Query psy4251
Match_columns 292
No_of_seqs 167 out of 1944
Neff 9.4
Searched_HMMs 46136
Date Fri Aug 16 20:39:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4251.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4251hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1208|consensus 100.0 7.3E-43 1.6E-47 303.5 23.2 245 19-287 29-284 (314)
2 COG0300 DltE Short-chain dehyd 100.0 5E-37 1.1E-41 258.0 22.6 211 22-271 3-218 (265)
3 COG4221 Short-chain alcohol de 100.0 8.7E-37 1.9E-41 249.6 21.1 213 22-271 3-220 (246)
4 PRK05854 short chain dehydroge 100.0 2.2E-36 4.8E-41 266.7 25.2 246 19-286 8-271 (313)
5 KOG1205|consensus 100.0 3.3E-37 7.2E-42 261.0 17.9 192 20-243 7-205 (282)
6 KOG1201|consensus 100.0 4.1E-36 9E-41 252.0 21.0 202 7-242 20-229 (300)
7 KOG1200|consensus 100.0 5.7E-35 1.2E-39 228.6 13.9 223 22-283 11-248 (256)
8 PRK08339 short chain dehydroge 100.0 6.4E-34 1.4E-38 245.2 21.0 230 21-283 4-252 (263)
9 PRK08303 short chain dehydroge 100.0 7.6E-34 1.6E-38 249.4 20.4 238 21-289 4-270 (305)
10 PRK06197 short chain dehydroge 100.0 3.5E-33 7.6E-38 245.8 24.7 245 20-286 11-265 (306)
11 PRK07063 short chain dehydroge 100.0 5.3E-33 1.1E-37 239.0 23.4 240 22-292 4-258 (260)
12 PRK12481 2-deoxy-D-gluconate 3 100.0 2.9E-33 6.3E-38 239.5 20.7 228 21-283 4-242 (251)
13 PRK06079 enoyl-(acyl carrier p 100.0 2.3E-33 5.1E-38 240.2 19.7 221 22-283 4-243 (252)
14 PRK06505 enoyl-(acyl carrier p 100.0 3.5E-33 7.5E-38 241.5 20.1 223 22-283 4-245 (271)
15 PRK06196 oxidoreductase; Provi 100.0 2.4E-32 5.1E-37 241.4 25.0 241 21-286 22-274 (315)
16 PLN02730 enoyl-[acyl-carrier-p 100.0 5.1E-33 1.1E-37 242.5 20.0 228 20-283 4-280 (303)
17 PRK07533 enoyl-(acyl carrier p 100.0 8.6E-33 1.9E-37 237.5 20.4 227 19-283 4-248 (258)
18 PRK08415 enoyl-(acyl carrier p 100.0 9.4E-33 2E-37 239.1 20.7 227 22-283 2-243 (274)
19 PRK06603 enoyl-(acyl carrier p 100.0 1E-32 2.2E-37 237.4 20.4 224 21-283 4-246 (260)
20 PRK07370 enoyl-(acyl carrier p 100.0 1.1E-32 2.3E-37 236.9 20.5 230 22-289 3-254 (258)
21 PRK08416 7-alpha-hydroxysteroi 100.0 1.4E-32 3E-37 236.5 20.1 236 20-290 3-259 (260)
22 PRK07478 short chain dehydroge 100.0 3E-32 6.5E-37 233.5 22.0 226 22-283 3-243 (254)
23 PRK08690 enoyl-(acyl carrier p 100.0 1.3E-32 2.9E-37 236.8 19.8 224 22-283 3-246 (261)
24 PRK08594 enoyl-(acyl carrier p 100.0 1.4E-32 3.1E-37 236.0 19.5 224 22-283 4-247 (257)
25 PRK05867 short chain dehydroge 100.0 4.1E-32 8.9E-37 232.6 22.1 234 21-289 5-251 (253)
26 KOG4169|consensus 100.0 2E-33 4.3E-38 225.5 12.7 213 22-271 2-223 (261)
27 PRK08589 short chain dehydroge 100.0 4.9E-32 1.1E-36 234.6 22.0 187 22-243 3-195 (272)
28 PRK07791 short chain dehydroge 100.0 3.5E-32 7.6E-37 237.1 20.7 188 22-241 3-208 (286)
29 PRK07889 enoyl-(acyl carrier p 100.0 2.2E-32 4.7E-37 234.8 19.0 220 22-283 4-245 (256)
30 PRK07984 enoyl-(acyl carrier p 100.0 3.3E-32 7.2E-37 234.2 19.8 222 23-283 4-245 (262)
31 PRK07062 short chain dehydroge 100.0 6.6E-32 1.4E-36 232.8 21.4 191 21-242 4-199 (265)
32 PRK06997 enoyl-(acyl carrier p 100.0 6E-32 1.3E-36 232.5 20.3 224 22-283 3-245 (260)
33 PRK08993 2-deoxy-D-gluconate 3 100.0 8.3E-32 1.8E-36 230.7 20.5 229 20-283 5-244 (253)
34 PRK08159 enoyl-(acyl carrier p 100.0 7.7E-32 1.7E-36 233.2 20.4 226 21-283 6-248 (272)
35 PRK06139 short chain dehydroge 100.0 2.2E-31 4.8E-36 235.9 23.2 189 21-242 3-197 (330)
36 PRK06114 short chain dehydroge 100.0 2E-31 4.3E-36 228.5 21.6 230 21-283 4-245 (254)
37 PRK12859 3-ketoacyl-(acyl-carr 100.0 3.6E-31 7.7E-36 227.2 22.5 223 22-283 3-249 (256)
38 TIGR01289 LPOR light-dependent 100.0 6E-31 1.3E-35 232.2 23.0 247 24-284 2-278 (314)
39 PLN02780 ketoreductase/ oxidor 100.0 2.6E-31 5.7E-36 234.7 20.0 186 24-241 52-247 (320)
40 KOG0725|consensus 100.0 4.4E-31 9.6E-36 226.5 20.7 189 20-239 3-201 (270)
41 PRK05599 hypothetical protein; 100.0 6.2E-31 1.3E-35 224.4 21.0 199 26-271 1-205 (246)
42 PRK08862 short chain dehydroge 100.0 6.1E-31 1.3E-35 221.7 20.7 181 22-238 2-190 (227)
43 PRK05876 short chain dehydroge 100.0 6.4E-31 1.4E-35 227.9 21.3 188 22-242 3-196 (275)
44 PRK05872 short chain dehydroge 100.0 4E-31 8.6E-36 231.6 19.9 189 20-243 4-197 (296)
45 PRK07097 gluconate 5-dehydroge 100.0 1.1E-30 2.5E-35 225.2 22.4 239 21-292 6-261 (265)
46 PRK12747 short chain dehydroge 100.0 1.1E-30 2.3E-35 223.7 21.9 225 23-283 2-244 (252)
47 PRK07831 short chain dehydroge 100.0 1.5E-30 3.2E-35 224.0 22.8 228 21-283 13-255 (262)
48 PRK08085 gluconate 5-dehydroge 100.0 1.4E-30 3E-35 223.2 21.9 226 21-282 5-243 (254)
49 PRK07453 protochlorophyllide o 100.0 1.5E-30 3.2E-35 230.6 22.8 249 22-285 3-283 (322)
50 PRK09242 tropinone reductase; 100.0 1.8E-30 3.8E-35 222.9 22.2 236 21-290 5-255 (257)
51 PLN00015 protochlorophyllide r 100.0 9.6E-31 2.1E-35 230.4 20.9 240 30-284 1-274 (308)
52 PRK06113 7-alpha-hydroxysteroi 100.0 2E-30 4.4E-35 222.4 22.3 228 21-283 7-244 (255)
53 PRK07035 short chain dehydroge 100.0 2E-30 4.3E-35 221.9 22.3 227 21-283 4-244 (252)
54 PRK08277 D-mannonate oxidoredu 100.0 3.2E-30 7E-35 223.8 22.7 230 21-283 6-266 (278)
55 PRK06935 2-deoxy-D-gluconate 3 100.0 2.3E-30 5E-35 222.3 21.5 227 21-283 11-249 (258)
56 PRK08265 short chain dehydroge 100.0 3.6E-30 7.8E-35 221.6 22.4 224 22-283 3-238 (261)
57 COG3967 DltE Short-chain dehyd 100.0 1E-30 2.2E-35 206.7 16.9 182 22-238 2-188 (245)
58 PRK06172 short chain dehydroge 100.0 4.7E-30 1E-34 219.7 22.5 228 21-283 3-244 (253)
59 PRK05866 short chain dehydroge 100.0 8.4E-30 1.8E-34 222.8 24.0 195 16-242 31-232 (293)
60 TIGR01832 kduD 2-deoxy-D-gluco 100.0 3.2E-30 6.9E-35 220.1 20.7 225 22-283 2-239 (248)
61 PRK06463 fabG 3-ketoacyl-(acyl 100.0 5.1E-30 1.1E-34 219.9 21.8 226 21-283 3-241 (255)
62 PRK07985 oxidoreductase; Provi 100.0 4.2E-30 9.1E-35 224.9 21.2 224 22-283 46-285 (294)
63 PRK08340 glucose-1-dehydrogena 100.0 5.1E-30 1.1E-34 220.4 21.4 223 27-283 2-247 (259)
64 TIGR01500 sepiapter_red sepiap 100.0 6.9E-30 1.5E-34 219.2 22.1 230 29-283 3-252 (256)
65 PRK08643 acetoin reductase; Va 100.0 7.3E-30 1.6E-34 218.9 21.9 232 25-289 2-254 (256)
66 PRK06128 oxidoreductase; Provi 100.0 4.2E-30 9E-35 225.6 20.5 185 22-241 52-244 (300)
67 PRK08278 short chain dehydroge 100.0 7.2E-30 1.6E-34 221.2 21.2 226 22-288 3-247 (273)
68 KOG1611|consensus 100.0 7.4E-30 1.6E-34 204.9 18.7 214 26-284 4-241 (249)
69 PRK07523 gluconate 5-dehydroge 100.0 1.4E-29 3.1E-34 217.0 21.4 226 21-282 6-244 (255)
70 PRK07109 short chain dehydroge 100.0 1.6E-29 3.5E-34 224.7 22.2 189 21-242 4-199 (334)
71 PRK06200 2,3-dihydroxy-2,3-dih 100.0 1.8E-29 3.9E-34 217.4 21.6 182 22-241 3-194 (263)
72 PRK08936 glucose-1-dehydrogena 100.0 1.9E-29 4.1E-34 217.0 21.5 228 21-283 3-244 (261)
73 PRK06124 gluconate 5-dehydroge 100.0 3E-29 6.5E-34 215.1 22.7 235 20-290 6-254 (256)
74 PRK06484 short chain dehydroge 100.0 1.2E-29 2.6E-34 238.8 21.7 222 22-283 266-501 (520)
75 PRK07825 short chain dehydroge 100.0 2.2E-29 4.9E-34 218.0 21.6 185 22-243 2-191 (273)
76 PRK07677 short chain dehydroge 100.0 3.3E-29 7.1E-34 214.5 22.0 223 25-283 1-239 (252)
77 PRK12743 oxidoreductase; Provi 100.0 3.2E-29 6.9E-34 215.1 21.8 185 25-242 2-193 (256)
78 PRK07792 fabG 3-ketoacyl-(acyl 100.0 5.1E-29 1.1E-33 219.2 23.4 189 20-241 7-206 (306)
79 PLN02253 xanthoxin dehydrogena 100.0 2.4E-29 5.1E-34 218.6 20.8 190 18-241 11-207 (280)
80 PRK06125 short chain dehydroge 100.0 3.6E-29 7.8E-34 215.1 21.3 226 22-283 4-247 (259)
81 PRK06300 enoyl-(acyl carrier p 100.0 2.9E-30 6.2E-35 225.1 14.5 227 21-283 4-279 (299)
82 PRK06841 short chain dehydroge 100.0 5.1E-29 1.1E-33 213.5 21.8 225 21-283 11-246 (255)
83 PRK08063 enoyl-(acyl carrier p 100.0 7.7E-29 1.7E-33 211.7 22.8 188 23-243 2-195 (250)
84 PRK06398 aldose dehydrogenase; 100.0 1.7E-29 3.8E-34 217.0 18.4 177 21-242 2-183 (258)
85 PRK12823 benD 1,6-dihydroxycyc 100.0 4.4E-29 9.5E-34 214.6 20.7 184 21-240 4-193 (260)
86 PRK08642 fabG 3-ketoacyl-(acyl 100.0 6E-29 1.3E-33 212.7 21.4 222 22-283 2-244 (253)
87 PRK05717 oxidoreductase; Valid 100.0 7.2E-29 1.6E-33 212.7 21.7 185 19-241 4-195 (255)
88 PRK12748 3-ketoacyl-(acyl-carr 100.0 1.5E-28 3.3E-33 210.8 22.2 223 22-283 2-248 (256)
89 PRK12938 acetyacetyl-CoA reduc 100.0 1.2E-28 2.7E-33 210.0 21.4 187 23-242 1-193 (246)
90 PRK05855 short chain dehydroge 100.0 1E-28 2.2E-33 235.2 23.1 190 21-243 311-506 (582)
91 PRK08251 short chain dehydroge 100.0 2.2E-28 4.7E-33 208.7 22.7 203 25-271 2-209 (248)
92 PRK07774 short chain dehydroge 100.0 1.2E-28 2.7E-33 210.4 20.8 212 22-271 3-222 (250)
93 PRK07024 short chain dehydroge 100.0 7.7E-29 1.7E-33 212.8 19.6 184 25-242 2-191 (257)
94 PRK08226 short chain dehydroge 100.0 3E-28 6.4E-33 209.7 23.2 229 22-283 3-247 (263)
95 PRK06940 short chain dehydroge 100.0 1.4E-28 3E-33 213.3 21.3 234 25-283 2-257 (275)
96 PRK09186 flagellin modificatio 100.0 2.3E-28 4.9E-33 209.5 22.2 233 23-283 2-248 (256)
97 PF13561 adh_short_C2: Enoyl-( 100.0 1.8E-29 3.9E-34 214.7 15.2 213 39-283 3-234 (241)
98 TIGR03325 BphB_TodD cis-2,3-di 100.0 9.9E-29 2.2E-33 212.7 20.0 182 22-241 2-193 (262)
99 PRK06949 short chain dehydroge 100.0 2.3E-28 5E-33 209.7 22.1 230 21-283 5-251 (258)
100 PRK07904 short chain dehydroge 100.0 6.8E-29 1.5E-33 212.7 18.7 202 23-271 6-214 (253)
101 PRK12939 short chain dehydroge 100.0 2.3E-28 5.1E-33 208.6 21.9 227 22-283 4-241 (250)
102 PRK06484 short chain dehydroge 100.0 1.3E-28 2.9E-33 231.7 22.0 185 23-243 3-195 (520)
103 PRK12937 short chain dehydroge 100.0 2.4E-28 5.1E-33 208.0 21.0 185 22-241 2-192 (245)
104 PRK05650 short chain dehydroge 100.0 4E-28 8.6E-33 209.9 22.3 185 26-243 1-190 (270)
105 KOG1610|consensus 100.0 1E-28 2.3E-33 208.2 17.5 185 21-241 25-217 (322)
106 PRK06138 short chain dehydroge 100.0 8.6E-28 1.9E-32 205.4 23.5 188 22-243 2-194 (252)
107 PRK12935 acetoacetyl-CoA reduc 100.0 3.6E-28 7.8E-33 207.3 21.1 214 22-271 3-222 (247)
108 PRK07231 fabG 3-ketoacyl-(acyl 100.0 5.2E-28 1.1E-32 206.5 22.0 188 22-243 2-195 (251)
109 KOG1207|consensus 100.0 1.1E-29 2.3E-34 195.7 10.1 186 21-246 3-194 (245)
110 PRK07576 short chain dehydroge 100.0 5.4E-28 1.2E-32 208.4 21.9 183 21-237 5-191 (264)
111 PRK06701 short chain dehydroge 100.0 5.8E-28 1.3E-32 210.9 21.7 188 20-242 41-235 (290)
112 PRK08703 short chain dehydroge 100.0 8.8E-28 1.9E-32 204.0 22.3 219 21-282 2-236 (239)
113 PRK08213 gluconate 5-dehydroge 100.0 8.3E-28 1.8E-32 206.5 22.3 194 21-243 8-207 (259)
114 PRK08628 short chain dehydroge 100.0 8.1E-28 1.8E-32 206.5 21.8 187 21-242 3-193 (258)
115 PRK07814 short chain dehydroge 100.0 8.4E-28 1.8E-32 207.1 21.8 187 22-242 7-199 (263)
116 PRK06947 glucose-1-dehydrogena 100.0 8.1E-28 1.8E-32 205.2 20.9 226 26-283 3-242 (248)
117 PRK05993 short chain dehydroge 100.0 3.9E-28 8.4E-33 210.7 18.9 180 24-242 3-188 (277)
118 PRK07067 sorbitol dehydrogenas 100.0 7.5E-28 1.6E-32 206.6 20.3 185 22-242 3-193 (257)
119 PRK09072 short chain dehydroge 100.0 1.1E-27 2.3E-32 206.3 21.1 186 22-242 2-192 (263)
120 TIGR02415 23BDH acetoin reduct 100.0 1.5E-27 3.2E-32 204.3 21.8 184 26-242 1-190 (254)
121 PRK07856 short chain dehydroge 100.0 1.1E-27 2.3E-32 205.1 20.6 218 21-283 2-233 (252)
122 PRK06182 short chain dehydroge 100.0 8.3E-28 1.8E-32 208.2 19.9 179 24-241 2-185 (273)
123 PRK06523 short chain dehydroge 100.0 7.9E-28 1.7E-32 206.7 19.5 181 21-242 5-192 (260)
124 TIGR03206 benzo_BadH 2-hydroxy 100.0 1.8E-27 3.9E-32 203.2 21.4 228 23-283 1-242 (250)
125 PRK12936 3-ketoacyl-(acyl-carr 100.0 2.1E-27 4.5E-32 202.1 21.1 185 22-242 3-192 (245)
126 PRK07890 short chain dehydroge 100.0 1.6E-27 3.5E-32 204.5 20.5 186 22-241 2-193 (258)
127 PRK06123 short chain dehydroge 100.0 2.3E-27 4.9E-32 202.4 21.2 187 25-241 2-196 (248)
128 PRK12384 sorbitol-6-phosphate 100.0 1.7E-27 3.6E-32 204.6 20.4 186 25-241 2-194 (259)
129 PRK07666 fabG 3-ketoacyl-(acyl 100.0 4E-27 8.6E-32 199.9 22.5 189 21-242 3-196 (239)
130 PRK06194 hypothetical protein; 100.0 2E-27 4.4E-32 207.2 21.2 190 22-242 3-203 (287)
131 PRK09134 short chain dehydroge 100.0 4.5E-27 9.8E-32 201.9 22.8 185 21-239 5-195 (258)
132 TIGR02685 pter_reduc_Leis pter 100.0 3.8E-27 8.2E-32 203.4 22.3 182 26-237 2-207 (267)
133 PRK12744 short chain dehydroge 100.0 1.6E-27 3.4E-32 204.7 19.5 185 21-241 4-198 (257)
134 TIGR01831 fabG_rel 3-oxoacyl-( 100.0 2.7E-27 5.8E-32 200.9 20.2 217 30-282 2-231 (239)
135 PRK06171 sorbitol-6-phosphate 100.0 1E-27 2.2E-32 206.8 17.9 175 21-237 5-192 (266)
136 KOG1209|consensus 100.0 3.8E-28 8.2E-33 193.0 13.7 180 25-242 7-192 (289)
137 PRK06057 short chain dehydroge 100.0 3.7E-27 8.1E-32 202.1 20.9 185 22-243 4-195 (255)
138 PRK07832 short chain dehydroge 100.0 5E-27 1.1E-31 203.2 21.9 185 26-242 1-191 (272)
139 PRK08267 short chain dehydroge 100.0 4.6E-27 9.9E-32 202.0 21.4 182 26-242 2-189 (260)
140 PRK05875 short chain dehydroge 100.0 7.1E-27 1.5E-31 202.6 22.6 190 22-242 4-199 (276)
141 PRK07454 short chain dehydroge 100.0 3.9E-27 8.4E-32 200.2 20.5 185 24-241 5-194 (241)
142 PRK08945 putative oxoacyl-(acy 100.0 7.4E-27 1.6E-31 199.2 22.2 220 21-283 8-241 (247)
143 PRK06483 dihydromonapterin red 100.0 2.6E-27 5.7E-32 200.7 18.7 176 25-239 2-184 (236)
144 PRK06500 short chain dehydroge 100.0 4E-27 8.7E-32 200.9 19.7 183 22-242 3-190 (249)
145 PRK06180 short chain dehydroge 100.0 4.8E-27 1E-31 203.9 20.2 182 24-241 3-189 (277)
146 PRK13394 3-hydroxybutyrate deh 100.0 4.6E-27 1E-31 202.0 19.8 188 22-242 4-197 (262)
147 PRK07201 short chain dehydroge 100.0 5.7E-27 1.2E-31 226.5 22.5 190 20-242 366-562 (657)
148 PRK06179 short chain dehydroge 100.0 3.5E-27 7.6E-32 203.9 18.6 179 24-243 3-186 (270)
149 PRK07069 short chain dehydroge 100.0 1.4E-26 3E-31 197.8 21.7 184 28-242 2-193 (251)
150 PRK08263 short chain dehydroge 100.0 8.1E-27 1.8E-31 202.2 20.5 182 24-241 2-188 (275)
151 PRK05884 short chain dehydroge 100.0 7E-27 1.5E-31 196.5 19.3 194 27-283 2-212 (223)
152 PRK05565 fabG 3-ketoacyl-(acyl 100.0 1.8E-26 3.9E-31 196.5 21.9 226 22-283 2-239 (247)
153 PRK12746 short chain dehydroge 100.0 1.7E-26 3.7E-31 197.7 21.8 188 21-243 2-201 (254)
154 PRK08217 fabG 3-ketoacyl-(acyl 100.0 1.3E-26 2.8E-31 198.1 20.9 213 22-271 2-229 (253)
155 PRK10538 malonic semialdehyde 100.0 2.1E-26 4.6E-31 196.6 22.0 178 27-240 2-185 (248)
156 PRK07102 short chain dehydroge 100.0 1.3E-26 2.8E-31 197.2 20.6 198 26-271 2-204 (243)
157 PRK07775 short chain dehydroge 100.0 2E-26 4.3E-31 199.7 22.1 188 21-241 6-198 (274)
158 PRK12742 oxidoreductase; Provi 100.0 1.5E-26 3.3E-31 195.9 20.7 214 22-283 3-229 (237)
159 PRK12827 short chain dehydroge 100.0 2.9E-26 6.4E-31 195.4 22.5 188 22-242 3-200 (249)
160 PRK06198 short chain dehydroge 100.0 2.3E-26 4.9E-31 197.6 21.5 186 22-240 3-195 (260)
161 TIGR01829 AcAcCoA_reduct aceto 100.0 2.4E-26 5.2E-31 195.2 21.4 185 26-243 1-191 (242)
162 PF00106 adh_short: short chai 100.0 4.8E-27 1E-31 188.4 16.1 162 26-221 1-166 (167)
163 PRK12429 3-hydroxybutyrate deh 100.0 1.6E-26 3.5E-31 198.1 20.3 187 23-242 2-193 (258)
164 PRK12745 3-ketoacyl-(acyl-carr 100.0 1.8E-26 4E-31 197.7 20.6 186 26-242 3-200 (256)
165 PRK08220 2,3-dihydroxybenzoate 99.9 1.7E-26 3.7E-31 197.4 20.1 180 21-242 4-188 (252)
166 PRK06914 short chain dehydroge 99.9 2.1E-26 4.5E-31 200.1 20.7 187 24-242 2-193 (280)
167 PRK12824 acetoacetyl-CoA reduc 99.9 2.5E-26 5.4E-31 195.4 20.7 185 26-243 3-193 (245)
168 KOG1014|consensus 99.9 1.4E-26 3.1E-31 195.2 18.6 204 21-271 45-255 (312)
169 KOG1199|consensus 99.9 2.3E-28 5.1E-33 188.1 7.2 214 22-271 6-234 (260)
170 PRK05693 short chain dehydroge 99.9 1.6E-26 3.4E-31 200.3 19.6 178 26-243 2-184 (274)
171 TIGR02632 RhaD_aldol-ADH rhamn 99.9 2.3E-26 5E-31 221.2 22.5 187 20-237 409-600 (676)
172 COG1028 FabG Dehydrogenases wi 99.9 1.6E-26 3.6E-31 197.5 19.0 186 22-244 2-198 (251)
173 PRK06550 fabG 3-ketoacyl-(acyl 99.9 1.5E-26 3.3E-31 195.8 17.1 218 22-290 2-234 (235)
174 PRK12826 3-ketoacyl-(acyl-carr 99.9 9.6E-26 2.1E-30 192.4 22.1 190 21-243 2-197 (251)
175 PRK09730 putative NAD(P)-bindi 99.9 8.4E-26 1.8E-30 192.4 21.0 186 26-241 2-195 (247)
176 PRK06482 short chain dehydroge 99.9 6.9E-26 1.5E-30 196.4 20.6 181 26-242 3-188 (276)
177 PRK06181 short chain dehydroge 99.9 1.3E-25 2.9E-30 193.2 21.9 184 25-242 1-190 (263)
178 PRK05557 fabG 3-ketoacyl-(acyl 99.9 3.2E-25 7E-30 188.7 22.1 189 22-243 2-196 (248)
179 PRK06101 short chain dehydroge 99.9 9.7E-26 2.1E-30 191.6 18.5 191 26-271 2-197 (240)
180 PRK07074 short chain dehydroge 99.9 3.4E-25 7.5E-30 190.0 21.3 221 25-283 2-235 (257)
181 PRK09009 C factor cell-cell si 99.9 8.5E-26 1.8E-30 191.3 17.0 207 26-283 1-226 (235)
182 PRK06077 fabG 3-ketoacyl-(acyl 99.9 3.4E-25 7.4E-30 189.3 20.9 185 22-242 3-193 (252)
183 PRK08261 fabG 3-ketoacyl-(acyl 99.9 1.6E-25 3.4E-30 207.2 20.1 226 21-283 206-440 (450)
184 TIGR01963 PHB_DH 3-hydroxybuty 99.9 7.3E-25 1.6E-29 187.5 21.8 184 25-241 1-189 (255)
185 PRK05653 fabG 3-ketoacyl-(acyl 99.9 7.6E-25 1.6E-29 186.2 21.3 188 22-242 2-194 (246)
186 KOG1210|consensus 99.9 5.4E-25 1.2E-29 185.4 19.3 214 26-271 34-251 (331)
187 PRK07578 short chain dehydroge 99.9 1.9E-25 4.1E-30 184.5 16.3 156 27-240 2-162 (199)
188 PRK07326 short chain dehydroge 99.9 1.3E-24 2.8E-29 184.2 21.6 185 23-242 4-193 (237)
189 PRK07060 short chain dehydroge 99.9 9.5E-25 2.1E-29 185.8 20.5 219 21-283 5-236 (245)
190 PRK08177 short chain dehydroge 99.9 4.8E-25 1E-29 185.5 18.5 179 26-242 2-187 (225)
191 PRK12825 fabG 3-ketoacyl-(acyl 99.9 2.1E-24 4.6E-29 183.6 22.6 188 23-243 4-197 (249)
192 PRK07577 short chain dehydroge 99.9 6.3E-25 1.4E-29 185.7 18.6 173 24-242 2-179 (234)
193 PRK06924 short chain dehydroge 99.9 9.9E-25 2.2E-29 186.5 19.3 181 26-242 2-196 (251)
194 PRK12828 short chain dehydroge 99.9 2.1E-24 4.5E-29 182.8 21.1 185 22-241 4-193 (239)
195 PRK09291 short chain dehydroge 99.9 1.1E-24 2.5E-29 186.7 18.8 179 25-242 2-185 (257)
196 PRK09135 pteridine reductase; 99.9 7.6E-24 1.7E-28 180.5 21.9 185 23-241 4-194 (249)
197 PRK07806 short chain dehydroge 99.9 3.9E-24 8.3E-29 182.5 19.1 187 22-242 3-193 (248)
198 TIGR01830 3oxo_ACP_reduc 3-oxo 99.9 6E-24 1.3E-28 180.0 20.0 181 30-242 2-188 (239)
199 PRK08324 short chain dehydroge 99.9 4.6E-24 9.9E-29 206.1 21.6 188 20-241 417-612 (681)
200 PRK05786 fabG 3-ketoacyl-(acyl 99.9 1.2E-23 2.6E-28 178.3 21.7 184 22-240 2-188 (238)
201 PRK12829 short chain dehydroge 99.9 1E-23 2.2E-28 181.4 21.2 188 21-242 7-200 (264)
202 KOG1478|consensus 99.9 1.6E-24 3.4E-29 176.6 13.9 198 26-242 4-237 (341)
203 PRK12367 short chain dehydroge 99.9 3.7E-24 8E-29 182.2 16.9 174 20-239 9-190 (245)
204 PRK07023 short chain dehydroge 99.9 3.1E-24 6.8E-29 182.6 16.3 176 27-241 3-188 (243)
205 PRK08264 short chain dehydroge 99.9 1.4E-23 3.1E-28 177.9 19.2 177 22-242 3-186 (238)
206 KOG1204|consensus 99.9 9.1E-25 2E-29 175.7 9.1 191 21-243 1-198 (253)
207 PRK07041 short chain dehydroge 99.9 2.1E-23 4.6E-28 175.9 16.9 170 30-242 1-175 (230)
208 COG0623 FabI Enoyl-[acyl-carri 99.9 1.1E-22 2.3E-27 164.0 18.6 226 21-281 2-242 (259)
209 PRK06953 short chain dehydroge 99.9 1.7E-22 3.7E-27 169.7 18.6 176 26-242 2-184 (222)
210 PRK08017 oxidoreductase; Provi 99.9 2.2E-22 4.9E-27 172.3 19.0 178 26-242 3-186 (256)
211 PRK12428 3-alpha-hydroxysteroi 99.9 2.1E-21 4.6E-26 165.1 14.6 205 52-283 2-224 (241)
212 TIGR02813 omega_3_PfaA polyket 99.9 4.8E-21 1E-25 202.2 19.4 178 24-241 1996-2226(2582)
213 PRK08219 short chain dehydroge 99.9 1.9E-20 4.2E-25 157.3 18.6 176 25-242 3-181 (227)
214 smart00822 PKS_KR This enzymat 99.8 7.3E-20 1.6E-24 147.3 15.5 171 26-237 1-179 (180)
215 PRK07424 bifunctional sterol d 99.8 1.7E-19 3.6E-24 162.8 18.7 172 21-239 174-350 (406)
216 TIGR03589 PseB UDP-N-acetylglu 99.8 4.4E-18 9.6E-23 150.9 17.1 164 23-237 2-169 (324)
217 COG1086 Predicted nucleoside-d 99.8 3.9E-18 8.6E-23 154.6 16.1 219 21-283 246-474 (588)
218 PF08659 KR: KR domain; Inter 99.8 5.3E-18 1.2E-22 137.8 13.2 171 27-235 2-177 (181)
219 PRK13656 trans-2-enoyl-CoA red 99.8 4.6E-17 1E-21 143.6 16.9 185 24-246 40-284 (398)
220 TIGR02622 CDP_4_6_dhtase CDP-g 99.8 4E-17 8.7E-22 146.3 17.0 183 23-237 2-190 (349)
221 PLN02989 cinnamyl-alcohol dehy 99.7 1.7E-16 3.7E-21 140.8 17.7 189 24-240 4-199 (325)
222 PRK06720 hypothetical protein; 99.7 3E-16 6.6E-21 125.7 16.7 141 21-176 12-162 (169)
223 PLN03209 translocon at the inn 99.7 2.7E-16 5.8E-21 145.7 17.9 172 23-241 78-259 (576)
224 PF02719 Polysacc_synt_2: Poly 99.7 1.3E-17 2.8E-22 142.4 7.2 211 30-283 2-226 (293)
225 PLN02653 GDP-mannose 4,6-dehyd 99.7 8.6E-16 1.9E-20 137.2 15.8 188 21-235 2-197 (340)
226 PLN02986 cinnamyl-alcohol dehy 99.6 1.1E-14 2.4E-19 129.1 18.1 189 23-240 3-198 (322)
227 PLN02214 cinnamoyl-CoA reducta 99.6 1.5E-14 3.2E-19 129.3 18.1 182 22-239 7-195 (342)
228 PLN02583 cinnamoyl-CoA reducta 99.6 3.2E-14 6.9E-19 124.7 18.2 182 24-239 5-197 (297)
229 PLN02650 dihydroflavonol-4-red 99.6 3.1E-14 6.7E-19 127.7 17.4 189 24-240 4-198 (351)
230 TIGR01181 dTDP_gluc_dehyt dTDP 99.6 1.2E-14 2.6E-19 128.1 14.3 175 28-237 2-181 (317)
231 PLN02240 UDP-glucose 4-epimera 99.6 4.9E-14 1.1E-18 126.3 17.6 180 22-234 2-185 (352)
232 PLN02572 UDP-sulfoquinovose sy 99.6 5.9E-14 1.3E-18 129.3 18.4 195 19-237 41-259 (442)
233 PRK10217 dTDP-glucose 4,6-dehy 99.6 2.7E-14 5.9E-19 128.2 15.7 184 26-237 2-191 (355)
234 PLN02896 cinnamyl-alcohol dehy 99.6 8.8E-14 1.9E-18 124.9 18.3 189 23-239 8-210 (353)
235 TIGR01472 gmd GDP-mannose 4,6- 99.6 3.4E-14 7.3E-19 127.1 15.2 168 26-222 1-175 (343)
236 PLN00198 anthocyanidin reducta 99.6 1.5E-13 3.4E-18 122.5 17.8 187 24-239 8-202 (338)
237 PRK10084 dTDP-glucose 4,6 dehy 99.6 1.5E-13 3.2E-18 123.3 16.1 187 27-237 2-198 (352)
238 PLN02662 cinnamyl-alcohol dehy 99.5 2.4E-13 5.1E-18 120.4 15.8 187 24-240 3-197 (322)
239 COG1088 RfbB dTDP-D-glucose 4, 99.5 3.3E-13 7.2E-18 113.5 14.1 179 27-237 2-183 (340)
240 PRK10675 UDP-galactose-4-epime 99.5 2.2E-12 4.8E-17 115.0 16.3 177 27-236 2-180 (338)
241 PRK15181 Vi polysaccharide bio 99.5 2.2E-12 4.8E-17 115.6 15.7 181 21-237 11-196 (348)
242 TIGR01179 galE UDP-glucose-4-e 99.5 2.2E-12 4.7E-17 114.2 15.2 174 28-237 2-177 (328)
243 KOG1502|consensus 99.4 4.2E-12 9E-17 109.8 15.5 185 24-242 5-201 (327)
244 PLN02686 cinnamoyl-CoA reducta 99.4 8.7E-12 1.9E-16 112.5 18.4 190 21-239 49-250 (367)
245 PLN00141 Tic62-NAD(P)-related 99.4 6.2E-12 1.3E-16 107.5 15.5 170 21-239 13-187 (251)
246 TIGR03466 HpnA hopanoid-associ 99.4 4.9E-12 1.1E-16 112.0 15.3 169 27-237 2-172 (328)
247 PF01073 3Beta_HSD: 3-beta hyd 99.4 2.6E-12 5.7E-17 111.4 11.9 179 30-239 1-185 (280)
248 PF01370 Epimerase: NAD depend 99.4 1.7E-11 3.7E-16 103.4 13.4 170 30-239 2-174 (236)
249 PLN02260 probable rhamnose bio 99.3 2.1E-11 4.6E-16 118.4 14.7 185 22-237 3-190 (668)
250 COG1087 GalE UDP-glucose 4-epi 99.3 2E-11 4.3E-16 103.3 12.5 158 27-222 2-161 (329)
251 PLN02657 3,8-divinyl protochlo 99.3 4.2E-11 9.1E-16 108.8 15.0 162 21-237 56-221 (390)
252 PLN02427 UDP-apiose/xylose syn 99.3 6.8E-11 1.5E-15 107.5 16.0 188 21-239 10-216 (386)
253 TIGR01746 Thioester-redct thio 99.3 4.8E-11 1E-15 107.1 14.4 180 28-238 2-197 (367)
254 PRK11150 rfaD ADP-L-glycero-D- 99.2 1.5E-10 3.3E-15 101.9 13.3 165 30-237 3-171 (308)
255 TIGR02197 heptose_epim ADP-L-g 99.2 2.7E-10 5.8E-15 100.4 14.0 167 30-237 2-171 (314)
256 PRK11908 NAD-dependent epimera 99.2 6.3E-10 1.4E-14 99.7 16.1 175 26-237 2-180 (347)
257 COG0451 WcaG Nucleoside-diphos 99.2 2.2E-10 4.8E-15 100.8 12.6 169 28-237 3-173 (314)
258 PRK08125 bifunctional UDP-gluc 99.2 4.1E-10 8.9E-15 109.1 15.4 177 23-237 313-494 (660)
259 TIGR01214 rmlD dTDP-4-dehydror 99.2 5.5E-10 1.2E-14 97.2 14.1 150 28-237 2-151 (287)
260 KOG1371|consensus 99.2 7.3E-10 1.6E-14 94.8 13.8 168 25-222 2-172 (343)
261 PF08643 DUF1776: Fungal famil 99.2 1.5E-09 3.2E-14 93.5 15.7 178 28-238 5-204 (299)
262 PLN02725 GDP-4-keto-6-deoxyman 99.2 3.6E-10 7.8E-15 99.2 12.4 159 30-237 1-161 (306)
263 PLN02695 GDP-D-mannose-3',5'-e 99.2 7.9E-10 1.7E-14 99.9 14.6 178 23-237 19-198 (370)
264 COG1091 RfbD dTDP-4-dehydrorha 99.2 6.6E-10 1.4E-14 94.7 13.1 137 28-218 3-139 (281)
265 PF07993 NAD_binding_4: Male s 99.1 4.6E-10 1E-14 95.9 11.4 177 31-237 1-199 (249)
266 PRK09987 dTDP-4-dehydrorhamnos 99.1 1.2E-09 2.6E-14 95.9 14.0 141 27-219 2-144 (299)
267 PLN02206 UDP-glucuronate decar 99.1 2.5E-09 5.4E-14 98.6 14.0 173 24-237 118-293 (442)
268 PRK07201 short chain dehydroge 99.0 5.2E-09 1.1E-13 101.6 13.9 172 27-237 2-179 (657)
269 PLN02996 fatty acyl-CoA reduct 99.0 6.2E-09 1.3E-13 97.3 13.5 191 23-239 9-268 (491)
270 PLN02166 dTDP-glucose 4,6-dehy 99.0 1.1E-08 2.4E-13 94.2 15.0 173 25-237 120-294 (436)
271 PF04321 RmlD_sub_bind: RmlD s 99.0 1.9E-09 4.2E-14 93.9 9.5 151 27-237 2-152 (286)
272 COG3320 Putative dehydrogenase 99.0 3.2E-08 7E-13 86.8 15.1 186 26-240 1-202 (382)
273 CHL00194 ycf39 Ycf39; Provisio 98.9 3.1E-08 6.8E-13 87.6 13.9 145 27-237 2-148 (317)
274 PLN02778 3,5-epimerase/4-reduc 98.9 6.6E-08 1.4E-12 84.8 14.1 142 26-219 10-157 (298)
275 PF13460 NAD_binding_10: NADH( 98.8 1.4E-07 3.1E-12 76.4 14.0 146 30-239 2-150 (183)
276 PLN02260 probable rhamnose bio 98.8 1.4E-07 3E-12 91.9 16.1 153 25-233 380-539 (668)
277 KOG0747|consensus 98.7 1.1E-07 2.4E-12 79.9 9.7 133 83-237 56-188 (331)
278 PLN02503 fatty acyl-CoA reduct 98.7 6.8E-07 1.5E-11 84.9 14.9 130 23-175 117-272 (605)
279 KOG1430|consensus 98.7 4.1E-07 9E-12 80.5 12.5 177 24-237 3-184 (361)
280 PRK05865 hypothetical protein; 98.7 3.3E-07 7.2E-12 89.9 13.0 101 27-172 2-104 (854)
281 TIGR03443 alpha_am_amid L-amin 98.7 5.8E-07 1.3E-11 94.5 15.8 183 25-237 971-1180(1389)
282 COG1089 Gmd GDP-D-mannose dehy 98.6 1.9E-07 4.1E-12 78.6 9.5 180 25-234 2-189 (345)
283 KOG4022|consensus 98.6 2E-06 4.3E-11 66.6 12.7 176 26-245 4-188 (236)
284 PRK08309 short chain dehydroge 98.5 9.9E-07 2.1E-11 71.2 10.4 82 27-122 2-85 (177)
285 TIGR01777 yfcH conserved hypot 98.5 2.5E-06 5.5E-11 74.1 11.9 95 30-153 2-98 (292)
286 TIGR02114 coaB_strep phosphopa 98.4 9.8E-07 2.1E-11 74.1 7.0 101 26-150 15-117 (227)
287 PRK12548 shikimate 5-dehydroge 98.2 3.2E-06 6.9E-11 73.8 7.3 82 22-123 123-210 (289)
288 PLN00016 RNA-binding protein; 98.2 2.9E-05 6.3E-10 70.5 13.7 149 24-237 51-212 (378)
289 KOG1221|consensus 98.2 1.7E-05 3.8E-10 72.3 11.4 191 22-237 9-237 (467)
290 COG4982 3-oxoacyl-[acyl-carrie 98.2 8.2E-05 1.8E-09 69.1 15.5 192 20-242 391-608 (866)
291 PRK08261 fabG 3-ketoacyl-(acyl 98.2 2.5E-05 5.5E-10 72.5 12.5 66 145-237 102-167 (450)
292 PRK05579 bifunctional phosphop 98.1 6.9E-06 1.5E-10 74.5 7.4 83 21-123 184-278 (399)
293 TIGR03649 ergot_EASG ergot alk 98.1 2.1E-05 4.5E-10 68.4 10.1 103 28-173 2-107 (285)
294 KOG2774|consensus 98.0 9.1E-06 2E-10 66.8 5.1 174 23-237 42-216 (366)
295 KOG1429|consensus 98.0 0.00013 2.8E-09 61.8 12.1 174 21-236 23-200 (350)
296 KOG1202|consensus 97.9 4.4E-05 9.5E-10 75.4 8.1 198 25-256 1768-1976(2376)
297 cd01078 NAD_bind_H4MPT_DH NADP 97.7 0.00023 4.9E-09 58.4 9.3 82 21-122 24-107 (194)
298 PRK12320 hypothetical protein; 97.7 0.0002 4.3E-09 69.3 10.1 101 27-173 2-104 (699)
299 PF05368 NmrA: NmrA-like famil 97.7 0.0011 2.4E-08 55.8 13.4 147 30-241 2-151 (233)
300 TIGR00521 coaBC_dfp phosphopan 97.7 9.7E-05 2.1E-09 66.9 6.8 113 21-153 181-310 (390)
301 PRK06732 phosphopantothenate-- 97.6 0.00028 6.2E-09 59.4 7.4 95 27-145 17-116 (229)
302 KOG1431|consensus 97.5 0.0012 2.7E-08 54.3 9.6 149 26-223 2-156 (315)
303 PF01488 Shikimate_DH: Shikima 97.5 0.00061 1.3E-08 52.4 7.4 79 21-123 8-86 (135)
304 COG1090 Predicted nucleoside-d 97.4 0.0027 5.8E-08 54.0 10.9 161 30-237 2-164 (297)
305 KOG1203|consensus 97.3 0.0052 1.1E-07 55.5 12.0 130 22-177 76-207 (411)
306 KOG2733|consensus 97.3 0.0014 3E-08 57.4 8.0 82 28-123 8-94 (423)
307 COG1748 LYS9 Saccharopine dehy 97.2 0.0012 2.5E-08 59.4 7.3 78 26-123 2-79 (389)
308 PF03435 Saccharop_dh: Sacchar 97.2 0.00072 1.5E-08 61.6 5.9 75 31-123 3-78 (386)
309 KOG2865|consensus 97.2 0.0043 9.4E-08 52.9 9.9 122 22-175 58-181 (391)
310 COG2910 Putative NADH-flavin r 97.0 0.031 6.7E-07 44.7 12.6 155 27-237 2-158 (211)
311 KOG1372|consensus 97.0 0.003 6.5E-08 52.7 6.9 185 22-233 24-217 (376)
312 COG0702 Predicted nucleoside-d 96.9 0.032 7E-07 47.7 13.3 71 27-123 2-74 (275)
313 PRK14106 murD UDP-N-acetylmura 96.8 0.0047 1E-07 57.4 8.0 75 22-123 2-79 (450)
314 PRK14982 acyl-ACP reductase; P 96.6 0.0049 1.1E-07 54.7 6.3 76 21-124 151-227 (340)
315 TIGR02813 omega_3_PfaA polyket 96.6 0.021 4.6E-07 63.1 12.2 183 22-234 1752-1938(2582)
316 PRK12549 shikimate 5-dehydroge 96.4 0.013 2.7E-07 51.1 7.4 53 22-82 124-176 (284)
317 COG0169 AroE Shikimate 5-dehyd 96.3 0.012 2.6E-07 51.0 6.6 80 21-123 122-201 (283)
318 PRK15116 sulfur acceptor prote 96.2 0.069 1.5E-06 45.9 10.6 84 21-122 26-131 (268)
319 cd01065 NAD_bind_Shikimate_DH 96.2 0.019 4.1E-07 44.9 6.8 77 22-123 16-92 (155)
320 PRK00258 aroE shikimate 5-dehy 96.1 0.018 3.9E-07 50.0 7.0 50 21-78 119-168 (278)
321 PRK14027 quinate/shikimate deh 96.1 0.022 4.8E-07 49.5 7.4 82 22-123 124-205 (283)
322 cd00755 YgdL_like Family of ac 96.1 0.059 1.3E-06 45.4 9.7 85 22-121 8-111 (231)
323 PTZ00325 malate dehydrogenase; 96.1 0.031 6.7E-07 49.4 8.2 176 23-237 6-181 (321)
324 PLN00106 malate dehydrogenase 96.1 0.0073 1.6E-07 53.4 4.3 157 25-222 18-180 (323)
325 TIGR02356 adenyl_thiF thiazole 96.0 0.027 5.8E-07 46.5 7.2 82 21-121 17-120 (202)
326 PRK12475 thiamine/molybdopteri 96.0 0.027 5.8E-07 50.3 7.5 82 21-121 20-125 (338)
327 TIGR01809 Shik-DH-AROM shikima 96.0 0.023 4.9E-07 49.5 6.7 80 22-123 122-201 (282)
328 cd00757 ThiF_MoeB_HesA_family 95.9 0.033 7.2E-07 46.8 7.4 85 21-121 17-120 (228)
329 PF00899 ThiF: ThiF family; I 95.8 0.045 9.7E-07 41.9 7.1 81 25-121 2-101 (135)
330 cd08253 zeta_crystallin Zeta-c 95.7 0.18 3.8E-06 43.9 11.5 78 24-122 144-223 (325)
331 COG2130 Putative NADP-dependen 95.6 0.078 1.7E-06 45.9 8.3 105 24-178 150-257 (340)
332 cd08266 Zn_ADH_like1 Alcohol d 95.6 0.25 5.3E-06 43.5 12.1 78 24-122 166-245 (342)
333 TIGR00507 aroE shikimate 5-deh 95.5 0.079 1.7E-06 45.8 8.3 73 23-123 115-189 (270)
334 COG0604 Qor NADPH:quinone redu 95.5 0.14 3E-06 45.5 10.0 77 25-122 143-221 (326)
335 PRK08762 molybdopterin biosynt 95.4 0.052 1.1E-06 49.3 7.2 84 22-121 132-234 (376)
336 PRK09424 pntA NAD(P) transhydr 95.4 0.24 5.2E-06 46.6 11.7 111 22-172 162-287 (509)
337 PRK05086 malate dehydrogenase; 95.4 0.039 8.3E-07 48.7 5.9 116 27-172 2-119 (312)
338 PRK05690 molybdopterin biosynt 95.3 0.086 1.9E-06 44.9 7.8 85 21-121 28-131 (245)
339 TIGR02355 moeB molybdopterin s 95.3 0.07 1.5E-06 45.2 7.2 85 21-121 20-123 (240)
340 PRK12749 quinate/shikimate deh 95.1 0.12 2.5E-06 45.2 8.0 84 21-122 120-206 (288)
341 PRK13940 glutamyl-tRNA reducta 95.1 0.046 1E-06 50.2 5.7 78 21-124 177-254 (414)
342 PRK05597 molybdopterin biosynt 95.0 0.12 2.5E-06 46.6 8.1 84 21-120 24-126 (355)
343 cd01483 E1_enzyme_family Super 95.0 0.13 2.9E-06 39.7 7.3 75 28-121 2-98 (143)
344 cd08293 PTGR2 Prostaglandin re 94.9 0.26 5.7E-06 43.8 10.0 76 25-121 155-233 (345)
345 PRK07688 thiamine/molybdopteri 94.8 0.16 3.5E-06 45.4 8.4 82 21-121 20-125 (339)
346 cd01336 MDH_cytoplasmic_cytoso 94.7 0.055 1.2E-06 48.1 5.1 55 111-173 77-131 (325)
347 TIGR02354 thiF_fam2 thiamine b 94.7 0.17 3.7E-06 41.6 7.6 80 21-119 17-117 (200)
348 cd01489 Uba2_SUMO Ubiquitin ac 94.6 0.15 3.2E-06 44.9 7.5 78 28-120 2-98 (312)
349 TIGR00561 pntA NAD(P) transhyd 94.6 0.45 9.7E-06 44.8 11.0 115 21-173 160-287 (511)
350 PRK08223 hypothetical protein; 94.6 0.17 3.8E-06 43.8 7.7 81 21-120 23-125 (287)
351 cd05291 HicDH_like L-2-hydroxy 94.6 0.25 5.5E-06 43.5 9.0 115 27-175 2-122 (306)
352 cd01485 E1-1_like Ubiquitin ac 94.6 0.2 4.2E-06 41.2 7.7 82 21-120 15-121 (198)
353 PRK08644 thiamine biosynthesis 94.5 0.21 4.6E-06 41.4 8.0 84 21-120 24-125 (212)
354 cd08295 double_bond_reductase_ 94.5 0.28 6E-06 43.6 9.2 78 24-121 151-230 (338)
355 PRK02472 murD UDP-N-acetylmura 94.5 0.06 1.3E-06 50.0 5.1 76 22-123 2-79 (447)
356 cd01338 MDH_choloroplast_like 94.5 0.11 2.3E-06 46.2 6.3 154 26-222 3-170 (322)
357 PF00056 Ldh_1_N: lactate/mala 94.5 0.71 1.5E-05 35.6 10.3 115 27-172 2-120 (141)
358 cd01492 Aos1_SUMO Ubiquitin ac 94.4 0.14 3.1E-06 41.9 6.7 81 21-121 17-119 (197)
359 PRK05600 thiamine biosynthesis 94.4 0.18 4E-06 45.5 7.8 66 21-94 37-121 (370)
360 cd01484 E1-2_like Ubiquitin ac 94.4 0.24 5.3E-06 41.7 8.0 80 28-121 2-100 (234)
361 PRK08328 hypothetical protein; 94.4 0.24 5.2E-06 41.7 8.0 85 21-121 23-127 (231)
362 cd00704 MDH Malate dehydrogena 94.3 0.14 3.1E-06 45.4 6.8 58 108-173 72-129 (323)
363 TIGR01381 E1_like_apg7 E1-like 94.2 0.13 2.8E-06 49.3 6.5 93 21-121 334-457 (664)
364 cd01075 NAD_bind_Leu_Phe_Val_D 94.2 0.056 1.2E-06 44.5 3.6 46 20-76 23-70 (200)
365 PLN03154 putative allyl alcoho 94.1 0.39 8.4E-06 43.0 9.3 78 24-121 158-237 (348)
366 PRK14968 putative methyltransf 94.0 0.86 1.9E-05 36.5 10.5 120 24-171 23-149 (188)
367 PRK09620 hypothetical protein; 94.0 0.052 1.1E-06 45.7 3.3 38 23-64 1-48 (229)
368 cd05188 MDR Medium chain reduc 93.6 0.87 1.9E-05 38.4 10.3 76 24-122 134-211 (271)
369 cd01488 Uba3_RUB Ubiquitin act 93.6 0.38 8.2E-06 41.9 8.0 76 28-120 2-96 (291)
370 TIGR02825 B4_12hDH leukotriene 93.6 0.58 1.3E-05 41.2 9.5 78 24-122 138-217 (325)
371 PRK07411 hypothetical protein; 93.6 0.28 6.1E-06 44.7 7.5 84 21-120 34-136 (390)
372 cd01487 E1_ThiF_like E1_ThiF_l 93.5 0.44 9.6E-06 38.2 7.6 75 28-121 2-97 (174)
373 KOG2013|consensus 93.4 0.29 6.4E-06 44.9 7.1 71 23-104 10-102 (603)
374 PLN02520 bifunctional 3-dehydr 93.4 0.15 3.2E-06 48.5 5.6 46 21-77 375-422 (529)
375 COG3268 Uncharacterized conser 93.4 0.21 4.6E-06 43.8 5.9 73 27-123 8-82 (382)
376 KOG0023|consensus 93.4 0.71 1.5E-05 40.4 9.1 65 24-105 181-246 (360)
377 KOG0024|consensus 93.4 0.61 1.3E-05 40.9 8.6 84 24-122 169-252 (354)
378 cd01486 Apg7 Apg7 is an E1-lik 93.4 0.23 5E-06 43.3 6.1 58 28-93 2-80 (307)
379 PF04127 DFP: DNA / pantothena 93.4 0.3 6.5E-06 39.6 6.5 82 23-123 1-93 (185)
380 COG0373 HemA Glutamyl-tRNA red 93.3 0.27 5.8E-06 44.8 6.8 50 21-78 174-223 (414)
381 PRK14851 hypothetical protein; 93.3 0.35 7.5E-06 47.3 7.9 85 21-121 39-142 (679)
382 COG3007 Uncharacterized paraqu 93.3 0.89 1.9E-05 39.2 9.2 86 26-121 42-140 (398)
383 COG2263 Predicted RNA methylas 93.2 0.69 1.5E-05 37.4 8.1 79 20-123 41-119 (198)
384 PRK07878 molybdopterin biosynt 93.2 0.4 8.6E-06 43.8 7.7 66 22-95 39-123 (392)
385 PRK06849 hypothetical protein; 93.2 0.75 1.6E-05 41.9 9.6 81 24-121 3-85 (389)
386 COG1064 AdhP Zn-dependent alco 93.1 1.2 2.6E-05 39.7 10.3 95 24-173 166-262 (339)
387 KOG1198|consensus 93.1 0.31 6.8E-06 43.7 6.8 80 23-123 156-236 (347)
388 KOG4039|consensus 92.8 0.62 1.3E-05 37.3 7.2 154 23-237 16-170 (238)
389 PRK00066 ldh L-lactate dehydro 92.8 1.3 2.9E-05 39.1 10.3 117 24-175 5-127 (315)
390 TIGR01758 MDH_euk_cyt malate d 92.4 0.49 1.1E-05 42.0 6.9 112 28-173 2-128 (324)
391 cd01491 Ube1_repeat1 Ubiquitin 92.3 0.51 1.1E-05 41.0 6.9 62 21-93 15-98 (286)
392 cd05213 NAD_bind_Glutamyl_tRNA 92.0 0.55 1.2E-05 41.5 6.9 74 23-123 176-249 (311)
393 PLN00203 glutamyl-tRNA reducta 92.0 0.51 1.1E-05 44.6 7.0 48 22-77 263-310 (519)
394 PLN00112 malate dehydrogenase 92.0 1.1 2.4E-05 41.4 9.0 113 27-173 102-229 (444)
395 cd05276 p53_inducible_oxidored 92.0 1.1 2.3E-05 38.8 8.8 78 24-122 139-218 (323)
396 TIGR00518 alaDH alanine dehydr 91.8 0.52 1.1E-05 42.7 6.7 77 23-123 165-241 (370)
397 PRK00045 hemA glutamyl-tRNA re 91.8 0.65 1.4E-05 42.9 7.4 48 22-77 179-226 (423)
398 PRK14852 hypothetical protein; 91.8 0.57 1.2E-05 47.3 7.3 85 21-121 328-431 (989)
399 cd08259 Zn_ADH5 Alcohol dehydr 91.5 1.1 2.4E-05 39.3 8.3 73 24-122 162-236 (332)
400 cd05288 PGDH Prostaglandin deh 91.5 2.5 5.4E-05 37.0 10.6 78 24-122 145-224 (329)
401 PF12242 Eno-Rase_NADH_b: NAD( 91.4 0.26 5.6E-06 33.4 3.1 35 24-67 37-72 (78)
402 TIGR01757 Malate-DH_plant mala 91.3 1.6 3.5E-05 39.6 9.1 118 27-173 46-173 (387)
403 cd01490 Ube1_repeat2 Ubiquitin 91.1 1.5 3.2E-05 40.5 8.7 77 28-119 2-105 (435)
404 PRK09880 L-idonate 5-dehydroge 91.0 1.1 2.5E-05 39.8 8.0 77 24-122 169-245 (343)
405 PLN02602 lactate dehydrogenase 91.0 2.8 6.2E-05 37.6 10.4 119 26-175 38-159 (350)
406 PRK01438 murD UDP-N-acetylmura 91.0 3.5 7.7E-05 38.6 11.6 76 20-123 11-89 (480)
407 PF10727 Rossmann-like: Rossma 90.7 0.95 2.1E-05 34.3 6.0 83 27-123 12-107 (127)
408 COG1063 Tdh Threonine dehydrog 90.5 2.5 5.4E-05 38.0 9.6 77 25-121 169-247 (350)
409 TIGR01035 hemA glutamyl-tRNA r 90.3 0.87 1.9E-05 42.0 6.7 48 22-77 177-224 (417)
410 PLN02819 lysine-ketoglutarate 90.3 0.59 1.3E-05 47.7 6.0 78 24-122 568-658 (1042)
411 PRK04308 murD UDP-N-acetylmura 90.1 1.3 2.8E-05 41.2 7.7 76 23-123 3-78 (445)
412 TIGR00446 nop2p NOL1/NOP2/sun 89.3 13 0.00028 31.9 12.8 106 53-173 91-202 (264)
413 KOG1197|consensus 89.3 12 0.00026 32.0 11.8 157 25-234 147-307 (336)
414 cd05294 LDH-like_MDH_nadp A la 88.9 2.2 4.8E-05 37.6 7.9 116 27-173 2-124 (309)
415 TIGR01759 MalateDH-SF1 malate 88.8 2.5 5.3E-05 37.6 8.1 115 27-173 5-132 (323)
416 PRK14192 bifunctional 5,10-met 88.7 0.92 2E-05 39.4 5.3 33 21-64 155-188 (283)
417 PRK12550 shikimate 5-dehydroge 88.7 0.73 1.6E-05 39.8 4.6 45 25-77 122-166 (272)
418 PRK05442 malate dehydrogenase; 88.6 2.2 4.7E-05 37.9 7.7 119 26-173 5-133 (326)
419 PF03668 ATP_bind_2: P-loop AT 88.6 6.5 0.00014 34.1 10.2 149 28-187 3-184 (284)
420 COG4123 Predicted O-methyltran 88.5 2.7 5.8E-05 35.7 7.7 74 42-126 56-129 (248)
421 PRK13982 bifunctional SbtC-lik 88.1 1.7 3.6E-05 40.6 6.8 83 21-123 252-345 (475)
422 TIGR02824 quinone_pig3 putativ 87.9 2.8 6.2E-05 36.3 8.1 77 24-121 139-217 (325)
423 PRK07877 hypothetical protein; 87.7 2.6 5.7E-05 41.6 8.2 81 21-121 103-205 (722)
424 PRK09310 aroDE bifunctional 3- 87.6 1.1 2.5E-05 42.0 5.5 46 21-77 328-375 (477)
425 TIGR02818 adh_III_F_hyde S-(hy 87.5 3.4 7.3E-05 37.2 8.5 77 24-122 185-265 (368)
426 cd08294 leukotriene_B4_DH_like 87.3 3.1 6.7E-05 36.4 7.9 76 24-121 143-220 (329)
427 cd00300 LDH_like L-lactate deh 87.2 5 0.00011 35.2 9.1 113 31-175 3-120 (300)
428 KOG2015|consensus 87.0 1.4 3E-05 38.6 5.2 64 23-97 38-123 (422)
429 TIGR03201 dearomat_had 6-hydro 86.2 12 0.00026 33.3 11.2 39 24-73 166-206 (349)
430 PLN02740 Alcohol dehydrogenase 86.1 3.6 7.9E-05 37.2 7.9 80 24-122 198-278 (381)
431 cd08300 alcohol_DH_class_III c 85.9 4.2 9E-05 36.6 8.1 80 24-122 186-266 (368)
432 PRK14901 16S rRNA methyltransf 85.7 14 0.0003 34.3 11.6 125 25-173 253-387 (434)
433 TIGR00715 precor6x_red precorr 85.6 1.7 3.6E-05 37.2 5.1 71 27-121 2-74 (256)
434 PTZ00082 L-lactate dehydrogena 85.6 9 0.00019 34.0 9.8 126 24-175 5-133 (321)
435 PRK08306 dipicolinate synthase 85.6 3.7 7.9E-05 36.0 7.3 39 21-70 148-188 (296)
436 PRK10309 galactitol-1-phosphat 85.6 6.3 0.00014 35.0 9.0 38 24-72 160-200 (347)
437 COG1926 Predicted phosphoribos 85.5 6.6 0.00014 32.3 8.1 80 14-107 113-197 (220)
438 cd05290 LDH_3 A subgroup of L- 85.5 15 0.00033 32.3 11.1 116 31-174 4-123 (307)
439 PF02254 TrkA_N: TrkA-N domain 85.5 3.8 8.2E-05 29.9 6.4 67 31-121 3-71 (116)
440 TIGR01408 Ube1 ubiquitin-activ 85.3 3.9 8.5E-05 42.0 8.3 81 23-119 417-525 (1008)
441 TIGR02819 fdhA_non_GSH formald 85.2 8 0.00017 35.3 9.6 114 24-172 185-301 (393)
442 KOG1196|consensus 85.1 6.9 0.00015 34.1 8.4 103 24-175 153-258 (343)
443 PF00107 ADH_zinc_N: Zinc-bind 85.0 6.2 0.00013 29.3 7.6 90 43-173 1-92 (130)
444 cd08268 MDR2 Medium chain dehy 84.9 5 0.00011 34.7 8.0 39 24-72 144-184 (328)
445 KOG0069|consensus 84.7 4.6 9.9E-05 35.9 7.4 90 20-120 157-253 (336)
446 COG1023 Gnd Predicted 6-phosph 84.7 12 0.00027 31.6 9.4 75 42-118 6-92 (300)
447 cd08248 RTN4I1 Human Reticulon 84.5 4.2 9.2E-05 36.0 7.5 31 24-64 162-192 (350)
448 cd05295 MDH_like Malate dehydr 84.5 13 0.00028 34.6 10.5 113 27-171 125-250 (452)
449 cd08239 THR_DH_like L-threonin 84.5 3.5 7.6E-05 36.5 6.9 79 24-122 163-241 (339)
450 cd05293 LDH_1 A subgroup of L- 84.3 17 0.00036 32.1 10.9 118 27-175 5-125 (312)
451 cd01493 APPBP1_RUB Ubiquitin a 84.2 4 8.6E-05 37.7 7.1 62 22-94 17-100 (425)
452 cd08243 quinone_oxidoreductase 84.1 5.7 0.00012 34.4 8.0 39 24-72 142-182 (320)
453 cd08301 alcohol_DH_plants Plan 83.8 5.9 0.00013 35.6 8.1 79 24-121 187-266 (369)
454 COG0569 TrkA K+ transport syst 83.8 4.3 9.2E-05 34.0 6.7 72 27-121 2-75 (225)
455 TIGR02853 spore_dpaA dipicolin 83.7 2.3 4.9E-05 37.1 5.2 41 21-72 147-189 (287)
456 PRK14902 16S rRNA methyltransf 83.7 24 0.00053 32.8 12.3 78 25-121 251-329 (444)
457 PLN02827 Alcohol dehydrogenase 83.5 6 0.00013 35.8 8.1 77 24-122 193-273 (378)
458 TIGR02992 ectoine_eutC ectoine 83.3 2.1 4.5E-05 38.1 4.9 75 25-122 129-204 (326)
459 cd08299 alcohol_DH_class_I_II_ 83.2 6.5 0.00014 35.5 8.1 79 24-121 190-269 (373)
460 cd08238 sorbose_phosphate_red 83.1 6.1 0.00013 36.2 8.0 88 24-122 175-267 (410)
461 cd01337 MDH_glyoxysomal_mitoch 82.8 9.5 0.00021 33.7 8.7 114 27-173 2-120 (310)
462 TIGR03736 PRTRC_ThiF PRTRC sys 82.6 9.2 0.0002 32.5 8.2 77 25-121 11-115 (244)
463 cd08247 AST1_like AST1 is a cy 82.6 7.7 0.00017 34.5 8.3 82 24-122 151-235 (352)
464 PF12076 Wax2_C: WAX2 C-termin 82.5 2 4.3E-05 33.6 3.8 42 30-80 2-43 (164)
465 KOG0025|consensus 82.2 5.1 0.00011 34.8 6.4 83 25-122 161-243 (354)
466 cd08291 ETR_like_1 2-enoyl thi 82.2 4.9 0.00011 35.3 6.8 78 24-121 142-221 (324)
467 cd08244 MDR_enoyl_red Possible 82.1 5.8 0.00012 34.6 7.3 77 24-121 142-220 (324)
468 PF03808 Glyco_tran_WecB: Glyc 82.0 18 0.00039 28.8 9.4 63 57-122 46-111 (172)
469 COG0039 Mdh Malate/lactate deh 81.9 5.4 0.00012 35.2 6.7 119 27-175 2-123 (313)
470 PRK12480 D-lactate dehydrogena 81.6 16 0.00034 32.6 9.8 89 20-122 141-235 (330)
471 cd06533 Glyco_transf_WecG_TagA 81.6 17 0.00037 28.9 9.1 76 45-123 31-110 (171)
472 PF02826 2-Hacid_dh_C: D-isome 81.6 4.2 9.2E-05 32.6 5.7 43 15-68 26-70 (178)
473 cd08281 liver_ADH_like1 Zinc-d 81.6 5.7 0.00012 35.7 7.2 79 24-122 191-269 (371)
474 cd08292 ETR_like_2 2-enoyl thi 81.5 4.5 9.7E-05 35.3 6.3 39 24-72 139-179 (324)
475 PRK15128 23S rRNA m(5)C1962 me 81.4 43 0.00094 30.7 14.1 91 64-172 250-341 (396)
476 cd01080 NAD_bind_m-THF_DH_Cycl 81.1 3.5 7.5E-05 32.9 4.9 33 21-63 40-72 (168)
477 cd05286 QOR2 Quinone oxidoredu 81.1 9.7 0.00021 32.7 8.3 39 24-72 136-176 (320)
478 PF13241 NAD_binding_7: Putati 81.0 2 4.4E-05 31.0 3.3 33 21-64 3-35 (103)
479 TIGR01408 Ube1 ubiquitin-activ 80.8 4.8 0.0001 41.4 6.9 62 21-93 20-103 (1008)
480 cd08231 MDR_TM0436_like Hypoth 80.8 7.8 0.00017 34.6 7.7 37 24-71 177-216 (361)
481 PF01113 DapB_N: Dihydrodipico 80.8 6 0.00013 29.6 5.9 74 28-122 3-101 (124)
482 PRK06153 hypothetical protein; 80.8 9.4 0.0002 34.7 7.9 82 21-121 172-275 (393)
483 cd08250 Mgc45594_like Mgc45594 80.8 8.5 0.00018 33.7 7.8 76 24-121 139-216 (329)
484 KOG2336|consensus 80.5 13 0.00028 32.1 8.2 102 22-142 79-202 (422)
485 PLN02586 probable cinnamyl alc 80.5 6.1 0.00013 35.5 6.9 72 24-121 183-256 (360)
486 TIGR01470 cysG_Nterm siroheme 80.4 7.7 0.00017 32.0 6.9 35 21-66 5-39 (205)
487 PRK04148 hypothetical protein; 80.3 6.5 0.00014 30.0 5.9 54 25-98 17-72 (134)
488 cd08277 liver_alcohol_DH_like 80.2 8.6 0.00019 34.5 7.8 80 24-122 184-264 (365)
489 PRK06719 precorrin-2 dehydroge 80.1 2.5 5.3E-05 33.3 3.7 39 21-70 9-47 (157)
490 TIGR03451 mycoS_dep_FDH mycoth 80.1 5.7 0.00012 35.5 6.6 77 24-122 176-255 (358)
491 cd08241 QOR1 Quinone oxidoredu 80.1 7.4 0.00016 33.5 7.2 39 24-72 139-179 (323)
492 cd00650 LDH_MDH_like NAD-depen 79.9 6.9 0.00015 33.5 6.8 114 31-174 3-123 (263)
493 cd08283 FDH_like_1 Glutathione 79.9 21 0.00046 32.3 10.3 81 24-122 184-264 (386)
494 COG0111 SerA Phosphoglycerate 79.4 5.5 0.00012 35.4 6.0 88 18-121 135-234 (324)
495 COG1660 Predicted P-loop-conta 79.3 24 0.00051 30.3 9.3 85 28-121 3-92 (286)
496 PTZ00117 malate dehydrogenase; 79.3 23 0.00049 31.4 10.0 121 25-175 5-127 (319)
497 PLN02178 cinnamyl-alcohol dehy 79.2 7.1 0.00015 35.4 6.9 73 24-122 178-252 (375)
498 PTZ00354 alcohol dehydrogenase 79.1 13 0.00029 32.3 8.6 42 24-73 140-181 (334)
499 COG0299 PurN Folate-dependent 78.8 16 0.00035 29.7 7.9 31 212-242 120-151 (200)
500 COG0421 SpeE Spermidine syntha 78.8 12 0.00025 32.6 7.7 43 26-77 78-120 (282)
No 1
>KOG1208|consensus
Probab=100.00 E-value=7.3e-43 Score=303.48 Aligned_cols=245 Identities=31% Similarity=0.308 Sum_probs=214.6
Q ss_pred CCCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCCh
Q psy4251 19 PASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 19 ~~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
...++.|++++ |||++ +|||+++ +.+|+.+|.+|+ +||.+++++++++|.+..+..++.+++||++|.
T Consensus 29 ~~~~~~~~~~v-VTGan------sGIG~et---a~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl 98 (314)
T KOG1208|consen 29 HGIDLSGKVAL-VTGAT------SGIGFET---ARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSL 98 (314)
T ss_pred ccccCCCcEEE-EECCC------CchHHHH---HHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCH
Confidence 35778999999 99999 9999999 666778887776 599999999999999877788999999999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++|++|++++++.++++|++|||||++.++...+.|++|.+|+||++|+|+|++.|+|.|+++++ +|||+|||..+
T Consensus 99 ~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~--~RIV~vsS~~~-- 174 (314)
T KOG1208|consen 99 KSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP--SRIVNVSSILG-- 174 (314)
T ss_pred HHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCC--CCEEEEcCccc--
Confidence 99999999999999999999999999988888899999999999999999999999999999988 99999999988
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-c-ccccccccCCccchhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-T-VSKKWWRFGTPVRTFS 254 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~-~~~~~~~~~~~~~~~~ 254 (292)
..++++++++++..+.|+...+|+.||.++..+++.|++++.. ||.++++|||.|+ + +.+.. .+...+..
T Consensus 175 ----~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~---~~~~~l~~ 246 (314)
T KOG1208|consen 175 ----GGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVN---LLLRLLAK 246 (314)
T ss_pred ----cCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecch---HHHHHHHH
Confidence 2335777887744445778889999999999999999999988 9999999999999 6 77622 23334555
Q ss_pred hhhccccccCCHHHhhc-------ccccCCCCCccccCCc
Q psy4251 255 WISRVRPVTNFQVDLTG-------TAEKVGLSGLPDSEWM 287 (292)
Q Consensus 255 ~~~~~~~~~~~~~~~a~-------~~~~~~~~G~~~~~~~ 287 (292)
.+ ..++.++++++|+ .|+.+..+|.||.||.
T Consensus 247 ~l--~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~ 284 (314)
T KOG1208|consen 247 KL--SWPLTKSPEQGAATTCYAALSPELEGVSGKYFEDCA 284 (314)
T ss_pred HH--HHHhccCHHHHhhheehhccCccccCcccccccccc
Confidence 55 5567799999998 7888999999998864
No 2
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=100.00 E-value=5e-37 Score=258.03 Aligned_cols=211 Identities=16% Similarity=0.117 Sum_probs=185.1
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
...+++++ ||||| +|||+++ +.+|+++|++|+ +|+.++++++.+++++.+ +.++.++++|+++++++
T Consensus 3 ~~~~~~~l-ITGAS------sGIG~~~---A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~ 71 (265)
T COG0300 3 PMKGKTAL-ITGAS------SGIGAEL---AKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEAL 71 (265)
T ss_pred CCCCcEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHH
Confidence 45788999 99999 9999999 666888888776 599999999999999887 68999999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++.+++.+....||+||||||+. +++.+.+.++.++++++|+.+...|+++++|.|.++.. |+||+|+|.++..+
T Consensus 72 ~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~--G~IiNI~S~ag~~p 149 (265)
T COG0300 72 ERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA--GHIINIGSAAGLIP 149 (265)
T ss_pred HHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ceEEEEechhhcCC
Confidence 999999999988999999999986 46788999999999999999999999999999999888 99999999999987
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhh
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWI 256 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~ 256 (292)
. + .+..|++||+++..|+++|+.|+.++||+|.+|+||.|. ++++..... . ... .
