RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy425
(254 letters)
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 55.2 bits (132), Expect = 8e-10
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 143 CLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISY 202
L+ L D+L GA LD+G GSG ++ C ARMVG G V +DHI +L++ + ++
Sbjct: 66 ALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD 125
Query: 203 PKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCR 250
P + +V D R Y + PYD IH G+ +P + +
Sbjct: 126 PT-LLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLK 172
Score = 42.2 bits (98), Expect = 2e-05
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG-YIDSPHNFGTNSIVERPSYVSS 65
S+ + I L++N + ++V E + DR +AK Y+DSP + G + + P +
Sbjct: 6 ASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNPYMDSPQSIGFQATISAPHMHAY 65
Query: 66 CS----------IWYLVICLGKGSKSI 82
L + G G +
Sbjct: 66 ALELLFDQLHEGAKALDVGSGSGILTA 92
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 223
Score = 47.9 bits (113), Expect = 2e-07
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 138 RPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKG-----HVTAVDHIPQLIN 192
A L++L D L PGA +LD+G GSG+++ C R + KG + ++H +L+
Sbjct: 65 HMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVR 124
Query: 193 LFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCR 250
L + +++ +VE D RK Y N PY+ IH G+ P E+
Sbjct: 125 RSKANLNTDDRSMLDSGQLL-IVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLA 181
Score = 41.4 bits (96), Expect = 4e-05
Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG-YIDSPHNFGTNSIVERPSYVSS 65
+N+ I+ LK++ + V +A++ DR ++ Y+D+P G + P +
Sbjct: 10 ANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTISAPHMHAF 69
Query: 66 CSIW 69
+
Sbjct: 70 ALEY 73
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 46.7 bits (110), Expect = 4e-07
Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 8/104 (7%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
+ +D+G G+G ++ +A V V A+D P+ I+ L + + L
Sbjct: 30 EPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNL-----QRHGLG 81
Query: 210 KIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQK 253
+ ++E DA + K D+ G + + + K
Sbjct: 82 DNVTLMEGDAPEALCKIPDIDIAVVGGSGGELQEILRIIKDKLK 125
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 47.5 bits (112), Expect = 5e-07
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
PG VL+ G GSG MS +++ VG +G V + + +L
Sbjct: 98 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDL 138
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 47.0 bits (111), Expect = 6e-07
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 131 RPDQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQL 190
R Q++ A+ + L PG ++L++G GSG MS + + KG +T V+
Sbjct: 64 RNTQIISEIDASYIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDN 122
Query: 191 INL 193
+
Sbjct: 123 LKK 125
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 227
Score = 45.1 bits (106), Expect = 2e-06
Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 141 AACLQHLSDKLL-PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
AA + L + + PG +VL LG SG + ++ +VG +G + ++ P+++ + +
Sbjct: 60 AAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIV- 118
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHF 234
+ + + + DA KP + +
Sbjct: 119 -------EERRNIVPILGDATKPEEYRALVPKVDV 146
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 44.2 bits (104), Expect = 6e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 151 LLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINL 193
+ PGA VL+ G GSG ++ + R VG G V + +
Sbjct: 94 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEH 136
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 43.2 bits (101), Expect = 9e-06
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 141 AACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKI 200
A L+ KL VL LG SG +A +V D+G + AV++ + +
Sbjct: 44 AMILKGHRLKLRGDERVLYLGAASGTTVSHLADIV-DEGIIYAVEYSAKPFEKLL----- 97
