHV-TAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKK---NGPY 229 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~~~~v-~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~---~~~f 229 (254)
.-+++|+.||.|.++..+.+.+-..-.| .++|+++.+++..+.|... . +..+|+...... ...+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----------~-~~~~DI~~~~~~~i~~~~~ 77 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----------E-VQVKNLDSISIKQIESLNC 77 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----------C-CBCCCTTTCCHHHHHHTCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----------C-cccCChhhcCHHHhccCCC
Confidence 4589999999999999987764211146 7999999998888887533 1 345777643221 1248
Q ss_pred cEEEecCcCcCc
Q psy425 230 DVIHFGSGVKHI 241 (254)
Q Consensus 230 D~I~~~~~~~~~ 241 (254)
|+++.+..+..+
T Consensus 78 Dil~ggpPCQ~f 89 (327)
T 3qv2_A 78 NTWFMSPPCQPY 89 (327)
T ss_dssp CEEEECCCCTTC
T ss_pred CEEEecCCccCc
Confidence 999988776555
No 312
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.05 E-value=0.066 Score=45.31 Aligned_cols=77 Identities=12% Similarity=-0.004 Sum_probs=51.1
Q ss_pred HHHHHHHhhh---cCCCCCEEEEEcC------CCChHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHHHHHhhCCCcccCC
Q psy425 140 QAACLQHLSD---KLLPGANVLDLGF------GSGFMSCCMARMVGDK-GHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209 (254)
Q Consensus 140 ~~~~l~~l~~---~~~~~~~VLDiG~------G~G~~t~~la~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~ 209 (254)
+.++.+.+.. .++.+++|||+|+ ..|. ..+.+. ++. +.|+++|+.+-. ..
T Consensus 93 ytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~-~p~g~~VVavDL~~~~-----------------sd 152 (344)
T 3r24_A 93 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQW-LPTGTLLVDSDLNDFV-----------------SD 152 (344)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHH-SCTTCEEEEEESSCCB-----------------CS
T ss_pred HHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHh-CCCCcEEEEeeCcccc-----------------cC
Confidence 5566666632 2457999999997 3444 444555 455 599999998532 11
Q ss_pred CeeEEEEcCCCCCCcCCCCccEEEecCcC
Q psy425 210 KIMDVVEWDARKPYKKNGPYDVIHFGSGV 238 (254)
Q Consensus 210 ~v~~~~~~d~~~~~~~~~~fD~I~~~~~~ 238 (254)
.-. ++++|.... ....+||+|++..+-
T Consensus 153 a~~-~IqGD~~~~-~~~~k~DLVISDMAP 179 (344)
T 3r24_A 153 ADS-TLIGDCATV-HTANKWDLIISDMYD 179 (344)
T ss_dssp SSE-EEESCGGGE-EESSCEEEEEECCCC
T ss_pred CCe-EEEcccccc-ccCCCCCEEEecCCC
Confidence 125 789997642 234679999998765
No 313
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.05 E-value=0.014 Score=51.06 Aligned_cols=85 Identities=13% Similarity=0.063 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHH---------------cCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEc
Q psy425 153 PGANVLDLGFGSGFMSCCMARM---------------VGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEW 217 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~---------------~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~ 217 (254)
..-+|+|+||++|..|+.+... -.+.-+|+..|+-.+....+-+.+.... ...+.. |..+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~----~~~~~~-f~~g 125 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN----DVDGVC-FING 125 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC----SCTTCE-EEEE
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc----ccCCCE-EEEe
Confidence 3468999999999877654333 1233478999999988877777665310 001234 5555
Q ss_pred CCC---CCCcCCCCccEEEecCcCcCch
Q psy425 218 DAR---KPYKKNGPYDVIHFGSGVKHIP 242 (254)
Q Consensus 218 d~~---~~~~~~~~fD~I~~~~~~~~~~ 242 (254)
... ....+.+++|+|+++.+++.+.
T Consensus 126 vpgSFy~rlfp~~S~d~v~Ss~aLHWls 153 (359)
T 1m6e_X 126 VPGSFYGRLFPRNTLHFIHSSYSLMWLS 153 (359)
T ss_dssp EESCSSSCCSCTTCBSCEEEESCTTBCS
T ss_pred cchhhhhccCCCCceEEEEehhhhhhcc
Confidence 433 3445667899999999997543
No 314
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.75 E-value=0.025 Score=51.41 Aligned_cols=78 Identities=14% Similarity=0.031 Sum_probs=54.2
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc---------
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK--------- 224 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~--------- 224 (254)
.-+++|+.||.|.++..+.+.+.. .|.++|+++.+++.-+.|... .+... +..+|+.....
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~--~v~avE~d~~A~~ty~~N~~~-------~p~~~-~~~~DI~~i~~~~~~~~~~~ 157 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQ--CVFTSEWNKHAVRTYKANHYC-------DPATH-HFNEDIRDITLSHQEGVSDE 157 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEE--EEEEECCCHHHHHHHHHHSCC-------CTTTC-EEESCTHHHHCTTCTTSCHH
T ss_pred cceEEEecCCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHhccc-------CCCcc-eeccchhhhhhccccccchh
Confidence 358999999999999988765422 589999999988777766421 12445 67788763210
Q ss_pred --------CCCCccEEEecCcCcCc
Q psy425 225 --------KNGPYDVIHFGSGVKHI 241 (254)
Q Consensus 225 --------~~~~fD~I~~~~~~~~~ 241 (254)
....+|+|+.+..+..+
T Consensus 158 ~~~~~i~~~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 158 AAAEHIRQHIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp HHHHHHHHHSCCCSEEEEECCCCCC
T ss_pred hHHhhhhhcCCCCCEEEecCCCcch
Confidence 11358999988776443
No 315
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=93.37 E-value=0.21 Score=44.60 Aligned_cols=47 Identities=17% Similarity=0.188 Sum_probs=37.2
Q ss_pred CCEEEEEcCCCChHHHHHHHHcC---C-CCEEEEEeCCHHHHHHHHHHHHh
Q psy425 154 GANVLDLGFGSGFMSCCMARMVG---D-KGHVTAVDHIPQLINLFMTKLKI 200 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~---~-~~~v~gvD~s~~~l~~a~~~~~~ 200 (254)
.-.|+|+|+|+|.+...+.+.+. + ..+++.||+|+.+.+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 47999999999998877765442 1 23799999999998887777765
No 316
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.70 E-value=0.038 Score=59.65 Aligned_cols=81 Identities=20% Similarity=0.313 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCC----CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC-CcCC
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGD----KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP-YKKN 226 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~-~~~~ 226 (254)
.+..+|||||.|+|..+..+...... ...++..|+++...+.|++++... +++ ....|...+ ....
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~--------di~-~~~~d~~~~~~~~~ 1309 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL--------HVT-QGQWDPANPAPGSL 1309 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH--------TEE-EECCCSSCCCC---
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc--------ccc-cccccccccccCCC
Confidence 35779999999999887766665532 236888999999988888887652 344 333344321 1123
Q ss_pred CCccEEEecCcCcCc
Q psy425 227 GPYDVIHFGSGVKHI 241 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~ 241 (254)
..||+|++.++++..
T Consensus 1310 ~~ydlvia~~vl~~t 1324 (2512)
T 2vz8_A 1310 GKADLLVCNCALATL 1324 (2512)
T ss_dssp --CCEEEEECC----
T ss_pred CceeEEEEccccccc
Confidence 459999999988643
No 317
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=92.49 E-value=1.5 Score=37.58 Aligned_cols=91 Identities=14% Similarity=0.030 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCC----------------CcccCCCeeEEE
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYP----------------KLYKLYKIMDVV 215 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~----------------~~~~~~~v~~~~ 215 (254)
.+...|+.+|||.......+.... +..+++-||. |+.++.-++.+.+.+. ..+...+.. ++
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-~v 172 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYK-LA 172 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEE-EE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceE-EE
Confidence 456799999999999988887653 3446777887 8888887777766310 000125788 99
Q ss_pred EcCCCCC-Cc--------CCCCccEEEecCcCcCchHHH
Q psy425 216 EWDARKP-YK--------KNGPYDVIHFGSGVKHIPIEV 245 (254)
Q Consensus 216 ~~d~~~~-~~--------~~~~fD~I~~~~~~~~~~~~l 245 (254)
.+|+.+. +. +.+...++++-+++..+++.-
T Consensus 173 ~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~ 211 (334)
T 1rjd_A 173 ACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNE 211 (334)
T ss_dssp ECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHH
T ss_pred ecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHH
Confidence 9999752 21 223467888889998887753
No 318
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.47 E-value=0.26 Score=48.56 Aligned_cols=44 Identities=16% Similarity=0.037 Sum_probs=34.9
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKL 198 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~ 198 (254)
..+++|+.||.|.++..|.+.+-. -.+.++|+++.+++.-+.|.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~-~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGIS-DTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSE-EEEEEECSSHHHHHHHHHHC
T ss_pred CCeEEEeccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhC
Confidence 348999999999999998776531 14889999999887766663
No 319
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.39 E-value=0.44 Score=34.93 Aligned_cols=69 Identities=14% Similarity=0.064 Sum_probs=45.1
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc----CCCC
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK----KNGP 228 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~----~~~~ 228 (254)
..+|+=+|+ |.++..+++.+.. ..+|+++|.+++.++.+++. .+. ++.+|..+... ....
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~------------~~~-~~~gd~~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE------------GFD-AVIADPTDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------------TCE-EEECCTTCHHHHHHSCCTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC------------CCc-EEECCCCCHHHHHhCCccc
Confidence 457888888 5566666665422 23699999999877665432 356 88888874311 1234
Q ss_pred ccEEEecCc
Q psy425 229 YDVIHFGSG 237 (254)
Q Consensus 229 fD~I~~~~~ 237 (254)
+|+|++...
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 798887654
No 320
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.00 E-value=0.28 Score=36.28 Aligned_cols=69 Identities=7% Similarity=0.033 Sum_probs=44.2
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--c--CCCC
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY--K--KNGP 228 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~--~--~~~~ 228 (254)
..+|+=+|+ |.++..+++.+.. ...|+++|.+++.++.+++. .+. ++.+|..... . ....
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~------------g~~-~i~gd~~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRER------------GVR-AVLGNAANEEIMQLAHLEC 71 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------------TCE-EEESCTTSHHHHHHTTGGG
T ss_pred CCCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc------------CCC-EEECCCCCHHHHHhcCccc
Confidence 457888887 5555555554422 22699999999988766541 466 8889986421 1 1234
Q ss_pred ccEEEecCc
Q psy425 229 YDVIHFGSG 237 (254)
Q Consensus 229 fD~I~~~~~ 237 (254)
.|+|++...
T Consensus 72 ad~vi~~~~ 80 (140)
T 3fwz_A 72 AKWLILTIP 80 (140)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEECC
Confidence 788887643
No 321
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.86 E-value=0.3 Score=42.81 Aligned_cols=46 Identities=28% Similarity=0.444 Sum_probs=37.7
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |.++..+|+..+. .+|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGA-ACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH
Confidence 688999999999976 7788888887642 379999999998877653
No 322
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.55 E-value=0.49 Score=40.41 Aligned_cols=45 Identities=33% Similarity=0.379 Sum_probs=38.3
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. +|+++|.+++.++.+++
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGL--RVAAVDIDDAKLNLARR 208 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHH
Confidence 678999999999975 7888888888765 89999999998887755
No 323
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.07 E-value=1.6 Score=35.89 Aligned_cols=78 Identities=22% Similarity=0.266 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
+|+.+|=-|+++|. +..+++.+ ...++|+.+|.+++.++.+.+.+... ..++. ++.+|+.+..
T Consensus 6 ~gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~------g~~~~-~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 6 KNKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM------GKEVL-GVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc------CCcEE-EEEccCCCHHHHHHHHHH
Confidence 57889999977764 44444443 22348999999999998888888764 35788 8999997432
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
..-++.|+++.+++.
T Consensus 78 ~~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 78 TFETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 112568999988764
No 324
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.66 E-value=1.2 Score=35.90 Aligned_cols=78 Identities=14% Similarity=0.121 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~~~~~~~~ 79 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD------GGTAI-SVAVDVSDPESAKAMADR 79 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc------CCcEE-EEEccCCCHHHHHHHHHH
Confidence 57789988865 455555555542 2348999999999888877777652 34688 89999975320
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 80 ~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 80 TLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 11358999998875
No 325
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=90.48 E-value=0.55 Score=40.65 Aligned_cols=47 Identities=23% Similarity=0.399 Sum_probs=38.2
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMTK 197 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~ 197 (254)
.++++++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGA-SIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHHc
Confidence 678999999999886 7777888887653 2699999999998887653
No 326
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=90.37 E-value=0.71 Score=39.72 Aligned_cols=46 Identities=22% Similarity=0.308 Sum_probs=37.1
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGA-AQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH
Confidence 688999999999875 7777778877542 279999999998887764
No 327
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.35 E-value=0.2 Score=47.31 Aligned_cols=86 Identities=12% Similarity=0.019 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC---------C--CCEEEEEeCCH---HHHHHHH-----------HHHHhhCCC---
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG---------D--KGHVTAVDHIP---QLINLFM-----------TKLKISYPK--- 204 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~---------~--~~~v~gvD~s~---~~l~~a~-----------~~~~~~~~~--- 204 (254)
+.-+|+|+|.|+|+..+.+.+... + ..+++++|..| +-+..+. +.+......
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 456999999999998877766531 1 24799999944 4443322 112221000
Q ss_pred ---c-ccCC--CeeEEEEcCCCCCCcC-----CCCccEEEecCcCc
Q psy425 205 ---L-YKLY--KIMDVVEWDARKPYKK-----NGPYDVIHFGSGVK 239 (254)
Q Consensus 205 ---~-~~~~--~v~~~~~~d~~~~~~~-----~~~fD~I~~~~~~~ 239 (254)
. +... .++ +..+|+.+..+. ...+|+++..+.-+
T Consensus 138 ~~r~~~~~~~~~l~-l~~gd~~~~l~~~~~~~~~~~da~flD~f~p 182 (689)
T 3pvc_A 138 CHRILLADGAITLD-LWFGDVNTLLPTLDDSLNNQVDAWFLDGFAP 182 (689)
T ss_dssp EEEEEETTTTEEEE-EEESCHHHHGGGCCGGGTTCEEEEEECSSCC
T ss_pred ceEEEecCCcEEEE-EEccCHHHHHhhcccccCCceeEEEECCCCC
Confidence 0 0011 456 788888643322 35799999987543
No 328
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=90.05 E-value=0.96 Score=43.38 Aligned_cols=45 Identities=24% Similarity=0.066 Sum_probs=34.9
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCCC----CEEEEEeCCHHHHHHHHHHH
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGDK----GHVTAVDHIPQLINLFMTKL 198 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~~----~~v~gvD~s~~~l~~a~~~~ 198 (254)
..+|||+.||.|.++.-|.+.++.. -.+.++|+++.+++--+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 4589999999999998887664210 14789999999988777774
No 329
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=90.01 E-value=0.46 Score=42.01 Aligned_cols=47 Identities=13% Similarity=0.063 Sum_probs=36.7
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCCCCE----EEEEeCCHHHHHHHHHHHHh
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGDKGH----VTAVDHIPQLINLFMTKLKI 200 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~~~~----v~gvD~s~~~l~~a~~~~~~ 200 (254)
.-+|+|+.||.|.++..+.+.+.+... |.++|+++.+++.-+.|...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 358999999999999998876521113 78899999998887777643
No 330
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.96 E-value=1.1 Score=34.33 Aligned_cols=68 Identities=16% Similarity=0.139 Sum_probs=41.5
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----c-CC
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD--KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----K-KN 226 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----~-~~ 226 (254)
+.+|+=+|+ |.++..+++.+.. ...|+++|.+++.++.+++. .+. ++.+|..... . ..
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~------------g~~-~~~gd~~~~~~l~~~~~~ 103 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE------------GRN-VISGDATDPDFWERILDT 103 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT------------TCC-EEECCTTCHHHHHTBCSC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC------------CCC-EEEcCCCCHHHHHhccCC
Confidence 568998886 4555555544321 12699999999877665431 355 6777765311 1 12
Q ss_pred CCccEEEecC
Q psy425 227 GPYDVIHFGS 236 (254)
Q Consensus 227 ~~fD~I~~~~ 236 (254)
..+|+|++..
T Consensus 104 ~~ad~vi~~~ 113 (183)
T 3c85_A 104 GHVKLVLLAM 113 (183)
T ss_dssp CCCCEEEECC
T ss_pred CCCCEEEEeC
Confidence 3489888754
No 331
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.92 E-value=0.77 Score=39.36 Aligned_cols=45 Identities=24% Similarity=0.404 Sum_probs=36.8
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. +|+++|.+++.++.+++
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGA--FVVCTARSPRRLEVAKN 210 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHH
Confidence 688999999999875 6777777777654 69999999998887764
No 332
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.85 E-value=0.56 Score=40.70 Aligned_cols=45 Identities=27% Similarity=0.331 Sum_probs=37.4
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+|+..+. +|++++.+++.++.+++
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga--~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA--HVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 678999999999975 7777778877654 79999999998888765
No 333
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.62 E-value=0.46 Score=40.72 Aligned_cols=45 Identities=24% Similarity=0.287 Sum_probs=37.7
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. +|++++.+++.++.+++
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA--EVSVFARNEHKKQDALS 218 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC--EEEEECSSSTTHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHh
Confidence 678999999999875 7777888887654 89999999998887765
No 334
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=89.57 E-value=1.5 Score=36.04 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.|+.+|=-|+++| ++..+++.+. ...+|+.+|.+++.++.+.+.+... ..++. ++.+|+.+..
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~------g~~~~-~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK------GYDAH-GVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT------TCCEE-ECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEE-EEEeeCCCHHHHHHHHHH
Confidence 5788888887765 4444454442 2348999999999988888777763 34788 8889987421
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 80 ~~~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 80 LDAEGIHVDILINNAGI 96 (255)
T ss_dssp HHHTTCCCCEEEECCCC
T ss_pred HHHHCCCCcEEEECCCC
Confidence 223568999998876
No 335
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.56 E-value=0.82 Score=39.93 Aligned_cols=46 Identities=26% Similarity=0.364 Sum_probs=37.5
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |.++..+|+..+. .+|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga-~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGA-AVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-CeEEEEcCCHHHHHHHHH
Confidence 678999999999876 7777888887643 269999999998888754
No 336
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.38 E-value=2.7 Score=30.08 Aligned_cols=71 Identities=14% Similarity=0.162 Sum_probs=42.6
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----cCCCC
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----KKNGP 228 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----~~~~~ 228 (254)
+.+|+=+|+ |.++..+++.+.. ..+|+.+|.+++.++..++. ..+. +..+|..... .....