T Consensus 150 ~------------p-------~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~--~-~~~--~ 205 (265)
T COG0300 150 T------------P-------YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSD--V-YLL--S 205 (265)
T ss_pred C------------c-------chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccc--c-ccc--c
Confidence 6 3 788999999999999999999999999999999999999 998622111 0 000 0
Q ss_pred hccccccCCHHHhhc
Q psy4251 257 SRVRPVTNFQVDLTG 271 (292)
Q Consensus 257 ~~~~~~~~~~~~~a~ 271 (292)
....+.+|++.|+
T Consensus 206 --~~~~~~~~~~va~ 218 (265)
T COG0300 206 --PGELVLSPEDVAE 218 (265)
T ss_pred --chhhccCHHHHHH
Confidence 1224678888887
No 3
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=100.00 E-value=8.7e-37 Score=249.61 Aligned_cols=213 Identities=17% Similarity=0.139 Sum_probs=180.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.+++|+++ ||||| +|||.++ +.+|++.|+.|+ +|+.++++++++++.+ +++..+..|++|.+++
T Consensus 3 ~~~~kv~l-ITGAS------SGiG~A~---A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~ 68 (246)
T COG4221 3 TLKGKVAL-ITGAS------SGIGEAT---ARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAV 68 (246)
T ss_pred CCCCcEEE-EecCc------chHHHHH---HHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHH
Confidence 45678888 99999 9999999 666778888877 4999999999998864 5789999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++.+.+++++||+||||||.+ .+..+.+.++|+.++++|+.|.++.+++++|.|.+++. |+||++||.++..+
T Consensus 69 ~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~--G~IiN~~SiAG~~~ 146 (246)
T COG4221 69 EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKS--GHIINLGSIAGRYP 146 (246)
T ss_pred HHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCC--ceEEEecccccccc
Confidence 999999999999999999999997 36678899999999999999999999999999999988 99999999998877
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhh
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWI 256 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~ 256 (292)
. + +...|+++|+++..|++.|.+++..++|||.+|+||.|. ++.......+-..+.-...
T Consensus 147 y------------~-------~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y 207 (246)
T COG4221 147 Y------------P-------GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY 207 (246)
T ss_pred C------------C-------CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh
Confidence 6 3 788999999999999999999999999999999999997 6555543222111211111
Q ss_pred hccccccCCHHHhhc
Q psy4251 257 SRVRPVTNFQVDLTG 271 (292)
Q Consensus 257 ~~~~~~~~~~~~~a~ 271 (292)
......+|++.|+
T Consensus 208 --~~~~~l~p~dIA~ 220 (246)
T COG4221 208 --KGGTALTPEDIAE 220 (246)
T ss_pred --ccCCCCCHHHHHH
Confidence 2223568888876
No 4
>PRK05854 short chain dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-36 Score=266.72 Aligned_cols=246 Identities=26% Similarity=0.240 Sum_probs=193.1
Q ss_pred CCCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCCh
Q psy4251 19 PASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 19 ~~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
...+++||+++ ||||+ +|||+++ +.+|+.+|+.|+ +|+.++++++.+++.+..++.++.+++||++|.
T Consensus 8 ~~~~l~gk~~l-ITGas------~GIG~~~---a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~ 77 (313)
T PRK05854 8 TVPDLSGKRAV-VTGAS------DGLGLGL---ARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSL 77 (313)
T ss_pred cCcccCCCEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCH
Confidence 35678999999 99999 9999999 556667787776 499999999999998776667899999999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccCC-CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFGL-GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
++++++++++.+++++||+||||||++.+ ..+.+.++++.++++|++|++++++.++|.|.++ . +|||++||.++.
T Consensus 78 ~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~--~riv~vsS~~~~ 154 (313)
T PRK05854 78 ASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-R--ARVTSQSSIAAR 154 (313)
T ss_pred HHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-C--CCeEEEechhhc
Confidence 99999999999999999999999998753 3457889999999999999999999999999765 4 899999999876
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc--CCCeEEEEecCCccc-cccccccccC-----
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY--KYKIALSSRHCCWKI-TVSKKWWRFG----- 247 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~gi~v~~v~PG~v~-~~~~~~~~~~----- 247 (292)
.+. +++++++. ...+.+...|+.||+++.+|++++++++. ..||+||+++||+|. ++.+......
T Consensus 155 ~~~-----~~~~~~~~--~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~ 227 (313)
T PRK05854 155 RGA-----INWDDLNW--ERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDT 227 (313)
T ss_pred CCC-----cCcccccc--cccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhH
Confidence 543 23444433 33455788999999999999999998753 568999999999999 8875432100
Q ss_pred CccchhhhhhccccccCCHHHhhc-------ccccCCCCCccccCC
Q psy4251 248 TPVRTFSWISRVRPVTNFQVDLTG-------TAEKVGLSGLPDSEW 286 (292)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~a~-------~~~~~~~~G~~~~~~ 286 (292)
+...++.++.....+.++++++|. ++.. .+|.||.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~--~~g~~~~~~ 271 (313)
T PRK05854 228 LMVRLIRSLSARGFLVGTVESAILPALYAATSPDA--EGGAFYGPR 271 (313)
T ss_pred HHHHHHHHHhhcccccCCHHHHHHHhhheeeCCCC--CCCcEECCC
Confidence 011222222111234678999887 2333 369999875
No 5
>KOG1205|consensus
Probab=100.00 E-value=3.3e-37 Score=260.97 Aligned_cols=192 Identities=18% Similarity=0.182 Sum_probs=171.3
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcE--EEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKL--FYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~--v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
...++||+|+ ||||| +|||.++ +.+++.+|+. +++|..++++.+.+++++..+..++..++||++|.+
T Consensus 7 ~e~~~~kvVv-ITGAS------sGIG~~l---A~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~ 76 (282)
T KOG1205|consen 7 MERLAGKVVL-ITGAS------SGIGEAL---AYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEE 76 (282)
T ss_pred HHHhCCCEEE-EeCCC------cHHHHHH---HHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHH
Confidence 4678999999 99999 9999999 6777788875 446899999999999998886557999999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
++.++++++.+++|++|+||||||+.. ...+.+.+++...|++|++|++.++++++|+|++++. |+||+++|.++.
T Consensus 77 ~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~--GhIVvisSiaG~ 154 (282)
T KOG1205|consen 77 SVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRND--GHIVVISSIAGK 154 (282)
T ss_pred HHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCC--CeEEEEeccccc
Confidence 999999999999999999999999974 3456677889999999999999999999999999887 999999999999
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCC--eEEEEecCCccc-cccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYK--IALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~PG~v~-~~~~~~ 243 (292)
.+. | ....|++||+|+.+|+++|..|+.+.+ |++ +|+||+|+ ++....
T Consensus 155 ~~~------------P-------~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~ 205 (282)
T KOG1205|consen 155 MPL------------P-------FRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE 205 (282)
T ss_pred cCC------------C-------cccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence 876 3 556999999999999999999999876 666 99999999 866553
No 6
>KOG1201|consensus
Probab=100.00 E-value=4.1e-36 Score=251.96 Aligned_cols=202 Identities=18% Similarity=0.263 Sum_probs=179.5
Q ss_pred HHHHhhcccCCCCCCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCC
Q psy4251 7 YLKQHLLNKLLHPASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSA 84 (292)
Q Consensus 7 ~~~~~~~~~~~~~~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~ 84 (292)
++.+-...-++.+.++.+|++|+ ||||+ +|||+++ +++++++|..++ ..+.+..++..+++++. +
T Consensus 20 ~~~s~~~~~l~~~~k~v~g~~vL-ITGgg------~GlGr~i---alefa~rg~~~vl~Din~~~~~etv~~~~~~---g 86 (300)
T KOG1201|consen 20 LLESLIKLLLPKPLKSVSGEIVL-ITGGG------SGLGRLI---ALEFAKRGAKLVLWDINKQGNEETVKEIRKI---G 86 (300)
T ss_pred HHHHHHHHhcccchhhccCCEEE-EeCCC------chHHHHH---HHHHHHhCCeEEEEeccccchHHHHHHHHhc---C
Confidence 34444444445578999999999 99999 9999999 777888888665 37788899999999876 3
Q ss_pred ceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCC
Q psy4251 85 QCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKL 162 (292)
Q Consensus 85 ~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~ 162 (292)
++..+.||+|+.+++.+.+++++++.|++|+||||||+.. +..+.+.+.+++++++|+.|++..+++|+|.|.+.+.
T Consensus 87 ~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~- 165 (300)
T KOG1201|consen 87 EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNN- 165 (300)
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCC-
Confidence 8999999999999999999999999999999999999984 6788899999999999999999999999999998888
Q ss_pred CcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC---CCeEEEEecCCccc-c
Q psy4251 163 FARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK---YKIALSSRHCCWKI-T 238 (292)
Q Consensus 163 ~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~---~gi~v~~v~PG~v~-~ 238 (292)
|+||.|+|.++..+. + +...|++||+|+.+|.++|..|+.. .||+...|+|++++ +
T Consensus 166 -GHIV~IaS~aG~~g~------------~-------gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg 225 (300)
T KOG1201|consen 166 -GHIVTIASVAGLFGP------------A-------GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG 225 (300)
T ss_pred -ceEEEehhhhcccCC------------c-------cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc
Confidence 999999999999887 3 7889999999999999999999853 47999999999999 8
Q ss_pred cccc
Q psy4251 239 VSKK 242 (292)
Q Consensus 239 ~~~~ 242 (292)
|...
T Consensus 226 mf~~ 229 (300)
T KOG1201|consen 226 MFDG 229 (300)
T ss_pred ccCC
Confidence 8876
No 7
>KOG1200|consensus
Probab=100.00 E-value=5.7e-35 Score=228.58 Aligned_cols=223 Identities=15% Similarity=0.122 Sum_probs=183.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.+..|.++ |||++ +|||+++ +..|+..|+.|++ ++...+++++..|.. .+....++||+++.+++
T Consensus 11 r~~sk~~~-vtGg~------sGIGrAi---a~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v 77 (256)
T KOG1200|consen 11 RLMSKVAA-VTGGS------SGIGRAI---AQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDV 77 (256)
T ss_pred HHhcceeE-EecCC------chHHHHH---HHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHH
Confidence 35567888 99999 9999999 8889999999886 566667776666642 14777889999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHh--cCCCCcEEEEEcCcccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIK--GAKLFARVVVVSSESHR 175 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~--~~~~~~~iV~vsS~~~~ 175 (292)
+..+++..+.++++++||||||+.. -...+..++|+..+.+|+.|.|++++++...|.. +++ .+||+|||+.+.
T Consensus 78 ~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~--~sIiNvsSIVGk 155 (256)
T KOG1200|consen 78 QNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQG--LSIINVSSIVGK 155 (256)
T ss_pred HHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCC--ceEEeehhhhcc
Confidence 9999999999999999999999974 3456688999999999999999999999998543 334 699999999999
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
+++. +...|+++|.++..|+++.|+|++.+|||||.|.||++. +|...+++ ....
T Consensus 156 iGN~-------------------GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~-----~v~~ 211 (256)
T KOG1200|consen 156 IGNF-------------------GQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPP-----KVLD 211 (256)
T ss_pred cccc-------------------cchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCH-----HHHH
Confidence 8873 889999999999999999999999999999999999999 99999876 3444
Q ss_pred hhhcccc--ccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISRVRP--VTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~~~~--~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.+-++-| .+..+||.|. ++.....+|.-+
T Consensus 212 ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~ 248 (256)
T KOG1200|consen 212 KILGMIPMGRLGEAEEVANLVLFLASDASSYITGTTL 248 (256)
T ss_pred HHHccCCccccCCHHHHHHHHHHHhccccccccceeE
Confidence 4322222 3678888886 555555666543
No 8
>PRK08339 short chain dehydrogenase; Provisional
Probab=100.00 E-value=6.4e-34 Score=245.18 Aligned_cols=230 Identities=13% Similarity=0.047 Sum_probs=181.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +.+|+++|+.|+ .|+.+++++..+++.+.. +.++.++++|++|+++
T Consensus 4 ~~l~~k~~l-ItGas------~gIG~ai---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~ 72 (263)
T PRK08339 4 IDLSGKLAF-TTASS------KGIGFGV---ARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKRED 72 (263)
T ss_pred cCCCCCEEE-EeCCC------CcHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHH
Confidence 458899999 99999 9999999 666777787766 488888888888886543 3578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++++++++. +++++|++|||||... +..+.+.++|++++++|+.+++.++++++|.|++++. |+||++||..+..
T Consensus 73 i~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~--g~Ii~isS~~~~~ 149 (263)
T PRK08339 73 LERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGF--GRIIYSTSVAIKE 149 (263)
T ss_pred HHHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--CEEEEEcCccccC
Confidence 999999986 5899999999999763 4567789999999999999999999999999987777 9999999987665
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccccccc-----CC-c
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRF-----GT-P 249 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~-----~~-~ 249 (292)
+. + ....|+++|+++..|++++++|+.++||+||+|+||+|+ ++....... +. +
T Consensus 150 ~~------------~-------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 210 (263)
T PRK08339 150 PI------------P-------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSV 210 (263)
T ss_pred CC------------C-------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCH
Confidence 43 2 567899999999999999999999999999999999999 876432110 00 0
Q ss_pred cchhhhhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 250 VRTFSWISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 250 ~~~~~~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
......+.. ....+.+|++.|. ++.....+|+.+
T Consensus 211 ~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~ 252 (263)
T PRK08339 211 EEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMI 252 (263)
T ss_pred HHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceE
Confidence 011111111 1123467888876 445556777754
No 9
>PRK08303 short chain dehydrogenase; Provisional
Probab=100.00 E-value=7.6e-34 Score=249.35 Aligned_cols=238 Identities=13% Similarity=0.093 Sum_probs=179.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC----------HHHHHHHHHHHHhhCCCCceEE
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC----------WDKANDAISKILTEKPSAQCIA 88 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~----------~~~~~~~~~~l~~~~~~~~~~~ 88 (292)
.+++||+++ ||||+ +|||+++ +.+|+..|+.|+. |+ .++++++.+++... +.++.+
T Consensus 4 ~~l~~k~~l-ITGgs------~GIG~ai---a~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~ 71 (305)
T PRK08303 4 KPLRGKVAL-VAGAT------RGAGRGI---AVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIA 71 (305)
T ss_pred cCCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEE
Confidence 457899999 99999 9999999 5556678877664 66 24566666667544 457888
Q ss_pred EEccCCChHHHHHHHHHHHHhCCCccEEEEcc-ccc------CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC
Q psy4251 89 MELDLCRLKSVKKFAEEYQKKFRSLNILVLNA-GVF------GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK 161 (292)
Q Consensus 89 ~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nA-g~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~ 161 (292)
++||++|+++++++++++.+++++||+||||| |.. .+..+.+.++|++.+++|+.++++++++++|.|.+++.
T Consensus 72 ~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~ 151 (305)
T PRK08303 72 VQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPG 151 (305)
T ss_pred EEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCC
Confidence 99999999999999999999999999999999 752 34456678889999999999999999999999987766
Q ss_pred CCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 162 LFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 162 ~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
|+||++||..+..... .+.....|++||+++.+|+++++.|+.+.||+||+|+||+|+ ++.
T Consensus 152 --g~IV~isS~~~~~~~~----------------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~ 213 (305)
T PRK08303 152 --GLVVEITDGTAEYNAT----------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMM 213 (305)
T ss_pred --cEEEEECCccccccCc----------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHH
Confidence 9999999976543210 111356799999999999999999999999999999999999 875
Q ss_pred ccccccCCccchhhhhhcc--ccccCCHHHhhc------ccc-cCCCCCccccCCccc
Q psy4251 241 KKWWRFGTPVRTFSWISRV--RPVTNFQVDLTG------TAE-KVGLSGLPDSEWMWH 289 (292)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~------~~~-~~~~~G~~~~~~~w~ 289 (292)
...... ....+....... .....+|++.|. ++. ....+|+++.++.|+
T Consensus 214 ~~~~~~-~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~~~~~~ 270 (305)
T PRK08303 214 LDAFGV-TEENWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLSSGQLA 270 (305)
T ss_pred HHhhcc-CccchhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEEhHHHH
Confidence 432100 000110111011 123457999887 333 345799998776654
No 10
>PRK06197 short chain dehydrogenase; Provisional
Probab=100.00 E-value=3.5e-33 Score=245.76 Aligned_cols=245 Identities=26% Similarity=0.254 Sum_probs=188.1
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
..+++||+++ ||||+ +|||+++ +.+|+++|+.|+ +|+.++++++.+++.+..++.++.++++|++|.+
T Consensus 11 ~~~~~~k~vl-ItGas------~gIG~~~---a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~ 80 (306)
T PRK06197 11 IPDQSGRVAV-VTGAN------TGLGYET---AAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLA 80 (306)
T ss_pred cccCCCCEEE-EcCCC------CcHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHH
Confidence 3678999999 99999 9999999 555667776654 5888888888888876655568899999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
+++++++++.++++++|+||||||...+....+.++++.++++|++|++.+++.++|.|.+.+. ++||++||.++...
T Consensus 81 ~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~--~~iV~vSS~~~~~~ 158 (306)
T PRK06197 81 SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPG--SRVVTVSSGGHRIR 158 (306)
T ss_pred HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCC--CEEEEECCHHHhcc
Confidence 9999999999999999999999998765566788999999999999999999999999987766 89999999876542
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEE--ecCCccc-cccccccccCCccchhh
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSS--RHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~--v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
.. ..+++... +..+.+...|+.||+++++|++++++++.+.|++|++ ++||+|+ ++.++.+.. ...+..
T Consensus 159 ~~----~~~~~~~~--~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~~~~ 230 (306)
T PRK06197 159 AA----IHFDDLQW--ERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRPVAT 230 (306)
T ss_pred CC----CCccccCc--ccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHHHHH
Confidence 11 12222222 2234467899999999999999999999877866654 5799999 988765321 112222
Q ss_pred hhhccccccCCHHHhhc-----ccccCCCCCccccCC
Q psy4251 255 WISRVRPVTNFQVDLTG-----TAEKVGLSGLPDSEW 286 (292)
Q Consensus 255 ~~~~~~~~~~~~~~~a~-----~~~~~~~~G~~~~~~ 286 (292)
.+ .+.+.+++++++. .......+|.||.++
T Consensus 231 ~~--~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~ 265 (306)
T PRK06197 231 VL--APLLAQSPEMGALPTLRAATDPAVRGGQYYGPD 265 (306)
T ss_pred HH--HhhhcCCHHHHHHHHHHHhcCCCcCCCeEEccC
Confidence 22 2224678888876 222223478888643
No 11
>PRK07063 short chain dehydrogenase; Provisional
Probab=100.00 E-value=5.3e-33 Score=238.97 Aligned_cols=240 Identities=14% Similarity=0.120 Sum_probs=187.8
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||+++ +..|+++|+.|+ .|+.+++++..+++.+...+.++.++++|++|++++
T Consensus 4 ~l~~k~vl-VtGas------~gIG~~~---a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 73 (260)
T PRK07063 4 RLAGKVAL-VTGAA------QGIGAAI---ARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASV 73 (260)
T ss_pred ccCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHH
Confidence 47899999 99999 9999999 555667787776 488888888888887643356889999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
+++++++.++++++|+||||||... +..+.+.++|+.++++|+.+++.++++++|.|.+++. ++||++||..+..+
T Consensus 74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~ 151 (260)
T PRK07063 74 AAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGR--GSIVNIASTHAFKI 151 (260)
T ss_pred HHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCC--eEEEEECChhhccC
Confidence 9999999999999999999999753 4456778899999999999999999999999987766 89999999876654
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC-ccchhhh
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT-PVRTFSW 255 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~-~~~~~~~ 255 (292)
. + +...|++||+++..+++++++++.++||+||+|+||+|+ ++.+....... +......
T Consensus 152 ~------------~-------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 212 (260)
T PRK07063 152 I------------P-------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAE 212 (260)
T ss_pred C------------C-------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHH
Confidence 3 2 567899999999999999999999999999999999999 88654321100 0011111
Q ss_pred hhc--cccccCCHHHhhc------ccccCCCCCccc-cCCccccCC
Q psy4251 256 ISR--VRPVTNFQVDLTG------TAEKVGLSGLPD-SEWMWHYQY 292 (292)
Q Consensus 256 ~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~-~~~~w~~~~ 292 (292)
... ......+|++.|. ++.....+|+.+ .|.-|+..|
T Consensus 213 ~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~~~~ 258 (260)
T PRK07063 213 TLALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGRSVLY 258 (260)
T ss_pred HHhcCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCeeeec
Confidence 101 1223568888887 444556777754 355455443
No 12
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-33 Score=239.50 Aligned_cols=228 Identities=16% Similarity=0.180 Sum_probs=176.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.+++||+++ ||||+ +|||+++ +.+|++.|+.|+.-+....++..+++.+. +.++.++++|+++.++++
T Consensus 4 ~~l~~k~~l-ItGas------~gIG~ai---a~~l~~~G~~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~ 71 (251)
T PRK12481 4 FDLNGKVAI-ITGCN------TGLGQGM---AIGLAKAGADIVGVGVAEAPETQAQVEAL--GRKFHFITADLIQQKDID 71 (251)
T ss_pred cccCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEecCchHHHHHHHHHHc--CCeEEEEEeCCCCHHHHH
Confidence 357899999 99999 9999999 66677888888752222233444455443 457899999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYS 177 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~ 177 (292)
++++++.+.++++|+||||||+.. +..+.+.++|++++++|+.+++.++++++|.|.+++ . ++||++||..+..+
T Consensus 72 ~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~--g~ii~isS~~~~~~ 149 (251)
T PRK12481 72 SIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNG--GKIINIASMLSFQG 149 (251)
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCC--CEEEEeCChhhcCC
Confidence 999999999999999999999863 355678899999999999999999999999997653 5 89999999987765
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC-ccchhhh
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT-PVRTFSW 255 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~-~~~~~~~ 255 (292)
. + ....|++||+++..|+++++.++.++||+||+|+||+|+ ++.+....... .......
T Consensus 150 ~------------~-------~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 210 (251)
T PRK12481 150 G------------I-------RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER 210 (251)
T ss_pred C------------C-------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc
Confidence 4 2 456899999999999999999999999999999999999 88765321100 0111111
Q ss_pred hhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 256 ISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 256 ~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
+ ......+|++.|. ++.....+|+.+
T Consensus 211 ~--p~~~~~~peeva~~~~~L~s~~~~~~~G~~i 242 (251)
T PRK12481 211 I--PASRWGTPDDLAGPAIFLSSSASDYVTGYTL 242 (251)
T ss_pred C--CCCCCcCHHHHHHHHHHHhCccccCcCCceE
Confidence 1 1223468888887 444556677654
No 13
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=2.3e-33 Score=240.20 Aligned_cols=221 Identities=10% Similarity=0.012 Sum_probs=172.2
Q ss_pred CCCCceEEEEcCCCCCCCCcc--cchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYT--GLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~--GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
.++||+++ ||||+ + |||+++ +.+|++.|+.|+. |+ ++.++..+++. +.++.+++||++|.+
T Consensus 4 ~l~~k~~l-ItGas------~~~gIG~a~---a~~la~~G~~Vi~~~r~-~~~~~~~~~~~----~~~~~~~~~Dl~~~~ 68 (252)
T PRK06079 4 ILSGKKIV-VMGVA------NKRSIAWGC---AQAIKDQGATVIYTYQN-DRMKKSLQKLV----DEEDLLVECDVASDE 68 (252)
T ss_pred ccCCCEEE-EeCCC------CCCchHHHH---HHHHHHCCCEEEEecCc-hHHHHHHHhhc----cCceeEEeCCCCCHH
Confidence 47899999 99996 5 999999 6667788888774 66 34444444443 236888999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcC
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSS 171 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS 171 (292)
+++++++++.++++++|+||||||+.. +..+.+.++|+..+++|+.+++.+++.++|+|.+ . ++||+++|
T Consensus 69 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~--g~Iv~iss 144 (252)
T PRK06079 69 SIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--G--ASIVTLTY 144 (252)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--C--ceEEEEec
Confidence 999999999999999999999999863 4456788999999999999999999999999964 4 89999999
Q ss_pred cccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCcc
Q psy4251 172 ESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPV 250 (292)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~ 250 (292)
.++..+. + ....|++||+++.+|+++++.|+.++||+||+|+||+|+ ++.+..... .
T Consensus 145 ~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~---~ 202 (252)
T PRK06079 145 FGSERAI------------P-------NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH---K 202 (252)
T ss_pred cCccccC------------C-------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh---H
Confidence 8766543 2 567899999999999999999999999999999999999 876443110 0
Q ss_pred chhhhhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 251 RTFSWISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 251 ~~~~~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.......+ ......+|++.|. ++.....+|+.+
T Consensus 203 ~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i 243 (252)
T PRK06079 203 DLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDII 243 (252)
T ss_pred HHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEE
Confidence 11111101 1123568888887 455566677754
No 14
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=3.5e-33 Score=241.54 Aligned_cols=223 Identities=12% Similarity=0.042 Sum_probs=170.2
Q ss_pred CCCCceEEEEcCCCCCCCCcc--cchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYT--GLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~--GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
.++||+++ ||||+ + |||+++ +.+|++.|+.|+. |+.+..++ .+++.+.. + ...++++|++|.+
T Consensus 4 ~l~~k~~l-VTGas------~~~GIG~ai---A~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g-~~~~~~~Dv~d~~ 70 (271)
T PRK06505 4 LMQGKRGL-IMGVA------NDHSIAWGI---AKQLAAQGAELAFTYQGEALGKR-VKPLAESL-G-SDFVLPCDVEDIA 70 (271)
T ss_pred ccCCCEEE-EeCCC------CCCcHHHHH---HHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-C-CceEEeCCCCCHH
Confidence 36789999 99998 8 999999 6667788888764 65433333 34443332 2 2357899999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcC
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSS 171 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS 171 (292)
+++++++++.+++++||+||||||+.. ++.+.+.++|++.+++|+.+++.++++++|+|.+ . |+||++||
T Consensus 71 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~--G~Iv~isS 146 (271)
T PRK06505 71 SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--G--GSMLTLTY 146 (271)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--C--ceEEEEcC
Confidence 999999999999999999999999863 3456788999999999999999999999999973 4 89999999
Q ss_pred cccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCcc
Q psy4251 172 ESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPV 250 (292)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~ 250 (292)
.++..+. + ....|++||+++..|+++++.|+.++||+||+|+||+|+ ++.+..... .
T Consensus 147 ~~~~~~~------------~-------~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~---~ 204 (271)
T PRK06505 147 GGSTRVM------------P-------NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA---R 204 (271)
T ss_pred CCccccC------------C-------ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch---H
Confidence 8765543 2 567899999999999999999999999999999999999 875432110 0
Q ss_pred chhhhhhccc--cccCCHHHhhc------ccccCCCCCccc
Q psy4251 251 RTFSWISRVR--PVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 251 ~~~~~~~~~~--~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
....+..+.. ....+|+|.|. ++.....+|+.+
T Consensus 205 ~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i 245 (271)
T PRK06505 205 AIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIH 245 (271)
T ss_pred HHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCceEE
Confidence 1111111111 22458888887 444556677754
No 15
>PRK06196 oxidoreductase; Provisional
Probab=100.00 E-value=2.4e-32 Score=241.42 Aligned_cols=241 Identities=29% Similarity=0.299 Sum_probs=184.6
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +.+|+.+|+.|+ .|+.+++++..+++. .+.++++|++|.++
T Consensus 22 ~~l~~k~vl-ITGas------ggIG~~~---a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~ 85 (315)
T PRK06196 22 HDLSGKTAI-VTGGY------SGLGLET---TRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLES 85 (315)
T ss_pred CCCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHH
Confidence 467899999 99999 9999999 555667777766 488888877776653 37789999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
++++++++.++++++|+||||||+..+..+.+.++|+..+++|+.++++++++++|.|.+++. ++||++||..+..+.
T Consensus 86 v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~--~~iV~vSS~~~~~~~ 163 (315)
T PRK06196 86 VRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAG--ARVVALSSAGHRRSP 163 (315)
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CeEEEECCHHhccCC
Confidence 999999999989999999999998765566678899999999999999999999999988766 899999998655432
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCc-cchhhhh
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTP-VRTFSWI 256 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~-~~~~~~~ 256 (292)
. .+++... ...+.+...|+.||+++..+++.+++++...||++++|+||+|. ++.+........ ..+....
T Consensus 164 ~-----~~~~~~~--~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~ 236 (315)
T PRK06196 164 I-----RWDDPHF--TRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEH 236 (315)
T ss_pred C-----CccccCc--cCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhh
Confidence 1 2222211 22344678999999999999999999999889999999999999 887654321000 0011100
Q ss_pred h-ccccccCCHHHhhc-------ccccCCCCCccccCC
Q psy4251 257 S-RVRPVTNFQVDLTG-------TAEKVGLSGLPDSEW 286 (292)
Q Consensus 257 ~-~~~~~~~~~~~~a~-------~~~~~~~~G~~~~~~ 286 (292)
. .+.+...+|+++|. .+.....+|.|+.+|
T Consensus 237 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~ 274 (315)
T PRK06196 237 GNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDC 274 (315)
T ss_pred hhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCCC
Confidence 0 01123578999987 345556678888775
No 16
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=100.00 E-value=5.1e-33 Score=242.51 Aligned_cols=228 Identities=13% Similarity=0.031 Sum_probs=175.8
Q ss_pred CCCCCCceEEEEcCC--CCCCCCcccchhhHHHHHHHHhhcCcEEEE-cCHHHHHHHHHHHHhhC-------CCC----c
Q psy4251 20 ASTYNGCLAILCTGD--MEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ-NCWDKANDAISKILTEK-------PSA----Q 85 (292)
Q Consensus 20 ~~~l~g~~~vlItGa--~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~-r~~~~~~~~~~~l~~~~-------~~~----~ 85 (292)
..+|+||+++ |||| + +|||+++ +..|++.|+.|+. |+.++++++..++++.. +.. .
T Consensus 4 ~~~l~gk~al-ITGa~~s------~GIG~a~---A~~la~~Ga~Vv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (303)
T PLN02730 4 PIDLRGKRAF-IAGVADD------NGYGWAI---AKALAAAGAEILVGTWVPALNIFETSLRRGKFDESRKLPDGSLMEI 73 (303)
T ss_pred CcCCCCCEEE-EeCCCCC------CcHHHHH---HHHHHHCCCEEEEEeCcchhhHHHHhhhccccchhhhcccccccCc
Confidence 3569999999 9999 9 9999999 7778889988876 88888888887775321 111 2
Q ss_pred eEEEEccC--CC------------------hHHHHHHHHHHHHhCCCccEEEEccccc----CCCCCCCCcchhhhhhhh
Q psy4251 86 CIAMELDL--CR------------------LKSVKKFAEEYQKKFRSLNILVLNAGVF----GLGFSHTEDGFETTFQVN 141 (292)
Q Consensus 86 ~~~~~~Dl--s~------------------~~~v~~~~~~~~~~~~~id~lI~nAg~~----~~~~~~~~~~~~~~~~vN 141 (292)
...+++|+ ++ .++++++++++.+++++||+||||||+. .+..+.+.++|++++++|
T Consensus 74 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN 153 (303)
T PLN02730 74 TKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISAS 153 (303)
T ss_pred CeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHH
Confidence 46789999 43 3489999999999999999999999753 356778899999999999
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhh-hHHHHhHHHHHHHHHHHHhH
Q psy4251 142 HLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAM-TAYNDTKLCNVLFGEKLATL 220 (292)
Q Consensus 142 ~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~ 220 (292)
+.+++.++++++|.|.++ |+||++||..+..+. + .. ..|++||+++..|+++++.|
T Consensus 154 ~~~~~~l~~~~~p~m~~~----G~II~isS~a~~~~~------------p-------~~~~~Y~asKaAl~~l~~~la~E 210 (303)
T PLN02730 154 SYSFVSLLQHFGPIMNPG----GASISLTYIASERII------------P-------GYGGGMSSAKAALESDTRVLAFE 210 (303)
T ss_pred hHHHHHHHHHHHHHHhcC----CEEEEEechhhcCCC------------C-------CCchhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999753 899999998776543 1 33 47999999999999999999
Q ss_pred hcC-CCeEEEEecCCccc-cccccccccCCccchhhhh-hccc-cccCCHHHhhc------ccccCCCCCccc
Q psy4251 221 WYK-YKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWI-SRVR-PVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 221 ~~~-~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
+.+ +||+||+|+||+|+ +|.+..+.. ....... ...+ ....+|++.+. ++.....+|+.+
T Consensus 211 l~~~~gIrVn~V~PG~v~T~~~~~~~~~---~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l 280 (303)
T PLN02730 211 AGRKYKIRVNTISAGPLGSRAAKAIGFI---DDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATI 280 (303)
T ss_pred hCcCCCeEEEEEeeCCccCchhhccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEE
Confidence 985 79999999999999 887653110 0111111 0011 22457888776 445556677754
No 17
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=8.6e-33 Score=237.53 Aligned_cols=227 Identities=10% Similarity=-0.038 Sum_probs=170.8
Q ss_pred CCCCCCCceEEEEcCCCCCCCCcc--cchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCC
Q psy4251 19 PASTYNGCLAILCTGDMEFYPRYT--GLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLC 94 (292)
Q Consensus 19 ~~~~l~g~~~vlItGa~~~~~~~~--GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls 94 (292)
+..+++||+++ ||||+ + |||+++ +.+|++.|+.|+ .|+.+. .+..+++.+.. ....+++||++
T Consensus 4 ~~~~~~~k~~l-ItGas------~g~GIG~a~---a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~--~~~~~~~~D~~ 70 (258)
T PRK07533 4 PLLPLAGKRGL-VVGIA------NEQSIAWGC---ARAFRALGAELAVTYLNDKA-RPYVEPLAEEL--DAPIFLPLDVR 70 (258)
T ss_pred cccccCCCEEE-EECCC------CCCcHHHHH---HHHHHHcCCEEEEEeCChhh-HHHHHHHHHhh--ccceEEecCcC
Confidence 44668899999 99998 6 899999 555667787765 366432 22334444332 23567899999
Q ss_pred ChHHHHHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEE
Q psy4251 95 RLKSVKKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVV 168 (292)
Q Consensus 95 ~~~~v~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~ 168 (292)
|.++++++++++.++++++|++|||||+.. +..+.+.++|++++++|+.++++++++++|.|++ . ++||+
T Consensus 71 ~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~--g~Ii~ 146 (258)
T PRK07533 71 EPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--G--GSLLT 146 (258)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--C--CEEEE
Confidence 999999999999999999999999999853 3456788999999999999999999999999963 4 89999
Q ss_pred EcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccC
Q psy4251 169 VSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFG 247 (292)
Q Consensus 169 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~ 247 (292)
+||..+..+. + ....|++||+++.+|+++++.|+.++||+||+|+||+|+ ++.+......
T Consensus 147 iss~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~ 207 (258)
T PRK07533 147 MSYYGAEKVV------------E-------NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFD 207 (258)
T ss_pred EeccccccCC------------c-------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcH
Confidence 9998665432 2 567899999999999999999999999999999999999 8865432110
Q ss_pred -CccchhhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 248 -TPVRTFSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 248 -~~~~~~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
....+.... ......+|++.|. ++.....+|+.+
T Consensus 208 ~~~~~~~~~~--p~~r~~~p~dva~~~~~L~s~~~~~itG~~i 248 (258)
T PRK07533 208 ALLEDAAERA--PLRRLVDIDDVGAVAAFLASDAARRLTGNTL 248 (258)
T ss_pred HHHHHHHhcC--CcCCCCCHHHHHHHHHHHhChhhccccCcEE
Confidence 000111111 1123457888876 444556778755
No 18
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=9.4e-33 Score=239.11 Aligned_cols=227 Identities=12% Similarity=0.013 Sum_probs=168.5
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.++||+++ ||||+ .++|||+++ +..|++.|+.|+. |+. +.++..+++.+..+ .. .++++|++|.+++
T Consensus 2 ~l~~k~~l-ItGas----~~~GIG~ai---A~~la~~G~~Vil~~r~~-~~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v 70 (274)
T PRK08415 2 IMKGKKGL-IVGVA----NNKSIAYGI---AKACFEQGAELAFTYLNE-ALKKRVEPIAQELG-SD-YVYELDVSKPEHF 70 (274)
T ss_pred ccCCcEEE-EECCC----CCCCHHHHH---HHHHHHCCCEEEEEecCH-HHHHHHHHHHHhcC-Cc-eEEEecCCCHHHH
Confidence 35789999 99984 005999999 6667778877764 664 23344455544432 23 6789999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
+++++++.++++++|+||||||+.. +..+.+.++|++.+++|+.++++++++++|.|.+ . ++||++||.+
T Consensus 71 ~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~--g~Iv~isS~~ 146 (274)
T PRK08415 71 KSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--G--ASVLTLSYLG 146 (274)
T ss_pred HHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--C--CcEEEEecCC
Confidence 9999999999999999999999852 3457788999999999999999999999999964 3 8999999987
Q ss_pred cccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccch
Q psy4251 174 HRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRT 252 (292)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~ 252 (292)
+..+. + ....|++||+++.+|+++++.|+.++||+||+|+||+|+ ++.+..........+
T Consensus 147 ~~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~ 207 (274)
T PRK08415 147 GVKYV------------P-------HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKW 207 (274)
T ss_pred CccCC------------C-------cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhh
Confidence 65443 2 567899999999999999999999999999999999999 765432111000001
Q ss_pred hhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 253 FSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 253 ~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
...- -......+|++.|. ++.....+|+.+
T Consensus 208 ~~~~-~pl~r~~~pedva~~v~fL~s~~~~~itG~~i 243 (274)
T PRK08415 208 NEIN-APLKKNVSIEEVGNSGMYLLSDLSSGVTGEIH 243 (274)
T ss_pred hhhh-CchhccCCHHHHHHHHHHHhhhhhhcccccEE
Confidence 0000 01122467888887 344455677644
No 19
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=1e-32 Score=237.37 Aligned_cols=224 Identities=12% Similarity=0.079 Sum_probs=171.5
Q ss_pred CCCCCceEEEEcCCCCCCCCcc--cchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCCh
Q psy4251 21 STYNGCLAILCTGDMEFYPRYT--GLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~--GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
..++||+++ ||||+ + |||+++ +..|+++|+.|+. |+ ++.++..+++.+.. + ...++++|++|+
T Consensus 4 ~~~~~k~~l-ITGas------~~~GIG~a~---a~~la~~G~~v~~~~r~-~~~~~~~~~l~~~~-g-~~~~~~~Dv~~~ 70 (260)
T PRK06603 4 GLLQGKKGL-ITGIA------NNMSISWAI---AQLAKKHGAELWFTYQS-EVLEKRVKPLAEEI-G-CNFVSELDVTNP 70 (260)
T ss_pred cccCCcEEE-EECCC------CCcchHHHH---HHHHHHcCCEEEEEeCc-hHHHHHHHHHHHhc-C-CceEEEccCCCH
Confidence 456789999 99998 7 999999 6667778877764 55 34455566665543 2 234679999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVS 170 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vs 170 (292)
++++++++++.++++++|+||||||+.. +..+.+.++|++.+++|+.+++.+++.++|.|.+ . |+||++|
T Consensus 71 ~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~--G~Iv~is 146 (260)
T PRK06603 71 KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--G--GSIVTLT 146 (260)
T ss_pred HHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--C--ceEEEEe
Confidence 9999999999999999999999999753 3457788999999999999999999999999963 3 8999999
Q ss_pred CcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCc
Q psy4251 171 SESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTP 249 (292)
Q Consensus 171 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~ 249 (292)
|..+..+. + ....|++||+++..|+++++.|+.++||+||+|+||+|+ ++.+.... ..
T Consensus 147 S~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--~~ 205 (260)
T PRK06603 147 YYGAEKVI------------P-------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD--FS 205 (260)
T ss_pred cCccccCC------------C-------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC--cH
Confidence 98765443 2 567899999999999999999999999999999999999 87543211 00
Q ss_pred cchhhhhhcccc--ccCCHHHhhc------ccccCCCCCccc
Q psy4251 250 VRTFSWISRVRP--VTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 250 ~~~~~~~~~~~~--~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
..........| .+.+|++.|. ++.....+|+.+
T Consensus 206 -~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i 246 (260)
T PRK06603 206 -TMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIH 246 (260)
T ss_pred -HHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcceEE
Confidence 11111101112 2457888887 455566777744
No 20
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=100.00 E-value=1.1e-32 Score=236.92 Aligned_cols=230 Identities=12% Similarity=0.026 Sum_probs=175.5
Q ss_pred CCCCceEEEEcCC--CCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCH--HHHHHHHHHHHhhCCCCceEEEEccCCC
Q psy4251 22 TYNGCLAILCTGD--MEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCW--DKANDAISKILTEKPSAQCIAMELDLCR 95 (292)
Q Consensus 22 ~l~g~~~vlItGa--~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~ 95 (292)
+++||+++ |||| + +|||+++ +.++++.|+.|+. |+. .+.++..+++.+. ..++.++++|++|
T Consensus 3 ~l~~k~~l-ItGas~~------~GIG~ai---a~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d 70 (258)
T PRK07370 3 DLTGKKAL-VTGIANN------RSIAWGI---AQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQD 70 (258)
T ss_pred ccCCcEEE-EeCCCCC------CchHHHH---HHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCC
Confidence 46899999 9996 5 6999999 6667788887753 332 2455666666554 2357789999999
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEE
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVV 169 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~v 169 (292)
+++++++++++.++++++|+||||||+.. +..+.+.++|++.+++|+.++++++++++|.|.+ . ++||++
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~--g~Iv~i 146 (258)
T PRK07370 71 DAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--G--GSIVTL 146 (258)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--C--CeEEEE
Confidence 99999999999999999999999999752 4567788999999999999999999999999974 3 899999
Q ss_pred cCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC
Q psy4251 170 SSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT 248 (292)
Q Consensus 170 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~ 248 (292)
||..+..+. + ....|++||+++.+|+++++.|+.++||+||+|+||+|+ ++.+.... .
T Consensus 147 sS~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~--~ 205 (258)
T PRK07370 147 TYLGGVRAI------------P-------NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG--I 205 (258)
T ss_pred eccccccCC------------c-------ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc--c
Confidence 998766543 2 567899999999999999999999999999999999999 87643311 0
Q ss_pred ccchhhhhhcccc--ccCCHHHhhc------ccccCCCCCccc-cCCccc
Q psy4251 249 PVRTFSWISRVRP--VTNFQVDLTG------TAEKVGLSGLPD-SEWMWH 289 (292)
Q Consensus 249 ~~~~~~~~~~~~~--~~~~~~~~a~------~~~~~~~~G~~~-~~~~w~ 289 (292)
+ .....+....+ ...+|++.+. ++.....+|+.+ .|.-|+
T Consensus 206 ~-~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~ 254 (258)
T PRK07370 206 L-DMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYC 254 (258)
T ss_pred h-hhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCccc
Confidence 1 11111111112 2457888876 555667778743 344443
No 21
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-32 Score=236.46 Aligned_cols=236 Identities=13% Similarity=0.107 Sum_probs=183.2
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCCh
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
..+++||+++ ||||+ +|||+++ +.+|++.|+.|+. ++.+++++..+++.... +.++.++++|++|+
T Consensus 3 ~~~l~~k~vl-ItGas------~gIG~~i---a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~ 71 (260)
T PRK08416 3 SNEMKGKTLV-ISGGT------RGIGKAI---VYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEP 71 (260)
T ss_pred ccccCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCH
Confidence 3568899999 99999 9999999 6667778887763 46777777777776543 45889999999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccC--------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEE
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFG--------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVV 168 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~--------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~ 168 (292)
++++++++++.++++++|+||||||+.. +..+.+.++++..+++|+.+++.+++.++|.|.+.+. ++||+
T Consensus 72 ~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~ 149 (260)
T PRK08416 72 ETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGG--GSIIS 149 (260)
T ss_pred HHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCC--EEEEE
Confidence 9999999999999999999999998642 3345677899999999999999999999999987766 89999
Q ss_pred EcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccC
Q psy4251 169 VSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFG 247 (292)
Q Consensus 169 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~ 247 (292)
+||..+..+. + ....|++||++++.++++++.++.++||+||+|+||+++ ++.+.....
T Consensus 150 isS~~~~~~~------------~-------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~- 209 (260)
T PRK08416 150 LSSTGNLVYI------------E-------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY- 209 (260)
T ss_pred EeccccccCC------------C-------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-
Confidence 9998765443 2 567899999999999999999999999999999999999 876543221
Q ss_pred Cccchhhhhhcccc--ccCCHHHhhc------ccccCCCCCccc-cCCcccc
Q psy4251 248 TPVRTFSWISRVRP--VTNFQVDLTG------TAEKVGLSGLPD-SEWMWHY 290 (292)
Q Consensus 248 ~~~~~~~~~~~~~~--~~~~~~~~a~------~~~~~~~~G~~~-~~~~w~~ 290 (292)
...........+ .+.+|++.|. ++.....+|+.+ .+.-|++
T Consensus 210 --~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~ 259 (260)
T PRK08416 210 --EEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTTF 259 (260)
T ss_pred --HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCeec
Confidence 011111111112 2568888887 344455677754 3444443
No 22
>PRK07478 short chain dehydrogenase; Provisional
Probab=100.00 E-value=3e-32 Score=233.49 Aligned_cols=226 Identities=15% Similarity=0.165 Sum_probs=180.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++|+++ ||||+ +|||+++ +..|++.|+.|+ +|+.+++++..+++++. +.++.++++|+++.+++
T Consensus 3 ~~~~k~~l-ItGas------~giG~~i---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 70 (254)
T PRK07478 3 RLNGKVAI-ITGAS------SGIGRAA---AKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYA 70 (254)
T ss_pred CCCCCEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHH
Confidence 56789999 99999 9999999 555667777766 48888888888888765 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+++++++.++++++|+||||||+.. +..+.+.++|+.++++|+.+++.++++++|.|.++.. ++||++||..+..
T Consensus 71 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~--~~iv~~sS~~~~~ 148 (254)
T PRK07478 71 KALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGG--GSLIFTSTFVGHT 148 (254)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--ceEEEEechHhhc
Confidence 9999999999999999999999853 4456788899999999999999999999999988777 8999999987652
Q ss_pred -ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 177 -SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
+. + +...|++||+++..+++++++++.++||+||+|+||+++ ++.+..... + ....
T Consensus 149 ~~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~-~~~~ 206 (254)
T PRK07478 149 AGF------------P-------GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT--P-EALA 206 (254)
T ss_pred cCC------------C-------CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC--H-HHHH
Confidence 22 2 567899999999999999999999999999999999999 877654211 1 1111
Q ss_pred hhhcc--ccccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISRV--RPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~~--~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
++... .....+|++.|+ ++.....+|+.+
T Consensus 207 ~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~ 243 (254)
T PRK07478 207 FVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTAL 243 (254)
T ss_pred HHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeE
Confidence 11111 123568888887 334455677643
No 23
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=1.3e-32 Score=236.75 Aligned_cols=224 Identities=12% Similarity=0.026 Sum_probs=171.2
Q ss_pred CCCCceEEEEcCC--CCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 22 TYNGCLAILCTGD--MEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 22 ~l~g~~~vlItGa--~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
.++||+++ |||| + +|||+++ +.+|+++|+.|+. |+ ++.++..+++.+.. .....++||++|.+
T Consensus 3 ~~~~k~~l-ITGa~~~------~GIG~a~---a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~ 69 (261)
T PRK08690 3 FLQGKKIL-ITGMISE------RSIAYGI---AKACREQGAELAFTYVV-DKLEERVRKMAAEL--DSELVFRCDVASDD 69 (261)
T ss_pred ccCCcEEE-EECCCCC------CcHHHHH---HHHHHHCCCEEEEEcCc-HHHHHHHHHHHhcc--CCceEEECCCCCHH
Confidence 36899999 9996 6 7999999 6667788888774 43 44455556665443 23567899999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccCC-------CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFGL-------GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVS 170 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~~-------~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vs 170 (292)
+++++++++.+++++||+||||||+... ..+.+.+.|+..+++|+.++++++++++|.|.++ . ++||++|
T Consensus 70 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~--g~Iv~is 146 (261)
T PRK08690 70 EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-N--SAIVALS 146 (261)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-C--cEEEEEc
Confidence 9999999999999999999999998642 1345677899999999999999999999998654 4 8999999
Q ss_pred CcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCc
Q psy4251 171 SESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTP 249 (292)
Q Consensus 171 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~ 249 (292)
|.++..+. + +...|++||+++..|+++++.++.++||+||+|+||+|+ ++.+.....
T Consensus 147 s~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~--- 204 (261)
T PRK08690 147 YLGAVRAI------------P-------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF--- 204 (261)
T ss_pred ccccccCC------------C-------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch---
Confidence 98776543 2 567899999999999999999999999999999999999 876543210
Q ss_pred cchhhhhhcccc--ccCCHHHhhc------ccccCCCCCccc
Q psy4251 250 VRTFSWISRVRP--VTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 250 ~~~~~~~~~~~~--~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
......+....| .+.+|+|.|. ++.....+|+.+
T Consensus 205 ~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i 246 (261)
T PRK08690 205 GKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEIT 246 (261)
T ss_pred HHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcceeEE
Confidence 011111101112 2468888887 444556677755
No 24
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=1.4e-32 Score=235.97 Aligned_cols=224 Identities=9% Similarity=-0.001 Sum_probs=170.1
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC---HHHHHHHHHHHHhhCCCCceEEEEccCCCh
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC---WDKANDAISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
+++||+++ ||||+ .++|||+++ +.+|+++|+.|+. |+ .++++++.+++ .+.++.++++|++|.
T Consensus 4 ~~~~k~~l-ItGa~----~s~GIG~ai---a~~la~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~ 71 (257)
T PRK08594 4 SLEGKTYV-VMGVA----NKRSIAWGI---ARSLHNAGAKLVFTYAGERLEKEVRELADTL----EGQESLLLPCDVTSD 71 (257)
T ss_pred ccCCCEEE-EECCC----CCCCHHHHH---HHHHHHCCCEEEEecCcccchHHHHHHHHHc----CCCceEEEecCCCCH
Confidence 46799999 99984 005999999 6667788888764 43 23344433333 245788999999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVS 170 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vs 170 (292)
++++++++++.++++++|++|||||+.. +..+.+.++|+..+++|+.+++.++++++|.|.+ . |+||++|
T Consensus 72 ~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~--g~Iv~is 147 (257)
T PRK08594 72 EEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--G--GSIVTLT 147 (257)
T ss_pred HHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--C--ceEEEEc
Confidence 9999999999999999999999999753 3456788899999999999999999999999964 4 8999999
Q ss_pred CcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCc
Q psy4251 171 SESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTP 249 (292)
Q Consensus 171 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~ 249 (292)
|..+..+. + ....|++||+++..|+++++.|+.++||+||+|+||+++ ++.+..... .
T Consensus 148 S~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~--~ 206 (257)
T PRK08594 148 YLGGERVV------------Q-------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF--N 206 (257)
T ss_pred ccCCccCC------------C-------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc--c
Confidence 98776543 2 567899999999999999999999999999999999999 875432110 0
Q ss_pred cchhhhhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 250 VRTFSWISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 250 ~~~~~~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
........ ....+.+|++.|. ++.....+|+.+
T Consensus 207 -~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~ 247 (257)
T PRK08594 207 -SILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENI 247 (257)
T ss_pred -HHHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccceEE
Confidence 10111100 1122468888887 455566777744
No 25
>PRK05867 short chain dehydrogenase; Provisional
Probab=100.00 E-value=4.1e-32 Score=232.56 Aligned_cols=234 Identities=15% Similarity=0.158 Sum_probs=183.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||.++ +..|++.|+.|+ .|+.+++++..+++... +.++..+++|++|+++
T Consensus 5 ~~~~~k~vl-VtGas------~gIG~~i---a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~ 72 (253)
T PRK05867 5 FDLHGKRAL-ITGAS------TGIGKRV---ALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQ 72 (253)
T ss_pred ccCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHH
Confidence 357899999 99999 9999999 666777887776 48888888888888765 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~ 175 (292)
++++++++.++++++|+||||||... +..+.+.++|++.+++|+.+++.++++++|.|.++. . ++||++||..+.
T Consensus 73 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~ 150 (253)
T PRK05867 73 VTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQG--GVIINTASMSGH 150 (253)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCC--cEEEEECcHHhc
Confidence 99999999999999999999999863 455678889999999999999999999999997653 4 799999998765
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
....+ . ....|++||++++.+++++++++.++||+||+|+||+|+ ++.+..... ...+..
T Consensus 151 ~~~~~----------~-------~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~--~~~~~~ 211 (253)
T PRK05867 151 IINVP----------Q-------QVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY--QPLWEP 211 (253)
T ss_pred CCCCC----------C-------CccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH--HHHHHh
Confidence 32210 1 346899999999999999999999999999999999999 886543210 011111
Q ss_pred hhhccccccCCHHHhhc------ccccCCCCCccc-cCCccc
Q psy4251 255 WISRVRPVTNFQVDLTG------TAEKVGLSGLPD-SEWMWH 289 (292)
Q Consensus 255 ~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~-~~~~w~ 289 (292)
.. ....+.+|++.|. ++.....+|+.+ .|.-|+
T Consensus 212 ~~--~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~~ 251 (253)
T PRK05867 212 KI--PLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYT 251 (253)
T ss_pred cC--CCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCcc
Confidence 11 1123568898887 555667778754 344443
No 26
>KOG4169|consensus
Probab=100.00 E-value=2e-33 Score=225.45 Aligned_cols=213 Identities=17% Similarity=0.129 Sum_probs=174.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE-cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ-NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
+++||+++ +||+. +|||+++ ..+|...|+.+.+ -+..+.-+...+|++.+|..++.|++||+++..+++
T Consensus 2 ~~tGKna~-vtgga------gGIGl~~---sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~ 71 (261)
T KOG4169|consen 2 DLTGKNAL-VTGGA------GGIGLAT---SKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLE 71 (261)
T ss_pred cccCceEE-EecCC------chhhHHH---HHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHH
Confidence 67899999 99999 9999999 6667788766554 233333677788999999999999999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC-CCcEEEEEcCcccccccC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK-LFARVVVVSSESHRYSYI 179 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~-~~~~iV~vsS~~~~~~~~ 179 (292)
+.++++.+++|.||++||+||+. ++++|++++.+|+.|.+.-+...+|+|.+.+. +.|-||++||..+..+.
T Consensus 72 ~~f~ki~~~fg~iDIlINgAGi~------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~- 144 (261)
T KOG4169|consen 72 AAFDKILATFGTIDILINGAGIL------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM- 144 (261)
T ss_pred HHHHHHHHHhCceEEEEcccccc------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc-
Confidence 99999999999999999999997 57789999999999999999999999987652 23899999999988876
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc--CCCeEEEEecCCccc-ccccccccc----CCccch
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY--KYKIALSSRHCCWKI-TVSKKWWRF----GTPVRT 252 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~gi~v~~v~PG~v~-~~~~~~~~~----~~~~~~ 252 (292)
+ ..+.|++||+++..|+|++|.... +.||++++||||+++ ++.+..-.. ..-..+
T Consensus 145 -----------p-------~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~ 206 (261)
T KOG4169|consen 145 -----------P-------VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSI 206 (261)
T ss_pred -----------c-------cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHH
Confidence 3 678999999999999999987763 559999999999999 887765211 122233
Q ss_pred hhhhhccccccCCHHHhhc
Q psy4251 253 FSWISRVRPVTNFQVDLTG 271 (292)
Q Consensus 253 ~~~~~~~~~~~~~~~~~a~ 271 (292)
...+ ...-.+++..+++
T Consensus 207 ~~~l--~~~~~q~~~~~a~ 223 (261)
T KOG4169|consen 207 KEAL--ERAPKQSPACCAI 223 (261)
T ss_pred HHHH--HHcccCCHHHHHH
Confidence 3333 2222567777776
No 27
>PRK08589 short chain dehydrogenase; Validated
Probab=100.00 E-value=4.9e-32 Score=234.62 Aligned_cols=187 Identities=20% Similarity=0.249 Sum_probs=162.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||+++ +..|++.|+.|++ |+ +++++..+++.+. +.++.++++|+++.+++
T Consensus 3 ~l~~k~vl-ItGas------~gIG~ai---a~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~ 69 (272)
T PRK08589 3 RLENKVAV-ITGAS------TGIGQAS---AIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQV 69 (272)
T ss_pred CCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHH
Confidence 46799999 99999 9999999 6667777877764 77 7788888888654 45789999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
.++++++.++++++|+||||||+.. +..+.+.+.|++.+++|+.+++.++++++|+|.++. ++||++||..+..
T Consensus 70 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---g~iv~isS~~~~~ 146 (272)
T PRK08589 70 KDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG---GSIINTSSFSGQA 146 (272)
T ss_pred HHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---CEEEEeCchhhcC
Confidence 9999999999999999999999863 345667889999999999999999999999997653 8999999987766
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+. + ....|++||+++.+|++++++++.++||+||+|+||+|+ ++.+..
T Consensus 147 ~~------------~-------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~ 195 (272)
T PRK08589 147 AD------------L-------YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKL 195 (272)
T ss_pred CC------------C-------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhh
Confidence 54 2 567899999999999999999999999999999999999 887653
No 28
>PRK07791 short chain dehydrogenase; Provisional
Probab=100.00 E-value=3.5e-32 Score=237.09 Aligned_cols=188 Identities=16% Similarity=0.202 Sum_probs=160.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCH---------HHHHHHHHHHHhhCCCCceEEEE
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCW---------DKANDAISKILTEKPSAQCIAME 90 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~---------~~~~~~~~~l~~~~~~~~~~~~~ 90 (292)
.++||+++ ||||+ +|||+++ +.++++.|+.|+. ++. +++++..+++... +.++.+++
T Consensus 3 ~l~~k~~l-ITGas------~GIG~ai---a~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~ 70 (286)
T PRK07791 3 LLDGRVVI-VTGAG------GGIGRAH---ALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANG 70 (286)
T ss_pred ccCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEe
Confidence 36789999 99999 9999999 5666677877764 444 6777778888654 55788999
Q ss_pred ccCCChHHHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC----CCc
Q psy4251 91 LDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK----LFA 164 (292)
Q Consensus 91 ~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~----~~~ 164 (292)
+|++|.+++.++++++.+++++||+||||||+.. +..+.+.++|++.+++|+.++++++++++|+|.+... ..+
T Consensus 71 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g 150 (286)
T PRK07791 71 DDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDA 150 (286)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCc
Confidence 9999999999999999999999999999999863 4567788999999999999999999999999975421 127
Q ss_pred EEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 165 RVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 165 ~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+||++||.++..+. + +...|++||+++.+|+++++.|+.++||+||+|+|| +. ++..
T Consensus 151 ~Iv~isS~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~ 208 (286)
T PRK07791 151 RIINTSSGAGLQGS------------V-------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE 208 (286)
T ss_pred EEEEeCchhhCcCC------------C-------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch
Confidence 99999998877654 2 678999999999999999999999999999999999 77 7654
No 29
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=2.2e-32 Score=234.76 Aligned_cols=220 Identities=11% Similarity=-0.035 Sum_probs=166.4
Q ss_pred CCCCceEEEEcCC--CCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCH--HHHHHHHHHHHhhCCCCceEEEEccCCC
Q psy4251 22 TYNGCLAILCTGD--MEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCW--DKANDAISKILTEKPSAQCIAMELDLCR 95 (292)
Q Consensus 22 ~l~g~~~vlItGa--~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~ 95 (292)
+++||+++ |||| + +|||+++ +.+|++.|+.|+. |+. +..++..+++ +.++.++++|++|
T Consensus 4 ~~~~k~~l-ItGa~~s------~GIG~a~---a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~ 68 (256)
T PRK07889 4 LLEGKRIL-VTGVITD------SSIAFHV---ARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTN 68 (256)
T ss_pred cccCCEEE-EeCCCCc------chHHHHH---HHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCC
Confidence 47789999 9999 8 9999999 6667788888775 442 3334433333 2367789999999
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEE
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVV 169 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~v 169 (292)
+++++++++++.++++++|+||||||+.. +..+.+.++|++++++|+.+++++++.++|+|.+ . ++||++
T Consensus 69 ~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~--g~Iv~i 144 (256)
T PRK07889 69 EEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--G--GSIVGL 144 (256)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--C--ceEEEE
Confidence 99999999999999999999999999863 2345677889999999999999999999999973 3 899999
Q ss_pred cCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC
Q psy4251 170 SSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT 248 (292)
Q Consensus 170 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~ 248 (292)
++... .+. + .+..|++||+++.+|+++++.|+.++||+||+|+||+++ ++.+.....
T Consensus 145 s~~~~-~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-- 202 (256)
T PRK07889 145 DFDAT-VAW------------P-------AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-- 202 (256)
T ss_pred eeccc-ccC------------C-------ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc--
Confidence 86532 211 2 566799999999999999999999999999999999999 886543211
Q ss_pred ccchhhhh-hccc-c-ccCCHHHhhc------ccccCCCCCccc
Q psy4251 249 PVRTFSWI-SRVR-P-VTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 249 ~~~~~~~~-~~~~-~-~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
......+ ...+ . ...+|++.|. ++.....+|+.+
T Consensus 203 -~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i 245 (256)
T PRK07889 203 -ELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIV 245 (256)
T ss_pred -HHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccccccceEE
Confidence 0111111 1111 1 2468898887 444556677755
No 30
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=3.3e-32 Score=234.18 Aligned_cols=222 Identities=11% Similarity=0.039 Sum_probs=169.2
Q ss_pred CCCceEEEEcCCCCCCCCcc--cchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYT--GLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~--GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++||+++ ||||+ + |||+++ +.+|+++|+.|+. |+ ++.++..+++.... ..+.+++||++|.++
T Consensus 4 l~~k~~l-ITGas------~~~GIG~ai---a~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~ 70 (262)
T PRK07984 4 LSGKRIL-VTGVA------SKLSIAYGI---AQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDAS 70 (262)
T ss_pred cCCCEEE-EeCCC------CCccHHHHH---HHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHH
Confidence 6789999 99998 7 999999 6667788888764 55 45556666776553 356788999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCC-------CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcC
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGL-------GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSS 171 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~-------~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS 171 (292)
++++++++.++++++|++|||||+... ..+.+.++|+..+++|+.+++.+++.+.|.+. +. ++||++||
T Consensus 71 v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~--g~Iv~iss 146 (262)
T PRK07984 71 IDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PG--SALLTLSY 146 (262)
T ss_pred HHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CC--cEEEEEec
Confidence 999999999999999999999998532 23467789999999999999999999998764 34 89999999
Q ss_pred cccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCcc
Q psy4251 172 ESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPV 250 (292)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~ 250 (292)
..+..+. + ....|++||+++.+|+++++.|+.++||+||+|+||+|+ ++.+..... .
T Consensus 147 ~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~---~ 204 (262)
T PRK07984 147 LGAERAI------------P-------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF---R 204 (262)
T ss_pred CCCCCCC------------C-------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCch---H
Confidence 8765443 2 567899999999999999999999999999999999999 765432110 0
Q ss_pred chhhhhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 251 RTFSWISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 251 ~~~~~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
........ ......+|++.+. ++.....+|+.+
T Consensus 205 ~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i 245 (262)
T PRK07984 205 KMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVV 245 (262)
T ss_pred HHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEE
Confidence 11111100 1123467888876 344455677654
No 31
>PRK07062 short chain dehydrogenase; Provisional
Probab=100.00 E-value=6.6e-32 Score=232.78 Aligned_cols=191 Identities=18% Similarity=0.138 Sum_probs=168.1
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +.++++.|+.|+ .|+.+++++..+++.+..++.++.++++|++|.++
T Consensus 4 ~~l~~k~~l-ItGas------~giG~~i---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 73 (265)
T PRK07062 4 IQLEGRVAV-VTGGS------SGIGLAT---VELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEAD 73 (265)
T ss_pred cccCCCEEE-EeCCC------chHHHHH---HHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHH
Confidence 467899999 99999 9999999 555667777765 48888898888888877666689999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++++++++.++++++|+||||||... +..+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+..
T Consensus 74 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~ 151 (265)
T PRK07062 74 VAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAA--ASIVCVNSLLALQ 151 (265)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCC--cEEEEeccccccC
Confidence 99999999999999999999999853 4566788899999999999999999999999988766 9999999988765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + ....|+++|+++.+++++++.|+.++||+||+|+||+|+ ++...
T Consensus 152 ~~------------~-------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~ 199 (265)
T PRK07062 152 PE------------P-------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRR 199 (265)
T ss_pred CC------------C-------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhh
Confidence 54 2 567899999999999999999999999999999999999 87643
No 32
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=6e-32 Score=232.49 Aligned_cols=224 Identities=12% Similarity=-0.027 Sum_probs=166.7
Q ss_pred CCCCceEEEEcCC--CCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 22 TYNGCLAILCTGD--MEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 22 ~l~g~~~vlItGa--~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
.++||+++ |||| + +|||+++ +.++++.|+.|+. |. ++.++..+++.+..+ ....+++|++|++
T Consensus 3 ~l~~k~vl-ItGas~~------~GIG~a~---a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~ 69 (260)
T PRK06997 3 FLAGKRIL-ITGLLSN------RSIAYGI---AKACKREGAELAFTYVG-DRFKDRITEFAAEFG--SDLVFPCDVASDE 69 (260)
T ss_pred ccCCcEEE-EeCCCCC------CcHHHHH---HHHHHHCCCeEEEEccc-hHHHHHHHHHHHhcC--CcceeeccCCCHH
Confidence 36789999 9996 6 8999999 6667788888764 22 223333444444332 2346899999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccCC-------CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFGL-------GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVS 170 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~~-------~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vs 170 (292)
+++++++++.++++++|++|||||+... ..+.+.++|+..+++|+.++++++++++|+|. +. ++||++|
T Consensus 70 ~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~--g~Ii~is 145 (260)
T PRK06997 70 QIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DD--ASLLTLS 145 (260)
T ss_pred HHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CC--ceEEEEe
Confidence 9999999999999999999999998632 13467789999999999999999999999994 34 8999999
Q ss_pred CcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC-
Q psy4251 171 SESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT- 248 (292)
Q Consensus 171 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~- 248 (292)
|..+..+. + ....|++||+++..|+++++.|+.++||+||+|+||+|+ ++.+.......
T Consensus 146 s~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~ 206 (260)
T PRK06997 146 YLGAERVV------------P-------NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKI 206 (260)
T ss_pred ccccccCC------------C-------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhH
Confidence 98765443 2 566899999999999999999999999999999999999 77543211000
Q ss_pred ccchhhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 249 PVRTFSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
........ ......+|++.+. ++.....+|+.+
T Consensus 207 ~~~~~~~~--p~~r~~~pedva~~~~~l~s~~~~~itG~~i 245 (260)
T PRK06997 207 LDFVESNA--PLRRNVTIEEVGNVAAFLLSDLASGVTGEIT 245 (260)
T ss_pred HHHHHhcC--cccccCCHHHHHHHHHHHhCccccCcceeEE
Confidence 00111111 1123468888887 444556677654
No 33
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=100.00 E-value=8.3e-32 Score=230.73 Aligned_cols=229 Identities=16% Similarity=0.218 Sum_probs=179.1
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
..+++||+++ |||++ +|||+++ +.+|++.|+.|+..+....++..+++.+. +.++.++++|++|.+++
T Consensus 5 ~~~l~~k~~l-ItG~~------~gIG~a~---a~~l~~~G~~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~ 72 (253)
T PRK08993 5 AFSLEGKVAV-VTGCD------TGLGQGM---ALGLAEAGCDIVGINIVEPTETIEQVTAL--GRRFLSLTADLRKIDGI 72 (253)
T ss_pred ccCCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEecCcchHHHHHHHHhc--CCeEEEEECCCCCHHHH
Confidence 3568899999 99999 9999999 66677888888764433345555666544 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~ 176 (292)
+++++++.++++++|++|||||... +..+.+.++|++.+++|+.+++.++++++|.|.+++ . ++||++||..+..
T Consensus 73 ~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--g~iv~isS~~~~~ 150 (253)
T PRK08993 73 PALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNG--GKIINIASMLSFQ 150 (253)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC--eEEEEECchhhcc
Confidence 9999999999999999999999863 456678889999999999999999999999997653 5 8999999987766
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC-ccchhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT-PVRTFS 254 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~-~~~~~~ 254 (292)
+. + ....|+.+|++++.++++++.++.++||+||+|+||+++ ++......... ...+..
T Consensus 151 ~~------------~-------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~ 211 (253)
T PRK08993 151 GG------------I-------RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD 211 (253)
T ss_pred CC------------C-------CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh
Confidence 54 2 456899999999999999999999999999999999999 87654321100 011111
Q ss_pred hhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.+ ....+.+|++.|. ++.....+|+.+
T Consensus 212 ~~--p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~ 244 (253)
T PRK08993 212 RI--PAGRWGLPSDLMGPVVFLASSASDYINGYTI 244 (253)
T ss_pred cC--CCCCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence 11 1123568888887 455566777754
No 34
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=7.7e-32 Score=233.25 Aligned_cols=226 Identities=12% Similarity=0.044 Sum_probs=169.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
..++||+++ ||||+ .++|||+++ +..|+++|+.|+. |+ ++..+..+++.+.. .....+++|++|+++
T Consensus 6 ~~~~~k~~l-ItGas----~~~GIG~ai---a~~la~~G~~V~l~~r~-~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~ 74 (272)
T PRK08159 6 GLMAGKRGL-ILGVA----NNRSIAWGI---AKACRAAGAELAFTYQG-DALKKRVEPLAAEL--GAFVAGHCDVTDEAS 74 (272)
T ss_pred ccccCCEEE-EECCC----CCCcHHHHH---HHHHHHCCCEEEEEcCc-hHHHHHHHHHHHhc--CCceEEecCCCCHHH
Confidence 346789998 99983 006999999 6667788888764 54 23334444454443 235678999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
++++++++.++++++|+||||||+.. +..+.+.++|++.+++|+.+++.++++++|.|.+ . |+||++||.
T Consensus 75 v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~--g~Iv~iss~ 150 (272)
T PRK08159 75 IDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--G--GSILTLTYY 150 (272)
T ss_pred HHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--C--ceEEEEecc
Confidence 99999999999999999999999863 3456788899999999999999999999999963 3 899999997
Q ss_pred ccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccc
Q psy4251 173 SHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVR 251 (292)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~ 251 (292)
++..+. + ....|++||+++..|+++++.|+.++||+||+|+||+++ ++.+..... ..
T Consensus 151 ~~~~~~------------p-------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~---~~ 208 (272)
T PRK08159 151 GAEKVM------------P-------HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDF---RY 208 (272)
T ss_pred ccccCC------------C-------cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcc---hH
Confidence 665433 2 567899999999999999999999999999999999999 765432111 01
Q ss_pred hhhhhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 252 TFSWISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 252 ~~~~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
...+... ......+|+|.|. ++.....+|+.+
T Consensus 209 ~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i 248 (272)
T PRK08159 209 ILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVH 248 (272)
T ss_pred HHHHHHhCCcccccCCHHHHHHHHHHHhCccccCccceEE
Confidence 1111100 1112468898887 445566777754
No 35
>PRK06139 short chain dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-31 Score=235.95 Aligned_cols=189 Identities=13% Similarity=0.061 Sum_probs=166.2
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++++|+++ ||||+ +|||+++ +..+++.|+.|+ .|+.++++++.+++++. +.++.++++|++|.++
T Consensus 3 ~~l~~k~vl-ITGAs------~GIG~ai---a~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~ 70 (330)
T PRK06139 3 GPLHGAVVV-ITGAS------SGIGQAT---AEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQ 70 (330)
T ss_pred cCCCCCEEE-EcCCC------CHHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHH
Confidence 357789999 99999 9999999 555667777765 49999999998888765 5688899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++++++++.+.+++||++|||||+.. +..+.+.+++++.+++|+++++.+++.++|+|.++.. ++||+++|..+..
T Consensus 71 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~--g~iV~isS~~~~~ 148 (330)
T PRK06139 71 VKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGH--GIFINMISLGGFA 148 (330)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCC--CEEEEEcChhhcC
Confidence 99999999998899999999999863 4667788999999999999999999999999988776 9999999988776
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCC-CeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKY-KIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~-gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + ....|++||+++.+|+++++.|+... ||+|++|+||+++ ++.++
T Consensus 149 ~~------------p-------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~ 197 (330)
T PRK06139 149 AQ------------P-------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH 197 (330)
T ss_pred CC------------C-------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc
Confidence 54 2 56789999999999999999999875 8999999999999 87654
No 36
>PRK06114 short chain dehydrogenase; Provisional
Probab=100.00 E-value=2e-31 Score=228.49 Aligned_cols=230 Identities=14% Similarity=0.125 Sum_probs=178.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCH-HHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCW-DKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
.+++||+++ |||++ +|||+++ +.+|.+.|+.|++ |+. +.+++..+++... +.++.++++|++|++
T Consensus 4 ~~~~~k~~l-VtG~s------~gIG~~i---a~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~ 71 (254)
T PRK06114 4 FDLDGQVAF-VTGAG------SGIGQRI---AIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKA 71 (254)
T ss_pred cCCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence 457899999 99999 9999999 5556677877764 553 4567777777655 457889999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+++++++++.+++++||+||||||+.. +..+.+.++|++++++|+.++++++++++|.|.++.. ++||++||.++.
T Consensus 72 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~isS~~~~ 149 (254)
T PRK06114 72 DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGG--GSIVNIASMSGI 149 (254)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC--cEEEEECchhhc
Confidence 999999999999999999999999863 4566788999999999999999999999999987766 899999998876
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
.+... . ....|+++|+++..++++++.++.++||+||+|+||+++ ++.+..........+..
T Consensus 150 ~~~~~----------~-------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~ 212 (254)
T PRK06114 150 IVNRG----------L-------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEE 212 (254)
T ss_pred CCCCC----------C-------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHh
Confidence 54310 0 256899999999999999999999999999999999999 87653111000001111
Q ss_pred hhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.. ...-..+|++.+. ++.....+|+.+
T Consensus 213 ~~--p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i 245 (254)
T PRK06114 213 QT--PMQRMAKVDEMVGPAVFLLSDAASFCTGVDL 245 (254)
T ss_pred cC--CCCCCcCHHHHHHHHHHHcCccccCcCCceE
Confidence 11 1122457888886 455567777654
No 37
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=100.00 E-value=3.6e-31 Score=227.22 Aligned_cols=223 Identities=17% Similarity=0.111 Sum_probs=174.5
Q ss_pred CCCCceEEEEcCCCCCCCCcc--cchhhHHHHHHHHhhcCcEEEE--c-----------CHHHHHHHHHHHHhhCCCCce
Q psy4251 22 TYNGCLAILCTGDMEFYPRYT--GLKKKDGNLCFDLVQSSKLFYQ--N-----------CWDKANDAISKILTEKPSAQC 86 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~--GiG~~~a~~~~~l~~~g~~v~~--r-----------~~~~~~~~~~~l~~~~~~~~~ 86 (292)
+|+||+++ ||||+ + |||+++ +.+++++|+.|+. | +.++.++..+++.+. +.++
T Consensus 3 ~l~~k~vl-VtGas------~~~giG~~~---a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~ 70 (256)
T PRK12859 3 QLKNKVAV-VTGVS------RLDGIGAAI---CKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKV 70 (256)
T ss_pred CcCCcEEE-EECCC------CCCChHHHH---HHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeE
Confidence 58899999 99997 6 999999 5556677877664 1 133344555666554 5689
Q ss_pred EEEEccCCChHHHHHHHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCc
Q psy4251 87 IAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFA 164 (292)
Q Consensus 87 ~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~ 164 (292)
.++++|+++.+++.++++++.++++++|++|||||.. .+..+.+.++|+.++++|+.+++.++++++|.|.++.. +
T Consensus 71 ~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g 148 (256)
T PRK12859 71 SSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSG--G 148 (256)
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC--e
Confidence 9999999999999999999999999999999999975 34567889999999999999999999999999987766 9
Q ss_pred EEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 165 RVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 165 ~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+||++||..+..+. + +...|+++|+++..|+++++.++.++||+||+|+||+++ ++....