Query: 201 SYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRS 251
+L + + + +DA KP+K +G + + ++ L +
Sbjct: 98 ---ELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQIEILKAN 145
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 43.6 bits (102), Expect = 9e-06
Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
Query: 131 RPDQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQL 190
R Q++ ++ + + D + G ++D G GSG M +AR VG G V A + +
Sbjct: 82 RRTQIVYPKDSSFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEF 140
Query: 191 INLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCR 250
L + L + L + + + D + + + + + + + +
Sbjct: 141 AKLAESNL-----TKWGLIERVTIKVRDISEGFDEKDVDALFLDVPDPWNYIDKCWEALK 195
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 40.3 bits (93), Expect = 8e-05
Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 2/101 (1%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
++ PG +LDLG GSG M C AR G T +D + + +
Sbjct: 30 RMKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGVSERVHF 87
Query: 210 KIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCR 250
D + A + G +++ +
Sbjct: 88 IHNDAAGYVANEKCDVAACVGATWIAGGFAGAEELLAQSLK 128
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 39.7 bits (92), Expect = 1e-04
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Query: 141 AACLQHLSD-KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
AA ++ L + + +L LG +G +A + V A+++ P+++ +
Sbjct: 61 AAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKG-IVYAIEYAPRIMRELLDACA 119
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+ I+ ++ + N V V
Sbjct: 120 -------ERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPN 155
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 39.9 bits (92), Expect = 2e-04
Identities = 9/52 (17%), Positives = 22/52 (42%)
Query: 144 LQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFM 195
L + K+ +++D G G G++ + ++ + T +D L+
Sbjct: 18 LVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAR 69
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 224
Score = 38.7 bits (89), Expect = 3e-04
Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 11/125 (8%)
Query: 126 HSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVD 185
+L P L G VL++G G G+ + +A +V V +V+
Sbjct: 43 EALPILPGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVE 99
Query: 186 HIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEV 245
++ N L Y + ++ D Y++ PYD + + + +
Sbjct: 100 INEKMYNYASKLLSY--------YNNIKLILGDGTLGYEEEKPYDRVVVWATAPTLLCKP 151
Query: 246 SKLCR 250
+ +
Sbjct: 152 YEQLK 156
Score = 28.6 bits (63), Expect = 0.67
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 24 DERVLEAIQWVDRDRFAKDGYID 46
+ + EA VDR F + D
Sbjct: 13 TQELAEAFNKVDRSLFLPENLKD 35
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 38.9 bits (89), Expect = 3e-04
Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
L VLD+ G G ++ A V V A D ++ + ++ + + +
Sbjct: 12 ALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYV 68
Query: 210 KIMDVVEWDARKPYKKNGPYDVIHF 234
+ + + H
Sbjct: 69 QGDAEQMPFTDERFHIVTCRIAAHH 93
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 37.6 bits (86), Expect = 7e-04
Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 3/98 (3%)
Query: 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIM 212
VLD+G G+G + + V VD +++ + + + + + +
Sbjct: 16 AEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGT 72
Query: 213 DVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCR 250
+ H S V+ EV+++ +
Sbjct: 73 AESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLK 110
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 37.6 bits (86), Expect = 8e-04
Identities = 15/76 (19%), Positives = 22/76 (28%), Gaps = 5/76 (6%)
Query: 129 SGRPDQVLRRPQAACLQHLSD--KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDH 186
+G+ + +HL K G V G A V V+
Sbjct: 19 NGKTAFHQEQGHQLLKKHLDTFLKGKSGLRVFFPLCGKAVEMKWFADR---GHSVVGVEI 75
Query: 187 IPQLINLFMTKLKISY 202
I F T+ +SY
Sbjct: 76 SELGIQEFFTEQNLSY 91
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 37.5 bits (86), Expect = 0.001
Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 8/95 (8%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
L VLD+G G+G + A+ V ++ K KL
Sbjct: 30 HLFKDKVVLDVGSGTGILCMFAAKAGAR--KVIGIECSSISDYAVK------IVKANKLD 81
Query: 210 KIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIE 244
++ +++ + D+I + E
Sbjct: 82 HVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYE 116
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 36.8 bits (84), Expect = 0.002
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
+ VLD+G G+G +S A+ V VD L +L KL
Sbjct: 32 HIFKDKVVLDVGCGTGILSMFAAKAGAK--KVLGVDQSEILYQAMDII------RLNKLE 83
Query: 210 KIMDVVEWDARKPYKKNGPYDVIH 233
+ +++ + + DVI
Sbjct: 84 DTITLIKGKIEEVHLPVEKVDVII 107
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 36.5 bits (83), Expect = 0.002
Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 8/98 (8%)
Query: 153 PGANVLDLGFGSG-----FMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK---ISYPK 204
+L +G G+G +S A+ G + V+ + I + +
Sbjct: 40 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENV 99
Query: 205 LYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+ +K K+ +D IH + ++
Sbjct: 100 KFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK 137
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 215
Score = 36.0 bits (82), Expect = 0.002
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 8/141 (5%)
Query: 110 REVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSC 169
R + + A L Q + P + L PG N+L++G GSG+ +
Sbjct: 35 RYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAA 94
Query: 170 CMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPY 229
++ +V V ++ IP+L+ L+ + K + V+ D K + PY
Sbjct: 95 LISEIVK--TDVYTIERIPELVEFAKRNLERAG------VKNVHVILGDGSKGFPPKAPY 146
Query: 230 DVIHFGSGVKHIPIEVSKLCR 250
DVI +G IP + + +
Sbjct: 147 DVIIVTAGAPKIPEPLIEQLK 167
Score = 34.0 bits (77), Expect = 0.009
Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 5/48 (10%)
Query: 10 QQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDG-----YIDSPHNFG 52
+ ++ LK + + V A R +D +ID P
Sbjct: 9 MRTVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIP 56
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 36.1 bits (82), Expect = 0.002
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 15/151 (9%)
Query: 100 FYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLD 159
+ + H R G S+ + L Q LR A L+ D VLD
Sbjct: 33 YVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDD--KATAVLD 90
Query: 160 LGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDA 219
+G G G+ + A + + +D I + Y + +
Sbjct: 91 IGCGEGYYTHAFADALPE-ITTFGLDVSKVAIKAAAKR-----------YPQVTFCVASS 138
Query: 220 RKPYKKNGPYDVIHFGSGVKHIPIEVSKLCR 250
+ + D I E++++ +
Sbjct: 139 HRLPFSDTSMDAIIRIYAPCKAE-ELARVVK 168
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 35.5 bits (81), Expect = 0.004
Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 8/103 (7%)
Query: 131 RPDQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQL 190
P+Q++ +D+ VL+L +G S A VT VD +
Sbjct: 113 FPEQIVHWEWLKNAVETADR---PLKVLNLFGYTGVASLVAAAAG---AEVTHVDASKKA 166
Query: 191 INLFMTKLKISYPKLYKL-YKIMDVVEWDARKPYKKNGPYDVI 232
I ++ + + + D +++ R+ + YD+I
Sbjct: 167 IGWAKENQVLAGLEQAPIRWICEDAMKFIQREER-RGSTYDII 208
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 35.4 bits (81), Expect = 0.004
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 1/83 (1%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
+L G +DLG G G A G + + +L + + + +
Sbjct: 213 QLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYG 271
Query: 210 KIMDVVEWDARKPYKKNGPYDVI 232
++ VE+ +K + N +
Sbjct: 272 MRLNNVEFSLKKSFVDNNRVAEL 294
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 34.0 bits (77), Expect = 0.012
Identities = 15/98 (15%), Positives = 27/98 (27%), Gaps = 5/98 (5%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
K+ +DLG G G + +A K H V+ T + +
Sbjct: 148 KMTDDDLFVDLGSGVGQVVLQVAAATNCK-HHYGVEKADIPAKYAETMDREFRKWMKWYG 206