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-----------~~~~-~~~~d~~~~~~l~~~~~~~ 69 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-----------IDAL-VINGDCTKIKTLEDAGIED 69 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------CSSE-EEESCTTSHHHHHHTTTTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-----------cCcE-EEEcCCCCHHHHHHcCccc
Confidence 457888876 6666666655422 23799999998876554332 1355 6677764211 11234
Q ss_pred ccEEEecCcC
Q psy425 229 YDVIHFGSGV 238 (254)
Q Consensus 229 fD~I~~~~~~ 238 (254)
+|+|++....
T Consensus 70 ~d~vi~~~~~ 79 (140)
T 1lss_A 70 ADMYIAVTGK 79 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEeeCC
Confidence 8998887543
No 337
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=88.98 E-value=1.8 Score=35.07 Aligned_cols=78 Identities=19% Similarity=0.233 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.++|=.|+++| ++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA------GGRIV-ARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT------TCEEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEE-EEECcCCCHHHHHHHHHH
Confidence 5678898887755 4545554442 2348999999999888887777663 34688 99999974210
Q ss_pred --CCCCccEEEecCcC
Q psy425 225 --KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 --~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 78 ~~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 78 ADAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHHSCEEEEEECCCC
T ss_pred HHhhCCceEEEECCCc
Confidence 01468999988876
No 338
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.84 E-value=2.6 Score=34.32 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.++++|=.|++.|. +..+++.+ ....+|+.++.+++.++.+.+.+... ..++. ++.+|+.+..
T Consensus 10 ~~k~vlVTGas~gI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 10 TDKVVVISGVGPAL-GTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT------GRRAL-SVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTCEEEEESCCTTH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCcHH-HHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc------CCcEE-EEEcCCCCHHHHHHHHHH
Confidence 67899999987664 44444433 22348999999999888877777663 35788 9999997432
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 82 ~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 82 TMKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHHTSCCSEEEECCCS
T ss_pred HHHHcCCCcEEEECCCC
Confidence 112468999988754
No 339
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.61 E-value=1.7 Score=35.33 Aligned_cols=79 Identities=23% Similarity=0.193 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-CCChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGF-GSGFMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~-G~G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.++++|=.|+ |+|.- ..+++.+ ....+|+.++.+++.++.+.+.+... ...++. ++.+|+.+...
T Consensus 21 ~~k~vlITGasg~GIG-~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~-~~~~Dl~~~~~v~~~~~ 93 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIG-STTARRALLEGADVVISDYHERRLGETRDQLADL-----GLGRVE-AVVCDVTSTEAVDALIT 93 (266)
T ss_dssp TTCEEEESSCSSSSHH-HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----CSSCEE-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchH-HHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-----CCCceE-EEEeCCCCHHHHHHHHH
Confidence 5788999887 56543 3333332 22347999999999888877777553 345788 99999974311
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 94 ~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 94 QTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHhCCCcEEEECCCc
Confidence 11358999999876
No 340
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.55 E-value=2.5 Score=34.50 Aligned_cols=68 Identities=10% Similarity=0.242 Sum_probs=49.6
Q ss_pred CEEEEEcCCCChHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCcCCCCccEEE
Q psy425 155 ANVLDLGFGSGFMSCCMARMVGDK-GHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIH 233 (254)
Q Consensus 155 ~~VLDiG~G~G~~t~~la~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~~~~~fD~I~ 233 (254)
++||=.| + |+++..+++.+... .+|++++.++....... . .+++ ++.+|+.+.. ...+|+|+
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~--------~~~~-~~~~D~~d~~--~~~~d~vi 68 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A--------SGAE-PLLWPGEEPS--LDGVTHLL 68 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H--------TTEE-EEESSSSCCC--CTTCCEEE
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h--------CCCe-EEEecccccc--cCCCCEEE
Confidence 5899999 4 99998888876333 38999999876543221 1 3688 9999998633 44589999
Q ss_pred ecCcCc
Q psy425 234 FGSGVK 239 (254)
Q Consensus 234 ~~~~~~ 239 (254)
...+..
T Consensus 69 ~~a~~~ 74 (286)
T 3ius_A 69 ISTAPD 74 (286)
T ss_dssp ECCCCB
T ss_pred ECCCcc
Confidence 887764
No 341
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=88.48 E-value=1.6 Score=36.15 Aligned_cols=80 Identities=15% Similarity=0.072 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC-Cc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP-YK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~-~~------ 224 (254)
.+.+||=.|++ |.++..+++.+. ...+|+.++.+++..+.+.+.+... ...++. ++.+|+.+. ..
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~-~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS-----NHENVV-FHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----TCCSEE-EEECCTTSCHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCceE-EEEccCCCcHHHHHHHHH
Confidence 56788888876 445555555442 2348999999998887777777653 235788 999999864 10
Q ss_pred ----CCCCccEEEecCcCc
Q psy425 225 ----KNGPYDVIHFGSGVK 239 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~~ 239 (254)
..++.|+++.+++..
T Consensus 84 ~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHSSCCEEEECCCCC
T ss_pred HHHHhCCCCCEEEECCccc
Confidence 123689999998764
No 342
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=88.44 E-value=0.89 Score=39.12 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=38.7
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMTK 197 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~ 197 (254)
.+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++.++.+++.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGA-CPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh
Confidence 688999999999875 7777888887654 1399999999999988875
No 343
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=88.42 E-value=1.2 Score=45.14 Aligned_cols=45 Identities=18% Similarity=0.085 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKL 198 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~ 198 (254)
...+++|+.||.|.++.-+.+.+.. -.+.++|+++.+++.-+.|.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~-~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGIS-ETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSE-EEEEEECCSHHHHHHHHHHC
T ss_pred CCceEEecccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhC
Confidence 3468999999999999988766421 14889999999888766663
No 344
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.32 E-value=2.5 Score=35.25 Aligned_cols=78 Identities=18% Similarity=0.156 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.+||=.|+++| ++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ------GFDAH-GVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCceE-EEEccCCCHHHHHHHHHH
Confidence 5788999998754 5555555442 2348999999999888887777663 34788 99999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 102 ~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCCc
Confidence 11368999998876
No 345
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=88.24 E-value=3 Score=34.31 Aligned_cols=78 Identities=14% Similarity=0.150 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 23 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dv~d~~~v~~~~~~ 94 (279)
T 3sju_A 23 RPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA------GHDVD-GSSCDVTSTDEVHAAVAA 94 (279)
T ss_dssp --CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEE-EEECCCCCHHHHHHHHHH
Confidence 5788999996654 5555555442 2348999999999888777776652 35788 99999974320
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 95 ~~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 95 AVERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHHCSCCEEEECCCC
T ss_pred HHHHcCCCcEEEECCCC
Confidence 12368999998876
No 346
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=88.16 E-value=2.9 Score=33.44 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.+||=.|+ +|.++..+++.+.. ..+|++++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~~~~~~~~ 81 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL------GGQAF-ACRCDITSEQELSALADF 81 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh------CCceE-EEEcCCCCHHHHHHHHHH
Confidence 4678887774 56777777766533 348999999988776666665542 34688 89999874221
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+++|+|+.+.+.
T Consensus 82 ~~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 82 AISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHHSSCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 01258999988765
No 347
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=88.16 E-value=3.2 Score=33.65 Aligned_cols=78 Identities=13% Similarity=0.130 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~~~~~~~~ 79 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK------GFKVE-ASVCDLSSRSERQELMNT 79 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEE-EEEcCCCCHHHHHHHHHH
Confidence 46789988865 555555555442 2348999999998777666655542 23678 88999874310
Q ss_pred ---CC-CCccEEEecCcC
Q psy425 225 ---KN-GPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~-~~fD~I~~~~~~ 238 (254)
.. +..|+++.+.+.
T Consensus 80 ~~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 80 VANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHHTTTCCCEEEECCCC
T ss_pred HHHHcCCCCCEEEECCCC
Confidence 01 468999998875
No 348
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.94 E-value=1.1 Score=39.65 Aligned_cols=69 Identities=20% Similarity=0.203 Sum_probs=45.3
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----cCCCC
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----KKNGP 228 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----~~~~~ 228 (254)
..+|+=+|+ |.++..+++.+.. .-.|+.+|.+++.++.+++. .+. ++.+|+.... ..-..
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~------------g~~-vi~GDat~~~~L~~agi~~ 68 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF------------GMK-VFYGDATRMDLLESAGAAK 68 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT------------TCC-CEESCTTCHHHHHHTTTTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC------------CCe-EEEcCCCCHHHHHhcCCCc
Confidence 456888877 5666666665422 22699999999998877632 355 7889987431 11234
Q ss_pred ccEEEecCc
Q psy425 229 YDVIHFGSG 237 (254)
Q Consensus 229 fD~I~~~~~ 237 (254)
.|+|++...
T Consensus 69 A~~viv~~~ 77 (413)
T 3l9w_A 69 AEVLINAID 77 (413)
T ss_dssp CSEEEECCS
T ss_pred cCEEEECCC
Confidence 788877653
No 349
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=87.90 E-value=2.6 Score=34.28 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.+||=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA------GGEAE-SHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCEEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh------CCcee-EEEecCCCHHHHHHHHHH
Confidence 57889988865 556655655542 2348999999999888877777663 34688 99999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 100 ~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 11358999988775
No 350
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=87.75 E-value=3.3 Score=34.20 Aligned_cols=78 Identities=21% Similarity=0.240 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.++|=.|+++| ++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dv~d~~~v~~~~~~ 98 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGA------GGQAI-ALEADVSDELQMRNAVRD 98 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEE-EEEccCCCHHHHHHHHHH
Confidence 5778998987654 5555555442 2348999999998887777766542 34788 99999974310
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 99 ~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 99 LVLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 12368999988775
No 351
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=87.73 E-value=1.4 Score=36.04 Aligned_cols=80 Identities=9% Similarity=0.033 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCC-hHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-------
Q psy425 153 PGANVLDLGFGSG-FMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G-~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~------- 223 (254)
.|+++|=-|++++ .++..+|+.+. ...+|+.++.+++.++.+.+.+.+. ...++. ++.+|+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL-----NQPEAH-LYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG-----TCSSCE-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCCcEE-EEEccCCCHHHHHHHHH
Confidence 5889999996542 24444444332 2237999999999888888777663 345788 8999987421
Q ss_pred ---cCCCCccEEEecCcC
Q psy425 224 ---KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 ---~~~~~fD~I~~~~~~ 238 (254)
...+..|.++.+.++
T Consensus 79 ~~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp HHHHHHCCCSEEEECCCC
T ss_pred HHHHHhCCCCEEEecccc
Confidence 113568999988765
No 352
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=87.65 E-value=3.2 Score=33.32 Aligned_cols=78 Identities=12% Similarity=0.117 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-----C-
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-----K- 225 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-----~- 225 (254)
.+.+||=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+... ..++. ++.+|+.+... .
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~D~~~~~~~~~~~~~ 83 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME------GHDVS-SVVMDVTNTESVQNAVRS 83 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceE-EEEecCCCHHHHHHHHHH
Confidence 46788988864 566666666542 2348999999988776666655542 34688 99999974321 0
Q ss_pred ----CCCccEEEecCcC
Q psy425 226 ----NGPYDVIHFGSGV 238 (254)
Q Consensus 226 ----~~~fD~I~~~~~~ 238 (254)
.+++|+|+.+.+.
T Consensus 84 ~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 84 VHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 1358999988765
No 353
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=87.42 E-value=2.8 Score=33.56 Aligned_cols=78 Identities=13% Similarity=0.067 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.++++|=.|++ |.++..+++.+.. ..+|+.++.+++.++...+.+... ..++. ++.+|+.+..
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK------GFKAR-GLVLNISDIESIQNFFAE 75 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceE-EEEecCCCHHHHHHHHHH
Confidence 46788888865 5555555554422 348999999999888877777663 34788 9999997421
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 76 ~~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 76 IKAENLAIDILVNNAGI 92 (247)
T ss_dssp HHHTTCCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 112458999998876
No 354
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=87.37 E-value=4.9 Score=32.65 Aligned_cols=80 Identities=11% Similarity=0.086 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++.+.+.+.... ...++. ++.+|+.+...
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~-~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF----PGARLF-ASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS----TTCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc----CCceEE-EEeCCCCCHHHHHHHHHH
Confidence 5778898887655 4544554432 23479999999998887777766521 233588 89999974210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 81 ~~~~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQ 97 (265)
T ss_dssp HHHHHCSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 12468999998876
No 355
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=87.26 E-value=0.92 Score=39.11 Aligned_cols=45 Identities=18% Similarity=0.286 Sum_probs=37.4
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. +|++++.+++.++.+++
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGA--EVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEecCchhHHHHHH
Confidence 678999999999875 7777788887655 89999999998888765
No 356
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=87.17 E-value=3.3 Score=33.55 Aligned_cols=75 Identities=17% Similarity=0.233 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++...+.+. .++. ++.+|+.+...
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~-~~~~Dv~~~~~v~~~~~~ 75 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---------PRVH-ALRSDIADLNEIAVLGAA 75 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------Ccce-EEEccCCCHHHHHHHHHH
Confidence 5788999997654 5555555442 23489999999987766655442 2678 89999874321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 76 ~~~~~g~id~lv~nAg~ 92 (255)
T 4eso_A 76 AGQTLGAIDLLHINAGV 92 (255)
T ss_dssp HHHHHSSEEEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 12368999988776
No 357
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=87.11 E-value=2.4 Score=34.74 Aligned_cols=78 Identities=10% Similarity=0.047 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~~~~~~~~ 91 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK------GLNVE-GSVCDLLSRTERDKLMQT 91 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceE-EEECCCCCHHHHHHHHHH
Confidence 46789988865 555555555542 2348999999998777666665542 24688 89999874310
Q ss_pred ---CC-CCccEEEecCcC
Q psy425 225 ---KN-GPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~-~~fD~I~~~~~~ 238 (254)
.. +..|+++.+.+.
T Consensus 92 ~~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 92 VAHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHHTTSCCCEEEECCCC
T ss_pred HHHHcCCCCcEEEECCCC
Confidence 01 568999998875
No 358
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.06 E-value=2.8 Score=35.38 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.+.+||=.|+++| ++..+++.+ ....+|++++.+++.++.+.+.+...+ ...++. ++.+|+.+..
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~----~~~~~~-~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG----SGPEVM-GVQLDVASREGFKMAADE 80 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT----CGGGEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CCCeEE-EEECCCCCHHHHHHHHHH
Confidence 4678999997755 444445443 223489999999998888777776532 123688 9999997421
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...+..|+++.+.+.
T Consensus 81 ~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 81 VEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHTCCEEEEEECCCC
T ss_pred HHHhCCCCCEEEECCCc
Confidence 012468999999875
No 359
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=87.00 E-value=0.99 Score=38.68 Aligned_cols=47 Identities=26% Similarity=0.403 Sum_probs=37.3
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMTK 197 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~ 197 (254)
.+++|++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++.
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGA-GRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTC-SSEEEECCCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEECCCHHHHHHHHHh
Confidence 688999999999875 6777777776542 2699999999988887664
No 360
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.93 E-value=2.8 Score=30.98 Aligned_cols=73 Identities=12% Similarity=0.054 Sum_probs=44.4
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCC-HHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----cCCC
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHI-PQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----KKNG 227 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----~~~~ 227 (254)
..+|+=+|+ |..+..+++.+.. ...|+.+|.+ ++.++...+.. ...+. ++.+|..+.. ..-.
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---------~~~~~-~i~gd~~~~~~l~~a~i~ 70 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---------GDNAD-VIPGDSNDSSVLKKAGID 70 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---------CTTCE-EEESCTTSHHHHHHHTTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---------cCCCe-EEEcCCCCHHHHHHcChh
Confidence 456777775 7777777665422 2369999997 45544443332 12577 8999987421 1123
Q ss_pred CccEEEecCcC
Q psy425 228 PYDVIHFGSGV 238 (254)
Q Consensus 228 ~fD~I~~~~~~ 238 (254)
..|+|++...-
T Consensus 71 ~ad~vi~~~~~ 81 (153)
T 1id1_A 71 RCRAILALSDN 81 (153)
T ss_dssp TCSEEEECSSC
T ss_pred hCCEEEEecCC
Confidence 57888877543
No 361
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=86.73 E-value=4.9 Score=32.71 Aligned_cols=79 Identities=18% Similarity=0.159 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++.+.+.+... ...++. ++.+|+.+...
T Consensus 19 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~-~~~~Dv~~~~~v~~~~~~ 91 (266)
T 4egf_A 19 DGKRALITGATKG-IGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ-----FGTDVH-TVAIDLAEPDAPAELARR 91 (266)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----HCCCEE-EEECCTTSTTHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----cCCcEE-EEEecCCCHHHHHHHHHH
Confidence 5678888887654 5555555442 2348999999998888777666542 234788 99999985431
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 92 ~~~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 92 AAEAFGGLDVLVNNAGI 108 (266)
T ss_dssp HHHHHTSCSEEEEECCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 11368999988776
No 362
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=86.47 E-value=1.3 Score=37.80 Aligned_cols=46 Identities=28% Similarity=0.375 Sum_probs=37.5
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.++++++||-+|+|. |..+..+++..+ ..+|+++|.+++.++.+++
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE 214 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH
Confidence 578999999999975 777788887762 2489999999998888765
No 363
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=86.41 E-value=2.4 Score=36.08 Aligned_cols=45 Identities=29% Similarity=0.339 Sum_probs=36.1
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.++++++||-+|+|. |..+..+++..+. +|++++.+++.++.+++
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL--NVVAVDIGDEKLELAKE 206 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH
Confidence 678999999999963 6666777776554 89999999998887754
No 364
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.41 E-value=3.7 Score=33.55 Aligned_cols=79 Identities=18% Similarity=0.175 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCC------------HHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHI------------PQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
.++++|=.|++. .++..+++.+. ...+|+.+|.+ ++.++...+.+... ..++. ++.+|+
T Consensus 12 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~D~ 83 (278)
T 3sx2_A 12 TGKVAFITGAAR-GQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI------GSRIV-ARQADV 83 (278)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH------TCCEE-EEECCT
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc------CCeEE-EEeCCC
Confidence 578899998654 45555555442 23479999987 66666666655553 35788 999999
Q ss_pred CCCCc----------CCCCccEEEecCcCc
Q psy425 220 RKPYK----------KNGPYDVIHFGSGVK 239 (254)
Q Consensus 220 ~~~~~----------~~~~fD~I~~~~~~~ 239 (254)
.+... ..++.|+++.+.+..