T Consensus 149 ~iv~isS~~~~~~~------------~-------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~ 209 (256)
T PRK12859 149 RIINMTSGQFQGPM------------V-------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE 209 (256)
T ss_pred EEEEEcccccCCCC------------C-------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH
Confidence 99999998766543 2 678999999999999999999999999999999999999 764321
Q ss_pred cccCCccchhhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 244 WRFGTPVRTFSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
... .+.... ....+.+|++.++ .+.....+|+++
T Consensus 210 ~~~----~~~~~~--~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i 249 (256)
T PRK12859 210 IKQ----GLLPMF--PFGRIGEPKDAARLIKFLASEEAEWITGQII 249 (256)
T ss_pred HHH----HHHhcC--CCCCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence 110 111111 1122457888877 344456677754
No 38
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.98 E-value=6e-31 Score=232.19 Aligned_cols=247 Identities=23% Similarity=0.226 Sum_probs=177.0
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC-cEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS-KLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g-~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.+|+++ ||||+ +|||+++ +.+|++.| +.|+ +|+.++++++.+++... +.++.++++|+++.++++
T Consensus 2 ~~k~vl-ITGas------~GIG~ai---a~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~ 69 (314)
T TIGR01289 2 QKPTVI-ITGAS------SGLGLYA---AKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVR 69 (314)
T ss_pred CCCEEE-EECCC------ChHHHHH---HHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHH
Confidence 478888 99999 9999999 55566777 6665 58888888888777532 457889999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccCC---CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGL---GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
++++++.+.+++||++|||||+..+ ..+.+.++|+.++++|+.+++++++.++|.|.+++...++||++||.++...
T Consensus 70 ~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~ 149 (314)
T TIGR01289 70 QFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTN 149 (314)
T ss_pred HHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccc
Confidence 9999999888999999999998643 2356788999999999999999999999999876311189999999977543
Q ss_pred cCC---CCCCCccccC-----------cCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc-CCCeEEEEecCCcc-c-ccc
Q psy4251 178 YIT---KDTISKSVLS-----------VENYSDFWAMTAYNDTKLCNVLFGEKLATLWY-KYKIALSSRHCCWK-I-TVS 240 (292)
Q Consensus 178 ~~~---~~~~~~~~~~-----------~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~PG~v-~-~~~ 240 (292)
... ....+++++. ......+.+..+|++||+++..+++++++++. +.||+|++|+||+| . ++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~ 229 (314)
T TIGR01289 150 TLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLF 229 (314)
T ss_pred cCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccc
Confidence 110 0011122111 00123455778999999999999999999985 46899999999999 5 776
Q ss_pred ccccccCCccchhhhh-hccccccCCHHHhhc------ccccCCCCCcccc
Q psy4251 241 KKWWRFGTPVRTFSWI-SRVRPVTNFQVDLTG------TAEKVGLSGLPDS 284 (292)
Q Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~------~~~~~~~~G~~~~ 284 (292)
++.... ...+..++ ........+++++|. .......+|.||.
T Consensus 230 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~ 278 (314)
T TIGR01289 230 REHVPL--FRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWS 278 (314)
T ss_pred ccccHH--HHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeee
Confidence 542110 00011111 001122468888876 2222235788885
No 39
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.98 E-value=2.6e-31 Score=234.71 Aligned_cols=186 Identities=17% Similarity=0.175 Sum_probs=153.6
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|++++ ||||+ +|||+++ +.+++++|+.|+ .|+.++++++.+++.+..++.++..+.+|+++ ++.+
T Consensus 52 ~g~~~l-ITGAs------~GIG~al---A~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~ 119 (320)
T PLN02780 52 YGSWAL-VTGPT------DGIGKGF---AFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDE 119 (320)
T ss_pred cCCEEE-EeCCC------cHHHHHH---HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHH
Confidence 689998 99999 9999999 555667776665 59999999999999877655688899999985 2333
Q ss_pred HHHHHHHhCC--CccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 102 FAEEYQKKFR--SLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 102 ~~~~~~~~~~--~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
.++++.+..+ ++|++|||||+.. ++.+.+.+++++++++|+.|++.+++.++|.|.+++. |+||++||.++.
T Consensus 120 ~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~--g~IV~iSS~a~~ 197 (320)
T PLN02780 120 GVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKK--GAIINIGSGAAI 197 (320)
T ss_pred HHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC--cEEEEEechhhc
Confidence 3444444333 5779999999863 3456788899999999999999999999999988777 999999998775
Q ss_pred c-ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 176 Y-SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 176 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
. +.. + ....|++||+++..|+++++.|+.++||+|++|+||+|+ ++..
T Consensus 198 ~~~~~-----------p-------~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~ 247 (320)
T PLN02780 198 VIPSD-----------P-------LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS 247 (320)
T ss_pred cCCCC-----------c-------cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence 4 211 2 567999999999999999999999999999999999999 8865
No 40
>KOG0725|consensus
Probab=99.98 E-value=4.4e-31 Score=226.51 Aligned_cols=189 Identities=21% Similarity=0.203 Sum_probs=165.0
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCC-CCceEEEEccCCCh
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKP-SAQCIAMELDLCRL 96 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~ 96 (292)
...|.||+++ |||++ +|||+++ +.+|+..|+.|+ .|+.+++++.++++..... +.++..+.||+++.
T Consensus 3 ~~~l~gkval-VTG~s------~GIG~ai---a~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 72 (270)
T KOG0725|consen 3 GGRLAGKVAL-VTGGS------SGIGKAI---ALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKE 72 (270)
T ss_pred CccCCCcEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCH
Confidence 3568999999 99999 9999999 666777787766 4999999999988876533 45799999999999
Q ss_pred HHHHHHHHHHHHh-CCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhH-HHHHHHHHHHHHHhcCCCCcEEEEEcC
Q psy4251 97 KSVKKFAEEYQKK-FRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLA-HFYLTLQLENALIKGAKLFARVVVVSS 171 (292)
Q Consensus 97 ~~v~~~~~~~~~~-~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~-~~~l~~~ll~~l~~~~~~~~~iV~vsS 171 (292)
++++++++...++ +|+||+||||||... +..+.+.+.|+..+++|+.| .+.+.+.+.|+++++.. +.|+++||
T Consensus 73 ~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~g--g~I~~~ss 150 (270)
T KOG0725|consen 73 VDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKG--GSIVNISS 150 (270)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCC--ceEEEEec
Confidence 9999999999998 799999999999874 46888999999999999995 67777778888888777 99999999
Q ss_pred cccccccCCCCCCCccccCcCCCCCChhh-hHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 172 ESHRYSYITKDTISKSVLSVENYSDFWAM-TAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
.++..+.. +. ..|+++|+++..|++++|.||.++|||||+|.||.+. ++
T Consensus 151 ~~~~~~~~-------------------~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 151 VAGVGPGP-------------------GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred cccccCCC-------------------CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 98776542 22 7899999999999999999999999999999999999 88
No 41
>PRK05599 hypothetical protein; Provisional
Probab=99.98 E-value=6.2e-31 Score=224.43 Aligned_cols=199 Identities=16% Similarity=0.127 Sum_probs=163.8
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
++++ ||||+ +|||+++|+. ++ +|..|+ .|+.++++++.+++++.. ..++.+++||++|.+++++++
T Consensus 1 ~~vl-ItGas------~GIG~aia~~---l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~ 68 (246)
T PRK05599 1 MSIL-ILGGT------SDIAGEIATL---LC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELV 68 (246)
T ss_pred CeEE-EEeCc------cHHHHHHHHH---Hh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHH
Confidence 3577 99999 9999999555 44 366555 489999999999887653 235788999999999999999
Q ss_pred HHHHHhCCCccEEEEcccccCC--CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccccccCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFGL--GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~~~~ 180 (292)
+++.+.++++|++|||||+... ..+.+.+.+++.+++|+.+++.+++.++|.|.++. . ++||++||..+..+.
T Consensus 69 ~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~--g~Iv~isS~~~~~~~-- 144 (246)
T PRK05599 69 KQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAP--AAIVAFSSIAGWRAR-- 144 (246)
T ss_pred HHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCC--CEEEEEeccccccCC--
Confidence 9999999999999999998642 33456667788899999999999999999997653 5 899999999877654
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhhcc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISRV 259 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~~ 259 (292)
+ +...|++||+++.+|+++++.|+.++||+||+|+||+|+ ++.......
T Consensus 145 ----------~-------~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~------------- 194 (246)
T PRK05599 145 ----------R-------ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA------------- 194 (246)
T ss_pred ----------c-------CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC-------------
Confidence 2 567899999999999999999999999999999999999 876443211
Q ss_pred ccccCCHHHhhc
Q psy4251 260 RPVTNFQVDLTG 271 (292)
Q Consensus 260 ~~~~~~~~~~a~ 271 (292)
++..+|++.|.
T Consensus 195 -~~~~~pe~~a~ 205 (246)
T PRK05599 195 -PMSVYPRDVAA 205 (246)
T ss_pred -CCCCCHHHHHH
Confidence 12358888887
No 42
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.98 E-value=6.1e-31 Score=221.65 Aligned_cols=181 Identities=12% Similarity=0.069 Sum_probs=157.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||+++ +.+|++.|+.|+. |+.+++++..+++.+. +.++..+++|+++.+++
T Consensus 2 ~~~~k~~l-VtGas------~GIG~ai---a~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~ 69 (227)
T PRK08862 2 DIKSSIIL-ITSAG------SVLGRTI---SCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESI 69 (227)
T ss_pred CCCCeEEE-EECCc------cHHHHHH---HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHH
Confidence 57899999 99999 9999999 6667788888764 8899999988888765 45788899999999999
Q ss_pred HHHHHHHHHhCC-CccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccc
Q psy4251 100 KKFAEEYQKKFR-SLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESH 174 (292)
Q Consensus 100 ~~~~~~~~~~~~-~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~ 174 (292)
+++++++.++++ +||++|||||... +..+.+.++|.+.+++|+.+++.+++.++|+|.+++ . |+||++||..+
T Consensus 70 ~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~--g~Iv~isS~~~ 147 (227)
T PRK08862 70 RHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKK--GVIVNVISHDD 147 (227)
T ss_pred HHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--ceEEEEecCCC
Confidence 999999999998 9999999998642 345667788999999999999999999999998653 5 89999999643
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-c
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-T 238 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~ 238 (292)
. + +...|+++|+++.+|+++++.|+.++||+||+|+||+++ +
T Consensus 148 ~---------------~-------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 148 H---------------Q-------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred C---------------C-------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 2 1 456799999999999999999999999999999999999 6
No 43
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.98 E-value=6.4e-31 Score=227.90 Aligned_cols=188 Identities=16% Similarity=0.136 Sum_probs=164.8
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||+++ +.+|+..|+.|+ .|+.+++++..+++... +.++.++++|++|.+++
T Consensus 3 ~~~~k~vl-VTGas------~gIG~al---a~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v 70 (275)
T PRK05876 3 GFPGRGAV-ITGGA------SGIGLAT---GTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEV 70 (275)
T ss_pred CcCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHH
Confidence 47899999 99999 9999999 555667777765 48888888888888655 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~ 176 (292)
.++++++.++++++|+||||||+. .+..+.+.++|+..+++|+.+++.+++.++|.|.++. . ++||++||..+..
T Consensus 71 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~--g~iv~isS~~~~~ 148 (275)
T PRK05876 71 THLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTG--GHVVFTASFAGLV 148 (275)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC--CEEEEeCChhhcc
Confidence 999999999999999999999985 3566778899999999999999999999999997654 5 8999999998776
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + +...|++||+++.+|+++++.++..+||+|++|+||+++ ++..+
T Consensus 149 ~~------------~-------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 196 (275)
T PRK05876 149 PN------------A-------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN 196 (275)
T ss_pred CC------------C-------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence 54 2 677899999999999999999998889999999999999 87654
No 44
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.98 E-value=4e-31 Score=231.60 Aligned_cols=189 Identities=19% Similarity=0.191 Sum_probs=164.0
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
..+++||+++ ||||+ +|||+++ +..+++.|+.|+ .|+.++++++.+++.. +.++..++||++|.+
T Consensus 4 ~~~l~gk~vl-ItGas------~gIG~~i---a~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~ 70 (296)
T PRK05872 4 MTSLAGKVVV-VTGAA------RGIGAEL---ARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLA 70 (296)
T ss_pred CCCCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHH
Confidence 4568899999 99999 9999999 555667777765 4888888887777642 346778889999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+++++++++.++++++|+||||||+.. +..+.+.++|++++++|+.+++.+++.++|.|.+. . ++||++||.++.
T Consensus 71 ~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~--g~iv~isS~~~~ 147 (296)
T PRK05872 71 AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-R--GYVLQVSSLAAF 147 (296)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C--CEEEEEeCHhhc
Confidence 999999999999999999999999863 56677889999999999999999999999998764 3 899999999877
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
.+. + +...|++||++++.|+++++.++..+||+|++++||+++ ++.+..
T Consensus 148 ~~~------------~-------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~ 197 (296)
T PRK05872 148 AAA------------P-------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA 197 (296)
T ss_pred CCC------------C-------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc
Confidence 654 2 678999999999999999999999999999999999999 887653
No 45
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.98 E-value=1.1e-30 Score=225.17 Aligned_cols=239 Identities=13% Similarity=0.105 Sum_probs=186.5
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++.+|+++ |||++ +|||+++ +.+|++.|+.|+ .|+.+++++..+++.+. +.++.++++|+++.++
T Consensus 6 ~~~~~k~~l-ItGa~------~~iG~~i---a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~ 73 (265)
T PRK07097 6 FSLKGKIAL-ITGAS------YGIGFAI---AKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDG 73 (265)
T ss_pred cCCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence 357899999 99999 9999999 555666777765 48888888888777654 4579999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++++++++.++++++|+||||||+.. +..+.+.+++++.+++|+.+++.+++.++|+|.+++. ++||++||..+..
T Consensus 74 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~isS~~~~~ 151 (265)
T PRK07097 74 VQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGH--GKIINICSMMSEL 151 (265)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC--cEEEEEcCccccC
Confidence 99999999999999999999999864 4566788999999999999999999999999987766 9999999987665
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccc---cCCccch
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWR---FGTPVRT 252 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~---~~~~~~~ 252 (292)
+. + +...|+++|+++..+++++++++.++||+||+|+||.++ ++...... .+....+
T Consensus 152 ~~------------~-------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 212 (265)
T PRK07097 152 GR------------E-------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPF 212 (265)
T ss_pred CC------------C-------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhH
Confidence 43 2 567899999999999999999999999999999999999 76654311 0011111
Q ss_pred hhhhhcc--ccccCCHHHhhc------ccccCCCCCccc-cCCccccCC
Q psy4251 253 FSWISRV--RPVTNFQVDLTG------TAEKVGLSGLPD-SEWMWHYQY 292 (292)
Q Consensus 253 ~~~~~~~--~~~~~~~~~~a~------~~~~~~~~G~~~-~~~~w~~~~ 292 (292)
..++... ...+.+|++.|. .......+|+.+ .+.-|.|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~ 261 (265)
T PRK07097 213 DQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGILAYI 261 (265)
T ss_pred HHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCceecc
Confidence 1111111 123557888876 333456677754 466677665
No 46
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.98 E-value=1.1e-30 Score=223.65 Aligned_cols=225 Identities=19% Similarity=0.164 Sum_probs=173.3
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++||+++ ||||+ +|||+++ +.+|++.|+.|+. ++.++.++...++... +.++..+++|+++.+++
T Consensus 2 ~~~k~~l-ItGas------~gIG~~i---a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 69 (252)
T PRK12747 2 LKGKVAL-VTGAS------RGIGRAI---AKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGV 69 (252)
T ss_pred CCCCEEE-EeCCC------ChHHHHH---HHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHH
Confidence 4689999 99999 9999999 6667778877753 5667777777777654 45678899999999999
Q ss_pred HHHHHHHHHh----CC--CccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcC
Q psy4251 100 KKFAEEYQKK----FR--SLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSS 171 (292)
Q Consensus 100 ~~~~~~~~~~----~~--~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS 171 (292)
..+++++.+. ++ ++|+||||||+.. +..+.+.++|++++++|+.++++++++++|.|.+ . ++||++||
T Consensus 70 ~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~--g~iv~isS 145 (252)
T PRK12747 70 EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--N--SRIINISS 145 (252)
T ss_pred HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--C--CeEEEECC
Confidence 9999888753 33 8999999999753 3456678889999999999999999999999964 3 89999999
Q ss_pred cccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCcc
Q psy4251 172 ESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPV 250 (292)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~ 250 (292)
..+..+. + +...|++||+++.+++++++.++.++||+||+|+||+|. ++.++........
T Consensus 146 ~~~~~~~------------~-------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~ 206 (252)
T PRK12747 146 AATRISL------------P-------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMK 206 (252)
T ss_pred cccccCC------------C-------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHH
Confidence 9877654 2 567899999999999999999999999999999999999 8865432211111
Q ss_pred chhhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 251 RTFSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.+.... .....+.+|++.|. ++.....+|+.+
T Consensus 207 ~~~~~~-~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i 244 (252)
T PRK12747 207 QYATTI-SAFNRLGEVEDIADTAAFLASPDSRWVTGQLI 244 (252)
T ss_pred HHHHhc-CcccCCCCHHHHHHHHHHHcCccccCcCCcEE
Confidence 111110 01122468888887 444555677654
No 47
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.98 E-value=1.5e-30 Score=224.02 Aligned_cols=228 Identities=12% Similarity=0.061 Sum_probs=180.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcc-cchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYT-GLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~-GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
..++||+++ ||||+ + |||+++ +..++++|+.|+ .|+.+++++..+++++..+..++.++++|+++++
T Consensus 13 ~~~~~k~vl-ItG~s------g~gIG~~i---a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 82 (262)
T PRK07831 13 GLLAGKVVL-VTAAA------GTGIGSAT---ARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA 82 (262)
T ss_pred cccCCCEEE-EECCC------cccHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH
Confidence 456789999 99997 6 999999 555667777766 4778888888888876544457889999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESH 174 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~ 174 (292)
+++++++++.+.++++|+||||||... +..+.+.++|++.+++|+.+++.+++.++|.|..+. . ++||+++|..+
T Consensus 83 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--g~iv~~ss~~~ 160 (262)
T PRK07831 83 QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHG--GVIVNNASVLG 160 (262)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--cEEEEeCchhh
Confidence 999999999999999999999999753 456677889999999999999999999999998765 5 89999999876
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchh
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTF 253 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~ 253 (292)
..+. + +...|+++|+++++++++++.++.++||+||+|+||+++ ++.+..... ...
T Consensus 161 ~~~~------------~-------~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~----~~~ 217 (262)
T PRK07831 161 WRAQ------------H-------GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSA----ELL 217 (262)
T ss_pred cCCC------------C-------CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCH----HHH
Confidence 6543 2 567899999999999999999999999999999999999 876543111 111
Q ss_pred hhhhccc--cccCCHHHhhc------ccccCCCCCccc
Q psy4251 254 SWISRVR--PVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 254 ~~~~~~~--~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
..+.... ....+|++.|. ++.....+|+.+
T Consensus 218 ~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i 255 (262)
T PRK07831 218 DELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVV 255 (262)
T ss_pred HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceE
Confidence 1111111 12457888887 455566788755
No 48
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.98 E-value=1.4e-30 Score=223.18 Aligned_cols=226 Identities=15% Similarity=0.161 Sum_probs=180.2
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +.+|++.|+.|+. |+.+++++..+++... +.++..+++|++|.++
T Consensus 5 ~~l~~k~~l-ItGas------~giG~~i---a~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~ 72 (254)
T PRK08085 5 FSLAGKNIL-ITGSA------QGIGFLL---ATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQE 72 (254)
T ss_pred ccCCCCEEE-EECCC------ChHHHHH---HHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHH
Confidence 357899999 99999 9999999 5556677877764 8888888888888765 4578889999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.++++++|+||||||... +..+.+.++|++.+++|+.+++.+++++++.+.+++. ++||++||..+..
T Consensus 73 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~isS~~~~~ 150 (254)
T PRK08085 73 VEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQA--GKIINICSMQSEL 150 (254)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--cEEEEEccchhcc
Confidence 99999999999999999999999863 4566788999999999999999999999999977666 8999999987665
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
+. + +...|+++|++++.+++++++++.++||++|+|+||+++ ++.+..... ..+..+
T Consensus 151 ~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~---~~~~~~ 208 (254)
T PRK08085 151 GR------------D-------TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED---EAFTAW 208 (254)
T ss_pred CC------------C-------CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC---HHHHHH
Confidence 43 2 567899999999999999999999999999999999999 876653211 111122
Q ss_pred hhccc--cccCCHHHhhc------ccccCCCCCcc
Q psy4251 256 ISRVR--PVTNFQVDLTG------TAEKVGLSGLP 282 (292)
Q Consensus 256 ~~~~~--~~~~~~~~~a~------~~~~~~~~G~~ 282 (292)
..... ....+|++.+. .+.....+|+.
T Consensus 209 ~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~ 243 (254)
T PRK08085 209 LCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHL 243 (254)
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCE
Confidence 11111 22457888876 44455556653
No 49
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.98 E-value=1.5e-30 Score=230.63 Aligned_cols=249 Identities=22% Similarity=0.204 Sum_probs=179.1
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++|+++ ||||+ +|||+++ +.+|+.+|+.|+ +|+.++++++.+++... +.++.++++|++|.+++
T Consensus 3 ~~~~k~vl-VTGas------~gIG~~~---a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v 70 (322)
T PRK07453 3 QDAKGTVI-ITGAS------SGVGLYA---AKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSV 70 (322)
T ss_pred CCCCCEEE-EEcCC------ChHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHH
Confidence 45688999 99999 9999999 555667777665 58888888888887532 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccCC---CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFGL---GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+++++++.+.+++||+||||||+..+ ..+.+.++++.++++|++|+++++++++|.|++++...+|||++||..+..
T Consensus 71 ~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 71 RRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred HHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 99999988877899999999998643 245688899999999999999999999999987652115999999987654
Q ss_pred ccCC-----CCCCCccccCc-----------CCCCCChhhhHHHHhHHHHHHHHHHHHhHhc-CCCeEEEEecCCcc-c-
Q psy4251 177 SYIT-----KDTISKSVLSV-----------ENYSDFWAMTAYNDTKLCNVLFGEKLATLWY-KYKIALSSRHCCWK-I- 237 (292)
Q Consensus 177 ~~~~-----~~~~~~~~~~~-----------~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~PG~v-~- 237 (292)
.... ....+++++.. .....+.+...|+.||+++.++++.+++++. ..||++++|+||+| .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 151 KELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred cccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 2110 00112221110 0123456778999999999999999999995 45899999999999 4
Q ss_pred cccccccccCCccchhhhhhc-cccccCCHHHhhc-------ccccCCCCCccccC
Q psy4251 238 TVSKKWWRFGTPVRTFSWISR-VRPVTNFQVDLTG-------TAEKVGLSGLPDSE 285 (292)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~-------~~~~~~~~G~~~~~ 285 (292)
++.++... ....+..++.+ ......+++++++ .+.. ..+|.||.+
T Consensus 231 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~y~~~ 283 (322)
T PRK07453 231 PLFRNTPP--LFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEF-AQSGVHWSW 283 (322)
T ss_pred cccccCCH--HHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCccc-CCCCceeec
Confidence 77665321 01111111100 1112356666653 3333 468999973
No 50
>PRK09242 tropinone reductase; Provisional
Probab=99.97 E-value=1.8e-30 Score=222.93 Aligned_cols=236 Identities=16% Similarity=0.124 Sum_probs=186.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +..+++.|+.|+ .|+.+.+++..+++....++.++.++++|+++.++
T Consensus 5 ~~~~~k~~l-ItGa~------~gIG~~~---a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~ 74 (257)
T PRK09242 5 WRLDGQTAL-ITGAS------KGIGLAI---AREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDED 74 (257)
T ss_pred cccCCCEEE-EeCCC------chHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHH
Confidence 467899999 99999 9999999 555667777765 58888888888888777666789999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+.++++|+||||||... +..+.+.+++++.+.+|+.+++.++++++|+|.+++. ++||++||..+..
T Consensus 75 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~ii~~sS~~~~~ 152 (257)
T PRK09242 75 RRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHAS--SAIVNIGSVSGLT 152 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--ceEEEECccccCC
Confidence 99999999999999999999999853 4566788999999999999999999999999988776 8999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
+. + +...|+++|.++..++++++.++.+.||++|+|+||+++ ++.+..... ..+...
T Consensus 153 ~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~---~~~~~~ 210 (257)
T PRK09242 153 HV------------R-------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD---PDYYEQ 210 (257)
T ss_pred CC------------C-------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC---hHHHHH
Confidence 43 2 567899999999999999999999889999999999999 876643221 111111
Q ss_pred hhc--cccccCCHHHhhc------ccccCCCCCccc--cCCcccc
Q psy4251 256 ISR--VRPVTNFQVDLTG------TAEKVGLSGLPD--SEWMWHY 290 (292)
Q Consensus 256 ~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~--~~~~w~~ 290 (292)
... ......++++.+. ++.....+|+.+ ..+.+.|
T Consensus 211 ~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~~~ 255 (257)
T PRK09242 211 VIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGGFLRY 255 (257)
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCeEee
Confidence 111 1123457887776 333344567754 3344444
No 51
>PLN00015 protochlorophyllide reductase
Probab=99.97 E-value=9.6e-31 Score=230.40 Aligned_cols=240 Identities=23% Similarity=0.265 Sum_probs=173.6
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcC-cEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSS-KLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEY 106 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g-~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~ 106 (292)
|||||+ +|||+++ +.+|+++| +.|+ .|+.++++++.+++... +.++.++++|++|.++++++++++
T Consensus 1 lITGas------~GIG~ai---a~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~ 69 (308)
T PLN00015 1 IITGAS------SGLGLAT---AKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNF 69 (308)
T ss_pred CEeCCC------ChHHHHH---HHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHH
Confidence 499999 9999999 55566677 6655 48888888877777432 457888999999999999999999
Q ss_pred HHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC--CCCcEEEEEcCcccccccCC-
Q psy4251 107 QKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA--KLFARVVVVSSESHRYSYIT- 180 (292)
Q Consensus 107 ~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~--~~~~~iV~vsS~~~~~~~~~- 180 (292)
.+.+++||+||||||+.. +..+.+.++|+.++++|+.|++++++.++|.|.+++ . ++||++||..+..+...
T Consensus 70 ~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~--g~IV~vsS~~~~~~~~~~ 147 (308)
T PLN00015 70 RRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPS--KRLIIVGSITGNTNTLAG 147 (308)
T ss_pred HhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCC--CEEEEEeccccccccccc
Confidence 988889999999999863 345678899999999999999999999999998765 5 89999999876532110
Q ss_pred --CCCCCccccC-------------cCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC-CCeEEEEecCCcc-c-ccccc
Q psy4251 181 --KDTISKSVLS-------------VENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK-YKIALSSRHCCWK-I-TVSKK 242 (292)
Q Consensus 181 --~~~~~~~~~~-------------~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~gi~v~~v~PG~v-~-~~~~~ 242 (292)
....+++++. ......+.+..+|++||+|+.++++.+++++.. .||+|++|+||+| . +|.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~ 227 (308)
T PLN00015 148 NVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE 227 (308)
T ss_pred cCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence 0001111110 000123457789999999999999999999965 6999999999999 6 77654
Q ss_pred ccccCCccchhhhhhc-cccccCCHHHhhc------ccccCCCCCcccc
Q psy4251 243 WWRFGTPVRTFSWISR-VRPVTNFQVDLTG------TAEKVGLSGLPDS 284 (292)
Q Consensus 243 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~------~~~~~~~~G~~~~ 284 (292)
.... .......+.. ......+|+++|. .......+|.||.
T Consensus 228 ~~~~--~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~ 274 (308)
T PLN00015 228 HIPL--FRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWS 274 (308)
T ss_pred ccHH--HHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccc
Confidence 2110 0111000000 1112468898887 2233456899885
No 52
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.97 E-value=2e-30 Score=222.35 Aligned_cols=228 Identities=18% Similarity=0.158 Sum_probs=179.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
..+++|+++ ||||+ +|||+++ +..|.++|+.|+ .|+.+..++..+++.+. +.++.++++|+++.++
T Consensus 7 ~~l~~k~vl-VtG~s------~gIG~~l---a~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~ 74 (255)
T PRK06113 7 LRLDGKCAI-ITGAG------AGIGKEI---AITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQE 74 (255)
T ss_pred cCcCCCEEE-EECCC------chHHHHH---HHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHH
Confidence 357899999 99999 9999999 555667777665 47888888888877654 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC-CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG-LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
+.++++.+.+.++++|++|||||... ...+.+.++++..+++|+.+++.++++++|.|.+.+. ++||++||..+..+
T Consensus 75 i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~isS~~~~~~ 152 (255)
T PRK06113 75 LSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG--GVILTITSMAAENK 152 (255)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC--cEEEEEecccccCC
Confidence 99999999999999999999999864 2345678899999999999999999999999987666 89999999877654
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhh
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWI 256 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~ 256 (292)
. + +...|+++|+++++++++++.++.+.||+||+|+||+++ ++.+...............
T Consensus 153 ~------------~-------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~ 213 (255)
T PRK06113 153 N------------I-------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT 213 (255)
T ss_pred C------------C-------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcC
Confidence 4 2 567899999999999999999999999999999999999 8765431110111111111
Q ss_pred hccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 257 SRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 257 ~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
......+|++.+. .+.....+|+.+
T Consensus 214 --~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i 244 (255)
T PRK06113 214 --PIRRLGQPQDIANAALFLCSPAASWVSGQIL 244 (255)
T ss_pred --CCCCCcCHHHHHHHHHHHcCccccCccCCEE
Confidence 1123468888887 444455567654
No 53
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.97 E-value=2e-30 Score=221.88 Aligned_cols=227 Identities=14% Similarity=0.125 Sum_probs=180.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++++|+++ ||||+ +|||+++ +.+|.+.|..|+ .|+.+++++..+++.+. +.++.++++|+++.++
T Consensus 4 ~~l~~k~vl-ItGas------~gIG~~l---~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~ 71 (252)
T PRK07035 4 FDLTGKIAL-VTGAS------RGIGEAI---AKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQ 71 (252)
T ss_pred cccCCCEEE-EECCC------cHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHH
Confidence 468899999 99999 9999999 555556676665 48888888888888655 4578889999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEccccc---CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVF---GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
++++++++.+.++++|++|||||.. .+..+.+.++++..+++|+.+++.++++++|++.++.. ++||++||..+.
T Consensus 72 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~ 149 (252)
T PRK07035 72 IDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGG--GSIVNVASVNGV 149 (252)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--cEEEEECchhhc
Confidence 9999999999999999999999974 34456788889999999999999999999999987666 899999998776
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
.+. + +...|++||++++.+++++++++.++||+|++|+||.|+ ++.+...... ....
T Consensus 150 ~~~------------~-------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~---~~~~ 207 (252)
T PRK07035 150 SPG------------D-------FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKND---AILK 207 (252)
T ss_pred CCC------------C-------CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCH---HHHH
Confidence 543 2 567899999999999999999999999999999999999 8766532210 1111
Q ss_pred hhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
...+ ......+|++.|+ .......+|+.+
T Consensus 208 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~ 244 (252)
T PRK07035 208 QALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECL 244 (252)
T ss_pred HHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEE
Confidence 1111 1122568888887 344455677654
No 54
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.97 E-value=3.2e-30 Score=223.82 Aligned_cols=230 Identities=18% Similarity=0.179 Sum_probs=180.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++++|+++ ||||+ +|||+++ +.+|++.|+.|+ .|+.+.+++..+++.+. +.++.++++|++++++
T Consensus 6 ~~~~~k~vl-VtGas------~giG~~i---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~ 73 (278)
T PRK08277 6 FSLKGKVAV-ITGGG------GVLGGAM---AKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKES 73 (278)
T ss_pred eccCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHH
Confidence 357899999 99999 9999999 555667777765 48888888888887654 4578999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCC-----------------CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGL-----------------GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK 161 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~-----------------~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~ 161 (292)
+.++++++.++++++|++|||||...+ ..+.+.++|+..+++|+.+++.++++++|.|.+++.
T Consensus 74 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 153 (278)
T PRK08277 74 LEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKG 153 (278)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999996532 345667889999999999999999999999987766
Q ss_pred CCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 162 LFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 162 ~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
++||++||..+..+. + +...|++||++++.++++++.++.+.||+||+|+||+|. ++.
T Consensus 154 --g~ii~isS~~~~~~~------------~-------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~ 212 (278)
T PRK08277 154 --GNIINISSMNAFTPL------------T-------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQN 212 (278)
T ss_pred --cEEEEEccchhcCCC------------C-------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcch
Confidence 999999999877654 2 567899999999999999999999999999999999999 876
Q ss_pred cccccc--CCccchhhhhhc--cccccCCHHHhhc------cc-ccCCCCCccc
Q psy4251 241 KKWWRF--GTPVRTFSWISR--VRPVTNFQVDLTG------TA-EKVGLSGLPD 283 (292)
Q Consensus 241 ~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~a~------~~-~~~~~~G~~~ 283 (292)
+..... +........+.. ......+|++.|. ++ .....+|+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i 266 (278)
T PRK08277 213 RALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVL 266 (278)
T ss_pred hhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEE
Confidence 543211 110111111101 1122457888886 44 4566777654
No 55
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.97 E-value=2.3e-30 Score=222.34 Aligned_cols=227 Identities=17% Similarity=0.160 Sum_probs=176.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +..|++.|+.|+ .|+ ++.++..+.+.+. +.++.++++|+++.++
T Consensus 11 ~~l~~k~vl-ItGas------~gIG~~i---a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~ 77 (258)
T PRK06935 11 FSLDGKVAI-VTGGN------TGLGQGY---AVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPES 77 (258)
T ss_pred ccCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence 457899999 99999 9999999 555667787765 466 5555665555443 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+.++++|++|||||... +..+.+.++|+..+++|+.+++.++++++|.|.++.. ++||++||..+..
T Consensus 78 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~ 155 (258)
T PRK06935 78 AEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGS--GKIINIASMLSFQ 155 (258)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCC--eEEEEECCHHhcc
Confidence 99999999999999999999999863 4456678899999999999999999999999987766 8999999988765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCc-cchhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTP-VRTFS 254 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~-~~~~~ 254 (292)
+. + ....|+++|++++.+++++++++.++||+||+|+||+++ ++.+........ .....
T Consensus 156 ~~------------~-------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~ 216 (258)
T PRK06935 156 GG------------K-------FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILK 216 (258)
T ss_pred CC------------C-------CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHh
Confidence 54 2 567899999999999999999999999999999999999 876543211000 01111
Q ss_pred hhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.. ...-..+|++.+. ++.....+|+.+
T Consensus 217 ~~--~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i 249 (258)
T PRK06935 217 RI--PAGRWGEPDDLMGAAVFLASRASDYVNGHIL 249 (258)
T ss_pred cC--CCCCCCCHHHHHHHHHHHcChhhcCCCCCEE
Confidence 11 1123567787776 444455566643
No 56
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.97 E-value=3.6e-30 Score=221.59 Aligned_cols=224 Identities=14% Similarity=0.096 Sum_probs=174.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++|+++ ||||+ +|||+++ +.+|++.|+.|+ .|+.+++++..+++ +.++.++++|++|.+++
T Consensus 3 ~~~~k~vl-ItGas------~gIG~~i---a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~ 67 (261)
T PRK08265 3 GLAGKVAI-VTGGA------TLIGAAV---ARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAI 67 (261)
T ss_pred CCCCCEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHH
Confidence 57789999 99999 9999999 666677887776 48877777666554 34788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC-CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG-LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
.++++++.++++++|+||||||... ...+.+.++|++.+++|+.+++.++++++|.|. ++. ++||++||.++..+.
T Consensus 68 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--g~ii~isS~~~~~~~ 144 (261)
T PRK08265 68 ERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGG--GAIVNFTSISAKFAQ 144 (261)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCC--cEEEEECchhhccCC
Confidence 9999999999999999999999863 234567889999999999999999999999997 445 899999998877654
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCc--cchhhh
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTP--VRTFSW 255 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~--~~~~~~ 255 (292)
+ ....|+++|+++..++++++.++.+.||+||+|+||+++ ++.+........ ..+...
T Consensus 145 ------------~-------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~ 205 (261)
T PRK08265 145 ------------T-------GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP 205 (261)
T ss_pred ------------C-------CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc
Confidence 2 567899999999999999999999999999999999999 876543211000 011100
Q ss_pred hhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 256 ISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 256 ~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
. .....+.+|++.|. ++.....+|+.+
T Consensus 206 ~-~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i 238 (261)
T PRK08265 206 F-HLLGRVGDPEEVAQVVAFLCSDAASFVTGADY 238 (261)
T ss_pred c-CCCCCccCHHHHHHHHHHHcCccccCccCcEE
Confidence 0 01112457888887 444456677643
No 57
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=1e-30 Score=206.68 Aligned_cols=182 Identities=19% Similarity=0.154 Sum_probs=158.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.++|-|++ ||||+ +|||+++|+.+.++ +..++|.+|++++++++.++. ..+....||+.|.+++++
T Consensus 2 k~tgnTiL-ITGG~------sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~ 67 (245)
T COG3967 2 KTTGNTIL-ITGGA------SGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRE 67 (245)
T ss_pred cccCcEEE-EeCCc------chhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhHHH
Confidence 46788999 99999 99999996665555 333455569999988877653 367888999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccCCC----CCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLG----FSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
++++++++++.+++||||||++... .+...++.++.+.+|++++..++..++|++.+++. +.||+|||..+..+
T Consensus 68 lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~--a~IInVSSGLafvP 145 (245)
T COG3967 68 LVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPE--ATIINVSSGLAFVP 145 (245)
T ss_pred HHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCC--ceEEEeccccccCc
Confidence 9999999999999999999998531 23456678899999999999999999999999887 99999999998887
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-c
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-T 238 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~ 238 (292)
.. ..+.||++|+|++.++.+|..+++..+|.|.-+.|-.|+ +
T Consensus 146 m~-------------------~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 146 MA-------------------STPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred cc-------------------ccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 62 577999999999999999999999999999999999999 5
No 58
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.97 E-value=4.7e-30 Score=219.72 Aligned_cols=228 Identities=14% Similarity=0.126 Sum_probs=181.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||.++ +.+|++.|..|+ .|+.+++++..+++.+. +.++.++++|+++.++
T Consensus 3 ~~l~~k~il-ItGas------~~iG~~i---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~ 70 (253)
T PRK06172 3 MTFSGKVAL-VTGGA------AGIGRAT---ALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAE 70 (253)
T ss_pred cCCCCCEEE-EeCCC------chHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence 357899999 99999 9999999 555566676665 48888888888877655 5678999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+.++++++.+.++++|++|||||... +..+.+.+++++++++|+.+++.++++++|.+.++.. ++||++||..+.
T Consensus 71 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~ii~~sS~~~~ 148 (253)
T PRK06172 71 VKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGG--GAIVNTASVAGL 148 (253)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEECchhhc
Confidence 99999999999999999999999853 2456788999999999999999999999999987766 899999998777
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
.+. + +...|+.+|++++.|+++++.++.++||+|++|+||.|+ ++.+..... ......
T Consensus 149 ~~~------------~-------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~--~~~~~~ 207 (253)
T PRK06172 149 GAA------------P-------KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA--DPRKAE 207 (253)
T ss_pred cCC------------C-------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc--ChHHHH
Confidence 654 2 677899999999999999999999999999999999999 887654221 111111
Q ss_pred hhhcccc--ccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISRVRP--VTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~~~~--~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.+....+ -+.+|++.+. .+.....+|+.+
T Consensus 208 ~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i 244 (253)
T PRK06172 208 FAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHAL 244 (253)
T ss_pred HHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEE
Confidence 1111111 2458888887 333456677754
No 59
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.97 E-value=8.4e-30 Score=222.80 Aligned_cols=195 Identities=15% Similarity=0.146 Sum_probs=162.8
Q ss_pred CCCCCCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccC
Q psy4251 16 LLHPASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDL 93 (292)
Q Consensus 16 ~~~~~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl 93 (292)
.+.+..+++|++++ ||||+ +|||+++ +..|++.|+.|+ .|+.+++++..+++... +.++.++++|+
T Consensus 31 ~~~~~~~~~~k~vl-ItGas------ggIG~~l---a~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl 98 (293)
T PRK05866 31 PPRQPVDLTGKRIL-LTGAS------SGIGEAA---AEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDL 98 (293)
T ss_pred CCCCCcCCCCCEEE-EeCCC------cHHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccC
Confidence 34456778899998 99999 9999999 555666777765 58888888888888654 45788999999
Q ss_pred CChHHHHHHHHHHHHhCCCccEEEEcccccCC--CCCC--CCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEE
Q psy4251 94 CRLKSVKKFAEEYQKKFRSLNILVLNAGVFGL--GFSH--TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVV 169 (292)
Q Consensus 94 s~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~--~~~~--~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~v 169 (292)
+|.+++.++++++.+.++++|++|||||.... ..+. +.++++.++++|+.|++.++++++|.|.+.+. ++||++
T Consensus 99 ~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--g~iv~i 176 (293)
T PRK05866 99 SDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGD--GHIINV 176 (293)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--cEEEEE
Confidence 99999999999999999999999999998632 2221 34678899999999999999999999988777 999999
Q ss_pred cCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 170 SSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 170 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
||.++..... + ....|++||+++.+|+++++.|+.++||+|++|+||+|+ ++.+.
T Consensus 177 sS~~~~~~~~-----------p-------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~ 232 (293)
T PRK05866 177 ATWGVLSEAS-----------P-------LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP 232 (293)
T ss_pred CChhhcCCCC-----------C-------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc
Confidence 9975443211 2 567899999999999999999999999999999999999 88754
No 60
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.97 E-value=3.2e-30 Score=220.06 Aligned_cols=225 Identities=16% Similarity=0.212 Sum_probs=173.6
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||.++ +.+|+++|+.|+. |+. ..+..+.+.+. +.++.++++|+++.+++
T Consensus 2 ~~~~k~vl-ItGas------~gIG~~i---a~~l~~~G~~vi~~~r~~--~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 67 (248)
T TIGR01832 2 SLEGKVAL-VTGAN------TGLGQGI---AVGLAEAGADIVGAGRSE--PSETQQQVEAL--GRRFLSLTADLSDIEAI 67 (248)
T ss_pred CCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEcCch--HHHHHHHHHhc--CCceEEEECCCCCHHHH
Confidence 47899999 99999 9999999 6667778888775 543 34445555443 45789999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~ 176 (292)
..+++++.+.++++|++|||||... +..+.+.++|++.+++|+.+++.++++++|.|.++. . ++||++||..+..
T Consensus 68 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~~ 145 (248)
T TIGR01832 68 KALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRG--GKIINIASMLSFQ 145 (248)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC--eEEEEEecHHhcc
Confidence 9999999998899999999999864 345667789999999999999999999999997654 5 8999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC-ccchhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT-PVRTFS 254 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~-~~~~~~ 254 (292)
+. + ....|+.+|+++..+++++++++.++||+||+|+||++. ++.+....... ...+..
T Consensus 146 ~~------------~-------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 206 (248)
T TIGR01832 146 GG------------I-------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILE 206 (248)
T ss_pred CC------------C-------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHh
Confidence 43 2 456899999999999999999999999999999999999 87654311100 001111
Q ss_pred hhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.. ......+|++.|+ ++.....+|+++
T Consensus 207 ~~--~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i 239 (248)
T TIGR01832 207 RI--PAGRWGTPDDIGGPAVFLASSASDYVNGYTL 239 (248)
T ss_pred cC--CCCCCcCHHHHHHHHHHHcCccccCcCCcEE
Confidence 11 1123567888887 344455677754
No 61
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.97 E-value=5.1e-30 Score=219.86 Aligned_cols=226 Identities=17% Similarity=0.179 Sum_probs=169.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +..|++.|+.|+. ++.+. ..+++.+. .+.++++|++|+++
T Consensus 3 ~~l~~k~~l-ItGas------~gIG~~~---a~~l~~~G~~v~~~~~~~~~---~~~~l~~~----~~~~~~~Dl~~~~~ 65 (255)
T PRK06463 3 MRFKGKVAL-ITGGT------RGIGRAI---AEAFLREGAKVAVLYNSAEN---EAKELREK----GVFTIKCDVGNRDQ 65 (255)
T ss_pred CCcCCCEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEEeCCcHH---HHHHHHhC----CCeEEEecCCCHHH
Confidence 356789999 99999 9999999 6666778877763 33322 22333322 47789999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.++++++|+||||||+.. +..+.+.++|++.+++|+.+++.+++.++|.|.++.. ++||++||..+..
T Consensus 66 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--g~iv~isS~~~~~ 143 (255)
T PRK06463 66 VKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKN--GAIVNIASNAGIG 143 (255)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--cEEEEEcCHHhCC
Confidence 99999999999999999999999863 4556788899999999999999999999999987666 8999999987653
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
... + +...|++||+++.+|+++++.++.+.||+||+|+||+++ ++................
T Consensus 144 ~~~-----------~-------~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~ 205 (255)
T PRK06463 144 TAA-----------E-------GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLREL 205 (255)
T ss_pred CCC-----------C-------CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHH
Confidence 221 2 457899999999999999999999999999999999999 876542111100111111
Q ss_pred hhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 256 ISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 256 ~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
... ......+|++.|+ ++.....+|+.+
T Consensus 206 ~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~ 241 (255)
T PRK06463 206 FRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVI 241 (255)
T ss_pred HHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEE
Confidence 111 1122468888887 333445667654
No 62
>PRK07985 oxidoreductase; Provisional
Probab=99.97 E-value=4.2e-30 Score=224.86 Aligned_cols=224 Identities=17% Similarity=0.111 Sum_probs=172.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC--HHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC--WDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
+++||+++ ||||+ +|||+++ +..|++.|+.|+. |+ .+..+++.+.+.+. +.++.++++|++|.+
T Consensus 46 ~~~~k~vl-ITGas------~gIG~ai---a~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~ 113 (294)
T PRK07985 46 RLKDRKAL-VTGGD------SGIGRAA---AIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEK 113 (294)
T ss_pred ccCCCEEE-EECCC------CcHHHHH---HHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHH
Confidence 47889999 99999 9999999 6667778888775 32 34455555555443 457888999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEccccc---CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVF---GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESH 174 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~ 174 (292)
++.++++++.+.++++|++|||||.. .+..+.+.++|++++++|+.+++.++++++|.|.+ . ++||++||..+
T Consensus 114 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~--g~iv~iSS~~~ 189 (294)
T PRK07985 114 FARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--G--ASIITTSSIQA 189 (294)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--C--CEEEEECCchh
Confidence 99999999999999999999999974 24567788999999999999999999999999964 3 89999999877
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchh
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTF 253 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~ 253 (292)
..+. + ....|+++|+++.+++++++.++.++||+||+|+||+|. ++...... .....
T Consensus 190 ~~~~------------~-------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~---~~~~~ 247 (294)
T PRK07985 190 YQPS------------P-------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ---TQDKI 247 (294)
T ss_pred ccCC------------C-------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC---CHHHH
Confidence 6553 2 567899999999999999999999999999999999999 87532110 11111
Q ss_pred hhhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 254 SWISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 254 ~~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
..+.. ......+|++.|. ++.....+|+.+
T Consensus 248 ~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i 285 (294)
T PRK07985 248 PQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVH 285 (294)
T ss_pred HHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccEE
Confidence 11111 1122568888887 444555666643
No 63
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.97 E-value=5.1e-30 Score=220.36 Aligned_cols=223 Identities=14% Similarity=0.054 Sum_probs=173.6
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ +|||+++ +.+++++|+.|+ .|+.+++++..+++.+. .++.++++|++|.++++++++
T Consensus 2 ~vl-ItGas------~gIG~ai---a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~ 68 (259)
T PRK08340 2 NVL-VTASS------RGIGFNV---ARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVK 68 (259)
T ss_pred eEE-EEcCC------cHHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHH
Confidence 467 99999 9999999 555667777766 48888888888888653 368889999999999999999
Q ss_pred HHHHhCCCccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHh-cCCCCcEEEEEcCcccccccC
Q psy4251 105 EYQKKFRSLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIK-GAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~-~~~~~~~iV~vsS~~~~~~~~ 179 (292)
++.++++++|+||||||... +..+.+.++|.+.+.+|+.+++.+++.++|.|.+ +.. ++||++||..+..+.
T Consensus 69 ~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~--g~iv~isS~~~~~~~- 145 (259)
T PRK08340 69 EAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMK--GVLVYLSSVSVKEPM- 145 (259)
T ss_pred HHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCC--CEEEEEeCcccCCCC-
Confidence 99999999999999999752 2456677889999999999999999999998863 445 899999998776543
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccc-------cCCccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWR-------FGTPVR 251 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~-------~~~~~~ 251 (292)
+ +...|+++|+++..++++++.++.++||+||+|+||+++ ++.+.... ......
T Consensus 146 -----------~-------~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~ 207 (259)
T PRK08340 146 -----------P-------PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEET 207 (259)
T ss_pred -----------C-------CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHH
Confidence 2 567899999999999999999999999999999999999 87653211 000000
Q ss_pred hhhhh-hc-cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 252 TFSWI-SR-VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 252 ~~~~~-~~-~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
....+ .+ ....+.+|+|.|. ++.....+|+..
T Consensus 208 ~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i 247 (259)
T PRK08340 208 WEREVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTI 247 (259)
T ss_pred HHHHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceE
Confidence 00111 11 1123568898887 555667778743
No 64
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.97 E-value=6.9e-30 Score=219.22 Aligned_cols=230 Identities=13% Similarity=0.039 Sum_probs=171.3
Q ss_pred EEEcCCCCCCCCcccchhhHHHHHHHH-hhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHH
Q psy4251 29 ILCTGDMEFYPRYTGLKKKDGNLCFDL-VQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 29 vlItGa~~~~~~~~GiG~~~a~~~~~l-~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
+|||||+ +|||+++|+.+.+. ...|..|+ .|+.++++++.+++....++.++.++++|+++.+++++++++
T Consensus 3 vlItGas------~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~ 76 (256)
T TIGR01500 3 CLVTGAS------RGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKA 76 (256)
T ss_pred EEEecCC------CchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHH
Confidence 3499999 99999996655432 12576655 589999999988887654456889999999999999999999
Q ss_pred HHHhCCCc----cEEEEcccccCC----CCCC-CCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 106 YQKKFRSL----NILVLNAGVFGL----GFSH-TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 106 ~~~~~~~i----d~lI~nAg~~~~----~~~~-~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.+.++++ |+||||||.... ..+. +.++|++.+++|+.+++.+++.++|.|.++....++||++||..+..
T Consensus 77 ~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~ 156 (256)
T TIGR01500 77 LRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ 156 (256)
T ss_pred HHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC
Confidence 98877643 699999998532 1222 45789999999999999999999999986531117999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
+. + +...|++||+++..|+++++.++.+.||+||+|+||+|+ ++.+..............
T Consensus 157 ~~------------~-------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~ 217 (256)
T TIGR01500 157 PF------------K-------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKG 217 (256)
T ss_pred CC------------C-------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHH
Confidence 54 2 677899999999999999999999999999999999999 887643211000011111
Q ss_pred hh--ccccccCCHHHhhc-----ccccCCCCCccc
Q psy4251 256 IS--RVRPVTNFQVDLTG-----TAEKVGLSGLPD 283 (292)
Q Consensus 256 ~~--~~~~~~~~~~~~a~-----~~~~~~~~G~~~ 283 (292)
+. .....+.+|++.|. .......+|+.+
T Consensus 218 ~~~~~~~~~~~~p~eva~~~~~l~~~~~~~~G~~~ 252 (256)
T TIGR01500 218 LQELKAKGKLVDPKVSAQKLLSLLEKDKFKSGAHV 252 (256)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHhcCCcCCccee
Confidence 10 01223568999887 334456677743
No 65
>PRK08643 acetoin reductase; Validated
Probab=99.97 E-value=7.3e-30 Score=218.89 Aligned_cols=232 Identities=16% Similarity=0.098 Sum_probs=179.8
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
||+++ ||||+ +|||.++ +..|++.|+.|+ .|+.+++++..+++.+. +.++.++++|++++++++++
T Consensus 2 ~k~~l-ItGas------~giG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~ 69 (256)
T PRK08643 2 SKVAL-VTGAG------QGIGFAI---AKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAA 69 (256)
T ss_pred CCEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHH
Confidence 67888 99999 9999999 555667777765 48888888888888654 45788999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccccccC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~~~ 179 (292)
++++.+++++||++|||||+.. +..+.+.++++..+++|+.+++.+++.+++.|.+.+ . ++||++||..+..+.
T Consensus 70 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~- 146 (256)
T PRK08643 70 VRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHG--GKIINATSQAGVVGN- 146 (256)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--CEEEEECccccccCC-
Confidence 9999999999999999999863 456677889999999999999999999999997653 4 799999998776554
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccccccc-----CCccch-
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRF-----GTPVRT- 252 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~-----~~~~~~- 252 (292)
+ +...|+++|++++.++++++.++.++||+||+|+||+++ ++....... +.+..+
T Consensus 147 -----------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~ 208 (256)
T PRK08643 147 -----------P-------ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWG 208 (256)
T ss_pred -----------C-------CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHH
Confidence 2 567899999999999999999999999999999999999 876543210 011111
Q ss_pred hhhh-hc-cccccCCHHHhhc------ccccCCCCCccc-cCCccc
Q psy4251 253 FSWI-SR-VRPVTNFQVDLTG------TAEKVGLSGLPD-SEWMWH 289 (292)
Q Consensus 253 ~~~~-~~-~~~~~~~~~~~a~------~~~~~~~~G~~~-~~~~w~ 289 (292)
.... .. ....+.++++.|. ++.....+|+.+ .|.-|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~~ 254 (256)
T PRK08643 209 MEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGMV 254 (256)
T ss_pred HHHHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCee
Confidence 0111 00 1223457888877 455667788865 244343
No 66
>PRK06128 oxidoreductase; Provisional
Probab=99.97 E-value=4.2e-30 Score=225.58 Aligned_cols=185 Identities=21% Similarity=0.168 Sum_probs=157.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC--HHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC--WDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
.++||+++ ||||+ +|||+++ +..|++.|+.|+. ++ ....++..+.+.+. +.++.+++||+++.+
T Consensus 52 ~l~~k~vl-ITGas------~gIG~~~---a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~ 119 (300)
T PRK06128 52 RLQGRKAL-ITGAD------SGIGRAT---AIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEA 119 (300)
T ss_pred ccCCCEEE-EecCC------CcHHHHH---HHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHH
Confidence 47789999 99999 9999999 5556677877764 33 33455666666554 557889999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESH 174 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~ 174 (292)
+++++++++.+.++++|+||||||... +..+.+.++|+..+++|+.+++.++++++|.|.+ . ++||++||..+
T Consensus 120 ~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~--~~iv~~sS~~~ 195 (300)
T PRK06128 120 FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--G--ASIINTGSIQS 195 (300)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--C--CEEEEECCccc
Confidence 999999999999999999999999752 4567788999999999999999999999999864 3 89999999887
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
..+. + +...|++||++++.|++++++++.++||+||+|+||++. ++..
T Consensus 196 ~~~~------------~-------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~ 244 (300)
T PRK06128 196 YQPS------------P-------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQP 244 (300)
T ss_pred cCCC------------C-------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcc
Confidence 7554 2 567899999999999999999999999999999999999 8764
No 67
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.97 E-value=7.2e-30 Score=221.16 Aligned_cols=226 Identities=14% Similarity=0.056 Sum_probs=175.8
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHH-------HHHHHHHHHHhhCCCCceEEEEcc
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWD-------KANDAISKILTEKPSAQCIAMELD 92 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~D 92 (292)
+++||+++ ||||+ +|||.++ +..|++.|+.|+ .|+.+ ++++..+++... +.++.++++|
T Consensus 3 ~~~~k~vl-ItGas------~gIG~~i---a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D 70 (273)
T PRK08278 3 SLSGKTLF-ITGAS------RGIGLAI---ALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGD 70 (273)
T ss_pred CCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEec
Confidence 46789998 99999 9999999 555667777765 36543 245556666554 5578999999
Q ss_pred CCChHHHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEc
Q psy4251 93 LCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVS 170 (292)
Q Consensus 93 ls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vs 170 (292)
+++.+++.++++++.+.++++|+||||||... +..+.+.+++++.+++|+.+++.++++++|.|.++.. ++||++|
T Consensus 71 ~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~--g~iv~is 148 (273)
T PRK08278 71 VRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSEN--PHILTLS 148 (273)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCC--CEEEEEC
Confidence 99999999999999999999999999999853 4566788899999999999999999999999987766 8999999
Q ss_pred CcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCC-ccc-cccccccccCC
Q psy4251 171 SESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCC-WKI-TVSKKWWRFGT 248 (292)
Q Consensus 171 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG-~v~-~~~~~~~~~~~ 248 (292)
|..+..+. .+.+...|++||++++.+++++++++.++||+||+|+|| ++. ++.++.....
T Consensus 149 s~~~~~~~-----------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~- 210 (273)
T PRK08278 149 PPLNLDPK-----------------WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGD- 210 (273)
T ss_pred Cchhcccc-----------------ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccccc-
Confidence 87544321 012567899999999999999999999999999999999 577 6655432210
Q ss_pred ccchhhhhhccccccCCHHHhhc------ccccCCCCCccccCCcc
Q psy4251 249 PVRTFSWISRVRPVTNFQVDLTG------TAEKVGLSGLPDSEWMW 288 (292)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~~~~~w 288 (292)
. ......+|++.|+ .+.....+|+++.+..|
T Consensus 211 --~-------~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~~~ 247 (273)
T PRK08278 211 --E-------AMRRSRTPEIMADAAYEILSRPAREFTGNFLIDEEV 247 (273)
T ss_pred --c-------cccccCCHHHHHHHHHHHhcCccccceeEEEeccch
Confidence 0 1112468888887 34445678887765444
No 68
>KOG1611|consensus
Probab=99.97 E-value=7.4e-30 Score=204.95 Aligned_cols=214 Identities=18% Similarity=0.112 Sum_probs=164.6
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE---EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY---QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~---~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
++++ ||||+ +|||+.+++++.+ ..+..++ +|+.+++.+..+..... ..+++.+++|+++.++++++
T Consensus 4 ksv~-ItGaN------RGIGlgLVk~llk--~~~i~~iiat~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~ 72 (249)
T KOG1611|consen 4 KSVF-ITGAN------RGIGLGLVKELLK--DKGIEVIIATARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNF 72 (249)
T ss_pred ccEE-EeccC------cchhHHHHHHHhc--CCCcEEEEEecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHH
Confidence 4566 99999 9999999555442 2355544 38888863322222222 46999999999999999999
Q ss_pred HHHHHHhC--CCccEEEEcccccCC---CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC---------CCcEEEE
Q psy4251 103 AEEYQKKF--RSLNILVLNAGVFGL---GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK---------LFARVVV 168 (292)
Q Consensus 103 ~~~~~~~~--~~id~lI~nAg~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~---------~~~~iV~ 168 (292)
++++.+-. ..+|+||+|||+..+ ..+...+-|.+++++|.+|+.+++|+++|+|++... ..+.||+
T Consensus 73 ~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIin 152 (249)
T KOG1611|consen 73 VQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIIN 152 (249)
T ss_pred HHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEE
Confidence 99999874 479999999999743 334456679999999999999999999999987643 1358999
Q ss_pred EcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccC
Q psy4251 169 VSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFG 247 (292)
Q Consensus 169 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~ 247 (292)
+||..+-++. ..-.++.+|..||+|+.+|+++++.++.+.+|-|.++|||||+ +|......
T Consensus 153 isS~~~s~~~----------------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a~-- 214 (249)
T KOG1611|consen 153 ISSSAGSIGG----------------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKAA-- 214 (249)
T ss_pred eeccccccCC----------------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCcc--
Confidence 9998666443 1112678999999999999999999999999999999999999 99875432
Q ss_pred CccchhhhhhccccccCCHHHhhc------ccccCCCCCcccc
Q psy4251 248 TPVRTFSWISRVRPVTNFQVDLTG------TAEKVGLSGLPDS 284 (292)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~~ 284 (292)
.++||.+. .......+|.||.
T Consensus 215 ----------------ltveeSts~l~~~i~kL~~~hnG~ffn 241 (249)
T KOG1611|consen 215 ----------------LTVEESTSKLLASINKLKNEHNGGFFN 241 (249)
T ss_pred ----------------cchhhhHHHHHHHHHhcCcccCcceEc
Confidence 26666665 4455666788874
No 69
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.97 E-value=1.4e-29 Score=217.02 Aligned_cols=226 Identities=16% Similarity=0.164 Sum_probs=179.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +.+|++.|+.|+. |+.++.++..+++.+. +.++.++++|++|.++
T Consensus 6 ~~~~~k~vl-ItGa~------g~iG~~i---a~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~ 73 (255)
T PRK07523 6 FDLTGRRAL-VTGSS------QGIGYAL---AEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDA 73 (255)
T ss_pred cCCCCCEEE-EECCc------chHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHH
Confidence 357899999 99999 9999999 5556677777764 8888888888888654 4578999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++++++++.++++++|+||||||... +..+.+.++|++++++|+.+++.+++++.+.|.++.. ++||++||..+..
T Consensus 74 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~iss~~~~~ 151 (255)
T PRK07523 74 VRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGA--GKIINIASVQSAL 151 (255)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC--eEEEEEccchhcc
Confidence 99999999999999999999999863 4566788899999999999999999999999987766 8999999986655
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
+. + +...|+++|++++.++++++.++.++||+||+|+||+++ ++.+..... .....+
T Consensus 152 ~~------------~-------~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~---~~~~~~ 209 (255)
T PRK07523 152 AR------------P-------GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD---PEFSAW 209 (255)
T ss_pred CC------------C-------CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC---HHHHHH
Confidence 43 2 567899999999999999999999999999999999999 876543211 111122
Q ss_pred hhc--cccccCCHHHhhc------ccccCCCCCcc
Q psy4251 256 ISR--VRPVTNFQVDLTG------TAEKVGLSGLP 282 (292)
Q Consensus 256 ~~~--~~~~~~~~~~~a~------~~~~~~~~G~~ 282 (292)
+.. ....+..+++.|. .+.....+|+.
T Consensus 210 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~ 244 (255)
T PRK07523 210 LEKRTPAGRWGKVEELVGACVFLASDASSFVNGHV 244 (255)
T ss_pred HHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcE
Confidence 211 1123457888776 33444556654
No 70
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.97 E-value=1.6e-29 Score=224.75 Aligned_cols=189 Identities=14% Similarity=0.083 Sum_probs=165.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
..+++|+++ ||||+ +|||+++ +..|+++|+.|+ .|+.+++++..+++.+. +.++.++++|++|.++
T Consensus 4 ~~l~~k~vl-ITGas------~gIG~~l---a~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~ 71 (334)
T PRK07109 4 KPIGRQVVV-ITGAS------AGVGRAT---ARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEA 71 (334)
T ss_pred CCCCCCEEE-EECCC------CHHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHH
Confidence 457789998 99999 9999999 555667777765 49999999888888765 5688999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++++++++.++++++|++|||||.. .+..+.+.+++++.+++|+.+++.+++.++|.|.+++. ++||++||..+..
T Consensus 72 v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~--g~iV~isS~~~~~ 149 (334)
T PRK07109 72 VQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDR--GAIIQVGSALAYR 149 (334)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--cEEEEeCChhhcc
Confidence 9999999999999999999999975 35667889999999999999999999999999988766 9999999998776
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC--CCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK--YKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~--~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + ....|+++|+++..|+++++.|+.. .+|++++|+||.++ ++..+
T Consensus 150 ~~------------~-------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~ 199 (334)
T PRK07109 150 SI------------P-------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW 199 (334)
T ss_pred CC------------C-------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh
Confidence 54 2 5678999999999999999999864 47999999999999 87654
No 71
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.97 E-value=1.8e-29 Score=217.43 Aligned_cols=182 Identities=16% Similarity=0.149 Sum_probs=153.1
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.++||+++ ||||+ +|||+++ +..|++.|+.|+ .|+.+++++..+++ +.++.++++|+++.+++
T Consensus 3 ~~~~k~vl-VtGas------~gIG~~i---a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~ 67 (263)
T PRK06200 3 WLHGQVAL-ITGGG------SGIGRAL---VERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADN 67 (263)
T ss_pred CCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHH
Confidence 36789998 99999 9999999 555667787776 48877776665544 34688899999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcc----hhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDG----FETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~----~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
+++++++.++++++|+||||||+.. +..+.+.++ |++++++|+.+++.+++.++|.|.++ . ++||+++|.
T Consensus 68 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~--g~iv~~sS~ 144 (263)
T PRK06200 68 QRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-G--GSMIFTLSN 144 (263)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-C--CEEEEECCh
Confidence 9999999999999999999999853 333445544 88999999999999999999998765 3 899999998
Q ss_pred ccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 173 SHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
++..+. + +...|++||+++..|++++++++.+ +|+||+|+||+|+ ++..
T Consensus 145 ~~~~~~------------~-------~~~~Y~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~ 194 (263)
T PRK06200 145 SSFYPG------------G-------GGPLYTASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRG 194 (263)
T ss_pred hhcCCC------------C-------CCchhHHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcC
Confidence 877654 2 5678999999999999999999987 4999999999999 8764
No 72
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.97 E-value=1.9e-29 Score=217.05 Aligned_cols=228 Identities=16% Similarity=0.163 Sum_probs=176.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--c-CHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--N-CWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
.+++||+++ ||||+ +|||+++ +..|++.|+.|+. | +.+..++..+++... +.++.++++|++|.+
T Consensus 3 ~~~~~k~~l-ItGa~------~gIG~~i---a~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~ 70 (261)
T PRK08936 3 SDLEGKVVV-ITGGS------TGLGRAM---AVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVES 70 (261)
T ss_pred cCCCCCEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHH
Confidence 457899999 99999 9999999 5556677776653 5 456677777777654 567889999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESH 174 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~ 174 (292)
++.++++++.+.++++|++|||||... +..+.+.++|++++++|+.+++.+++.++|.|.++. . ++||++||..+
T Consensus 71 ~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~--g~iv~~sS~~~ 148 (261)
T PRK08936 71 DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIK--GNIINMSSVHE 148 (261)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--cEEEEEccccc
Confidence 999999999999999999999999864 345667889999999999999999999999998754 4 89999999866
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC-ccch
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT-PVRT 252 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~-~~~~ 252 (292)
..+. + +...|+++|+++..++++++.++.+.||+|++|+||+|+ ++.+....... ...+
T Consensus 149 ~~~~------------~-------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~ 209 (261)
T PRK08936 149 QIPW------------P-------LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADV 209 (261)
T ss_pred cCCC------------C-------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHH
Confidence 5443 2 567899999999999999999999999999999999999 87653211100 0011
Q ss_pred hhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 253 FSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 253 ~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.... ....+.++++.++ .......+|..+
T Consensus 210 ~~~~--~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i 244 (261)
T PRK08936 210 ESMI--PMGYIGKPEEIAAVAAWLASSEASYVTGITL 244 (261)
T ss_pred HhcC--CCCCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence 1111 1223567888876 334456677643
No 73
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.97 E-value=3e-29 Score=215.11 Aligned_cols=235 Identities=12% Similarity=0.085 Sum_probs=184.8
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
..+++||+++ ||||+ +|||+++ +..++++|+.|+ .|+.+.+++..+++++. +.++.+++||+++.+
T Consensus 6 ~~~~~~k~il-ItGas------~~IG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~ 73 (256)
T PRK06124 6 RFSLAGQVAL-VTGSA------RGLGFEI---ARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEE 73 (256)
T ss_pred ccCCCCCEEE-EECCC------chHHHHH---HHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHH
Confidence 5668999999 99999 9999999 445556777766 48888888888888654 457889999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
++.++++++...++++|++|||||... +..+.+.++|++.+++|+.+++.+++.+++.|.+++. ++||++||..+.
T Consensus 74 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~~ss~~~~ 151 (256)
T PRK06124 74 AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGY--GRIIAITSIAGQ 151 (256)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--cEEEEEeechhc
Confidence 999999999999999999999999863 4566788899999999999999999999999987776 999999998776
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
.+. + +...|+++|+++..++++++.++.+.||++++|+||.++ ++.+..... ..+..
T Consensus 152 ~~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~---~~~~~ 209 (256)
T PRK06124 152 VAR------------A-------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD---PAVGP 209 (256)
T ss_pred cCC------------C-------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC---hHHHH
Confidence 554 2 567899999999999999999999889999999999999 775443111 11111
Q ss_pred hhhc--cccccCCHHHhhc------ccccCCCCCccc-cCCcccc
Q psy4251 255 WISR--VRPVTNFQVDLTG------TAEKVGLSGLPD-SEWMWHY 290 (292)
Q Consensus 255 ~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~-~~~~w~~ 290 (292)
.+.. ....+.++++.+. .+.....+|+++ .+.-|..
T Consensus 210 ~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~~~ 254 (256)
T PRK06124 210 WLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGYSV 254 (256)
T ss_pred HHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCccc
Confidence 1110 1122467888776 444556778865 3444433
No 74
>PRK06484 short chain dehydrogenase; Validated
Probab=99.97 E-value=1.2e-29 Score=238.78 Aligned_cols=222 Identities=13% Similarity=0.125 Sum_probs=175.4
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.+.||+++ ||||+ +|||+++ +.+|+++|+.|+ .|+.++++++.+++ +.++..+++|++|++++
T Consensus 266 ~~~~k~~l-ItGas------~gIG~~~---a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~ 330 (520)
T PRK06484 266 AESPRVVA-ITGGA------RGIGRAV---ADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAV 330 (520)
T ss_pred ccCCCEEE-EECCC------cHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHH
Confidence 45789999 99999 9999999 666777887776 48887777766554 34677899999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+++++++.+++++||+||||||+.. +..+.+.++|++++++|+.++++++++++|.|. .. ++||++||.++..
T Consensus 331 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~--g~iv~isS~~~~~ 406 (520)
T PRK06484 331 ESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QG--GVIVNLGSIASLL 406 (520)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cC--CEEEEECchhhcC
Confidence 9999999999999999999999852 456778899999999999999999999999993 34 8999999998876
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC--ccchh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT--PVRTF 253 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~--~~~~~ 253 (292)
+. + +...|+++|++++.|+++++.++.++||+||+|+||+|+ ++.+....... ...+.
T Consensus 407 ~~------------~-------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 467 (520)
T PRK06484 407 AL------------P-------PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIR 467 (520)
T ss_pred CC------------C-------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHH
Confidence 54 2 677999999999999999999999999999999999999 87654321100 00111
Q ss_pred hhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 254 SWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 254 ~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
... ....+.+|++.|. .+.....+|+.+
T Consensus 468 ~~~--~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i 501 (520)
T PRK06484 468 RRI--PLGRLGDPEEVAEAIAFLASPAASYVNGATL 501 (520)
T ss_pred hcC--CCCCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence 111 1123468888886 334455677654
No 75
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.97 E-value=2.2e-29 Score=217.98 Aligned_cols=185 Identities=15% Similarity=0.109 Sum_probs=160.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++|++++ ||||+ +|||+++ +.+|+++|+.|+ .|+.+++++..+++. ++.++++|++|++++
T Consensus 2 ~~~~~~il-VtGas------ggiG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~ 65 (273)
T PRK07825 2 DLRGKVVA-ITGGA------RGIGLAT---ARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASF 65 (273)
T ss_pred CCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHH
Confidence 46788988 99999 9999999 555667777765 488888777665542 577899999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++++.+.++++|++|||||+.. +..+.+.+.+++++++|+.+++.+++.++|.|.+++. ++||++||..+..+
T Consensus 66 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~ 143 (273)
T PRK07825 66 AAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGR--GHVVNVASLAGKIP 143 (273)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CEEEEEcCccccCC
Confidence 9999999999999999999999863 4556678889999999999999999999999988777 89999999987765
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
. + +...|++||+++..|+++++.++.++||++++|+||++. ++....
T Consensus 144 ~------------~-------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~ 191 (273)
T PRK07825 144 V------------P-------GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT 191 (273)
T ss_pred C------------C-------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence 4 2 677899999999999999999999999999999999999 876543
No 76
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.97 E-value=3.3e-29 Score=214.47 Aligned_cols=223 Identities=16% Similarity=0.160 Sum_probs=172.3
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
||+++ ||||+ +|||+++ +..+++.|..|++ |+.+++++..+++.+. +.++.++++|++|+++++++
T Consensus 1 ~k~~l-ItG~s------~giG~~i---a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~ 68 (252)
T PRK07677 1 EKVVI-ITGGS------SGMGKAM---AKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKM 68 (252)
T ss_pred CCEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHH
Confidence 57888 99999 9999999 5556677877764 8888888887777654 45789999999999999999
Q ss_pred HHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccccccC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~~~ 179 (292)
++++.+.++++|++|||||.. .+..+.+.++|++++++|+.++++++++++|.|.+.. . ++||++||..+..+.