Query: 210 KIMDVVEW---DARK-PYKKNGPYDVIHFGSGVKHIPI 243
K D +++ + F + P
Sbjct: 207 KKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPE 244
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 34.1 bits (77), Expect = 0.014
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVD 185
+ A +Q+ L VLD+G G+G +S A+ HV VD
Sbjct: 27 RNAIIQNK--DLFKDKIVLDVGCGTGILSMFAAKHGAK--HVIGVD 68
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 33.0 bits (74), Expect = 0.029
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 1/93 (1%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLY 209
+ VLD+ G+G S + V A D + + + +
Sbjct: 53 RQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVI 112
Query: 210 KIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIP 242
+ + + D P +G VI G+ H+P
Sbjct: 113 EEANWLTLDKDVPA-GDGFDAVICLGNSFAHLP 144
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 260
Score = 31.3 bits (70), Expect = 0.079
Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 8/95 (8%)
Query: 140 QAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLK 199
++ P V+D+ G G +S +A K V A++ P K
Sbjct: 94 NVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTF-----KFL 146
Query: 200 ISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHF 234
+ L K+ M D R + D I
Sbjct: 147 VENIHLNKVEDRMSAYNMDNR-DFPGENIADRILM 180
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 31.2 bits (69), Expect = 0.079
Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Query: 145 QHLSD-KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISY 202
Q+ S ++PGA VL G ++ HV + + + T+
Sbjct: 11 QYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQP 66
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 30.7 bits (68), Expect = 0.12
Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIM 212
G +VLDLG G G R G VD IN + + + ++
Sbjct: 24 RGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ 81
Query: 213 DVVEWDARKPYKKN 226
D + +
Sbjct: 82 DSYGRHMDLGKEFD 95
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain
{Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 30.4 bits (67), Expect = 0.16
Identities = 10/65 (15%), Positives = 16/65 (24%)
Query: 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIM 212
G VL+ G G V+ P+ ++L I L
Sbjct: 19 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEPGEA 78
Query: 213 DVVEW 217
+
Sbjct: 79 FDLIL 83
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human
(Homo sapiens) [TaxId: 9606]}
Length = 83
Score = 28.6 bits (63), Expect = 0.20
Identities = 5/43 (11%), Positives = 14/43 (32%), Gaps = 3/43 (6%)
Query: 7 TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDGYIDSPH 49
T+++ + L + + + + + D K I
Sbjct: 2 TADRDILARLHKAVTSHYHAITQEFENFDTM---KTNTISREE 41
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 29.7 bits (66), Expect = 0.21
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 141 AACLQHLSDKL--LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVD 185
AA + G +V+D G G+G ++C + + +D
Sbjct: 34 AAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDID 80
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 30.0 bits (66), Expect = 0.26
Identities = 15/111 (13%), Positives = 31/111 (27%), Gaps = 4/111 (3%)
Query: 144 LQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYP 203
++ + L + LDL G+G ++ + K T + Q + S
Sbjct: 28 IEKCVENNLVFDDYLDLACGTGNLTENLCP----KFKNTWAVDLSQEMLSEAENKFRSQG 83
Query: 204 KLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK 254
+L RK D ++ + + K+
Sbjct: 84 LKPRLACQDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKE 134
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538
{Streptococcus pyogenes [TaxId: 1314]}
Length = 152
Score = 29.1 bits (64), Expect = 0.30
Identities = 11/75 (14%), Positives = 20/75 (26%)
Query: 152 LPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKI 211
G VLDL GSG ++ + + Q I + + + L
Sbjct: 13 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKME 72
Query: 212 MDVVEWDARKPYKKN 226
+ +
Sbjct: 73 AERAIDCLTGRFDLV 87
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine
methyltransferase {Red algae (Galdieria sulphuraria)
[TaxId: 130081]}
Length = 282
Score = 29.4 bits (64), Expect = 0.39
Identities = 13/73 (17%), Positives = 22/73 (30%), Gaps = 8/73 (10%)
Query: 129 SGRPDQVLRRPQAACLQHLSDKLL------PGANVLDLGFGSGFMSCCMARMVGDKGHVT 182
+R + L+ +L A LDLG G G + + R G +
Sbjct: 37 EPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSID 94
Query: 183 AVDHIPQLINLFM 195
++ P
Sbjct: 95 CLNIAPVQNKRNE 107
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO)
{Haemophilus influenzae [TaxId: 727]}
Length = 225
Score = 29.0 bits (63), Expect = 0.43
Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 153 PGANVLDLGFGSGFMSCCMARMVGDKG-HVTAVDHIPQLINLFMTK 197
+NV DLG G + R + + +D+ ++
Sbjct: 39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQH 84
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 29.1 bits (64), Expect = 0.46
Identities = 9/46 (19%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Query: 150 KLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFM 195
N+L+LG G + + D +T V+ + I+
Sbjct: 17 PFFRPGNLLELGSFKGDFTSRLQEHFND---ITCVEASEEAISHAQ 59
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 28.9 bits (63), Expect = 0.48
Identities = 11/82 (13%), Positives = 21/82 (25%), Gaps = 2/82 (2%)
Query: 133 DQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLIN 192
++L+ + L G ++D+G G A +T D +
Sbjct: 31 AEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNRE 88
Query: 193 LFMTKLKISYPKLYKLYKIMDV 214
LK +
Sbjct: 89 ELEKWLKKEPGAYDWTPAVKFA 110
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl
O-methyltransferase {Thermotoga maritima [TaxId: 2336]}
Length = 213
Score = 28.4 bits (62), Expect = 0.62
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 6/70 (8%)
Query: 10 QQFIQYLKENNFAQDERVLEAIQWVDRDRFA----KDGYIDSPHNFGTNSIVERPSYVSS 65
++ LK+ + + +A + R+ F Y+ + E S S
Sbjct: 3 EKLFWILKKYGV--SDHIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQ 60
Query: 66 CSIWYLVICL 75
S+ L +
Sbjct: 61 PSLMALFMEW 70
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Bacillus subtilis [TaxId: 1423]}
Length = 204
Score = 28.3 bits (62), Expect = 0.74
Identities = 10/89 (11%), Positives = 23/89 (25%)
Query: 157 VLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVE 216
+++G G G MA+ D ++ ++ + L D +
Sbjct: 33 HIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT 92
Query: 217 WDARKPYKKNGPYDVIHFGSGVKHIPIEV 245
K + +H +
Sbjct: 93 DVFEPGEVKRVYLNFSDPWPKKRHEKRRL 121
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 28.3 bits (62), Expect = 0.77
Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 157 VLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYK-IMDVV 215
+++G G G MA+ D ++ L L++ P + L+ D+
Sbjct: 35 HVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT 94
Query: 216 EWDARK 221
++
Sbjct: 95 DYFEDG 100
>d2bzea1 b.34.21.1 (A:345-476) RNA polymerase-associated protein
RTF1 homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 132
Score = 27.5 bits (61), Expect = 0.87
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 206 YKLYKIMDVVEWDARKPYKKNGP----YDVIHFGSGVKHIPIEV 245
Y++ +I VVE K Y+ G + G+ + +E
Sbjct: 48 YRVAEITGVVETA--KVYQLGGTRTNKGLQLRHGNDQRVFRLEF 89
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 27.6 bits (60), Expect = 1.1
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 136 LRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARM 174
L R + L K++ LDLG G+G S +A
Sbjct: 15 LTRTHSDVLAAA--KVVAPGRTLDLGCGNGRNSLYLAAN 51
>d1uj8a1 a.159.5.1 (A:13-76) Iron-sulfur cluster assembly protein
IscX {Escherichia coli [TaxId: 562]}
Length = 64
Score = 25.8 bits (57), Expect = 1.2
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 7/23 (30%)
Query: 20 NFAQD-----ERVLEAIQ--WVD 35
+F D E++LEAI W+D
Sbjct: 40 DFDDDPQASNEKILEAILLVWLD 62
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 26.9 bits (58), Expect = 2.2
Identities = 7/68 (10%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Query: 153 PGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIM 212
+ LD G G G ++ + + ++ + ++ +L + L +