T Consensus 84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 84 RDRESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 74310 113689999998764
No 365
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=86.38 E-value=1.2 Score=38.41 Aligned_cols=45 Identities=20% Similarity=0.280 Sum_probs=37.1
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. +|++++.+++.++.+++
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga--~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGA--ETYVISRSSRKREDAMK 221 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHH
Confidence 678999999999864 6777777777655 79999999998888765
No 366
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.35 E-value=3.1 Score=33.84 Aligned_cols=79 Identities=19% Similarity=0.166 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+... ...++. ++.+|+.+...
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~-~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL-----GSGKVI-GVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----SSSCEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-----CCCcEE-EEEcCCCCHHHHHHHHHH
Confidence 46788888865 455555555542 2338999999999888777776653 235788 99999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 82 ~~~~~g~id~lvnnAg~ 98 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGV 98 (262)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 11358999988775
No 367
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=86.29 E-value=2.5 Score=34.85 Aligned_cols=78 Identities=15% Similarity=0.215 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 31 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 31 SGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV------GGKAL-PIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT------TCCCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEE-EEEcCCCCHHHHHHHHHH
Confidence 5788998887654 4555555442 2348999999998887777776653 34788 89999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 103 ~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 103 MTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11368999998876
No 368
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=86.25 E-value=6.5 Score=32.52 Aligned_cols=80 Identities=13% Similarity=0.121 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc----CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-----
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV----GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~----~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----- 223 (254)
.++++|=.|+++| ++..+++.+ ....+|+.++.+++.++.+.+.+.... ...++. ++.+|+.+..
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~-~~~~Dv~d~~~v~~~ 105 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF----PNAKVH-VAQLDITQAEKIKPF 105 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC----TTCEEE-EEECCTTCGGGHHHH
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC----CCCeEE-EEECCCCCHHHHHHH
Confidence 5789999997654 444444443 211279999999998888777766531 134688 8999997432
Q ss_pred -----cCCCCccEEEecCcC
Q psy425 224 -----KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 -----~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 106 ~~~~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 106 IENLPQEFKDIDILVNNAGK 125 (287)
T ss_dssp HHTSCGGGCSCCEEEECCCC
T ss_pred HHHHHHhcCCCCEEEECCCc
Confidence 112468999998875
No 369
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=86.23 E-value=3.6 Score=33.30 Aligned_cols=78 Identities=14% Similarity=0.121 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++.| ++..+++.+. ...+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 11 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 11 NDAVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA------GGKAI-GLECNVTDEQHREAVIKA 82 (256)
T ss_dssp TTCEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEE-EEECCCCCHHHHHHHHHH
Confidence 5678888887655 4444444432 2237999999998888777777653 35788 99999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 83 ~~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11368999998876
No 370
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.18 E-value=5.3 Score=32.70 Aligned_cols=78 Identities=19% Similarity=0.182 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeC-------------CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDH-------------IPQLINLFMTKLKISYPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d 218 (254)
.++++|=.|+++| ++..+++.+. ...+|+.+|. +++.++.+.+.+... ..++. ++.+|
T Consensus 14 ~gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~D 85 (280)
T 3pgx_A 14 QGRVAFITGAARG-QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ------GRKAL-TRVLD 85 (280)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT------TCCEE-EEECC
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc------CCeEE-EEEcC
Confidence 5788999987655 4444554432 2347999998 677777766666552 35788 89999
Q ss_pred CCCCCc----------CCCCccEEEecCcC
Q psy425 219 ARKPYK----------KNGPYDVIHFGSGV 238 (254)
Q Consensus 219 ~~~~~~----------~~~~fD~I~~~~~~ 238 (254)
+.+... ..++.|+++.+.+.
T Consensus 86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 86 VRDDAALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 974210 12368999998876
No 371
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=86.17 E-value=3.3 Score=36.25 Aligned_cols=86 Identities=17% Similarity=0.128 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCC-EEEEEeCCHH---HHHHHHHHHHhhCCC---cccCCCeeEEEEcCCCCCC--
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKG-HVTAVDHIPQ---LINLFMTKLKISYPK---LYKLYKIMDVVEWDARKPY-- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~-~v~gvD~s~~---~l~~a~~~~~~~~~~---~~~~~~v~~~~~~d~~~~~-- 223 (254)
++.+||=.|+ +|+++..+++.+...+ +|++++.++. ..+...+.+...... .....++. ++.+|+.+..
T Consensus 68 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~-~v~~Dl~d~~~l 145 (427)
T 4f6c_A 68 PLGNTLLTGA-TGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIE-VIVGDFECMDDV 145 (427)
T ss_dssp CCEEEEEECT-TSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEE-EEEECC---CCC
T ss_pred CCCEEEEecC-CcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceE-EEeCCCCCcccC
Confidence 3558888884 6888888887764433 7999988876 444444433321000 00135799 9999997521
Q ss_pred cCCCCccEEEecCcCcC
Q psy425 224 KKNGPYDVIHFGSGVKH 240 (254)
Q Consensus 224 ~~~~~fD~I~~~~~~~~ 240 (254)
.....+|+|+.+++..+
T Consensus 146 ~~~~~~d~Vih~A~~~~ 162 (427)
T 4f6c_A 146 VLPENMDTIIHAGARTD 162 (427)
T ss_dssp CCSSCCSEEEECCCCC-
T ss_pred CCcCCCCEEEECCcccC
Confidence 12345899998887643
No 372
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.10 E-value=4.2 Score=33.25 Aligned_cols=79 Identities=18% Similarity=0.127 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCC------------HHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHI------------PQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
.++++|=.|+++| ++..+++.+. ...+|+.+|.+ .+.++.+...+... ..++. ++.+|+
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~D~ 80 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT------GRKAY-TAEVDV 80 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT------TSCEE-EEECCT
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc------CCceE-EEEccC
Confidence 5778998887654 4545555442 23489999987 66666666665552 35788 999999
Q ss_pred CCCCc----------CCCCccEEEecCcCc
Q psy425 220 RKPYK----------KNGPYDVIHFGSGVK 239 (254)
Q Consensus 220 ~~~~~----------~~~~fD~I~~~~~~~ 239 (254)
.+... ..++.|+++.+.+..
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 110 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGIC 110 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 74321 113689999988763
No 373
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=86.10 E-value=3 Score=33.53 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dv~~~~~~~~~~~~ 77 (247)
T 2jah_A 6 QGKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA------GAKVH-VLELDVADRQGVDAAVAS 77 (247)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEE-EEECCCCCHHHHHHHHHH
Confidence 46788988865 555555555542 2337999999998877766666542 24688 89999874311
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 78 ~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 78 TVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11358999988765
No 374
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=85.73 E-value=3.6 Score=33.78 Aligned_cols=78 Identities=14% Similarity=0.092 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++ .++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 32 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~~~~~~~~~~~~ 103 (275)
T 4imr_A 32 RGRTALVTGSSR-GIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS------GGTAQ-ELAGDLSEAGAGTDLIER 103 (275)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT------TCCEE-EEECCTTSTTHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc------CCeEE-EEEecCCCHHHHHHHHHH
Confidence 578888888654 45555555442 2348999999988877777766652 35788 99999975321
Q ss_pred --CCCCccEEEecCcC
Q psy425 225 --KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 --~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+++.
T Consensus 104 ~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 104 AEAIAPVDILVINASA 119 (275)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 11468999998875
No 375
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.63 E-value=4.1 Score=33.13 Aligned_cols=80 Identities=15% Similarity=0.111 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC------cC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY------KK 225 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~------~~ 225 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+...+ ....+. ++.+|+.+.. ..
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~-~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY----PDAILQ-PVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC----TTCEEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC----CCceEE-EEecCCCCHHHHHHHHHh
Confidence 46788888865 455555555442 23489999999988877777666532 134577 8889987421 12
Q ss_pred CCCccEEEecCcC
Q psy425 226 NGPYDVIHFGSGV 238 (254)
Q Consensus 226 ~~~fD~I~~~~~~ 238 (254)
.++.|+++.+.+.
T Consensus 83 ~g~id~lv~nAg~ 95 (267)
T 3t4x_A 83 YPKVDILINNLGI 95 (267)
T ss_dssp CCCCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 3468999998876
No 376
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=85.63 E-value=2 Score=37.14 Aligned_cols=47 Identities=23% Similarity=0.278 Sum_probs=37.8
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMTK 197 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~ 197 (254)
.+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++.++.+++.
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGA-TTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHc
Confidence 688999999999875 6777777777543 3799999999988887663
No 377
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=85.48 E-value=3.8 Score=33.01 Aligned_cols=78 Identities=15% Similarity=0.085 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD--KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.+.+||=.| |+|.++..+++.+.. ..+|+.++.+++..+.+.+.+... ..++. ++.+|+.+...
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dl~~~~~~~~~~~ 74 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE------GLSPR-FHQLDIDDLQSIRALRD 74 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT------TCCCE-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc------CCeeE-EEECCCCCHHHHHHHHH
Confidence 466788777 557777777665433 348999999988777766666552 24688 99999874211
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..+.+|+|+.+.+.
T Consensus 75 ~~~~~~g~id~li~~Ag~ 92 (276)
T 1wma_A 75 FLRKEYGGLDVLVNNAGI 92 (276)
T ss_dssp HHHHHHSSEEEEEECCCC
T ss_pred HHHHhcCCCCEEEECCcc
Confidence 01258999988765
No 378
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=85.41 E-value=7.5 Score=32.06 Aligned_cols=63 Identities=13% Similarity=0.002 Sum_probs=42.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEe-CCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVD-HIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP 222 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD-~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~ 222 (254)
.+.++|=.|++ |.++..+++.+. ...+|+.++ .+++.++.+.+.+... ...++. ++.+|+.+.
T Consensus 8 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~-----~~~~~~-~~~~Dl~~~ 72 (291)
T 1e7w_A 8 TVPVALVTGAA-KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR-----RPNSAI-TVQADLSNV 72 (291)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-----STTCEE-EEECCCSSS
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhh-----cCCeeE-EEEeecCCc
Confidence 46788888765 455666665542 234799999 9988877776666521 124688 899998754
No 379
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=85.36 E-value=2.7 Score=34.07 Aligned_cols=78 Identities=17% Similarity=0.103 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 5 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~~~~~v~~~~~~ 76 (257)
T 3imf_A 5 KEKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF------PGQIL-TVQMDVRNTDDIQKMIEQ 76 (257)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS------TTCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEE-EEEccCCCHHHHHHHHHH
Confidence 46788888865 445555555442 2348999999999888777766542 34788 99999974310
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 77 ~~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 77 IDEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11358999988774
No 380
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=85.24 E-value=4.5 Score=32.82 Aligned_cols=80 Identities=14% Similarity=0.086 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+.... ...++. ++.+|+.+...
T Consensus 12 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~-~~~~D~~~~~~v~~~~~~ 85 (267)
T 1iy8_A 12 TDRVVLITGGG-SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA----PDAEVL-TTVADVSDEAQVEAYVTA 85 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC----TTCCEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc----CCceEE-EEEccCCCHHHHHHHHHH
Confidence 46789988865 555555555442 23489999999987776666554420 134688 89999874321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 86 ~~~~~g~id~lv~nAg~ 102 (267)
T 1iy8_A 86 TTERFGRIDGFFNNAGI 102 (267)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 11358999988765
No 381
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=85.19 E-value=1.7 Score=37.68 Aligned_cols=46 Identities=24% Similarity=0.411 Sum_probs=36.1
Q ss_pred c-CCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 K-LLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~-~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
. +++|++||-+|+|. |..+..+|+..+. .+|++++.+++.++.+++
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 191 PESFAGKTVVIQGAGPLGLFGVVIARSLGA-ENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp SSCCBTCEEEEECCSHHHHHHHHHHHHTTB-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHHcCC-ceEEEEcCCHHHHHHHHH
Confidence 5 78899999999764 6677777777541 389999999998887764
No 382
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=85.02 E-value=2.7 Score=34.37 Aligned_cols=78 Identities=19% Similarity=0.054 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.+||=.|++ |.++..+++.+. ...+|++++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dl~~~~~v~~~~~~ 101 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL------GAKVH-TFVVDCSNREDIYSSAKK 101 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc------CCeEE-EEEeeCCCHHHHHHHHHH
Confidence 46788988865 566666666542 2348999999998877766666552 24788 99999874210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+.+|+|+.+.+.
T Consensus 102 ~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 102 VKAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHHTCCCSEEEECCCC
T ss_pred HHHHCCCCcEEEECCCc
Confidence 12358999988876
No 383
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=84.97 E-value=2.3 Score=34.87 Aligned_cols=78 Identities=17% Similarity=0.114 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+ ....+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 3 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dv~d~~~v~~~~~~ 74 (264)
T 3tfo_A 3 MDKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDA------GGTAL-AQVLDVTDRHSVAAFAQA 74 (264)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCEEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEE-EEEcCCCCHHHHHHHHHH
Confidence 4567888887654 455555544 22348999999999888877777663 34677 88899874210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 75 ~~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 75 AVDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 12358999988776
No 384
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=84.80 E-value=1.4 Score=37.58 Aligned_cols=44 Identities=9% Similarity=0.189 Sum_probs=36.3
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHc--CCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMV--GDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~--~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+ +|++||-+|+|. |..+..+++.. +. +|++++.+++.++.+++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga--~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI--TIVGISRSKKHRDFALE 214 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC--EEEEEeCCHHHHHHHHH
Confidence 56 899999999974 66777788876 54 79999999998888765
No 385
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=84.76 E-value=4.4 Score=33.64 Aligned_cols=75 Identities=13% Similarity=0.138 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.|+.+|=-|+++| ++..+++.+. ...+|+.+|.+++.++.+.+.+ ..++. .+.+|+.+..
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---------g~~~~-~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---------GGGAV-GIQADSANLAELDRLYEK 96 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---------CTTCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---------CCCeE-EEEecCCCHHHHHHHHHH
Confidence 6889999998776 4444444442 2348999999999877665443 23567 8889987421
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 97 ~~~~~G~iDiLVNNAG~ 113 (273)
T 4fgs_A 97 VKAEAGRIDVLFVNAGG 113 (273)
T ss_dssp HHHHHSCEEEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 113568999888765
No 386
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=84.75 E-value=1.2 Score=38.47 Aligned_cols=45 Identities=24% Similarity=0.417 Sum_probs=34.2
Q ss_pred cCC-CCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLL-PGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~-~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+. +|++||-+|+|. |..+..+++..+. +|++++.+++.++.+++
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~ 229 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS--KVTVISTSPSKKEEALK 229 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCGGGHHHHHH
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 566 899999999764 5566666766554 89999999987776653
No 387
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=84.72 E-value=1.4 Score=38.10 Aligned_cols=46 Identities=20% Similarity=0.377 Sum_probs=36.6
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++.++.+++
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHH
Confidence 678999999999875 6777777777643 269999999998887764
No 388
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=84.64 E-value=4.4 Score=33.40 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+... ....+. ++.+|+.+...
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~Dv~d~~~v~~~~~~ 104 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR-----TGNIVR-AVVCDVGDPDQVAALFAA 104 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----HSSCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCCeEE-EEEcCCCCHHHHHHHHHH
Confidence 57788888865 455555555542 2348999999998887777766553 233468 89999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 105 ~~~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 105 VRAEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11358999998876
No 389
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=84.61 E-value=4.7 Score=33.02 Aligned_cols=78 Identities=18% Similarity=0.125 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dv~~~~~v~~~~~~ 92 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA------GVEAD-GRTCDVRSVPEIEALVAA 92 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceE-EEECCCCCHHHHHHHHHH
Confidence 46789988875 555555555442 2348999999998777666666542 24688 89999874210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+.+|+++.+.+.
T Consensus 93 ~~~~~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 93 VVERYGPVDVLVNNAGR 109 (277)
T ss_dssp HHHHTCSCSEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 12358999988765
No 390
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=84.59 E-value=5.4 Score=32.64 Aligned_cols=81 Identities=16% Similarity=0.000 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++. .++..+++.+. ...+|+.++.+++.++.+.+.+...+. ...++. ++.+|+.+...
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~-~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 10 QDRTYLVTGGGS-GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA---NGGAIR-YEPTDITNEDETARAVDA 84 (281)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC---SSCEEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC---CCceEE-EEeCCCCCHHHHHHHHHH
Confidence 577899888754 45555555442 234899999999988887777765320 112688 89999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 85 ~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 11358999988775
No 391
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=84.51 E-value=2.6 Score=36.12 Aligned_cols=45 Identities=27% Similarity=0.416 Sum_probs=35.9
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMV-GDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+|+.. +. +|+++|.+++.++.+++
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga--~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPA--TVIALDVKEEKLKLAER 229 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEeCCHHHHHHHHH
Confidence 678999999999863 55666777776 54 89999999998887764
No 392
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=84.51 E-value=0.89 Score=38.77 Aligned_cols=45 Identities=13% Similarity=0.158 Sum_probs=37.2
Q ss_pred cCCCCCEEEEEcCC--CChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFG--SGFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G--~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+| .|..+..+++..+. +|++++.+++.++.+++
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNF--RLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 67899999999997 46777777877655 89999999998888765
No 393
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=84.50 E-value=5.3 Score=31.76 Aligned_cols=69 Identities=7% Similarity=-0.064 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----cCCCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----KKNGP 228 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----~~~~~ 228 (254)
...+|+=+|+ |..+..+++.+...+.|+.+|.+++.++.++ . .+. ++.+|..+.. ..-..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~----~---------~~~-~i~gd~~~~~~l~~a~i~~ 71 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR----S---------GAN-FVHGDPTRVSDLEKANVRG 71 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH----T---------TCE-EEESCTTCHHHHHHTTCTT
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh----c---------CCe-EEEcCCCCHHHHHhcCcch
Confidence 4568888887 6888888888755444999999998765543 2 467 8899987421 11234
Q ss_pred ccEEEecCc
Q psy425 229 YDVIHFGSG 237 (254)
Q Consensus 229 fD~I~~~~~ 237 (254)
.|.|++...