T Consensus 69 ~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--g~ii~isS~~~~~~~- 145 (252)
T PRK07677 69 VEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIK--GNIINMVATYAWDAG- 145 (252)
T ss_pred HHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCC--EEEEEEcChhhccCC-
Confidence 999999999999999999964 3456778899999999999999999999999986543 4 899999998766543
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC-CCeEEEEecCCccc-ccc-ccccccCCccchhhhh
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK-YKIALSSRHCCWKI-TVS-KKWWRFGTPVRTFSWI 256 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~gi~v~~v~PG~v~-~~~-~~~~~~~~~~~~~~~~ 256 (292)
+ ....|++||+++.+|+++++.++.+ +||+||+|+||+++ +.. ...... ......+
T Consensus 146 -----------~-------~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~---~~~~~~~ 204 (252)
T PRK07677 146 -----------P-------GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWES---EEAAKRT 204 (252)
T ss_pred -----------C-------CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCC---HHHHHHH
Confidence 2 5568999999999999999999964 69999999999998 432 221110 1111111
Q ss_pred hc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 257 SR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 257 ~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.+ ....+.++++.++ .+.....+|+.+
T Consensus 205 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~ 239 (252)
T PRK07677 205 IQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCI 239 (252)
T ss_pred hccCCCCCCCCHHHHHHHHHHHcCccccccCCCEE
Confidence 01 1123567888876 344456777654
No 77
>PRK12743 oxidoreductase; Provisional
Probab=99.97 E-value=3.2e-29 Score=215.07 Aligned_cols=185 Identities=16% Similarity=0.139 Sum_probs=159.1
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
+|+++ ||||+ +|||+++ +..+++.|+.|+. ++.+.+++..+++... +.++.++++|+++.+++++
T Consensus 2 ~k~vl-ItGas------~giG~~~---a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~ 69 (256)
T PRK12743 2 AQVAI-VTASD------SGIGKAC---ALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQ 69 (256)
T ss_pred CCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHH
Confidence 67888 99999 9999999 5556678887753 4667777777777655 5689999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccccccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYSY 178 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~~ 178 (292)
+++++.++++++|+||||||... +..+.+.+++++.+++|+.+++.+++++.++|.+++ . ++||++||..+..+.
T Consensus 70 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~--g~ii~isS~~~~~~~ 147 (256)
T PRK12743 70 ALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQG--GRIINITSVHEHTPL 147 (256)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--eEEEEEeeccccCCC
Confidence 99999999999999999999864 345678889999999999999999999999996543 4 899999998765543
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+++|+++.+++++++.++.++||++|+|+||.++ ++.+.
T Consensus 148 ------------~-------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~ 193 (256)
T PRK12743 148 ------------P-------GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGM 193 (256)
T ss_pred ------------C-------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccc
Confidence 2 677999999999999999999999999999999999999 87654
No 78
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.97 E-value=5.1e-29 Score=219.20 Aligned_cols=189 Identities=19% Similarity=0.245 Sum_probs=159.5
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--c-CHHHHHHHHHHHHhhCCCCceEEEEccCCCh
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--N-CWDKANDAISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
..+++||+++ ||||+ +|||+++ +.+|+++|+.|++ + +.+..++..+++++. +.++.++++|++|.
T Consensus 7 ~~~l~~k~~l-VTGas------~gIG~~i---a~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~ 74 (306)
T PRK07792 7 TTDLSGKVAV-VTGAA------AGLGRAE---ALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQR 74 (306)
T ss_pred CcCCCCCEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCH
Confidence 3678999999 99999 9999999 6667778877764 3 456677888888765 56899999999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-----CCCcEEEEE
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-----KLFARVVVV 169 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-----~~~~~iV~v 169 (292)
+++.++++++.+ ++++|+||||||+.. .+.+.+.++|+..+++|+.+++.+++++.|+|.++. ...|+||++
T Consensus 75 ~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~i 153 (306)
T PRK07792 75 ATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNT 153 (306)
T ss_pred HHHHHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEE
Confidence 999999999998 899999999999864 345678889999999999999999999999986431 012799999
Q ss_pred cCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 170 SSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 170 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
||.++..+. + +...|+++|+++..|+++++.++.++||+||+|+||. . +|..
T Consensus 154 sS~~~~~~~------------~-------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~ 206 (306)
T PRK07792 154 SSEAGLVGP------------V-------GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTA 206 (306)
T ss_pred CCcccccCC------------C-------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhh
Confidence 998776554 2 5678999999999999999999999999999999994 6 6654
No 79
>PLN02253 xanthoxin dehydrogenase
Probab=99.97 E-value=2.4e-29 Score=218.63 Aligned_cols=190 Identities=18% Similarity=0.126 Sum_probs=161.1
Q ss_pred CCCCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCC
Q psy4251 18 HPASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCR 95 (292)
Q Consensus 18 ~~~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~ 95 (292)
.|..+++||+++ ||||+ +|||+++ +.+|++.|+.|+. |+.+..++..+++.. +.++.++++|++|
T Consensus 11 ~~~~~l~~k~~l-ItGas------~gIG~~l---a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d 77 (280)
T PLN02253 11 LPSQRLLGKVAL-VTGGA------TGIGESI---VRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTV 77 (280)
T ss_pred ccccccCCCEEE-EECCC------chHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCC
Confidence 345678899999 99999 9999999 5556677877764 677666666665521 3578999999999
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcC
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSS 171 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS 171 (292)
.++++++++++.++++++|+||||||... +..+.+.++++.++++|+.++++++++++|.|.+... ++||+++|
T Consensus 78 ~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--g~ii~isS 155 (280)
T PLN02253 78 EDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKK--GSIVSLCS 155 (280)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--ceEEEecC
Confidence 99999999999999999999999999863 2456778899999999999999999999999976666 89999999
Q ss_pred cccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 172 ESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
..+..+. + +...|++||++++.+++++++++...||+||+++||.+. ++..
T Consensus 156 ~~~~~~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~ 207 (280)
T PLN02253 156 VASAIGG------------L-------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALAL 207 (280)
T ss_pred hhhcccC------------C-------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence 8876543 2 456899999999999999999999999999999999999 7654
No 80
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.97 E-value=3.6e-29 Score=215.08 Aligned_cols=226 Identities=12% Similarity=0.028 Sum_probs=174.3
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ |||++ +|||+++ +..+++.|+.|+ .|+.+++++..+++.+.. +.++.++++|+++++++
T Consensus 4 ~~~~k~vl-ItG~~------~giG~~i---a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~ 72 (259)
T PRK06125 4 HLAGKRVL-ITGAS------KGIGAAA---AEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAR 72 (259)
T ss_pred CCCCCEEE-EeCCC------chHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHH
Confidence 47899999 99999 9999999 555666777765 488888888888886543 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++. ++++|++|||||... ++.+.+.++|+.++++|+.++++++++++|.|.++.. ++||++||..+..+
T Consensus 73 ~~~~~~----~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~iss~~~~~~ 146 (259)
T PRK06125 73 EQLAAE----AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGS--GVIVNVIGAAGENP 146 (259)
T ss_pred HHHHHH----hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--cEEEEecCccccCC
Confidence 888764 478999999999863 4667889999999999999999999999999987766 89999999876554
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccccccc------CCcc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRF------GTPV 250 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~------~~~~ 250 (292)
. + ....|+++|+++..++++++.++.++||+||+|+||+++ ++....... ..+.
T Consensus 147 ~------------~-------~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~ 207 (259)
T PRK06125 147 D------------A-------DYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDES 207 (259)
T ss_pred C------------C-------CchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHH
Confidence 3 2 566899999999999999999999999999999999999 764432100 0010
Q ss_pred chhhhhhc-cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 251 RTFSWISR-VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 251 ~~~~~~~~-~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.+-..... ....+.+|++.|. .+.....+|..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i 247 (259)
T PRK06125 208 RWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVV 247 (259)
T ss_pred HHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceE
Confidence 01011100 1123468888887 444556778765
No 81
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.97 E-value=2.9e-30 Score=225.13 Aligned_cols=227 Identities=10% Similarity=0.015 Sum_probs=159.1
Q ss_pred CCCCCceEEEEcCC--CCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-HHHHHHHHHHHHh--------hCCCC-----
Q psy4251 21 STYNGCLAILCTGD--MEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-WDKANDAISKILT--------EKPSA----- 84 (292)
Q Consensus 21 ~~l~g~~~vlItGa--~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-~~~~~~~~~~l~~--------~~~~~----- 84 (292)
.+++||+++ |||+ + +|||+++ +..|+++|+.|++.+ .+.++...+.... ...+.
T Consensus 4 ~~~~gk~al-ITGa~~~------~GIG~a~---A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (299)
T PRK06300 4 IDLTGKIAF-IAGIGDD------QGYGWGI---AKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFA 73 (299)
T ss_pred cCCCCCEEE-EeCCCCC------CCHHHHH---HHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhh
Confidence 578899999 9999 6 8999999 777889999888622 1111111111000 00011
Q ss_pred ceEEEEccCCCh------------------HHHHHHHHHHHHhCCCccEEEEccccc----CCCCCCCCcchhhhhhhhh
Q psy4251 85 QCIAMELDLCRL------------------KSVKKFAEEYQKKFRSLNILVLNAGVF----GLGFSHTEDGFETTFQVNH 142 (292)
Q Consensus 85 ~~~~~~~Dls~~------------------~~v~~~~~~~~~~~~~id~lI~nAg~~----~~~~~~~~~~~~~~~~vN~ 142 (292)
++..+.+|+++. ++++++++++.++++++|+||||||.. .++.+.+.++|++.+++|+
T Consensus 74 ~~~~~~~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl 153 (299)
T PRK06300 74 KIYPMDASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSS 153 (299)
T ss_pred hHHHhhhhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHh
Confidence 111223444443 368999999999999999999999864 3567889999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhh-hHHHHhHHHHHHHHHHHHhHh
Q psy4251 143 LAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAM-TAYNDTKLCNVLFGEKLATLW 221 (292)
Q Consensus 143 ~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~ 221 (292)
.|+++++++++|+|.+ . |+||+++|..+..+. + .. ..|++||+++..|+++++.|+
T Consensus 154 ~g~~~l~~a~~p~m~~--~--G~ii~iss~~~~~~~------------p-------~~~~~Y~asKaAl~~lt~~la~el 210 (299)
T PRK06300 154 YSFVSLLSHFGPIMNP--G--GSTISLTYLASMRAV------------P-------GYGGGMSSAKAALESDTKVLAWEA 210 (299)
T ss_pred HHHHHHHHHHHHHhhc--C--CeEEEEeehhhcCcC------------C-------CccHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999974 3 899999998776543 1 33 379999999999999999999
Q ss_pred cC-CCeEEEEecCCccc-cccccccccCCccchhhhhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 222 YK-YKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 222 ~~-~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.+ +||+||+|+||+++ ++.+.... +......... ......+|++.+. ++.....+|+.+
T Consensus 211 ~~~~gIrVn~V~PG~v~T~~~~~~~~---~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i 279 (299)
T PRK06300 211 GRRWGIRVNTISAGPLASRAGKAIGF---IERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETL 279 (299)
T ss_pred CCCCCeEEEEEEeCCccChhhhcccc---cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence 86 59999999999999 87643211 0011111100 1122457888776 444456677644
No 82
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.97 E-value=5.1e-29 Score=213.52 Aligned_cols=225 Identities=17% Similarity=0.202 Sum_probs=173.6
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||.++ +..|+++|+.|+. |+.+. .+..+++. +.++.++++|++++++
T Consensus 11 ~~~~~k~vl-ItGas------~~IG~~l---a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~----~~~~~~~~~Dl~~~~~ 75 (255)
T PRK06841 11 FDLSGKVAV-VTGGA------SGIGHAI---AELFAAKGARVALLDRSEDV-AEVAAQLL----GGNAKGLVCDVSDSQS 75 (255)
T ss_pred cCCCCCEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHH-HHHHHHhh----CCceEEEEecCCCHHH
Confidence 467899999 99999 9999999 5556677777764 66543 23333332 3467789999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+.++++|++|||||... +..+.+.++++.++++|+.+++.+++.++|.|.++.. ++||++||..+..
T Consensus 76 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~~ 153 (255)
T PRK06841 76 VEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGG--GKIVNLASQAGVV 153 (255)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC--ceEEEEcchhhcc
Confidence 99999999999999999999999863 3456678899999999999999999999999987766 8999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
+. + ....|+++|+++..++++++.++.++||+||+|+||+|+ ++.+..+.......+...
T Consensus 154 ~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 214 (255)
T PRK06841 154 AL------------E-------RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKL 214 (255)
T ss_pred CC------------C-------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhc
Confidence 54 2 567899999999999999999999889999999999999 876543221010111111
Q ss_pred hhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 256 ISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 256 ~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
. ....+.++++.+. .......+|+.+
T Consensus 215 ~--~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i 246 (255)
T PRK06841 215 I--PAGRFAYPEEIAAAALFLASDAAAMITGENL 246 (255)
T ss_pred C--CCCCCcCHHHHHHHHHHHcCccccCccCCEE
Confidence 1 1223568888887 344555677754
No 83
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.97 E-value=7.7e-29 Score=211.68 Aligned_cols=188 Identities=16% Similarity=0.169 Sum_probs=161.8
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE---EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY---QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~---~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+.|++++ ||||+ +|||+++ +..|.+.|+.|+ .|+.++.++..+++++. +.++.++++|++|++++
T Consensus 2 ~~~~~vl-ItGa~------g~iG~~~---a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 69 (250)
T PRK08063 2 FSGKVAL-VTGSS------RGIGKAI---ALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKI 69 (250)
T ss_pred CCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHH
Confidence 4578888 99999 9999999 555667777654 47888888888888665 56889999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++++.+.++++|+||||||.. .+..+.+.++++.++++|+.+++.++++++|.+.+++. ++||++||..+..+
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~ 147 (250)
T PRK08063 70 KEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGG--GKIISLSSLGSIRY 147 (250)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--eEEEEEcchhhccC
Confidence 999999999999999999999975 35567788889999999999999999999999987766 89999999866544
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
. + +...|+++|++++.|+++++.++.+.||++++|+||++. ++....
T Consensus 148 ~------------~-------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~ 195 (250)
T PRK08063 148 L------------E-------NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHF 195 (250)
T ss_pred C------------C-------CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhc
Confidence 3 2 567899999999999999999998889999999999999 776543
No 84
>PRK06398 aldose dehydrogenase; Validated
Probab=99.97 E-value=1.7e-29 Score=216.97 Aligned_cols=177 Identities=18% Similarity=0.102 Sum_probs=153.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +..+++.|+.|+. |+.+. ..++.+++||++|+++
T Consensus 2 ~~l~gk~vl-ItGas------~gIG~~i---a~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~ 58 (258)
T PRK06398 2 LGLKDKVAI-VTGGS------QGIGKAV---VNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQ 58 (258)
T ss_pred CCCCCCEEE-EECCC------chHHHHH---HHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHH
Confidence 357899999 99999 9999999 5567778887774 54321 1267889999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++++++++.++++++|+||||||.. .+..+.+.++|++.+++|+.+++.++++++|+|.+++. ++||++||..+..
T Consensus 59 i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~isS~~~~~ 136 (258)
T PRK06398 59 VIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDK--GVIINIASVQSFA 136 (258)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--eEEEEeCcchhcc
Confidence 9999999999999999999999985 34567788999999999999999999999999987766 9999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + +...|++||++++.++++++.|+.+. |+||+|+||+++ ++...
T Consensus 137 ~~------------~-------~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~ 183 (258)
T PRK06398 137 VT------------R-------NAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEW 183 (258)
T ss_pred CC------------C-------CCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhh
Confidence 54 2 67789999999999999999999875 999999999999 87654
No 85
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.97 E-value=4.4e-29 Score=214.56 Aligned_cols=184 Identities=13% Similarity=0.112 Sum_probs=156.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
..+++|+++ ||||+ +|||+++ +.+|+++|+.|+. |+. ..++..+++... +.++.++++|+++.++
T Consensus 4 ~~~~~k~vl-VtGas------~gIG~~l---a~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~ 70 (260)
T PRK12823 4 QRFAGKVVV-VTGAA------QGIGRGV---ALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAG 70 (260)
T ss_pred cccCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHH
Confidence 457899999 99999 9999999 6667778877764 664 345556666544 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEccccc---CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVF---GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+.++++++.++++++|+||||||.. .+..+.+.++++..+++|+.+++.+++.++|.|.+++. ++||++||..+.
T Consensus 71 ~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~ 148 (260)
T PRK12823 71 AQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGG--GAIVNVSSIATR 148 (260)
T ss_pred HHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CeEEEEcCcccc
Confidence 9999999999999999999999964 35567788999999999999999999999999987766 899999998654
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
. . ....|++||++++.|+++++.++.++||+||+|+||+|. ++.
T Consensus 149 ~-~--------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 193 (260)
T PRK12823 149 G-I--------------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPR 193 (260)
T ss_pred C-C--------------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcch
Confidence 2 1 345799999999999999999999999999999999999 763
No 86
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.97 E-value=6e-29 Score=212.67 Aligned_cols=222 Identities=13% Similarity=0.073 Sum_probs=168.5
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++++|+++ ||||+ +|||+++ +..|.+.|+.|+. |+.++.++..+++ +.++.++++|+++.++
T Consensus 2 ~l~~k~il-ItGas------~gIG~~l---a~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~ 66 (253)
T PRK08642 2 QISEQTVL-VTGGS------RGLGAAI---ARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQ 66 (253)
T ss_pred CCCCCEEE-EeCCC------CcHHHHH---HHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHH
Confidence 46788999 99999 9999999 5557778877753 3455554444333 2478899999999999
Q ss_pred HHHHHHHHHHhCCC-ccEEEEcccccC--------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEE
Q psy4251 99 VKKFAEEYQKKFRS-LNILVLNAGVFG--------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVV 169 (292)
Q Consensus 99 v~~~~~~~~~~~~~-id~lI~nAg~~~--------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~v 169 (292)
+.++++++.+.+++ +|++|||||... +..+.+.+++++.+++|+.+++.+++.++|.|.+... ++||++
T Consensus 67 ~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~i 144 (253)
T PRK08642 67 VQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGF--GRIINI 144 (253)
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCC--eEEEEE
Confidence 99999999988887 999999998741 2455677889999999999999999999999977666 899999
Q ss_pred cCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC
Q psy4251 170 SSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT 248 (292)
Q Consensus 170 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~ 248 (292)
+|..+..+. . +...|+++|++++.+++++++++.+.||+||+|+||+++ +........
T Consensus 145 ss~~~~~~~------------~-------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~-- 203 (253)
T PRK08642 145 GTNLFQNPV------------V-------PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPD-- 203 (253)
T ss_pred CCccccCCC------------C-------CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCH--
Confidence 997554332 1 456899999999999999999999999999999999999 654332111
Q ss_pred ccchhhhhhccc--cccCCHHHhhc------ccccCCCCCccc
Q psy4251 249 PVRTFSWISRVR--PVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 249 ~~~~~~~~~~~~--~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.......+.. .-..+|++.|. .+.....+|..+
T Consensus 204 --~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~ 244 (253)
T PRK08642 204 --EVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNL 244 (253)
T ss_pred --HHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEE
Confidence 1111111111 23568888877 344456677644
No 87
>PRK05717 oxidoreductase; Validated
Probab=99.97 E-value=7.2e-29 Score=212.70 Aligned_cols=185 Identities=18% Similarity=0.130 Sum_probs=155.6
Q ss_pred CCCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCCh
Q psy4251 19 PASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 19 ~~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
|..+++||+++ ||||+ +|||+++ +..|+++|..|+. |+.++.++..+++ +.++.++++|+++.
T Consensus 4 ~~~~~~~k~vl-ItG~s------g~IG~~~---a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~ 68 (255)
T PRK05717 4 PNPGHNGRVAL-VTGAA------RGIGLGI---AAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADE 68 (255)
T ss_pred CCcccCCCEEE-EeCCc------chHHHHH---HHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCH
Confidence 56788999999 99999 9999999 5556677777664 6766665554433 34688999999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
+++.++++++.++++++|++|||||... +..+.+.++|+..+++|+.+++.++++++|.|.+. . ++||++||.
T Consensus 69 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~--g~ii~~sS~ 145 (255)
T PRK05717 69 AQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-N--GAIVNLAST 145 (255)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-C--cEEEEEcch
Confidence 9999999999999999999999999863 23456788999999999999999999999999764 3 899999998
Q ss_pred ccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 173 SHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
.+..+. + ....|+++|++++.+++++++++.. +|+|++++||++. ++..
T Consensus 146 ~~~~~~------------~-------~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~ 195 (255)
T PRK05717 146 RARQSE------------P-------DTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPS 195 (255)
T ss_pred hhcCCC------------C-------CCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccc
Confidence 776554 2 4568999999999999999999976 5999999999999 7644
No 88
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.97 E-value=1.5e-28 Score=210.79 Aligned_cols=223 Identities=16% Similarity=0.085 Sum_probs=169.5
Q ss_pred CCCCceEEEEcCCCCCCCCcc--cchhhHHHHHHHHhhcCcEEEE--cC-----------HHHHHHHHHHHHhhCCCCce
Q psy4251 22 TYNGCLAILCTGDMEFYPRYT--GLKKKDGNLCFDLVQSSKLFYQ--NC-----------WDKANDAISKILTEKPSAQC 86 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~--GiG~~~a~~~~~l~~~g~~v~~--r~-----------~~~~~~~~~~l~~~~~~~~~ 86 (292)
+++||+++ ||||+ + |||.++ +..++..|+.|++ |+ ........+++... +.++
T Consensus 2 ~l~~k~vl-ItGas------~~~giG~~l---a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 69 (256)
T PRK12748 2 PLMKKIAL-VTGAS------RLNGIGAAV---CRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRC 69 (256)
T ss_pred CCCCcEEE-EeCCC------CCCCHHHHH---HHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeE
Confidence 46789998 99998 6 899999 5556667766664 54 22222344445433 4579
Q ss_pred EEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCc
Q psy4251 87 IAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFA 164 (292)
Q Consensus 87 ~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~ 164 (292)
.++++|+++.+++..+++++.++++++|+||||||+.. +..+.+.++++..+++|+.+++.+++++++.|.++.. +
T Consensus 70 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~ 147 (256)
T PRK12748 70 EHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAG--G 147 (256)
T ss_pred EEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC--e
Confidence 99999999999999999999999999999999999863 4556688889999999999999999999999976655 8
Q ss_pred EEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 165 RVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 165 ~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+||++||..+..+. + +...|+++|++++.+++++++++...||+|++++||.++ ++....
T Consensus 148 ~iv~~ss~~~~~~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~ 208 (256)
T PRK12748 148 RIINLTSGQSLGPM------------P-------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE 208 (256)
T ss_pred EEEEECCccccCCC------------C-------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh
Confidence 99999998765543 2 567899999999999999999998889999999999999 765432
Q ss_pred cccCCccchhhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 244 WRFGTPVRTFSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
... .+.... ......+|++.|+ .+.....+|.++
T Consensus 209 ~~~----~~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~ 248 (256)
T PRK12748 209 LKH----HLVPKF--PQGRVGEPVDAARLIAFLVSEEAKWITGQVI 248 (256)
T ss_pred HHH----hhhccC--CCCCCcCHHHHHHHHHHHhCcccccccCCEE
Confidence 111 111111 1112456777776 444456677765
No 89
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.97 E-value=1.2e-28 Score=209.99 Aligned_cols=187 Identities=17% Similarity=0.147 Sum_probs=159.9
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++|+++ |||++ +|||+++ +..|+++|+.|+. ++.++.++..+++... +.++..+++|++|.+++
T Consensus 1 ~~~k~~l-VtG~s------~giG~~~---a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 68 (246)
T PRK12938 1 MSQRIAY-VTGGM------GGIGTSI---CQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDST 68 (246)
T ss_pred CCCCEEE-EECCC------ChHHHHH---HHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHH
Confidence 4678888 99999 9999999 5556777877664 4556666666666544 55788899999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++++.+.++++|+||||||... +..+.+.+++++.+++|+.+++.++++++|.+.++.. ++||++||..+..+
T Consensus 69 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~isS~~~~~~ 146 (246)
T PRK12938 69 KAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGW--GRIINISSVNGQKG 146 (246)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--eEEEEEechhccCC
Confidence 9999999999999999999999863 3566788899999999999999999999999987766 89999999876654
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
. + +...|+.+|+++..+++++++++...||++++|+||++. ++.+.
T Consensus 147 ~------------~-------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~ 193 (246)
T PRK12938 147 Q------------F-------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA 193 (246)
T ss_pred C------------C-------CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh
Confidence 3 2 567899999999999999999999999999999999999 87654
No 90
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=1e-28 Score=235.20 Aligned_cols=190 Identities=15% Similarity=0.163 Sum_probs=167.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
...++++++ ||||+ +|||+++ +.+|++.|+.|+ .|+.++++++.++++.. +.++.+++||++|.++
T Consensus 311 ~~~~~~~~l-v~G~s------~giG~~~---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~ 378 (582)
T PRK05855 311 GPFSGKLVV-VTGAG------SGIGRET---ALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADA 378 (582)
T ss_pred ccCCCCEEE-EECCc------CHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHH
Confidence 456778888 99999 9999999 566677787766 48888888888888765 4578999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~ 175 (292)
+.++++++.++++++|+||||||+.. +..+.+.++++.++++|+.|++.++++++|.|.+++ . |+||++||.++.
T Consensus 379 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~ 456 (582)
T PRK05855 379 MEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTG--GHIVNVASAAAY 456 (582)
T ss_pred HHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--cEEEEECChhhc
Confidence 99999999999999999999999863 456778899999999999999999999999998764 4 899999999887
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
.+. + +...|++||++++.++++++.++.++||+|++|+||+|+ ++.+..
T Consensus 457 ~~~------------~-------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~ 506 (582)
T PRK05855 457 APS------------R-------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATT 506 (582)
T ss_pred cCC------------C-------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcc
Confidence 654 2 678999999999999999999999999999999999999 887764
No 91
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.97 E-value=2.2e-28 Score=208.73 Aligned_cols=203 Identities=16% Similarity=0.103 Sum_probs=170.0
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+|+++ ||||+ +|||+++++ +|++.|..|+ .|+.++.++..+++.+..++.++.++++|+++.+++.++
T Consensus 2 ~k~vl-ItGas------~giG~~la~---~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (248)
T PRK08251 2 RQKIL-ITGAS------SGLGAGMAR---EFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEV 71 (248)
T ss_pred CCEEE-EECCC------CHHHHHHHH---HHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHH
Confidence 57888 99999 999999944 4556676665 588888888888887776677899999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
++++.++++++|++|||||+.. +..+.+.+.+++++++|+.+++.+++.++|.+++.+. ++||++||..+..+..
T Consensus 72 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~- 148 (248)
T PRK08251 72 FAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS--GHLVLISSVSAVRGLP- 148 (248)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CeEEEEeccccccCCC-
Confidence 9999999999999999999864 3345567788999999999999999999999987766 8999999987765531
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhhcc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISRV 259 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~~ 259 (292)
. +...|+.||+++..++++++.++...||++++|+||++. ++.+.....
T Consensus 149 ----------~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~------------- 198 (248)
T PRK08251 149 ----------G-------VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKST------------- 198 (248)
T ss_pred ----------C-------CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccccC-------------
Confidence 1 356899999999999999999999889999999999999 877654221
Q ss_pred ccccCCHHHhhc
Q psy4251 260 RPVTNFQVDLTG 271 (292)
Q Consensus 260 ~~~~~~~~~~a~ 271 (292)
++..+++++|+
T Consensus 199 -~~~~~~~~~a~ 209 (248)
T PRK08251 199 -PFMVDTETGVK 209 (248)
T ss_pred -CccCCHHHHHH
Confidence 13457888886
No 92
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.97 E-value=1.2e-28 Score=210.42 Aligned_cols=212 Identities=18% Similarity=0.139 Sum_probs=167.5
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||++++++ +++.|+.|+ .|+.+..++..+++... +.++.++++|+++.+++
T Consensus 3 ~~~~k~vl-ItGas------g~iG~~la~~---l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~ 70 (250)
T PRK07774 3 RFDDKVAI-VTGAA------GGIGQAYAEA---LAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSA 70 (250)
T ss_pred ccCCCEEE-EECCC------chHHHHHHHH---HHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHH
Confidence 46789988 99999 9999999555 556676666 47877777777777654 34678899999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC-----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG-----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESH 174 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~ 174 (292)
+++++++.++++++|+||||||+.. +..+.+.+++++++++|+.+++.++++++|.+.+.+. ++||++||..+
T Consensus 71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~sS~~~ 148 (250)
T PRK07774 71 KAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGG--GAIVNQSSTAA 148 (250)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCC--cEEEEEecccc
Confidence 9999999999999999999999853 2345677889999999999999999999999987666 89999999865
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchh
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTF 253 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~ 253 (292)
.. +...|++||++++.+++++++++...||+++.++||.++ ++.+............
T Consensus 149 ~~----------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~ 206 (250)
T PRK07774 149 WL----------------------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMV 206 (250)
T ss_pred cC----------------------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHH
Confidence 43 345799999999999999999998889999999999999 7765432211111111
Q ss_pred hhhhccccccCCHHHhhc
Q psy4251 254 SWISRVRPVTNFQVDLTG 271 (292)
Q Consensus 254 ~~~~~~~~~~~~~~~~a~ 271 (292)
..+ ......++++.++
T Consensus 207 ~~~--~~~~~~~~~d~a~ 222 (250)
T PRK07774 207 KGI--PLSRMGTPEDLVG 222 (250)
T ss_pred hcC--CCCCCcCHHHHHH
Confidence 111 1223567888776
No 93
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.97 E-value=7.7e-29 Score=212.80 Aligned_cols=184 Identities=10% Similarity=0.066 Sum_probs=156.1
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+++++ ||||+ +|||.++ +..|++.|+.|+ .|+.+++++..+++... + ++.++++|+++.+++.++
T Consensus 2 ~~~vl-ItGas------~gIG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~ 68 (257)
T PRK07024 2 PLKVF-ITGAS------SGIGQAL---AREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAA 68 (257)
T ss_pred CCEEE-EEcCC------cHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHH
Confidence 46788 99999 9999999 555666777765 48888777766665432 2 789999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccCC--C-CCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGL--G-FSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~--~-~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
++++.++++++|++|||||.... . .+.+.++++.++++|+.|++.+++.++|.|.+++. ++||++||..+..+.
T Consensus 69 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~--~~iv~isS~~~~~~~- 145 (257)
T PRK07024 69 AADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARR--GTLVGIASVAGVRGL- 145 (257)
T ss_pred HHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCC--CEEEEEechhhcCCC-
Confidence 99999999999999999998642 2 22567889999999999999999999999988777 999999998877654
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ ....|++||++++.++++++.++..+||++++|+||+|. ++...
T Consensus 146 -----------~-------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (257)
T PRK07024 146 -----------P-------GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH 191 (257)
T ss_pred -----------C-------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc
Confidence 2 567899999999999999999999999999999999999 87653
No 94
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.97 E-value=3e-28 Score=209.74 Aligned_cols=229 Identities=17% Similarity=0.167 Sum_probs=174.3
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++|+++ ||||+ +|||+++ +..|+++|+.|+. |+.+ ..+..+++.+. +.++.++++|+++.+++
T Consensus 3 ~~~~~~~l-ItG~s------~giG~~l---a~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v 69 (263)
T PRK08226 3 KLTGKTAL-ITGAL------QGIGEGI---ARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASV 69 (263)
T ss_pred CCCCCEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHH
Confidence 46789999 99999 9999999 5556677777764 6654 44555555543 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
+++++++.++++++|+||||||... +..+.+.+++++.+++|+.+++.+++.++|.+.+... ++||++||..+...
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~isS~~~~~~ 147 (263)
T PRK08226 70 AAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKD--GRIVMMSSVTGDMV 147 (263)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--cEEEEECcHHhccc
Confidence 9999999999999999999999853 4566778889999999999999999999999977666 89999999766422
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccC---Cccchh
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFG---TPVRTF 253 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~---~~~~~~ 253 (292)
.. + +...|+.+|++++.++++++.++.+.||+|++|+||+++ ++.+...... .+....
T Consensus 148 ~~-----------~-------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~ 209 (263)
T PRK08226 148 AD-----------P-------GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVL 209 (263)
T ss_pred CC-----------C-------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHH
Confidence 11 2 567899999999999999999999889999999999999 8776532110 111122
Q ss_pred hhhhcccc--ccCCHHHhhc------ccccCCCCCccc
Q psy4251 254 SWISRVRP--VTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 254 ~~~~~~~~--~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
..+.+..| .+.+|++.|. ++.....+|+.+
T Consensus 210 ~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i 247 (263)
T PRK08226 210 TEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQN 247 (263)
T ss_pred HHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceE
Confidence 22211112 2458888887 344456666643
No 95
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.97 E-value=1.4e-28 Score=213.28 Aligned_cols=234 Identities=15% Similarity=0.076 Sum_probs=164.6
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+|+++ |||+ +|||+++|+. |. +|..|+ .|+.+++++..+++... +.++.++++|++|.+++.++
T Consensus 2 ~k~~l-ItGa-------~gIG~~la~~---l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~ 67 (275)
T PRK06940 2 KEVVV-VIGA-------GGIGQAIARR---VG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKAL 67 (275)
T ss_pred CCEEE-EECC-------ChHHHHHHHH---Hh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHH
Confidence 46777 9996 7999999555 43 576665 48888888888877654 45788999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC-C-
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI-T- 180 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~-~- 180 (292)
++++ ++++++|+||||||+.. ..++++.++++|+.+++++++.++|.|.++ +++|+++|.++..... .
T Consensus 68 ~~~~-~~~g~id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~----g~iv~isS~~~~~~~~~~~ 137 (275)
T PRK06940 68 AATA-QTLGPVTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAPG----GAGVVIASQSGHRLPALTA 137 (275)
T ss_pred HHHH-HhcCCCCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhhC----CCEEEEEecccccCcccch
Confidence 9998 56789999999999752 235799999999999999999999999643 7889999987654320 0
Q ss_pred C-----CCCCccccCcC---CCCCC-hhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCcc
Q psy4251 181 K-----DTISKSVLSVE---NYSDF-WAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPV 250 (292)
Q Consensus 181 ~-----~~~~~~~~~~~---~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~ 250 (292)
. ..+..+++... .+..+ .+...|++||+++.+++++++.++.++||+||+|+||+++ ++....... ...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~-~~~ 216 (275)
T PRK06940 138 EQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG-PRG 216 (275)
T ss_pred hhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcC-Cch
Confidence 0 00001110000 00000 1457899999999999999999999999999999999999 876432111 000
Q ss_pred chhhhhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 251 RTFSWISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 251 ~~~~~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.....+.. ......+|++.|. ++.....+|+.+
T Consensus 217 ~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i 257 (275)
T PRK06940 217 DGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDF 257 (275)
T ss_pred HHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceE
Confidence 11111100 1123568888887 445566777643
No 96
>PRK09186 flagellin modification protein A; Provisional
Probab=99.96 E-value=2.3e-28 Score=209.53 Aligned_cols=233 Identities=13% Similarity=0.066 Sum_probs=174.6
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
++||+++ ||||+ +|||+++ +..|++.|+.|+ .|+.+++++..+++....++..+.+++||++|++++.
T Consensus 2 ~~~k~vl-ItGas------~giG~~~---a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~ 71 (256)
T PRK09186 2 LKGKTIL-ITGAG------GLIGSAL---VKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLE 71 (256)
T ss_pred CCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHH
Confidence 5789999 99999 9999999 555667787776 4888888888888866544456778899999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccC-----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFG-----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
++++++.++++++|+||||||... +..+.+.+.++..+++|+.+++.++++++|.|.+++. ++||++||..+.
T Consensus 72 ~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~ 149 (256)
T PRK09186 72 EFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGG--GNLVNISSIYGV 149 (256)
T ss_pred HHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC--ceEEEEechhhh
Confidence 999999999999999999997542 3456778899999999999999999999999987766 899999998765
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
.+.... .+. .........|++||++++++++++++++.+.||+|++++||.+. +....... .+..
T Consensus 150 ~~~~~~---~~~------~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~-----~~~~ 215 (256)
T PRK09186 150 VAPKFE---IYE------GTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLN-----AYKK 215 (256)
T ss_pred ccccch---hcc------ccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHH-----HHHh
Confidence 432100 000 00011234799999999999999999999999999999999987 54222111 0000
Q ss_pred hhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.. ....+.++++.|+ .......+|+++
T Consensus 216 ~~--~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~ 248 (256)
T PRK09186 216 CC--NGKGMLDPDDICGTLVFLLSDQSKYITGQNI 248 (256)
T ss_pred cC--CccCCCCHHHhhhhHhheeccccccccCceE
Confidence 00 1123468888887 233345567654
No 97
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.96 E-value=1.8e-29 Score=214.72 Aligned_cols=213 Identities=17% Similarity=0.182 Sum_probs=172.6
Q ss_pred CCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHHHhC-CCccE
Q psy4251 39 PRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKF-RSLNI 115 (292)
Q Consensus 39 ~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~-~~id~ 115 (292)
++++|||+++ +.+++++|+.|+. |+.+++++..+++.+..+ .+ ++++|++++++++++++++.+++ ++||+
T Consensus 3 ~~s~GiG~ai---a~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~ 76 (241)
T PF13561_consen 3 GSSSGIGRAI---ARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDI 76 (241)
T ss_dssp SSTSHHHHHH---HHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred CCCCChHHHH---HHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence 3559999999 6667788888774 889888888888887764 33 59999999999999999999999 99999
Q ss_pred EEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCcccc
Q psy4251 116 LVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVL 189 (292)
Q Consensus 116 lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~~~ 189 (292)
||||+|... +..+.+.++|+..+++|+.+++.++++++|+|+++ ++||++||..+..+.
T Consensus 77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----gsii~iss~~~~~~~----------- 141 (241)
T PF13561_consen 77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG----GSIINISSIAAQRPM----------- 141 (241)
T ss_dssp EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE----EEEEEEEEGGGTSBS-----------
T ss_pred EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CCcccccchhhcccC-----------
Confidence 999999764 23456788999999999999999999999988765 899999999776654
Q ss_pred CcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC-CCeEEEEecCCccc-cccccccccCCccchhhhhhccccc--cCC
Q psy4251 190 SVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK-YKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISRVRPV--TNF 265 (292)
Q Consensus 190 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 265 (292)
+ +...|+++|++++.|++++|.|+.+ +|||||+|.||++. ++.+..... ..+.....+..|+ ..+
T Consensus 142 -~-------~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~---~~~~~~~~~~~pl~r~~~ 210 (241)
T PF13561_consen 142 -P-------GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN---EEFLEELKKRIPLGRLGT 210 (241)
T ss_dssp -T-------TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH---HHHHHHHHHHSTTSSHBE
T ss_pred -c-------cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccc---cchhhhhhhhhccCCCcC
Confidence 2 6679999999999999999999999 99999999999999 876554311 1222222222222 358
Q ss_pred HHHhhc------ccccCCCCCccc
Q psy4251 266 QVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 266 ~~~~a~------~~~~~~~~G~~~ 283 (292)
|+|.|. ++....++|+.+
T Consensus 211 ~~evA~~v~fL~s~~a~~itG~~i 234 (241)
T PF13561_consen 211 PEEVANAVLFLASDAASYITGQVI 234 (241)
T ss_dssp HHHHHHHHHHHHSGGGTTGTSEEE
T ss_pred HHHHHHHHHHHhCccccCccCCeE
Confidence 999987 677778888855
No 98
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.96 E-value=9.9e-29 Score=212.71 Aligned_cols=182 Identities=16% Similarity=0.177 Sum_probs=150.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||+++ +.+|++.|+.|+. |+.+++++..+ .. +.++.++++|+++.+++
T Consensus 2 ~~~~k~vl-ItGas------~gIG~~i---a~~l~~~G~~V~~~~r~~~~~~~l~~----~~-~~~~~~~~~D~~~~~~~ 66 (262)
T TIGR03325 2 RLKGEVVL-VTGGA------SGLGRAI---VDRFVAEGARVAVLDKSAAGLQELEA----AH-GDAVVGVEGDVRSLDDH 66 (262)
T ss_pred CcCCcEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHh----hc-CCceEEEEeccCCHHHH
Confidence 46789999 99999 9999999 5556778877764 77766555433 22 34788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC---CCCCCCC----cchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTE----DGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~----~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
.++++++.++++++|+||||||+.. +..+.+. ++|++.+++|+.+++.++++++|.|.++ . ++||+++|.
T Consensus 67 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~--g~iv~~sS~ 143 (262)
T TIGR03325 67 KEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-R--GSVIFTISN 143 (262)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-C--CCEEEEecc
Confidence 9999999999999999999999752 2223333 4689999999999999999999999764 3 799999998
Q ss_pred ccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 173 SHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
.+..+. + +...|++||++++.|++++++++.+. |+||+|+||++. ++..
T Consensus 144 ~~~~~~------------~-------~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~ 193 (262)
T TIGR03325 144 AGFYPN------------G-------GGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRG 193 (262)
T ss_pred ceecCC------------C-------CCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcc
Confidence 776543 2 56789999999999999999999886 999999999999 8764
No 99
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.96 E-value=2.3e-28 Score=209.73 Aligned_cols=230 Identities=19% Similarity=0.228 Sum_probs=178.2
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +..++..|+.|+ .|+.+++++..+++... +.++.++.+|+++.++
T Consensus 5 ~~~~~k~il-ItGas------g~IG~~~---a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~ 72 (258)
T PRK06949 5 INLEGKVAL-VTGAS------SGLGARF---AQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQS 72 (258)
T ss_pred cCCCCCEEE-EECCC------cHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHH
Confidence 457899999 99999 9999999 555556776665 48888888888877655 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC------CCcEEEEEc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK------LFARVVVVS 170 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~------~~~~iV~vs 170 (292)
+.++++++.+.++++|++|||||... +..+.+.++++.++++|+.+++.++++++|.+.++.. ..++||++|
T Consensus 73 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~s 152 (258)
T PRK06949 73 IKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIA 152 (258)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEEC
Confidence 99999999999999999999999753 3455677889999999999999999999999875531 027999999
Q ss_pred CcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCc
Q psy4251 171 SESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTP 249 (292)
Q Consensus 171 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~ 249 (292)
|..+..+. + ....|+++|+++..++++++.++.++||+|++|+||+|+ ++....+.....
T Consensus 153 S~~~~~~~------------~-------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~ 213 (258)
T PRK06949 153 SVAGLRVL------------P-------QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQG 213 (258)
T ss_pred cccccCCC------------C-------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHH
Confidence 98765443 2 567899999999999999999999889999999999999 886643321100
Q ss_pred cchhhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 250 VRTFSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
..+...+ ....+..|++.++ .+.....+|..+
T Consensus 214 ~~~~~~~--~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i 251 (258)
T PRK06949 214 QKLVSML--PRKRVGKPEDLDGLLLLLAADESQFINGAII 251 (258)
T ss_pred HHHHhcC--CCCCCcCHHHHHHHHHHHhChhhcCCCCcEE
Confidence 1111111 1123567888776 444556677654
No 100
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.96 E-value=6.8e-29 Score=212.70 Aligned_cols=202 Identities=12% Similarity=0.058 Sum_probs=161.6
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC-cEEE--EcCHHH-HHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS-KLFY--QNCWDK-ANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g-~~v~--~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
-++++++ ||||+ +|||+++ +.+++++| ..|+ .|+.++ ++++.+++.... +.++.++++|++|.++
T Consensus 6 ~~~~~vl-ItGas------~giG~~l---a~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~ 74 (253)
T PRK07904 6 GNPQTIL-LLGGT------SEIGLAI---CERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDS 74 (253)
T ss_pred CCCcEEE-EEcCC------cHHHHHH---HHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHH
Confidence 3578888 99999 9999999 55555653 5554 588775 888888887652 3478999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCC--CCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFS--HTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+ .+++|++|+|+|...+..+ .+.+..++++++|+.+++.+++.++|.|.+++. ++||++||..+..
T Consensus 75 ~~~~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~--~~iv~isS~~g~~ 151 (253)
T PRK07904 75 HPKVIDAAFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF--GQIIAMSSVAGER 151 (253)
T ss_pred HHHHHHHHHh-cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC--ceEEEEechhhcC
Confidence 9999999886 4899999999998743221 123345578999999999999999999998877 9999999987654
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
+. + +...|++||+++..|+++++.++.++||+|++|+||+++ ++......
T Consensus 152 ~~------------~-------~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~---------- 202 (253)
T PRK07904 152 VR------------R-------SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE---------- 202 (253)
T ss_pred CC------------C-------CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC----------
Confidence 33 2 456799999999999999999999999999999999999 87765321
Q ss_pred hhccccccCCHHHhhc
Q psy4251 256 ISRVRPVTNFQVDLTG 271 (292)
Q Consensus 256 ~~~~~~~~~~~~~~a~ 271 (292)
.+...++++.|+
T Consensus 203 ----~~~~~~~~~~A~ 214 (253)
T PRK07904 203 ----APLTVDKEDVAK 214 (253)
T ss_pred ----CCCCCCHHHHHH
Confidence 122458888887
No 101
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.96 E-value=2.3e-28 Score=208.55 Aligned_cols=227 Identities=16% Similarity=0.113 Sum_probs=178.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++|+++ ||||+ +|||.++ +..+.++|+.|+ .|+.+++++..+++... +.++.++++|+++.+++
T Consensus 4 ~~~~~~vl-ItGa~------g~iG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~ 71 (250)
T PRK12939 4 NLAGKRAL-VTGAA------RGLGAAF---AEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASV 71 (250)
T ss_pred CCCCCEEE-EeCCC------ChHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHH
Confidence 46789999 99999 9999999 555666777765 48888888888887655 45799999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
+++++++.+.++++|++|||||... +..+.+.++++.++++|+.+++.+++.+.|.+.+++. ++||++||..+..+
T Consensus 72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~isS~~~~~~ 149 (250)
T PRK12939 72 QRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGR--GRIVNLASDTALWG 149 (250)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--eEEEEECchhhccC
Confidence 9999999999999999999999863 3456678899999999999999999999999987666 89999999877655
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhh
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWI 256 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~ 256 (292)
. + ....|+++|++++.+++.++.++...+|++++|+||.++ ++.+..........+....
T Consensus 150 ~------------~-------~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~ 210 (250)
T PRK12939 150 A------------P-------KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGR 210 (250)
T ss_pred C------------C-------CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcC
Confidence 4 2 456899999999999999999998889999999999999 8775532210111111111
Q ss_pred hccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 257 SRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 257 ~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
..+...++++.|+ .......+|+.+
T Consensus 211 --~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i 241 (250)
T PRK12939 211 --ALERLQVPDDVAGAVLFLLSDAARFVTGQLL 241 (250)
T ss_pred --CCCCCCCHHHHHHHHHHHhCccccCccCcEE
Confidence 2223567888877 233345567654
No 102
>PRK06484 short chain dehydrogenase; Validated
Probab=99.96 E-value=1.3e-28 Score=231.66 Aligned_cols=185 Identities=16% Similarity=0.256 Sum_probs=159.7
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
++||+++ |||++ +|||+++ +..|+++|+.|+ .|+.+++++..+++ +.++.++++|++++++++
T Consensus 3 ~~~k~~l-ITGas------~gIG~ai---a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~ 67 (520)
T PRK06484 3 AQSRVVL-VTGAA------GGIGRAA---CQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIR 67 (520)
T ss_pred CCCeEEE-EECCC------cHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHH
Confidence 4688998 99999 9999999 556677787776 48888777766655 346788999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCc-EEEEEcCcccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFA-RVVVVSSESHR 175 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~-~iV~vsS~~~~ 175 (292)
++++++.++++++|+||||||+.. +..+.+.++|++++++|+.+++.++++++|+|.+++. + +||++||..+.
T Consensus 68 ~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~~iv~isS~~~~ 145 (520)
T PRK06484 68 EGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH--GAAIVNVASGAGL 145 (520)
T ss_pred HHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CCeEEEECCcccC
Confidence 999999999999999999999842 3456788999999999999999999999999977554 5 99999998877
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
.+. + ....|+++|+++..|+++++.|+.+.||+|++|+||+|+ ++....
T Consensus 146 ~~~------------~-------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~ 195 (520)
T PRK06484 146 VAL------------P-------KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAEL 195 (520)
T ss_pred CCC------------C-------CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhh
Confidence 654 2 567899999999999999999999999999999999999 876543
No 103
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.96 E-value=2.4e-28 Score=208.00 Aligned_cols=185 Identities=17% Similarity=0.159 Sum_probs=157.6
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++++|+++ ||||+ +|||+.+ +..+.++|+.++. ++....++..+++.+. +.++.++++|+++.++
T Consensus 2 ~~~~~~vl-ItG~~------~~iG~~l---a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~ 69 (245)
T PRK12937 2 TLSNKVAI-VTGAS------RGIGAAI---ARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAA 69 (245)
T ss_pred CCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHH
Confidence 57789999 99999 9999999 5556677877653 3455667777777654 5689999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.++++++|++|||||... +..+.+.+++++++++|+.+++.++++++|.|.+ . ++||++||..+..
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~--~~iv~~ss~~~~~ 145 (245)
T PRK12937 70 VTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--G--GRIINLSTSVIAL 145 (245)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--C--cEEEEEeeccccC
Confidence 99999999999999999999999863 3456678889999999999999999999999864 3 8999999986655
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+. + +...|+.+|++++.++++++.++.+.||+++.++||+++ ++..
T Consensus 146 ~~------------~-------~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~ 192 (245)
T PRK12937 146 PL------------P-------GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF 192 (245)
T ss_pred CC------------C-------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc
Confidence 43 2 567899999999999999999999889999999999999 8753
No 104
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.96 E-value=4e-28 Score=209.88 Aligned_cols=185 Identities=14% Similarity=0.138 Sum_probs=162.0
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
++++ ||||+ +|||+++ +.+|++.|..|+ .|+.+++++..+++.+. +.++.++++|+++++++.+++
T Consensus 1 ~~vl-VtGas------ggIG~~l---a~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~ 68 (270)
T PRK05650 1 NRVM-ITGAA------SGLGRAI---ALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALA 68 (270)
T ss_pred CEEE-EecCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHH
Confidence 3577 99999 9999999 555667787776 48888888888888765 567889999999999999999
Q ss_pred HHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
+++.++++++|+||||||... ...+.+.++++..+++|+.+++.+++.++|.|.+++. ++||++||..+..+.
T Consensus 69 ~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~vsS~~~~~~~--- 143 (270)
T PRK05650 69 QACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKS--GRIVNIASMAGLMQG--- 143 (270)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCC--CEEEEECChhhcCCC---
Confidence 999999999999999999864 4566788899999999999999999999999987766 899999998777654
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+ +...|+++|+++.+++++++.++.+.||++++|+||+++ ++....
T Consensus 144 ---------~-------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~ 190 (270)
T PRK05650 144 ---------P-------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSF 190 (270)
T ss_pred ---------C-------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccccc
Confidence 2 678999999999999999999999889999999999999 877654
No 105
>KOG1610|consensus
Probab=99.96 E-value=1e-28 Score=208.21 Aligned_cols=185 Identities=21% Similarity=0.190 Sum_probs=161.1
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEc--CHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQN--CWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r--~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++.+|.|+ |||+. +|+|+.+ +.+|.+.|+.|+.. +++.+++...+.+ +.+...+++|++++++
T Consensus 25 ~~~~~k~Vl-ITGCD------SGfG~~L---A~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~es 90 (322)
T KOG1610|consen 25 DSLSDKAVL-ITGCD------SGFGRLL---AKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPES 90 (322)
T ss_pred cccCCcEEE-EecCC------cHHHHHH---HHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHH
Confidence 556677777 99999 9999999 77788999999864 4555555555443 4688889999999999
Q ss_pred HHHHHHHHHHhCC--CccEEEEccccc---CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 99 VKKFAEEYQKKFR--SLNILVLNAGVF---GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 99 v~~~~~~~~~~~~--~id~lI~nAg~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
|+++.+.++++.+ .+-.||||||+. ++.+-.+.+++++.++||++|++.++++++|++++++ ||||+|||..
T Consensus 91 i~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar---GRvVnvsS~~ 167 (322)
T KOG1610|consen 91 VKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR---GRVVNVSSVL 167 (322)
T ss_pred HHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc---CeEEEecccc
Confidence 9999999998764 599999999976 3556678999999999999999999999999998876 8999999999
Q ss_pred cccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 174 HRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
++.+. + ....|++||+|++.|+.++.+|+.+.||.|..|.||+.+ ++..
T Consensus 168 GR~~~------------p-------~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 168 GRVAL------------P-------ALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred cCccC------------c-------ccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 98876 3 678899999999999999999999999999999999998 8876
No 106
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.96 E-value=8.6e-28 Score=205.40 Aligned_cols=188 Identities=15% Similarity=0.097 Sum_probs=162.0
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||.++ +..|++.|+.|+ .|+.+..++..+++. . +.++.++++|++|++++
T Consensus 2 ~~~~k~~l-ItG~s------g~iG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~ 68 (252)
T PRK06138 2 RLAGRVAI-VTGAG------SGIGRAT---AKLFAREGARVVVADRDAEAAERVAAAIA-A--GGRAFARQGDVGSAEAV 68 (252)
T ss_pred CCCCcEEE-EeCCC------chHHHHH---HHHHHHCCCeEEEecCCHHHHHHHHHHHh-c--CCeEEEEEcCCCCHHHH
Confidence 57899999 99999 9999999 555556776665 488887777777665 2 56789999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
+++++++.++++++|+||||||... +..+.+.++++.++++|+.+++.+++.++|.|++++. ++||++||..+..+
T Consensus 69 ~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~ii~~sS~~~~~~ 146 (252)
T PRK06138 69 EALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGG--GSIVNTASQLALAG 146 (252)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC--eEEEEECChhhccC
Confidence 9999999999999999999999863 3456788899999999999999999999999987776 89999999877655
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
. + +...|+.+|+++..++++++.++...||++++++||.+. ++.+..
T Consensus 147 ~------------~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~ 194 (252)
T PRK06138 147 G------------R-------GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRI 194 (252)
T ss_pred C------------C-------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhh
Confidence 4 2 567899999999999999999998889999999999999 776543
No 107
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.96 E-value=3.6e-28 Score=207.26 Aligned_cols=214 Identities=18% Similarity=0.182 Sum_probs=171.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++++|+++ ||||+ +|||.++ +.+++++|..|++ |+.+..++..+++.+. +.++.++++|++++++
T Consensus 3 ~~~~~~~l-ItG~s------~~iG~~l---a~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~ 70 (247)
T PRK12935 3 QLNGKVAI-VTGGA------KGIGKAI---TVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVED 70 (247)
T ss_pred CCCCCEEE-EECCC------CHHHHHH---HHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHH
Confidence 46789999 99999 9999999 5556677877764 4566666766777654 4579999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCC--CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGL--GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+.++++|+||||||.... ..+.+.++++..+++|+.+++.++++++|.+.++.. ++||++||..+..
T Consensus 71 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~~ 148 (247)
T PRK12935 71 ANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEE--GRIISISSIIGQA 148 (247)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--cEEEEEcchhhcC
Confidence 999999999999999999999998642 345677899999999999999999999999987766 8999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
+. + +...|+++|+++++++++++.++.+.||+++.++||.++ ++....+.. ........
T Consensus 149 ~~------------~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~ 208 (247)
T PRK12935 149 GG------------F-------GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEE-VRQKIVAK 208 (247)
T ss_pred CC------------C-------CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHH-HHHHHHHh
Confidence 43 2 567899999999999999999998889999999999999 776543221 11111122
Q ss_pred hhccccccCCHHHhhc
Q psy4251 256 ISRVRPVTNFQVDLTG 271 (292)
Q Consensus 256 ~~~~~~~~~~~~~~a~ 271 (292)
. ...-...+++.++
T Consensus 209 ~--~~~~~~~~edva~ 222 (247)
T PRK12935 209 I--PKKRFGQADEIAK 222 (247)
T ss_pred C--CCCCCcCHHHHHH
Confidence 2 2233568888877
No 108
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.96 E-value=5.2e-28 Score=206.54 Aligned_cols=188 Identities=20% Similarity=0.190 Sum_probs=161.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++++++ ||||+ +|||.++ +..|.+.|+.|+ .|+.++.++...++.. +.++.++++|++|.+++
T Consensus 2 ~~~~~~vl-ItGas------g~iG~~l---~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~ 68 (251)
T PRK07231 2 RLEGKVAI-VTGAS------SGIGEGI---ARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADV 68 (251)
T ss_pred CcCCcEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHH
Confidence 46788999 99999 9999999 555666676665 5888888777776654 35789999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+++++++.++++++|+||||||... +..+.+.++++..+++|+.+++.+++.+++.+.++.. ++||++||..+..
T Consensus 69 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~~ 146 (251)
T PRK07231 69 EAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGG--GAIVNVASTAGLR 146 (251)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--cEEEEEcChhhcC
Confidence 9999999988999999999999753 3456788999999999999999999999999987766 8999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+. + +...|+.+|+++..+++.++.++.+.||++++++||++. ++.+..
T Consensus 147 ~~------------~-------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~ 195 (251)
T PRK07231 147 PR------------P-------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAF 195 (251)
T ss_pred CC------------C-------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhh
Confidence 54 2 677899999999999999999998889999999999999 876654
No 109
>KOG1207|consensus
Probab=99.96 E-value=1.1e-29 Score=195.70 Aligned_cols=186 Identities=22% Similarity=0.200 Sum_probs=156.8
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+|.|+.++ +||+. .|||+++ ++.|+..|+.|+. |+++.+.++..+. | .-+.-++.|+++.+.
T Consensus 3 t~laG~~vl-vTgag------aGIG~~~---v~~La~aGA~ViAvaR~~a~L~sLV~e~----p-~~I~Pi~~Dls~wea 67 (245)
T KOG1207|consen 3 TSLAGVIVL-VTGAG------AGIGKEI---VLSLAKAGAQVIAVARNEANLLSLVKET----P-SLIIPIVGDLSAWEA 67 (245)
T ss_pred ccccceEEE-eeccc------ccccHHH---HHHHHhcCCEEEEEecCHHHHHHHHhhC----C-cceeeeEecccHHHH
Confidence 357899999 99999 9999999 8889999999984 8888877766543 2 358889999999777
Q ss_pred HHHHHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHh-cCCCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIK-GAKLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~-~~~~~~~iV~vsS~~~~ 175 (292)
+++.+.. .+++|.+|||||+. .++.+++.+.|+.+|++|+.+.+++++....-+.. +-+ |.||++||.++.
T Consensus 68 ~~~~l~~----v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~--GaIVNvSSqas~ 141 (245)
T KOG1207|consen 68 LFKLLVP----VFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIK--GAIVNVSSQASI 141 (245)
T ss_pred HHHhhcc----cCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCC--ceEEEecchhcc
Confidence 7666444 36899999999986 57889999999999999999999999885544432 235 899999999877
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRF 246 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~ 246 (292)
.+. .....|+++|+|+.++++++|.|+.+++||||+|+|-.|. .|.+..|.+
T Consensus 142 R~~-------------------~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSD 194 (245)
T KOG1207|consen 142 RPL-------------------DNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSD 194 (245)
T ss_pred ccc-------------------CCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCC
Confidence 654 2688999999999999999999999999999999999999 998876654
No 110
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.96 E-value=5.4e-28 Score=208.41 Aligned_cols=183 Identities=14% Similarity=0.140 Sum_probs=156.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++++|+++ ||||+ +|||.++ +.+++..|+.|+ .|+.+.+++..+++... +.++.++++|+++.++
T Consensus 5 ~~~~~k~il-ItGas------ggIG~~l---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~ 72 (264)
T PRK07576 5 FDFAGKNVV-VVGGT------SGINLGI---AQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAA 72 (264)
T ss_pred ccCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHH
Confidence 357899999 99999 9999999 555667787765 48888877777777655 3467889999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+.++++|++|||||... +..+.+.++++..+++|+.+++.++++++|.|.++ . ++||++||..+..
T Consensus 73 i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~--g~iv~iss~~~~~ 149 (264)
T PRK07576 73 VEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-G--ASIIQISAPQAFV 149 (264)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-C--CEEEEECChhhcc
Confidence 99999999999999999999998652 44567788999999999999999999999998754 3 8999999987655
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
+. + +...|+++|++++.|+++++.++...||+|++|+||.++
T Consensus 150 ~~------------~-------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~ 191 (264)
T PRK07576 150 PM------------P-------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIA 191 (264)
T ss_pred CC------------C-------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 43 2 677899999999999999999999889999999999986
No 111
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.96 E-value=5.8e-28 Score=210.92 Aligned_cols=188 Identities=18% Similarity=0.143 Sum_probs=156.9
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCH-HHHHHHHHHHHhhCCCCceEEEEccCCCh
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCW-DKANDAISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
..+++||+++ ||||+ +|||.++ +.+++++|+.|+. |+. +..+...+.+... +.++.++++|+++.
T Consensus 41 ~~~~~~k~iL-ItGas------ggIG~~l---a~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~ 108 (290)
T PRK06701 41 SGKLKGKVAL-ITGGD------SGIGRAV---AVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDE 108 (290)
T ss_pred ccCCCCCEEE-EeCCC------cHHHHHH---HHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCH
Confidence 3578899999 99999 9999999 5556677777653 553 3444555555433 45788999999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
++++++++++.+.++++|+||||||... +..+.+.++|+.++++|+.+++.+++++++.|++ . ++||++||.+
T Consensus 109 ~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~--g~iV~isS~~ 184 (290)
T PRK06701 109 AFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--G--SAIINTGSIT 184 (290)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--C--CeEEEEeccc
Confidence 9999999999999999999999999753 3456788899999999999999999999999853 3 8999999987
Q ss_pred cccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 174 HRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+..+. + ....|+++|+++..++++++.++.++||+|++|+||++. ++...
T Consensus 185 ~~~~~------------~-------~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~ 235 (290)
T PRK06701 185 GYEGN------------E-------TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS 235 (290)
T ss_pred ccCCC------------C-------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence 76554 2 456899999999999999999999899999999999999 87654
No 112
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.96 E-value=8.8e-28 Score=203.98 Aligned_cols=219 Identities=17% Similarity=0.127 Sum_probs=173.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCC--h
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCR--L 96 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~--~ 96 (292)
++++||+++ ||||+ +|||+++++ .++++|+.|+ .|+.+++++..+++.+.. +..+.++++|+++ .
T Consensus 2 ~~l~~k~vl-ItG~s------ggiG~~la~---~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~ 70 (239)
T PRK08703 2 ATLSDKTIL-VTGAS------QGLGEQVAK---AYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEE 70 (239)
T ss_pred CCCCCCEEE-EECCC------CcHHHHHHH---HHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccch
Confidence 457899999 99999 999999955 4556677765 488888888888876542 3467788999986 5
Q ss_pred HHHHHHHHHHHHhC-CCccEEEEccccc---CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 97 KSVKKFAEEYQKKF-RSLNILVLNAGVF---GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 97 ~~v~~~~~~~~~~~-~~id~lI~nAg~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
+++.++++++.+.+ +++|++|||||.. .+..+.+.+++++.+++|+.+++.++++++|.|.+.+. ++||+++|.
T Consensus 71 ~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--~~iv~~ss~ 148 (239)
T PRK08703 71 KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPD--ASVIFVGES 148 (239)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCC--CEEEEEecc
Confidence 68899999999888 7899999999975 34567788899999999999999999999999987766 899999998
Q ss_pred ccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCC-CeEEEEecCCccc-cccccccccCCcc
Q psy4251 173 SHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKY-KIALSSRHCCWKI-TVSKKWWRFGTPV 250 (292)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~-gi~v~~v~PG~v~-~~~~~~~~~~~~~ 250 (292)
.+..+. + ....|++||++++.++++++.++... +|+|++|+||+|. ++..........
T Consensus 149 ~~~~~~------------~-------~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~- 208 (239)
T PRK08703 149 HGETPK------------A-------YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAK- 208 (239)
T ss_pred ccccCC------------C-------CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCCc-
Confidence 766543 2 56789999999999999999999876 6999999999999 876543221000
Q ss_pred chhhhhhccccccCCHHHhhc------ccccCCCCCcc
Q psy4251 251 RTFSWISRVRPVTNFQVDLTG------TAEKVGLSGLP 282 (292)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~ 282 (292)
.-..++++.+. .+.....+|+.
T Consensus 209 ----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 236 (239)
T PRK08703 209 ----------SERKSYGDVLPAFVWWASAESKGRSGEI 236 (239)
T ss_pred ----------cccCCHHHHHHHHHHHhCccccCcCCeE
Confidence 01246666664 45566777764
No 113
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.96 E-value=8.3e-28 Score=206.55 Aligned_cols=194 Identities=19% Similarity=0.232 Sum_probs=161.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||..+++ .|++.|+.|+ .|+.++++...+++... +.++.+++||++|.++
T Consensus 8 ~~~~~k~il-ItGa~------g~IG~~la~---~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~ 75 (259)
T PRK08213 8 FDLSGKTAL-VTGGS------RGLGLQIAE---ALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEAD 75 (259)
T ss_pred hCcCCCEEE-EECCC------chHHHHHHH---HHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHH
Confidence 346789999 99999 999999944 4556776765 48888888777777654 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHH-HHhcCCCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENA-LIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~-l~~~~~~~~~iV~vsS~~~~ 175 (292)
++++++++.+.++++|++|||||.. .+..+.+.++|++.+++|+.+++.+++++.++ +.+++. ++||++||..+.
T Consensus 76 i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~--~~~v~~sS~~~~ 153 (259)
T PRK08213 76 IERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGY--GRIINVASVAGL 153 (259)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCC--eEEEEECChhhc
Confidence 9999999999889999999999975 24456677899999999999999999999998 766656 899999998766
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
.+.. ....+...|+++|++++.+++++++++.+.||+++.|+||+++ ++.+..
T Consensus 154 ~~~~---------------~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~ 207 (259)
T PRK08213 154 GGNP---------------PEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT 207 (259)
T ss_pred cCCC---------------ccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh
Confidence 5431 1112457899999999999999999999889999999999999 776543
No 114
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.96 E-value=8.1e-28 Score=206.45 Aligned_cols=187 Identities=14% Similarity=0.152 Sum_probs=156.8
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +..|+++|+.|+ .|+.++. +..+++.+. +.++.++++|+++.++
T Consensus 3 ~~l~~~~il-ItGas------ggiG~~l---a~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~ 69 (258)
T PRK08628 3 LNLKDKVVI-VTGGA------SGIGAAI---SLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQ 69 (258)
T ss_pred CCcCCCEEE-EeCCC------ChHHHHH---HHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHH
Confidence 468899999 99999 9999999 555666776655 4776665 666777655 4578999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCC-CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGL-GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
+.++++++.+.++++|+||||||.... ..+.+.++|+..+++|+.+++.+++.++|.++++ . ++||++||..+..+
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~--~~iv~~ss~~~~~~ 146 (258)
T PRK08628 70 CRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-R--GAIVNISSKTALTG 146 (258)
T ss_pred HHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-C--cEEEEECCHHhccC
Confidence 999999999999999999999997532 2233348899999999999999999999988754 3 89999999877755
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
. + +...|+.||++++.++++++.++.++||++++|+||.+. ++.+.
T Consensus 147 ~------------~-------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~ 193 (258)
T PRK08628 147 Q------------G-------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN 193 (258)
T ss_pred C------------C-------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH
Confidence 4 2 567899999999999999999998889999999999999 87543
No 115
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.96 E-value=8.4e-28 Score=207.08 Aligned_cols=187 Identities=16% Similarity=0.146 Sum_probs=160.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++|++++ ||||+ +|||++++++ |..+|+.|+ .|+.+++++..+++... +.++.++++|+++++++
T Consensus 7 ~~~~~~vl-ItGas------ggIG~~~a~~---l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~ 74 (263)
T PRK07814 7 RLDDQVAV-VTGAG------RGLGAAIALA---FAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEAT 74 (263)
T ss_pred cCCCCEEE-EECCC------ChHHHHHHHH---HHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHH
Confidence 47899999 99999 9999999554 556777765 48888888888877654 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHh-cCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIK-GAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~-~~~~~~~iV~vsS~~~~~ 176 (292)
.++++++.+.++++|+||||||... +..+.+.++++.++++|+.+++.+++++.|.|.+ +.. ++||++||..+..
T Consensus 75 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--g~iv~~sS~~~~~ 152 (263)
T PRK07814 75 AGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGG--GSVINISSTMGRL 152 (263)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCC--eEEEEEccccccC
Confidence 9999999999999999999999753 3456788899999999999999999999999976 455 8999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + +...|+++|++++.++++++.++.+ +|++|+|+||++. ++...
T Consensus 153 ~~------------~-------~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~ 199 (263)
T PRK07814 153 AG------------R-------GFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEV 199 (263)
T ss_pred CC------------C-------CCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhh
Confidence 43 2 6778999999999999999999987 6999999999999 76543
No 116
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.96 E-value=8.1e-28 Score=205.20 Aligned_cols=226 Identities=13% Similarity=0.036 Sum_probs=170.3
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
|+++ ||||+ +|||.++ +..|++.|+.|+. |+.+++++..+++... +.++.+++||+++.+++.++
T Consensus 3 k~il-ItGas------~giG~~l---a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~ 70 (248)
T PRK06947 3 KVVL-ITGAS------RGIGRAT---AVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAM 70 (248)
T ss_pred cEEE-EeCCC------CcHHHHH---HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHH
Confidence 5677 99999 9999999 5556677776642 6777777777777654 45799999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC-CCcEEEEEcCccccccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK-LFARVVVVSSESHRYSY 178 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~-~~~~iV~vsS~~~~~~~ 178 (292)
++++.+.++++|+||||||... +..+.+.++++..+++|+.+++.+++.+++.+..++. +.++||++||..+..+.
T Consensus 71 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~ 150 (248)
T PRK06947 71 FDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS 150 (248)
T ss_pred HHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC
Confidence 9999988999999999999863 3456678899999999999999999999998865431 11789999998776553
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhh
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWIS 257 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~ 257 (292)
. . ....|++||+++.++++++++++.+.||+|+.++||+++ ++.................
T Consensus 151 ~-----------~-------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~- 211 (248)
T PRK06947 151 P-----------N-------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQT- 211 (248)
T ss_pred C-----------C-------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcC-
Confidence 1 1 235799999999999999999999889999999999999 8754321100000111111
Q ss_pred ccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 258 RVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 258 ~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
......++++.++ .......+|.++
T Consensus 212 -~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~ 242 (248)
T PRK06947 212 -PLGRAGEADEVAETIVWLLSDAASYVTGALL 242 (248)
T ss_pred -CCCCCcCHHHHHHHHHHHcCccccCcCCceE
Confidence 1112457888887 233345677765
No 117
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.96 E-value=3.9e-28 Score=210.75 Aligned_cols=180 Identities=16% Similarity=0.035 Sum_probs=152.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.+|+++ ||||+ +|||+++ +..+.+.|+.|+ +|+.++++++ .+. .+.++++|++|.+++++
T Consensus 3 ~~k~vl-ItGas------ggiG~~l---a~~l~~~G~~Vi~~~r~~~~~~~l----~~~----~~~~~~~Dl~d~~~~~~ 64 (277)
T PRK05993 3 MKRSIL-ITGCS------SGIGAYC---ARALQSDGWRVFATCRKEEDVAAL----EAE----GLEAFQLDYAEPESIAA 64 (277)
T ss_pred CCCEEE-EeCCC------cHHHHHH---HHHHHHCCCEEEEEECCHHHHHHH----HHC----CceEEEccCCCHHHHHH
Confidence 367888 99999 9999999 555667787776 4777665543 221 47788999999999999
Q ss_pred HHHHHHHhC-CCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 102 FAEEYQKKF-RSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 102 ~~~~~~~~~-~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
+++++.+.+ +++|+||||||+.. +..+.+.++++..+++|+.|++.+++.++|.|.+++. ++||++||..+..+.
T Consensus 65 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~--g~iv~isS~~~~~~~ 142 (277)
T PRK05993 65 LVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQ--GRIVQCSSILGLVPM 142 (277)
T ss_pred HHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCC--CEEEEECChhhcCCC
Confidence 999997765 68999999999863 4566788899999999999999999999999988777 899999998776554
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|++||++++.|+++++.|+.+.||+|++|+||+++ ++.++
T Consensus 143 ------------~-------~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~ 188 (277)
T PRK05993 143 ------------K-------YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN 188 (277)
T ss_pred ------------C-------ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence 2 567899999999999999999999999999999999999 88765
No 118
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.96 E-value=7.5e-28 Score=206.61 Aligned_cols=185 Identities=18% Similarity=0.247 Sum_probs=158.5
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.+.+|+++ ||||+ +|||+++ +..|+++|+.|+ .|+.++.++..+++ +.++.++++|++|.+++
T Consensus 3 ~l~~~~vl-ItGas------~~iG~~i---a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~ 67 (257)
T PRK07067 3 RLQGKVAL-LTGAA------SGIGEAV---AERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSI 67 (257)
T ss_pred CCCCCEEE-EeCCC------chHHHHH---HHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHH
Confidence 36789998 99999 9999999 666777887776 48887777666554 23688899999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~ 176 (292)
.++++++.++++++|++|||||... +..+.+.++++.++++|+.+++.+++++++.|.++. . ++||++||..+..
T Consensus 68 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~iv~~sS~~~~~ 145 (257)
T PRK07067 68 DRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRG--GKIINMASQAGRR 145 (257)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCC--cEEEEeCCHHhCC
Confidence 9999999999999999999999863 456678889999999999999999999999987643 4 7999999987665
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + +...|++||+++..+++++++++.++||++|+|+||++. ++.+.
T Consensus 146 ~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~ 193 (257)
T PRK07067 146 GE------------A-------LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ 193 (257)
T ss_pred CC------------C-------CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh
Confidence 54 2 567899999999999999999999999999999999999 77543
No 119
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.96 E-value=1.1e-27 Score=206.34 Aligned_cols=186 Identities=17% Similarity=0.113 Sum_probs=158.8
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++++++ ||||+ +|||+++ +..++++|+.|+ .|+.+++++...++ .. +.++.++++|++|.+++
T Consensus 2 ~~~~~~vl-ItG~s------~~iG~~i---a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~d~~~~ 68 (263)
T PRK09072 2 DLKDKRVL-LTGAS------GGIGQAL---AEALAAAGARLLLVGRNAEKLEALAARL-PY--PGRHRWVVADLTSEAGR 68 (263)
T ss_pred CCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHH-hc--CCceEEEEccCCCHHHH
Confidence 46788888 99999 9999999 555566777765 48888888877777 22 45889999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++.+.+ ++++|++|||||... +..+.+.++++.++++|+.|++.+++.++|++.+++. ++||++||..+..+
T Consensus 69 ~~~~~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--~~iv~isS~~~~~~ 145 (263)
T PRK09072 69 EAVLARARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPS--AMVVNVGSTFGSIG 145 (263)
T ss_pred HHHHHHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CEEEEecChhhCcC
Confidence 999999876 789999999999863 4566788899999999999999999999999987766 89999999877655
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
. + +...|+.+|+++..++++++.++.+.||+|++|+||+++ ++...