Sbjct: 93 GTSRALDCGAGIGRITKNLLTKLYA--TTDLLEPVKHMLEEAKRELAGMPVGKFILASME 150
Query: 213 DVVEWDAR 220
Sbjct: 151 TATLPPNT 158
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase
{Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Length = 189
Score = 26.7 bits (58), Expect = 2.3
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 162 FGSGFMSCCMARMVGDKGH-VTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDAR 220
FGSG +A ++ K V + + L K K ++ + + +
Sbjct: 13 FGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE--KRENVLFLKGVQLASNITFTSD 70
Query: 221 KPYKKNGPYDVIH 233
NG ++
Sbjct: 71 VEKAYNGAEIILF 83
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase
domain {Thermotoga maritima [TaxId: 2336]}
Length = 192
Score = 26.3 bits (57), Expect = 3.4
Identities = 7/47 (14%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Query: 143 CLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQ 189
++ L + +LD G G S + + +D +
Sbjct: 15 VIEFLKPE--DEKIILDCTVGEGGHSRAILEHCPG-CRIIGIDVDSE 58
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase
TM1293 {Thermotoga maritima [TaxId: 2336]}
Length = 208
Score = 25.9 bits (55), Expect = 4.1
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 149 DKLLPGANVLDLGFGSGFMSCCMARMV 175
LLP +++G G+G + + +
Sbjct: 32 KCLLPEGRGVEIGVGTGRFAVPLKIKI 58
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 26.1 bits (56), Expect = 4.4
Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 7/98 (7%)
Query: 138 RPQAACLQHLSDKLL---PGANVLDLGFGSGFMS----CCMARMVGDKGHVTAVDHIPQL 190
+ +L +K++ ++LD G+ + + H + VD L
Sbjct: 99 DSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLL 158
Query: 191 INLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGP 228
I+L + + K+ L++ +
Sbjct: 159 ISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 196
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 25.6 bits (55), Expect = 4.7
Identities = 14/67 (20%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Query: 162 FGSGFMSCCMARMVGDKGH-VTAVDHIPQLI-NLFMTKLKISYPKLYKLYKIMDVVEWDA 219
G G A + KG V A D Q I + I+ D++ D
Sbjct: 7 LGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDI 66
Query: 220 RKPYKKN 226
K
Sbjct: 67 GLAVKDA 73
>d1xqba_ e.56.1.1 (A:) Hypothetical protein HI0510 {Haemophilus
influenzae [TaxId: 727]}
Length = 231
Score = 25.7 bits (56), Expect = 5.1
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 170 CMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGP 228
+ +K V + + K + P L + I V+E D R Y++ P
Sbjct: 148 AQSSFAQEKLPVKMTVEFTEQAKSAVKKREEKRPHLSRF--IRQVLEQDPRPAYQQGKP 204
>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase
domain {Thermus thermophilus [TaxId: 274]}
Length = 182
Score = 25.5 bits (55), Expect = 5.8
Identities = 14/98 (14%), Positives = 26/98 (26%), Gaps = 10/98 (10%)
Query: 143 CLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISY 202
L L+ + PG +D G + ++ G V +D P+ +
Sbjct: 10 ALDLLAVR--PGGVYVDATLGGAGHA---RGILERGGRVIGLDQDPEAVARAKGLHLPGL 64
Query: 203 PKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKH 240
+ ++ D I GV
Sbjct: 65 TVVQGNFR-----HLKRHLAALGVERVDGILADLGVSS 97
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the
r1128 polyketide biosynthetic pathway {Streptomyces sp.
r1128 [TaxId: 140437]}
Length = 153
Score = 25.0 bits (54), Expect = 7.6
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 139 PQAACLQHLSDKLLPGANVLDLGFGSGF 166
A S + G L +GFG+G
Sbjct: 112 ALALDRLVRSGAVPGGGPALMIGFGAGL 139
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.425
Gapped
Lambda K H
0.267 0.0452 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 974,709
Number of extensions: 44357
Number of successful extensions: 181
Number of sequences better than 10.0: 1
Number of HSP's gapped: 181
Number of HSP's successfully gapped: 66
Length of query: 254
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 171
Effective length of database: 1,268,006
Effective search space: 216829026
Effective search space used: 216829026
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.5 bits)