T Consensus 72 ad~vi~~~~ 80 (234)
T 2aef_A 72 ARAVIVDLE 80 (234)
T ss_dssp CSEEEECCS
T ss_pred hcEEEEcCC
Confidence 788887643
No 394
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=84.35 E-value=3.8 Score=28.27 Aligned_cols=71 Identities=18% Similarity=0.181 Sum_probs=45.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCC--CEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC---cCCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDK--GHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY---KKNG 227 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~---~~~~ 227 (254)
.+.+|+=+|+ |.++..+++.+... .+|+++|.+++.++.+. . ..+. +...|+.... ..-.
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--------~~~~-~~~~d~~~~~~~~~~~~ 68 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--------MGVA-TKQVDAKDEAGLAKALG 68 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--------TTCE-EEECCTTCHHHHHHHTT
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--------CCCc-EEEecCCCHHHHHHHHc
Confidence 3568999998 67776666554222 37999999988765543 2 2466 7778876321 0113
Q ss_pred CccEEEecCcC
Q psy425 228 PYDVIHFGSGV 238 (254)
Q Consensus 228 ~fD~I~~~~~~ 238 (254)
.+|+|+.....
T Consensus 69 ~~d~vi~~~~~ 79 (118)
T 3ic5_A 69 GFDAVISAAPF 79 (118)
T ss_dssp TCSEEEECSCG
T ss_pred CCCEEEECCCc
Confidence 48999887654
No 395
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=84.34 E-value=9.4 Score=31.13 Aligned_cols=76 Identities=13% Similarity=0.171 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-----cCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-----KKN 226 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-----~~~ 226 (254)
.|+.+|=-|.++|. +..+++.+. ...+|+..|.+.. +.+.+.+.+. ..++. ++.+|+.+.. ...
T Consensus 8 ~GKvalVTGas~GI-G~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~------g~~~~-~~~~Dv~d~~~v~~~~~~ 77 (247)
T 4hp8_A 8 EGRKALVTGANTGL-GQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD------GGNAS-ALLIDFADPLAAKDSFTD 77 (247)
T ss_dssp TTCEEEETTTTSHH-HHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT------TCCEE-EEECCTTSTTTTTTSSTT
T ss_pred CCCEEEEeCcCCHH-HHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh------CCcEE-EEEccCCCHHHHHHHHHh
Confidence 57888888877764 344444432 2347999998753 2333444442 34688 8899987432 234
Q ss_pred CCccEEEecCcC
Q psy425 227 GPYDVIHFGSGV 238 (254)
Q Consensus 227 ~~fD~I~~~~~~ 238 (254)
++.|+++.+...
T Consensus 78 g~iDiLVNNAGi 89 (247)
T 4hp8_A 78 AGFDILVNNAGI 89 (247)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 568999988876
No 396
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=84.33 E-value=6 Score=32.17 Aligned_cols=79 Identities=10% Similarity=-0.013 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeC-CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC----Cc--
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDH-IPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP----YK-- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~----~~-- 224 (254)
.+.++|=.|++ |.++..+++.+.. ..+|+.++. +++.++.+.+.+... ...++. ++.+|+.+. ..
T Consensus 10 ~~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~-~~~~Dl~~~~~~~~~~~ 82 (276)
T 1mxh_A 10 ECPAAVITGGA-RRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA-----RAGSAV-LCKGDLSLSSSLLDCCE 82 (276)
T ss_dssp -CCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-----STTCEE-EEECCCSSSTTHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh-----cCCceE-EEeccCCCccccHHHHH
Confidence 46778877765 5566666655422 348999999 888777666665542 124688 899999864 10
Q ss_pred --------CCCCccEEEecCcC
Q psy425 225 --------KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 --------~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 83 ~~~~~~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 83 DIIDCSFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCC
Confidence 01258999998875
No 397
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=84.33 E-value=2.5 Score=33.95 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=50.8
Q ss_pred CCCCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC------
Q psy425 151 LLPGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY------ 223 (254)
Q Consensus 151 ~~~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~------ 223 (254)
..++.+||=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+. .++. +..+|+.+..
T Consensus 11 ~~~~k~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~-~~~~D~~~~~~~~~~~ 79 (249)
T 3f9i_A 11 DLTGKTSLITGAS-SGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---------DNYT-IEVCNLANKEECSNLI 79 (249)
T ss_dssp CCTTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------SSEE-EEECCTTSHHHHHHHH
T ss_pred cCCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---------cCcc-EEEcCCCCHHHHHHHH
Confidence 3467889988875 445555555442 23489999999887766555432 3688 8899987421
Q ss_pred cCCCCccEEEecCcC
Q psy425 224 KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 ~~~~~fD~I~~~~~~ 238 (254)
...+..|+++.+.+.
T Consensus 80 ~~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 80 SKTSNLDILVCNAGI 94 (249)
T ss_dssp HTCSCCSEEEECCC-
T ss_pred HhcCCCCEEEECCCC
Confidence 122458999998876
No 398
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.27 E-value=0.82 Score=34.17 Aligned_cols=85 Identities=14% Similarity=0.063 Sum_probs=47.1
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----cCC
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----KKN 226 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----~~~ 226 (254)
.++.+|+=+|+ |.++..+++.+.. ..+|+++|.+++.++.+++ . ..+. ++.+|..... ...
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~--------~g~~-~~~~d~~~~~~l~~~~~ 82 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E--------FSGF-TVVGDAAEFETLKECGM 82 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T--------CCSE-EEESCTTSHHHHHTTTG
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c--------CCCc-EEEecCCCHHHHHHcCc
Confidence 46789999987 5555555554322 2379999999876543221 1 2355 6667754211 112
Q ss_pred CCccEEEecCcCcCchHHHHHHHH
Q psy425 227 GPYDVIHFGSGVKHIPIEVSKLCR 250 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~~~~l~~~lr 250 (254)
..+|+|+....-........+.++
T Consensus 83 ~~ad~Vi~~~~~~~~~~~~~~~~~ 106 (155)
T 2g1u_A 83 EKADMVFAFTNDDSTNFFISMNAR 106 (155)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHHH
T ss_pred ccCCEEEEEeCCcHHHHHHHHHHH
Confidence 348998887554333333333333
No 399
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=84.15 E-value=1.6 Score=37.75 Aligned_cols=46 Identities=24% Similarity=0.387 Sum_probs=36.2
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGA-KRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH
Confidence 678999999999864 6677777777542 269999999998887764
No 400
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=83.95 E-value=13 Score=30.39 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=48.5
Q ss_pred CEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----------
Q psy425 155 ANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY---------- 223 (254)
Q Consensus 155 ~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~---------- 223 (254)
+++|=.|++.| ++..+++.+. ...+|+.++.+++.++...+.+.. . .++. ++.+|+.+..
T Consensus 22 k~vlVTGas~g-IG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~------~-~~~~-~~~~Dv~d~~~v~~~~~~~~ 92 (272)
T 2nwq_A 22 STLFITGATSG-FGEACARRFAEAGWSLVLTGRREERLQALAGELSA------K-TRVL-PLTLDVRDRAAMSAAVDNLP 92 (272)
T ss_dssp CEEEESSTTTS-SHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT------T-SCEE-EEECCTTCHHHHHHHHHTCC
T ss_pred cEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc------C-CcEE-EEEcCCCCHHHHHHHHHHHH
Confidence 67888887655 4444444432 234799999998877665554432 1 4688 8999987421
Q ss_pred cCCCCccEEEecCcC
Q psy425 224 KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 ~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 93 ~~~g~iD~lvnnAG~ 107 (272)
T 2nwq_A 93 EEFATLRGLINNAGL 107 (272)
T ss_dssp GGGSSCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 112457999998765
No 401
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=83.91 E-value=5.9 Score=31.99 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+... ...++. ++.+|+.+...
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~-~~~~D~~~~~~~~~~~~~ 78 (263)
T 3ai3_A 6 SGKVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEK-----FGVRVL-EVAVDVATPEGVDAVVES 78 (263)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----HCCCEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-----cCCceE-EEEcCCCCHHHHHHHHHH
Confidence 46788888865 555555555542 2348999999988776665555432 024688 89999874310
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 79 ~~~~~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 79 VRSSFGGADILVNNAGT 95 (263)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 01358999988765
No 402
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=83.88 E-value=4.4 Score=32.67 Aligned_cols=76 Identities=24% Similarity=0.220 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.++|=.|+++| ++..+++.+. ...+|+.++.+++.++...+.+ ..++. ++.+|+.+...
T Consensus 8 ~~k~vlITGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~-~~~~D~~~~~~~~~~~~~ 76 (261)
T 3n74_A 8 EGKVALITGAGSG-FGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---------GDAAL-AVAADISKEADVDAAVEA 76 (261)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---------CTTEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---------CCceE-EEEecCCCHHHHHHHHHH
Confidence 4678999997755 4444444432 2348999999998776655543 23688 99999874321
Q ss_pred ---CCCCccEEEecCcCc
Q psy425 225 ---KNGPYDVIHFGSGVK 239 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~~ 239 (254)
..++.|+++.+.+..
T Consensus 77 ~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 77 ALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHhcCCCCEEEECCccC
Confidence 113589999887763
No 403
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=83.76 E-value=1.1 Score=34.70 Aligned_cols=44 Identities=23% Similarity=0.397 Sum_probs=32.2
Q ss_pred cCCCCCEEEEEcC--CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHH
Q psy425 150 KLLPGANVLDLGF--GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFM 195 (254)
Q Consensus 150 ~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~ 195 (254)
.++++++||.+|+ |.|.....++...+. +|+++|.+++.++.++
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLS 80 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHH
Confidence 5788999999995 345555555555444 7999999998776654
No 404
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=83.60 E-value=1.7 Score=40.75 Aligned_cols=85 Identities=14% Similarity=0.056 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-----------CCCEEEEEeC---CHHHHHHHHH-----------HHHhhCCCc--
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-----------DKGHVTAVDH---IPQLINLFMT-----------KLKISYPKL-- 205 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-----------~~~~v~gvD~---s~~~l~~a~~-----------~~~~~~~~~-- 205 (254)
+.-+|||+|-|+|...+...+... ..-+++++|. +++.+..+.. .+.......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 345999999999998776655431 1236899999 6666653322 222211000
Q ss_pred -----ccC--CCeeEEEEcCCCCCCcC-----CCCccEEEecCcC
Q psy425 206 -----YKL--YKIMDVVEWDARKPYKK-----NGPYDVIHFGSGV 238 (254)
Q Consensus 206 -----~~~--~~v~~~~~~d~~~~~~~-----~~~fD~I~~~~~~ 238 (254)
+.. -.++ +..+|+.+..+. ...||+|+..+--
T Consensus 146 ~~~~~~~~~~~~l~-l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~ 189 (676)
T 3ps9_A 146 CHRLLLDAGRVTLD-LWFGDINELTSQLDDSLNQKVDAWFLDGFA 189 (676)
T ss_dssp EEEEEEGGGTEEEE-EEESCHHHHGGGBCGGGTTCEEEEEECCSC
T ss_pred ceEEEecCCcEEEE-EecCCHHHHHHhcccccCCcccEEEECCCC
Confidence 001 2345 667777633322 3569999997643
No 405
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=83.60 E-value=3 Score=35.49 Aligned_cols=45 Identities=27% Similarity=0.386 Sum_probs=35.2
Q ss_pred cCCCCCEEEEEcCCC--ChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS--GFMSCCMARMV-GDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~--G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.++++++||-+|+|+ |..+..+++.. +. +|+++|.+++.++.+++
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga--~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHH
Confidence 678999999999984 45566666665 54 79999999998887754
No 406
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=83.59 E-value=4.3 Score=33.74 Aligned_cols=78 Identities=15% Similarity=0.189 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCC------------HHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHI------------PQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
.++++|=.|+++| ++..+++.+ ....+|+.+|.+ ++.++.+.+.+... ..++. ++.+|+
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~Dv 98 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL------GRRII-ASQVDV 98 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT------TCCEE-EEECCT
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc------CCceE-EEECCC
Confidence 5788999997765 444444443 223479999987 66666666665552 35788 999999
Q ss_pred CCCCc----------CCCCccEEEecCcC
Q psy425 220 RKPYK----------KNGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~~----------~~~~fD~I~~~~~~ 238 (254)
.+... ..++.|+++.+.+.
T Consensus 99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 99 RDFDAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 74321 12368999988775
No 407
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=83.57 E-value=9.5 Score=32.15 Aligned_cols=63 Identities=13% Similarity=0.002 Sum_probs=42.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEe-CCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVD-HIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKP 222 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD-~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~ 222 (254)
.+.++|=.|++ |.++..+++.+. ...+|+.++ .+++.++.+.+.+... ...++. ++.+|+.+.
T Consensus 45 ~~k~~lVTGas-~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~-----~~~~~~-~~~~Dl~d~ 109 (328)
T 2qhx_A 45 TVPVALVTGAA-KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR-----RPNSAI-TVQADLSNV 109 (328)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-----STTCEE-EEECCCSSS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh-----cCCeEE-EEEeeCCCc
Confidence 46788877765 555655665542 234899999 9988877776666521 124688 999998753
No 408
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=83.55 E-value=8.9 Score=31.49 Aligned_cols=79 Identities=13% Similarity=0.153 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.+.++|=.|++ |.++..+++.+.. ..+|++++.+++.++...+.+... ...++. ++.+|+.+..
T Consensus 25 ~~k~vlITGas-ggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~-~~~~Dl~~~~~~~~~~~~ 97 (302)
T 1w6u_A 25 QGKVAFITGGG-TGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ-----TGNKVH-AIQCDVRDPDMVQNTVSE 97 (302)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----HSSCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----cCCceE-EEEeCCCCHHHHHHHHHH
Confidence 46788988865 5566666655422 348999999988777666655442 134688 9999997421
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...+++|+|+.+++.
T Consensus 98 ~~~~~g~id~li~~Ag~ 114 (302)
T 1w6u_A 98 LIKVAGHPNIVINNAAG 114 (302)
T ss_dssp HHHHTCSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 112357999988875
No 409
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=83.49 E-value=5 Score=33.27 Aligned_cols=78 Identities=15% Similarity=0.087 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+..
T Consensus 33 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dv~d~~~v~~~~~~ 104 (291)
T 3cxt_A 33 KGKIALVTGAS-YGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA------GINAH-GYVCDVTDEDGIQAMVAQ 104 (291)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT------TCCCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEE-EEEecCCCHHHHHHHHHH
Confidence 56789988865 555655555542 2348999999988777666665542 24688 8899987421
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...+..|+++.+.+.
T Consensus 105 ~~~~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 105 IESEVGIIDILVNNAGI 121 (291)
T ss_dssp HHHHTCCCCEEEECCCC
T ss_pred HHHHcCCCcEEEECCCc
Confidence 012458999988775
No 410
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=83.42 E-value=1.7 Score=37.44 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=36.0
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGA-ARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH
Confidence 678999999999865 6677777776542 269999999998887754
No 411
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=83.42 E-value=1.7 Score=37.62 Aligned_cols=46 Identities=20% Similarity=0.356 Sum_probs=36.1
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++.++.+++
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGA-SRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH
Confidence 678899999999874 6677777777542 279999999998887754
No 412
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=83.38 E-value=11 Score=31.24 Aligned_cols=81 Identities=12% Similarity=0.003 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEE-EcCCCCCCcC---C
Q psy425 152 LPGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVV-EWDARKPYKK---N 226 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~-~~d~~~~~~~---~ 226 (254)
..+.+||=.|+ +|+++..+++.+.. ..+|++++.++...+...+.+... ...+++ ++ .+|+.+...- .
T Consensus 9 ~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~~D~~d~~~~~~~~ 81 (342)
T 1y1p_A 9 PEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK-----YPGRFE-TAVVEDMLKQGAYDEVI 81 (342)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-----STTTEE-EEECSCTTSTTTTTTTT
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc-----CCCceE-EEEecCCcChHHHHHHH
Confidence 35788998885 57777777665422 238999999887665544443321 124688 88 7898743211 2
Q ss_pred CCccEEEecCcCc
Q psy425 227 GPYDVIHFGSGVK 239 (254)
Q Consensus 227 ~~fD~I~~~~~~~ 239 (254)
..+|+|+..++..
T Consensus 82 ~~~d~vih~A~~~ 94 (342)
T 1y1p_A 82 KGAAGVAHIASVV 94 (342)
T ss_dssp TTCSEEEECCCCC
T ss_pred cCCCEEEEeCCCC
Confidence 2589999887764
No 413
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=83.28 E-value=6.4 Score=31.36 Aligned_cols=74 Identities=14% Similarity=0.092 Sum_probs=49.1
Q ss_pred CCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC---------
Q psy425 154 GANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY--------- 223 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~--------- 223 (254)
+.++|=.|+++| ++..+++.+. ...+|+.++.+++.++...+.+.. ++. ++.+|+.+..
T Consensus 3 ~k~vlVTGas~G-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~-~~~~D~~~~~~v~~~~~~~ 71 (235)
T 3l6e_A 3 LGHIIVTGAGSG-LGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---------AVI-GIVADLAHHEDVDVAFAAA 71 (235)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---------GEE-EEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---------Cce-EEECCCCCHHHHHHHHHHH
Confidence 467888887654 5555555442 234899999999887766555422 588 9999987421
Q ss_pred -cCCCCccEEEecCcC
Q psy425 224 -KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 -~~~~~fD~I~~~~~~ 238 (254)
...+..|+++.+.+.