T Consensus 146 ~------------~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~ 192 (263)
T PRK09072 146 Y------------P-------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE 192 (263)
T ss_pred C------------C-------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh
Confidence 4 2 567899999999999999999999999999999999999 77543
No 120
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.96 E-value=1.5e-27 Score=204.28 Aligned_cols=184 Identities=17% Similarity=0.163 Sum_probs=158.6
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|+++ |||++ +|||+++ +..|.+.|+.|+ .|+.+.+++..+++... +.++.++.+|++|++++.+++
T Consensus 1 k~~l-ItG~s------g~iG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~ 68 (254)
T TIGR02415 1 KVAL-VTGGA------QGIGKGI---AERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAI 68 (254)
T ss_pred CEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHH
Confidence 5677 99999 9999999 555667777765 48888888887777654 557899999999999999999
Q ss_pred HHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccccccCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~~~~ 180 (292)
+++.+.++++|+||||||... +..+.+.+++++++++|+.+++.+++.+++.|.+.+ . ++||++||..+..+.
T Consensus 69 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~-- 144 (254)
T TIGR02415 69 DQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG--GKIINAASIAGHEGN-- 144 (254)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC--eEEEEecchhhcCCC--
Confidence 999999999999999999863 456778899999999999999999999999998754 4 799999998776654
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ ....|+.+|++++.+++.+++++.+.||+|++|+||+++ ++.+.
T Consensus 145 ----------~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~ 190 (254)
T TIGR02415 145 ----------P-------ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE 190 (254)
T ss_pred ----------C-------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh
Confidence 2 577899999999999999999999889999999999999 77654
No 121
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.96 E-value=1.1e-27 Score=205.09 Aligned_cols=218 Identities=14% Similarity=0.100 Sum_probs=168.2
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||+++ +..|+..|+.|+. |+.++ ... +.++.++++|+++.++
T Consensus 2 ~~~~~k~~l-ItGas------~gIG~~l---a~~l~~~g~~v~~~~r~~~~--------~~~--~~~~~~~~~D~~~~~~ 61 (252)
T PRK07856 2 LDLTGRVVL-VTGGT------RGIGAGI---ARAFLAAGATVVVCGRRAPE--------TVD--GRPAEFHAADVRDPDQ 61 (252)
T ss_pred CCCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCChhh--------hhc--CCceEEEEccCCCHHH
Confidence 357899999 99999 9999999 5556677877764 66543 111 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhc-CCCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKG-AKLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~-~~~~~~iV~vsS~~~~ 175 (292)
++++++++.+.++++|+||||||+.. +..+.+.++|++.+++|+.+++.+++.+.|.|.++ .. ++||++||..+.
T Consensus 62 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--g~ii~isS~~~~ 139 (252)
T PRK07856 62 VAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGG--GSIVNIGSVSGR 139 (252)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--cEEEEEcccccC
Confidence 99999999999999999999999763 34566788899999999999999999999999764 34 899999998776
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
.+. + ....|+++|++++.|+++++.++.+. |++|+|+||+|+ ++....... + ....
T Consensus 140 ~~~------------~-------~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~--~-~~~~ 196 (252)
T PRK07856 140 RPS------------P-------GTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGD--A-EGIA 196 (252)
T ss_pred CCC------------C-------CCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccC--H-HHHH
Confidence 654 2 56789999999999999999999887 999999999999 775442211 1 1111
Q ss_pred hhhc--cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISR--VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~--~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.+.. ......+|++.|. .+.....+|+.+
T Consensus 197 ~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i 233 (252)
T PRK07856 197 AVAATVPLGRLATPADIAWACLFLASDLASYVSGANL 233 (252)
T ss_pred HHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEE
Confidence 1101 1123467888886 344455677654
No 122
>PRK06182 short chain dehydrogenase; Validated
Probab=99.96 E-value=8.3e-28 Score=208.20 Aligned_cols=179 Identities=19% Similarity=0.126 Sum_probs=153.0
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
++|+++ |||++ +|||+++ +.++.+.|+.|+ .|+.+++++.. + ..+.++++|++|.+++++
T Consensus 2 ~~k~vl-ItGas------ggiG~~l---a~~l~~~G~~V~~~~r~~~~l~~~~----~----~~~~~~~~Dv~~~~~~~~ 63 (273)
T PRK06182 2 QKKVAL-VTGAS------SGIGKAT---ARRLAAQGYTVYGAARRVDKMEDLA----S----LGVHPLSLDVTDEASIKA 63 (273)
T ss_pred CCCEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHH----h----CCCeEEEeeCCCHHHHHH
Confidence 478888 99999 9999999 555667787776 47776654432 2 247889999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
+++++.+.++++|+||||||+.. +..+.+.++++..+++|+.+++.+++.++|.|+++.. ++||++||..+..+.
T Consensus 64 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--g~iv~isS~~~~~~~- 140 (273)
T PRK06182 64 AVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS--GRIINISSMGGKIYT- 140 (273)
T ss_pred HHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC--CEEEEEcchhhcCCC-
Confidence 99999999999999999999863 4567788999999999999999999999999988776 899999998765543
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+ ....|+++|++++.|+++++.++.+.||++++|+||+++ ++.+
T Consensus 141 -----------~-------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 185 (273)
T PRK06182 141 -----------P-------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGD 185 (273)
T ss_pred -----------C-------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccch
Confidence 2 456799999999999999999999999999999999999 8754
No 123
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.96 E-value=7.9e-28 Score=206.74 Aligned_cols=181 Identities=16% Similarity=0.155 Sum_probs=153.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||.++ +.+|++.|+.|+. |+.+.. . ..++.++++|++|.++
T Consensus 5 ~~~~~k~vl-ItGas------~gIG~~i---a~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~~~D~~~~~~ 63 (260)
T PRK06523 5 LELAGKRAL-VTGGT------KGIGAAT---VARLLEAGARVVTTARSRPDD---------L--PEGVEFVAADLTTAEG 63 (260)
T ss_pred cCCCCCEEE-EECCC------CchhHHH---HHHHHHCCCEEEEEeCChhhh---------c--CCceeEEecCCCCHHH
Confidence 468899999 99999 9999999 6666677877764 664321 1 3468889999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESH 174 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~ 174 (292)
++++++++.++++++|+||||||... +..+.+.++|++.+++|+.+++.++++++|.|.++.. ++||++||..+
T Consensus 64 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~ii~isS~~~ 141 (260)
T PRK06523 64 CAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGS--GVIIHVTSIQR 141 (260)
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--cEEEEEecccc
Confidence 99999999999999999999999642 3455788899999999999999999999999987766 89999999876
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
..+.. . +...|+++|++++.++++++.++.++||++|+|+||+|+ ++...
T Consensus 142 ~~~~~-----------~-------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~ 192 (260)
T PRK06523 142 RLPLP-----------E-------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA 192 (260)
T ss_pred cCCCC-----------C-------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH
Confidence 65421 1 457899999999999999999999999999999999999 87643
No 124
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.96 E-value=1.8e-27 Score=203.16 Aligned_cols=228 Identities=15% Similarity=0.104 Sum_probs=178.0
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
|++++++ ||||+ +|||.++ +.+|++.|+.|+ .|+.+..++..+++.+. +.++.++++|+++.++++
T Consensus 1 ~~~~~il-ItGas------~~iG~~l---a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~ 68 (250)
T TIGR03206 1 LKDKTAI-VTGGG------GGIGGAT---CRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVD 68 (250)
T ss_pred CCCCEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHH
Confidence 4688998 99999 9999999 555667787776 47888888877777654 457899999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
++++++.+.++++|++|||||... +..+.+.++++..+++|+.+++.+++.+.+.|.+.+. ++||++||..+..+.
T Consensus 69 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~ii~iss~~~~~~~ 146 (250)
T TIGR03206 69 TAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGA--GRIVNIASDAARVGS 146 (250)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--eEEEEECchhhccCC
Confidence 999999999999999999999753 3455677889999999999999999999999987766 899999998776554
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccccccc-CCccchhhhh
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRF-GTPVRTFSWI 256 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~-~~~~~~~~~~ 256 (292)
+ ....|+.+|+++..+++++++++...||+++.++||.+. ++....... ..+..+...+
T Consensus 147 ------------~-------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~ 207 (250)
T TIGR03206 147 ------------S-------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAF 207 (250)
T ss_pred ------------C-------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHH
Confidence 2 567899999999999999999998889999999999999 765543210 1111222111
Q ss_pred -hc-cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 257 -SR-VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 257 -~~-~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
.. ......++++.|+ .......+|+.+
T Consensus 208 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~ 242 (250)
T TIGR03206 208 TRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVL 242 (250)
T ss_pred HhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEE
Confidence 01 1223567888886 344555567654
No 125
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.96 E-value=2.1e-27 Score=202.12 Aligned_cols=185 Identities=17% Similarity=0.223 Sum_probs=157.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++++++ ||||+ +|||+++ +..|.++|..|+. |+.+++++..+++ +.++.++++|+++.+++
T Consensus 3 ~~~~~~vl-ItGa~------g~iG~~l---a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~ 67 (245)
T PRK12936 3 DLSGRKAL-VTGAS------GGIGEEI---ARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEV 67 (245)
T ss_pred CCCCCEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHH
Confidence 56789999 99999 9999999 5666677877764 6776766655433 34688899999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
+++++++.++++++|++|||||... +..+.+.++++..+++|+.+++.+++++.+.+.+++. ++||++||..+..+
T Consensus 68 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~~~ 145 (245)
T PRK12936 68 KALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRY--GRIINITSVVGVTG 145 (245)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCC--CEEEEECCHHhCcC
Confidence 9999999999999999999999863 3456677889999999999999999999998876666 89999999877665
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
. + ....|+.+|+++..+++.+++++...|+++++++||+++ ++.+.
T Consensus 146 ~------------~-------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~ 192 (245)
T PRK12936 146 N------------P-------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK 192 (245)
T ss_pred C------------C-------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc
Confidence 4 2 567899999999999999999998889999999999999 77654
No 126
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.96 E-value=1.6e-27 Score=204.48 Aligned_cols=186 Identities=17% Similarity=0.123 Sum_probs=159.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.+++|+++ ||||+ +|||+++ +..++++|+.|+ .|+.+++++..+++... +.++.++.+|++|.+++
T Consensus 2 ~l~~k~vl-ItGa~------~~IG~~l---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 69 (258)
T PRK07890 2 LLKGKVVV-VSGVG------PGLGRTL---AVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQC 69 (258)
T ss_pred ccCCCEEE-EECCC------CcHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHH
Confidence 35788998 99999 9999999 555667787776 48888888888777654 45789999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
..+++++.++++++|++|||||... +..+.+.++++..+++|+.+++.+++++++.|.++. ++||++||..+..
T Consensus 70 ~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~ii~~sS~~~~~ 146 (258)
T PRK07890 70 ANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG---GSIVMINSMVLRH 146 (258)
T ss_pred HHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---CEEEEEechhhcc
Confidence 9999999999999999999999753 345667899999999999999999999999987653 7999999987665
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+. + +...|+++|+++..++++++.++...||++++++||++. ++..
T Consensus 147 ~~------------~-------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~ 193 (258)
T PRK07890 147 SQ------------P-------KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLK 193 (258)
T ss_pred CC------------C-------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHH
Confidence 43 2 567899999999999999999999889999999999999 6653
No 127
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.96 E-value=2.3e-27 Score=202.37 Aligned_cols=187 Identities=16% Similarity=0.109 Sum_probs=154.0
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
+|+++ |||++ +|||.++ +.+++++|..|+. |+.++.++..+++... +.++.++++|++|.+++.+
T Consensus 2 ~~~~l-VtG~~------~~iG~~~---a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~ 69 (248)
T PRK06123 2 RKVMI-ITGAS------RGIGAAT---ALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLR 69 (248)
T ss_pred CCEEE-EECCC------chHHHHH---HHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHH
Confidence 46777 99999 9999999 5556677866653 5566677766767554 4578899999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYS 177 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~ 177 (292)
+++++.++++++|+||||||... +..+.+.++|+.++++|+.+++.+++.+++.+.++. .+.++||++||.++..+
T Consensus 70 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 149 (248)
T PRK06123 70 LFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG 149 (248)
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC
Confidence 99999999999999999999863 345667789999999999999999999999997542 11278999999877665
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
.. . ....|+++|++++++++++++++.+.||+|++++||.+. ++..
T Consensus 150 ~~-----------~-------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~ 196 (248)
T PRK06123 150 SP-----------G-------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA 196 (248)
T ss_pred CC-----------C-------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence 41 0 134699999999999999999999889999999999999 7654
No 128
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.96 E-value=1.7e-27 Score=204.64 Aligned_cols=186 Identities=19% Similarity=0.216 Sum_probs=157.3
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+|+++ ||||+ +|||.++ +..|++.|+.|+ .|+..+.++..+++....+..++.++++|+++.+++.++
T Consensus 2 ~k~il-ItG~~------~~IG~~l---a~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 71 (259)
T PRK12384 2 NQVAV-VIGGG------QTLGAFL---CHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLAL 71 (259)
T ss_pred CCEEE-EECCC------cHHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHH
Confidence 57888 99999 9999999 555666776665 488888888877776654335789999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccccccC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~~~ 179 (292)
++++.+.++++|++|||||... +..+.+.++|+..+++|+.+++++++++++.|.++. . ++||++||..+..+.
T Consensus 72 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~--~~iv~~ss~~~~~~~- 148 (259)
T PRK12384 72 SRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQ--GRIIQINSKSGKVGS- 148 (259)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCC--cEEEEecCcccccCC-
Confidence 9999999999999999999763 346678889999999999999999999999998765 5 899999998765543
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCcc-c-cccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWK-I-TVSK 241 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v-~-~~~~ 241 (292)
+ ....|++||++++.+++++++++.++||+|++|+||.+ . ++..
T Consensus 149 -----------~-------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~ 194 (259)
T PRK12384 149 -----------K-------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ 194 (259)
T ss_pred -----------C-------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh
Confidence 2 45689999999999999999999989999999999975 4 5543
No 129
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.96 E-value=4e-27 Score=199.90 Aligned_cols=189 Identities=16% Similarity=0.196 Sum_probs=162.2
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++++++++ |||++ +|||+.+ +.+|++.|+.|+ .|+.++.++..+++... +.++.++++|++++++
T Consensus 3 ~~~~~~~vl-VtG~s------g~iG~~l---~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~ 70 (239)
T PRK07666 3 QSLQGKNAL-ITGAG------RGIGRAV---AIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEE 70 (239)
T ss_pred ccCCCCEEE-EEcCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHH
Confidence 346788988 99999 9999999 555666777765 48888888888777544 4588999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.++++++|++|||||... ...+.+.+++++.+++|+.+++.+++++.|.+.++.. ++||++||..+..
T Consensus 71 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~ss~~~~~ 148 (239)
T PRK07666 71 VTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQS--GDIINISSTAGQK 148 (239)
T ss_pred HHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--cEEEEEcchhhcc
Confidence 99999999999999999999999863 3456678889999999999999999999999987766 8999999987766
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + +...|+.+|+++..+++.+++++.+.||+++.|+||.+. ++...
T Consensus 149 ~~------------~-------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~ 196 (239)
T PRK07666 149 GA------------A-------VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVD 196 (239)
T ss_pred CC------------C-------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhh
Confidence 54 2 567899999999999999999999889999999999999 76554
No 130
>PRK06194 hypothetical protein; Provisional
Probab=99.96 E-value=2e-27 Score=207.18 Aligned_cols=190 Identities=17% Similarity=0.151 Sum_probs=160.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++|+++ ||||+ +|||+++ +.+|+++|+.|+ .|+.+.+++..+++... +.++.++++|++|.+++
T Consensus 3 ~~~~k~vl-VtGas------ggIG~~l---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~ 70 (287)
T PRK06194 3 DFAGKVAV-ITGAA------SGFGLAF---ARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQV 70 (287)
T ss_pred CCCCCEEE-EeCCc------cHHHHHH---HHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHH
Confidence 46788998 99999 9999999 555667787765 48888888888877654 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCC----CcEEEEEcCcc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKL----FARVVVVSSES 173 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~----~~~iV~vsS~~ 173 (292)
+++++.+.+.++++|+||||||... +..+.+.++++..+++|+.|++.++++++|.|.++..+ .++||++||.+
T Consensus 71 ~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~ 150 (287)
T PRK06194 71 EALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA 150 (287)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChh
Confidence 9999999999999999999999864 34567888999999999999999999999999765421 16999999988
Q ss_pred cccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC--CCeEEEEecCCccc-ccccc
Q psy4251 174 HRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK--YKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~--~gi~v~~v~PG~v~-~~~~~ 242 (292)
+..+. + +...|+++|++++.++++++.++.. .+|++++++||++. ++...
T Consensus 151 ~~~~~------------~-------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~ 203 (287)
T PRK06194 151 GLLAP------------P-------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS 203 (287)
T ss_pred hccCC------------C-------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence 77654 2 5678999999999999999999863 46999999999999 77654
No 131
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.96 E-value=4.5e-27 Score=201.90 Aligned_cols=185 Identities=18% Similarity=0.146 Sum_probs=154.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
....+|+++ ||||+ +|||+.+ +..+++.|+.|+. ++.+.++++.+++... +.++.++++|++|.+
T Consensus 5 ~~~~~k~vl-ItGas------~giG~~l---a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~ 72 (258)
T PRK09134 5 SMAAPRAAL-VTGAA------RRIGRAI---ALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEA 72 (258)
T ss_pred cCCCCCEEE-EeCCC------cHHHHHH---HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHH
Confidence 445788888 99999 9999999 5556677777653 4566777777777654 457889999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
++.++++++.+.++++|+||||||... +..+.+.+++++.+++|+.+++.+++++.+.+.+... ++||+++|..+.
T Consensus 73 ~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~~s~~~~ 150 (258)
T PRK09134 73 EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADAR--GLVVNMIDQRVW 150 (258)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--ceEEEECchhhc
Confidence 999999999998999999999999863 4556788899999999999999999999999987655 899999887554
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
.+. + ....|+.||++++.+++++++++.+. |+|++++||++. ..
T Consensus 151 ~~~------------p-------~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~ 195 (258)
T PRK09134 151 NLN------------P-------DFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSG 195 (258)
T ss_pred CCC------------C-------CchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCc
Confidence 332 2 45689999999999999999999765 999999999998 54
No 132
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.96 E-value=3.8e-27 Score=203.45 Aligned_cols=182 Identities=13% Similarity=0.106 Sum_probs=143.3
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH---
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV--- 99 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v--- 99 (292)
++++ ||||+ +|||+++ +.++.+.|+.|+. |+.+++++..+++.... +.++.++++|++|.+++
T Consensus 2 ~~~l-ITGas------~gIG~~~---a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~ 70 (267)
T TIGR02685 2 PAAV-VTGAA------KRIGSSI---AVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSR 70 (267)
T ss_pred CEEE-EeCCC------CcHHHHH---HHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHH
Confidence 4677 99999 9999999 6666778888764 45677877777775443 34677899999999866
Q ss_pred -HHHHHHHHHhCCCccEEEEcccccC--CCCCCCC-----------cchhhhhhhhhhHHHHHHHHHHHHHHhcC----C
Q psy4251 100 -KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTE-----------DGFETTFQVNHLAHFYLTLQLENALIKGA----K 161 (292)
Q Consensus 100 -~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~-----------~~~~~~~~vN~~~~~~l~~~ll~~l~~~~----~ 161 (292)
+++++++.+.++++|+||||||... +..+.+. +++++.+++|+.+++.++++++|.|++.. .
T Consensus 71 ~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~ 150 (267)
T TIGR02685 71 CEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRS 150 (267)
T ss_pred HHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCC
Confidence 4555566667889999999999863 2222222 24889999999999999999999986431 0
Q ss_pred CCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 162 LFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 162 ~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
..++||+++|..+..+. + +...|++||+++++|++++++|+.+.||+|++|+||++.
T Consensus 151 ~~~~iv~~~s~~~~~~~------------~-------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~ 207 (267)
T TIGR02685 151 TNLSIVNLCDAMTDQPL------------L-------GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSL 207 (267)
T ss_pred CCeEEEEehhhhccCCC------------c-------ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCcc
Confidence 11689999998765443 2 667899999999999999999999999999999999986
No 133
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.96 E-value=1.6e-27 Score=204.65 Aligned_cols=185 Identities=15% Similarity=0.174 Sum_probs=150.6
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--Ec----CHHHHHHHHHHHHhhCCCCceEEEEccCC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QN----CWDKANDAISKILTEKPSAQCIAMELDLC 94 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r----~~~~~~~~~~~l~~~~~~~~~~~~~~Dls 94 (292)
.+++||+++ ||||+ +|||+++|+ .|+..|+.++ .+ +.+..++..+++... +.++.++++|++
T Consensus 4 ~~l~~k~vl-ItGa~------~gIG~~~a~---~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~ 71 (257)
T PRK12744 4 HSLKGKVVL-IAGGA------KNLGGLIAR---DLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLT 71 (257)
T ss_pred CCCCCcEEE-EECCC------chHHHHHHH---HHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcC
Confidence 357789999 99999 999999944 4566776633 22 345566666666554 457889999999
Q ss_pred ChHHHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEE-cC
Q psy4251 95 RLKSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVV-SS 171 (292)
Q Consensus 95 ~~~~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~v-sS 171 (292)
++++++++++++.++++++|++|||||... +..+.+.+++++++++|+.+++.++++++|.|.+. ++|+++ +|
T Consensus 72 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~----~~iv~~~ss 147 (257)
T PRK12744 72 TAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN----GKIVTLVTS 147 (257)
T ss_pred CHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC----CCEEEEecc
Confidence 999999999999999999999999999853 45567888999999999999999999999998643 677776 44
Q ss_pred cccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 172 ESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
..+... + ....|++||++++.|++++++++.++||+|++++||++. ++..
T Consensus 148 ~~~~~~-------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~ 198 (257)
T PRK12744 148 LLGAFT-------------P-------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFY 198 (257)
T ss_pred hhcccC-------------C-------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhc
Confidence 433322 2 567899999999999999999999899999999999999 7654
No 134
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.96 E-value=2.7e-27 Score=200.91 Aligned_cols=217 Identities=12% Similarity=0.063 Sum_probs=168.7
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEY 106 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~ 106 (292)
|||||+ +|||+++ +..|+++|+.|+. ++.+..++..+++++. +.++.++++|++|.+++.++++++
T Consensus 2 lItGas------~giG~~~---a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 70 (239)
T TIGR01831 2 LVTGAS------RGIGRAI---ANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEAD 70 (239)
T ss_pred EEeCCC------chHHHHH---HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHH
Confidence 499999 9999999 5556677877653 3466777777777665 457999999999999999999999
Q ss_pred HHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHH-HHHHhcCCCCcEEEEEcCcccccccCCCCC
Q psy4251 107 QKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLE-NALIKGAKLFARVVVVSSESHRYSYITKDT 183 (292)
Q Consensus 107 ~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll-~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~ 183 (292)
.+.++++|++|||||... +..+.+.++++.++++|+.+++.+++.++ |.+.+++. ++||++||.++..+.
T Consensus 71 ~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~iv~vsS~~~~~~~----- 143 (239)
T TIGR01831 71 IAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQG--GRIITLASVSGVMGN----- 143 (239)
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCC--eEEEEEcchhhccCC-----
Confidence 999999999999999864 34566788999999999999999999875 55555555 899999998877654
Q ss_pred CCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhhccccc
Q psy4251 184 ISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISRVRPV 262 (292)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (292)
+ +...|+++|+++..++++++.++..+||++++|+||+++ ++.+..... ........ ....
T Consensus 144 -------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~--~~~~ 205 (239)
T TIGR01831 144 -------R-------GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD--LDEALKTV--PMNR 205 (239)
T ss_pred -------C-------CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH--HHHHHhcC--CCCC
Confidence 2 567899999999999999999999889999999999999 887654221 11111111 1123
Q ss_pred cCCHHHhhc------ccccCCCCCcc
Q psy4251 263 TNFQVDLTG------TAEKVGLSGLP 282 (292)
Q Consensus 263 ~~~~~~~a~------~~~~~~~~G~~ 282 (292)
+.+|++.++ .+.....+|..
T Consensus 206 ~~~~~~va~~~~~l~~~~~~~~~g~~ 231 (239)
T TIGR01831 206 MGQPAEVASLAGFLMSDGASYVTRQV 231 (239)
T ss_pred CCCHHHHHHHHHHHcCchhcCccCCE
Confidence 568888887 33344555543
No 135
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.96 E-value=1e-27 Score=206.77 Aligned_cols=175 Identities=19% Similarity=0.180 Sum_probs=150.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++++|+++ ||||+ +|||+++ +..|++.|+.|+. ++.++.+ ..++.++++|+++.++
T Consensus 5 ~~l~~k~vl-ItG~s------~gIG~~l---a~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~ 63 (266)
T PRK06171 5 LNLQGKIII-VTGGS------SGIGLAI---VKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEE 63 (266)
T ss_pred ccCCCCEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHH
Confidence 357899999 99999 9999999 6667788888775 4433221 2367889999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCC-----------CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEE
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGL-----------GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVV 167 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~-----------~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV 167 (292)
++++++++.++++++|++|||||...+ ..+.+.++|++.+++|+.+++.++++++|+|.+++. ++||
T Consensus 64 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv 141 (266)
T PRK06171 64 VNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHD--GVIV 141 (266)
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCC--cEEE
Confidence 999999999999999999999997532 134678899999999999999999999999987766 8999
Q ss_pred EEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 168 VVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 168 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
++||..+..+. + +...|+++|++++.++++++.++.++||+||+|+||++.
T Consensus 142 ~isS~~~~~~~------------~-------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 142 NMSSEAGLEGS------------E-------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred EEccccccCCC------------C-------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 99998776554 2 567899999999999999999999999999999999996
No 136
>KOG1209|consensus
Probab=99.96 E-value=3.8e-28 Score=192.96 Aligned_cols=180 Identities=18% Similarity=0.162 Sum_probs=154.9
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
.|.++ |||++ .+|||.++ +.++.+.|+.|+. |+.+...++.. . ..+..+.+|+++++++.++
T Consensus 7 ~k~Vl-Itgcs-----~GGIG~al---a~ef~~~G~~V~AtaR~~e~M~~L~~----~---~gl~~~kLDV~~~~~V~~v 70 (289)
T KOG1209|consen 7 PKKVL-ITGCS-----SGGIGYAL---AKEFARNGYLVYATARRLEPMAQLAI----Q---FGLKPYKLDVSKPEEVVTV 70 (289)
T ss_pred CCeEE-EeecC-----CcchhHHH---HHHHHhCCeEEEEEccccchHhhHHH----h---hCCeeEEeccCChHHHHHH
Confidence 45666 77776 39999999 7888899999985 66555444433 2 2478899999999999999
Q ss_pred HHHHHH-hCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 103 AEEYQK-KFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 103 ~~~~~~-~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
..++++ .+|++|+|+||||.. .|..+.+.+..+++|.+|++|++.+++++...+.+. + |.||+++|.++..+.
T Consensus 71 ~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-K--GtIVnvgSl~~~vpf- 146 (289)
T KOG1209|consen 71 SGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-K--GTIVNVGSLAGVVPF- 146 (289)
T ss_pred HHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-c--ceEEEecceeEEecc-
Confidence 999998 788999999999986 577888999999999999999999999999666554 3 999999999988775
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ -...|.+||+|++.+++.|.-|+++.||+|..+.||.|. ++.++
T Consensus 147 -----------p-------f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 147 -----------P-------FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred -----------c-------hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 2 457899999999999999999999999999999999999 88776
No 137
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.96 E-value=3.7e-27 Score=202.07 Aligned_cols=185 Identities=12% Similarity=0.107 Sum_probs=154.1
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.++||+++ ||||+ +|||+++ +.+++++|+.|+ .|+.++.++..+++. ..++++|+++++++
T Consensus 4 ~~~~~~vl-ItGas------ggIG~~~---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~D~~~~~~~ 66 (255)
T PRK06057 4 RLAGRVAV-ITGGG------SGIGLAT---ARRLAAEGATVVVGDIDPEAGKAAADEVG-------GLFVPTDVTDEDAV 66 (255)
T ss_pred cCCCCEEE-EECCC------chHHHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHcC-------CcEEEeeCCCHHHH
Confidence 37899999 99999 9999999 556667787765 477776665554431 25789999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+++++++.+.++++|++|||||... +..+.+.++++..+++|+.+++++++.++|.|.++.. ++||++||..+.
T Consensus 67 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--g~iv~~sS~~~~ 144 (255)
T PRK06057 67 NALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGK--GSIINTASFVAV 144 (255)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCC--cEEEEEcchhhc
Confidence 9999999998899999999999753 2345677889999999999999999999999987666 899999998665
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
.+.. . +...|+.+|+++..++++++.++..+||+|++|+||+++ ++....
T Consensus 145 ~g~~-----------~-------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~ 195 (255)
T PRK06057 145 MGSA-----------T-------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL 195 (255)
T ss_pred cCCC-----------C-------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh
Confidence 5431 1 456799999999999999999999889999999999999 876543
No 138
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.96 E-value=5e-27 Score=203.21 Aligned_cols=185 Identities=15% Similarity=0.132 Sum_probs=155.9
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|+++ ||||+ +|||+++ +..+++.|+.|+ .|+.+.+++..+++.... +..+.++++|+++++++.+++
T Consensus 1 k~vl-ItGas------~giG~~l---a~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~ 69 (272)
T PRK07832 1 KRCF-VTGAA------SGIGRAT---ALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFA 69 (272)
T ss_pred CEEE-EeCCC------CHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHH
Confidence 4677 99999 9999999 455566776665 488888888888886542 334566899999999999999
Q ss_pred HHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccccccCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~~~~ 180 (292)
+++.+.++++|+||||||.. .+..+.+.++++..+++|+.+++.++++++|.|.+++ . ++||++||..+..+.
T Consensus 70 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~--g~ii~isS~~~~~~~-- 145 (272)
T PRK07832 70 ADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRG--GHLVNVSSAAGLVAL-- 145 (272)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC--cEEEEEccccccCCC--
Confidence 99999999999999999975 3456778899999999999999999999999997643 4 899999998765443
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ ....|+++|+++.+|+++++.++.+.||+|+.|+||.++ ++.+.
T Consensus 146 ----------~-------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~ 191 (272)
T PRK07832 146 ----------P-------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNT 191 (272)
T ss_pred ----------C-------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhc
Confidence 2 566899999999999999999999889999999999999 87654
No 139
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.96 E-value=4.6e-27 Score=202.05 Aligned_cols=182 Identities=14% Similarity=0.085 Sum_probs=156.6
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|+++ ||||+ +|||+++ +..+++.|+.|+ .|+.+++++..+++. +.++.++++|+++.+++.+++
T Consensus 2 k~vl-ItGas------g~iG~~l---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~ 67 (260)
T PRK08267 2 KSIF-ITGAA------SGIGRAT---ALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAAL 67 (260)
T ss_pred cEEE-EeCCC------chHHHHH---HHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHH
Confidence 5677 99999 9999999 555667787776 488887777666543 457899999999999999999
Q ss_pred HHHHHh-CCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 104 EEYQKK-FRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 104 ~~~~~~-~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
+.+.++ .+++|+||||||... ...+.+.++++.++++|+.+++.+++++.+.|++++. ++||++||..+..+.
T Consensus 68 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~isS~~~~~~~-- 143 (260)
T PRK08267 68 ADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPG--ARVINTSSASAIYGQ-- 143 (260)
T ss_pred HHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--CEEEEeCchhhCcCC--
Confidence 998876 789999999999864 3456678899999999999999999999999988777 999999998777654
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ ....|+.||+++++++++++.++.+.||++++|+||+++ ++.+.
T Consensus 144 ----------~-------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~ 189 (260)
T PRK08267 144 ----------P-------GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG 189 (260)
T ss_pred ----------C-------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence 2 567899999999999999999999889999999999999 87664
No 140
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.96 E-value=7.1e-27 Score=202.62 Aligned_cols=190 Identities=17% Similarity=0.066 Sum_probs=161.4
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++|+++ |||++ +|||.++ +..|.++|+.|+ .|+.++.++..+++.....+.++.++++|++|++++
T Consensus 4 ~~~~k~vl-ItGas------g~IG~~l---a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~ 73 (276)
T PRK05875 4 SFQDRTYL-VTGGG------SGIGKGV---AAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQV 73 (276)
T ss_pred CCCCCEEE-EECCC------cHHHHHH---HHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHH
Confidence 46789999 99999 9999999 555667777766 488877777777776543235788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
.++++++.++++++|++|||||... +..+.+.++++.++++|+.+++.+++++++.+.+.+. ++||++||..+..
T Consensus 74 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~~sS~~~~~ 151 (276)
T PRK05875 74 ARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGG--GSFVGISSIAASN 151 (276)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEEechhhcC
Confidence 9999999999999999999999752 3456678889999999999999999999999987666 8999999987654
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + ....|+.+|++++.+++++++++...+|+++.|+||+++ ++...
T Consensus 152 ~~------------~-------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~ 199 (276)
T PRK05875 152 TH------------R-------WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP 199 (276)
T ss_pred CC------------C-------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence 43 2 567899999999999999999999899999999999999 77654
No 141
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.96 E-value=3.9e-27 Score=200.23 Aligned_cols=185 Identities=16% Similarity=0.116 Sum_probs=159.4
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
++|+++ |||++ +|||+.+ +.+|+++|..|+ .|+.++.++..+++.+. +.++.++++|+++.+++.+
T Consensus 5 ~~k~vl-ItG~s------g~iG~~l---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~ 72 (241)
T PRK07454 5 SMPRAL-ITGAS------SGIGKAT---ALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAP 72 (241)
T ss_pred CCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHH
Confidence 357788 99999 9999999 555667777766 48888888887777654 4578899999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
+++++.++++++|++|||||... +..+.+.++++..+++|+.+++.+++.++|.|.+++. ++||++||..+..+.
T Consensus 73 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~isS~~~~~~~- 149 (241)
T PRK07454 73 GIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGG--GLIINVSSIAARNAF- 149 (241)
T ss_pred HHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--cEEEEEccHHhCcCC-
Confidence 99999999999999999999863 3456677899999999999999999999999987766 899999998766543
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+ +...|+.+|++++.+++++++++.+.||++++|+||++. ++..
T Consensus 150 -----------~-------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~ 194 (241)
T PRK07454 150 -----------P-------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD 194 (241)
T ss_pred -----------C-------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence 2 567899999999999999999998889999999999999 8754
No 142
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.96 E-value=7.4e-27 Score=199.24 Aligned_cols=220 Identities=17% Similarity=0.154 Sum_probs=175.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCC--Ch
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLC--RL 96 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls--~~ 96 (292)
..+++|+++ |||++ +|||.++++ .|++.|+.|+ .|+.+++++..+++.+.. ..++.++++|++ +.
T Consensus 8 ~~~~~k~vl-ItG~~------g~iG~~la~---~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~ 76 (247)
T PRK08945 8 DLLKDRIIL-VTGAG------DGIGREAAL---TYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATP 76 (247)
T ss_pred cccCCCEEE-EeCCC------chHHHHHHH---HHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCH
Confidence 357899999 99999 999999955 4556676665 488888888888876543 346777888886 78
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
++++++++.+.+.++++|+||||||... +..+.+.+++++.+++|+.+++.++++++|.|.+++. ++||++||..
T Consensus 77 ~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~--~~iv~~ss~~ 154 (247)
T PRK08945 77 QNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPA--ASLVFTSSSV 154 (247)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCC--CEEEEEccHh
Confidence 9999999999999999999999999753 3556778899999999999999999999999988777 8999999987
Q ss_pred cccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccch
Q psy4251 174 HRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRT 252 (292)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~ 252 (292)
+..+. + ....|++||++++.+++++++++...||++++++||.+. ++........
T Consensus 155 ~~~~~------------~-------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~----- 210 (247)
T PRK08945 155 GRQGR------------A-------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE----- 210 (247)
T ss_pred hcCCC------------C-------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc-----
Confidence 76554 2 567899999999999999999999999999999999999 7654432110
Q ss_pred hhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 253 FSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 253 ~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
...-..+|++.++ ......++|+.+
T Consensus 211 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (247)
T PRK08945 211 ------DPQKLKTPEDIMPLYLYLMGDDSRRKNGQSF 241 (247)
T ss_pred ------cccCCCCHHHHHHHHHHHhCccccccCCeEE
Confidence 0112457888776 344446677654
No 143
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.95 E-value=2.6e-27 Score=200.66 Aligned_cols=176 Identities=14% Similarity=0.107 Sum_probs=146.2
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+|+++ ||||+ +|||+++ +.+|+++|+.|+. |+.+.. .+++.+. .+.++++|++|.++++++
T Consensus 2 ~k~vl-ItGas------~gIG~~i---a~~l~~~G~~V~~~~r~~~~~---~~~~~~~----~~~~~~~D~~~~~~~~~~ 64 (236)
T PRK06483 2 PAPIL-ITGAG------QRIGLAL---AWHLLAQGQPVIVSYRTHYPA---IDGLRQA----GAQCIQADFSTNAGIMAF 64 (236)
T ss_pred CceEE-EECCC------ChHHHHH---HHHHHHCCCeEEEEeCCchhH---HHHHHHc----CCEEEEcCCCCHHHHHHH
Confidence 46788 99999 9999999 5556677877764 665433 3334332 267889999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC--CCCcEEEEEcCccccccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA--KLFARVVVVSSESHRYSY 178 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~--~~~~~iV~vsS~~~~~~~ 178 (292)
++++.+.++++|++|||||... ...+.+.++|++++++|+.+++.+++.++|.|.++. . ++||++||..+..+.
T Consensus 65 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~--g~iv~~ss~~~~~~~ 142 (236)
T PRK06483 65 IDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAA--SDIIHITDYVVEKGS 142 (236)
T ss_pred HHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCC--ceEEEEcchhhccCC
Confidence 9999999999999999999753 345567889999999999999999999999998765 4 899999998765443
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
+ ....|++||++++.|++++++++.+ +|+||+|+||++. +.
T Consensus 143 ------------~-------~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~ 184 (236)
T PRK06483 143 ------------D-------KHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNE 184 (236)
T ss_pred ------------C-------CCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCC
Confidence 2 5678999999999999999999987 5999999999997 53
No 144
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.95 E-value=4e-27 Score=200.90 Aligned_cols=183 Identities=16% Similarity=0.170 Sum_probs=155.3
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++.||+++ ||||+ +|||.++ +.+|+++|+.|+. |+.+++++..+++ +.++.++++|++|.+++
T Consensus 3 ~~~~k~vl-ItGas------g~iG~~l---a~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~ 67 (249)
T PRK06500 3 RLQGKTAL-ITGGT------SGIGLET---ARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQ 67 (249)
T ss_pred CCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHH
Confidence 46789988 99999 9999999 6666677877764 7776666555444 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
..+++.+.+.++++|++|||||... +..+.+.+++++++++|+.+++.++++++|+|.+ . +++|+++|..+..+
T Consensus 68 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~--~~~i~~~S~~~~~~ 143 (249)
T PRK06500 68 KALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--P--ASIVLNGSINAHIG 143 (249)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--C--CEEEEEechHhccC
Confidence 9999999999999999999999763 3456788899999999999999999999999864 3 78999999876655
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
. + ....|+.+|+++++++++++.++.+.||++++++||.+. ++.+.
T Consensus 144 ~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~ 190 (249)
T PRK06500 144 M------------P-------NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGK 190 (249)
T ss_pred C------------C-------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHh
Confidence 4 2 567899999999999999999998889999999999999 87654
No 145
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.95 E-value=4.8e-27 Score=203.88 Aligned_cols=182 Identities=14% Similarity=0.091 Sum_probs=154.3
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.+++++ ||||+ +|||+++ +.+|++.|+.|+ .|+.++++...+ .. +.++..+++|++|.+++.+
T Consensus 3 ~~~~vl-VtGas------ggiG~~l---a~~l~~~G~~V~~~~r~~~~~~~l~~----~~-~~~~~~~~~D~~d~~~~~~ 67 (277)
T PRK06180 3 SMKTWL-ITGVS------SGFGRAL---AQAALAAGHRVVGTVRSEAARADFEA----LH-PDRALARLLDVTDFDAIDA 67 (277)
T ss_pred CCCEEE-EecCC------ChHHHHH---HHHHHhCcCEEEEEeCCHHHHHHHHh----hc-CCCeeEEEccCCCHHHHHH
Confidence 367788 99999 9999999 555667777766 477766554333 22 3478889999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
+++++.+.++++|+||||||... +..+.+.+++++.+++|+.+++.++++++|++++++. ++||++||.++..+.
T Consensus 68 ~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--~~iv~iSS~~~~~~~- 144 (277)
T PRK06180 68 VVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRR--GHIVNITSMGGLITM- 144 (277)
T ss_pred HHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCC--CEEEEEecccccCCC-
Confidence 99999999999999999999863 4566778889999999999999999999999987776 899999998776654
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+ +...|+++|++++.++++++.++...|+++++++||.+. ++..
T Consensus 145 -----------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~ 189 (277)
T PRK06180 145 -----------P-------GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG 189 (277)
T ss_pred -----------C-------CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence 2 678999999999999999999998889999999999998 7644
No 146
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.95 E-value=4.6e-27 Score=202.00 Aligned_cols=188 Identities=18% Similarity=0.144 Sum_probs=161.0
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||..+ +..|+++|+.|+ .|++++.++..+++.+. +.++.++++|+++.+++
T Consensus 4 ~~~~~~vl-ItGas------g~iG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~ 71 (262)
T PRK13394 4 NLNGKTAV-VTGAA------SGIGKEI---ALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAV 71 (262)
T ss_pred cCCCCEEE-EECCC------ChHHHHH---HHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHH
Confidence 46789999 99999 9999999 555667777765 58888888888888665 55788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHH-HhcCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENAL-IKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l-~~~~~~~~~iV~vsS~~~~~ 176 (292)
+++++++.+.++++|+||||||... +..+.+.++++..+++|+.+++.+++.+++.+ ++.+. ++||++||..+..
T Consensus 72 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~--~~iv~~ss~~~~~ 149 (262)
T PRK13394 72 NAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRG--GVVIYMGSVHSHE 149 (262)
T ss_pred HHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCC--cEEEEEcchhhcC
Confidence 9999999999999999999999863 33456778899999999999999999999999 65556 8999999986654
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + +...|+.+|+++..++++++.++.+.||++++++||.+. ++.+.
T Consensus 150 ~~------------~-------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~ 197 (262)
T PRK13394 150 AS------------P-------LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDK 197 (262)
T ss_pred CC------------C-------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhh
Confidence 43 2 567899999999999999999998889999999999999 76543
No 147
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.95 E-value=5.7e-27 Score=226.52 Aligned_cols=190 Identities=17% Similarity=0.158 Sum_probs=163.3
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
..+++||+++ ||||+ +|||+++ +.+|++.|+.|+ .|+.+++++..+++... +.++.++++|++|.+
T Consensus 366 ~~~~~~k~vl-ItGas------~giG~~l---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~ 433 (657)
T PRK07201 366 RGPLVGKVVL-ITGAS------SGIGRAT---AIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSA 433 (657)
T ss_pred ccCCCCCEEE-EeCCC------CHHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHH
Confidence 3568899999 99999 9999999 555667777766 48888888888888665 568999999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccCC--CCCC--CCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFGL--GFSH--TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~~--~~~~--~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
++.++++++.++++++|++|||||.... ..+. +.++++..+++|+.+++.+++.++|.|++++. ++||++||.+
T Consensus 434 ~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--g~iv~isS~~ 511 (657)
T PRK07201 434 AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRF--GHVVNVSSIG 511 (657)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC--CEEEEECChh
Confidence 9999999999999999999999997532 1221 24679999999999999999999999988777 8999999987
Q ss_pred cccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 174 HRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+..+. + ....|++||++++.|+++++.++.+.||+|++|+||+|+ ++...
T Consensus 512 ~~~~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~ 562 (657)
T PRK07201 512 VQTNA------------P-------RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP 562 (657)
T ss_pred hcCCC------------C-------CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence 76544 2 567899999999999999999999889999999999999 88754
No 148
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.95 E-value=3.5e-27 Score=203.89 Aligned_cols=179 Identities=18% Similarity=0.155 Sum_probs=152.9
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
++++++ ||||+ +|||+++ +.+|+++|+.|+. |+.++.+. ..++.++++|++|++++++
T Consensus 3 ~~~~vl-VtGas------g~iG~~~---a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~ 62 (270)
T PRK06179 3 NSKVAL-VTGAS------SGIGRAT---AEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQA 62 (270)
T ss_pred CCCEEE-EecCC------CHHHHHH---HHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHH
Confidence 356777 99999 9999999 5556677877764 66544321 2367889999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
+++++.++++++|+||||||+.. +..+.+.++++..+++|+.|++.+++.++|.|++++. ++||++||..+..+.
T Consensus 63 ~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--~~iv~isS~~~~~~~- 139 (270)
T PRK06179 63 AVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGS--GRIINISSVLGFLPA- 139 (270)
T ss_pred HHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--ceEEEECCccccCCC-
Confidence 99999999999999999999863 4556688899999999999999999999999988777 999999998776554
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+ ....|+++|++++.++++++.++.+.||++++|+||++. ++..+.
T Consensus 140 -----------~-------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~ 186 (270)
T PRK06179 140 -----------P-------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANA 186 (270)
T ss_pred -----------C-------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccccc
Confidence 2 567899999999999999999999999999999999999 876653
No 149
>PRK07069 short chain dehydrogenase; Validated
Probab=99.95 E-value=1.4e-26 Score=197.84 Aligned_cols=184 Identities=17% Similarity=0.091 Sum_probs=154.9
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC-HHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC-WDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
++ ||||+ +|||+++ +..|+++|+.|+. |+ .+++++..+++.+......+..+++|++|.+++.++++
T Consensus 2 il-VtG~~------~~iG~~~---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 71 (251)
T PRK07069 2 AF-ITGAA------GGLGRAI---ARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLA 71 (251)
T ss_pred EE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHH
Confidence 55 99999 9999999 5556677877764 66 67777777777654323356678999999999999999
Q ss_pred HHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD 182 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~ 182 (292)
++.+.++++|++|||||... +..+.+.+++++.+++|+.+++.+++.++|.|.+++. ++||++||..+..+.
T Consensus 72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~ii~~ss~~~~~~~---- 145 (251)
T PRK07069 72 QAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP--ASIVNISSVAAFKAE---- 145 (251)
T ss_pred HHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--cEEEEecChhhccCC----
Confidence 99999999999999999863 3556678899999999999999999999999987766 899999998776654
Q ss_pred CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCC--eEEEEecCCccc-ccccc
Q psy4251 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYK--IALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+++|+++..++++++.++..++ |+|+.|+||+++ ++...
T Consensus 146 --------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~ 193 (251)
T PRK07069 146 --------P-------DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP 193 (251)
T ss_pred --------C-------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH
Confidence 2 567899999999999999999997664 999999999999 87754
No 150
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.95 E-value=8.1e-27 Score=202.22 Aligned_cols=182 Identities=16% Similarity=0.087 Sum_probs=155.6
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.+|+++ ||||+ +|||+.+ +.+++++|+.|+ .|+.+++++..+++ +.++.++++|++|.+++.+
T Consensus 2 ~~k~vl-ItGas------g~iG~~~---a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~ 66 (275)
T PRK08263 2 MEKVWF-ITGAS------RGFGRAW---TEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFA 66 (275)
T ss_pred CCCEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHH
Confidence 467788 99999 9999999 555667777665 47777766554433 3467889999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
+++.+.+.++++|++|||||... +..+.+.+++++.+++|+.+++.+++.++|.|++++. ++||++||..+..+.
T Consensus 67 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~vsS~~~~~~~- 143 (275)
T PRK08263 67 AVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRS--GHIIQISSIGGISAF- 143 (275)
T ss_pred HHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CEEEEEcChhhcCCC-
Confidence 99999999999999999999863 4566788999999999999999999999999988766 899999998777654
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+ ....|+.+|++++.+++.++.++.+.||+++.++||++. ++..
T Consensus 144 -----------~-------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~ 188 (275)
T PRK08263 144 -----------P-------MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG 188 (275)
T ss_pred -----------C-------CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence 2 567899999999999999999999889999999999999 7764
No 151
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.95 E-value=7e-27 Score=196.52 Aligned_cols=194 Identities=13% Similarity=0.094 Sum_probs=150.3
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ +|||+++ +..+++.|+.|+ .|+.+++++..+++ .+.++++|+++.++++++++
T Consensus 2 ~vl-ItGas------~giG~~i---a~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~ 64 (223)
T PRK05884 2 EVL-VTGGD------TDLGRTI---AEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARG 64 (223)
T ss_pred eEE-EEeCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHH
Confidence 366 99999 9999999 555667777765 48887776665543 35678999999999999988
Q ss_pred HHHHhCCCccEEEEcccccC----C----CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 105 EYQKKFRSLNILVLNAGVFG----L----GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~----~----~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++.+ ++|++|||||... + ..+ +.++|++++++|+.++++++++++|.|.+ . |+||++||..
T Consensus 65 ~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~--g~Iv~isS~~--- 133 (223)
T PRK05884 65 LFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--G--GSIISVVPEN--- 133 (223)
T ss_pred HHhh---cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--C--CeEEEEecCC---
Confidence 8753 6999999998531 1 112 46789999999999999999999999964 4 8999999965
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
. + ....|++||+++.+|+++++.++.++||+||+|+||+++ ++.+....
T Consensus 134 ~-------------~-------~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~~---------- 183 (223)
T PRK05884 134 P-------------P-------AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLSR---------- 183 (223)
T ss_pred C-------------C-------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhccC----------
Confidence 1 1 456899999999999999999999999999999999999 76543211
Q ss_pred hhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 256 ISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 256 ~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
. + ..++++.+. ++.....+|+.+
T Consensus 184 ---~-p-~~~~~~ia~~~~~l~s~~~~~v~G~~i 212 (223)
T PRK05884 184 ---T-P-PPVAAEIARLALFLTTPAARHITGQTL 212 (223)
T ss_pred ---C-C-CCCHHHHHHHHHHHcCchhhccCCcEE
Confidence 1 1 126777766 444556677754
No 152
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.95 E-value=1.8e-26 Score=196.46 Aligned_cols=226 Identities=19% Similarity=0.145 Sum_probs=177.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE---EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY---QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~---~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++.+|+++ ||||+ +|||..+++. +++.|+.++ .|+.++.++..+++... +.++.++++|++++++
T Consensus 2 ~~~~~~il-I~Gas------g~iG~~la~~---l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~ 69 (247)
T PRK05565 2 KLMGKVAI-VTGAS------GGIGRAIAEL---LAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEED 69 (247)
T ss_pred CCCCCEEE-EeCCC------cHHHHHHHHH---HHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHH
Confidence 57788988 99999 9999999554 556666654 47777777777777653 4578999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+.++++|+||||||... +..+.+.++++..+++|+.+++.+++.++|.+.+++. +++|++||..+..
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~v~~sS~~~~~ 147 (247)
T PRK05565 70 VENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKS--GVIVNISSIWGLI 147 (247)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEECCHhhcc
Confidence 99999999998899999999999863 3456688899999999999999999999999987766 8999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
+. + ....|+.+|.++..++++++.++...||++++++||+++ ++.+..... ....+...
T Consensus 148 ~~------------~-------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-~~~~~~~~ 207 (247)
T PRK05565 148 GA------------S-------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE-DKEGLAEE 207 (247)
T ss_pred CC------------C-------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH-HHHHHHhc
Confidence 54 2 566899999999999999999998889999999999999 776654321 00011111
Q ss_pred hhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 256 ISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 256 ~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
. ..+...++++.+. .......+|+++
T Consensus 208 ~--~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~ 239 (247)
T PRK05565 208 I--PLGRLGKPEEIAKVVLFLASDDASYITGQII 239 (247)
T ss_pred C--CCCCCCCHHHHHHHHHHHcCCccCCccCcEE
Confidence 1 1122457788875 444556778766
No 153
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.95 E-value=1.7e-26 Score=197.72 Aligned_cols=188 Identities=24% Similarity=0.279 Sum_probs=157.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE---EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY---QNCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~---~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
+++++++++ ||||+ +|||.++++ .++++|..|+ .|+.++.++..+++... +.++.++++|++|.+
T Consensus 2 ~~~~~~~il-ItGas------g~iG~~la~---~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~ 69 (254)
T PRK12746 2 KNLDGKVAL-VTGAS------RGIGRAIAM---RLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSID 69 (254)
T ss_pred CCCCCCEEE-EeCCC------chHHHHHHH---HHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHH
Confidence 457789998 99999 999999944 5566777664 37777777777776543 457889999999999
Q ss_pred HHHHHHHHHHHhC------CCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEE
Q psy4251 98 SVKKFAEEYQKKF------RSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVV 169 (292)
Q Consensus 98 ~v~~~~~~~~~~~------~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~v 169 (292)
++.++++++.+++ +++|++|||||... ...+.+.+.++..+++|+.+++++++.+++.+.+. +++|++
T Consensus 70 ~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~v~~ 145 (254)
T PRK12746 70 GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE----GRVINI 145 (254)
T ss_pred HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC----CEEEEE
Confidence 9999999998876 47999999999863 34566788899999999999999999999998643 799999
Q ss_pred cCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 170 SSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 170 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
||..+..+. + +...|+.+|++++.+++++++++.+.|+++++++||++. ++.+..
T Consensus 146 sS~~~~~~~------------~-------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~ 201 (254)
T PRK12746 146 SSAEVRLGF------------T-------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL 201 (254)
T ss_pred CCHHhcCCC------------C-------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh
Confidence 998776543 2 567899999999999999999998889999999999999 876543
No 154
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.95 E-value=1.3e-26 Score=198.10 Aligned_cols=213 Identities=15% Similarity=0.110 Sum_probs=166.3
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++|++++ |||++ +|||..+++ .+.+.|..|+ .|+.+++++..+++... +.++.++++|+++.+++
T Consensus 2 ~~~~~~~l-ItG~~------g~iG~~~a~---~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 69 (253)
T PRK08217 2 DLKDKVIV-ITGGA------QGLGRAMAE---YLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDV 69 (253)
T ss_pred CCCCCEEE-EECCC------chHHHHHHH---HHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHH
Confidence 36789999 99999 999999944 4556676655 48888888888887655 56889999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccCC--C---------CCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhc-CCCCcEEE
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFGL--G---------FSHTEDGFETTFQVNHLAHFYLTLQLENALIKG-AKLFARVV 167 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~~--~---------~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~-~~~~~~iV 167 (292)
+++++.+.+.++++|++|||||.... . .+.+.+.++.++++|+.+++.+++.++|.|.+. .. ++||
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~--~~iv 147 (253)
T PRK08217 70 EATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSK--GVII 147 (253)
T ss_pred HHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC--eEEE
Confidence 99999999888899999999997532 1 345678899999999999999999999999765 34 7899
Q ss_pred EEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccccccc
Q psy4251 168 VVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRF 246 (292)
Q Consensus 168 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~ 246 (292)
++||.+. .+. + +...|+++|++++.+++++++++.+.||++++++||.+. ++.+.....
T Consensus 148 ~~ss~~~-~~~------------~-------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~ 207 (253)
T PRK08217 148 NISSIAR-AGN------------M-------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPE 207 (253)
T ss_pred EEccccc-cCC------------C-------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHH
Confidence 9988643 332 2 567899999999999999999998889999999999999 877553221
Q ss_pred CCccchhhhhhccccccCCHHHhhc
Q psy4251 247 GTPVRTFSWISRVRPVTNFQVDLTG 271 (292)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~a~ 271 (292)
....+.... ..+...++++.+.
T Consensus 208 -~~~~~~~~~--~~~~~~~~~~~a~ 229 (253)
T PRK08217 208 -ALERLEKMI--PVGRLGEPEEIAH 229 (253)
T ss_pred -HHHHHHhcC--CcCCCcCHHHHHH
Confidence 011111111 1223467888887
No 155
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.95 E-value=2.1e-26 Score=196.63 Aligned_cols=178 Identities=15% Similarity=0.207 Sum_probs=150.8
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ +|||.++ +..+.+.|+.|+ .|+.+++++..+++ +.++.++++|+++.+++.++++
T Consensus 2 ~vl-ItGas------g~iG~~l---a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~ 66 (248)
T PRK10538 2 IVL-VTGAT------AGFGECI---TRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLA 66 (248)
T ss_pred EEE-EECCC------chHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHH
Confidence 466 99999 9999999 555666777765 48877766655543 3468899999999999999999
Q ss_pred HHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
++.+.++++|++|||||... +..+.+.++++.++++|+.+++.+++.++|.+.+++. ++||++||..+..+.
T Consensus 67 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~isS~~~~~~~--- 141 (248)
T PRK10538 67 SLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH--GHIINIGSTAGSWPY--- 141 (248)
T ss_pred HHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEECCcccCCCC---
Confidence 99999999999999999752 4456788899999999999999999999999987766 899999998765443
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
+ +...|+.+|++++.+++.++.++.+.||++++|+||.+. +..
T Consensus 142 ---------~-------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~ 185 (248)
T PRK10538 142 ---------A-------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEF 185 (248)
T ss_pred ---------C-------CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccccc
Confidence 2 567899999999999999999999999999999999997 543
No 156
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.95 E-value=1.3e-26 Score=197.24 Aligned_cols=198 Identities=13% Similarity=0.115 Sum_probs=162.6
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|+++ ||||+ +|||+++ +.+++++|+.|+ .|+.++.++..+++... ++.++.++++|+++++++++++
T Consensus 2 ~~vl-ItGas------~giG~~~---a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~ 70 (243)
T PRK07102 2 KKIL-IIGAT------SDIARAC---ARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFL 70 (243)
T ss_pred cEEE-EEcCC------cHHHHHH---HHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHH
Confidence 5778 99999 9999999 555667787765 48888888877777654 2568999999999999999999
Q ss_pred HHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
+++.+ ++|++|||||... +..+.+.+++++.+++|+.+++.+++++.|.|.+++. ++||++||..+..+.
T Consensus 71 ~~~~~---~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~~~~--- 142 (243)
T PRK07102 71 DSLPA---LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGS--GTIVGISSVAGDRGR--- 142 (243)
T ss_pred HHHhh---cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC--CEEEEEecccccCCC---
Confidence 98865 4799999999763 3445677888899999999999999999999988777 999999998766543
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhhccc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISRVR 260 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~~~ 260 (292)
+ ....|+.+|+++.+++++++.++.+.||++++|+||+++ ++.+.... ..
T Consensus 143 ---------~-------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~-------------~~ 193 (243)
T PRK07102 143 ---------A-------SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKL-------------PG 193 (243)
T ss_pred ---------C-------CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccCC-------------Cc
Confidence 2 456799999999999999999999999999999999999 87654321 11
Q ss_pred cccCCHHHhhc
Q psy4251 261 PVTNFQVDLTG 271 (292)
Q Consensus 261 ~~~~~~~~~a~ 271 (292)
..+.++++.++
T Consensus 194 ~~~~~~~~~a~ 204 (243)
T PRK07102 194 PLTAQPEEVAK 204 (243)
T ss_pred cccCCHHHHHH
Confidence 23568888887
No 157
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.95 E-value=2e-26 Score=199.71 Aligned_cols=188 Identities=17% Similarity=0.178 Sum_probs=159.1
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+.++|+++ ||||+ +|||+++ +.+|+.+|+.|+ .|+.+.+++..+++... +.++.++++|+++.++
T Consensus 6 ~~~~~~~vl-VtGa~------g~iG~~l---a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~ 73 (274)
T PRK07775 6 PHPDRRPAL-VAGAS------SGIGAAT---AIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDS 73 (274)
T ss_pred CCCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHH
Confidence 356678888 99999 9999999 555667787765 47777777777776654 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+.++++|++|||||... +..+.+.++++..+++|+.+++.++++++|.+.++.. ++||++||..+..
T Consensus 74 ~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~--g~iv~isS~~~~~ 151 (274)
T PRK07775 74 VKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRR--GDLIFVGSDVALR 151 (274)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--ceEEEECChHhcC
Confidence 99999999998899999999999863 3455677889999999999999999999999887666 8999999987665
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+. + ....|+.+|++++.+++++++++...||++++++||+++ ++..
T Consensus 152 ~~------------~-------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~ 198 (274)
T PRK07775 152 QR------------P-------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW 198 (274)
T ss_pred CC------------C-------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence 43 2 456899999999999999999998889999999999998 6543
No 158
>PRK12742 oxidoreductase; Provisional
Probab=99.95 E-value=1.5e-26 Score=195.92 Aligned_cols=214 Identities=15% Similarity=0.130 Sum_probs=159.5
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
+++||+++ ||||+ +|||+++ +..|.++|+.|+. ++.++.++..+++ .+.++.+|++|.++
T Consensus 3 ~~~~k~vl-ItGas------ggIG~~~---a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~ 65 (237)
T PRK12742 3 AFTGKKVL-VLGGS------RGIGAAI---VRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDA 65 (237)
T ss_pred CCCCCEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHH
Confidence 46789999 99999 9999999 5556677877653 3555555443332 24678899999998
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.+++++ ++++|++|||||... +..+.+.++|++.+++|+.+++.+++.+++.|++ . ++||++||..+..
T Consensus 66 ~~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~--g~iv~isS~~~~~ 137 (237)
T PRK12742 66 VIDVVRK----SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--G--GRIIIIGSVNGDR 137 (237)
T ss_pred HHHHHHH----hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--C--CeEEEEecccccc
Confidence 8877653 578999999999863 4556788899999999999999999999999864 3 8999999986532
Q ss_pred -ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhh
Q psy4251 177 -SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFS 254 (292)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~ 254 (292)
+. + +...|+.+|++++.+++++++++.+.||+||+|+||+++ ++....... .....
T Consensus 138 ~~~------------~-------~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~---~~~~~ 195 (237)
T PRK12742 138 MPV------------A-------GMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPM---KDMMH 195 (237)
T ss_pred CCC------------C-------CCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHH---HHHHH
Confidence 21 2 567899999999999999999999999999999999999 876532110 01111
Q ss_pred hhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 255 WISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 255 ~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
... ....+.+|++.++ ++.....+|..+
T Consensus 196 ~~~-~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~ 229 (237)
T PRK12742 196 SFM-AIKRHGRPEEVAGMVAWLAGPEASFVTGAMH 229 (237)
T ss_pred hcC-CCCCCCCHHHHHHHHHHHcCcccCcccCCEE
Confidence 110 1123468888887 444556677654
No 159
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.95 E-value=2.9e-26 Score=195.38 Aligned_cols=188 Identities=15% Similarity=0.132 Sum_probs=158.1
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE------cCHHHHHHHHHHHHhhCCCCceEEEEccCCC
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ------NCWDKANDAISKILTEKPSAQCIAMELDLCR 95 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~------r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~ 95 (292)
++++++++ ||||+ +|||+++ +..|.++|+.|+. ++.+..++..+++... +.++.++++|+++
T Consensus 3 ~~~~~~il-ItGas------g~iG~~l---a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~ 70 (249)
T PRK12827 3 SLDSRRVL-ITGGS------GGLGRAI---AVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRD 70 (249)
T ss_pred CcCCCEEE-EECCC------ChHHHHH---HHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCC
Confidence 46788888 99999 9999999 5556677777654 3456666666666554 4578999999999
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHH-HHHHhcCCCCcEEEEEcCc
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLE-NALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll-~~l~~~~~~~~~iV~vsS~ 172 (292)
.+++.++++++.+.++++|+||||||... +..+.+.++++..+++|+.+++.+++++. +.+++++. ++||++||.
T Consensus 71 ~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~iv~~sS~ 148 (249)
T PRK12827 71 FAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRG--GRIVNIASV 148 (249)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCC--eEEEEECCc
Confidence 99999999999998899999999999864 45667788899999999999999999999 66666666 899999998
Q ss_pred ccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 173 SHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
.+..+. + +...|+.+|+++..++++++.++.+.||++++++||++. ++...
T Consensus 149 ~~~~~~------------~-------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~ 200 (249)
T PRK12827 149 AGVRGN------------R-------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN 200 (249)
T ss_pred hhcCCC------------C-------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc
Confidence 776553 2 567899999999999999999998889999999999999 77654
No 160
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.95 E-value=2.3e-26 Score=197.64 Aligned_cols=186 Identities=17% Similarity=0.233 Sum_probs=157.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcE-EE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKL-FY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~-v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++++|+++ ||||+ +|||..+ +..+.+.|+. |+ .|+.++.++..+++... +.++.++++|++++++
T Consensus 3 ~~~~k~vl-ItGa~------g~iG~~l---a~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~ 70 (260)
T PRK06198 3 RLDGKVAL-VTGGT------QGLGAAI---ARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVED 70 (260)
T ss_pred CCCCcEEE-EeCCC------chHHHHH---HHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHH
Confidence 46789999 99999 9999999 5555566655 44 48877777777777544 5578889999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~ 175 (292)
+.++++.+.++++++|++|||||... +..+.+.++++.++++|+.+++.+++.+++.+.++. . ++||++||..+.
T Consensus 71 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--g~iv~~ss~~~~ 148 (260)
T PRK06198 71 CRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAE--GTIVNIGSMSAH 148 (260)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--CEEEEECCcccc
Confidence 99999999999999999999999863 345678889999999999999999999999997653 4 899999998766
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
.+. + ....|+.+|.+++.++++++.++...||+++.++||++. ++.
T Consensus 149 ~~~------------~-------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~ 195 (260)
T PRK06198 149 GGQ------------P-------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE 195 (260)
T ss_pred cCC------------C-------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence 543 2 567899999999999999999999889999999999999 764
No 161
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.95 E-value=2.4e-26 Score=195.17 Aligned_cols=185 Identities=16% Similarity=0.157 Sum_probs=156.3
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--c-CHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--N-CWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
|+++ |||++ +|||+.+ +..|++.|+.+++ | +.++.++..+++... +.++.++++|+++++++.++
T Consensus 1 k~~l-ItG~s------g~iG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~ 68 (242)
T TIGR01829 1 RIAL-VTGGM------GGIGTAI---CQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAA 68 (242)
T ss_pred CEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHH
Confidence 5677 99999 9999999 5556677877653 5 666666666666543 45789999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
++++.+.++++|+||||||... +..+.+.++++.++++|+.+++.+++.++|.+++.+. ++||++||..+..+.
T Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~iss~~~~~~~-- 144 (242)
T TIGR01829 69 VAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGW--GRIINISSVNGQKGQ-- 144 (242)
T ss_pred HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--cEEEEEcchhhcCCC--
Confidence 9999999999999999999863 3456678899999999999999999999999987766 899999998666543
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+ +...|+.+|+++..+++.+++++...||+++.++||++. ++.+..
T Consensus 145 ----------~-------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~ 191 (242)
T TIGR01829 145 ----------F-------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAM 191 (242)
T ss_pred ----------C-------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc
Confidence 2 567899999999999999999998889999999999999 776543
No 162
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.95 E-value=4.8e-27 Score=188.43 Aligned_cols=162 Identities=23% Similarity=0.277 Sum_probs=139.4
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC--HHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC--WDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|+++ ||||+ +|||+++++++.+.+...+.++.|+ .+..++.++++... +.++.++++|+++.+++++++
T Consensus 1 k~~l-ItGa~------~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~ 71 (167)
T PF00106_consen 1 KTVL-ITGAS------SGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALI 71 (167)
T ss_dssp EEEE-EETTT------SHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHH
T ss_pred CEEE-EECCC------CHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--ccccccccccccccccccccc
Confidence 5788 99999 9999999665444422233444688 78888898999865 589999999999999999999
Q ss_pred HHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
+++.++++++|++|||||... +..+.+.++|++.+++|+.+++++.++++| ++. ++||++||..+..+.
T Consensus 72 ~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~--g~iv~~sS~~~~~~~--- 142 (167)
T PF00106_consen 72 EEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGG--GKIVNISSIAGVRGS--- 142 (167)
T ss_dssp HHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTT--EEEEEEEEGGGTSSS---
T ss_pred cccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccc--cceEEecchhhccCC---
Confidence 999999999999999999975 456668899999999999999999999999 234 999999999988776
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHh
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLW 221 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~ 221 (292)
+ ++..|+++|+++.+|++++++|+
T Consensus 143 ---------~-------~~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 143 ---------P-------GMSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp ---------T-------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------C-------CChhHHHHHHHHHHHHHHHHHhc
Confidence 3 78899999999999999999986
No 163
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.95 E-value=1.6e-26 Score=198.11 Aligned_cols=187 Identities=14% Similarity=0.118 Sum_probs=161.6
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
+++|+++ |||++ +|||+++ +.++.++|+.|+ .|+.++.++..+++... +.++.++.||+++.+++.
T Consensus 2 ~~~~~vl-ItG~s------g~iG~~l---a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~ 69 (258)
T PRK12429 2 LKGKVAL-VTGAA------SGIGLEI---ALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAIN 69 (258)
T ss_pred CCCCEEE-EECCC------chHHHHH---HHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHH
Confidence 5678899 99999 9999999 555566777665 48888888888877654 568999999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
++++++.+.++++|+||||||... +..+.+.++++..+++|+.+++.+++.+++.|.+.+. ++||++||..+..+.
T Consensus 70 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~iss~~~~~~~ 147 (258)
T PRK12429 70 AGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGG--GRIINMASVHGLVGS 147 (258)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC--eEEEEEcchhhccCC
Confidence 999999999999999999999763 3455677889999999999999999999999988776 899999998776654
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+.+|+++..+++.++.++.+.||++++++||++. ++...
T Consensus 148 ------------~-------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~ 193 (258)
T PRK12429 148 ------------A-------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK 193 (258)
T ss_pred ------------C-------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh
Confidence 2 678899999999999999999998889999999999999 76543
No 164
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.95 E-value=1.8e-26 Score=197.70 Aligned_cols=186 Identities=16% Similarity=0.111 Sum_probs=154.2
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC-HHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC-WDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
|+++ ||||+ +|||.++ +..|++.|+.|++ |+ .+..++..++++.. +.++.++++|+++.+++.++
T Consensus 3 k~vl-ItG~s------g~iG~~l---a~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~ 70 (256)
T PRK12745 3 PVAL-VTGGR------RGIGLGI---ARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAM 70 (256)
T ss_pred cEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHH
Confidence 6777 99999 9999999 5556677876654 43 45555666666543 45789999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC-C---CcEEEEEcCccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK-L---FARVVVVSSESH 174 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~-~---~~~iV~vsS~~~ 174 (292)
++++.+.++++|++|||||... ++.+.+.++++..+++|+.+++.+++++++.|.++.. . .++||++||..+
T Consensus 71 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 150 (256)
T PRK12745 71 LDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNA 150 (256)
T ss_pred HHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhh
Confidence 9999999999999999999853 3455678899999999999999999999999986542 0 267999999887
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
..+. + +...|+.+|++++.++++++.++.+.||++++++||.+. ++...
T Consensus 151 ~~~~------------~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~ 200 (256)
T PRK12745 151 IMVS------------P-------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP 200 (256)
T ss_pred ccCC------------C-------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc
Confidence 6654 2 567899999999999999999998889999999999999 77654
No 165
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.95 E-value=1.7e-26 Score=197.43 Aligned_cols=180 Identities=16% Similarity=0.213 Sum_probs=154.1
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++++|+++ |||++ +|||.++ +.++++.|+.|+. |+. +... +.++.++++|+++.++
T Consensus 4 ~~~~~k~vl-ItGas------~~iG~~l---a~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~ 62 (252)
T PRK08220 4 MDFSGKTVW-VTGAA------QGIGYAV---ALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAA 62 (252)
T ss_pred cCCCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHH
Confidence 457899999 99999 9999999 6667778888775 443 1122 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.++++++|++|||||... +..+.+.++++.++++|+.+++.++++++|.|.++.. ++||++||..+..
T Consensus 63 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~~ss~~~~~ 140 (252)
T PRK08220 63 VAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRS--GAIVTVGSNAAHV 140 (252)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--CEEEEECCchhcc
Confidence 99999999999999999999999863 4556688899999999999999999999999987766 8999999987665
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + +...|+.+|++++.+++++++++.+.||+|+++.||.+. ++...
T Consensus 141 ~~------------~-------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~ 188 (252)
T PRK08220 141 PR------------I-------GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRT 188 (252)
T ss_pred CC------------C-------CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhh
Confidence 43 2 567899999999999999999999899999999999999 77554
No 166
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.95 E-value=2.1e-26 Score=200.08 Aligned_cols=187 Identities=18% Similarity=0.189 Sum_probs=159.5
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
++|+++ ||||+ +|||.++ +..|.++|+.|+ +|+.+..++..+++.....+.++.++.+|++|.+++.+
T Consensus 2 ~~k~~l-ItGas------g~iG~~l---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 71 (280)
T PRK06914 2 NKKIAI-VTGAS------SGFGLLT---TLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN 71 (280)
T ss_pred CCCEEE-EECCC------chHHHHH---HHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH
Confidence 467888 99999 9999999 555667787776 48888887777766654334579999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
++++.+.++++|++|||||... ...+.+.+++++.+++|+.+++.+++.++|.|++.+. ++||++||..+..+.
T Consensus 72 -~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~vsS~~~~~~~- 147 (280)
T PRK06914 72 -FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS--GKIINISSISGRVGF- 147 (280)
T ss_pred -HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CEEEEECcccccCCC-
Confidence 8999888999999999999864 3455677889999999999999999999999987766 899999998766554
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+.+|++++.++++++.++.++||++++++||.++ ++.+.
T Consensus 148 -----------~-------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 193 (280)
T PRK06914 148 -----------P-------GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEV 193 (280)
T ss_pred -----------C-------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhc
Confidence 2 567899999999999999999998889999999999999 87653
No 167
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.95 E-value=2.5e-26 Score=195.43 Aligned_cols=185 Identities=18% Similarity=0.162 Sum_probs=152.6
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHH-HHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWD-KANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
|+++ |||++ +|||.++ +..|.+.|..|+. |+.+ ..++...++... +.++.++++|+++.+++.++
T Consensus 3 k~vl-ItG~s------~~iG~~l---a~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~ 70 (245)
T PRK12824 3 KIAL-VTGAK------RGIGSAI---ARELLNDGYRVIATYFSGNDCAKDWFEEYGFT--EDQVRLKELDVTDTEECAEA 70 (245)
T ss_pred CEEE-EeCCC------chHHHHH---HHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc--CCeEEEEEcCCCCHHHHHHH
Confidence 4677 99999 9999999 5555667777764 5532 233333333222 45789999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
++++.++++++|++|||||... +..+.+.++++.++++|+.+++.+++.++|.+.+++. ++||++||..+..+.
T Consensus 71 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~iss~~~~~~~-- 146 (245)
T PRK12824 71 LAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGY--GRIINISSVNGLKGQ-- 146 (245)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC--eEEEEECChhhccCC--
Confidence 9999999999999999999863 3566788999999999999999999999999987766 899999998766543
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+ +...|+.+|+++++++++++.++.+.||+++.++||.+. ++.+..
T Consensus 147 ----------~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~ 193 (245)
T PRK12824 147 ----------F-------GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM 193 (245)
T ss_pred ----------C-------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc
Confidence 2 567899999999999999999998889999999999999 876543
No 168
>KOG1014|consensus
Probab=99.95 E-value=1.4e-26 Score=195.25 Aligned_cols=204 Identities=16% Similarity=0.098 Sum_probs=170.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+--|+.++ ||||| .|||++. +.+|+.+|..|+ +|+++|++.+.+||.+.++ .++.++.+|.++.+.
T Consensus 45 ~~~~g~WAV-VTGaT------DGIGKay---A~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~ 113 (312)
T KOG1014|consen 45 KEKLGSWAV-VTGAT------DGIGKAY---ARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDE 113 (312)
T ss_pred HHhcCCEEE-EECCC------CcchHHH---HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCch
Confidence 333468999 99999 9999999 777888988765 5999999999999999985 899999999999888
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--C--CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--L--GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESH 174 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~--~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~ 174 (292)
+.+-+.+..+. .+|-+||||+|... | +.+.+.+.++..+.+|..+...+++..+|.|.+++. |-||++||.++
T Consensus 114 ~ye~i~~~l~~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~--G~IvnigS~ag 190 (312)
T KOG1014|consen 114 VYEKLLEKLAG-LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKK--GIIVNIGSFAG 190 (312)
T ss_pred hHHHHHHHhcC-CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCC--ceEEEeccccc
Confidence 55554444443 25888999999975 2 334455578999999999999999999999998777 99999999998
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchh
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTF 253 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~ 253 (292)
..+. + ....|++||..+..|+++|++|+..+||.|-++.|++|. .|......
T Consensus 191 ~~p~------------p-------~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~-------- 243 (312)
T KOG1014|consen 191 LIPT------------P-------LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKP-------- 243 (312)
T ss_pred cccC------------h-------hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCC--------
Confidence 8876 3 789999999999999999999999999999999999999 77765432
Q ss_pred hhhhccccccCCHHHhhc
Q psy4251 254 SWISRVRPVTNFQVDLTG 271 (292)
Q Consensus 254 ~~~~~~~~~~~~~~~~a~ 271 (292)
+.+..+|+..|.
T Consensus 244 ------sl~~ps~~tfak 255 (312)
T KOG1014|consen 244 ------SLFVPSPETFAK 255 (312)
T ss_pred ------CCcCcCHHHHHH
Confidence 224567777766
No 169
>KOG1199|consensus
Probab=99.95 E-value=2.3e-28 Score=188.10 Aligned_cols=214 Identities=15% Similarity=0.075 Sum_probs=173.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC--HHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC--WDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+.+|-+++ |||+. +|+|+++ +.+|+.+|..++.-+ ..+..+.++++ ++++.|.++|+++++++
T Consensus 6 s~kglval-vtgga------sglg~at---aerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv 70 (260)
T KOG1199|consen 6 STKGLVAL-VTGGA------SGLGKAT---AERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDV 70 (260)
T ss_pred hhcCeeEE-eecCc------ccccHHH---HHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHH
Confidence 45677888 99999 9999999 667888888877533 55677777777 78999999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC----CCcEEE
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK----LFARVV 167 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~----~~~~iV 167 (292)
+..+...+.+||++|++|||||+.. .....+.+++++++++|++|+|+++++-...|-++.+ +.|.||
T Consensus 71 ~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgvii 150 (260)
T KOG1199|consen 71 RAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVII 150 (260)
T ss_pred HHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEE
Confidence 9999999999999999999999853 2234578899999999999999999999988865432 348999
Q ss_pred EEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccccccc
Q psy4251 168 VVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRF 246 (292)
Q Consensus 168 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~ 246 (292)
+..|.+++.+.. +..+|++||.++..|+.-+++++...|||++.+.||..+ ++....+..
T Consensus 151 ntasvaafdgq~-------------------gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpek 211 (260)
T KOG1199|consen 151 NTASVAAFDGQT-------------------GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEK 211 (260)
T ss_pred eeceeeeecCcc-------------------chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHH
Confidence 999999887763 789999999999999999999999999999999999999 888776532
Q ss_pred CCccchhhhhhccccccCCHHHhhc
Q psy4251 247 GTPVRTFSWISRVRPVTNFQVDLTG 271 (292)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~a~ 271 (292)
...|+..+...+.....|.|.+.
T Consensus 212 --v~~fla~~ipfpsrlg~p~eyah 234 (260)
T KOG1199|consen 212 --VKSFLAQLIPFPSRLGHPHEYAH 234 (260)
T ss_pred --HHHHHHHhCCCchhcCChHHHHH
Confidence 22333333222223456666654
No 170
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.95 E-value=1.6e-26 Score=200.30 Aligned_cols=178 Identities=16% Similarity=0.117 Sum_probs=150.0
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|+++ ||||+ +|||+++ +..+.+.|+.|+. |+.++.++. .+. .+.++++|+++.+++++++
T Consensus 2 k~vl-ItGas------ggiG~~l---a~~l~~~G~~V~~~~r~~~~~~~~----~~~----~~~~~~~Dl~~~~~~~~~~ 63 (274)
T PRK05693 2 PVVL-ITGCS------SGIGRAL---ADAFKAAGYEVWATARKAEDVEAL----AAA----GFTAVQLDVNDGAALARLA 63 (274)
T ss_pred CEEE-EecCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHH----HHC----CCeEEEeeCCCHHHHHHHH
Confidence 5677 99999 9999999 5556677887764 776655432 222 4678899999999999999
Q ss_pred HHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
+++.+.++++|+||||||... +..+.+.++++..+++|+.|++.++++++|.+.+. . ++||++||..+..+.
T Consensus 64 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~--g~iv~isS~~~~~~~--- 137 (274)
T PRK05693 64 EELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-R--GLVVNIGSVSGVLVT--- 137 (274)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C--CEEEEECCccccCCC---
Confidence 999999999999999999763 45667889999999999999999999999999754 3 899999998776554
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+ ....|+++|++++.++++++.++.+.||+|++|+||.|+ ++.++.
T Consensus 138 ---------~-------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~ 184 (274)
T PRK05693 138 ---------P-------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNA 184 (274)
T ss_pred ---------C-------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccccc
Confidence 2 567899999999999999999999899999999999999 877653
No 171
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.95 E-value=2.3e-26 Score=221.16 Aligned_cols=187 Identities=16% Similarity=0.175 Sum_probs=162.3
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
...++||+++ ||||+ +|||+++ +.+|++.|+.|+ .|+.+.+++..+++.+..+..++..+++|++|.+
T Consensus 409 ~~~l~gkvvL-VTGas------ggIG~ai---A~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~ 478 (676)
T TIGR02632 409 EKTLARRVAF-VTGGA------GGIGRET---ARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQ 478 (676)
T ss_pred CcCCCCCEEE-EeCCC------cHHHHHH---HHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHH
Confidence 4668899999 99999 9999999 555667787776 4888888888888776544457888999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESH 174 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~ 174 (292)
++.++++++.++++++|+||||||... +..+.+.++|+..+++|+.+++++++.+++.|+++. . ++||++||..+
T Consensus 479 ~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~--g~IV~iSS~~a 556 (676)
T TIGR02632 479 AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLG--GNIVFIASKNA 556 (676)
T ss_pred HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CEEEEEeChhh
Confidence 999999999999999999999999863 455667889999999999999999999999998764 4 79999999877
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
..+. + +...|++||++++.++++++.++.+.||+||+|+||.|.
T Consensus 557 ~~~~------------~-------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 557 VYAG------------K-------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred cCCC------------C-------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 6654 2 578999999999999999999999999999999999885
No 172
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.95 E-value=1.6e-26 Score=197.47 Aligned_cols=186 Identities=21% Similarity=0.217 Sum_probs=154.3
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHH--HHHHHHHHHhhCCC-CceEEEEccCCC-
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDK--ANDAISKILTEKPS-AQCIAMELDLCR- 95 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~--~~~~~~~l~~~~~~-~~~~~~~~Dls~- 95 (292)
++.+|+++ ||||+ +|||+++ +.+|++.|..++ .++.+. .+...+... ..+ ..+.+.++|+++
T Consensus 2 ~~~~~~il-ITGas------~GiG~ai---a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~ 69 (251)
T COG1028 2 DLSGKVAL-VTGAS------SGIGRAI---ARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDD 69 (251)
T ss_pred CCCCCEEE-EeCCC------CHHHHHH---HHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCC
Confidence 46788999 99999 9999999 666778887754 344332 333333333 112 368888999998
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
.++++.+++.+.+.+|++|++|||||+.. +..+.+.++|+..+++|+.+++.+++.+.|.++ . .+||++||.
T Consensus 70 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~---~--~~Iv~isS~ 144 (251)
T COG1028 70 EESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK---K--QRIVNISSV 144 (251)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh---h--CeEEEECCc
Confidence 99999999999999999999999999974 567788899999999999999999998888887 2 399999999
Q ss_pred ccccccCCCCCCCccccCcCCCCCChh-hhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccccc
Q psy4251 173 SHRYSYITKDTISKSVLSVENYSDFWA-MTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWW 244 (292)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~ 244 (292)
.+. ... + ...|++||+++.+|+++++.++.+.||++++|+||++. ++.+...
T Consensus 145 ~~~-~~~-------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~ 198 (251)
T COG1028 145 AGL-GGP-------------------PGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALE 198 (251)
T ss_pred hhc-CCC-------------------CCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhh
Confidence 887 542 4 48999999999999999999999999999999999999 8887543
No 173
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.95 E-value=1.5e-26 Score=195.78 Aligned_cols=218 Identities=15% Similarity=0.123 Sum_probs=162.5
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ |||++ +|||+++ +..|++.|+.|+. |+.... . ..++.++++|++++
T Consensus 2 ~l~~k~~l-VtGas------~~iG~~i---a~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~~~D~~~~--- 57 (235)
T PRK06550 2 EFMTKTVL-ITGAA------SGIGLAQ---ARAFLAQGAQVYGVDKQDKPD---------L--SGNFHFLQLDLSDD--- 57 (235)
T ss_pred CCCCCEEE-EcCCC------chHHHHH---HHHHHHCCCEEEEEeCCcccc---------c--CCcEEEEECChHHH---
Confidence 47889999 99999 9999999 5556677877764 443210 1 24688999999987
Q ss_pred HHHHHHHHHhCCCccEEEEccccc---CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVF---GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
++++.+.++++|++|||||.. .+..+.+.+++++.+++|+.+++.++++++|.+.+++. ++||++||..+..
T Consensus 58 ---~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~~ 132 (235)
T PRK06550 58 ---LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKS--GIIINMCSIASFV 132 (235)
T ss_pred ---HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEEcChhhcc
Confidence 444555568999999999975 34466788899999999999999999999999987776 8999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhh
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSW 255 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~ 255 (292)
+. + +...|+.+|+++..++++++.++.++||++++|+||+++ ++....... ......
T Consensus 133 ~~------------~-------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~~ 190 (235)
T PRK06550 133 AG------------G-------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP---GGLADW 190 (235)
T ss_pred CC------------C-------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc---hHHHHH
Confidence 54 2 567899999999999999999999899999999999999 876432211 111111
Q ss_pred hhcccc--ccCCHHHhhc------ccccCCCCCccc-cCCcccc
Q psy4251 256 ISRVRP--VTNFQVDLTG------TAEKVGLSGLPD-SEWMWHY 290 (292)
Q Consensus 256 ~~~~~~--~~~~~~~~a~------~~~~~~~~G~~~-~~~~w~~ 290 (292)
.....+ -+.++++.|. ++.....+|+.+ .+.-|.+
T Consensus 191 ~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~~~ 234 (235)
T PRK06550 191 VARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGWTL 234 (235)
T ss_pred HhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCceec
Confidence 111112 2468888887 444556677754 3444443
No 174
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.95 E-value=9.6e-26 Score=192.44 Aligned_cols=190 Identities=23% Similarity=0.261 Sum_probs=161.2
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++.+|+++ ||||+ ++||.++ +..|.++|+.|+ .|+.++.....+++... +.++.++.+|++|.++
T Consensus 2 ~~~~~~~il-ItGas------g~iG~~l---~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~ 69 (251)
T PRK12826 2 RDLEGRVAL-VTGAA------RGIGRAI---AVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAA 69 (251)
T ss_pred CCCCCCEEE-EcCCC------CcHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHH
Confidence 346789998 99999 9999999 555666776665 48888887777777655 4568999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc-
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR- 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~- 175 (292)
+.++++++.+.++++|++|||+|... +..+.+.++++..+++|+.+++.+++.++|.+.+++. ++||++||..+.
T Consensus 70 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~ii~~ss~~~~~ 147 (251)
T PRK12826 70 LKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG--GRIVLTSSVAGPR 147 (251)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--cEEEEEechHhhc
Confidence 99999999999999999999999864 3446678899999999999999999999999987766 899999998765
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
.+. + +...|+.+|++++.++++++.++...|++++.++||.+. +..+..
T Consensus 148 ~~~------------~-------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~ 197 (251)
T PRK12826 148 VGY------------P-------GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL 197 (251)
T ss_pred cCC------------C-------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc
Confidence 322 2 567899999999999999999998889999999999999 765543
No 175
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.95 E-value=8.4e-26 Score=192.41 Aligned_cols=186 Identities=15% Similarity=0.108 Sum_probs=154.4
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
++++ ||||+ +|||.++ +..|+++|+.|++ |+.++.++...++... +.++.++++|++|++++.++
T Consensus 2 ~~~l-ItGa~------g~iG~~l---~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~ 69 (247)
T PRK09730 2 AIAL-VTGGS------RGIGRAT---ALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAM 69 (247)
T ss_pred CEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHH
Confidence 4677 99999 9999999 5556677877742 7777777777777654 45788899999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC-CCcEEEEEcCccccccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK-LFARVVVVSSESHRYSY 178 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~-~~~~iV~vsS~~~~~~~ 178 (292)
++++.++++++|++|||||... +..+.+.++++..+++|+.+++.+++.+++.+.+... +.++||++||..+..+.
T Consensus 70 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~ 149 (247)
T PRK09730 70 FTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA 149 (247)
T ss_pred HHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC
Confidence 9999999999999999999752 3455677889999999999999999999999876531 11789999998776553
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
. . ....|+++|++++.++++++.++.+.||++++++||.+. ++..
T Consensus 150 ~-----------~-------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~ 195 (247)
T PRK09730 150 P-----------G-------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA 195 (247)
T ss_pred C-----------C-------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence 1 0 234699999999999999999998889999999999999 7654
No 176
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.95 E-value=6.9e-26 Score=196.44 Aligned_cols=181 Identities=16% Similarity=0.123 Sum_probs=151.8
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|+++ ||||+ +|||+++ +.+|++.|+.|+ .|+.+..++..+++ +.++.++++|++|.+++.+++
T Consensus 3 k~vl-VtGas------g~IG~~l---a~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~ 67 (276)
T PRK06482 3 KTWF-ITGAS------SGFGRGM---TERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVV 67 (276)
T ss_pred CEEE-EecCC------CHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHH
Confidence 6777 99999 9999999 555667777765 47776655544332 247889999999999999999
Q ss_pred HHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
+++.+.++++|+||||||... +..+.+.+++++.+++|+.+++.++++++|+|+++.. ++||++||..+..+.
T Consensus 68 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~~~~--- 142 (276)
T PRK06482 68 DRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG--GRIVQVSSEGGQIAY--- 142 (276)
T ss_pred HHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CEEEEEcCcccccCC---
Confidence 999988899999999999863 3455677889999999999999999999999987766 899999998765443
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+.||++++.++++++.++.+.||+++.++||.+. ++...
T Consensus 143 ---------~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~ 188 (276)
T PRK06482 143 ---------P-------GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG 188 (276)
T ss_pred ---------C-------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence 2 567899999999999999999998889999999999998 66543
No 177
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.94 E-value=1.3e-25 Score=193.19 Aligned_cols=184 Identities=18% Similarity=0.187 Sum_probs=156.3
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+++++ ||||+ +|||+++++ .+...|+.|+ .|+.++.++..+++... +.++.++.+|++|.+++.++
T Consensus 1 ~~~vl-VtGas------g~iG~~la~---~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~ 68 (263)
T PRK06181 1 GKVVI-ITGAS------EGIGRALAV---RLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERL 68 (263)
T ss_pred CCEEE-EecCC------cHHHHHHHH---HHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHH
Confidence 46777 99999 999999944 4556676665 48888888887777665 45788999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCC-CCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSH-TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~-~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
++++.++++++|++|||||... +..+. +.+++++.+++|+.+++.+++.++|.+.++ . ++||++||..+..+.
T Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~--~~iv~~sS~~~~~~~- 144 (263)
T PRK06181 69 IEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-R--GQIVVVSSLAGLTGV- 144 (263)
T ss_pred HHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C--CEEEEEecccccCCC-
Confidence 9999999999999999999763 33455 778899999999999999999999998755 3 899999998776554
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+.+|++++.++++++.++.+.+|+++++.||.+. ++.+.
T Consensus 145 -----------~-------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~ 190 (263)
T PRK06181 145 -----------P-------TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR 190 (263)
T ss_pred -----------C-------CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh
Confidence 2 567899999999999999999999889999999999999 77654
No 178
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.94 E-value=3.2e-25 Score=188.66 Aligned_cols=189 Identities=19% Similarity=0.234 Sum_probs=157.4
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCH-HHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCW-DKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++++|+++ |||++ +|||.++ +..+.+.|+.|+ .|+. +..+...+++... +.++.++++|+++.++
T Consensus 2 ~~~~~~vl-ItG~s------g~iG~~l---~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~ 69 (248)
T PRK05557 2 SLEGKVAL-VTGAS------RGIGRAI---AERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAES 69 (248)
T ss_pred CCCCCEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence 46788888 99999 9999999 555556777764 3543 3455666666544 5688999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+.++++|++|||||... +..+.+.++++..+++|+.+.+.+++.+++.+.+... +++|++||..+..
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~v~iss~~~~~ 147 (248)
T PRK05557 70 VERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRS--GRIINISSVVGLM 147 (248)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--eEEEEEcccccCc
Confidence 99999999998899999999999864 3456678889999999999999999999999987666 8999999987665
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
+. + +...|+.+|++++.+++++++++...||++++++||+++ ++.+..
T Consensus 148 ~~------------~-------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~ 196 (248)
T PRK05557 148 GN------------P-------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL 196 (248)
T ss_pred CC------------C-------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc
Confidence 54 2 567899999999999999999998889999999999998 776543
No 179
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.94 E-value=9.7e-26 Score=191.63 Aligned_cols=191 Identities=16% Similarity=0.109 Sum_probs=151.6
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
++++ ||||+ +|||+++ +.+|+.+|+.|+ .|+.+++++..+ . ..++.+++||+++.+++++++
T Consensus 2 ~~vl-ItGas------~giG~~l---a~~L~~~G~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~D~~~~~~~~~~~ 65 (240)
T PRK06101 2 TAVL-ITGAT------SGIGKQL---ALDYAKQGWQVIACGRNQSVLDELHT----Q--SANIFTLAFDVTDHPGTKAAL 65 (240)
T ss_pred cEEE-EEcCC------cHHHHHH---HHHHHhCCCEEEEEECCHHHHHHHHH----h--cCCCeEEEeeCCCHHHHHHHH
Confidence 5677 99999 9999999 555667777765 488776655433 2 236788999999999999998
Q ss_pred HHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
+++.. .+|.+|+|||... ...+.+.+++++++++|+.+++.+++.++|.|.+ . ++||++||..+..+.
T Consensus 66 ~~~~~---~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~--~~iv~isS~~~~~~~--- 135 (240)
T PRK06101 66 SQLPF---IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--G--HRVVIVGSIASELAL--- 135 (240)
T ss_pred Hhccc---CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--C--CeEEEEechhhccCC---
Confidence 88742 4799999999753 2334677889999999999999999999999863 3 789999998776654
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhhccc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISRVR 260 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~~~ 260 (292)
+ +...|+++|++++.++++++.|+..+||++++++||++. ++...... ..
T Consensus 136 ---------~-------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~-------------~~ 186 (240)
T PRK06101 136 ---------P-------RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF-------------AM 186 (240)
T ss_pred ---------C-------CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC-------------CC
Confidence 2 567899999999999999999999999999999999999 87654311 11
Q ss_pred cccCCHHHhhc
Q psy4251 261 PVTNFQVDLTG 271 (292)
Q Consensus 261 ~~~~~~~~~a~ 271 (292)
+...++++.++
T Consensus 187 ~~~~~~~~~a~ 197 (240)
T PRK06101 187 PMIITVEQASQ 197 (240)
T ss_pred CcccCHHHHHH
Confidence 22357888877
No 180
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.94 E-value=3.4e-25 Score=190.02 Aligned_cols=221 Identities=13% Similarity=0.083 Sum_probs=168.9
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+|+++ ||||+ +|||+++ +..|++.|+.|+ .|+.+++++..+++. +.++.++++|++|.+++.++
T Consensus 2 ~k~il-ItGat------~~iG~~l---a~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~ 67 (257)
T PRK07074 2 KRTAL-VTGAA------GGIGQAL---ARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAA 67 (257)
T ss_pred CCEEE-EECCc------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHH
Confidence 56788 99999 9999999 555556676665 488888777776662 45788999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
++++.++++++|++|||+|... +..+.+.++|+..+++|+.+++.+++++++.+.+++. ++||++||..+....
T Consensus 68 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~-- 143 (257)
T PRK07074 68 LANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSR--GAVVNIGSVNGMAAL-- 143 (257)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--eEEEEEcchhhcCCC--
Confidence 9999999999999999999864 3455677889999999999999999999999987766 899999997554221
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhhc-
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISR- 258 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~- 258 (292)
+...|+.+|+++..+++++++++.+.||+|++++||++. ++....... ...+......
T Consensus 144 ------------------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~ 203 (257)
T PRK07074 144 ------------------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAA--NPQVFEELKKW 203 (257)
T ss_pred ------------------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhccccc--ChHHHHHHHhc
Confidence 456899999999999999999999899999999999999 765432111 1111111100
Q ss_pred -cccccCCHHHhhc------ccccCCCCCccc
Q psy4251 259 -VRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 259 -~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
...-+..+++.++ .+.....+|+++
T Consensus 204 ~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~ 235 (257)
T PRK07074 204 YPLQDFATPDDVANAVLFLASPAARAITGVCL 235 (257)
T ss_pred CCCCCCCCHHHHHHHHHHHcCchhcCcCCcEE
Confidence 1122467887776 333345567765
No 181
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.94 E-value=8.5e-26 Score=191.25 Aligned_cols=207 Identities=15% Similarity=0.115 Sum_probs=151.1
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
++++ ||||+ +|||+++++.+.+.. .++.++. |+... + ..+.++.+++||+++.++++++.
T Consensus 1 ~~vl-ItGas------~gIG~~ia~~l~~~~-~~~~v~~~~~~~~~--~--------~~~~~~~~~~~Dls~~~~~~~~~ 62 (235)
T PRK09009 1 MNIL-IVGGS------GGIGKAMVKQLLERY-PDATVHATYRHHKP--D--------FQHDNVQWHALDVTDEAEIKQLS 62 (235)
T ss_pred CEEE-EECCC------ChHHHHHHHHHHHhC-CCCEEEEEccCCcc--c--------cccCceEEEEecCCCHHHHHHHH
Confidence 3577 99999 999999966544331 2455553 33211 1 11357889999999999988854
Q ss_pred HHHHHhCCCccEEEEcccccCC--------CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 104 EEYQKKFRSLNILVLNAGVFGL--------GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~~--------~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
++++++|+||||||.... ..+.+.+.++..+++|+.+++.+++.++|.|.++.. ++|+++||..+.
T Consensus 63 ----~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~--~~i~~iss~~~~ 136 (235)
T PRK09009 63 ----EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSES--AKFAVISAKVGS 136 (235)
T ss_pred ----HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCC--ceEEEEeecccc
Confidence 445789999999998631 234566789999999999999999999999987766 899999986543
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC--CCeEEEEecCCccc-cccccccccCCccch
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK--YKIALSSRHCCWKI-TVSKKWWRFGTPVRT 252 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~--~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~ 252 (292)
... ..+.++..|+++|+++..|+++++.|+.+ .+|+|++|+||+++ ++.+..... .
T Consensus 137 ~~~----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-~---- 195 (235)
T PRK09009 137 ISD----------------NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQN-V---- 195 (235)
T ss_pred ccc----------------CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhhc-c----
Confidence 221 11225678999999999999999999976 58999999999999 887643211 0
Q ss_pred hhhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 253 FSWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 253 ~~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
...-..+|++.|. .......+|.++
T Consensus 196 ------~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~ 226 (235)
T PRK09009 196 ------PKGKLFTPEYVAQCLLGIIANATPAQSGSFL 226 (235)
T ss_pred ------ccCCCCCHHHHHHHHHHHHHcCChhhCCcEE
Confidence 0111358888887 333345678876
No 182
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.94 E-value=3.4e-25 Score=189.29 Aligned_cols=185 Identities=14% Similarity=0.171 Sum_probs=154.3
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--c-CHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--N-CWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++++++++ ||||+ +|||.++ +.+|+++|+.++. | +.+...+....+.+. +.++.++++|++++++
T Consensus 3 ~~~~~~vl-itGas------g~iG~~l---~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~ 70 (252)
T PRK06077 3 SLKDKVVV-VTGSG------RGIGRAI---AVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREG 70 (252)
T ss_pred CCCCcEEE-EeCCC------ChHHHHH---HHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHH
Confidence 46788999 99999 9999999 5556677877653 3 445555555556554 4578889999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+.++++++.+.++++|+||||||... +..+.+.+.++..+++|+.+++.+++++.|.+++ . ++||++||..+..
T Consensus 71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~--~~iv~~sS~~~~~ 146 (252)
T PRK06077 71 CETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--G--GAIVNIASVAGIR 146 (252)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--C--cEEEEEcchhccC
Confidence 99999999999999999999999853 3455677788999999999999999999999875 3 8999999987765
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+. + +...|+++|++++.+++++++++.+ +|+++.+.||++. ++...
T Consensus 147 ~~------------~-------~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~ 193 (252)
T PRK06077 147 PA------------Y-------GLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGES 193 (252)
T ss_pred CC------------C-------CchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHh
Confidence 43 2 6789999999999999999999987 8999999999999 76544
No 183
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.94 E-value=1.6e-25 Score=207.17 Aligned_cols=226 Identities=20% Similarity=0.154 Sum_probs=168.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
..++|++++ |||++ +|||+++ +..+.+.|+.|++.+.....+..+++.+.. ...++++|+++.++++
T Consensus 206 ~~~~g~~vl-ItGas------ggIG~~l---a~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~~~~~~~Dv~~~~~~~ 272 (450)
T PRK08261 206 RPLAGKVAL-VTGAA------RGIGAAI---AEVLARDGAHVVCLDVPAAGEALAAVANRV---GGTALALDITAPDAPA 272 (450)
T ss_pred cCCCCCEEE-EecCC------CHHHHHH---HHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEeCCCHHHHH
Confidence 456789999 99999 9999999 555667788877522111112222222221 2357899999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
++++.+.++++++|+||||||+.. ...+.+.++|+..+++|+.+++.+++++++.+..+.. ++||++||..+..+.
T Consensus 273 ~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--g~iv~~SS~~~~~g~ 350 (450)
T PRK08261 273 RIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDG--GRIVGVSSISGIAGN 350 (450)
T ss_pred HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCC--CEEEEECChhhcCCC
Confidence 999999999999999999999863 3456788999999999999999999999996554455 899999998877654
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhh
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWIS 257 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~ 257 (292)
+ +...|+++|+++..|+++++.++..+||++|+|+||+++ ++.+..+.. .......+
T Consensus 351 ------------~-------~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~--~~~~~~~~- 408 (450)
T PRK08261 351 ------------R-------GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA--TREAGRRM- 408 (450)
T ss_pred ------------C-------CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh--HHHHHhhc-
Confidence 2 677899999999999999999999999999999999999 877654221 00111111
Q ss_pred ccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 258 RVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 258 ~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
........|++.++ ++.....+|+.+
T Consensus 409 ~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i 440 (450)
T PRK08261 409 NSLQQGGLPVDVAETIAWLASPASGGVTGNVV 440 (450)
T ss_pred CCcCCCCCHHHHHHHHHHHhChhhcCCCCCEE
Confidence 01112356777776 445556677654
No 184
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.94 E-value=7.3e-25 Score=187.50 Aligned_cols=184 Identities=15% Similarity=0.100 Sum_probs=155.4
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+|+++ ||||+ ++||+.+ +..|.++|+.|+ .|+.+..++..+++... +.++.++++|+++.+++.++
T Consensus 1 ~~~vl-ItGa~------g~lG~~l---~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~ 68 (255)
T TIGR01963 1 GKTAL-VTGAA------SGIGLAI---ALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADM 68 (255)
T ss_pred CCEEE-EcCCc------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHH
Confidence 46777 99999 9999999 555667777665 48888777777776544 45789999999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
++++.+.++++|++|||||... +..+.+.++++.++++|+.+++.+++.+++.+.+... ++||++||..+..+.
T Consensus 69 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~-- 144 (255)
T TIGR01963 69 IAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGW--GRIINIASAHGLVAS-- 144 (255)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--eEEEEEcchhhcCCC--
Confidence 9999998899999999999864 2345577889999999999999999999999987766 899999998665543
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+ ....|+.+|++++.++++++.++...+|+++.++||.+. ++.+
T Consensus 145 ----------~-------~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~ 189 (255)
T TIGR01963 145 ----------P-------FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE 189 (255)
T ss_pred ----------C-------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH
Confidence 2 567899999999999999999998889999999999998 7653
No 185
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.94 E-value=7.6e-25 Score=186.15 Aligned_cols=188 Identities=20% Similarity=0.221 Sum_probs=159.0
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++.+++++ ||||+ +|||..+ +..+.++|+.|+ .|+.++.+...+++... +.++.++++|+++++++
T Consensus 2 ~~~~~~il-ItGas------g~iG~~l---~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 69 (246)
T PRK05653 2 SLQGKTAL-VTGAS------RGIGRAI---ALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAV 69 (246)
T ss_pred CCCCCEEE-EECCC------cHHHHHH---HHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHH
Confidence 45678888 99999 9999999 555556676665 48888887777777654 56899999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++++...++++|++||+||... +..+.+.++++..+++|+.+.+.+++++.|++.+... ++||++||..+..+
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~ii~~ss~~~~~~ 147 (246)
T PRK05653 70 RALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARY--GRIVNISSVSGVTG 147 (246)
T ss_pred HHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--cEEEEECcHHhccC
Confidence 9999999888899999999999863 3456678889999999999999999999999987766 89999999866544
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
. . +...|+.+|.+++.+++++++++.+.|+++++++||.+. ++...
T Consensus 148 ~------------~-------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~ 194 (246)
T PRK05653 148 N------------P-------GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG 194 (246)
T ss_pred C------------C-------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh
Confidence 3 2 567899999999999999999998889999999999998 76643
No 186
>KOG1210|consensus
Probab=99.94 E-value=5.4e-25 Score=185.38 Aligned_cols=214 Identities=17% Similarity=0.066 Sum_probs=173.3
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
++++ |||++ +|||+++|+.+..- ++...++.|+.++++++..++.-...-..+.+..+|++|.+++..++++
T Consensus 34 ~hi~-itggS------~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~ 105 (331)
T KOG1210|consen 34 RHIL-ITGGS------SGLGLALALECKRE-GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEE 105 (331)
T ss_pred ceEE-EecCc------chhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhh
Confidence 6777 99999 99999996664432 3345556799999999999886554334577999999999999999999
Q ss_pred HHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccccccCCCC
Q psy4251 106 YQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHRYSYITKD 182 (292)
Q Consensus 106 ~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~~~~~~~~ 182 (292)
++...+++|.+|+|||..- -+.+.+.+.++..+++|++++++++++.++.|++.. . |+|+.+||.++..+-
T Consensus 106 l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~--g~I~~vsS~~a~~~i---- 179 (331)
T KOG1210|consen 106 LRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHL--GRIILVSSQLAMLGI---- 179 (331)
T ss_pred hhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccC--cEEEEehhhhhhcCc----
Confidence 9999999999999999873 467889999999999999999999999999998765 4 799999999988876
Q ss_pred CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhhcccc
Q psy4251 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISRVRP 261 (292)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~~~~ 261 (292)
. +..+|..+|+|+.+++.++++|+.+.||+|....|+.+. +.+..-... +.....+++...
T Consensus 180 --------~-------GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~t---kP~~t~ii~g~s 241 (331)
T KOG1210|consen 180 --------Y-------GYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKT---KPEETKIIEGGS 241 (331)
T ss_pred --------c-------cccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccccc---CchheeeecCCC
Confidence 3 889999999999999999999999999999999999999 655443221 111222222222
Q ss_pred ccCCHHHhhc
Q psy4251 262 VTNFQVDLTG 271 (292)
Q Consensus 262 ~~~~~~~~a~ 271 (292)
-..++||.|.
T Consensus 242 s~~~~e~~a~ 251 (331)
T KOG1210|consen 242 SVIKCEEMAK 251 (331)
T ss_pred CCcCHHHHHH
Confidence 3467777765
No 187
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.94 E-value=1.9e-25 Score=184.47 Aligned_cols=156 Identities=12% Similarity=0.035 Sum_probs=129.6
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ +|||+++++. |.++ ..|+. |+.+ .++||+++.++++++++
T Consensus 2 ~vl-ItGas------~giG~~la~~---l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~ 51 (199)
T PRK07578 2 KIL-VIGAS------GTIGRAVVAE---LSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFE 51 (199)
T ss_pred eEE-EEcCC------cHHHHHHHHH---HHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHH
Confidence 566 99999 9999999655 4444 45543 4421 46899999999999877
Q ss_pred HHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD 182 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~ 182 (292)
+ .+++|+||||||... +..+.+.++|++++++|+.+++.+++.++|+|.+ . ++|+++||..+..+.
T Consensus 52 ~----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~--g~iv~iss~~~~~~~---- 119 (199)
T PRK07578 52 K----VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--G--GSFTLTSGILSDEPI---- 119 (199)
T ss_pred h----cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--C--CeEEEEcccccCCCC----
Confidence 5 378999999999753 3456788899999999999999999999999974 3 899999998776543
Q ss_pred CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
+ +...|+++|+++.+|+++++.|+ ++||+||+|+||+++ ++.
T Consensus 120 --------~-------~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~ 162 (199)
T PRK07578 120 --------P-------GGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLE 162 (199)
T ss_pred --------C-------CchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchh
Confidence 2 67789999999999999999999 789999999999999 764
No 188
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.94 E-value=1.3e-24 Score=184.16 Aligned_cols=185 Identities=18% Similarity=0.177 Sum_probs=155.9
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
+.+++++ ||||+ ++||.++++. |+..|+.|+ +|+.+++++..+++.+. .++.++++|+++.+++.
T Consensus 4 ~~~~~il-ItGat------g~iG~~la~~---l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~ 70 (237)
T PRK07326 4 LKGKVAL-ITGGS------KGIGFAIAEA---LLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQ 70 (237)
T ss_pred CCCCEEE-EECCC------CcHHHHHHHH---HHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHH
Confidence 4578899 99999 9999999554 556676665 58888888887777543 47889999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
++++++.+.++++|++|||+|... +..+.+.++++.++++|+.+++.+++++++.+. ... ++||++||..+..+.
T Consensus 71 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--~~iv~~ss~~~~~~~ 147 (237)
T PRK07326 71 RAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGG--GYIINISSLAGTNFF 147 (237)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCC--eEEEEECChhhccCC
Confidence 999999999999999999999763 345678888999999999999999999999984 344 899999998665433
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
. +...|+.+|+++..+++.++.++...|+++++|+||.+. ++...
T Consensus 148 ------------~-------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~ 193 (237)
T PRK07326 148 ------------A-------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH 193 (237)
T ss_pred ------------C-------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc
Confidence 2 466899999999999999999998889999999999998 76544
No 189
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.93 E-value=9.5e-25 Score=185.77 Aligned_cols=219 Identities=16% Similarity=0.147 Sum_probs=162.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++|++++ |||++ +|||..+ +..++..|+.|+ .|+.+++++..++. ...++.+|+++.++
T Consensus 5 ~~~~~~~~l-ItGa~------g~iG~~~---a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~ 67 (245)
T PRK07060 5 FDFSGKSVL-VTGAS------SGIGRAC---AVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAA 67 (245)
T ss_pred cccCCCEEE-EeCCc------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHH
Confidence 457899999 99999 9999999 555566676665 47776665544322 35578899999998
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~ 175 (292)
+.++++. .+++|++|||||... +..+.+.+++++.+++|+.+++.+++++++.+.+.. . ++||++||..+.
T Consensus 68 v~~~~~~----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~iv~~sS~~~~ 141 (245)
T PRK07060 68 IRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRG--GSIVNVSSQAAL 141 (245)
T ss_pred HHHHHHH----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--cEEEEEccHHHc
Confidence 8887765 468999999999863 344567788999999999999999999999987543 4 799999998776
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccccccCC-ccchh
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRFGT-PVRTF 253 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~-~~~~~ 253 (292)
.+. + ....|+.+|++++.++++++.++.+.||++++++||++. ++.+..+.... ...+.
T Consensus 142 ~~~------------~-------~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~ 202 (245)
T PRK07060 142 VGL------------P-------DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPML 202 (245)
T ss_pred CCC------------C-------CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHH
Confidence 553 2 567899999999999999999998889999999999999 87653222100 00111
Q ss_pred hhhhccccccCCHHHhhc------ccccCCCCCccc
Q psy4251 254 SWISRVRPVTNFQVDLTG------TAEKVGLSGLPD 283 (292)
Q Consensus 254 ~~~~~~~~~~~~~~~~a~------~~~~~~~~G~~~ 283 (292)
... ...-..++++.++ .+.....+|+++
T Consensus 203 ~~~--~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~ 236 (245)
T PRK07060 203 AAI--PLGRFAEVDDVAAPILFLLSDAASMVSGVSL 236 (245)
T ss_pred hcC--CCCCCCCHHHHHHHHHHHcCcccCCccCcEE
Confidence 111 1112467888887 334456677765
No 190
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.93 E-value=4.8e-25 Score=185.53 Aligned_cols=179 Identities=17% Similarity=0.142 Sum_probs=142.8
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|+++ |||++ +|||.++ +..|++.|..|++ |+.+..++. .+. .++.+..+|++|.+++++++
T Consensus 2 k~vl-ItG~s------g~iG~~l---a~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~~D~~d~~~~~~~~ 64 (225)
T PRK08177 2 RTAL-IIGAS------RGLGLGL---VDRLLERGWQVTATVRGPQQDTAL----QAL---PGVHIEKLDMNDPASLDQLL 64 (225)
T ss_pred CEEE-EeCCC------chHHHHH---HHHHHhCCCEEEEEeCCCcchHHH----Hhc---cccceEEcCCCCHHHHHHHH
Confidence 5677 99999 9999999 5556677877764 665554332 221 25677899999999999999
Q ss_pred HHHHHhCCCccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
+.+.. +++|+||||||+.. +..+.+.++++..+++|+.+++.+++.++|.+.++ . ++|+++||..+..+..
T Consensus 65 ~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~--~~iv~~ss~~g~~~~~ 139 (225)
T PRK08177 65 QRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-Q--GVLAFMSSQLGSVELP 139 (225)
T ss_pred HHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-C--CEEEEEccCccccccC
Confidence 98854 47999999999863 24566788999999999999999999999998754 3 7899999875544321
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
.......|+++|++++.++++++.++..+||+||+|+||+++ ++...
T Consensus 140 ----------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~ 187 (225)
T PRK08177 140 ----------------DGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD 187 (225)
T ss_pred ----------------CCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence 011456799999999999999999999999999999999999 87654
No 191
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.93 E-value=2.1e-24 Score=183.63 Aligned_cols=188 Identities=19% Similarity=0.188 Sum_probs=156.8
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+..|+++ ||||+ ++||.++ +..|.++|+.|+. ++.+..+...+.+... +.++.++++|+++++++
T Consensus 4 ~~~~~vl-ItGas------g~iG~~l---~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v 71 (249)
T PRK12825 4 LMGRVAL-VTGAA------RGLGRAI---ALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAAL 71 (249)
T ss_pred CCCCEEE-EeCCC------chHHHHH---HHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHH
Confidence 4567888 99999 9999999 5556677877653 3454555555555544 45788999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++++.+.++++|++||+||... +..+.+.++++..+++|+.+.+.+++.+.|++.+.+. +++|++||..+..+
T Consensus 72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~i~~SS~~~~~~ 149 (249)
T PRK12825 72 EAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRG--GRIVNISSVAGLPG 149 (249)
T ss_pred HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--CEEEEECccccCCC
Confidence 9999999988899999999999763 2345678889999999999999999999999987766 89999999876654
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
. . +...|+.+|+++..+++.+++++...|++++.++||.+. ++....
T Consensus 150 ~------------~-------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~ 197 (249)
T PRK12825 150 W------------P-------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT 197 (249)
T ss_pred C------------C-------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc
Confidence 3 2 567899999999999999999998889999999999999 776553
No 192
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.93 E-value=6.3e-25 Score=185.68 Aligned_cols=173 Identities=13% Similarity=0.068 Sum_probs=144.0
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.+|+++ ||||+ +|||+.+ +..+++.|+.|+. |+.+. .. ...++++|+++.+++.+
T Consensus 2 ~~k~vl-ItG~s------~~iG~~i---a~~l~~~G~~v~~~~r~~~~----------~~---~~~~~~~D~~~~~~~~~ 58 (234)
T PRK07577 2 SSRTVL-VTGAT------KGIGLAL---SLRLANLGHQVIGIARSAID----------DF---PGELFACDLADIEQTAA 58 (234)
T ss_pred CCCEEE-EECCC------CcHHHHH---HHHHHHCCCEEEEEeCCccc----------cc---CceEEEeeCCCHHHHHH
Confidence 478888 99999 9999999 5556677877764 55432 11 12468999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
+++++.+.+ ++|++|||||... +..+.+.++++.++++|+.+++.+++.++|.|++++. ++||++||.... +.
T Consensus 59 ~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~~sS~~~~-~~- 133 (234)
T PRK07577 59 TLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQ--GRIVNICSRAIF-GA- 133 (234)
T ss_pred HHHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--cEEEEEcccccc-CC-
Confidence 999998876 5899999999864 3455678899999999999999999999999987766 899999998533 22
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ ....|+++|++++.++++++.++.+.||++++|+||++. ++.+.
T Consensus 134 -----------~-------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~ 179 (234)
T PRK07577 134 -----------L-------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQ 179 (234)
T ss_pred -----------C-------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence 2 467899999999999999999999889999999999999 87654
No 193
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.93 E-value=9.9e-25 Score=186.45 Aligned_cols=181 Identities=18% Similarity=0.165 Sum_probs=144.9
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCH-HHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCW-DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
|+++ ||||+ +|||+++ +.+|+++|+.|+. |+. +.+++ +.+.. +.++.++++|+++.++++++
T Consensus 2 k~vl-ItGas------ggiG~~i---a~~l~~~g~~V~~~~r~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~ 66 (251)
T PRK06924 2 RYVI-ITGTS------QGLGEAI---ANQLLEKGTHVISISRTENKELTK----LAEQY-NSNLTFHSLDLQDVHELETN 66 (251)
T ss_pred cEEE-EecCC------chHHHHH---HHHHHhcCCEEEEEeCCchHHHHH----HHhcc-CCceEEEEecCCCHHHHHHH
Confidence 5677 99999 9999999 6667677877664 654 33332 22222 45788999999999999999
Q ss_pred HHHHHHhCCC--c--cEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhc-CCCCcEEEEEcCccc
Q psy4251 103 AEEYQKKFRS--L--NILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKG-AKLFARVVVVSSESH 174 (292)
Q Consensus 103 ~~~~~~~~~~--i--d~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~-~~~~~~iV~vsS~~~ 174 (292)
++++.+.++. + +++|+|||... ++.+.+.++++.++++|+.+++.+++.++|.+.+. .. ++||++||..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~ 144 (251)
T PRK06924 67 FNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVD--KRVINISSGAA 144 (251)
T ss_pred HHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCC--ceEEEecchhh
Confidence 9999876653 2 28999999853 45677889999999999999999999999999764 34 79999999866
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc--CCCeEEEEecCCccc-ccccc
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY--KYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~gi~v~~v~PG~v~-~~~~~ 242 (292)
..+. + +...|+.+|++++.+++.++.++. +.||+|++|+||+++ ++...
T Consensus 145 ~~~~------------~-------~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~ 196 (251)
T PRK06924 145 KNPY------------F-------GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQ 196 (251)
T ss_pred cCCC------------C-------CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHH
Confidence 5443 2 678999999999999999999975 458999999999999 87654
No 194
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.93 E-value=2.1e-24 Score=182.75 Aligned_cols=185 Identities=17% Similarity=0.152 Sum_probs=156.0
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ ++||..+ +..++++|+.|+ .|+.++..+..+++... .+.++.+|++|.+++
T Consensus 4 ~~~~k~vl-ItGat------g~iG~~l---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~ 69 (239)
T PRK12828 4 SLQGKVVA-ITGGF------GGLGRAT---AAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAA 69 (239)
T ss_pred CCCCCEEE-EECCC------CcHhHHH---HHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHH
Confidence 46789998 99999 9999999 455556676665 48877777766666533 466788999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++++.+.++++|+|||++|... +..+.+.+++++.+++|+.+++.++++++|.+.+++. ++||++||..+..+
T Consensus 70 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~ 147 (239)
T PRK12828 70 RRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGG--GRIVNIGAGAALKA 147 (239)
T ss_pred HHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCC--CEEEEECchHhccC
Confidence 9999999999999999999999763 3345678889999999999999999999999987766 89999999876654
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
. + +...|+.+|.++..+++.++.++...||+++.+.||.+. ++..
T Consensus 148 ~------------~-------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~ 193 (239)
T PRK12828 148 G------------P-------GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNR 193 (239)
T ss_pred C------------C-------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchh
Confidence 3 2 567899999999999999999998889999999999999 7543
No 195
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.93 E-value=1.1e-24 Score=186.66 Aligned_cols=179 Identities=15% Similarity=0.113 Sum_probs=148.9
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+|+++ ||||+ +|||+++ +..|...|+.|++ |+.+..++..+..... +.++.++++|++|.+++.++
T Consensus 2 ~~~vl-VtGas------g~iG~~i---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~ 69 (257)
T PRK09291 2 SKTIL-ITGAG------SGFGREV---ALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQA 69 (257)
T ss_pred CCEEE-EeCCC------CHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHH
Confidence 56788 99999 9999999 5556677877764 7877777766665544 44688999999999988776
Q ss_pred HHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
++ .++|+||||||... +..+.+.++++..+++|+.+++.+++.+++.+.++.. ++||++||..+..+.
T Consensus 70 ~~------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~~SS~~~~~~~-- 139 (257)
T PRK09291 70 AE------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGK--GKVVFTSSMAGLITG-- 139 (257)
T ss_pred hc------CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--ceEEEEcChhhccCC--
Confidence 43 37999999999863 4566788899999999999999999999999987776 899999998766543
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+++|++++.++++++.++.+.||++++|+||++. ++.+.
T Consensus 140 ----------~-------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~ 185 (257)
T PRK09291 140 ----------P-------FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT 185 (257)
T ss_pred ----------C-------CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhh
Confidence 2 567899999999999999999998889999999999998 77543
No 196
>PRK09135 pteridine reductase; Provisional
Probab=99.93 E-value=7.6e-24 Score=180.48 Aligned_cols=185 Identities=16% Similarity=0.115 Sum_probs=150.1
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC-HHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC-WDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.++++++ ||||+ +|||+.+ +.+|++.|+.|++ |+ .+..++..+++.+.. ...+.++++|+++.+++
T Consensus 4 ~~~~~vl-ItGa~------g~iG~~l---~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~ 72 (249)
T PRK09135 4 DSAKVAL-ITGGA------RRIGAAI---ARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDAL 72 (249)
T ss_pred CCCCEEE-EeCCC------chHHHHH---HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHH
Confidence 4578888 99999 9999999 5556677877764 53 555666666665442 34688999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++++.+.++++|+||||||... +..+.+.++++..+++|+.+++.+++++.|.+.++. +++++++|..+..+
T Consensus 73 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~ 149 (249)
T PRK09135 73 PELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR---GAIVNITDIHAERP 149 (249)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC---eEEEEEeChhhcCC
Confidence 9999999999999999999999753 344556778999999999999999999999987653 78888877544332
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
. ++...|+.||++++.+++++++++.+ +++++++.||++. +...
T Consensus 150 ~-------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~ 194 (249)
T PRK09135 150 L-------------------KGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDG 194 (249)
T ss_pred C-------------------CCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCcccc
Confidence 2 26778999999999999999999965 6999999999999 7654
No 197
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.93 E-value=3.9e-24 Score=182.49 Aligned_cols=187 Identities=18% Similarity=0.099 Sum_probs=147.6
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCH-HHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCW-DKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
+++||+++ ||||+ +|||+++ +.+|.+.|+.|+ .|+. +..+.+.+++... +.++.++++|++++++
T Consensus 3 ~~~~k~vl-ItGas------ggiG~~l---~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~ 70 (248)
T PRK07806 3 DLPGKTAL-VTGSS------RGIGADT---AKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEES 70 (248)
T ss_pred CCCCcEEE-EECCC------CcHHHHH---HHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence 46789999 99999 9999999 555667787765 4654 4566666666554 4578899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
+.++++++.+.++++|++|||||.... ...+++..+++|+.+++.+++.+.|.|.+ . ++||++||..+....
T Consensus 71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~----~~~~~~~~~~vn~~~~~~l~~~~~~~~~~--~--~~iv~isS~~~~~~~ 142 (248)
T PRK07806 71 VAALMDTAREEFGGLDALVLNASGGME----SGMDEDYAMRLNRDAQRNLARAALPLMPA--G--SRVVFVTSHQAHFIP 142 (248)
T ss_pred HHHHHHHHHHhCCCCcEEEECCCCCCC----CCCCcceeeEeeeHHHHHHHHHHHhhccC--C--ceEEEEeCchhhcCc
Confidence 999999999988999999999986421 12235678999999999999999998853 3 799999996543211
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
. ....+....|+.||++++.++++++.++...||+|++|.||.+. ++...
T Consensus 143 ~--------------~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~ 193 (248)
T PRK07806 143 T--------------VKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT 193 (248)
T ss_pred c--------------ccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh
Confidence 0 01111356899999999999999999999999999999999998 76543
No 198
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.93 E-value=6e-24 Score=180.04 Aligned_cols=181 Identities=19% Similarity=0.261 Sum_probs=151.3
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC-HHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC-WDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEY 106 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~ 106 (292)
||||++ ++||..++ ..|.++|+.|++ |+ .+..++..+++.+. +.++.++++|++|.++++++++++
T Consensus 2 lItG~~------g~iG~~la---~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 70 (239)
T TIGR01830 2 LVTGAS------RGIGRAIA---LKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEI 70 (239)
T ss_pred EEECCC------cHHHHHHH---HHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHH
Confidence 499999 99999994 456677777664 54 35555666666544 457899999999999999999999
Q ss_pred HHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCC
Q psy4251 107 QKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTI 184 (292)
Q Consensus 107 ~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~ 184 (292)
.+.++++|+||||||... +..+.+.++++..+++|+.+++.+++.+++.+.+... +++|++||.++..+.
T Consensus 71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~v~~sS~~~~~g~------ 142 (239)
T TIGR01830 71 EEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRS--GRIINISSVVGLMGN------ 142 (239)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--eEEEEECCccccCCC------
Confidence 999999999999999863 3455677889999999999999999999999876655 899999998776654
Q ss_pred CccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 185 SKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+.+|+++..+++.+++++...|++++.++||.+. ++...
T Consensus 143 ------~-------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~ 188 (239)
T TIGR01830 143 ------A-------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK 188 (239)
T ss_pred ------C-------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh
Confidence 2 567899999999999999999998889999999999998 76543
No 199
>PRK08324 short chain dehydrogenase; Validated
Probab=99.92 E-value=4.6e-24 Score=206.15 Aligned_cols=188 Identities=17% Similarity=0.167 Sum_probs=160.7
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
...+.||+++ ||||+ +|||+++++ .+.+.|..|+ .|+.++++...+++... .++.++++|+++.+
T Consensus 417 ~~~l~gk~vL-VTGas------ggIG~~la~---~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~ 483 (681)
T PRK08324 417 PKPLAGKVAL-VTGAA------GGIGKATAK---RLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEA 483 (681)
T ss_pred CcCCCCCEEE-EecCC------CHHHHHHHH---HHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHH
Confidence 4567899999 99999 999999954 4556676665 48888887777776543 47889999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESH 174 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~ 174 (292)
++.++++++.+.++++|++|||||... +..+.+.++|+..+++|+.+++.+++.+.+.+++++ . ++||++||..+
T Consensus 484 ~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~--g~iV~vsS~~~ 561 (681)
T PRK08324 484 AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLG--GSIVFIASKNA 561 (681)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--cEEEEECCccc
Confidence 999999999999999999999999863 456678899999999999999999999999998754 4 79999999877
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCcc--c-cccc
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWK--I-TVSK 241 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v--~-~~~~ 241 (292)
..+. + +...|+++|++++.++++++.++.+.||++|.|+||.| . ++..
T Consensus 562 ~~~~------------~-------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~ 612 (681)
T PRK08324 562 VNPG------------P-------NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT 612 (681)
T ss_pred cCCC------------C-------CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc
Confidence 6554 2 57789999999999999999999999999999999999 6 5543
No 200
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.92 E-value=1.2e-23 Score=178.27 Aligned_cols=184 Identities=15% Similarity=0.053 Sum_probs=151.0
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ ||||+ +|||..+ +..+.+.|+.|+ .|+.++.++..+++.+. .++.++++|+++.+++
T Consensus 2 ~~~~~~vl-ItGa~------g~iG~~~---a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~ 68 (238)
T PRK05786 2 RLKGKKVA-IIGVS------EGLGYAV---AYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESA 68 (238)
T ss_pred CcCCcEEE-EECCC------chHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHH
Confidence 46789999 99999 9999999 555667787776 48877777666666542 3688899999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
.++++++...++++|.+|+|+|........+.++++..+++|+.+++.+.+.++|.+.+ . +++|++||..+.....
T Consensus 69 ~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~--~~iv~~ss~~~~~~~~ 144 (238)
T PRK05786 69 RNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE--G--SSIVLVSSMSGIYKAS 144 (238)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc--C--CEEEEEecchhcccCC
Confidence 99999998888999999999987532222234788999999999999999999999864 3 8999999976543211
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
+ ....|+.+|+++..++++++.++...||+++.++||++. ++.
T Consensus 145 -----------~-------~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~ 188 (238)
T PRK05786 145 -----------P-------DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE 188 (238)
T ss_pred -----------C-------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence 1 456899999999999999999998889999999999999 764
No 201
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.92 E-value=1e-23 Score=181.39 Aligned_cols=188 Identities=19% Similarity=0.188 Sum_probs=153.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++++++++ ||||+ +|||+.+ +..|.++|+.|+ .|+.+..++..+++. +.++.++.+|++++++
T Consensus 7 ~~~~~~~vl-ItGa~------g~iG~~~---a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~ 72 (264)
T PRK12829 7 KPLDGLRVL-VTGGA------SGIGRAI---AEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQ 72 (264)
T ss_pred hccCCCEEE-EeCCC------CcHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHH
Confidence 346789999 99999 9999999 555667777765 477766666555443 2267889999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+.++++++.+.++++|+||||||... +....+.+++++++++|+.+++.+++.+++.+...+. .++|+++||..+.
T Consensus 73 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~vv~~ss~~~~ 151 (264)
T PRK12829 73 VERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH-GGVIIALSSVAGR 151 (264)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CeEEEEecccccc
Confidence 99999999998899999999999863 2455678899999999999999999999998876431 0568888887655
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
.+. + ....|+.+|++++.+++.+++++...++++++++||++. ++...
T Consensus 152 ~~~------------~-------~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~ 200 (264)
T PRK12829 152 LGY------------P-------GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR 200 (264)
T ss_pred cCC------------C-------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH
Confidence 443 2 556899999999999999999998889999999999998 66543
No 202
>KOG1478|consensus
Probab=99.92 E-value=1.6e-24 Score=176.58 Aligned_cols=198 Identities=19% Similarity=0.200 Sum_probs=164.5
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC--cEEE--EcCHHHHHHHHHHHHhhCC--CCceEEEEccCCChHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS--KLFY--QNCWDKANDAISKILTEKP--SAQCIAMELDLCRLKSV 99 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g--~~v~--~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v 99 (292)
|+++ |||++ +|||++++..+++.-... .+++ +|+.+++++++.+|.+.+| ..++.++++|++++.|+
T Consensus 4 Kval-ITGan------SglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv 76 (341)
T KOG1478|consen 4 KVAL-ITGAN------SGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSV 76 (341)
T ss_pred eEEE-EecCC------CcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHH
Confidence 4556 99999 999999966655553332 3333 6999999999999999998 56899999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccCCC-----------------------------CCCCCcchhhhhhhhhhHHHHHHH
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFGLG-----------------------------FSHTEDGFETTFQVNHLAHFYLTL 150 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~~~-----------------------------~~~~~~~~~~~~~vN~~~~~~l~~ 150 (292)
.++..+++++|.++|.+..|||++..+ ..++.|++...|++|++|+|.+++
T Consensus 77 ~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~ 156 (341)
T KOG1478|consen 77 FRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIR 156 (341)
T ss_pred HHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHh
Confidence 999999999999999999999965211 135789999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEE
Q psy4251 151 QLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSS 230 (292)
Q Consensus 151 ~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~ 230 (292)
.+.|++-.+.. ..+|++||..+.... ++++|+.- ..+...|..||.+...+.-++-+.+.+.|+.-.+
T Consensus 157 ~l~pll~~~~~--~~lvwtSS~~a~kk~-----lsleD~q~-----~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyv 224 (341)
T KOG1478|consen 157 ELEPLLCHSDN--PQLVWTSSRMARKKN-----LSLEDFQH-----SKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYV 224 (341)
T ss_pred hhhhHhhcCCC--CeEEEEeeccccccc-----CCHHHHhh-----hcCCCCcchhHHHHHHHHHHHhccccccchhhhc
Confidence 99999987766 799999998877655 34444432 2255679999999999999999999999999999
Q ss_pred ecCCccc-ccccc
Q psy4251 231 RHCCWKI-TVSKK 242 (292)
Q Consensus 231 v~PG~v~-~~~~~ 242 (292)
++||..- ++...
T Consensus 225 v~pg~~tt~~~~~ 237 (341)
T KOG1478|consen 225 VQPGIFTTNSFSE 237 (341)
T ss_pred ccCceeecchhhh
Confidence 9999887 66554
No 203
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.92 E-value=3.7e-24 Score=182.25 Aligned_cols=174 Identities=17% Similarity=0.119 Sum_probs=125.9
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
...++||+++ ||||+ +|||+++ +.+++.+|+.|+. |+.....+ .. .. . ...++++|+++.+
T Consensus 9 ~~~l~~k~~l-ITGas------~gIG~al---a~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~-~~~~~~~D~~~~~ 71 (245)
T PRK12367 9 QSTWQGKRIG-ITGAS------GALGKAL---TKAFRAKGAKVIGLTHSKINNSE---SN-DE--S-PNEWIKWECGKEE 71 (245)
T ss_pred HHhhCCCEEE-EEcCC------cHHHHHH---HHHHHHCCCEEEEEECCchhhhh---hh-cc--C-CCeEEEeeCCCHH
Confidence 3567899999 99999 9999999 6667788888764 55421111 11 11 1 2257899999998
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC--CCCcEEEEEcCcccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA--KLFARVVVVSSESHR 175 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~--~~~~~iV~vsS~~~~ 175 (292)
++.+ .++++|++|||||+.. ..+.+.+++++.+++|+.+++.+++.++|.|.++. . .+.+++.+|.++.
T Consensus 72 ~~~~-------~~~~iDilVnnAG~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~-g~~iiv~ss~a~~ 142 (245)
T PRK12367 72 SLDK-------QLASLDVLILNHGINP-GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQI-PKEIWVNTSEAEI 142 (245)
T ss_pred HHHH-------hcCCCCEEEECCccCC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCC-CeEEEEEeccccc
Confidence 8754 3578999999999753 33457889999999999999999999999997631 2 0344444554433
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHH---HHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLF---GEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~---~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
.+ + ....|++||+++..+ .++++.++...|++|+.++||.++ ++
T Consensus 143 ~~-------------~-------~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~ 190 (245)
T PRK12367 143 QP-------------A-------LSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL 190 (245)
T ss_pred CC-------------C-------CCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc
Confidence 21 1 346799999998544 345555667789999999999998 76
No 204
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.92 E-value=3.1e-24 Score=182.61 Aligned_cols=176 Identities=20% Similarity=0.158 Sum_probs=143.0
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ +|||+++ +..|++.|+.|+. |+.++ +. ... .+.++.++++|+++.++++++++
T Consensus 3 ~vl-ItGas------ggiG~~i---a~~l~~~G~~v~~~~r~~~~--~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~ 65 (243)
T PRK07023 3 RAI-VTGHS------RGLGAAL---AEQLLQPGIAVLGVARSRHP--SL----AAA-AGERLAEVELDLSDAAAAAAWLA 65 (243)
T ss_pred eEE-EecCC------cchHHHH---HHHHHhCCCEEEEEecCcch--hh----hhc-cCCeEEEEEeccCCHHHHHHHHH
Confidence 567 99999 9999999 5556677777653 65432 11 111 14578899999999999999877
Q ss_pred H-HHHhC---CCccEEEEcccccC---CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 105 E-YQKKF---RSLNILVLNAGVFG---LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 105 ~-~~~~~---~~id~lI~nAg~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
+ +.+.+ +++|++|||||... +..+.+.++++..+++|+.+++.+++.+++.+.++.. ++||++||..+..+
T Consensus 66 ~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~isS~~~~~~ 143 (243)
T PRK07023 66 GDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAE--RRILHISSGAARNA 143 (243)
T ss_pred HHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCC--CEEEEEeChhhcCC
Confidence 6 55444 47999999999863 3456678899999999999999999999999987666 89999999876654
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
. + +...|+.+|++++++++.++.+ ...||++++|+||+++ ++..
T Consensus 144 ~------------~-------~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~ 188 (243)
T PRK07023 144 Y------------A-------GWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA 188 (243)
T ss_pred C------------C-------CchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence 4 2 6788999999999999999999 7779999999999999 7754
No 205
>PRK08264 short chain dehydrogenase; Validated
Probab=99.92 E-value=1.4e-23 Score=177.86 Aligned_cols=177 Identities=18% Similarity=0.201 Sum_probs=146.8
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc-EEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-LFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++++++++ ||||+ +|||+++|+. |+++|+ .|+ .|+.+++++ . +.++.++++|++|.++
T Consensus 3 ~~~~~~vl-ItGgs------g~iG~~la~~---l~~~G~~~V~~~~r~~~~~~~-------~--~~~~~~~~~D~~~~~~ 63 (238)
T PRK08264 3 DIKGKVVL-VTGAN------RGIGRAFVEQ---LLARGAAKVYAAARDPESVTD-------L--GPRVVPLQLDVTDPAS 63 (238)
T ss_pred CCCCCEEE-EECCC------chHHHHHHHH---HHHCCcccEEEEecChhhhhh-------c--CCceEEEEecCCCHHH
Confidence 46788999 99999 9999999555 556665 554 477665443 1 4578999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEccccc---CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVF---GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+.++++. ++++|+|||+||.. .+..+.+.++++.++++|+.+++.+++++.|.+++.+. ++||++||..+.
T Consensus 64 ~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~v~~sS~~~~ 137 (238)
T PRK08264 64 VAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGG--GAIVNVLSVLSW 137 (238)
T ss_pred HHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CEEEEEcChhhc
Confidence 9887765 36799999999983 23556788999999999999999999999999987766 899999998776
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
.+. + +...|+.+|++++.+++.++.++.+.|+++++++||.++ ++...
T Consensus 138 ~~~------------~-------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~ 186 (238)
T PRK08264 138 VNF------------P-------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG 186 (238)
T ss_pred cCC------------C-------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc
Confidence 543 2 567899999999999999999998889999999999999 77543
No 206
>KOG1204|consensus
Probab=99.91 E-value=9.1e-25 Score=175.73 Aligned_cols=191 Identities=17% Similarity=0.099 Sum_probs=147.6
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.+++.++++|+||++ +|||...+..+.++ .....+++++...++ .+.+.... +........|++...-..
T Consensus 1 m~~~~r~villTGaS------rgiG~~~v~~i~ae-d~e~~r~g~~r~~a~--~~~L~v~~-gd~~v~~~g~~~e~~~l~ 70 (253)
T KOG1204|consen 1 MDLNMRKVILLTGAS------RGIGTGSVATILAE-DDEALRYGVARLLAE--LEGLKVAY-GDDFVHVVGDITEEQLLG 70 (253)
T ss_pred CCcccceEEEEecCC------CCccHHHHHHHHhc-chHHHHHhhhccccc--ccceEEEe-cCCcceechHHHHHHHHH
Confidence 367788888899999 99998774444433 222222222222211 22222222 244555667888777788
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCC-----CCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLG-----FSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESH 174 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~ 174 (292)
.+.+..+++.++.|++|||||..++. ...+.++|.+.+++|+++.+.|.+.++|.+++++ . +.||+|||.++
T Consensus 71 al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~--~~vVnvSS~aa 148 (253)
T KOG1204|consen 71 ALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVN--GNVVNVSSLAA 148 (253)
T ss_pred HHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCcc--CeEEEecchhh
Confidence 88888989999999999999987532 2557889999999999999999999999999986 5 89999999988
Q ss_pred ccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccccc
Q psy4251 175 RYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKW 243 (292)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~ 243 (292)
..+. + .+.+||.+|+|.++|++.+|.|-+ .+|++.++.||.|+ .|....
T Consensus 149 v~p~------------~-------~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~i 198 (253)
T KOG1204|consen 149 VRPF------------S-------SWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCI 198 (253)
T ss_pred hccc------------c-------HHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHH
Confidence 8765 3 899999999999999999999987 78999999999999 887653
No 207
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.1e-23 Score=175.94 Aligned_cols=170 Identities=11% Similarity=0.026 Sum_probs=140.5
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
|||||+ +|||+++ +.+|+++|+.|+ .|+.+++++..+++++ +.++.++.+|+++.+++.++++++
T Consensus 1 lItGas------~~iG~~~---a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~- 67 (230)
T PRK07041 1 LVVGGS------SGIGLAL---ARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAEA- 67 (230)
T ss_pred CeecCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHhc-
Confidence 499999 9999999 555667777765 4888777777766642 457889999999999999988763
Q ss_pred HhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCC
Q psy4251 108 KKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS 185 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~ 185 (292)
+++|+||||||... +..+.+.+++++++++|+.+++.+++ .+.+. +. ++||++||..+..+.
T Consensus 68 ---~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~--g~iv~~ss~~~~~~~------- 131 (230)
T PRK07041 68 ---GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PG--GSLTFVSGFAAVRPS------- 131 (230)
T ss_pred ---CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CC--eEEEEECchhhcCCC-------
Confidence 78999999999863 35567888999999999999999999 44443 34 899999999876554
Q ss_pred ccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 186 KSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 186 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+.+|+++++++++++.++.. |++++++||+++ ++...
T Consensus 132 -----~-------~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~ 175 (230)
T PRK07041 132 -----A-------SGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSK 175 (230)
T ss_pred -----C-------cchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHh
Confidence 2 6778999999999999999999975 999999999999 87654
No 208
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.91 E-value=1.1e-22 Score=164.05 Aligned_cols=226 Identities=11% Similarity=0.042 Sum_probs=177.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-HHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-WDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
..|+||+++ |+|-. +.+.|++.+ +..+.++|+.++... .+++++-.+++.+.. +...+++||+++.+++
T Consensus 2 g~L~GK~~l-I~Gva----n~rSIAwGI---Ak~l~~~GAeL~fTy~~e~l~krv~~la~~~--~s~~v~~cDV~~d~~i 71 (259)
T COG0623 2 GLLEGKRIL-IMGVA----NNRSIAWGI---AKALAEQGAELAFTYQGERLEKRVEELAEEL--GSDLVLPCDVTNDESI 71 (259)
T ss_pred CccCCceEE-EEEec----ccccHHHHH---HHHHHHcCCEEEEEeccHHHHHHHHHHHhhc--cCCeEEecCCCCHHHH
Confidence 468999999 99975 669999999 666778898887532 236666666666553 2467799999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC------CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG------LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
+++++++.++++++|.|||+-|+.. ...+.+.++|...+++..++...+.+++.|.|.. + |.||.++-..
T Consensus 72 ~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--g--gSiltLtYlg 147 (259)
T COG0623 72 DALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--G--GSILTLTYLG 147 (259)
T ss_pred HHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--C--CcEEEEEecc
Confidence 9999999999999999999999863 4567889999999999999999999999999985 3 8999988877
Q ss_pred cccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccccccccccccCCccchh
Q psy4251 174 HRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKITVSKKWWRFGTPVRTF 253 (292)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~ 253 (292)
+.... | .++..+.+|++++.-+|.||.++.++|||||.|.-|+++.+..... +-...++
T Consensus 148 s~r~v------------P-------nYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI--~~f~~~l 206 (259)
T COG0623 148 SERVV------------P-------NYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI--GDFRKML 206 (259)
T ss_pred ceeec------------C-------CCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc--ccHHHHH
Confidence 65544 2 5668899999999999999999999999999999999993322211 1123444
Q ss_pred hhhhccccc--cCCHHHhhc------ccccCCCCCc
Q psy4251 254 SWISRVRPV--TNFQVDLTG------TAEKVGLSGL 281 (292)
Q Consensus 254 ~~~~~~~~~--~~~~~~~a~------~~~~~~~~G~ 281 (292)
.+.....|+ ..++|+... ++...+.+|+
T Consensus 207 ~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiTGe 242 (259)
T COG0623 207 KENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGE 242 (259)
T ss_pred HHHHhhCCccCCCCHHHhhhhHHHHhcchhcccccc
Confidence 444333333 456777665 6777788887
No 209
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.7e-22 Score=169.67 Aligned_cols=176 Identities=15% Similarity=0.049 Sum_probs=137.4
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
++++ |||++ +|||..+ +.+|++.|+.|+ .|+.+..++ +... .+.++++|+++.+++++++
T Consensus 2 ~~vl-vtG~s------g~iG~~l---a~~L~~~G~~v~~~~r~~~~~~~----~~~~----~~~~~~~D~~~~~~v~~~~ 63 (222)
T PRK06953 2 KTVL-IVGAS------RGIGREF---VRQYRADGWRVIATARDAAALAA----LQAL----GAEALALDVADPASVAGLA 63 (222)
T ss_pred ceEE-EEcCC------CchhHHH---HHHHHhCCCEEEEEECCHHHHHH----HHhc----cceEEEecCCCHHHHHHHH
Confidence 4677 99999 9999999 444556677665 477665543 3222 3457899999999999988
Q ss_pred HHHHHhCCCccEEEEcccccC----CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG----LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
+++.. .++|++|||+|... +..+.+.++++..+++|+.+++.++++++|.|.+. . +++|+++|..+..+..
T Consensus 64 ~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~--g~iv~isS~~~~~~~~ 138 (222)
T PRK06953 64 WKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-G--GVLAVLSSRMGSIGDA 138 (222)
T ss_pred HHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-C--CeEEEEcCcccccccc
Confidence 77642 47999999999863 23455788999999999999999999999998654 4 8999999986654421
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ ......|+.+|.+++.+++.++.++. ++++|+|+||+++ ++.++
T Consensus 139 -----------~-----~~~~~~Y~~sK~a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~ 184 (222)
T PRK06953 139 -----------T-----GTTGWLYRASKAALNDALRAASLQAR--HATCIALHPGWVRTDMGGA 184 (222)
T ss_pred -----------c-----CCCccccHHhHHHHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCC
Confidence 0 00123699999999999999999875 6999999999999 88665
No 210
>PRK08017 oxidoreductase; Provisional
Probab=99.90 E-value=2.2e-22 Score=172.33 Aligned_cols=178 Identities=20% Similarity=0.104 Sum_probs=146.8
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|+++ ||||+ +|||.++ +..|.++|+.|+ .|+.++.+.. .+. .+..+++|+++.+++.+++
T Consensus 3 k~vl-VtGas------g~IG~~l---a~~l~~~g~~v~~~~r~~~~~~~~----~~~----~~~~~~~D~~~~~~~~~~~ 64 (256)
T PRK08017 3 KSVL-ITGCS------SGIGLEA---ALELKRRGYRVLAACRKPDDVARM----NSL----GFTGILLDLDDPESVERAA 64 (256)
T ss_pred CEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCHHHhHHH----HhC----CCeEEEeecCCHHHHHHHH
Confidence 5777 99999 9999999 555556676665 4777665443 221 3678899999999999999
Q ss_pred HHHHHhC-CCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 104 EEYQKKF-RSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 104 ~~~~~~~-~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
+.+.+.. +++|++|||||... +..+.+.+++++.+++|+.|++.+++.++|.+.+.+. ++||++||..+..+.