T Consensus 72 ~~~~g~id~lvnnAg~ 87 (235)
T 3l6e_A 72 VEWGGLPELVLHCAGT 87 (235)
T ss_dssp HHHHCSCSEEEEECCC
T ss_pred HHhcCCCcEEEECCCC
Confidence 012358999988776
No 414
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=83.28 E-value=4.3 Score=33.33 Aligned_cols=78 Identities=22% Similarity=0.223 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCC----------------HHHHHHHHHHHHhhCCCcccCCCeeEEE
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHI----------------PQLINLFMTKLKISYPKLYKLYKIMDVV 215 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s----------------~~~l~~a~~~~~~~~~~~~~~~~v~~~~ 215 (254)
.++++|=.|+++| ++..+++.+ ....+|+.+|.+ ++.++...+.+... ..++. ++
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~ 81 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH------NRRIV-TA 81 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT------TCCEE-EE
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc------CCceE-EE
Confidence 5788999998765 444444443 223479999987 66666665555542 35788 99
Q ss_pred EcCCCCCCc----------CCCCccEEEecCcC
Q psy425 216 EWDARKPYK----------KNGPYDVIHFGSGV 238 (254)
Q Consensus 216 ~~d~~~~~~----------~~~~fD~I~~~~~~ 238 (254)
.+|+.+... ..++.|+++.+.+.
T Consensus 82 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 82 EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 999974210 11368999998875
No 415
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=83.25 E-value=5.5 Score=32.56 Aligned_cols=78 Identities=9% Similarity=-0.018 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~d~~~v~~~~~~ 98 (270)
T 3ftp_A 27 DKQVAIVTGAS-RGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA------GLEGR-GAVLNVNDATAVDALVES 98 (270)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------TCCCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEE-EEEEeCCCHHHHHHHHHH
Confidence 56788888865 455555555442 2348999999998888777776653 24677 88899874210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 99 ~~~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 99 TLKEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11358999998875
No 416
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=83.23 E-value=1.7 Score=37.41 Aligned_cols=46 Identities=22% Similarity=0.317 Sum_probs=36.5
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga-~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGA-SRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH
Confidence 678999999999865 6677777776643 269999999998888764
No 417
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=83.15 E-value=4.7 Score=33.07 Aligned_cols=79 Identities=11% Similarity=0.006 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.+||=.|++ |.++..+++.+. ...+|++++.+++.++...+.+... ...++. ++.+|+.+...
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~Dl~d~~~v~~~~~~ 99 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL-----GAASAH-YIAGTMEDMTFAEQFVAQ 99 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----TCSEEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----CCCceE-EEeCCCCCHHHHHHHHHH
Confidence 46789988865 556666655442 2348999999998887766665543 223688 89999874210
Q ss_pred ---CCCCccEEEec-CcC
Q psy425 225 ---KNGPYDVIHFG-SGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~-~~~ 238 (254)
..+.+|+++.+ ++.
T Consensus 100 ~~~~~g~iD~li~naag~ 117 (286)
T 1xu9_A 100 AGKLMGGLDMLILNHITN 117 (286)
T ss_dssp HHHHHTSCSEEEECCCCC
T ss_pred HHHHcCCCCEEEECCccC
Confidence 01358999877 343
No 418
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=83.06 E-value=5.4 Score=32.65 Aligned_cols=79 Identities=16% Similarity=0.079 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.++++|=.|++. .++..+++.+. ...+|+.++.+++.++.+.+.+... ...++. ++.+|+.+..
T Consensus 26 ~~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~Dv~~~~~v~~~~~~ 98 (277)
T 4fc7_A 26 RDKVAFITGGGS-GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA-----TGRRCL-PLSMDVRAPPAVMAAVDQ 98 (277)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH-----HSSCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----cCCcEE-EEEcCCCCHHHHHHHHHH
Confidence 578899999764 45555555543 3348999999988776666655432 234788 9999997431
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 99 ~~~~~g~id~lv~nAg~ 115 (277)
T 4fc7_A 99 ALKEFGRIDILINCAAG 115 (277)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcC
Confidence 011368999988874
No 419
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=82.96 E-value=4.6 Score=31.93 Aligned_cols=78 Identities=14% Similarity=0.076 Sum_probs=52.5
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-----cC--
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-----KK-- 225 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-----~~-- 225 (254)
++++|=.|++ |.++..+++.+.. ..+|+.++.+++.++.+.+.+... ...++. ++.+|+.+.. ..
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~D~~~~~~v~~~~~~~ 74 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-----QGVEVF-YHHLDVSKAESVEEFSKKV 74 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----HCCCEE-EEECCTTCHHHHHHHCC-H
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-----cCCeEE-EEEeccCCHHHHHHHHHHH
Confidence 4678888865 5555556655422 347999999998887777666532 235788 9999997421 11
Q ss_pred ---CCCccEEEecCcC
Q psy425 226 ---NGPYDVIHFGSGV 238 (254)
Q Consensus 226 ---~~~fD~I~~~~~~ 238 (254)
.++.|+++.+.+.
T Consensus 75 ~~~~g~id~li~~Ag~ 90 (235)
T 3l77_A 75 LERFGDVDVVVANAGL 90 (235)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHhcCCCCEEEECCcc
Confidence 1368999998876
No 420
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=82.95 E-value=2.4 Score=34.79 Aligned_cols=78 Identities=13% Similarity=0.118 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+..
T Consensus 25 ~gk~~lVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dv~d~~~v~~~~~~ 96 (271)
T 4ibo_A 25 GGRTALVTGSS-RGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV------GHDAE-AVAFDVTSESEIIEAFAR 96 (271)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT------TCCEE-ECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceE-EEEcCCCCHHHHHHHHHH
Confidence 57788888865 455555555542 2348999999999888777777653 34788 8899987421
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 97 ~~~~~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 97 LDEQGIDVDILVNNAGI 113 (271)
T ss_dssp HHHHTCCCCEEEECCCC
T ss_pred HHHHCCCCCEEEECCCC
Confidence 112358999998876
No 421
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=82.94 E-value=5.7 Score=32.57 Aligned_cols=78 Identities=17% Similarity=0.194 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGDK-GHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.+||=.|++ |.++..+++.+... .+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 43 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~Dl~d~~~v~~~~~~ 114 (285)
T 2c07_A 43 ENKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF------GYESS-GYAGDVSKKEEISEVINK 114 (285)
T ss_dssp SSCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc------CCcee-EEECCCCCHHHHHHHHHH
Confidence 35788888865 66777777766443 48999998887776666555542 34688 89999874311
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+.+|+|+.+.+.
T Consensus 115 ~~~~~~~id~li~~Ag~ 131 (285)
T 2c07_A 115 ILTEHKNVDILVNNAGI 131 (285)
T ss_dssp HHHHCSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 11358999998775
No 422
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=82.93 E-value=7.2 Score=32.09 Aligned_cols=83 Identities=12% Similarity=0.053 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCCChHHHHHHHH---c---CCCCEEEEEe-----CCHH-------------------HHHHHHHHH---
Q psy425 152 LPGANVLDLGFGSGFMSCCMARM---V---GDKGHVTAVD-----HIPQ-------------------LINLFMTKL--- 198 (254)
Q Consensus 152 ~~~~~VLDiG~G~G~~t~~la~~---~---~~~~~v~gvD-----~s~~-------------------~l~~a~~~~--- 198 (254)
.-...|+|+|+-.|..+..++.. + +...+|+++| ..+. ..+..++.+
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 34569999999999988887654 1 2345899999 2210 111112211
Q ss_pred ---HhhCCCcccCCCeeEEEEcCCCCCCc------CCCCccEEEecCcC
Q psy425 199 ---KISYPKLYKLYKIMDVVEWDARKPYK------KNGPYDVIHFGSGV 238 (254)
Q Consensus 199 ---~~~~~~~~~~~~v~~~~~~d~~~~~~------~~~~fD~I~~~~~~ 238 (254)
...+ ...++|+ ++.|++.+..+ +..+||+|++.+-.
T Consensus 148 ~~~~~~g---~~~~~i~-li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~ 192 (257)
T 3tos_A 148 ECSDFFG---HVTQRSV-LVEGDVRETVPRYLAENPQTVIALAYFDLDL 192 (257)
T ss_dssp HTTSTTT---TSCCSEE-EEESCHHHHHHHHHHHCTTCCEEEEEECCCC
T ss_pred hhhhhcC---CCCCcEE-EEEecHHHHHHHHHHhCCCCceEEEEEcCcc
Confidence 1111 1237899 99999974332 23469999999854
No 423
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=82.91 E-value=1.2 Score=38.58 Aligned_cols=46 Identities=24% Similarity=0.372 Sum_probs=36.9
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga-~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGA-SRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTC-SCEEEECSCTTHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH
Confidence 678899999999974 7777788877653 269999999998887754
No 424
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=82.73 E-value=9.7 Score=31.05 Aligned_cols=78 Identities=14% Similarity=0.155 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCC------------HHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHI------------PQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
.++++|=.|+++| ++..+++.+. ...+|+.+|.+ .+.++...+.+... ..++. ++.+|+
T Consensus 9 ~~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~Dv 80 (281)
T 3s55_A 9 EGKTALITGGARG-MGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT------GRRCI-SAKVDV 80 (281)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT------TCCEE-EEECCT
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc------CCeEE-EEeCCC
Confidence 5788999997654 5555555442 23479999986 55555555555542 35788 999999
Q ss_pred CCCCc----------CCCCccEEEecCcC
Q psy425 220 RKPYK----------KNGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~~----------~~~~fD~I~~~~~~ 238 (254)
.+... ..++.|+++.+.+.
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 81 KDRAALESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp TCHHHHHHHHHHHHHHHTCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 74310 11368999998876
No 425
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=82.67 E-value=5.9 Score=33.23 Aligned_cols=78 Identities=18% Similarity=0.219 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCC------------HHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHI------------PQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~ 219 (254)
.++++|=.|+++| ++..+++.+. ...+|+.+|.+ ++.++...+.+... ..++. ++.+|+
T Consensus 45 ~gk~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~Dv 116 (317)
T 3oec_A 45 QGKVAFITGAARG-QGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ------GRRII-ARQADV 116 (317)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT------TCCEE-EEECCT
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc------CCeEE-EEECCC
Confidence 5778888887655 4445554442 23479999886 66666655555552 35788 999999
Q ss_pred CCCCc----------CCCCccEEEecCcC
Q psy425 220 RKPYK----------KNGPYDVIHFGSGV 238 (254)
Q Consensus 220 ~~~~~----------~~~~fD~I~~~~~~ 238 (254)
.+... ..++.|+++.+.+.
T Consensus 117 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 117 RDLASLQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 74221 11368999998876
No 426
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=82.64 E-value=3.6 Score=33.24 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-----C-
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-----K- 225 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-----~- 225 (254)
.+.+||=.|+ +|.++..+++.+. ...+|+.++.+++.++...+.+... ..++. ++.+|+.+... .
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~~~~~~~~ 84 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK------GFQVT-GSVCDASLRPEREKLMQT 84 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeeE-EEECCCCCHHHHHHHHHH
Confidence 4678887776 5566666665542 2347999999988777666665542 24688 89999874210 0
Q ss_pred -----CCCccEEEecCcC
Q psy425 226 -----NGPYDVIHFGSGV 238 (254)
Q Consensus 226 -----~~~fD~I~~~~~~ 238 (254)
.+++|+|+.+.+.
T Consensus 85 ~~~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 85 VSSMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHHHTTCCSEEEEECCC
T ss_pred HHHHhCCCCcEEEECCCC
Confidence 0458999988765
No 427
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=82.43 E-value=5.6 Score=32.01 Aligned_cols=79 Identities=9% Similarity=-0.045 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC--CCCC------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA--RKPY------ 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~--~~~~------ 223 (254)
.++++|=.|++. .++..+++.+. ...+|+.++.+++.++.+.+.+... ...++. ++.+|+ .+..
T Consensus 11 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~D~~~~~~~~~~~~~ 83 (252)
T 3f1l_A 11 NDRIILVTGASD-GIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE-----TGRQPQ-WFILDLLTCTSENCQQLA 83 (252)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----HSCCCE-EEECCTTTCCHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-----cCCCce-EEEEecccCCHHHHHHHH
Confidence 578899888664 45555555442 2348999999999888777766553 234678 889998 4211
Q ss_pred ----cCCCCccEEEecCcC
Q psy425 224 ----KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 ----~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 84 ~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 84 QRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHHCSCCSEEEECCCC
T ss_pred HHHHHhCCCCCEEEECCcc
Confidence 112368999988775
No 428
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.33 E-value=4.1 Score=34.49 Aligned_cols=46 Identities=26% Similarity=0.346 Sum_probs=36.0
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+.++++||=.|+|. |.++..+++..+. ..++++|.+++.++.+++
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~-~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGA-KSVTAIDISSEKLALAKS 203 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCC-cEEEEEechHHHHHHHHH
Confidence 678999999999975 5566777777653 357899999998887765
No 429
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=82.31 E-value=3.8 Score=33.23 Aligned_cols=78 Identities=13% Similarity=0.091 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++. .++..+++.+. ...+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 6 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~~~~~~~~ 77 (262)
T 1zem_A 6 NGKVCLVTGAGG-NIGLATALRLAEEGTAIALLDMNREALEKAEASVREK------GVEAR-SYVCDVTSEEAVIGTVDS 77 (262)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------TSCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEE-EEEecCCCHHHHHHHHHH
Confidence 467889888754 45555555442 2347999999988777666665542 24688 89999874310
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 78 ~~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 78 VVRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 11358999988764
No 430
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=82.26 E-value=6.4 Score=31.60 Aligned_cols=75 Identities=13% Similarity=0.109 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++ .++..+++.+. ...+|+.++.+++.++...+.+.. ++. ++.+|+.+...
T Consensus 8 ~gk~~lVTGas~-gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~-~~~~Dv~d~~~v~~~~~~ 76 (248)
T 3op4_A 8 EGKVALVTGASR-GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---------NGK-GMALNVTNPESIEAVLKA 76 (248)
T ss_dssp TTCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---------GEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---------cce-EEEEeCCCHHHHHHHHHH
Confidence 567888888765 45555555442 234899999999877766555433 467 88899874321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 77 ~~~~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 77 ITDEFGGVDILVNNAGI 93 (248)
T ss_dssp HHHHHCCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11368999998876
No 431
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=82.22 E-value=1.7 Score=37.04 Aligned_cols=45 Identities=27% Similarity=0.302 Sum_probs=34.1
Q ss_pred cCCCCCEEEEEcC--CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGF--GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.++++++||-+|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga--~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGY--RVLGIDGGEGKEELFRS 212 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSTTHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC--cEEEEcCCHHHHHHHHH
Confidence 5778999999998 346666666666544 89999999887766654
No 432
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=82.06 E-value=4.6 Score=33.20 Aligned_cols=75 Identities=21% Similarity=0.230 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++.| ++..+++.+ ....+|+.++.+++.++.+.+.+ ..++. ++.+|+.+...
T Consensus 28 ~gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~-~~~~Dv~d~~~v~~~~~~ 96 (277)
T 3gvc_A 28 AGKVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAATKI---------GCGAA-ACRVDVSDEQQIIAMVDA 96 (277)
T ss_dssp TTCEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---------CSSCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---------CCcce-EEEecCCCHHHHHHHHHH
Confidence 5778898887655 444444443 22348999999988776655443 23677 89999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 97 ~~~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 97 CVAAFGGVDKLVANAGV 113 (277)
T ss_dssp HHHHHSSCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11358999998876
No 433
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=82.03 E-value=4.8 Score=32.53 Aligned_cols=75 Identities=13% Similarity=0.090 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+ ..++. ++.+|+.+..
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~-~~~~D~~~~~~v~~~~~~ 75 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---------GPAAY-AVQMDVTRQDSIDAAIAA 75 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---------CTTEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------CCCce-EEEeeCCCHHHHHHHHHH
Confidence 57789988865 555555555442 2348999999988766555443 23678 8999997432
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 76 ~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 76 TVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHSSSCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 112368999998876
No 434
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=82.02 E-value=5.7 Score=32.64 Aligned_cols=78 Identities=12% Similarity=0.094 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDH-IPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.+.++|=.|+++| ++..+++.+. ...+|+.++. +++.++...+.+... ..++. ++.+|+.+...
T Consensus 28 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~d~~~v~~~~~ 99 (280)
T 4da9_A 28 ARPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL------GARVI-FLRADLADLSSHQATVD 99 (280)
T ss_dssp CCCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT------TCCEE-EEECCTTSGGGHHHHHH
T ss_pred CCCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc------CCcEE-EEEecCCCHHHHHHHHH
Confidence 5778898887654 5555555442 2347999995 777776666666552 35788 99999985321
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 100 ~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 100 AVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHSCCCEEEEECC-
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 11358999988876
No 435
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=81.81 E-value=4.2 Score=33.81 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.++++|=.|++. .++..+++.+. ...+|+.++.+++.++.+.+.+... ...++. ++.+|+.+..
T Consensus 40 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~-~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 40 SARSVLVTGGTK-GIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL-----GAGNVI-GVRLDVSDPGSCADAART 112 (293)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS-----SSSCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-----CCCcEE-EEEEeCCCHHHHHHHHHH
Confidence 567888888654 45555555442 2348999999998877777666552 235788 9999997531
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 113 ~~~~~g~iD~lvnnAg~ 129 (293)
T 3rih_A 113 VVDAFGALDVVCANAGI 129 (293)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 112358999988776
No 436
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=81.75 E-value=2.5 Score=35.95 Aligned_cols=80 Identities=18% Similarity=0.234 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC--CC-EEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc---CC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD--KG-HVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK---KN 226 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~--~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~---~~ 226 (254)
.+++||=.| |+|.++..+++.+.. .. +|++++.++.......+.+. ..+++ ++.+|+.+... .-
T Consensus 20 ~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--------~~~v~-~~~~Dl~d~~~l~~~~ 89 (344)
T 2gn4_A 20 DNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--------DPRMR-FFIGDVRDLERLNYAL 89 (344)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--------CTTEE-EEECCTTCHHHHHHHT
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--------CCCEE-EEECCCCCHHHHHHHH
Confidence 567899887 467788777765432 22 79999999876655444332 24788 99999975321 12
Q ss_pred CCccEEEecCcCcCch
Q psy425 227 GPYDVIHFGSGVKHIP 242 (254)
Q Consensus 227 ~~fD~I~~~~~~~~~~ 242 (254)
..+|+|+..++..+.+
T Consensus 90 ~~~D~Vih~Aa~~~~~ 105 (344)
T 2gn4_A 90 EGVDICIHAAALKHVP 105 (344)
T ss_dssp TTCSEEEECCCCCCHH
T ss_pred hcCCEEEECCCCCCCC
Confidence 3589999998876543
No 437
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=81.75 E-value=4.4 Score=32.70 Aligned_cols=77 Identities=18% Similarity=0.100 Sum_probs=50.7
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc--------
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-------- 224 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-------- 224 (254)
++++|=.|++ |.++..+++.+.. ..+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~v~~~~~~~ 73 (256)
T 1geg_A 2 KKVALVTGAG-QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA------GGHAV-AVKVDVSDRDQVFAAVEQA 73 (256)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEE-EEEecCCCHHHHHHHHHHH
Confidence 3567878865 5566666655422 348999999988777666655542 24688 89999874310
Q ss_pred --CCCCccEEEecCcC
Q psy425 225 --KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 --~~~~fD~I~~~~~~ 238 (254)
..+.+|+++.+.+.