T Consensus 65 ~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--~~iv~~ss~~~~~~~-- 140 (256)
T PRK08017 65 DEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGE--GRIVMTSSVMGLIST-- 140 (256)
T ss_pred HHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--CEEEEEcCcccccCC--
Confidence 9887643 68999999999753 4456688889999999999999999999999987766 899999998666543
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ ....|+.+|++++.++++++.++...|++++++.||.+. ++.+.
T Consensus 141 ----------~-------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 186 (256)
T PRK08017 141 ----------P-------GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN 186 (256)
T ss_pred ----------C-------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc
Confidence 2 567899999999999999999998889999999999998 77654
No 211
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.87 E-value=2.1e-21 Score=165.13 Aligned_cols=205 Identities=14% Similarity=-0.035 Sum_probs=137.1
Q ss_pred HHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCC
Q psy4251 52 CFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSH 129 (292)
Q Consensus 52 ~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~ 129 (292)
+.+|+++|+.|+. |+.++.+ ...++++|++|.++++++++++. +++|+||||||...
T Consensus 2 a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----- 60 (241)
T PRK12428 2 ARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----- 60 (241)
T ss_pred hHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC-----
Confidence 4556678877764 6654421 12357899999999999998874 68999999999752
Q ss_pred CCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCC-------CCCccc-cCcCCCCCChhhh
Q psy4251 130 TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD-------TISKSV-LSVENYSDFWAMT 201 (292)
Q Consensus 130 ~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~ 201 (292)
.++++.++++|+.+++.+++.++|.|.+ . ++||++||.++........ ..+.++ ..........+..
T Consensus 61 -~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~--g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
T PRK12428 61 -TAPVELVARVNFLGLRHLTEALLPRMAP--G--GAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT 135 (241)
T ss_pred -CCCHHHhhhhchHHHHHHHHHHHHhccC--C--cEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence 2468999999999999999999999863 3 8999999998764210000 000000 0000001223567
Q ss_pred HHHHhHHHHHHHHHHHH-hHhcCCCeEEEEecCCccc-cccccccccCCccchhhhhhccccccCCHHHhhc------cc
Q psy4251 202 AYNDTKLCNVLFGEKLA-TLWYKYKIALSSRHCCWKI-TVSKKWWRFGTPVRTFSWISRVRPVTNFQVDLTG------TA 273 (292)
Q Consensus 202 ~Y~~sK~a~~~~~~~la-~~~~~~gi~v~~v~PG~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~------~~ 273 (292)
.|++||+++.+++++++ .++.++||+||+|+||.|. +|.+..... ...............+.+|++.|. ++
T Consensus 136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~ 214 (241)
T PRK12428 136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM-LGQERVDSDAKRMGRPATADEQAAVLVFLCSD 214 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhh-hhhHhhhhcccccCCCCCHHHHHHHHHHHcCh
Confidence 89999999999999999 9999889999999999999 887643210 000111000001112468888887 33
Q ss_pred ccCCCCCccc
Q psy4251 274 EKVGLSGLPD 283 (292)
Q Consensus 274 ~~~~~~G~~~ 283 (292)
.....+|+..
T Consensus 215 ~~~~~~G~~i 224 (241)
T PRK12428 215 AARWINGVNL 224 (241)
T ss_pred hhcCccCcEE
Confidence 4445677743
No 212
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.87 E-value=4.8e-21 Score=202.19 Aligned_cols=178 Identities=15% Similarity=0.060 Sum_probs=144.4
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhc-CcEE--EEcCH---------------------------------
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQS-SKLF--YQNCW--------------------------------- 67 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~-g~~v--~~r~~--------------------------------- 67 (292)
+|++++ ||||+ +|||+++|+. |+++ |+.| ++|+.
T Consensus 1996 ~g~vvL-VTGGa------rGIG~aiA~~---LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~ 2065 (2582)
T TIGR02813 1996 SDDVFL-VTGGA------KGVTFECALE---LAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPT 2065 (2582)
T ss_pred CCCEEE-EeCCC------CHHHHHHHHH---HHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccc
Confidence 478888 99999 9999999554 5554 3454 45761
Q ss_pred --------------HHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccccC--CCCCCCC
Q psy4251 68 --------------DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTE 131 (292)
Q Consensus 68 --------------~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~ 131 (292)
.+.++..+++.+. +.++.++.||++|.++++++++++.++ ++||+||||||+.. ...+.+.
T Consensus 2066 P~~i~~~~~~~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~ 2142 (2582)
T TIGR02813 2066 PKKVDALVRPVLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTL 2142 (2582)
T ss_pred cchhhhcccccchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCH
Confidence 1112223334333 568899999999999999999999887 68999999999863 4567899
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHH
Q psy4251 132 DGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNV 211 (292)
Q Consensus 132 ~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~ 211 (292)
++|++.|++|+.|.+.+++++.+.+. ++||++||..+..+. + +...|+++|.++.
T Consensus 2143 e~f~~v~~~nv~G~~~Ll~al~~~~~------~~IV~~SSvag~~G~------------~-------gqs~YaaAkaaL~ 2197 (2582)
T TIGR02813 2143 EEFNAVYGTKVDGLLSLLAALNAENI------KLLALFSSAAGFYGN------------T-------GQSDYAMSNDILN 2197 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC------CeEEEEechhhcCCC------------C-------CcHHHHHHHHHHH
Confidence 99999999999999999988876543 789999999988775 3 7789999999999
Q ss_pred HHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 212 LFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 212 ~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
.+++.++.+++. ++|++|+||.++ +|..
T Consensus 2198 ~la~~la~~~~~--irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2198 KAALQLKALNPS--AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred HHHHHHHHHcCC--cEEEEEECCeecCCccc
Confidence 999999999864 999999999999 8764
No 213
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.9e-20 Score=157.35 Aligned_cols=176 Identities=19% Similarity=0.160 Sum_probs=139.0
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
.|+++ ||||+ ++||+.+++.+.+. ..+.++.|+.++.++..+++ ..+.++++|++|.+++.++++
T Consensus 3 ~~~vl-VtG~~------g~iG~~l~~~l~~~--~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~ 67 (227)
T PRK08219 3 RPTAL-ITGAS------RGIGAAIARELAPT--HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVE 67 (227)
T ss_pred CCEEE-EecCC------cHHHHHHHHHHHhh--CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHH
Confidence 46777 99999 99999996665433 23333458776655443322 247789999999999888876
Q ss_pred HHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD 182 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~ 182 (292)
++ +++|+|||++|... +..+.+.+++...+++|+.+.+.+++.+++.+.++. +++|++||..+..+.
T Consensus 68 ~~----~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~v~~ss~~~~~~~---- 136 (227)
T PRK08219 68 QL----GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH---GHVVFINSGAGLRAN---- 136 (227)
T ss_pred hc----CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CeEEEEcchHhcCcC----
Confidence 54 57999999999864 345567788999999999999999999999988764 799999998766543
Q ss_pred CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
+ +...|+.+|.+++.+++.++.++... |+++++.||.+. ++...
T Consensus 137 --------~-------~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~ 181 (227)
T PRK08219 137 --------P-------GWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRG 181 (227)
T ss_pred --------C-------CCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhh
Confidence 2 56789999999999999999988765 999999999988 65543
No 214
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.84 E-value=7.3e-20 Score=147.28 Aligned_cols=171 Identities=13% Similarity=0.062 Sum_probs=132.6
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc-EEE--EcCHHHHHHH---HHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-LFY--QNCWDKANDA---ISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-~v~--~r~~~~~~~~---~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
++++ ||||+ +|||.++++ ++.+.|. .|+ .|+.+..+.. .+++.+. +.++.++++|+++.+++
T Consensus 1 ~~~l-i~Ga~------~~iG~~~~~---~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 68 (180)
T smart00822 1 GTYL-ITGGL------GGLGLELAR---WLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAAL 68 (180)
T ss_pred CEEE-EEcCC------ChHHHHHHH---HHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHH
Confidence 4567 99999 999999954 4555654 333 4654332222 3444433 56888999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.++++++...++++|++|||||... +..+.+.++++..+++|+.+++.+++.+.+ ... ++||++||..+..+
T Consensus 69 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--~~ii~~ss~~~~~~ 142 (180)
T smart00822 69 AAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPL--DFFVLFSSVAGVLG 142 (180)
T ss_pred HHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCc--ceEEEEccHHHhcC
Confidence 9999999988899999999999763 346678889999999999999999998843 234 89999999877765
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
. + ....|+.+|.++..+++.++. .|+++..++||++.
T Consensus 143 ~------------~-------~~~~y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~ 179 (180)
T smart00822 143 N------------P-------GQANYAAANAFLDALAAHRRA----RGLPATSINWGAWA 179 (180)
T ss_pred C------------C-------CchhhHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence 4 2 567899999999999877654 47889999999864
No 215
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.84 E-value=1.7e-19 Score=162.80 Aligned_cols=172 Identities=14% Similarity=0.055 Sum_probs=125.1
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
..++||+++ ||||+ +|||+++ +.++++.|+.|+. |+.+++++. +... ...+..+.+|++|.++
T Consensus 174 ~sl~gK~VL-ITGAS------gGIG~aL---A~~La~~G~~Vi~l~r~~~~l~~~---~~~~--~~~v~~v~~Dvsd~~~ 238 (406)
T PRK07424 174 LSLKGKTVA-VTGAS------GTLGQAL---LKELHQQGAKVVALTSNSDKITLE---INGE--DLPVKTLHWQVGQEAA 238 (406)
T ss_pred cCCCCCEEE-EeCCC------CHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHH---Hhhc--CCCeEEEEeeCCCHHH
Confidence 457899999 99999 9999999 6666778877763 666554332 2222 2356788999999988
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCC--CcEEEEEcCccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKL--FARVVVVSSESHRY 176 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~--~~~iV~vsS~~~~~ 176 (292)
+.+. ++++|++|||||+.. ..+.+.+++++++++|+.|++.++++++|.|++++.. .+.+|++|+ +. .
T Consensus 239 v~~~-------l~~IDiLInnAGi~~-~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~ 308 (406)
T PRK07424 239 LAEL-------LEKVDILIINHGINV-HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-V 308 (406)
T ss_pred HHHH-------hCCCCEEEECCCcCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-c
Confidence 7554 357999999999853 2356778899999999999999999999999765420 134555554 22 2
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
.. + ....|++||+|+..++. +.++. .++.|..+.||.++ ++
T Consensus 309 ~~------------~-------~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~ 350 (406)
T PRK07424 309 NP------------A-------FSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNL 350 (406)
T ss_pred cC------------C-------CchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCC
Confidence 21 1 34679999999999974 44443 35777788899888 65
No 216
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.79 E-value=4.4e-18 Score=150.91 Aligned_cols=164 Identities=14% Similarity=0.024 Sum_probs=123.2
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC--cEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS--KLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g--~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++||+++ ||||+ ++||..+++. |.+.| ..|+ .|+..+.....+++ +..++.++++|++|.++
T Consensus 2 ~~~k~vL-VTGat------G~IG~~l~~~---L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~ 67 (324)
T TIGR03589 2 FNNKSIL-ITGGT------GSFGKAFISR---LLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKER 67 (324)
T ss_pred cCCCEEE-EeCCC------CHHHHHHHHH---HHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHH
Confidence 4688988 99999 9999999554 54543 4444 46655443333222 23478899999999998
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
+.++++ .+|+|||+||...... ...+.+..+++|+.++.++++++.+. +. ++||++||.....
T Consensus 68 l~~~~~-------~iD~Vih~Ag~~~~~~--~~~~~~~~~~~Nv~g~~~ll~aa~~~----~~--~~iV~~SS~~~~~-- 130 (324)
T TIGR03589 68 LTRALR-------GVDYVVHAAALKQVPA--AEYNPFECIRTNINGAQNVIDAAIDN----GV--KRVVALSTDKAAN-- 130 (324)
T ss_pred HHHHHh-------cCCEEEECcccCCCch--hhcCHHHHHHHHHHHHHHHHHHHHHc----CC--CEEEEEeCCCCCC--
Confidence 887654 4899999999753211 12233578999999999999998752 33 7999999964321
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
+...|+.||++.+.++++++.+....|++++++.||.|.
T Consensus 131 --------------------p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~ 169 (324)
T TIGR03589 131 --------------------PINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVV 169 (324)
T ss_pred --------------------CCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeeccee
Confidence 345799999999999999988877789999999999998
No 217
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.79 E-value=3.9e-18 Score=154.62 Aligned_cols=219 Identities=11% Similarity=-0.023 Sum_probs=179.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
..++||+++ ||||+ +-||.++++++++.......++.|++.+..+...++++.+|..++.++-+|+.|.+.+.
T Consensus 246 ~~~~gK~vL-VTGag------GSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~ 318 (588)
T COG1086 246 AMLTGKTVL-VTGGG------GSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVE 318 (588)
T ss_pred hHcCCCEEE-EeCCC------CcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHH
Confidence 458999999 99999 99999998888888666677778999999999999999988889999999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
++++.. ++|+|+|.|+..+-+. -+....+.+.+|++|+.++++++...- - .++|.+|+.-+..
T Consensus 319 ~~~~~~-----kvd~VfHAAA~KHVPl--~E~nP~Eai~tNV~GT~nv~~aa~~~~----V--~~~V~iSTDKAV~---- 381 (588)
T COG1086 319 RAMEGH-----KVDIVFHAAALKHVPL--VEYNPEEAIKTNVLGTENVAEAAIKNG----V--KKFVLISTDKAVN---- 381 (588)
T ss_pred HHHhcC-----CCceEEEhhhhccCcc--hhcCHHHHHHHhhHhHHHHHHHHHHhC----C--CEEEEEecCcccC----
Confidence 987775 6999999999875222 234557899999999999999987543 2 7999999987664
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-------cccccccccCCccchh
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-------TVSKKWWRFGTPVRTF 253 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-------~~~~~~~~~~~~~~~~ 253 (292)
+.+.||+||.+.+.++.+++.+....+.++.+|.=|.|. ++++++-..+.|....
T Consensus 382 ------------------PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvT 443 (588)
T COG1086 382 ------------------PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVT 443 (588)
T ss_pred ------------------CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCcccc
Confidence 567999999999999999998776557899999999887 4445554556666777
Q ss_pred hhhhccccccCCHHHhhc---ccccCCCCCccc
Q psy4251 254 SWISRVRPVTNFQVDLTG---TAEKVGLSGLPD 283 (292)
Q Consensus 254 ~~~~~~~~~~~~~~~~a~---~~~~~~~~G~~~ 283 (292)
.+- +..++++.+|+++ .....+.+|..|
T Consensus 444 dp~--mtRyfMTI~EAv~LVlqA~a~~~gGeif 474 (588)
T COG1086 444 DPD--MTRFFMTIPEAVQLVLQAGAIAKGGEIF 474 (588)
T ss_pred CCC--ceeEEEEHHHHHHHHHHHHhhcCCCcEE
Confidence 777 8889999999998 344445666655
No 218
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.77 E-value=5.3e-18 Score=137.82 Aligned_cols=171 Identities=16% Similarity=0.138 Sum_probs=128.4
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC---HHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC---WDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
+++ |||++ +|||..+++++.+.....+.++.|+ ....++..+++++. +.++.+++||++|++++++++
T Consensus 2 tyl-itGG~------gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~ 72 (181)
T PF08659_consen 2 TYL-ITGGL------GGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAAL 72 (181)
T ss_dssp EEE-EETTT------SHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHH
T ss_pred EEE-EECCc------cHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHH
Confidence 466 99999 9999999888777765556666777 23455678888876 779999999999999999999
Q ss_pred HHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
+++.+++++||.|||+||... +..+.+.+.++.+++..+.|..+|.+.+.+ .+. ..+|.+||.++..+.
T Consensus 73 ~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l--~~~i~~SSis~~~G~--- 143 (181)
T PF08659_consen 73 AQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPL--DFFILFSSISSLLGG--- 143 (181)
T ss_dssp HTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTT--SEEEEEEEHHHHTT----
T ss_pred HHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCC--CeEEEECChhHhccC---
Confidence 999999999999999999873 567789999999999999999999887755 233 799999999998877
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCW 235 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~ 235 (292)
+ +...|+++...++.|++.... .|..+.+|+-|.
T Consensus 144 ---------~-------gq~~YaaAN~~lda~a~~~~~----~g~~~~sI~wg~ 177 (181)
T PF08659_consen 144 ---------P-------GQSAYAAANAFLDALARQRRS----RGLPAVSINWGA 177 (181)
T ss_dssp ---------T-------TBHHHHHHHHHHHHHHHHHHH----TTSEEEEEEE-E
T ss_pred ---------c-------chHhHHHHHHHHHHHHHHHHh----CCCCEEEEEccc
Confidence 3 789999999988888876543 356677777654
No 219
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.75 E-value=4.6e-17 Score=143.60 Aligned_cols=185 Identities=9% Similarity=-0.101 Sum_probs=129.6
Q ss_pred CCceEEEEcCCCCCCCCcccchhh--HHHHHHHHhhcCcEEEE--cCHHH------------HHHHHHHHHhhCCCCceE
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKK--DGNLCFDLVQSSKLFYQ--NCWDK------------ANDAISKILTEKPSAQCI 87 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~--~a~~~~~l~~~g~~v~~--r~~~~------------~~~~~~~l~~~~~~~~~~ 87 (292)
.||+++ |||++ +|||++ + +..+ +.|+.+++ +..++ .+.+.+.+.+. +..+.
T Consensus 40 ggK~aL-VTGaS------sGIGlA~~I---A~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~ 106 (398)
T PRK13656 40 GPKKVL-VIGAS------SGYGLASRI---AAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAK 106 (398)
T ss_pred CCCEEE-EECCC------chHhHHHHH---HHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceE
Confidence 468888 99999 999999 7 5667 78886443 22211 12233334332 45678
Q ss_pred EEEccCCChHHHHHHHHHHHHhCCCccEEEEcccccCCCC------------------------------------CCCC
Q psy4251 88 AMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGF------------------------------------SHTE 131 (292)
Q Consensus 88 ~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~------------------------------------~~~~ 131 (292)
.++||+++.++++++++++.+++|+||+||||+|...+.. ..+.
T Consensus 107 ~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~ 186 (398)
T PRK13656 107 SINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATE 186 (398)
T ss_pred EEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCH
Confidence 8999999999999999999999999999999999762211 0122
Q ss_pred cchhhhhhhhhhHH---HHH--HHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhh--hHHH
Q psy4251 132 DGFETTFQVNHLAH---FYL--TLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAM--TAYN 204 (292)
Q Consensus 132 ~~~~~~~~vN~~~~---~~l--~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~ 204 (292)
++++.|+ +++|. ..- .+...+.|. .+ +++|-.|........+ .+ ..-+
T Consensus 187 ~ei~~Tv--~vMggedw~~Wi~al~~a~lla--~g--~~~va~TY~G~~~t~p-------------------~Y~~g~mG 241 (398)
T PRK13656 187 EEIADTV--KVMGGEDWELWIDALDEAGVLA--EG--AKTVAYSYIGPELTHP-------------------IYWDGTIG 241 (398)
T ss_pred HHHHHHH--HhhccchHHHHHHHHHhccccc--CC--cEEEEEecCCcceeec-------------------ccCCchHH
Confidence 2333333 33443 222 334445554 33 8999999876655431 22 3679
Q ss_pred HhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccccccc
Q psy4251 205 DTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKKWWRF 246 (292)
Q Consensus 205 ~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~~~~~ 246 (292)
.+|++++.-++.|+.+|++.||++|++.+|.+. .-....+.+
T Consensus 242 ~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~Ass~Ip~~ 284 (398)
T PRK13656 242 KAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQASSAIPVM 284 (398)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhcCCCc
Confidence 999999999999999999999999999999999 555555443
No 220
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.75 E-value=4e-17 Score=146.28 Aligned_cols=183 Identities=14% Similarity=0.050 Sum_probs=130.8
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
++||+++ ||||+ ++||.++ +..|.+.|+.|++ |+..........+. . ..++.++.+|+++.+++.
T Consensus 2 ~~~k~il-ItGat------G~IG~~l---~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~Dl~~~~~~~ 68 (349)
T TIGR02622 2 WQGKKVL-VTGHT------GFKGSWL---SLWLLELGAEVYGYSLDPPTSPNLFELLN-L--AKKIEDHFGDIRDAAKLR 68 (349)
T ss_pred cCCCEEE-EECCC------ChhHHHH---HHHHHHCCCEEEEEeCCCccchhHHHHHh-h--cCCceEEEccCCCHHHHH
Confidence 4678888 99999 9999999 6666677877764 55443333322222 1 236778999999999998
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
+++++. ++|+|||+||... ...+.++....+++|+.++..+++++... ... ++||++||...+.....
T Consensus 69 ~~~~~~-----~~d~vih~A~~~~--~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~--~~iv~~SS~~vyg~~~~ 136 (349)
T TIGR02622 69 KAIAEF-----KPEIVFHLAAQPL--VRKSYADPLETFETNVMGTVNLLEAIRAI---GSV--KAVVNVTSDKCYRNDEW 136 (349)
T ss_pred HHHhhc-----CCCEEEECCcccc--cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCC--CEEEEEechhhhCCCCC
Confidence 888764 5899999999642 23355667889999999999999987431 223 69999999765532110
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC----CCeEEEEecCCccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK----YKIALSSRHCCWKI 237 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~----~gi~v~~v~PG~v~ 237 (292)
...+.. .....+...|+.||.+.+.+++.+++++.. .|++++++.||.+-
T Consensus 137 ~~~~~e-------~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vy 190 (349)
T TIGR02622 137 VWGYRE-------TDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVI 190 (349)
T ss_pred CCCCcc-------CCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCccc
Confidence 000111 111225668999999999999999988744 38999999999988
No 221
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.73 E-value=1.7e-16 Score=140.83 Aligned_cols=189 Identities=11% Similarity=-0.050 Sum_probs=130.0
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
+||+++ ||||+ ++||..+ +.+|.+.|+.|+ .|+.+..++....+.......++.++++|+++.+++.+
T Consensus 4 ~~k~vl-VtG~~------G~IG~~l---~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 73 (325)
T PLN02989 4 GGKVVC-VTGAS------GYIASWI---VKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFEL 73 (325)
T ss_pred CCCEEE-EECCc------hHHHHHH---HHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHH
Confidence 478888 99999 9999999 666777888875 36655444332222111112478899999999998887
Q ss_pred HHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC-
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT- 180 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~- 180 (292)
+++ .+|+||||||.... ..+.+.+...+++|+.+++++++++.+.+ .. ++||++||.++..+...
T Consensus 74 ~~~-------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~--~~iv~~SS~~~~~~~~~~ 139 (325)
T PLN02989 74 AID-------GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVS---SV--KRVILTSSMAAVLAPETK 139 (325)
T ss_pred HHc-------CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcC---Cc--eEEEEecchhheecCCcc
Confidence 764 48999999996532 33455678899999999999999987653 23 79999999876544211
Q ss_pred ---CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 181 ---KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 181 ---~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
...++.+.+.. ..........|+.||.+.+.+++.++++. |+.++.+.|+.+- +..
T Consensus 140 ~~~~~~~~E~~~~~-p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~ 199 (325)
T PLN02989 140 LGPNDVVDETFFTN-PSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPIL 199 (325)
T ss_pred CCCCCccCcCCCCc-hhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCC
Confidence 00011111110 00000013569999999999999887764 6899999999998 543
No 222
>PRK06720 hypothetical protein; Provisional
Probab=99.73 E-value=3e-16 Score=125.68 Aligned_cols=141 Identities=13% Similarity=0.197 Sum_probs=109.6
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++||+++ ||||+ +|||.++ +..+.+.|..|+ .|+.+.+++..+++... +.+..++++|+++.++
T Consensus 12 ~~l~gk~~l-VTGa~------~GIG~ai---a~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~ 79 (169)
T PRK06720 12 MKLAGKVAI-VTGGG------IGIGRNT---ALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGD 79 (169)
T ss_pred cccCCCEEE-EecCC------ChHHHHH---HHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHH
Confidence 457899999 99999 9999999 555667777775 47777777777777643 4567789999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccC--CC-CCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCC-----CCcEEEEEc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFG--LG-FSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAK-----LFARVVVVS 170 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~--~~-~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~-----~~~~iV~vs 170 (292)
++++++++.++++++|++|||||+.. +. .+.+.++ ++ .+|+.+.+..++.+.+.+.++.. +.||+..||
T Consensus 80 v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (169)
T PRK06720 80 WQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIG 156 (169)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEec
Confidence 99999999999999999999999864 22 2223333 33 77888889999999998876542 248999999
Q ss_pred Cccccc
Q psy4251 171 SESHRY 176 (292)
Q Consensus 171 S~~~~~ 176 (292)
+.++.+
T Consensus 157 ~~~~~~ 162 (169)
T PRK06720 157 TKGQSF 162 (169)
T ss_pred cccccc
Confidence 876544
No 223
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.72 E-value=2.7e-16 Score=145.68 Aligned_cols=172 Identities=11% Similarity=0.042 Sum_probs=126.0
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhC-------CCCceEEEEccC
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEK-------PSAQCIAMELDL 93 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~-------~~~~~~~~~~Dl 93 (292)
.+||+++ ||||+ +|||+.+ +.+|++.|+.|+ +|+.++++.+.+++.+.. ...++.++++|+
T Consensus 78 ~~gKvVL-VTGAT------GgIG~aL---Ar~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDL 147 (576)
T PLN03209 78 KDEDLAF-VAGAT------GKVGSRT---VRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDL 147 (576)
T ss_pred CCCCEEE-EECCC------CHHHHHH---HHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecC
Confidence 4678888 99999 9999999 555667787765 599888887776664311 123688999999
Q ss_pred CChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 94 CRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 94 s~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
++.+++.+. ++.+|+||||+|.... ...++...+++|+.+..++++++... +. +|||++||.+
T Consensus 148 tD~esI~~a-------LggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a----gV--gRIV~VSSig 210 (576)
T PLN03209 148 EKPDQIGPA-------LGNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA----KV--NHFILVTSLG 210 (576)
T ss_pred CCHHHHHHH-------hcCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh----CC--CEEEEEccch
Confidence 998887553 4679999999997531 22246788999999999999887643 34 8999999986
Q ss_pred cccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 174 HRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
+..... ....|. +|.++..+.+.+..++...||+++.|+||++. ++.+
T Consensus 211 a~~~g~-------------------p~~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~ 259 (576)
T PLN03209 211 TNKVGF-------------------PAAILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDA 259 (576)
T ss_pred hcccCc-------------------cccchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccc
Confidence 531110 111233 66777777777777887789999999999998 6543
No 224
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.71 E-value=1.3e-17 Score=142.40 Aligned_cols=211 Identities=13% Similarity=0.046 Sum_probs=143.2
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceE----EEEccCCChHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCI----AMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~----~~~~Dls~~~~v~~~~~~ 105 (292)
|||||+ +-||.+++++++++.....+++.+++.++.++..++++..++.++. .+.+|+.|.+.+..++++
T Consensus 2 LVTGa~------GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~ 75 (293)
T PF02719_consen 2 LVTGAG------GSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE 75 (293)
T ss_dssp EEETTT------SHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-
T ss_pred EEEccc------cHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh
Confidence 499999 9999999777776655556677899999999999998776554443 457899999998888765
Q ss_pred HHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCC
Q psy4251 106 YQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS 185 (292)
Q Consensus 106 ~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~ 185 (292)
. ++|+|+|.|+.-+.+. -++...+.+++|++|+.++++++..+ +. .++|++|+.-+..
T Consensus 76 ~-----~pdiVfHaAA~KhVpl--~E~~p~eav~tNv~GT~nv~~aa~~~----~v--~~~v~ISTDKAv~--------- 133 (293)
T PF02719_consen 76 Y-----KPDIVFHAAALKHVPL--MEDNPFEAVKTNVLGTQNVAEAAIEH----GV--ERFVFISTDKAVN--------- 133 (293)
T ss_dssp ------T-SEEEE------HHH--HCCCHHHHHHHHCHHHHHHHHHHHHT----T---SEEEEEEECGCSS---------
T ss_pred c-----CCCEEEEChhcCCCCh--HHhCHHHHHHHHHHHHHHHHHHHHHc----CC--CEEEEccccccCC---------
Confidence 4 6999999999865221 22456788999999999999998754 33 7999999986653
Q ss_pred ccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-------cccccccccCCccchhhhhhc
Q psy4251 186 KSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-------TVSKKWWRFGTPVRTFSWISR 258 (292)
Q Consensus 186 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-------~~~~~~~~~~~~~~~~~~~~~ 258 (292)
+.+.||+||...+.++.+.+......+.++.+|.=|.|. +++.+....+.|.....+-
T Consensus 134 -------------PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~-- 198 (293)
T PF02719_consen 134 -------------PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPD-- 198 (293)
T ss_dssp ---------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT--
T ss_pred -------------CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCC--
Confidence 567999999999999999999886677899999888887 2223333334455555555
Q ss_pred cccccCCHHHhhc---ccccCCCCCccc
Q psy4251 259 VRPVTNFQVDLTG---TAEKVGLSGLPD 283 (292)
Q Consensus 259 ~~~~~~~~~~~a~---~~~~~~~~G~~~ 283 (292)
+..+.++++|+++ .....+.+|..|
T Consensus 199 mtRffmti~EAv~Lvl~a~~~~~~geif 226 (293)
T PF02719_consen 199 MTRFFMTIEEAVQLVLQAAALAKGGEIF 226 (293)
T ss_dssp -EEEEE-HHHHHHHHHHHHHH--TTEEE
T ss_pred cEEEEecHHHHHHHHHHHHhhCCCCcEE
Confidence 7778889999988 222333455544
No 225
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.69 E-value=8.6e-16 Score=137.17 Aligned_cols=188 Identities=11% Similarity=-0.047 Sum_probs=126.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHH-HHHHHHHHh-h-CCCCceEEEEccCCC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKA-NDAISKILT-E-KPSAQCIAMELDLCR 95 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~-~~~~~~l~~-~-~~~~~~~~~~~Dls~ 95 (292)
.|++|++++ ||||+ ++||..+ +.+|...|+.|++ |+.+.. ....+.+.+ . ..+.++.++.+|++|
T Consensus 2 ~~~~~~~vl-VTGat------GfiG~~l---~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 71 (340)
T PLN02653 2 GDPPRKVAL-ITGIT------GQDGSYL---TEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSD 71 (340)
T ss_pred CCCCCCEEE-EECCC------CccHHHH---HHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCC
Confidence 577899988 99999 9999999 6667778887764 443211 111222211 0 113468899999999
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
.+++.++++.+ .+|+|||+||..... ...+..+..+++|+.++.++++++.+...+... ..++|++||.+.+
T Consensus 72 ~~~~~~~~~~~-----~~d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~-~~~~v~~Ss~~vy 143 (340)
T PLN02653 72 ASSLRRWLDDI-----KPDEVYNLAAQSHVA--VSFEMPDYTADVVATGALRLLEAVRLHGQETGR-QIKYYQAGSSEMY 143 (340)
T ss_pred HHHHHHHHHHc-----CCCEEEECCcccchh--hhhhChhHHHHHHHHHHHHHHHHHHHhcccccc-ceeEEEeccHHHh
Confidence 99999988775 489999999975422 123345677899999999999999887643210 0278888887544
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC---CCeEEEEecCCc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK---YKIALSSRHCCW 235 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~---~gi~v~~v~PG~ 235 (292)
.... . .++. .....+...|+.||.+.+.+++.+++++.- .++.++...||.
T Consensus 144 g~~~-~-~~~E-------~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~ 197 (340)
T PLN02653 144 GSTP-P-PQSE-------TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRR 197 (340)
T ss_pred CCCC-C-CCCC-------CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCC
Confidence 3221 0 1111 122335678999999999999999888642 234455556653
No 226
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.65 E-value=1.1e-14 Score=129.06 Aligned_cols=189 Identities=11% Similarity=-0.023 Sum_probs=125.4
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
..|++++ ||||+ +.||..+ +.+|.++|+.|+ +|+..+.+...+.........++.++++|+++.+++.
T Consensus 3 ~~~~~vl-VTGat------G~iG~~l---~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 72 (322)
T PLN02986 3 GGGKLVC-VTGAS------GYIASWI---VKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFE 72 (322)
T ss_pred CCCCEEE-EECCC------cHHHHHH---HHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHH
Confidence 4688888 99999 9999999 666777888775 4765544333222211111246889999999998887
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc-ccC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY-SYI 179 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~-~~~ 179 (292)
++++ .+|+|||+|+.... . ..+.....+++|+.++.++++++... ... .|||++||.++.. +..
T Consensus 73 ~~~~-------~~d~vih~A~~~~~--~-~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v--~rvV~~SS~~~~~~~~~ 137 (322)
T PLN02986 73 QAIE-------GCDAVFHTASPVFF--T-VKDPQTELIDPALKGTINVLNTCKET---PSV--KRVILTSSTAAVLFRQP 137 (322)
T ss_pred HHHh-------CCCEEEEeCCCcCC--C-CCCchhhhhHHHHHHHHHHHHHHHhc---CCc--cEEEEecchhheecCCc
Confidence 7765 38999999997421 1 12334567899999999999886532 123 6999999986542 211
Q ss_pred C---CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 180 T---KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 180 ~---~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
+ ...++.+.+.. ......+...|+.||.+.+.+++.+.++. |+.++++.|+.|- +..
T Consensus 138 ~~~~~~~~~E~~~~~-p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~ 198 (322)
T PLN02986 138 PIEANDVVDETFFSD-PSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLL 198 (322)
T ss_pred cCCCCCCcCcccCCC-hHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCC
Confidence 1 00011111111 00000123579999999999999887764 6999999999999 654
No 227
>PLN02214 cinnamoyl-CoA reductase
Probab=99.64 E-value=1.5e-14 Score=129.32 Aligned_cols=182 Identities=14% Similarity=-0.002 Sum_probs=126.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHH-HHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDA-ISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.+++++++ ||||+ +.||..+ +.+|.++|+.|.+ |+.+..... ..++... ..++.++++|+++.++
T Consensus 7 ~~~~~~vl-VTGat------GfIG~~l---~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~ 74 (342)
T PLN02214 7 SPAGKTVC-VTGAG------GYIASWI---VKILLERGYTVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEA 74 (342)
T ss_pred cCCCCEEE-EECCC------cHHHHHH---HHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHH
Confidence 35688888 99999 9999999 6667788887764 765443221 2223211 2368889999999988
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
+.++++ .+|+|||+|+.. .++.+..+++|+.++..+++++... .. .|||++||..+..+.
T Consensus 75 ~~~~~~-------~~d~Vih~A~~~-------~~~~~~~~~~nv~gt~~ll~aa~~~----~v--~r~V~~SS~~avyg~ 134 (342)
T PLN02214 75 LKAAID-------GCDGVFHTASPV-------TDDPEQMVEPAVNGAKFVINAAAEA----KV--KRVVITSSIGAVYMD 134 (342)
T ss_pred HHHHHh-------cCCEEEEecCCC-------CCCHHHHHHHHHHHHHHHHHHHHhc----CC--CEEEEeccceeeecc
Confidence 877754 489999999964 2346788999999999999987642 33 699999997655432
Q ss_pred CCC---CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 179 ITK---DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 179 ~~~---~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
... ..++.+.+++ ......+...|+.||.+.+.+++.++++. |+.+..+.|+.|- +-
T Consensus 135 ~~~~~~~~~~E~~~~~-~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~ 195 (342)
T PLN02214 135 PNRDPEAVVDESCWSD-LDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPP 195 (342)
T ss_pred CCCCCCcccCcccCCC-hhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCC
Confidence 110 0122221111 00011134679999999999999887765 6999999999998 53
No 228
>PLN02583 cinnamoyl-CoA reductase
Probab=99.62 E-value=3.2e-14 Score=124.75 Aligned_cols=182 Identities=10% Similarity=-0.093 Sum_probs=122.1
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCH--HHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCW--DKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.+|+++ ||||+ ++||..+ +.+|.++|+.|++ |+. .+..+...++... +.++.++++|++|.+++
T Consensus 5 ~~k~vl-VTGat------G~IG~~l---v~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~ 72 (297)
T PLN02583 5 SSKSVC-VMDAS------GYVGFWL---VKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSI 72 (297)
T ss_pred CCCEEE-EECCC------CHHHHHH---HHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHH
Confidence 467788 99999 9999999 6667788888864 642 2232333333211 34688899999999887
Q ss_pred HHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc-
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY- 178 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~- 178 (292)
.+++ ...|.++|.++... +. ...++..+++|+.|++++++++.+.+ .. +|||++||.++....
T Consensus 73 ~~~l-------~~~d~v~~~~~~~~---~~-~~~~~~~~~~nv~gt~~ll~aa~~~~---~v--~riV~~SS~~a~~~~~ 136 (297)
T PLN02583 73 LDAL-------KGCSGLFCCFDPPS---DY-PSYDEKMVDVEVRAAHNVLEACAQTD---TI--EKVVFTSSLTAVIWRD 136 (297)
T ss_pred HHHH-------cCCCEEEEeCccCC---cc-cccHHHHHHHHHHHHHHHHHHHHhcC---Cc--cEEEEecchHheeccc
Confidence 6543 24788888665331 11 12467899999999999999987653 23 799999998765321
Q ss_pred CC-CC--CCCccccCcCCCCCC--hhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 179 IT-KD--TISKSVLSVENYSDF--WAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 179 ~~-~~--~~~~~~~~~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
.. .. .++.+.++. ..+ .....|+.||...+.+++.++++. |+++++++||.|. +.
T Consensus 137 ~~~~~~~~~~E~~~~~---~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp~ 197 (297)
T PLN02583 137 DNISTQKDVDERSWSD---QNFCRKFKLWHALAKTLSEKTAWALAMDR---GVNMVSINAGLLMGPS 197 (297)
T ss_pred ccCCCCCCCCcccCCC---HHHHhhcccHHHHHHHHHHHHHHHHHHHh---CCcEEEEcCCcccCCC
Confidence 10 00 111111111 000 011269999999999999887654 7999999999998 54
No 229
>PLN02650 dihydroflavonol-4-reductase
Probab=99.61 E-value=3.1e-14 Score=127.72 Aligned_cols=189 Identities=10% Similarity=-0.096 Sum_probs=124.5
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
+.|+++ ||||+ +.||..+ +.+|.+.|..|+ +|+.+........+.......++.++.+|+++.+.+++
T Consensus 4 ~~k~iL-VTGat------GfIGs~l---~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~ 73 (351)
T PLN02650 4 QKETVC-VTGAS------GFIGSWL---VMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDD 73 (351)
T ss_pred CCCEEE-EeCCc------HHHHHHH---HHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHH
Confidence 356777 99999 9999999 666777887776 47655444333222111102368899999999988877
Q ss_pred HHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
+++ .+|+|||+|+... .. ..+..+..+++|+.++.++++++.+.. .. .+||++||..........
T Consensus 74 ~~~-------~~d~ViH~A~~~~-~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~--~r~v~~SS~~~~~~~~~~ 138 (351)
T PLN02650 74 AIR-------GCTGVFHVATPMD-FE--SKDPENEVIKPTVNGMLSIMKACAKAK---TV--RRIVFTSSAGTVNVEEHQ 138 (351)
T ss_pred HHh-------CCCEEEEeCCCCC-CC--CCCchhhhhhHHHHHHHHHHHHHHhcC---Cc--eEEEEecchhhcccCCCC
Confidence 754 3799999998642 11 123346789999999999999987642 12 699999998544322110
Q ss_pred CC-CCccccCcCC--CCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 182 DT-ISKSVLSVEN--YSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 182 ~~-~~~~~~~~~~--~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
.. +..+.+.... .....+...|+.||.+.+.+++.+++++ |++++.+.|+.|- +..
T Consensus 139 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 139 KPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---GLDFISIIPTLVVGPFI 198 (351)
T ss_pred CCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---CCeEEEECCCceECCCC
Confidence 00 0111110000 0000123479999999999999988764 7999999999988 643
No 230
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.61 E-value=1.2e-14 Score=128.10 Aligned_cols=175 Identities=9% Similarity=0.053 Sum_probs=118.2
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcC--cEEEEcCH---HHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS--KLFYQNCW---DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g--~~v~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
++ ||||+ ++||.+++++ |...| ..|++.+. ....+..+.+. ...++.++.+|++|++++.++
T Consensus 2 il-ItGat------G~iG~~l~~~---l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~ 68 (317)
T TIGR01181 2 IL-VTGGA------GFIGSNFVRY---ILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRL 68 (317)
T ss_pred EE-EEcCC------chHHHHHHHH---HHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHH
Confidence 55 99999 9999999554 54554 55654321 11111122221 123678899999999999888
Q ss_pred HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD 182 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~ 182 (292)
++.. ++|+|||+|+.... +.+.+..+..+++|+.++..+++++..... . .++|++||...........
T Consensus 69 ~~~~-----~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~--~~~i~~Ss~~v~g~~~~~~ 136 (317)
T TIGR01181 69 FTEH-----QPDAVVHFAAESHV--DRSISGPAAFIETNVVGTYTLLEAVRKYWH---E--FRFHHISTDEVYGDLEKGD 136 (317)
T ss_pred Hhhc-----CCCEEEEcccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---C--ceEEEeeccceeCCCCCCC
Confidence 7664 58999999997532 223455678899999999999987765432 2 5899999975443221100
Q ss_pred CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
....+ ....+...|+.+|.+.+.+++.++++. ++++..+.|+.+-
T Consensus 137 ~~~e~-------~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~ 181 (317)
T TIGR01181 137 AFTET-------TPLAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNY 181 (317)
T ss_pred CcCCC-------CCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEecccc
Confidence 01111 112255689999999999999988765 5889999999877
No 231
>PLN02240 UDP-glucose 4-epimerase
Probab=99.60 E-value=4.9e-14 Score=126.35 Aligned_cols=180 Identities=12% Similarity=0.069 Sum_probs=119.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhC--CCCceEEEEccCCChH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEK--PSAQCIAMELDLCRLK 97 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~ 97 (292)
.+.+++++ ||||+ ++||..+ +.+|.++|+.|++ |......+..+++.... ...++.++.+|+++.+
T Consensus 2 ~~~~~~vl-ItGat------G~iG~~l---~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 71 (352)
T PLN02240 2 SLMGRTIL-VTGGA------GYIGSHT---VLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKE 71 (352)
T ss_pred CCCCCEEE-EECCC------ChHHHHH---HHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHH
Confidence 46788988 99999 9999999 5556677877764 32211111222222211 1346888999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
++.+++++. .+|+|||+||.... ..+.++.+..+++|+.++..+++++. +.+. .++|++||...+ +
T Consensus 72 ~l~~~~~~~-----~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--~~~v~~Ss~~vy-g 137 (352)
T PLN02240 72 ALEKVFAST-----RFDAVIHFAGLKAV--GESVAKPLLYYDNNLVGTINLLEVMA----KHGC--KKLVFSSSATVY-G 137 (352)
T ss_pred HHHHHHHhC-----CCCEEEEccccCCc--cccccCHHHHHHHHHHHHHHHHHHHH----HcCC--CEEEEEccHHHh-C
Confidence 998887653 69999999997532 12445678899999999999888653 3333 689999996543 2
Q ss_pred cCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCC
Q psy4251 178 YITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCC 234 (292)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG 234 (292)
......++. +....+...|+.+|.+.+.+++.++.+.. ++.+..+.|+
T Consensus 138 ~~~~~~~~E-------~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~~R~~ 185 (352)
T PLN02240 138 QPEEVPCTE-------EFPLSATNPYGRTKLFIEEICRDIHASDP--EWKIILLRYF 185 (352)
T ss_pred CCCCCCCCC-------CCCCCCCCHHHHHHHHHHHHHHHHHHhcC--CCCEEEEeec
Confidence 211111111 22233567899999999999998876522 4666666554
No 232
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.60 E-value=5.9e-14 Score=129.32 Aligned_cols=195 Identities=8% Similarity=-0.035 Sum_probs=129.3
Q ss_pred CCCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--c---CHHH----H---------HHHHHHHHhh
Q psy4251 19 PASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--N---CWDK----A---------NDAISKILTE 80 (292)
Q Consensus 19 ~~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r---~~~~----~---------~~~~~~l~~~ 80 (292)
...++++++++ ||||+ ++||..+ +.+|.+.|+.|++ + .... . .+..+.+.+.
T Consensus 41 ~~~~~~~k~VL-VTGat------GfIGs~L---v~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 110 (442)
T PLN02572 41 SSSSSKKKKVM-VIGGD------GYCGWAT---ALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV 110 (442)
T ss_pred CCccccCCEEE-EECCC------cHHHHHH---HHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh
Confidence 35778999998 99999 9999999 6667777877764 1 1100 0 0111112111
Q ss_pred CCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccccCC-CCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhc
Q psy4251 81 KPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGL-GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKG 159 (292)
Q Consensus 81 ~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~ 159 (292)
.+.++.++.+|++|.+++.++++++ ++|+|||+|+.... ....+.++++..+++|+.|+.++++++...-
T Consensus 111 -~~~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--- 181 (442)
T PLN02572 111 -SGKEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--- 181 (442)
T ss_pred -hCCcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 1346889999999999998888764 58999999976432 2233445567788999999999999876531
Q ss_pred CCCCcEEEEEcCcccccccCC---CCCCCccccCcCC--CCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCC
Q psy4251 160 AKLFARVVVVSSESHRYSYIT---KDTISKSVLSVEN--YSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCC 234 (292)
Q Consensus 160 ~~~~~~iV~vsS~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG 234 (292)
.. .++|++||...+..... ...+..+....+. .....+...|+.||.+.+.+++.+++.+ |+.+..+.|+
T Consensus 182 v~--~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~v~lR~~ 256 (442)
T PLN02572 182 PD--CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG 256 (442)
T ss_pred CC--ccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCEEEEecc
Confidence 12 48999999865532110 0000000000000 0122345689999999999998877664 6999999999
Q ss_pred ccc
Q psy4251 235 WKI 237 (292)
Q Consensus 235 ~v~ 237 (292)
.|-
T Consensus 257 ~vy 259 (442)
T PLN02572 257 VVY 259 (442)
T ss_pred ccc
Confidence 987
No 233
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.60 E-value=2.7e-14 Score=128.23 Aligned_cols=184 Identities=10% Similarity=0.074 Sum_probs=121.5
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcE-EE-EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKL-FY-QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~-v~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
++++ ||||+ ++||..+ +.+|..+|.. ++ .++..+... ...+....++.++.++++|++|.+++++++
T Consensus 2 ~~vl-VtGat------GfIG~~l---~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 70 (355)
T PRK10217 2 RKIL-ITGGA------GFIGSAL---VRYIINETSDAVVVVDKLTYAGN-LMSLAPVAQSERFAFEKVDICDRAELARVF 70 (355)
T ss_pred cEEE-EEcCC------cHHHHHH---HHHHHHcCCCEEEEEecCccccc-hhhhhhcccCCceEEEECCCcChHHHHHHH
Confidence 4577 99999 9999999 6666677754 32 232211111 111111112346888999999999988887
Q ss_pred HHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHH---hcCCCCcEEEEEcCcccccccCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALI---KGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~---~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
+.. ++|+|||+||.... ..+.++++..+++|+.++..+++++.+.+. +......++|++||.+.+.....
T Consensus 71 ~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~ 143 (355)
T PRK10217 71 TEH-----QPDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHS 143 (355)
T ss_pred hhc-----CCCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCC
Confidence 652 59999999997532 223456788999999999999999987542 11110158999999754432110
Q ss_pred CC-CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 181 KD-TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 181 ~~-~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
.. .+.. .....+...|+.||.+.+.+++.+++++ ++++..+.|+.+-
T Consensus 144 ~~~~~~E-------~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~ 191 (355)
T PRK10217 144 TDDFFTE-------TTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNY 191 (355)
T ss_pred CCCCcCC-------CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeee
Confidence 00 0111 1122356789999999999999998776 4777888888776
No 234
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.59 E-value=8.8e-14 Score=124.87 Aligned_cols=189 Identities=14% Similarity=-0.036 Sum_probs=125.0
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
-++++++ ||||+ +.||..+ +.+|.+.|+.|++ |+.++.+....++.. +.++.++++|+++.+++.
T Consensus 8 ~~~~~vL-VtG~~------GfIG~~l---~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~ 74 (353)
T PLN02896 8 SATGTYC-VTGAT------GYIGSWL---VKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFD 74 (353)
T ss_pred cCCCEEE-EECCC------cHHHHHH---HHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHH
Confidence 3567888 99999 9999999 6667778887764 776655554444421 347889999999998887
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCC---CCcch--hhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSH---TEDGF--ETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~---~~~~~--~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
++++ .+|+|||+|+........ +.+.+ ...+++|+.++..+++++.+.. .. ++||++||.+.+
T Consensus 75 ~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~--~~~v~~SS~~vy 142 (353)
T PLN02896 75 EAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TV--KRVVFTSSISTL 142 (353)
T ss_pred HHHc-------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---Cc--cEEEEEechhhc
Confidence 7753 479999999976432211 22222 3455667789999988876542 23 699999998665
Q ss_pred cccCCCC----CCCccccCcCC--CCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 176 YSYITKD----TISKSVLSVEN--YSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 176 ~~~~~~~----~~~~~~~~~~~--~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
....... .++.+...+-. ....++...|+.||.+.+.+++.++++. |+.+.++.|+.|- +.
T Consensus 143 g~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~ 210 (353)
T PLN02896 143 TAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPF 210 (353)
T ss_pred cccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCC
Confidence 4321100 01111111100 0000123479999999999999888765 6999999999888 54
No 235
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.59 E-value=3.4e-14 Score=127.08 Aligned_cols=168 Identities=11% Similarity=-0.019 Sum_probs=112.4
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHH-----HHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWD-----KANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
|+++ ||||+ +.||..+ +.+|.+.|+.|++ |+.+ ..+...+++.. ..+..+.++++|++|.++
T Consensus 1 ~~vl-VTGat------GfIG~~l---~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~ 69 (343)
T TIGR01472 1 KIAL-ITGIT------GQDGSYL---AEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHN-VNKARMKLHYGDLTDSSN 69 (343)
T ss_pred CeEE-EEcCC------CcHHHHH---HHHHHHCCCEEEEEecCCcccchhhhhhhhhcccc-ccccceeEEEeccCCHHH
Confidence 4677 99999 9999999 6667778877764 5432 22222111111 012468899999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
+.++++.+ ++|+|||+|+...... ..+.-...+++|+.|+..+++++.+.-.+ +. .++|++||...+...
T Consensus 70 l~~~~~~~-----~~d~ViH~Aa~~~~~~--~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~--~~~v~~SS~~vyg~~ 139 (343)
T TIGR01472 70 LRRIIDEI-----KPTEIYNLAAQSHVKV--SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KS--VKFYQASTSELYGKV 139 (343)
T ss_pred HHHHHHhC-----CCCEEEECCcccccch--hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cC--eeEEEeccHHhhCCC
Confidence 98887775 4899999999764321 22223567789999999999998764211 11 489999998655322
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY 222 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~ 222 (292)
. ....+. .....+...|+.||.+.+.+++.+++++.
T Consensus 140 ~-~~~~~E-------~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~ 175 (343)
T TIGR01472 140 Q-EIPQNE-------TTPFYPRSPYAAAKLYAHWITVNYREAYG 175 (343)
T ss_pred C-CCCCCC-------CCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence 1 001111 12233567899999999999999988763
No 236
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.57 E-value=1.5e-13 Score=122.55 Aligned_cols=187 Identities=12% Similarity=-0.067 Sum_probs=122.0
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
++++++ ||||+ +.||..+ +.+|.+.|+.|+ +|+.+...... .+.......++.++.+|++|.+++.+
T Consensus 8 ~~~~vl-ItG~~------GfIG~~l---~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~ 76 (338)
T PLN00198 8 GKKTAC-VIGGT------GFLASLL---IKLLLQKGYAVNTTVRDPENQKKIA-HLRALQELGDLKIFGADLTDEESFEA 76 (338)
T ss_pred CCCeEE-EECCc------hHHHHHH---HHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCCCCceEEEEcCCCChHHHHH
Confidence 478888 99999 9999999 556667787774 46643322211 11111001268889999999988777
Q ss_pred HHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC-
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT- 180 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~- 180 (292)
+++ ++|+|||+|+... ....+.....+++|+.++..+++++.+. ... ++||++||.+.+.....
T Consensus 77 ~~~-------~~d~vih~A~~~~---~~~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~--~~~v~~SS~~~~g~~~~~ 141 (338)
T PLN00198 77 PIA-------GCDLVFHVATPVN---FASEDPENDMIKPAIQGVHNVLKACAKA---KSV--KRVILTSSAAAVSINKLS 141 (338)
T ss_pred HHh-------cCCEEEEeCCCCc---cCCCChHHHHHHHHHHHHHHHHHHHHhc---CCc--cEEEEeecceeeeccCCC
Confidence 653 4799999998531 1122334567899999999999997653 123 79999999866542210
Q ss_pred --CCCCCccccCcC--CCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 181 --KDTISKSVLSVE--NYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 181 --~~~~~~~~~~~~--~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
....+.+.+..+ .....++...|+.||.+.+.+++.+++++ |+.++.+.|+.|- +-
T Consensus 142 ~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 142 GTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPS 202 (338)
T ss_pred CCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCC
Confidence 000011100000 00011256679999999999999988764 6999999999998 53
No 237
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.55 E-value=1.5e-13 Score=123.33 Aligned_cols=187 Identities=10% Similarity=0.075 Sum_probs=119.2
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcE-EEE--cCH--HHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKL-FYQ--NCW--DKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~-v~~--r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
+++ ||||+ ++||..+ +.+|.+.|.. |+. +.. ...+ .+....++.++.++.+|++|.+++.+
T Consensus 2 kil-ITGgt------G~iG~~l---~~~L~~~g~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~ 67 (352)
T PRK10084 2 KIL-VTGGA------GFIGSAV---VRHIINNTQDSVVNVDKLTYAGNLE----SLADVSDSERYVFEHADICDRAELDR 67 (352)
T ss_pred eEE-EECCC------cHHhHHH---HHHHHHhCCCeEEEecCCCccchHH----HHHhcccCCceEEEEecCCCHHHHHH
Confidence 466 99999 9999999 5556566643 432 211 1111 12222223467889999999999988
Q ss_pred HHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC---CCCcEEEEEcCccccccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA---KLFARVVVVSSESHRYSY 178 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~---~~~~~iV~vsS~~~~~~~ 178 (292)
++++. .+|+|||+||..... ...++.+..+++|+.++.++++++.+.+.+.. ....++|++||...+...
T Consensus 68 ~~~~~-----~~d~vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~ 140 (352)
T PRK10084 68 IFAQH-----QPDAVMHLAAESHVD--RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDL 140 (352)
T ss_pred HHHhc-----CCCEEEECCcccCCc--chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCC
Confidence 87652 699999999975321 12234577899999999999999987753211 101589999997554321
Q ss_pred CCCCCCC-cccc-CcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 179 ITKDTIS-KSVL-SVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 179 ~~~~~~~-~~~~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
....+.. .... ..+++..+.+...|+.||.+.+.+++.+++++ |+.+..+.|+.|-
T Consensus 141 ~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~ 198 (352)
T PRK10084 141 PHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNY 198 (352)
T ss_pred CccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccee
Confidence 1000000 0000 00112234466789999999999999998775 4666667777665
No 238
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.54 E-value=2.4e-13 Score=120.38 Aligned_cols=187 Identities=13% Similarity=-0.017 Sum_probs=121.3
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhC-CCCceEEEEccCCChHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEK-PSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dls~~~~v~ 100 (292)
+|++++ ||||+ +.||..+ +.+|.+.|+.|. +|+....... ..+.... ...++.++++|+++.+++.
T Consensus 3 ~~~~il-VtGat------GfIG~~l---~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 71 (322)
T PLN02662 3 EGKVVC-VTGAS------GYIASWL---VKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFD 71 (322)
T ss_pred CCCEEE-EECCh------HHHHHHH---HHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHH
Confidence 578888 99999 9999999 666777888775 4664432222 2222111 1247889999999998877
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc-cccC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR-YSYI 179 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~-~~~~ 179 (292)
.+++ .+|+|||+|+..... ..+..+..+++|+.++..+++++.... .. .+||++||.++. .+..
T Consensus 72 ~~~~-------~~d~Vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~--~~~v~~SS~~~~~y~~~ 136 (322)
T PLN02662 72 SVVD-------GCEGVFHTASPFYHD---VTDPQAELIDPAVKGTLNVLRSCAKVP---SV--KRVVVTSSMAAVAYNGK 136 (322)
T ss_pred HHHc-------CCCEEEEeCCcccCC---CCChHHHHHHHHHHHHHHHHHHHHhCC---CC--CEEEEccCHHHhcCCCc
Confidence 6654 479999999975311 112235788999999999999876431 23 699999998642 2211
Q ss_pred CC-C--CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 180 TK-D--TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 180 ~~-~--~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
+. . .++.+.... ....-.....|+.+|.+.+.+++.+.++. |++++.+.|+.+- +..
T Consensus 137 ~~~~~~~~~E~~~~~-p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~ 197 (322)
T PLN02662 137 PLTPDVVVDETWFSD-PAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLL 197 (322)
T ss_pred CCCCCCcCCcccCCC-hhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCC
Confidence 10 0 011111000 00000012479999999999988877654 6999999999998 643
No 239
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.52 E-value=3.3e-13 Score=113.47 Aligned_cols=179 Identities=12% Similarity=0.105 Sum_probs=126.8
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC---HHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC---WDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
+++ ||||. +=||....+.+...-.. .+|++-+ -..-.+....+. ...++.|+++|++|.+.+.+++
T Consensus 2 ~iL-VTGGa------GFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~~~v~~~~ 70 (340)
T COG1088 2 KIL-VTGGA------GFIGSNFVRYILNKHPD-DHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDRELVDRLF 70 (340)
T ss_pred cEE-EecCc------chHHHHHHHHHHhcCCC-ceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCHHHHHHHH
Confidence 466 99999 88888887766555443 3333211 111111122222 2459999999999999999888
Q ss_pred HHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCC
Q psy4251 104 EEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDT 183 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~ 183 (292)
++. .+|++||-|+-.+ -+.+.++-+.-+++|++|++.|+++...+..+ -|++.||+...+...
T Consensus 71 ~~~-----~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-----frf~HISTDEVYG~l----- 133 (340)
T COG1088 71 KEY-----QPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-----FRFHHISTDEVYGDL----- 133 (340)
T ss_pred Hhc-----CCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhccc-----ceEEEeccccccccc-----
Confidence 775 6999999998764 34456666788999999999999999877631 389999998655432
Q ss_pred CCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 184 ISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
..++....+..++++.+.|++||++..++++++.+.+ |+.+...++..--
T Consensus 134 -~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNY 183 (340)
T COG1088 134 -GLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNY 183 (340)
T ss_pred -cCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCc
Confidence 1221112245678889999999999999999999987 4777777766433
No 240
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.47 E-value=2.2e-12 Score=114.98 Aligned_cols=177 Identities=12% Similarity=0.066 Sum_probs=113.7
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ ++||..+ +.+|.+.|+.|++ |..+........+.+. ++.++.++.+|++|.+++.++++
T Consensus 2 ~vl-VtGat------G~iG~~l---~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~ 70 (338)
T PRK10675 2 RVL-VTGGS------GYIGSHT---CVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILH 70 (338)
T ss_pred eEE-EECCC------ChHHHHH---HHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHh
Confidence 466 99999 9999999 5556677877764 3211122222223222 23467888999999998888765
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTI 184 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~ 184 (292)
. .++|+|||+||...... ..+.....+++|+.++..+++++. +.+. .+||++||...+... ....+
T Consensus 71 ~-----~~~d~vvh~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--~~~v~~Ss~~~yg~~-~~~~~ 136 (338)
T PRK10675 71 D-----HAIDTVIHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMR----AANV--KNLIFSSSATVYGDQ-PKIPY 136 (338)
T ss_pred c-----CCCCEEEECCccccccc--hhhCHHHHHHHHHHHHHHHHHHHH----HcCC--CEEEEeccHHhhCCC-CCCcc
Confidence 4 36999999999753211 223456788999999999887654 3344 689999997544221 11111
Q ss_pred CccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCcc
Q psy4251 185 SKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWK 236 (292)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v 236 (292)
+.+... ..+...|+.+|.+.+.+++.++++.. ++++..+.|+.+
T Consensus 137 ~E~~~~------~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v 180 (338)
T PRK10675 137 VESFPT------GTPQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNP 180 (338)
T ss_pred ccccCC------CCCCChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeee
Confidence 111110 02456899999999999999876643 356666655433
No 241
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.46 E-value=2.2e-12 Score=115.58 Aligned_cols=181 Identities=10% Similarity=-0.005 Sum_probs=120.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhC---CCCceEEEEccCCC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEK---PSAQCIAMELDLCR 95 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dls~ 95 (292)
..+++++++ ||||+ +=||..+ +.+|..+|..|++ |..........++.... ...++.++.+|+.|
T Consensus 11 ~~~~~~~vl-VtGat------GfiG~~l---v~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 11 LVLAPKRWL-ITGVA------GFIGSGL---LEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred ccccCCEEE-EECCc------cHHHHHH---HHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 456778988 99999 7777777 7777778877764 43222111122221111 11368899999999
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
.+++.++++ .+|+|||.|+...... ..++.+..+++|+.|+..+++.+.. .+. .++|++||...+
T Consensus 81 ~~~l~~~~~-------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~----~~~--~~~v~~SS~~vy 145 (348)
T PRK15181 81 FTDCQKACK-------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARD----AHV--SSFTYAASSSTY 145 (348)
T ss_pred HHHHHHHhh-------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHH----cCC--CeEEEeechHhh
Confidence 887766653 3799999999754322 2233456799999999999988743 233 699999997655
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
..... ..+.. +....+...|+.||.+.+.+++.++++. |+++..+.|+.+-
T Consensus 146 g~~~~-~~~~e-------~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vy 196 (348)
T PRK15181 146 GDHPD-LPKIE-------ERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVF 196 (348)
T ss_pred CCCCC-CCCCC-------CCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEeccee
Confidence 32211 00111 1112255689999999999998876654 6899999999887
No 242
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.45 E-value=2.2e-12 Score=114.15 Aligned_cols=174 Identities=14% Similarity=0.105 Sum_probs=117.0
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
++ ||||+ ++||..+ +..|.+.|..|+. |......+....+.+. .++..+.+|+++.+++.++++.
T Consensus 2 vl-V~Gat------G~iG~~l---~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~ 68 (328)
T TIGR01179 2 IL-VTGGA------GYIGSHT---VRQLLESGHEVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEE 68 (328)
T ss_pred EE-EeCCC------CHHHHHH---HHHHHhCCCeEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHh
Confidence 55 99999 9999999 5556677777764 2221111112222211 2577889999999999888764
Q ss_pred HHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCC
Q psy4251 106 YQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS 185 (292)
Q Consensus 106 ~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~ 185 (292)
.++|++|||||...... +.+.....+.+|+.++..+++++. +.+. .++|++||...+... ......
T Consensus 69 -----~~~d~vv~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--~~~v~~ss~~~~g~~-~~~~~~ 134 (328)
T TIGR01179 69 -----HKIDAVIHFAGLIAVGE--SVQDPLKYYRNNVVNTLNLLEAMQ----QTGV--KKFIFSSSAAVYGEP-SSIPIS 134 (328)
T ss_pred -----CCCcEEEECccccCcch--hhcCchhhhhhhHHHHHHHHHHHH----hcCC--CEEEEecchhhcCCC-CCCCcc
Confidence 46999999999763222 333456788999999999988754 2333 699999886544221 111111
Q ss_pred ccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 186 KSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 186 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
. +....+...|+.+|.+.+.+++.++++. .++++..+.|+.+-
T Consensus 135 e-------~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~ 177 (328)
T TIGR01179 135 E-------DSPLGPINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVA 177 (328)
T ss_pred c-------cCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCccc
Confidence 1 1122255689999999999999987663 26889999998776
No 243
>KOG1502|consensus
Probab=99.44 E-value=4.2e-12 Score=109.79 Aligned_cols=185 Identities=12% Similarity=-0.043 Sum_probs=130.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHH--HHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKAND--AISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.++++. ||||+ +=||..+ +..|+.+|+.|.+ |+++.-+. .+.++... +.+...+..||.++++.
T Consensus 5 ~~~~Vc-VTGAs------GfIgswi---vk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf 72 (327)
T KOG1502|consen 5 EGKKVC-VTGAS------GFIGSWI---VKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSF 72 (327)
T ss_pred CCcEEE-EeCCc------hHHHHHH---HHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchH
Confidence 566777 99999 5566666 8889999999974 88766333 24444433 44699999999999998
Q ss_pred HHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchh-hhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFE-TTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~-~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
++.++. .|+|+|.|..+.. +.++.+ +.+...+.|+.++++++...- .- -|||++||.++....
T Consensus 73 ~~ai~g-------cdgVfH~Asp~~~----~~~~~e~~li~pav~Gt~nVL~ac~~~~---sV--krvV~TSS~aAv~~~ 136 (327)
T KOG1502|consen 73 DKAIDG-------CDGVFHTASPVDF----DLEDPEKELIDPAVKGTKNVLEACKKTK---SV--KRVVYTSSTAAVRYN 136 (327)
T ss_pred HHHHhC-------CCEEEEeCccCCC----CCCCcHHhhhhHHHHHHHHHHHHHhccC---Cc--ceEEEeccHHHhccC
Confidence 888654 7999999997632 111133 688889999999999876432 23 799999999887654
Q ss_pred CCCC----CCCccccCcCCCCCC--hhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 179 ITKD----TISKSVLSVENYSDF--WAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 179 ~~~~----~~~~~~~~~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
.+.. .++.+.++. ..| .....|+.||...+.-++.++++. |+...+|+||.|- +....
T Consensus 137 ~~~~~~~~vvdE~~wsd---~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv~inP~lV~GP~l~~ 201 (327)
T KOG1502|consen 137 GPNIGENSVVDEESWSD---LDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLVTINPGLVFGPGLQP 201 (327)
T ss_pred CcCCCCCcccccccCCc---HHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEEEecCCceECCCccc
Confidence 2211 122222221 000 012579999999999999999886 6999999999999 65554
No 244
>PLN02686 cinnamoyl-CoA reductase
Probab=99.44 E-value=8.7e-12 Score=112.51 Aligned_cols=190 Identities=9% Similarity=-0.096 Sum_probs=122.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhC----CCCceEEEEccCC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEK----PSAQCIAMELDLC 94 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dls 94 (292)
.+.++|+++ ||||+ ++||..+ +.+|.+.|+.|+ .|+.+..+.+ +++.... ....+.++++|++
T Consensus 49 ~~~~~k~VL-VTGat------GfIG~~l---v~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~ 117 (367)
T PLN02686 49 ADAEARLVC-VTGGV------SFLGLAI---VDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLT 117 (367)
T ss_pred cCCCCCEEE-EECCc------hHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCC
Confidence 456788988 99999 9999999 666778888875 4776554443 2332110 0135788999999
Q ss_pred ChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy4251 95 RLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESH 174 (292)
Q Consensus 95 ~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~ 174 (292)
|.+++.++++. +|.++|.|+...+..... ......++|+.++..+++++... .+. .|+|++||..+
T Consensus 118 d~~~l~~~i~~-------~d~V~hlA~~~~~~~~~~--~~~~~~~~nv~gt~~llea~~~~---~~v--~r~V~~SS~~~ 183 (367)
T PLN02686 118 EPESLHEAFDG-------CAGVFHTSAFVDPAGLSG--YTKSMAELEAKASENVIEACVRT---ESV--RKCVFTSSLLA 183 (367)
T ss_pred CHHHHHHHHHh-------ccEEEecCeeeccccccc--ccchhhhhhHHHHHHHHHHHHhc---CCc--cEEEEeccHHH
Confidence 99988877653 689999988764322111 11244677888888888876432 123 69999999742
Q ss_pred -cccc--CCC--CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 175 -RYSY--ITK--DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 175 -~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
..+. ... ..++.+.+.. ......+...|+.||.+.+.+++.++++. |++++++.|+.|- +-
T Consensus 184 ~vyg~~~~~~~~~~i~E~~~~~-~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 184 CVWRQNYPHDLPPVIDEESWSD-ESFCRDNKLWYALGKLKAEKAAWRAARGK---GLKLATICPALVTGPG 250 (367)
T ss_pred hcccccCCCCCCcccCCCCCCC-hhhcccccchHHHHHHHHHHHHHHHHHhc---CceEEEEcCCceECCC
Confidence 2211 000 0011111111 00011134579999999999999887763 7999999999999 53
No 245
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.42 E-value=6.2e-12 Score=107.55 Aligned_cols=170 Identities=14% Similarity=0.045 Sum_probs=104.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++.++++++ ||||+ ++||+.+ +.+|...|+.|+ .|+.++..+.. .. +.++.++++|+++..
T Consensus 13 ~~~~~~~il-ItGas------G~iG~~l---~~~L~~~g~~V~~~~R~~~~~~~~~----~~--~~~~~~~~~Dl~d~~- 75 (251)
T PLN00141 13 ENVKTKTVF-VAGAT------GRTGKRI---VEQLLAKGFAVKAGVRDVDKAKTSL----PQ--DPSLQIVRADVTEGS- 75 (251)
T ss_pred ccccCCeEE-EECCC------cHHHHHH---HHHHHhCCCEEEEEecCHHHHHHhc----cc--CCceEEEEeeCCCCH-
Confidence 456788888 99999 9999999 555667787775 47776544322 11 236888999999842
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
..+.+.+. ..+|+||+|+|..... + ....+.+|+.+...+++++. +.+. ++||++||.......
T Consensus 76 -~~l~~~~~---~~~d~vi~~~g~~~~~---~---~~~~~~~n~~~~~~ll~a~~----~~~~--~~iV~iSS~~v~g~~ 139 (251)
T PLN00141 76 -DKLVEAIG---DDSDAVICATGFRRSF---D---PFAPWKVDNFGTVNLVEACR----KAGV--TRFILVSSILVNGAA 139 (251)
T ss_pred -HHHHHHhh---cCCCEEEECCCCCcCC---C---CCCceeeehHHHHHHHHHHH----HcCC--CEEEEEccccccCCC
Confidence 22222221 2699999999864211 1 12235788888888888763 3344 799999998643221
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHH-HHHHHhH-hcCCCeEEEEecCCccc-cc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLF-GEKLATL-WYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~~-~~~~gi~v~~v~PG~v~-~~ 239 (292)
... + ....|...|.....+ .+..+.+ +...|++++.|.||++. +.
T Consensus 140 ~~~---------~-------~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~ 187 (251)
T PLN00141 140 MGQ---------I-------LNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDP 187 (251)
T ss_pred ccc---------c-------cCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCC
Confidence 000 0 112344434322222 1212221 34558999999999998 54
No 246
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.42 E-value=4.9e-12 Score=112.04 Aligned_cols=169 Identities=14% Similarity=-0.034 Sum_probs=115.6
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ ++||..+ +..|.+.|+.|++ |+.+... .+. ...+.++++|+++.+++.++++
T Consensus 2 ~vl-ItG~~------G~iG~~l---~~~L~~~g~~V~~~~r~~~~~~----~~~----~~~~~~~~~D~~~~~~l~~~~~ 63 (328)
T TIGR03466 2 KVL-VTGAT------GFVGSAV---VRLLLEQGEEVRVLVRPTSDRR----NLE----GLDVEIVEGDLRDPASLRKAVA 63 (328)
T ss_pred eEE-EECCc------cchhHHH---HHHHHHCCCEEEEEEecCcccc----ccc----cCCceEEEeeCCCHHHHHHHHh
Confidence 566 99999 9999999 5556677777764 5543321 111 2357889999999988777654
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTI 184 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~ 184 (292)
.+|+|||+|+... ...++.+..+++|+.++..+++++.. ... +++|++||............+
T Consensus 64 -------~~d~vi~~a~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--~~~v~~SS~~~~~~~~~~~~~ 126 (328)
T TIGR03466 64 -------GCRALFHVAADYR----LWAPDPEEMYAANVEGTRNLLRAALE----AGV--ERVVYTSSVATLGVRGDGTPA 126 (328)
T ss_pred -------CCCEEEEeceecc----cCCCCHHHHHHHHHHHHHHHHHHHHH----hCC--CeEEEEechhhcCcCCCCCCc
Confidence 4799999998542 12345678899999999999888653 233 799999998665421110111
Q ss_pred CccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 185 SKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
+.+.... .......|+.+|.+.+.+++.++.+. |+++..+.|+.+-
T Consensus 127 ~e~~~~~----~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~~~ 172 (328)
T TIGR03466 127 DETTPSS----LDDMIGHYKRSKFLAEQAALEMAAEK---GLPVVIVNPSTPI 172 (328)
T ss_pred CccCCCC----cccccChHHHHHHHHHHHHHHHHHhc---CCCEEEEeCCccC
Confidence 1111100 00123479999999999999887653 6889999999876
No 247
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.40 E-value=2.6e-12 Score=111.41 Aligned_cols=179 Identities=13% Similarity=-0.034 Sum_probs=118.0
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcC--cEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSS--KLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g--~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
|||||+ +=||..+ +.+|.+.| ..|-+.+..........+.. .....++++|++|.+++.++++
T Consensus 1 LVTGgs------GflG~~i---v~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~---~~~~~~~~~Di~d~~~l~~a~~--- 65 (280)
T PF01073_consen 1 LVTGGS------GFLGSHI---VRQLLERGYIYEVRVLDRSPPPKFLKDLQK---SGVKEYIQGDITDPESLEEALE--- 65 (280)
T ss_pred CEEcCC------cHHHHHH---HHHHHHCCCceEEEEcccccccccchhhhc---ccceeEEEeccccHHHHHHHhc---
Confidence 499999 7788888 77777888 44443222111111112211 1233389999999999988765
Q ss_pred HhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCC-c
Q psy4251 108 KKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS-K 186 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~-~ 186 (292)
..|+|||+|+...... ....+..+++|+.|+-++++++... +- .|+|++||.++........++. .