T Consensus 74 ~~~~g~id~lv~nAg~ 89 (256)
T 1geg_A 74 RKTLGGFDVIVNNAGV 89 (256)
T ss_dssp HHHTTCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 12368999988765
No 438
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=81.67 E-value=4.6 Score=34.15 Aligned_cols=47 Identities=26% Similarity=0.174 Sum_probs=34.8
Q ss_pred cCCCCCEEEEEcCCCC-hHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGSG-FMSCCMARMVGDKGHVTAVDHIPQLINLFMTK 197 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~G-~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~ 197 (254)
.+++|++||=+|+|++ .++..+++..+ ..+|+++|.+++.++.+++.
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~~ 207 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKKI 207 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhhc
Confidence 6789999999999874 45555555432 24899999999987776653
No 439
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=81.64 E-value=5.8 Score=32.38 Aligned_cols=78 Identities=21% Similarity=0.229 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeC-------------CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDH-------------IPQLINLFMTKLKISYPKLYKLYKIMDVVEWD 218 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d 218 (254)
.++++|=.|+++| ++..+++.+ ....+|+.+|. +++.++...+.+... ..++. ++.+|
T Consensus 10 ~~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~D 81 (277)
T 3tsc_A 10 EGRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA------NRRIV-AAVVD 81 (277)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT------TCCEE-EEECC
T ss_pred CCCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc------CCeEE-EEECC
Confidence 5788999997655 444444443 22348999998 677776666665552 35788 89999
Q ss_pred CCCCCc----------CCCCccEEEecCcC
Q psy425 219 ARKPYK----------KNGPYDVIHFGSGV 238 (254)
Q Consensus 219 ~~~~~~----------~~~~fD~I~~~~~~ 238 (254)
+.+... ..++.|+++.+.+.
T Consensus 82 ~~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 82 TRDFDRLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 974210 11458999998876
No 440
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=81.55 E-value=1.2 Score=37.35 Aligned_cols=44 Identities=25% Similarity=0.203 Sum_probs=36.8
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+|. |..+..+++..+. +|++++ +++.++.+++
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGY--VVDLVS-ASLSQALAAK 183 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTC--EEEEEC-SSCCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEE-ChhhHHHHHH
Confidence 577899999999964 7788888888765 899999 9888888765
No 441
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=81.53 E-value=1.9 Score=36.45 Aligned_cols=44 Identities=18% Similarity=0.219 Sum_probs=35.1
Q ss_pred cCCCCCEEEEEcC--CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHH
Q psy425 150 KLLPGANVLDLGF--GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFM 195 (254)
Q Consensus 150 ~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~ 195 (254)
.++++++||-+|+ |.|..+..+++..+. +|++++.+++.++.+.
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~ 191 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKGC--RVVGIAGGAEKCRFLV 191 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHH
Confidence 6789999999998 346677777776554 8999999998877763
No 442
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=81.48 E-value=2.7 Score=35.77 Aligned_cols=45 Identities=20% Similarity=0.285 Sum_probs=36.1
Q ss_pred cCCCCCEEEEEcC--CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGF--GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.++++++||-+|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGA--RVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh
Confidence 5678999999998 456777777776554 89999999998887754
No 443
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=81.47 E-value=4 Score=33.37 Aligned_cols=80 Identities=14% Similarity=0.063 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.++|=.|++ |.++..+++.+.. ..+|++++.+++.++...+.+...+ ...++. ++.+|+.+...
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~-~~~~Dl~~~~~v~~~~~~ 104 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG----YPGTLI-PYRCDLSNEEDILSMFSA 104 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CSSEEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC----CCceEE-EEEecCCCHHHHHHHHHH
Confidence 46788888854 5666666655422 3489999999887776666655532 123577 88999874321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+.+|+|+.+.+.
T Consensus 105 ~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 105 IRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHCCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCCC
Confidence 01358999988765
No 444
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.27 E-value=4.7 Score=32.52 Aligned_cols=81 Identities=16% Similarity=0.164 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++.+.+.+.... ....++. ++.+|+.+...
T Consensus 6 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~-~~~~Dv~~~~~v~~~~~~ 80 (250)
T 3nyw_A 6 QKGLAIITGASQG-IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN---KHVQEPI-VLPLDITDCTKADTEIKD 80 (250)
T ss_dssp CCCEEEEESTTSH-HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHC---TTSCCCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc---cccCcce-EEeccCCCHHHHHHHHHH
Confidence 4678888887655 4444444432 12379999999998888777766531 0125788 89999974210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 81 ~~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 81 IHQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHHCCEEEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 12468999998876
No 445
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=81.12 E-value=2.4 Score=35.87 Aligned_cols=43 Identities=19% Similarity=0.173 Sum_probs=33.0
Q ss_pred cCCCCCEEEEEcC--CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHH
Q psy425 150 KLLPGANVLDLGF--GSGFMSCCMARMVGDKGHVTAVDHIPQLINLF 194 (254)
Q Consensus 150 ~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a 194 (254)
.+.++++||-.|+ |.|..+..++...+. +|+++|.+++.++.+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKGC--KVVGAAGSDEKIAYL 186 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTTC--EEEEEESSHHHHHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHH
Confidence 5778999999998 345555666665444 899999999888776
No 446
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=81.08 E-value=2.7 Score=36.72 Aligned_cols=47 Identities=26% Similarity=0.330 Sum_probs=36.9
Q ss_pred cCCCCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Q psy425 150 KLLPGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMTK 197 (254)
Q Consensus 150 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~~ 197 (254)
.+++|++||=+|+|. |..+..+|+..+. .+|+++|.+++.++.+++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGA-SKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHc
Confidence 477899999999865 6677777777542 3799999999998888654
No 447
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=80.89 E-value=3.9 Score=32.75 Aligned_cols=78 Identities=18% Similarity=0.099 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeC-CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDH-IPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.++++|=.|++ |.++..+++.+.. ..+|+.++. +++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 3 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~~~~~~~ 74 (246)
T 2uvd_A 3 KGKVALVTGAS-RGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL------GSDAI-AVRADVANAEDVTNMVK 74 (246)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCcEE-EEEcCCCCHHHHHHHHH
Confidence 35678877754 5566666655422 337999998 887776666655542 24688 89999874321
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 75 ~~~~~~g~id~lv~nAg~ 92 (246)
T 2uvd_A 75 QTVDVFGQVDILVNNAGV 92 (246)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 01358999988775
No 448
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=80.70 E-value=2.3 Score=35.22 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++.+.+.+... ..++. ++.+|+.+...
T Consensus 7 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~~~~~v~~~~~~ 78 (280)
T 3tox_A 7 EGKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG------GGEAA-ALAGDVGDEALHEALVEL 78 (280)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT------TCCEE-ECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEE-EEECCCCCHHHHHHHHHH
Confidence 5678888887654 4555555432 2348999999998887777666542 35788 88899874310
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 79 ~~~~~g~iD~lvnnAg~ 95 (280)
T 3tox_A 79 AVRRFGGLDTAFNNAGA 95 (280)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11358999988775
No 449
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=80.67 E-value=4.2 Score=32.82 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+.. ..+|+.++.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 13 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~-~~~~D~~~~~~~~~~~~~ 84 (260)
T 2zat_A 13 ENKVALVTAST-DGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE------GLSVT-GTVCHVGKAEDRERLVAM 84 (260)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCceE-EEEccCCCHHHHHHHHHH
Confidence 46788888864 5566666655422 338999999988776666655542 24688 88899874210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 85 ~~~~~g~iD~lv~~Ag~ 101 (260)
T 2zat_A 85 AVNLHGGVDILVSNAAV 101 (260)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11358999988765
No 450
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.30 E-value=4.1 Score=33.24 Aligned_cols=81 Identities=12% Similarity=0.059 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+.... ....++. ++.+|+.+...
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~-~~~~D~~~~~~~~~~~~~ 79 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG---VSEQNVN-SVVADVTTDAGQDEILST 79 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCGGGEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc---cCCCcee-EEecccCCHHHHHHHHHH
Confidence 45678877765 555655555442 23489999999887776665552210 0123688 89999874311
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 80 ~~~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 80 TLGKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHHHSCCCEEEECCC-
T ss_pred HHHHcCCCCEEEECCCC
Confidence 01258999988765
No 451
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=79.88 E-value=9.1 Score=31.34 Aligned_cols=75 Identities=20% Similarity=0.160 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++...+.+ ..++. ++.+|+.+...
T Consensus 26 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~-~~~~Dv~d~~~v~~~~~~ 94 (277)
T 4dqx_A 26 NQRVCIVTGGGSG-IGRATAELFAKNGAYVVVADVNEDAAVRVANEI---------GSKAF-GVRVDVSSAKDAESMVEK 94 (277)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---------CTTEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------CCceE-EEEecCCCHHHHHHHHHH
Confidence 5678898887654 5555555442 2348999999988766554432 23688 89999974310
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 95 ~~~~~g~iD~lv~nAg~ 111 (277)
T 4dqx_A 95 TTAKWGRVDVLVNNAGF 111 (277)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 11358999998875
No 452
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=79.73 E-value=5.7 Score=32.33 Aligned_cols=78 Identities=22% Similarity=0.273 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDH-IPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.+++||=.|+++| ++..+++.+. ...+|+.++. +++..+...+.+... ..++. ++.+|+.+...
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~v~~~~~ 99 (271)
T 4iin_A 28 TGKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK------GYKAA-VIKFDAASESDFIEAIQ 99 (271)
T ss_dssp SCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEE-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc------CCceE-EEECCCCCHHHHHHHHH
Confidence 5778888887654 5555555442 2347999988 566666666666552 35788 99999874210
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 100 ~~~~~~g~id~li~nAg~ 117 (271)
T 4iin_A 100 TIVQSDGGLSYLVNNAGV 117 (271)
T ss_dssp HHHHHHSSCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCc
Confidence 11368999998876
No 453
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=79.73 E-value=7.2 Score=31.53 Aligned_cols=75 Identities=19% Similarity=0.150 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+.. ++. ++.+|+.+...
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~-~~~~D~~~~~~v~~~~~~ 74 (260)
T 1nff_A 6 TGKVALVSGGA-RGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---------AAR-YVHLDVTQPAQWKAAVDT 74 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---------GEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---------Cce-EEEecCCCHHHHHHHHHH
Confidence 46788888865 455555555442 234899999998776554443322 477 88999874211
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 75 ~~~~~g~iD~lv~~Ag~ 91 (260)
T 1nff_A 75 AVTAFGGLHVLVNNAGI 91 (260)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 01258999998775
No 454
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=79.54 E-value=7.2 Score=31.95 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCC-ChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGS-GFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~-G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.++++|=.|+++ |.++..+++.+.. ..+|+.++.+++..+. .+.+... ..++. ++.+|+.+...
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~l~~~------~~~~~-~~~~Dl~~~~~v~~~~~ 91 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKR-VREIAKG------FGSDL-VVKCDVSLDEDIKNLKK 91 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHH------TTCCC-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHh------cCCeE-EEEcCCCCHHHHHHHHH
Confidence 577899999863 6666666665422 3479999998752222 2223221 12477 88999874210
Q ss_pred ----CCCCccEEEecCcCc
Q psy425 225 ----KNGPYDVIHFGSGVK 239 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~~ 239 (254)
..++.|+++.+.+..
T Consensus 92 ~~~~~~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 92 FLEENWGSLDIIVHSIAYA 110 (285)
T ss_dssp HHHHHTSCCCEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 123589999988753
No 455
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=79.48 E-value=9.3 Score=30.30 Aligned_cols=79 Identities=11% Similarity=0.137 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCC--CCCC------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA--RKPY------ 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~--~~~~------ 223 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+... ...++. ++..|+ .+..
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~d~d~~~~~~~~~~~ 85 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA-----GQPQPL-IIALNLENATAQQYRELA 85 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TSCCCE-EEECCTTTCCHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc-----CCCCce-EEEeccccCCHHHHHHHH
Confidence 57788888875 455555555542 2348999999999888887777663 235677 888877 3210
Q ss_pred ----cCCCCccEEEecCcC
Q psy425 224 ----KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 ----~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 86 ~~~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 86 ARVEHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHHHHHSCCSEEEECCCC
T ss_pred HHHHHhCCCCCEEEECCcc
Confidence 011358999998775
No 456
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=79.37 E-value=3.6 Score=34.88 Aligned_cols=83 Identities=22% Similarity=0.197 Sum_probs=44.3
Q ss_pred CCCEEEEEcCCCChHHHHHHH---HcCCCC--EEEEEeCCH--------HHHHH-HHHHHHhhCCCcccCCC--eeEEEE
Q psy425 153 PGANVLDLGFGSGFMSCCMAR---MVGDKG--HVTAVDHIP--------QLINL-FMTKLKISYPKLYKLYK--IMDVVE 216 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~---~~~~~~--~v~gvD~s~--------~~l~~-a~~~~~~~~~~~~~~~~--v~~~~~ 216 (254)
+.-+|||+|-|+|...+...+ ..++.. +++++|..+ +.... .+....... . ....+ ++ +..
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p-~-~~~~~v~L~-l~~ 172 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVP-E-YEGERLSLK-VLL 172 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCS-E-EECSSEEEE-EEE
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCc-c-ccCCcEEEE-EEe
Confidence 345899999999996543322 234444 456777532 11112 222222210 0 11223 45 778
Q ss_pred cCCCCCCcC--CCCccEEEecCcC
Q psy425 217 WDARKPYKK--NGPYDVIHFGSGV 238 (254)
Q Consensus 217 ~d~~~~~~~--~~~fD~I~~~~~~ 238 (254)
+|+.+..+. ...||+|+..+--
T Consensus 173 GDa~~~l~~l~~~~~Da~flDgFs 196 (308)
T 3vyw_A 173 GDARKRIKEVENFKADAVFHDAFS 196 (308)
T ss_dssp SCHHHHGGGCCSCCEEEEEECCSC
T ss_pred chHHHHHhhhcccceeEEEeCCCC
Confidence 898743332 3469999998643
No 457
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=79.24 E-value=3.9 Score=36.61 Aligned_cols=61 Identities=20% Similarity=0.225 Sum_probs=0.0
Q ss_pred CCCChHHHHHHHHcCCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----cCCCCccEEEe
Q psy425 162 FGSGFMSCCMARMVGDKG-HVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----KKNGPYDVIHF 234 (254)
Q Consensus 162 ~G~G~~t~~la~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----~~~~~fD~I~~ 234 (254)
||.|..+..+|+.+...+ .|+.+|.+++.++.+.+.+ .+. +++||+..+. ..-...|++++
T Consensus 9 ~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----------~~~-~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 9 LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----------DLR-VVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----------SCE-EEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----------CcE-EEEEcCCCHHHHHhcCCCcCCEEEE
No 458
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.16 E-value=3.9 Score=33.54 Aligned_cols=81 Identities=15% Similarity=0.063 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+...+ ....++. ++.+|+.+...
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~-~~~~Dv~~~~~v~~~~~~ 79 (280)
T 1xkq_A 5 SNKTVIITGSS-NGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG---VSEKQVN-SVVADVTTEDGQDQIINS 79 (280)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---CCGGGEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCcceE-EEEecCCCHHHHHHHHHH
Confidence 46778888865 555655555542 23489999999987776666554421 0011688 89999974310
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 80 ~~~~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 80 TLKQFGKIDVLVNNAGA 96 (280)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 11358999988765
No 459
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=79.13 E-value=4.6 Score=34.60 Aligned_cols=45 Identities=18% Similarity=0.196 Sum_probs=36.1
Q ss_pred cCCCCCEEEEEcC--CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGF--GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAKC--HVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHH
Confidence 6789999999993 357777778877654 89999999988877765
No 460
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=79.08 E-value=3.4 Score=35.38 Aligned_cols=44 Identities=30% Similarity=0.413 Sum_probs=34.8
Q ss_pred cCC-CCCEEEEEcCCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHH
Q psy425 150 KLL-PGANVLDLGFGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFM 195 (254)
Q Consensus 150 ~~~-~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~ 195 (254)
.+. +|++||-+|+|. |..+..+++..+. +|++++.+++.++.++
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGH--HVTVISSSNKKREEAL 221 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSTTHHHHHH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeCChHHHHHHH
Confidence 567 899999999864 6666777777654 8999999988777665
No 461
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=79.01 E-value=5.2 Score=32.13 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++...+.+ ..++. ++.+|+.+...
T Consensus 5 ~gk~vlVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~-~~~~Dv~~~~~v~~~~~~ 73 (247)
T 3rwb_A 5 AGKTALVTGAAQG-IGKAIAARLAADGATVIVSDINAEGAKAAAASI---------GKKAR-AIAADISDPGSVKALFAE 73 (247)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---------CTTEE-ECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------CCceE-EEEcCCCCHHHHHHHHHH
Confidence 5778998887654 4555555442 2348999999988766655443 23688 88899874210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 74 ~~~~~g~id~lv~nAg~ 90 (247)
T 3rwb_A 74 IQALTGGIDILVNNASI 90 (247)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHCCCCCEEEECCCC
Confidence 11358999988876
No 462
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=78.44 E-value=8.2 Score=31.68 Aligned_cols=79 Identities=18% Similarity=0.196 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDH-IPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~------- 223 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++. +++.++...+.+... ...++. ++.+|+.+..
T Consensus 24 ~~k~~lVTGas~G-IG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~-~~~~Dv~d~~~v~~~~~ 96 (281)
T 3v2h_A 24 MTKTAVITGSTSG-IGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL-----SSGTVL-HHPADMTKPSEIADMMA 96 (281)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT-----CSSCEE-EECCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc-----cCCcEE-EEeCCCCCHHHHHHHHH
Confidence 4678999997654 5555555442 2348999998 666666666655542 235788 8999987421
Q ss_pred ---cCCCCccEEEecCcC
Q psy425 224 ---KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 ---~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 97 ~~~~~~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 97 MVADRFGGADILVNNAGV 114 (281)
T ss_dssp HHHHHTSSCSEEEECCCC
T ss_pred HHHHHCCCCCEEEECCCC
Confidence 112468999998876
No 463
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=78.42 E-value=17 Score=29.00 Aligned_cols=80 Identities=8% Similarity=0.013 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC----CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-----
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG----DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----- 223 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++.+.+.+.... ...++. ++.+|+.+..
T Consensus 5 ~~k~~lVTGas-~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~-~~~~Dv~~~~~v~~~ 78 (259)
T 1oaa_A 5 GCAVCVLTGAS-RGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ----PDLKVV-LAAADLGTEAGVQRL 78 (259)
T ss_dssp BSEEEEESSCS-SHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC----TTSEEE-EEECCTTSHHHHHHH
T ss_pred CCcEEEEeCCC-ChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC----CCCeEE-EEecCCCCHHHHHHH
Confidence 35677777765 556666666553 34589999999988777666655421 123578 8899987421
Q ss_pred -----c--CCCCcc--EEEecCcC
Q psy425 224 -----K--KNGPYD--VIHFGSGV 238 (254)
Q Consensus 224 -----~--~~~~fD--~I~~~~~~ 238 (254)
. ..+.+| +++.+.+.
T Consensus 79 ~~~~~~~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 79 LSAVRELPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp HHHHHHSCCCTTCCEEEEEECCCC
T ss_pred HHHHHhccccccCCccEEEECCcc
Confidence 0 123578 88887765
No 464
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=78.24 E-value=2.6 Score=35.80 Aligned_cols=45 Identities=20% Similarity=0.192 Sum_probs=35.0
Q ss_pred cCCCCCEEEEEcC--CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGF--GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.++++++||-+|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMGC--YVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 5778999999997 346666777766554 89999999988777653
No 465
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=78.12 E-value=3.8 Score=29.38 Aligned_cols=70 Identities=16% Similarity=0.190 Sum_probs=41.7
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--c--CCCC
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY--K--KNGP 228 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~--~--~~~~ 228 (254)
+.+|+=+|+ |.++..+++.+.. ..+|+.+|.+++.++.++ . .... +..+|..... . ....
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~--------~~~~-~~~~d~~~~~~l~~~~~~~ 70 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S--------YATH-AVIANATEENELLSLGIRN 70 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----T--------TCSE-EEECCTTCHHHHHTTTGGG
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H--------hCCE-EEEeCCCCHHHHHhcCCCC
Confidence 467898996 6666666655422 236999999976543321 1 1245 6677765311 1 1234
Q ss_pred ccEEEecCcC
Q psy425 229 YDVIHFGSGV 238 (254)
Q Consensus 229 fD~I~~~~~~ 238 (254)
+|+|+.....
T Consensus 71 ~d~vi~~~~~ 80 (144)
T 2hmt_A 71 FEYVIVAIGA 80 (144)
T ss_dssp CSEEEECCCS
T ss_pred CCEEEECCCC
Confidence 8998887653
No 466
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=77.96 E-value=7.5 Score=31.37 Aligned_cols=81 Identities=11% Similarity=0.070 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCCC-hHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSG-FMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G-~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.+.++|=.|++.+ .++..+++.+ ....+|+.++.++...+.+.+..... ...++. ++.+|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL-----DRNDSI-ILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS-----SSCCCE-EEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc-----CCCCce-EEeCCCCCHHHHHHHHH
Confidence 5778999997632 2344444433 22347999999877666666655542 233788 99999985321
Q ss_pred ----CCCCccEEEecCcCc
Q psy425 225 ----KNGPYDVIHFGSGVK 239 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~~ 239 (254)
..++.|.++.+.+..
T Consensus 80 ~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp HHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhCCeeEEEEccccc
Confidence 113589998887653
No 467
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=77.73 E-value=2.8 Score=33.59 Aligned_cols=78 Identities=21% Similarity=0.145 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCC-HHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHI-PQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.+.+||=.|+ +|.++..+++.+.. ..+|++++.+ ++.++...+.+... ..++. ++.+|+.+...
T Consensus 6 ~~k~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~-~~~~D~~~~~~~~~~~~ 77 (258)
T 3afn_B 6 KGKRVLITGS-SQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD------GGDAA-FFAADLATSEACQQLVD 77 (258)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT------TCEEE-EEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc------CCceE-EEECCCCCHHHHHHHHH
Confidence 4678887775 56666666665532 3379999988 66665555555442 24688 99999875321
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..+.+|+|+.+.+.
T Consensus 78 ~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 78 EFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHSSCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 01258999988764
No 468
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=77.72 E-value=6.9 Score=31.19 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCe-eEEEEcCCCCCCcC-----
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKI-MDVVEWDARKPYKK----- 225 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v-~~~~~~d~~~~~~~----- 225 (254)
.+.++|=.|++ |.++..+++.+.. ..+|++++.+++.++...+.+. .++ . ++.+|+.+...-
T Consensus 10 ~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~-~~~~D~~~~~~~~~~~~ 78 (254)
T 2wsb_A 10 DGACAAVTGAG-SGIGLEICRAFAASGARLILIDREAAALDRAAQELG---------AAVAA-RIVADVTDAEAMTAAAA 78 (254)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEE-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------cccee-EEEEecCCHHHHHHHHH
Confidence 46788988864 5666666665422 3489999999877665544432 245 7 888998743210
Q ss_pred ----CCCccEEEecCcC
Q psy425 226 ----NGPYDVIHFGSGV 238 (254)
Q Consensus 226 ----~~~fD~I~~~~~~ 238 (254)
.+++|+|+.+.+.
T Consensus 79 ~~~~~~~id~li~~Ag~ 95 (254)
T 2wsb_A 79 EAEAVAPVSILVNSAGI 95 (254)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhhCCCcEEEECCcc
Confidence 1358999988775
No 469
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.20 E-value=5 Score=33.34 Aligned_cols=81 Identities=17% Similarity=0.124 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+...+. ...++. ++.+|+.+...
T Consensus 25 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~-~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 25 SGKSVIITGSS-NGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV---PAEKIN-AVVADVTEASGQDDIINT 99 (297)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CGGGEE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---CCceEE-EEecCCCCHHHHHHHHHH
Confidence 56788888864 556666665542 234899999999887776666554210 011688 89999874321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+++|+++.+.+.
T Consensus 100 ~~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 11358999998765
No 470
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=77.16 E-value=2.9 Score=35.19 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=36.0
Q ss_pred cCCCCCEEEEEcC-C-CChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGF-G-SGFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~-G-~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+ | .|..+..+++..+. +|++++.+++.++.+++
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALGA--KLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 5778999999993 3 47777777777655 89999999998888765
No 471
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=77.11 E-value=5 Score=32.25 Aligned_cols=78 Identities=21% Similarity=0.138 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDH-IPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.+.+||=.|+ +|.++..+++.+. ...+|+.++. +++.++...+.+... ..++. ++.+|+.+...
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~------~~~~~-~~~~D~~~~~~~~~~~~ 77 (261)
T 1gee_A 6 EGKVVVITGS-STGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV------GGEAI-AVKGDVTVESDVINLVQ 77 (261)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCEEE-EEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc------CCceE-EEECCCCCHHHHHHHHH
Confidence 4678888775 4666666665542 2347999998 777666655555542 24678 88999874211
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..+.+|+|+.+.+.
T Consensus 78 ~~~~~~g~id~li~~Ag~ 95 (261)
T 1gee_A 78 SAIKEFGKLDVMINNAGL 95 (261)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 01258999988765
No 472
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=77.02 E-value=9.9 Score=30.68 Aligned_cols=77 Identities=18% Similarity=0.112 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.+||=.|+ +|.++..+++.+. ...+|+.++.+++..+...+.+.. ..++. ++.+|+.+...
T Consensus 15 ~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~-~~~~D~~~~~~~~~~~~~ 85 (278)
T 2bgk_A 15 QDKVAIITGG-AGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-------PDVIS-FVHCDVTKDEDVRNLVDT 85 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-------TTTEE-EEECCTTCHHHHHHHHHH
T ss_pred cCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-------CCceE-EEECCCCCHHHHHHHHHH
Confidence 4678998886 4666666665542 234899999998765544433321 23688 99999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+|+.+.+.
T Consensus 86 ~~~~~~~id~li~~Ag~ 102 (278)
T 2bgk_A 86 TIAKHGKLDIMFGNVGV 102 (278)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 01358999988765
No 473
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=76.82 E-value=14 Score=30.31 Aligned_cols=78 Identities=14% Similarity=0.094 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHH-HHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQ-LINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~-~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++ ..+.+.+.+.. ...++. ++.+|+.+...
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~-~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK------EGVKCV-LLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT------TTCCEE-EEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh------cCCcEE-EEECCCCCHHHHHHHHH
Confidence 5788999997654 5555555442 2347999998865 34444444444 235788 99999974310
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 118 ~~~~~~g~iD~lvnnAg~ 135 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQ 135 (291)
T ss_dssp HHHHHHSSCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 12358999988664
No 474
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=76.73 E-value=6.1 Score=32.23 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDH-IPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++. +++..+...+.+... ..++. ++.+|+.+...
T Consensus 27 ~~k~vlVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~D~~d~~~v~~~~~ 98 (269)
T 4dmm_A 27 TDRIALVTGAS-RGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA------GGEAF-AVKADVSQESEVEALFA 98 (269)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEE-EEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc------CCcEE-EEECCCCCHHHHHHHHH
Confidence 57788888865 445555555442 2337888888 677776666666552 34788 89999974321
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 99 ~~~~~~g~id~lv~nAg~ 116 (269)
T 4dmm_A 99 AVIERWGRLDVLVNNAGI 116 (269)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 11368999998876
No 475
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=76.60 E-value=11 Score=30.81 Aligned_cols=77 Identities=18% Similarity=0.125 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.++|=.|++.| ++..+++.+. ...+|+.++.++.. +...+.+.. ...++. ++.+|+.+...
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~------~~~~~~-~~~~Dv~d~~~v~~~~~~ 100 (273)
T 3uf0_A 30 AGRTAVVTGAGSG-IGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIAD------GGGSAE-AVVADLADLEGAANVAEE 100 (273)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSTHH-HHHHHHHHT------TTCEEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcCHHHH-HHHHHHHHh------cCCcEE-EEEecCCCHHHHHHHHHH
Confidence 5788999987654 5555555442 23479999965443 333333333 234688 89999874211
Q ss_pred --CCCCccEEEecCcC
Q psy425 225 --KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 --~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 101 ~~~~g~iD~lv~nAg~ 116 (273)
T 3uf0_A 101 LAATRRVDVLVNNAGI 116 (273)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCcEEEECCCC
Confidence 11368999998876
No 476
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=76.52 E-value=3.1 Score=33.89 Aligned_cols=77 Identities=16% Similarity=0.150 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CCChHHHHHHHHcCC-CCEEEEEeCCHHH-HHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-----
Q psy425 153 PGANVLDLGF-GSGFMSCCMARMVGD-KGHVTAVDHIPQL-INLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK----- 224 (254)
Q Consensus 153 ~~~~VLDiG~-G~G~~t~~la~~~~~-~~~v~gvD~s~~~-l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~----- 224 (254)
.++++|=.|+ |+|.++..+++.+.. ..+|+.++.+++. ++... .. ...++. ++.+|+.+...
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~------~~~~~~-~~~~Dv~~~~~v~~~~ 75 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT---DR------LPAKAP-LLELDVQNEEHLASLA 75 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH---TT------SSSCCC-EEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH---Hh------cCCCce-EEEccCCCHHHHHHHH
Confidence 4678999998 477777777776532 3479999988653 22221 12 123677 88999874210
Q ss_pred -----CCC---CccEEEecCcCc
Q psy425 225 -----KNG---PYDVIHFGSGVK 239 (254)
Q Consensus 225 -----~~~---~fD~I~~~~~~~ 239 (254)
..+ ++|+++.+.+..
T Consensus 76 ~~~~~~~g~~~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 76 GRVTEAIGAGNKLDGVVHSIGFM 98 (269)
T ss_dssp HHHHHHHCTTCCEEEEEECCCCC
T ss_pred HHHHHHhCCCCCceEEEECCccC
Confidence 012 689999887653
No 477
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=76.32 E-value=3.6 Score=34.48 Aligned_cols=44 Identities=20% Similarity=0.277 Sum_probs=33.9
Q ss_pred CCCCC-EEEEEcC-C-CChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 151 LLPGA-NVLDLGF-G-SGFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 151 ~~~~~-~VLDiG~-G-~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
++++. +||=.|+ | .|..+..+++..+. +|++++.+++.++.+++
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga--~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLGY--QVAAVSGRESTHGYLKS 189 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTC--CEEEEESCGGGHHHHHH
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 44432 4999997 3 47788888888765 79999999998888865
No 478
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=76.28 E-value=7.3 Score=31.67 Aligned_cols=78 Identities=17% Similarity=0.077 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHH-HhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKL-KISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~-~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+ ... ..++. ++.+|+.+...
T Consensus 20 ~~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~-~~~~Dl~~~~~v~~~~~ 91 (267)
T 1vl8_A 20 RGRVALVTGGS-RGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY------GVETM-AFRCDVSNYEEVKKLLE 91 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------CCCEE-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------CCeEE-EEEcCCCCHHHHHHHHH
Confidence 56788988865 555655555542 2348999999988776665555 331 24678 88999874310
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..+.+|+++.+.+.
T Consensus 92 ~~~~~~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 92 AVKEKFGKLDTVVNAAGI 109 (267)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 11358999988765
No 479
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=76.28 E-value=1.9 Score=35.95 Aligned_cols=44 Identities=27% Similarity=0.314 Sum_probs=35.1
Q ss_pred CCCCCEEEEEcC--CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 151 LLPGANVLDLGF--GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 151 ~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
+++|++||-+|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL--RVLAAASRPEKLALPLA 168 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSGGGSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh
Confidence 778999999998 346777777777654 89999999988777654
No 480
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=76.14 E-value=4.2 Score=34.23 Aligned_cols=85 Identities=13% Similarity=0.096 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc---CCCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK---KNGP 228 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~---~~~~ 228 (254)
.+.+||=.| |+|+++..+++.+.. ..+|++++.++.........+...... ....+++ ++.+|+.+... ....
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~Dl~d~~~~~~~~~~ 100 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST-EQWSRFC-FIEGDIRDLTTCEQVMKG 100 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCH-HHHTTEE-EEECCTTCHHHHHHHTTT
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhcccc-ccCCceE-EEEccCCCHHHHHHHhcC
Confidence 467899888 568888777766522 348999998543222222222221000 0015799 99999974321 1225
Q ss_pred ccEEEecCcCcC
Q psy425 229 YDVIHFGSGVKH 240 (254)
Q Consensus 229 fD~I~~~~~~~~ 240 (254)
+|+|+..++...
T Consensus 101 ~d~Vih~A~~~~ 112 (351)
T 3ruf_A 101 VDHVLHQAALGS 112 (351)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECCccCC
Confidence 899998887643
No 481
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=76.14 E-value=12 Score=30.48 Aligned_cols=72 Identities=17% Similarity=0.082 Sum_probs=46.2
Q ss_pred CEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----------
Q psy425 155 ANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY---------- 223 (254)
Q Consensus 155 ~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~---------- 223 (254)
++||=-|+++|. +..+++.+ ....+|+.+|.+++.++...+ + ..++. ++.+|+.+..
T Consensus 3 K~vlVTGas~GI-G~aia~~la~~Ga~V~~~~~~~~~~~~~~~---~-------~~~~~-~~~~Dv~~~~~v~~~v~~~~ 70 (247)
T 3ged_A 3 RGVIVTGGGHGI-GKQICLDFLEAGDKVCFIDIDEKRSADFAK---E-------RPNLF-YFHGDVADPLTLKKFVEYAM 70 (247)
T ss_dssp CEEEEESTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHT---T-------CTTEE-EEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEecCCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---h-------cCCEE-EEEecCCCHHHHHHHHHHHH
Confidence 577878877664 44444443 223489999999876544322 1 34688 8999997431
Q ss_pred cCCCCccEEEecCcC
Q psy425 224 KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 ~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 71 ~~~g~iDiLVNNAG~ 85 (247)
T 3ged_A 71 EKLQRIDVLVNNACR 85 (247)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112568999988765
No 482
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=76.12 E-value=2.6 Score=35.86 Aligned_cols=45 Identities=29% Similarity=0.356 Sum_probs=36.6
Q ss_pred cCCCCCEEEEEcC--CCChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 150 KLLPGANVLDLGF--GSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 150 ~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
.+++|++||-+|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGA--KVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 5778999999997 347777788887655 89999999998877765
No 483
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=76.07 E-value=7.8 Score=31.31 Aligned_cols=78 Identities=14% Similarity=0.050 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEE-eCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAV-DHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gv-D~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.++++|=.|++ |.++..+++.+.. ..+|+.+ +.+++.++...+.+... ..++. ++.+|+.+...
T Consensus 3 ~~k~vlVTGas-~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~~~~~v~~~~~ 74 (258)
T 3oid_A 3 QNKCALVTGSS-RGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL------GVKVL-VVKANVGQPAKIKEMFQ 74 (258)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT------TCCEE-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEecCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc------CCcEE-EEEcCCCCHHHHHHHHH
Confidence 46778888865 4555555555422 3367776 88888777776666552 34788 99999974321
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 75 ~~~~~~g~id~lv~nAg~ 92 (258)
T 3oid_A 75 QIDETFGRLDVFVNNAAS 92 (258)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 11357999988865
No 484
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=76.03 E-value=8.5 Score=34.50 Aligned_cols=84 Identities=17% Similarity=0.099 Sum_probs=51.9
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCCCC-EEEEEeCCHH---HHHHHHHHHHhhCC---CcccCCCeeEEEEcCCCCCC--c
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGDKG-HVTAVDHIPQ---LINLFMTKLKISYP---KLYKLYKIMDVVEWDARKPY--K 224 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~~~-~v~gvD~s~~---~l~~a~~~~~~~~~---~~~~~~~v~~~~~~d~~~~~--~ 224 (254)
..+||=.| |+|+++..+++.+...+ +|++++.++. ......+.+..... ......+++ ++.+|+.+.. .
T Consensus 150 ~~~VLVTG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~-~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 150 LGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIE-VIVGDFECMDDVV 227 (508)
T ss_dssp CEEEEESC-TTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEE-EEEEBTTBCSSCC
T ss_pred CCeEEEEC-CccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceE-EEecCCcccccCC
Confidence 35777776 58999998888874433 7999987766 33333333322100 000235899 9999998522 1
Q ss_pred CCCCccEEEecCcCc
Q psy425 225 KNGPYDVIHFGSGVK 239 (254)
Q Consensus 225 ~~~~fD~I~~~~~~~ 239 (254)
....+|+|+..++..
T Consensus 228 ~~~~~D~Vih~Aa~~ 242 (508)
T 4f6l_B 228 LPENMDTIIHAGART 242 (508)
T ss_dssp CSSCCSEEEECCCC-
T ss_pred CccCCCEEEECCcee
Confidence 234689999887653
No 485
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=76.00 E-value=6 Score=32.50 Aligned_cols=75 Identities=17% Similarity=0.137 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.++++|=.|+++| ++..+++.+. ...+|+.++.+++.++...+.. ..++. ++.+|+.+..
T Consensus 4 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~-~~~~Dv~~~~~v~~~~~~ 72 (281)
T 3zv4_A 4 TGEVALITGGASG-LGRALVDRFVAEGARVAVLDKSAERLRELEVAH---------GGNAV-GVVGDVRSLQDQKRAAER 72 (281)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---------BTTEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---------CCcEE-EEEcCCCCHHHHHHHHHH
Confidence 4678898887654 5555555442 2348999999988765544332 24788 9999997421
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 73 ~~~~~g~iD~lvnnAg~ 89 (281)
T 3zv4_A 73 CLAAFGKIDTLIPNAGI 89 (281)
T ss_dssp HHHHHSCCCEEECCCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 112358999998875
No 486
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=75.89 E-value=4.9 Score=32.44 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=48.6
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHH--HHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQL--INLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~--l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
++++|=.|++ |.++..+++.+.. ..+|+.++.+++. ++...+.+... ..++. ++.+|+.+...
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~-~~~~Dv~~~~~v~~~~~ 73 (258)
T 3a28_C 2 SKVAMVTGGA-QGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA------DQKAV-FVGLDVTDKANFDSAID 73 (258)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT------TCCEE-EEECCTTCHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc------CCcEE-EEEccCCCHHHHHHHHH
Confidence 4678888865 4555555544321 2379999998876 55555555442 24688 89999874321
Q ss_pred ----CCCCccEEEecCcC
Q psy425 225 ----KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 74 ~~~~~~g~iD~lv~nAg~ 91 (258)
T 3a28_C 74 EAAEKLGGFDVLVNNAGI 91 (258)
T ss_dssp HHHHHHTCCCEEEECCCC
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 11358999988775
No 487
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=75.88 E-value=18 Score=28.85 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=44.5
Q ss_pred EEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----------c
Q psy425 156 NVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----------K 224 (254)
Q Consensus 156 ~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----------~ 224 (254)
++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+. .++. ++.+|+.+.. .
T Consensus 2 ~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~-~~~~Dv~~~~~v~~~~~~~~~ 70 (248)
T 3asu_A 2 IVLVTGAT-AGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---------DNLY-IAQLDVRNRAAIEEMLASLPA 70 (248)
T ss_dssp EEEETTTT-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------TTEE-EEECCTTCHHHHHHHHHTSCT
T ss_pred EEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------CceE-EEEcCCCCHHHHHHHHHHHHH
Confidence 45656654 445555555432 23479999999877655444321 3688 8899987421 1
Q ss_pred CCCCccEEEecCcC
Q psy425 225 KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 71 ~~g~iD~lvnnAg~ 84 (248)
T 3asu_A 71 EWCNIDILVNNAGL 84 (248)
T ss_dssp TTCCCCEEEECCCC
T ss_pred hCCCCCEEEECCCc
Confidence 12468999988765
No 488
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=75.87 E-value=5.7 Score=32.03 Aligned_cols=78 Identities=19% Similarity=0.156 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeC-CHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-----C
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDH-IPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK-----K 225 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~-----~ 225 (254)
.+.+||=.|+ +|.++..+++.+.. ..+|++++. +++.++...+.+... ..++. ++.+|+.+... .
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~------~~~~~-~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL------GAQGV-AIQADISKPSEVVALFD 91 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT------TCCEE-EEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc------CCcEE-EEEecCCCHHHHHHHHH
Confidence 4678887775 56677666665532 237999998 777766665555542 34688 89999874321 0
Q ss_pred -----CCCccEEEecCcC
Q psy425 226 -----NGPYDVIHFGSGV 238 (254)
Q Consensus 226 -----~~~fD~I~~~~~~ 238 (254)
.+.+|+|+.+.+.
T Consensus 92 ~~~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 92 KAVSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHHHSCEEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 1258999888765
No 489
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=75.85 E-value=5.9 Score=32.01 Aligned_cols=79 Identities=15% Similarity=0.136 Sum_probs=48.2
Q ss_pred CCCEEEEEcCC-CChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc------
Q psy425 153 PGANVLDLGFG-SGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------ 224 (254)
Q Consensus 153 ~~~~VLDiG~G-~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------ 224 (254)
.++++|=.|++ +|.++..+++.+.. ..+|+.++.+++..+.+ +.+... ...+. ++.+|+.+...
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~l~~~------~~~~~-~~~~D~~~~~~v~~~~~ 78 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEA------LGGAL-LFRADVTQDEELDALFA 78 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHH-HHHHHH------TTCCE-EEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHh------cCCcE-EEECCCCCHHHHHHHHH
Confidence 46789999986 36666666655422 23799999987622222 223221 12477 88999874321
Q ss_pred ----CCCCccEEEecCcCc
Q psy425 225 ----KNGPYDVIHFGSGVK 239 (254)
Q Consensus 225 ----~~~~fD~I~~~~~~~ 239 (254)
..++.|+++.+.+..
T Consensus 79 ~~~~~~g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 79 GVKEAFGGLDYLVHAIAFA 97 (261)
T ss_dssp HHHHHHSSEEEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 013589999988753
No 490
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=75.84 E-value=2.4 Score=35.56 Aligned_cols=80 Identities=14% Similarity=0.086 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-----cCC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-----KKN 226 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-----~~~ 226 (254)
.+++||=.| |+|+++..+++.+.. ..+|++++.++.......+.+... ...++. ++.+|+.+.. ...
T Consensus 4 ~~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~Dl~d~~~~~~~~~~ 76 (341)
T 3enk_A 4 TKGTILVTG-GAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI-----TGKTPA-FHETDVSDERALARIFDA 76 (341)
T ss_dssp SSCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH-----HSCCCE-EECCCTTCHHHHHHHHHH
T ss_pred CCcEEEEec-CCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh-----cCCCce-EEEeecCCHHHHHHHHhc
Confidence 456888887 567788777766533 238999988765444333333331 234688 9999997432 111
Q ss_pred CCccEEEecCcCc
Q psy425 227 GPYDVIHFGSGVK 239 (254)
Q Consensus 227 ~~fD~I~~~~~~~ 239 (254)
..+|+|+..++..
T Consensus 77 ~~~d~vih~A~~~ 89 (341)
T 3enk_A 77 HPITAAIHFAALK 89 (341)
T ss_dssp SCCCEEEECCCCC
T ss_pred cCCcEEEECcccc
Confidence 2589999888764
No 491
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=75.82 E-value=9.7 Score=31.15 Aligned_cols=77 Identities=10% Similarity=0.034 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCCChHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC--------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMV-GDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY-------- 223 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~-------- 223 (254)
.|+.+|=-|+++|. +..+++.+ ...++|+.++.+++..+.+.+. .+. ..++. ++.+|+.+..
T Consensus 6 ~gKvalVTGas~GI-G~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~-~~~------~~~~~-~~~~Dv~~~~~v~~~v~~ 76 (258)
T 4gkb_A 6 QDKVVIVTGGASGI-GGAISMRLAEERAIPVVFARHAPDGAFLDAL-AQR------QPRAT-YLPVELQDDAQCRDAVAQ 76 (258)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESSCCCHHHHHHH-HHH------CTTCE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCcccHHHHHHH-Hhc------CCCEE-EEEeecCCHHHHHHHHHH
Confidence 57889999988775 33333333 2234799999887655544433 332 34678 8999997421
Q ss_pred --cCCCCccEEEecCcC
Q psy425 224 --KKNGPYDVIHFGSGV 238 (254)
Q Consensus 224 --~~~~~fD~I~~~~~~ 238 (254)
...++.|+++.+.+.
T Consensus 77 ~~~~~G~iDiLVNnAGi 93 (258)
T 4gkb_A 77 TIATFGRLDGLVNNAGV 93 (258)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 113568999998876
No 492
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=75.73 E-value=5.1 Score=34.04 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=33.6
Q ss_pred CCCEEEEEc-CCC-ChHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q psy425 153 PGANVLDLG-FGS-GFMSCCMARMVGDKGHVTAVDHIPQLINLFMT 196 (254)
Q Consensus 153 ~~~~VLDiG-~G~-G~~t~~la~~~~~~~~v~gvD~s~~~l~~a~~ 196 (254)
+|++||-+| +|. |..+..+++..+. +|++++.+++.++.+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL--RVITTASRNETIEWTKK 193 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEECCSHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 899999994 543 6777777777654 89999999998888776
No 493
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=75.68 E-value=4.1 Score=33.63 Aligned_cols=75 Identities=15% Similarity=0.058 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC------cC
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY------KK 225 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~------~~ 225 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++..+.+.+.+ ..++. ++.+|+.+.. ..
T Consensus 15 ~gk~vlVTGas-~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~-~~~~Dl~d~~~v~~~~~~ 83 (291)
T 3rd5_A 15 AQRTVVITGAN-SGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---------AGQVE-VRELDLQDLSSVRRFADG 83 (291)
T ss_dssp TTCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---------SSEEE-EEECCTTCHHHHHHHHHT
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------cCCee-EEEcCCCCHHHHHHHHHh
Confidence 57889988876 455555555442 2348999999988765543332 24688 9999987421 11
Q ss_pred CCCccEEEecCcC
Q psy425 226 NGPYDVIHFGSGV 238 (254)
Q Consensus 226 ~~~fD~I~~~~~~ 238 (254)
-+..|+++.+++.
T Consensus 84 ~~~iD~lv~nAg~ 96 (291)
T 3rd5_A 84 VSGADVLINNAGI 96 (291)
T ss_dssp CCCEEEEEECCCC
T ss_pred cCCCCEEEECCcC
Confidence 1358999998876
No 494
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=75.60 E-value=19 Score=28.76 Aligned_cols=81 Identities=11% Similarity=0.032 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCC-CChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC-----
Q psy425 151 LLPGANVLDLGFG-SGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----- 223 (254)
Q Consensus 151 ~~~~~~VLDiG~G-~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----- 223 (254)
...+++||=.|++ +|.++..+++.+.. ..+|+.++.++...+.+++..... .++. ++.+|+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~-~~~~Dv~~~~~v~~~ 82 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-------GSEL-VFPCDVADDAQIDAL 82 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-------TCCC-EEECCTTCHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc-------CCcE-EEECCCCCHHHHHHH
Confidence 3468899999985 35566666655422 347999998866555555544442 3578 8999997421
Q ss_pred -----cCCCCccEEEecCcCc
Q psy425 224 -----KKNGPYDVIHFGSGVK 239 (254)
Q Consensus 224 -----~~~~~fD~I~~~~~~~ 239 (254)
...++.|+++.+.+..
T Consensus 83 ~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 83 FASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp HHHHHHHCSCEEEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCccC
Confidence 1124689999887763
No 495
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=75.57 E-value=6.3 Score=31.23 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.+.++|=.|+ +|.++..+++.+. ...+|+.++.+++.++...+.+... ...++. ++.+|+.+...
T Consensus 6 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~~~D~~~~~~~~~~~~~ 78 (248)
T 2pnf_A 6 QGKVSLVTGS-TRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK-----YGVKAH-GVEMNLLSEESINKAFEE 78 (248)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-----HCCCEE-EEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh-----cCCceE-EEEccCCCHHHHHHHHHH
Confidence 4677887776 5666666666542 2348999999988776665555431 124688 89999874210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+.+|+|+.+.+.
T Consensus 79 ~~~~~~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 79 IYNLVDGIDILVNNAGI 95 (248)
T ss_dssp HHHHSSCCSEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 11358999988775
No 496
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=75.33 E-value=5.6 Score=31.65 Aligned_cols=77 Identities=16% Similarity=0.083 Sum_probs=49.6
Q ss_pred CCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHH-HhhCCCcccCCCeeEEEEcCCCCCCc-----C-
Q psy425 154 GANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKL-KISYPKLYKLYKIMDVVEWDARKPYK-----K- 225 (254)
Q Consensus 154 ~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~-~~~~~~~~~~~~v~~~~~~d~~~~~~-----~- 225 (254)
++++|=.|++ |.++..+++.+.. ..+|+.++.+++.++...+.+ .. ...++. ++.+|+.+... .
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~-~~~~D~~~~~~~~~~~~~ 73 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA------YADKVL-RVRADVADEGDVNAAIAA 73 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT------TGGGEE-EEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh------cCCcEE-EEEecCCCHHHHHHHHHH
Confidence 4578888854 6666666665422 248999999988776655544 22 123688 89999874311 0
Q ss_pred ----CCCccEEEecCcC
Q psy425 226 ----NGPYDVIHFGSGV 238 (254)
Q Consensus 226 ----~~~fD~I~~~~~~ 238 (254)
.+.+|+|+.+.+.
T Consensus 74 ~~~~~~~id~li~~Ag~ 90 (250)
T 2cfc_A 74 TMEQFGAIDVLVNNAGI 90 (250)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 1258999988765
No 497
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=75.32 E-value=7.4 Score=31.84 Aligned_cols=77 Identities=13% Similarity=0.009 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++ |.++..+++.+. ...+|+.++.+++.++...+.+.. ..++. ++.+|+.+...
T Consensus 28 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~-~~~~Dv~d~~~v~~~~~~ 98 (276)
T 2b4q_A 28 AGRIALVTGGS-RGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-------YGDCQ-AIPADLSSEAGARRLAQA 98 (276)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-------SSCEE-ECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCceE-EEEeeCCCHHHHHHHHHH
Confidence 46789988865 555555555542 234899999998877665555433 12677 88899874210
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..+..|+++.+.+.
T Consensus 99 ~~~~~g~iD~lvnnAg~ 115 (276)
T 2b4q_A 99 LGELSARLDILVNNAGT 115 (276)
T ss_dssp HHHHCSCCSEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 12358999998875
No 498
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=75.32 E-value=11 Score=29.62 Aligned_cols=73 Identities=14% Similarity=0.113 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCe-eEEEEcCCCCCCc-CCCCc
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKI-MDVVEWDARKPYK-KNGPY 229 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v-~~~~~~d~~~~~~-~~~~f 229 (254)
.+++||=.|+ +|.++..+++.+.. ..+|++++.+++.++... . .++ + ++.+|+.+... .-+..
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~--------~~~~~-~~~~Dl~~~~~~~~~~~ 85 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----E--------RGASD-IVVANLEEDFSHAFASI 85 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----H--------TTCSE-EEECCTTSCCGGGGTTC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----h--------CCCce-EEEcccHHHHHHHHcCC
Confidence 5789998885 56777666665422 348999999987654322 1 257 8 99999872221 12358
Q ss_pred cEEEecCcCc
Q psy425 230 DVIHFGSGVK 239 (254)
Q Consensus 230 D~I~~~~~~~ 239 (254)
|+|+.+.+..
T Consensus 86 D~vi~~ag~~ 95 (236)
T 3e8x_A 86 DAVVFAAGSG 95 (236)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999887763
No 499
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=75.27 E-value=5.4 Score=31.37 Aligned_cols=68 Identities=19% Similarity=0.166 Sum_probs=43.2
Q ss_pred EEEEEcCCCChHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCC----cCCCCcc
Q psy425 156 NVLDLGFGSGFMSCCMARMVGD-KGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPY----KKNGPYD 230 (254)
Q Consensus 156 ~VLDiG~G~G~~t~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~----~~~~~fD 230 (254)
+|+=+|+ |.++..+++.+.. ...|+.+|.+++.++...+. ..+. ++.+|..... ..-...|
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-----------~~~~-~i~gd~~~~~~l~~a~i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-----------LKAT-IIHGDGSHKEILRDAEVSKND 67 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-----------SSSE-EEESCTTSHHHHHHHTCCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-----------cCCe-EEEcCCCCHHHHHhcCcccCC
Confidence 4666665 6777777665522 23699999999987654432 1466 8889987421 1123578
Q ss_pred EEEecCc
Q psy425 231 VIHFGSG 237 (254)
Q Consensus 231 ~I~~~~~ 237 (254)
+|++...
T Consensus 68 ~vi~~~~ 74 (218)
T 3l4b_C 68 VVVILTP 74 (218)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 8887654
No 500
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=75.10 E-value=4.4 Score=33.25 Aligned_cols=75 Identities=17% Similarity=0.124 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCCChHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHhhCCCcccCCCeeEEEEcCCCCCCc-------
Q psy425 153 PGANVLDLGFGSGFMSCCMARMVG-DKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYK------- 224 (254)
Q Consensus 153 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~v~~~~~~d~~~~~~------- 224 (254)
.++++|=.|++. .++..+++.+. ...+|+.++.+++.++...+.+. .++. ++.+|+.+...
T Consensus 27 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~-~~~~Dv~d~~~v~~~~~~ 95 (272)
T 4dyv_A 27 GKKIAIVTGAGS-GVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---------DDAL-CVPTDVTDPDSVRALFTA 95 (272)
T ss_dssp -CCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---------SCCE-EEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------CCeE-EEEecCCCHHHHHHHHHH
Confidence 567788777654 45555555442 23489999999887666554432 3688 89999974321
Q ss_pred ---CCCCccEEEecCcC
Q psy425 225 ---KNGPYDVIHFGSGV 238 (254)
Q Consensus 225 ---~~~~fD~I~~~~~~ 238 (254)
..++.|+++.+.+.
T Consensus 96 ~~~~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 96 TVEKFGRVDVLFNNAGT 112 (272)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11368999998876
Done!