T Consensus 66 ----g~d~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~----~V--krlVytSS~~vv~~~~~~~~~~~~ 132 (280)
T PF01073_consen 66 ----GVDVVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKA----GV--KRLVYTSSISVVFDNYKGDPIING 132 (280)
T ss_pred ----CCceEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHc----CC--CEEEEEcCcceeEeccCCCCcccC
Confidence 4699999999764322 3456789999999999999988642 34 7999999998876522211211 1
Q ss_pred cccCcCCCCCChhhhHHHHhHHHHHHHHHHHHh-Hhc-CCCeEEEEecCCccc-cc
Q psy4251 187 SVLSVENYSDFWAMTAYNDTKLCNVLFGEKLAT-LWY-KYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 187 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~-~~~-~~gi~v~~v~PG~v~-~~ 239 (292)
+...+ ........|+.||+..+.++..... .+. ...++..+|+|..|- +-
T Consensus 133 dE~~~---~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~ 185 (280)
T PF01073_consen 133 DEDTP---YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPG 185 (280)
T ss_pred CcCCc---ccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcc
Confidence 11111 1111456899999999999887665 221 124899999999888 53
No 248
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.35 E-value=1.7e-11 Score=103.36 Aligned_cols=170 Identities=13% Similarity=0.042 Sum_probs=120.6
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
|||||+ +=||.++ +.+|.++|..|+ .|+.........+ .++.++.+|+.|.++++++++..
T Consensus 2 lI~Gat------G~iG~~l---~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~- 64 (236)
T PF01370_consen 2 LITGAT------GFIGSAL---VRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA- 64 (236)
T ss_dssp EEETTT------SHHHHHH---HHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-
T ss_pred EEEccC------CHHHHHH---HHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-
Confidence 499999 8899999 777778888865 3443322111111 17899999999999999998887
Q ss_pred HhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCcc
Q psy4251 108 KKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKS 187 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~ 187 (292)
.+|.|||+|+... ...+.+.....+..|+.+...+++.+.. .+. .++|++||...+... ....++.
T Consensus 65 ----~~d~vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~--~~~i~~sS~~~y~~~-~~~~~~e- 130 (236)
T PF01370_consen 65 ----NIDVVIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAARE----AGV--KRFIFLSSASVYGDP-DGEPIDE- 130 (236)
T ss_dssp ----TESEEEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHH----HTT--SEEEEEEEGGGGTSS-SSSSBET-
T ss_pred ----CceEEEEeecccc--cccccccccccccccccccccccccccc----ccc--ccccccccccccccc-ccccccc-
Confidence 6999999999753 1112245677788888888777777653 233 699999996544332 1111111
Q ss_pred ccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 188 VLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 188 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
.....+...|+.+|...+.+++.+.++. ++++..+.|+.+- +.
T Consensus 131 ------~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 131 ------DSPINPLSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG 174 (236)
T ss_dssp ------TSGCCHSSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred ------cccccccccccccccccccccccccccc---cccccccccccccccc
Confidence 1122366779999999999999988876 6999999999998 55
No 249
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.33 E-value=2.1e-11 Score=118.36 Aligned_cols=185 Identities=11% Similarity=0.015 Sum_probs=118.1
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhc--CcEEEEcCHH-HHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQS--SKLFYQNCWD-KANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~--g~~v~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
..++++++ ||||+ +-||..+ +.+|.+. ++.|++.+.. .... ...+.......++.++.+|++|.+.
T Consensus 3 ~~~~~~VL-VTGat------GfIG~~l---v~~Ll~~g~~~~V~~~d~~~~~~~-~~~l~~~~~~~~v~~~~~Dl~d~~~ 71 (668)
T PLN02260 3 TYEPKNIL-ITGAA------GFIASHV---ANRLIRNYPDYKIVVLDKLDYCSN-LKNLNPSKSSPNFKFVKGDIASADL 71 (668)
T ss_pred CCCCCEEE-EECCC------cHHHHHH---HHHHHHhCCCCEEEEEeCCCccch-hhhhhhcccCCCeEEEECCCCChHH
Confidence 34578888 99999 9999999 5555554 5666653311 0111 1112111113478899999999887
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
+..++.. ..+|+|||+|+...... ..++....+++|+.++..+++++... ... .++|++||...+...
T Consensus 72 ~~~~~~~-----~~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~v--kr~I~~SS~~vyg~~ 139 (668)
T PLN02260 72 VNYLLIT-----EGIDTIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKVT---GQI--RRFIHVSTDEVYGET 139 (668)
T ss_pred HHHHHhh-----cCCCEEEECCCccCchh--hhhCHHHHHHHHHHHHHHHHHHHHhc---CCC--cEEEEEcchHHhCCC
Confidence 7665422 36999999999763221 12233567889999999988876432 113 699999997654322
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
....... .. +.....+...|+.+|.+.+.+++.++++. ++.+..+.|+.|-
T Consensus 140 ~~~~~~~----~~-E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~Vy 190 (668)
T PLN02260 140 DEDADVG----NH-EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVY 190 (668)
T ss_pred ccccccC----cc-ccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECccccc
Confidence 1100000 00 01112245679999999999999887664 5888999999887
No 250
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.33 E-value=2e-11 Score=103.32 Aligned_cols=158 Identities=16% Similarity=0.103 Sum_probs=111.2
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEc-C-HHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQN-C-WDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r-~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||. +=||.-+ +.+|.+.|+.|++- | ...-.+....+ .+.+++.|+.|.+.++++++
T Consensus 2 ~iL-VtGGA------GYIGSHt---v~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~ 64 (329)
T COG1087 2 KVL-VTGGA------GYIGSHT---VRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFE 64 (329)
T ss_pred eEE-EecCc------chhHHHH---HHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHH
Confidence 456 99999 6777777 88888999888752 2 11111222111 26899999999999988887
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTI 184 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~ 184 (292)
+. +||.|||.||...-.. +.+.-.+.++.|+.|+..|++++... +. .+|||-||.+ ..+.+....+
T Consensus 65 ~~-----~idaViHFAa~~~VgE--Sv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv--~~~vFSStAa-vYG~p~~~PI 130 (329)
T COG1087 65 EN-----KIDAVVHFAASISVGE--SVQNPLKYYDNNVVGTLNLIEAMLQT----GV--KKFIFSSTAA-VYGEPTTSPI 130 (329)
T ss_pred hc-----CCCEEEECccccccch--hhhCHHHHHhhchHhHHHHHHHHHHh----CC--CEEEEecchh-hcCCCCCccc
Confidence 75 6999999999764322 44555788999999999999887544 33 5777766654 4444333233
Q ss_pred CccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc
Q psy4251 185 SKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY 222 (292)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~ 222 (292)
..+.... +.+.|+.||++.+.+.+.+++..+
T Consensus 131 ~E~~~~~-------p~NPYG~sKlm~E~iL~d~~~a~~ 161 (329)
T COG1087 131 SETSPLA-------PINPYGRSKLMSEEILRDAAKANP 161 (329)
T ss_pred CCCCCCC-------CCCcchhHHHHHHHHHHHHHHhCC
Confidence 3333322 778899999999999999988865
No 251
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.32 E-value=4.2e-11 Score=108.83 Aligned_cols=162 Identities=10% Similarity=-0.036 Sum_probs=111.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHH--HHHHHHhhCCCCceEEEEccCCCh
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKAND--AISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
..-++++++ ||||+ +.||..+ +.+|.++|+.|+ .|+..+.+. ..+++... ...+.++++|++|.
T Consensus 56 ~~~~~~kVL-VtGat------G~IG~~l---~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~ 123 (390)
T PLN02657 56 KEPKDVTVL-VVGAT------GYIGKFV---VRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDA 123 (390)
T ss_pred cCCCCCEEE-EECCC------cHHHHHH---HHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCH
Confidence 445677888 99999 9999999 555667787776 476654321 11222222 23688899999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRY 176 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~ 176 (292)
+++.++++.+. .++|+||||+|.... .....+++|+.++..+++++. +.+. .++|++||.....
T Consensus 124 ~~l~~~~~~~~---~~~D~Vi~~aa~~~~-------~~~~~~~vn~~~~~~ll~aa~----~~gv--~r~V~iSS~~v~~ 187 (390)
T PLN02657 124 DSLRKVLFSEG---DPVDVVVSCLASRTG-------GVKDSWKIDYQATKNSLDAGR----EVGA--KHFVLLSAICVQK 187 (390)
T ss_pred HHHHHHHHHhC---CCCcEEEECCccCCC-------CCccchhhHHHHHHHHHHHHH----HcCC--CEEEEEeeccccC
Confidence 99999887641 269999999885321 112345678888877777654 3344 7999999975331
Q ss_pred ccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 177 SYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
+...|..+|...+...+. ...+++...+.|+.+-
T Consensus 188 ----------------------p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~ 221 (390)
T PLN02657 188 ----------------------PLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFF 221 (390)
T ss_pred ----------------------cchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHh
Confidence 344678889888766543 2347999999998766
No 252
>PLN02427 UDP-apiose/xylose synthase
Probab=99.32 E-value=6.8e-11 Score=107.49 Aligned_cols=188 Identities=10% Similarity=-0.055 Sum_probs=115.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhc-CcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQS-SKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~-g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
+.++.++++ ||||+ +-||..+ +.+|.++ |+.|++ |+.++............ ..++.++.+|++|.+
T Consensus 10 ~~~~~~~Vl-VTGgt------GfIGs~l---v~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~ 78 (386)
T PLN02427 10 KPIKPLTIC-MIGAG------GFIGSHL---CEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDS 78 (386)
T ss_pred CcccCcEEE-EECCc------chHHHHH---HHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChH
Confidence 445556778 99999 8889888 6667666 466653 55443322211100001 236899999999998
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.+.++++ .+|+|||+|+...+... .++-...+..|+.++..+++++.. .. .++|++||...+..
T Consensus 79 ~l~~~~~-------~~d~ViHlAa~~~~~~~--~~~~~~~~~~n~~gt~~ll~aa~~-----~~--~r~v~~SS~~vYg~ 142 (386)
T PLN02427 79 RLEGLIK-------MADLTINLAAICTPADY--NTRPLDTIYSNFIDALPVVKYCSE-----NN--KRLIHFSTCEVYGK 142 (386)
T ss_pred HHHHHhh-------cCCEEEEcccccChhhh--hhChHHHHHHHHHHHHHHHHHHHh-----cC--CEEEEEeeeeeeCC
Confidence 8776653 37999999997643211 112234567899999888877642 12 68999999765432
Q ss_pred cCCCCCCCcccc-Cc--------CC--CCCC----hhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 178 YITKDTISKSVL-SV--------EN--YSDF----WAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 178 ~~~~~~~~~~~~-~~--------~~--~~~~----~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
... .....+.. .+ +. ...+ .+...|+.||.+.+.+++.+++. .|+.+..+.|+.|- +-
T Consensus 143 ~~~-~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 143 TIG-SFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 216 (386)
T ss_pred CcC-CCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCC
Confidence 110 00000000 00 00 0000 12346999999999999877654 36999999999998 53
No 253
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.31 E-value=4.8e-11 Score=107.12 Aligned_cols=180 Identities=12% Similarity=0.008 Sum_probs=110.3
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcC--cEEE--EcCHHH---HHHHHHHHHhhCC-----C-CceEEEEccCC
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS--KLFY--QNCWDK---ANDAISKILTEKP-----S-AQCIAMELDLC 94 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g--~~v~--~r~~~~---~~~~~~~l~~~~~-----~-~~~~~~~~Dls 94 (292)
++ ||||| ++||..+ +.+|.+.| ..|+ +|+.+. .+...+.+..... . .++.++.+|++
T Consensus 2 vl-vtGat------G~lG~~l---~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~ 71 (367)
T TIGR01746 2 VL-LTGAT------GFLGAYL---LEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLS 71 (367)
T ss_pred EE-Eeccc------hHHHHHH---HHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcC
Confidence 55 99999 9999999 55566666 4454 465331 1222222221110 1 47899999998
Q ss_pred ChHH--HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 95 RLKS--VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 95 ~~~~--v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
++.. -.....++. ..+|++||||+.... ...++..+.+|+.++..+++.+.. ... .++|++||.
T Consensus 72 ~~~~gl~~~~~~~~~---~~~d~vih~a~~~~~-----~~~~~~~~~~nv~g~~~ll~~a~~----~~~--~~~v~iSS~ 137 (367)
T TIGR01746 72 EPRLGLSDAEWERLA---ENVDTIVHNGALVNW-----VYPYSELRAANVLGTREVLRLAAS----GRA--KPLHYVSTI 137 (367)
T ss_pred cccCCcCHHHHHHHH---hhCCEEEeCCcEecc-----CCcHHHHhhhhhHHHHHHHHHHhh----CCC--ceEEEEccc
Confidence 7531 011122222 369999999997642 123567788999999988887643 233 569999998
Q ss_pred ccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-c
Q psy4251 173 SHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-T 238 (292)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~ 238 (292)
......... ....++... .........|+.+|.+.+.+++.++.. |++++.+.||.+. +
T Consensus 138 ~v~~~~~~~-~~~~~~~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~~----g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 138 SVLAAIDLS-TVTEDDAIV--TPPPGLAGGYAQSKWVAELLVREASDR----GLPVTIVRPGRILGN 197 (367)
T ss_pred cccCCcCCC-Ccccccccc--ccccccCCChHHHHHHHHHHHHHHHhc----CCCEEEECCCceeec
Confidence 665432110 001111000 000112457999999999888775543 7999999999998 5
No 254
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.23 E-value=1.5e-10 Score=101.87 Aligned_cols=165 Identities=9% Similarity=-0.017 Sum_probs=106.9
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcE-EE-EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKL-FY-QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~-v~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
|||||+ +-||..+ +.+|.+.|.. ++ .|+....... ..+.++|+.|..+.+.+++.+.
T Consensus 3 lVtGa~------GfiG~~l---~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~ 61 (308)
T PRK11150 3 IVTGGA------GFIGSNI---VKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIM 61 (308)
T ss_pred EEecCC------cHHHHHH---HHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHh
Confidence 499999 9999999 5556667763 33 3543221110 0123467877777777766654
Q ss_pred H--hCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCC
Q psy4251 108 K--KFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS 185 (292)
Q Consensus 108 ~--~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~ 185 (292)
+ .++++|+|||+||..... . . +-+..+++|+.++..+++++.. . + .++|++||...+..... ...+
T Consensus 62 ~~~~~~~~d~Vih~A~~~~~~-~--~-~~~~~~~~n~~~t~~ll~~~~~----~-~--~~~i~~SS~~vyg~~~~-~~~~ 129 (308)
T PRK11150 62 AGDDFGDIEAIFHEGACSSTT-E--W-DGKYMMDNNYQYSKELLHYCLE----R-E--IPFLYASSAATYGGRTD-DFIE 129 (308)
T ss_pred cccccCCccEEEECceecCCc-C--C-ChHHHHHHHHHHHHHHHHHHHH----c-C--CcEEEEcchHHhCcCCC-CCCc
Confidence 3 245799999999865322 1 1 2245789999998888888743 2 2 57999999865532211 0011
Q ss_pred ccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 186 KSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 186 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
+.....+...|+.+|.+.+.+++.++++. ++.+..+.|+.+-
T Consensus 130 -------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vy 171 (308)
T PRK11150 130 -------EREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQICGFRYFNVY 171 (308)
T ss_pred -------cCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeeeeec
Confidence 11122355689999999999988876553 5888899888777
No 255
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.22 E-value=2.7e-10 Score=100.39 Aligned_cols=167 Identities=10% Similarity=-0.028 Sum_probs=106.0
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCc-EEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-LFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEY 106 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~ 106 (292)
|||||+ +.||..+ +..|.+.|. .|++ |... .. .+.+. ....+..|+++.+.++.+.+.
T Consensus 2 lItGat------G~iG~~l---~~~L~~~g~~~v~~~~~~~~-~~----~~~~~----~~~~~~~d~~~~~~~~~~~~~- 62 (314)
T TIGR02197 2 IVTGGA------GFIGSNL---VKALNERGITDILVVDNLRD-GH----KFLNL----ADLVIADYIDKEDFLDRLEKG- 62 (314)
T ss_pred EEeCCc------chhhHHH---HHHHHHcCCceEEEEecCCC-ch----hhhhh----hheeeeccCcchhHHHHHHhh-
Confidence 499999 9999999 555667775 4543 3221 11 11111 113467888887776665543
Q ss_pred HHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCc
Q psy4251 107 QKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISK 186 (292)
Q Consensus 107 ~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~ 186 (292)
.+.++|+|||+|+... .+.++.+..+++|+.++..+++++... + .++|++||...+... . ..+..
T Consensus 63 --~~~~~D~vvh~A~~~~----~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~--~~~v~~SS~~vy~~~-~-~~~~e 127 (314)
T TIGR02197 63 --AFGKIEAIFHQGACSD----TTETDGEYMMENNYQYSKRLLDWCAEK-----G--IPFIYASSAATYGDG-E-AGFRE 127 (314)
T ss_pred --ccCCCCEEEECccccC----ccccchHHHHHHHHHHHHHHHHHHHHh-----C--CcEEEEccHHhcCCC-C-CCccc
Confidence 3457999999999643 123456778999999999999886532 2 689999997544321 1 11111
Q ss_pred cccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 187 SVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 187 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
++ ....+...|+.+|.+.+.+++....+.. .++.+..+.|+.+-
T Consensus 128 ~~------~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~lR~~~vy 171 (314)
T TIGR02197 128 GR------ELERPLNVYGYSKFLFDQYVRRRVLPEA-LSAQVVGLRYFNVY 171 (314)
T ss_pred cc------CcCCCCCHHHHHHHHHHHHHHHHhHhhc-cCCceEEEEEeecc
Confidence 11 0112456899999999999886433321 14678888887777
No 256
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.21 E-value=6.3e-10 Score=99.69 Aligned_cols=175 Identities=7% Similarity=-0.100 Sum_probs=109.6
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhc-CcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCC-ChHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQS-SKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLC-RLKSVKK 101 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~-g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls-~~~~v~~ 101 (292)
++++ ||||+ +=||..+ +.+|.+. |+.|++ |+.++.. ++ .+...+.++.+|+. +.+.+.+
T Consensus 2 ~~il-VtGat------GfiGs~l---~~~L~~~~~~~V~~~~r~~~~~~----~~---~~~~~~~~~~~Dl~~~~~~~~~ 64 (347)
T PRK11908 2 KKVL-ILGVN------GFIGHHL---SKRILETTDWEVYGMDMQTDRLG----DL---VNHPRMHFFEGDITINKEWIEY 64 (347)
T ss_pred cEEE-EECCC------cHHHHHH---HHHHHhCCCCeEEEEeCcHHHHH----Hh---ccCCCeEEEeCCCCCCHHHHHH
Confidence 3567 99999 8899999 5556554 567764 5443221 12 11346889999998 5555544
Q ss_pred HHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
++ .++|+|||+|+...+.. ..++-+..+++|+.++..+++++.. . + .++|++||...+.... .
T Consensus 65 ~~-------~~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~----~-~--~~~v~~SS~~vyg~~~-~ 127 (347)
T PRK11908 65 HV-------KKCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVK----Y-G--KHLVFPSTSEVYGMCP-D 127 (347)
T ss_pred HH-------cCCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHh----c-C--CeEEEEecceeeccCC-C
Confidence 32 24899999999754322 1233457789999999988887652 2 3 6999999986543221 1
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
..+..++...+.....++...|+.+|.+.+.+++.++.+. |+.+..+.|+.+-
T Consensus 128 ~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~v~ 180 (347)
T PRK11908 128 EEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE---GLNFTLFRPFNWI 180 (347)
T ss_pred cCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHc---CCCeEEEeeeeee
Confidence 1111111000000001134579999999999998887653 5778888887776
No 257
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.20 E-value=2.2e-10 Score=100.77 Aligned_cols=169 Identities=15% Similarity=0.060 Sum_probs=113.3
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
++ |||++ +=||..+ +.+|.+.|+.|.+ |...+..... ..+.++.+|+++.+.+...++.
T Consensus 3 IL-VtG~t------GfiG~~l---~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~ 63 (314)
T COG0451 3 IL-VTGGA------GFIGSHL---VERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKG 63 (314)
T ss_pred EE-EEcCc------ccHHHHH---HHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhc
Confidence 45 99999 8899888 7777777888875 4433322211 2578889999998544444333
Q ss_pred HHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCC
Q psy4251 106 YQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS 185 (292)
Q Consensus 106 ~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~ 185 (292)
. . |++||+|+.......... .....+.+|+.++..+++++.. ... .++|+.||.+...........+
T Consensus 64 ~----~--d~vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~----~~~--~~~v~~ss~~~~~~~~~~~~~~ 130 (314)
T COG0451 64 V----P--DAVIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARA----AGV--KRFVFASSVSVVYGDPPPLPID 130 (314)
T ss_pred C----C--CEEEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHH----cCC--CeEEEeCCCceECCCCCCCCcc
Confidence 2 2 999999998753332222 4566899999999999998875 233 7999966655444321111122
Q ss_pred ccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 186 KSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 186 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
.+. . ...+...|+.+|.+.+.+++..+. ..|+.+..+.|+.+-
T Consensus 131 E~~-~-----~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vy 173 (314)
T COG0451 131 EDL-G-----PPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVY 173 (314)
T ss_pred ccc-C-----CCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeee
Confidence 221 1 111333799999999999999888 336899999999777
No 258
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.20 E-value=4.1e-10 Score=109.11 Aligned_cols=177 Identities=7% Similarity=-0.086 Sum_probs=114.4
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhc-CcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH-
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQS-SKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS- 98 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~-g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~- 98 (292)
.++++++ ||||+ +-||..+ +.+|..+ |+.|++ |+...... + .+..++.++.+|++|..+
T Consensus 313 ~~~~~VL-VTGat------GFIGs~L---v~~Ll~~~g~~V~~l~r~~~~~~~----~---~~~~~~~~~~gDl~d~~~~ 375 (660)
T PRK08125 313 KRRTRVL-ILGVN------GFIGNHL---TERLLRDDNYEVYGLDIGSDAISR----F---LGHPRFHFVEGDISIHSEW 375 (660)
T ss_pred hcCCEEE-EECCC------chHHHHH---HHHHHhCCCcEEEEEeCCchhhhh----h---cCCCceEEEeccccCcHHH
Confidence 4577888 99999 8899999 6666654 566664 54432211 1 112368889999998654
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
+++++ ..+|+|||+|+...+... .++-+..+++|+.++..+++++... + .++|++||...+...
T Consensus 376 l~~~l-------~~~D~ViHlAa~~~~~~~--~~~~~~~~~~Nv~~t~~ll~a~~~~-----~--~~~V~~SS~~vyg~~ 439 (660)
T PRK08125 376 IEYHI-------KKCDVVLPLVAIATPIEY--TRNPLRVFELDFEENLKIIRYCVKY-----N--KRIIFPSTSEVYGMC 439 (660)
T ss_pred HHHHh-------cCCCEEEECccccCchhh--ccCHHHHHHhhHHHHHHHHHHHHhc-----C--CeEEEEcchhhcCCC
Confidence 33332 258999999998653221 2233567899999999988887632 2 589999997554321
Q ss_pred CCCCCCCccccCcCCCCCC-hhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 179 ITKDTISKSVLSVENYSDF-WAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
....++.+.... ..... .+...|+.||.+.+.+++.+++++ |+++..+.|+.+-
T Consensus 440 -~~~~~~E~~~~~-~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vy 494 (660)
T PRK08125 440 -TDKYFDEDTSNL-IVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWM 494 (660)
T ss_pred -CCCCcCcccccc-ccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceee
Confidence 111111111100 00000 134579999999999999887664 5889999999887
No 259
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.18 E-value=5.5e-10 Score=97.22 Aligned_cols=150 Identities=17% Similarity=0.135 Sum_probs=104.0
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
++ ||||+ +.||..+ +.+|.+.|+.|++-+.. .+|+.+.++++++++..
T Consensus 2 il-v~G~t------G~iG~~l---~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~- 49 (287)
T TIGR01214 2 IL-ITGAN------GQLGREL---VQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI- 49 (287)
T ss_pred EE-EEcCC------CHHHHHH---HHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-
Confidence 45 99999 9999999 55566778877652210 47999999988887653
Q ss_pred HhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCcc
Q psy4251 108 KKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKS 187 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~ 187 (292)
++|+|||+||..... ......+..+++|+.++..+++++.. . + .++|++||...+.+. ....++.+
T Consensus 50 ----~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~--~~~v~~Ss~~vy~~~-~~~~~~E~ 115 (287)
T TIGR01214 50 ----RPDAVVNTAAYTDVD--GAESDPEKAFAVNALAPQNLARAAAR----H-G--ARLVHISTDYVFDGE-GKRPYRED 115 (287)
T ss_pred ----CCCEEEECCcccccc--ccccCHHHHHHHHHHHHHHHHHHHHH----c-C--CeEEEEeeeeeecCC-CCCCCCCC
Confidence 589999999975321 12234567889999999999888643 2 3 589999997544221 11111111
Q ss_pred ccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 188 VLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 188 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
. ..++...|+.+|...+.+++.+ +..+..+.|+.+-
T Consensus 116 ~-------~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~ 151 (287)
T TIGR01214 116 D-------ATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLY 151 (287)
T ss_pred C-------CCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecc
Confidence 1 1224668999999999888764 3568899999887
No 260
>KOG1371|consensus
Probab=99.17 E-value=7.3e-10 Score=94.79 Aligned_cols=168 Identities=12% Similarity=0.047 Sum_probs=116.9
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEc-C-HHHHHHHHHHHHhhCC-CCceEEEEccCCChHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQN-C-WDKANDAISKILTEKP-SAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r-~-~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~ 101 (292)
+++++ ||||+ +=||..+ +++|...|..|++- | ..........+++..+ +..+.+++.|++|.+.+++
T Consensus 2 ~~~VL-VtGga------GyiGsht---~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~k 71 (343)
T KOG1371|consen 2 GKHVL-VTGGA------GYIGSHT---VLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEK 71 (343)
T ss_pred CcEEE-EecCC------cceehHH---HHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHH
Confidence 56788 99999 7788888 89999999888752 2 1111222222322221 4689999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
++++. ++|.|+|-|+...-.. +.+.-......|+.|+..+++.... .+. ..+|+.||.+.+..+..
T Consensus 72 vF~~~-----~fd~V~Hfa~~~~vge--S~~~p~~Y~~nNi~gtlnlLe~~~~----~~~--~~~V~sssatvYG~p~~- 137 (343)
T KOG1371|consen 72 LFSEV-----KFDAVMHFAALAAVGE--SMENPLSYYHNNIAGTLNLLEVMKA----HNV--KALVFSSSATVYGLPTK- 137 (343)
T ss_pred HHhhc-----CCceEEeehhhhccch--hhhCchhheehhhhhHHHHHHHHHH----cCC--ceEEEecceeeecCcce-
Confidence 98887 4999999999764222 2223367888999999998887543 334 79999999866543311
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY 222 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~ 222 (292)
+.+ +|+.....+...|+.+|.+++.....+.+.+.
T Consensus 138 --ip~----te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 138 --VPI----TEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred --eec----cCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence 111 11112224788999999999999998887765
No 261
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=99.17 E-value=1.5e-09 Score=93.45 Aligned_cols=178 Identities=11% Similarity=0.051 Sum_probs=133.2
Q ss_pred EEEEcCC-CCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 28 AILCTGD-MEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 28 ~vlItGa-~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
||||-|. + .-|++.+ +..|-++|++|++ .+.+..+...+ +. ...+..+..|..++.++...++
T Consensus 5 vVvI~Gs~~------~PltR~l---a~DLeRRGFIV~v~~~~~ed~~~ve~----e~-~~dI~~L~ld~~~~~~~~~~l~ 70 (299)
T PF08643_consen 5 VVVIAGSPH------DPLTRSL---ALDLERRGFIVYVTVSSAEDEKYVES----ED-RPDIRPLWLDDSDPSSIHASLS 70 (299)
T ss_pred EEEEECCCC------CccHHHH---HHHHhhCCeEEEEEeCCHHHHHHHHh----cc-CCCCCCcccCCCCCcchHHHHH
Confidence 4447785 6 9999999 9999999999986 44433332222 21 3457888889888888777777
Q ss_pred HHHHhCC--------------CccEEEEccccc---CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEE
Q psy4251 105 EYQKKFR--------------SLNILVLNAGVF---GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVV 167 (292)
Q Consensus 105 ~~~~~~~--------------~id~lI~nAg~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV 167 (292)
++.+... .+..||...... +|...++.+.|..+++.|++.++.+++.++|+|..+..++.+||
T Consensus 71 ~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~ii 150 (299)
T PF08643_consen 71 RFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKII 150 (299)
T ss_pred HHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 7765543 356666655543 35568899999999999999999999999999987331116666
Q ss_pred EEc-CcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-c
Q psy4251 168 VVS-SESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-T 238 (292)
Q Consensus 168 ~vs-S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~ 238 (292)
.++ |..+.... + ....-.....++..|+..|.+|+.+.+|.|..++-|.++ .
T Consensus 151 l~~Psi~ssl~~------------P-------fhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 151 LFNPSISSSLNP------------P-------FHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG 204 (299)
T ss_pred EEeCchhhccCC------------C-------ccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence 665 55455443 2 456678888899999999999999999999999999999 5
No 262
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.17 E-value=3.6e-10 Score=99.20 Aligned_cols=159 Identities=12% Similarity=-0.001 Sum_probs=105.5
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE-cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ-NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQK 108 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~ 108 (292)
|||||+ +-||..+ +..|...|..++. ++. ..+|+++.++++++++..
T Consensus 1 lItGa~------GfiG~~l---~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~-- 48 (306)
T PLN02725 1 FVAGHR------GLVGSAI---VRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKE-- 48 (306)
T ss_pred CcccCC------CcccHHH---HHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhcc--
Confidence 499999 9999999 5556667765543 211 248999999888876663
Q ss_pred hCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCccc
Q psy4251 109 KFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSV 188 (292)
Q Consensus 109 ~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~~ 188 (292)
++|+|||+|+....... ..+.-+..+++|+.++..+++.+... +. .++|++||...+.+. .....+.++
T Consensus 49 ---~~d~Vih~A~~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~~~~~----~~--~~~i~~SS~~vyg~~-~~~~~~E~~ 117 (306)
T PLN02725 49 ---KPTYVILAAAKVGGIHA-NMTYPADFIRENLQIQTNVIDAAYRH----GV--KKLLFLGSSCIYPKF-APQPIPETA 117 (306)
T ss_pred ---CCCEEEEeeeeecccch-hhhCcHHHHHHHhHHHHHHHHHHHHc----CC--CeEEEeCceeecCCC-CCCCCCHHH
Confidence 58999999997532111 11223567889999988888887532 33 699999997544321 111111111
Q ss_pred cCcCCCCCChh-hhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 189 LSVENYSDFWA-MTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 189 ~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
+.. ....+ ...|+.||.+.+.+++.+.++. ++++..+.|+.+-
T Consensus 118 ~~~---~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vy 161 (306)
T PLN02725 118 LLT---GPPEPTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLY 161 (306)
T ss_pred hcc---CCCCCCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccee
Confidence 100 01112 2359999999999888877665 5889999999887
No 263
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.16 E-value=7.9e-10 Score=99.92 Aligned_cols=178 Identities=11% Similarity=-0.052 Sum_probs=113.6
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
-++++++ ||||+ +-||..+ +..|.+.|+.|++ |.... .+... .....++.+|+++.+.+.
T Consensus 19 ~~~~~Il-VtGgt------GfIG~~l---~~~L~~~G~~V~~v~r~~~~------~~~~~--~~~~~~~~~Dl~d~~~~~ 80 (370)
T PLN02695 19 SEKLRIC-ITGAG------GFIASHI---ARRLKAEGHYIIASDWKKNE------HMSED--MFCHEFHLVDLRVMENCL 80 (370)
T ss_pred CCCCEEE-EECCc------cHHHHHH---HHHHHhCCCEEEEEEecccc------ccccc--cccceEEECCCCCHHHHH
Confidence 3677888 99999 9999999 6666677877765 33211 01111 113567889999987766
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
.+++ .+|+|||+|+....... ...+....+..|+.++.++++++.. .+. .++|++||...+.....
T Consensus 81 ~~~~-------~~D~Vih~Aa~~~~~~~-~~~~~~~~~~~N~~~t~nll~aa~~----~~v--k~~V~~SS~~vYg~~~~ 146 (370)
T PLN02695 81 KVTK-------GVDHVFNLAADMGGMGF-IQSNHSVIMYNNTMISFNMLEAARI----NGV--KRFFYASSACIYPEFKQ 146 (370)
T ss_pred HHHh-------CCCEEEEcccccCCccc-cccCchhhHHHHHHHHHHHHHHHHH----hCC--CEEEEeCchhhcCCccc
Confidence 5542 47999999986532111 1122345577899999888887642 233 69999999765432211
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
..... .+..+......+...|+.+|.+.+.+++.+++.+ |+++..+.|+.+-
T Consensus 147 -~~~~~-~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vy 198 (370)
T PLN02695 147 -LETNV-SLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF---GIECRIGRFHNIY 198 (370)
T ss_pred -cCcCC-CcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEECCcc
Confidence 00000 0000000122356789999999999999887654 6899999999888
No 264
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.16 E-value=6.6e-10 Score=94.74 Aligned_cols=137 Identities=17% Similarity=0.071 Sum_probs=100.8
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
++ |||++ +-+|.++ +..+. .+..|+.-+. -.+|++|.+.+.+++++.
T Consensus 3 iL-i~G~~------GqLG~~L---~~~l~-~~~~v~a~~~---------------------~~~Ditd~~~v~~~i~~~- 49 (281)
T COG1091 3 IL-ITGAN------GQLGTEL---RRALP-GEFEVIATDR---------------------AELDITDPDAVLEVIRET- 49 (281)
T ss_pred EE-EEcCC------ChHHHHH---HHHhC-CCceEEeccC---------------------ccccccChHHHHHHHHhh-
Confidence 45 99999 9999999 55454 5456654211 018999999999998887
Q ss_pred HhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCcc
Q psy4251 108 KKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKS 187 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~ 187 (292)
++|+|||+|++.. .+..+.+-+..+.+|..|+.++.++.... + .++|++|+.-.+.+.... ....+
T Consensus 50 ----~PDvVIn~AAyt~--vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-----g--a~lVhiSTDyVFDG~~~~-~Y~E~ 115 (281)
T COG1091 50 ----RPDVVINAAAYTA--VDKAESEPELAFAVNATGAENLARAAAEV-----G--ARLVHISTDYVFDGEKGG-PYKET 115 (281)
T ss_pred ----CCCEEEECccccc--cccccCCHHHHHHhHHHHHHHHHHHHHHh-----C--CeEEEeecceEecCCCCC-CCCCC
Confidence 6999999999874 23344556899999999999999987543 2 799999998665554211 12222
Q ss_pred ccCcCCCCCChhhhHHHHhHHHHHHHHHHHH
Q psy4251 188 VLSVENYSDFWAMTAYNDTKLCNVLFGEKLA 218 (292)
Q Consensus 188 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la 218 (292)
+. -++...||.||.+.+..+++..
T Consensus 116 D~-------~~P~nvYG~sKl~GE~~v~~~~ 139 (281)
T COG1091 116 DT-------PNPLNVYGRSKLAGEEAVRAAG 139 (281)
T ss_pred CC-------CCChhhhhHHHHHHHHHHHHhC
Confidence 22 2378899999999999888764
No 265
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.14 E-value=4.6e-10 Score=95.88 Aligned_cols=177 Identities=12% Similarity=0.031 Sum_probs=92.5
Q ss_pred EcCCCCCCCCcccchhhHHHHHHHHhhcCc--EEE--EcCH--HH-HHHHHHHHHhhC--------CCCceEEEEccCCC
Q psy4251 31 CTGDMEFYPRYTGLKKKDGNLCFDLVQSSK--LFY--QNCW--DK-ANDAISKILTEK--------PSAQCIAMELDLCR 95 (292)
Q Consensus 31 ItGa~~~~~~~~GiG~~~a~~~~~l~~~g~--~v~--~r~~--~~-~~~~~~~l~~~~--------~~~~~~~~~~Dls~ 95 (292)
||||| +=||..+ +.+|...+. .|+ +|.. .. .+...+.+.+.. ...++.++.+|+++
T Consensus 1 lTGaT------GflG~~l---l~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~ 71 (249)
T PF07993_consen 1 LTGAT------GFLGSHL---LEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQ 71 (249)
T ss_dssp EE-TT------SHHHHHH---HHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTS
T ss_pred CcCCC------cHHHHHH---HHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccc
Confidence 79999 7777777 666666654 555 4653 12 222222221110 04699999999998
Q ss_pred hHH--HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 96 LKS--VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 96 ~~~--v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
+.- -.+-.+++.+ .+|+|||||+...-.. .++...++|+.|+..+++.+. .... .++++||| +
T Consensus 72 ~~lGL~~~~~~~L~~---~v~~IiH~Aa~v~~~~-----~~~~~~~~NV~gt~~ll~la~----~~~~--~~~~~iST-a 136 (249)
T PF07993_consen 72 PNLGLSDEDYQELAE---EVDVIIHCAASVNFNA-----PYSELRAVNVDGTRNLLRLAA----QGKR--KRFHYIST-A 136 (249)
T ss_dssp GGGG--HHHHHHHHH---H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHT----SSS-----EEEEEE-G
T ss_pred cccCCChHHhhcccc---ccceeeecchhhhhcc-----cchhhhhhHHHHHHHHHHHHH----hccC--cceEEecc-c
Confidence 641 1222333433 4899999999764211 345578899999999888765 2233 59999999 3
Q ss_pred cccccCCCCCCC-----ccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 174 HRYSYITKDTIS-----KSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 174 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
...+... .... .+.... .........|..||...+.+.+..+++. |+.+..+.||.|-
T Consensus 137 ~v~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~ 199 (249)
T PF07993_consen 137 YVAGSRP-GTIEEKVYPEEEDDL--DPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIV 199 (249)
T ss_dssp GGTTS-T-TT--SSS-HHH--EE--E--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE
T ss_pred cccCCCC-Ccccccccccccccc--hhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCccc
Confidence 2222211 1110 000000 0111234589999999999999888763 5889999999988
No 266
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.14 E-value=1.2e-09 Score=95.92 Aligned_cols=141 Identities=12% Similarity=-0.025 Sum_probs=94.5
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ +=||..+ +..|.+.| .|++ |.. ..+..|++|.+.+.++++
T Consensus 2 ~iL-VtG~~------GfiGs~l---~~~L~~~g-~V~~~~~~~-------------------~~~~~Dl~d~~~~~~~~~ 51 (299)
T PRK09987 2 NIL-LFGKT------GQVGWEL---QRALAPLG-NLIALDVHS-------------------TDYCGDFSNPEGVAETVR 51 (299)
T ss_pred eEE-EECCC------CHHHHHH---HHHhhccC-CEEEecccc-------------------ccccCCCCCHHHHHHHHH
Confidence 466 99999 8899998 55566666 3443 221 124579999999888776
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTI 184 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~ 184 (292)
.. ++|+|||+|+...... ..++-+..+.+|+.++..+++++... + .++|++||...+.+. ....+
T Consensus 52 ~~-----~~D~Vih~Aa~~~~~~--~~~~~~~~~~~N~~~~~~l~~aa~~~-----g--~~~v~~Ss~~Vy~~~-~~~p~ 116 (299)
T PRK09987 52 KI-----RPDVIVNAAAHTAVDK--AESEPEFAQLLNATSVEAIAKAANEV-----G--AWVVHYSTDYVFPGT-GDIPW 116 (299)
T ss_pred hc-----CCCEEEECCccCCcch--hhcCHHHHHHHHHHHHHHHHHHHHHc-----C--CeEEEEccceEECCC-CCCCc
Confidence 53 5899999999764321 22333567789999999998877532 2 689999997654322 11111
Q ss_pred CccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHh
Q psy4251 185 SKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLAT 219 (292)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~ 219 (292)
..+ ....+...|+.||.+.+.+++.+..
T Consensus 117 ~E~-------~~~~P~~~Yg~sK~~~E~~~~~~~~ 144 (299)
T PRK09987 117 QET-------DATAPLNVYGETKLAGEKALQEHCA 144 (299)
T ss_pred CCC-------CCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 111 1223667899999999998876543
No 267
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.07 E-value=2.5e-09 Score=98.63 Aligned_cols=173 Identities=8% Similarity=-0.011 Sum_probs=110.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHH-HHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWD-KANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
++++++ ||||+ +-||..+ +.+|.++|..|++ |... ..+.... .....++.++..|+.+...
T Consensus 118 ~~~kIL-VTGat------GfIGs~L---v~~Ll~~G~~V~~ld~~~~~~~~~~~~----~~~~~~~~~i~~D~~~~~l-- 181 (442)
T PLN02206 118 KGLRVV-VTGGA------GFVGSHL---VDRLMARGDSVIVVDNFFTGRKENVMH----HFSNPNFELIRHDVVEPIL-- 181 (442)
T ss_pred CCCEEE-EECcc------cHHHHHH---HHHHHHCcCEEEEEeCCCccchhhhhh----hccCCceEEEECCccChhh--
Confidence 567888 99999 8888888 6667788888775 3211 1111111 1123467888999876521
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
..+|+|||+|+...+.. ..++-+..+++|+.++..+++++... + .++|++||...+.....
T Consensus 182 ----------~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~~-----g--~r~V~~SS~~VYg~~~~ 242 (442)
T PLN02206 182 ----------LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV-----G--ARFLLTSTSEVYGDPLQ 242 (442)
T ss_pred ----------cCCCEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHHh-----C--CEEEEECChHHhCCCCC
Confidence 24899999998764322 12234678999999999999887532 2 68999999865532211
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
. ....+.+.. .....+...|+.+|.+.+.+++.+.+.. ++.+..+.|+.+-
T Consensus 243 ~-p~~E~~~~~--~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vy 293 (442)
T PLN02206 243 H-PQVETYWGN--VNPIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTY 293 (442)
T ss_pred C-CCCcccccc--CCCCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEecccc
Confidence 0 011110000 0111235689999999999988876654 5778888777665
No 268
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.01 E-value=5.2e-09 Score=101.61 Aligned_cols=172 Identities=12% Similarity=-0.002 Sum_probs=106.7
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHh--hcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH--H
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLV--QSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV--K 100 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~--~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v--~ 100 (292)
+++ ||||+ +-||..+ +.+|. ..|..|+ .|+... ...+++.......++.++.+|+++++.. .
T Consensus 2 ~IL-VTGat------GfIG~~l---v~~Ll~~~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~ 69 (657)
T PRK07201 2 RYF-VTGGT------GFIGRRL---VSRLLDRRREATVHVLVRRQSL--SRLEALAAYWGADRVVPLVGDLTEPGLGLSE 69 (657)
T ss_pred eEE-EeCCc------cHHHHHH---HHHHHhcCCCCEEEEEECcchH--HHHHHHHHhcCCCcEEEEecccCCccCCcCH
Confidence 466 99999 9999999 55555 4666665 464322 1122222222224789999999985321 1
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
...+++ ..+|+|||+||..... ...+...++|+.++..+++++. +.+. .++|++||.........
T Consensus 70 ~~~~~l----~~~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~----~~~~--~~~v~~SS~~v~g~~~~ 134 (657)
T PRK07201 70 ADIAEL----GDIDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAE----RLQA--ATFHHVSSIAVAGDYEG 134 (657)
T ss_pred HHHHHh----cCCCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHH----hcCC--CeEEEEeccccccCccC
Confidence 122222 4699999999975321 2235677899999888877754 3334 79999999765432210
Q ss_pred CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
..+.+.... .......|+.+|...+.+.+. ..|+.+..+.|+.|-
T Consensus 135 --~~~e~~~~~----~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~ 179 (657)
T PRK07201 135 --VFREDDFDE----GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVV 179 (657)
T ss_pred --ccccccchh----hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeee
Confidence 111111100 011235699999999988753 237899999999887
No 269
>PLN02996 fatty acyl-CoA reductase
Probab=99.00 E-value=6.2e-09 Score=97.29 Aligned_cols=191 Identities=13% Similarity=0.038 Sum_probs=111.0
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEE--EEcCH------HHHH-HH-----HHHHHhhCC------
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLF--YQNCW------DKAN-DA-----ISKILTEKP------ 82 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v--~~r~~------~~~~-~~-----~~~l~~~~~------ 82 (292)
++||+++ ||||| +=||..+++.+++....-..| ++|.. ++++ +. .+.+++..+
T Consensus 9 ~~~k~Vl-vTGaT------GFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~ 81 (491)
T PLN02996 9 LENKTIL-VTGAT------GFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSL 81 (491)
T ss_pred hCCCeEE-EeCCC------cHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhh
Confidence 6789999 99999 889999844433321121223 34542 1221 11 111122211
Q ss_pred -CCceEEEEccCCChH----HHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHH
Q psy4251 83 -SAQCIAMELDLCRLK----SVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALI 157 (292)
Q Consensus 83 -~~~~~~~~~Dls~~~----~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~ 157 (292)
..++.++.+|++++. + ....+++.+ .+|+|||+|+.... .+..+..+++|+.|+..+++++...
T Consensus 82 ~~~kv~~i~GDl~~~~LGLs~-~~~~~~l~~---~vD~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~-- 150 (491)
T PLN02996 82 ISEKVTPVPGDISYDDLGVKD-SNLREEMWK---EIDIVVNLAATTNF-----DERYDVALGINTLGALNVLNFAKKC-- 150 (491)
T ss_pred hhcCEEEEecccCCcCCCCCh-HHHHHHHHh---CCCEEEECccccCC-----cCCHHHHHHHHHHHHHHHHHHHHhc--
Confidence 157999999998432 1 112222222 48999999997642 1346788999999999998877532
Q ss_pred hcCCCCcEEEEEcCcccccccCCC--CC-CC------------cc-----------c-----cCc------------CCC
Q psy4251 158 KGAKLFARVVVVSSESHRYSYITK--DT-IS------------KS-----------V-----LSV------------ENY 194 (292)
Q Consensus 158 ~~~~~~~~iV~vsS~~~~~~~~~~--~~-~~------------~~-----------~-----~~~------------~~~ 194 (292)
... .++|++||.......... +. +. .+ + ... +..
T Consensus 151 -~~~--k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (491)
T PLN02996 151 -VKV--KMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERA 227 (491)
T ss_pred -CCC--CeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHH
Confidence 122 689999997655332110 00 00 00 0 000 000
Q ss_pred CCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 195 SDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 195 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
........|+.||++.+.+++..+. ++.+..+.|+.|- +.
T Consensus 228 ~~~~~pn~Y~~TK~~aE~lv~~~~~-----~lpv~i~RP~~V~G~~ 268 (491)
T PLN02996 228 KLHGWPNTYVFTKAMGEMLLGNFKE-----NLPLVIIRPTMITSTY 268 (491)
T ss_pred HhCCCCCchHhhHHHHHHHHHHhcC-----CCCEEEECCCEeccCC
Confidence 0011224699999999999976532 6899999999997 54
No 270
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.00 E-value=1.1e-08 Score=94.19 Aligned_cols=173 Identities=8% Similarity=-0.022 Sum_probs=109.2
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
.++++ ||||+ +=||..+ +.+|.+.|+.|++ |......+....+ ....++.++..|+.+..
T Consensus 120 ~mkIL-VTGat------GFIGs~L---v~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~----- 181 (436)
T PLN02166 120 RLRIV-VTGGA------GFVGSHL---VDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI----- 181 (436)
T ss_pred CCEEE-EECCc------cHHHHHH---HHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc-----
Confidence 45677 99999 8888888 7777788888775 3211111111111 11236778888986542
Q ss_pred HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD 182 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~ 182 (292)
+ ..+|+|||+|+...+... ..+-+..+++|+.++..+++++... + .++|++||...+..... .
T Consensus 182 ---~----~~~D~ViHlAa~~~~~~~--~~~p~~~~~~Nv~gT~nLleaa~~~-----g--~r~V~~SS~~VYg~~~~-~ 244 (436)
T PLN02166 182 ---L----LEVDQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLAKRV-----G--ARFLLTSTSEVYGDPLE-H 244 (436)
T ss_pred ---c----cCCCEEEECceeccchhh--ccCHHHHHHHHHHHHHHHHHHHHHh-----C--CEEEEECcHHHhCCCCC-C
Confidence 1 258999999987543221 1234678999999999998887532 2 68999999765532211 0
Q ss_pred CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
..+.+.+.. .....+...|+.+|.+.+.+++.+++.. ++.+..+.|+.+-
T Consensus 245 p~~E~~~~~--~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vY 294 (436)
T PLN02166 245 PQKETYWGN--VNPIGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTY 294 (436)
T ss_pred CCCcccccc--CCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEcccc
Confidence 011111000 0112235679999999999999887653 5778888887666
No 271
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.00 E-value=1.9e-09 Score=93.91 Aligned_cols=151 Identities=15% Similarity=0.089 Sum_probs=95.9
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEY 106 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~ 106 (292)
+++ |||++ +=||.++ +..+...|+.++.-+.. .+|++|.+++.+++++.
T Consensus 2 riL-I~Gas------G~lG~~l---~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~ 50 (286)
T PF04321_consen 2 RIL-ITGAS------GFLGSAL---ARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF 50 (286)
T ss_dssp EEE-EETTT------SHHHHHH---HHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH
T ss_pred EEE-EECCC------CHHHHHH---HHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh
Confidence 466 99999 9999999 77777788777752211 78999999999998887
Q ss_pred HHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCc
Q psy4251 107 QKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISK 186 (292)
Q Consensus 107 ~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~ 186 (292)
++|+|||+||+..+ +...++-+..+.+|+.++..+.+.+.. .+ .++|++||...+.+..... ...
T Consensus 51 -----~pd~Vin~aa~~~~--~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~--~~li~~STd~VFdG~~~~~-y~E 115 (286)
T PF04321_consen 51 -----KPDVVINCAAYTNV--DACEKNPEEAYAINVDATKNLAEACKE-----RG--ARLIHISTDYVFDGDKGGP-YTE 115 (286)
T ss_dssp -------SEEEE------H--HHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT---EEEEEEEGGGS-SSTSSS-B-T
T ss_pred -----CCCeEeccceeecH--HhhhhChhhhHHHhhHHHHHHHHHHHH-----cC--CcEEEeeccEEEcCCcccc-ccc
Confidence 58999999998632 112334577899999999999988753 23 7999999986665431111 122
Q ss_pred cccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 187 SVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 187 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
++ ..++.+.||.+|...+...+... + ....+.+|++-
T Consensus 116 ~d-------~~~P~~~YG~~K~~~E~~v~~~~---~----~~~IlR~~~~~ 152 (286)
T PF04321_consen 116 DD-------PPNPLNVYGRSKLEGEQAVRAAC---P----NALILRTSWVY 152 (286)
T ss_dssp TS-----------SSHHHHHHHHHHHHHHHH----S----SEEEEEE-SEE
T ss_pred CC-------CCCCCCHHHHHHHHHHHHHHHhc---C----CEEEEecceec
Confidence 22 22367899999999998777622 2 24455555555
No 272
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.95 E-value=3.2e-08 Score=86.76 Aligned_cols=186 Identities=12% Similarity=0.021 Sum_probs=110.5
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC-cEEEE--c--CH----HHHHHHHHHHH--hhCCCCceEEEEccCC
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS-KLFYQ--N--CW----DKANDAISKIL--TEKPSAQCIAMELDLC 94 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g-~~v~~--r--~~----~~~~~~~~~l~--~~~~~~~~~~~~~Dls 94 (292)
++++ +|||| |+-.+..+.+|..+- ..|++ | |. +++++...... ++....++..+..|++
T Consensus 1 ~~vl-LTGAT---------GFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~ 70 (382)
T COG3320 1 RNVL-LTGAT---------GFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLA 70 (382)
T ss_pred CeEE-EecCc---------hHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccc
Confidence 3567 99999 555544477776653 34543 3 32 22333322110 1222579999999999
Q ss_pred ChHH--HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcE-EEEEcC
Q psy4251 95 RLKS--VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFAR-VVVVSS 171 (292)
Q Consensus 95 ~~~~--v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~-iV~vsS 171 (292)
.+.- -+.-.+++. ..+|.+||||+..+- .....+....|++|+..+++.... .+ ++ +.+|||
T Consensus 71 e~~lGL~~~~~~~La---~~vD~I~H~gA~Vn~-----v~pYs~L~~~NVlGT~evlrLa~~-----gk--~Kp~~yVSs 135 (382)
T COG3320 71 EPDLGLSERTWQELA---ENVDLIIHNAALVNH-----VFPYSELRGANVLGTAEVLRLAAT-----GK--PKPLHYVSS 135 (382)
T ss_pred cccCCCCHHHHHHHh---hhcceEEecchhhcc-----cCcHHHhcCcchHhHHHHHHHHhc-----CC--CceeEEEee
Confidence 4321 122223332 358999999997642 123466778899999998887642 22 44 889999
Q ss_pred cccccccCCC-CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-ccc
Q psy4251 172 ESHRYSYITK-DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVS 240 (292)
Q Consensus 172 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~ 240 (292)
++........ .+..++...+.....-.....|+.||.+.+.+++..... |+++..+.||+|- +-.
T Consensus 136 isv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~ 202 (382)
T COG3320 136 ISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSR 202 (382)
T ss_pred eeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCc
Confidence 8654332211 111122111100111224578999999999988876644 7999999999998 444
No 273
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.91 E-value=3.1e-08 Score=87.64 Aligned_cols=145 Identities=10% Similarity=-0.053 Sum_probs=97.4
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||| +-||..+ +.+|.++|+.|. +|+.++.. .+.. ..+.++.+|++|++++.++++
T Consensus 2 kIl-VtGat------G~iG~~l---v~~Ll~~g~~V~~l~R~~~~~~----~l~~----~~v~~v~~Dl~d~~~l~~al~ 63 (317)
T CHL00194 2 SLL-VIGAT------GTLGRQI---VRQALDEGYQVRCLVRNLRKAS----FLKE----WGAELVYGDLSLPETLPPSFK 63 (317)
T ss_pred EEE-EECCC------cHHHHHH---HHHHHHCCCeEEEEEcChHHhh----hHhh----cCCEEEECCCCCHHHHHHHHC
Confidence 466 99999 9999999 556667787765 47765432 1221 257889999999988766543
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTI 184 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~ 184 (292)
.+|+|||+++... .+.....++|+.++.++++++.. .+. .|+|++||..+.. .
T Consensus 64 -------g~d~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~----~gv--kr~I~~Ss~~~~~-~------ 116 (317)
T CHL00194 64 -------GVTAIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKA----AKI--KRFIFFSILNAEQ-Y------ 116 (317)
T ss_pred -------CCCEEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHH----cCC--CEEEEeccccccc-c------
Confidence 4799999876421 12234567888888877776643 333 6999999853321 1
Q ss_pred CccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 185 SKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
+...|..+|...+.+.+ ..|+....+.|+.+-
T Consensus 117 --------------~~~~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~ 148 (317)
T CHL00194 117 --------------PYIPLMKLKSDIEQKLK-------KSGIPYTIFRLAGFF 148 (317)
T ss_pred --------------CCChHHHHHHHHHHHHH-------HcCCCeEEEeecHHh
Confidence 22346778877665543 236888889998665
No 274
>PLN02778 3,5-epimerase/4-reductase
Probab=98.86 E-value=6.6e-08 Score=84.83 Aligned_cols=142 Identities=11% Similarity=-0.101 Sum_probs=88.4
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
++++ ||||+ +=||..+ +..|.++|+.|+. ...|+.+.+.+...++.
T Consensus 10 ~kiL-VtG~t------GfiG~~l---~~~L~~~g~~V~~------------------------~~~~~~~~~~v~~~l~~ 55 (298)
T PLN02778 10 LKFL-IYGKT------GWIGGLL---GKLCQEQGIDFHY------------------------GSGRLENRASLEADIDA 55 (298)
T ss_pred CeEE-EECCC------CHHHHHH---HHHHHhCCCEEEE------------------------ecCccCCHHHHHHHHHh
Confidence 5677 99999 8899999 6667677776653 12455666665555443
Q ss_pred HHHhCCCccEEEEcccccCCCC-CCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC--CC-
Q psy4251 106 YQKKFRSLNILVLNAGVFGLGF-SHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI--TK- 181 (292)
Q Consensus 106 ~~~~~~~id~lI~nAg~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~--~~- 181 (292)
. ++|+|||+||...... +...++-...+++|+.++..+++++... + .+.+++||...+.... +.
T Consensus 56 ~-----~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g---v~~v~~sS~~vy~~~~~~p~~ 123 (298)
T PLN02778 56 V-----KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER----G---LVLTNYATGCIFEYDDAHPLG 123 (298)
T ss_pred c-----CCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----C---CCEEEEecceEeCCCCCCCcc
Confidence 2 5899999999865321 1223345678999999999999987542 2 3455565543221110 00
Q ss_pred -C-CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHh
Q psy4251 182 -D-TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLAT 219 (292)
Q Consensus 182 -~-~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~ 219 (292)
. .+..++. ..++...|+.||.+.+.+++.++.
T Consensus 124 ~~~~~~Ee~~------p~~~~s~Yg~sK~~~E~~~~~y~~ 157 (298)
T PLN02778 124 SGIGFKEEDT------PNFTGSFYSKTKAMVEELLKNYEN 157 (298)
T ss_pred cCCCCCcCCC------CCCCCCchHHHHHHHHHHHHHhhc
Confidence 0 0111111 111346799999999999987653
No 275
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.83 E-value=1.4e-07 Score=76.40 Aligned_cols=146 Identities=16% Similarity=0.034 Sum_probs=99.2
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
+|+||| +.+|+.+ +.+|.++|+.|. +|+.++.++ ..++..+++|+.|++++.+.++
T Consensus 2 ~V~Gat------G~vG~~l---~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~--- 59 (183)
T PF13460_consen 2 LVFGAT------GFVGRAL---AKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK--- 59 (183)
T ss_dssp EEETTT------SHHHHHH---HHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT---
T ss_pred EEECCC------ChHHHHH---HHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh---
Confidence 499999 9999999 666777777765 588776655 3489999999999977776644
Q ss_pred HhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCcc
Q psy4251 108 KKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKS 187 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~ 187 (292)
..|++|+++|.... + ...++.++..+++.+. .++|++|+......... ...+
T Consensus 60 ----~~d~vi~~~~~~~~-------~------------~~~~~~~~~a~~~~~~--~~~v~~s~~~~~~~~~~---~~~~ 111 (183)
T PF13460_consen 60 ----GADAVIHAAGPPPK-------D------------VDAAKNIIEAAKKAGV--KRVVYLSSAGVYRDPPG---LFSD 111 (183)
T ss_dssp ----TSSEEEECCHSTTT-------H------------HHHHHHHHHHHHHTTS--SEEEEEEETTGTTTCTS---EEEG
T ss_pred ----hcchhhhhhhhhcc-------c------------cccccccccccccccc--ccceeeeccccCCCCCc---cccc
Confidence 58999999975422 0 4455666666766665 79999999765543210 0000
Q ss_pred ccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cc
Q psy4251 188 VLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TV 239 (292)
Q Consensus 188 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~ 239 (292)
...+ ....|...|...+.+.+ ..+++...+.||++. +.
T Consensus 112 ~~~~-------~~~~~~~~~~~~e~~~~-------~~~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 112 EDKP-------IFPEYARDKREAEEALR-------ESGLNWTIVRPGWIYGNP 150 (183)
T ss_dssp GTCG-------GGHHHHHHHHHHHHHHH-------HSTSEEEEEEESEEEBTT
T ss_pred cccc-------chhhhHHHHHHHHHHHH-------hcCCCEEEEECcEeEeCC
Confidence 1111 23566666665544332 237999999999988 54
No 276
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.82 E-value=1.4e-07 Score=91.92 Aligned_cols=153 Identities=9% Similarity=-0.080 Sum_probs=99.2
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
.++++ ||||+ +=||..+ +..|...|+.|. +...|++|.+.+.++++
T Consensus 380 ~mkiL-VtGa~------G~iG~~l---~~~L~~~g~~v~------------------------~~~~~l~d~~~v~~~i~ 425 (668)
T PLN02260 380 SLKFL-IYGRT------GWIGGLL---GKLCEKQGIAYE------------------------YGKGRLEDRSSLLADIR 425 (668)
T ss_pred CceEE-EECCC------chHHHHH---HHHHHhCCCeEE------------------------eeccccccHHHHHHHHH
Confidence 34677 99999 9999999 555656676552 12257888888877766
Q ss_pred HHHHhCCCccEEEEcccccCCC-CCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC--C-
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLG-FSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI--T- 180 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~--~- 180 (292)
+. ++|+|||+|+..... .+...++-+..+++|+.++..+++++... + .++|++||...+.... +
T Consensus 426 ~~-----~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g---~~~v~~Ss~~v~~~~~~~~~ 493 (668)
T PLN02260 426 NV-----KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN----G---LLMMNFATGCIFEYDAKHPE 493 (668)
T ss_pred hh-----CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----C---CeEEEEcccceecCCccccc
Confidence 54 589999999986432 22334455788999999999999988642 2 4667776643322110 0
Q ss_pred C-C-CCCcc-ccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecC
Q psy4251 181 K-D-TISKS-VLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHC 233 (292)
Q Consensus 181 ~-~-~~~~~-~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~P 233 (292)
. . .+..+ ...+ +...|+.||.+.+.+++.+.+. ..+++..+..
T Consensus 494 ~~~~p~~E~~~~~~-------~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~~ 539 (668)
T PLN02260 494 GSGIGFKEEDKPNF-------TGSFYSKTKAMVEELLREYDNV---CTLRVRMPIS 539 (668)
T ss_pred ccCCCCCcCCCCCC-------CCChhhHHHHHHHHHHHhhhhh---eEEEEEEecc
Confidence 0 0 01111 1111 3468999999999999876432 2467776663
No 277
>KOG0747|consensus
Probab=98.71 E-value=1.1e-07 Score=79.93 Aligned_cols=133 Identities=13% Similarity=-0.002 Sum_probs=95.4
Q ss_pred CCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCC
Q psy4251 83 SAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKL 162 (292)
Q Consensus 83 ~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~ 162 (292)
..+..+++.|+.+...+..++.. .+||.|||.|+...... +--+--...+.|++++..|.+..+... +-
T Consensus 56 ~p~ykfv~~di~~~~~~~~~~~~-----~~id~vihfaa~t~vd~--s~~~~~~~~~nnil~t~~Lle~~~~sg---~i- 124 (331)
T KOG0747|consen 56 SPNYKFVEGDIADADLVLYLFET-----EEIDTVIHFAAQTHVDR--SFGDSFEFTKNNILSTHVLLEAVRVSG---NI- 124 (331)
T ss_pred CCCceEeeccccchHHHHhhhcc-----CchhhhhhhHhhhhhhh--hcCchHHHhcCCchhhhhHHHHHHhcc---Ce-
Confidence 56899999999998887776443 48999999999764211 112224567889999999998876553 22
Q ss_pred CcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 163 FARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 163 ~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
.++|.||+...+.... ++...++....++.+.|+++|+|.+++.+++.+.+ |+.+..+.-+.|-
T Consensus 125 -~~fvhvSTdeVYGds~-------~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVY 188 (331)
T KOG0747|consen 125 -RRFVHVSTDEVYGDSD-------EDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVY 188 (331)
T ss_pred -eEEEEecccceecCcc-------ccccccccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCcc
Confidence 6999999987664431 11111123344577889999999999999999887 4778777777666
No 278
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.66 E-value=6.8e-07 Score=84.90 Aligned_cols=130 Identities=11% Similarity=0.122 Sum_probs=81.4
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC---cEE--EEcCH--H-HHHHHHH---------HHHhhCC---
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS---KLF--YQNCW--D-KANDAIS---------KILTEKP--- 82 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g---~~v--~~r~~--~-~~~~~~~---------~l~~~~~--- 82 (292)
++||+++ ||||| +=||+.+ +.+|+..+ ..| ++|.. + ..+...+ .+++..+
T Consensus 117 ~~~k~Vl-VTGaT------GFLGk~L---lekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~ 186 (605)
T PLN02503 117 LRGKNFL-ITGAT------GFLAKVL---IEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSY 186 (605)
T ss_pred hcCCEEE-EcCCc------hHHHHHH---HHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccc
Confidence 5789999 99999 8888888 55555432 133 34532 1 1122211 2233322
Q ss_pred ----CCceEEEEccCCChHH-H-HHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHH
Q psy4251 83 ----SAQCIAMELDLCRLKS-V-KKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENAL 156 (292)
Q Consensus 83 ----~~~~~~~~~Dls~~~~-v-~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l 156 (292)
..++..+.+|++++.- + .+..+.+.+ .+|+|||+|+.... .+..+..+++|+.|+..+++.+...
T Consensus 187 ~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~---~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~- 257 (605)
T PLN02503 187 QSFMLSKLVPVVGNVCESNLGLEPDLADEIAK---EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKC- 257 (605)
T ss_pred cccccccEEEEEeeCCCcccCCCHHHHHHHHh---cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHc-
Confidence 2479999999998730 0 112222322 48999999997631 2457889999999999999876532
Q ss_pred HhcCCCCcEEEEEcCcccc
Q psy4251 157 IKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 157 ~~~~~~~~~iV~vsS~~~~ 175 (292)
... .++|++||....
T Consensus 258 --~~l--k~fV~vSTayVy 272 (605)
T PLN02503 258 --KKL--KLFLQVSTAYVN 272 (605)
T ss_pred --CCC--CeEEEccCceee
Confidence 112 578998886544
No 279
>KOG1430|consensus
Probab=98.66 E-value=4.1e-07 Score=80.49 Aligned_cols=177 Identities=10% Similarity=-0.005 Sum_probs=111.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC--cEEEEcCHHHH-HHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS--KLFYQNCWDKA-NDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g--~~v~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
++.+++ ||||+ +=+|..+ +..|.+.+ ..|.+-|.... .....+.... ...++.++++|+.+..++.
T Consensus 3 ~~~~vl-VtGG~------GflG~hl---v~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~ 71 (361)
T KOG1430|consen 3 KKLSVL-VTGGS------GFLGQHL---VQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSIS 71 (361)
T ss_pred cCCEEE-EECCc------cHHHHHH---HHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhh
Confidence 456788 99999 5556655 66666666 44443222111 1111111111 1568999999999988877
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~ 180 (292)
+.+ ... .+||+|+... ...-..+-+..+++|+.|+.++++.+... +. .++|++||.....+..+
T Consensus 72 ~a~-------~~~-~Vvh~aa~~~--~~~~~~~~~~~~~vNV~gT~nvi~~c~~~----~v--~~lIYtSs~~Vvf~g~~ 135 (361)
T KOG1430|consen 72 NAF-------QGA-VVVHCAASPV--PDFVENDRDLAMRVNVNGTLNVIEACKEL----GV--KRLIYTSSAYVVFGGEP 135 (361)
T ss_pred hhc-------cCc-eEEEeccccC--ccccccchhhheeecchhHHHHHHHHHHh----CC--CEEEEecCceEEeCCee
Confidence 663 345 6666665432 22223356788999999988888887644 33 79999999877766533
Q ss_pred CCCCCccccCcCCCCCCh--hhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 181 KDTISKSVLSVENYSDFW--AMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
-++.++..+++ ....|+.||+-.+.+.+..+. ..+....++.|-.|-
T Consensus 136 -------~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IY 184 (361)
T KOG1430|consen 136 -------IINGDESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIY 184 (361)
T ss_pred -------cccCCCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEcccccc
Confidence 11122222222 346899999999998887664 335777788877776
No 280
>PRK05865 hypothetical protein; Provisional
Probab=98.66 E-value=3.3e-07 Score=89.92 Aligned_cols=101 Identities=14% Similarity=0.055 Sum_probs=73.7
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ +.||..+ +.+|.++|+.|++ |+.... + ...+.++++|++|.+++.++++
T Consensus 2 kIL-VTGAT------GfIGs~L---a~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~ 60 (854)
T PRK05865 2 RIA-VTGAS------GVLGRGL---TARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT 60 (854)
T ss_pred EEE-EECCC------CHHHHHH---HHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh
Confidence 466 99999 9999999 6667778877764 543210 1 1257789999999998877654
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
.+|+|||+|+...+ .+++|+.++.++++++ .+.+. ++||++||.
T Consensus 61 -------~vD~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa----~~~gv--kr~V~iSS~ 104 (854)
T PRK05865 61 -------GADVVAHCAWVRGR-----------NDHINIDGTANVLKAM----AETGT--GRIVFTSSG 104 (854)
T ss_pred -------CCCEEEECCCcccc-----------hHHHHHHHHHHHHHHH----HHcCC--CeEEEECCc
Confidence 38999999986421 4678999988776654 34444 799999884
No 281
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.66 E-value=5.8e-07 Score=94.47 Aligned_cols=183 Identities=12% Similarity=-0.027 Sum_probs=108.2
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC----cEEEE--cCHHH---HHHHHHHHHhhC-----CCCceEEEE
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS----KLFYQ--NCWDK---ANDAISKILTEK-----PSAQCIAME 90 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g----~~v~~--r~~~~---~~~~~~~l~~~~-----~~~~~~~~~ 90 (292)
.++++ |||++ +-||..+ +.+|...+ ..|++ |+... .+...+.+.... ...++.++.
T Consensus 971 ~~~Vl-vTGat------GflG~~l---~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~ 1040 (1389)
T TIGR03443 971 PITVF-LTGAT------GFLGSFI---LRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVL 1040 (1389)
T ss_pred CceEE-EeCCc------cccHHHH---HHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEe
Confidence 46777 99999 9999999 55555544 56654 65222 222222111100 013789999
Q ss_pred ccCCChHH--HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEE
Q psy4251 91 LDLCRLKS--VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVV 168 (292)
Q Consensus 91 ~Dls~~~~--v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~ 168 (292)
+|++++.- -....+++. ..+|++||||+.... ...++.....|+.|+..+++.+.. .+. .++++
T Consensus 1041 gDl~~~~lgl~~~~~~~l~---~~~d~iiH~Aa~~~~-----~~~~~~~~~~nv~gt~~ll~~a~~----~~~--~~~v~ 1106 (1389)
T TIGR03443 1041 GDLSKEKFGLSDEKWSDLT---NEVDVIIHNGALVHW-----VYPYSKLRDANVIGTINVLNLCAE----GKA--KQFSF 1106 (1389)
T ss_pred ccCCCccCCcCHHHHHHHH---hcCCEEEECCcEecC-----ccCHHHHHHhHHHHHHHHHHHHHh----CCC--ceEEE
Confidence 99986521 012223332 358999999997641 122344556799999888887642 233 68999
Q ss_pred EcCcccccccCC-----------CCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 169 VSSESHRYSYIT-----------KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 169 vsS~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
+||.+....... ...+..+.... .........|+.||.+.+.+++..+. .|+.+..+.||.|-
T Consensus 1107 vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~ 1180 (1389)
T TIGR03443 1107 VSSTSALDTEYYVNLSDELVQAGGAGIPESDDLM--GSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVT 1180 (1389)
T ss_pred EeCeeecCcccccchhhhhhhccCCCCCcccccc--cccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccc
Confidence 999865532100 00000000000 00111235699999999998887543 37999999999997
No 282
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.65 E-value=1.9e-07 Score=78.62 Aligned_cols=180 Identities=13% Similarity=0.006 Sum_probs=121.1
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC-HHHHHHHHHHHHhhC--CCCceEEEEccCCChHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC-WDKANDAISKILTEK--PSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~-~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v 99 (292)
+|+++ |||-| +--|.-+ +.-|.+.|+.|.+ |. ......-. +|.... .+.++.++.+||+|..++
T Consensus 2 ~K~AL-ITGIT------GQDGsYL---a~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l 70 (345)
T COG1089 2 GKVAL-ITGIT------GQDGSYL---AELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNL 70 (345)
T ss_pred CceEE-Eeccc------CCchHHH---HHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHH
Confidence 67888 99999 7778888 4556688888875 32 11111111 221111 144689999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
.++++++ .+|-+.|-|+-.. -..+.+.-+.+.+++.+|+..|+++..-+- ..+ .|+..-||+.-+. ..
T Consensus 71 ~r~l~~v-----~PdEIYNLaAQS~--V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~--~rfYQAStSE~fG-~v 138 (345)
T COG1089 71 LRILEEV-----QPDEIYNLAAQSH--VGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKK--TRFYQASTSELYG-LV 138 (345)
T ss_pred HHHHHhc-----Cchhheecccccc--ccccccCcceeeeechhHHHHHHHHHHHhC--Ccc--cEEEecccHHhhc-Cc
Confidence 9999888 5888888887653 233455556788999999999999876443 223 6887777764332 21
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc---CCCeEEEEecCC
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY---KYKIALSSRHCC 234 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~gi~v~~v~PG 234 (292)
+.. ..++..+|.+.+.|+.+|....-++..+...+. ..||-+|.=.|.
T Consensus 139 ~~~-------pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~ 189 (345)
T COG1089 139 QEI-------PQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL 189 (345)
T ss_pred ccC-------ccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence 100 012345667889999999999988888877764 336777766654
No 283
>KOG4022|consensus
Probab=98.58 E-value=2e-06 Score=66.62 Aligned_cols=176 Identities=10% Similarity=-0.002 Sum_probs=111.7
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
+.++ |-|+- +.+|.++ +..+-..++-|..-+...-++ ...-..+..|-+=-++-+.+.++
T Consensus 4 grVi-vYGGk------GALGSac---v~~FkannywV~siDl~eNe~----------Ad~sI~V~~~~swtEQe~~v~~~ 63 (236)
T KOG4022|consen 4 GRVI-VYGGK------GALGSAC---VEFFKANNYWVLSIDLSENEQ----------ADSSILVDGNKSWTEQEQSVLEQ 63 (236)
T ss_pred ceEE-EEcCc------chHhHHH---HHHHHhcCeEEEEEeeccccc----------ccceEEecCCcchhHHHHHHHHH
Confidence 3566 78887 8999999 666667888887544222111 12233455555556666677776
Q ss_pred HHHhCC--CccEEEEcccccCC--CCCCC-CcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcC-cccccccC
Q psy4251 106 YQKKFR--SLNILVLNAGVFGL--GFSHT-EDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSS-ESHRYSYI 179 (292)
Q Consensus 106 ~~~~~~--~id~lI~nAg~~~~--~~~~~-~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS-~~~~~~~~ 179 (292)
+-+... ++|.+++-||-+.. ....+ .++-+-++...+...-.-.+....+|+. |-++-++. -.+..+.
T Consensus 64 vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~-----GGLL~LtGAkaAl~gT- 137 (236)
T KOG4022|consen 64 VGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP-----GGLLQLTGAKAALGGT- 137 (236)
T ss_pred HHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-----CceeeecccccccCCC-
Confidence 665443 79999999987631 11111 1122334444455555555555555542 44444444 4444433
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc--CCCeEEEEecCCccc-cccccccc
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY--KYKIALSSRHCCWKI-TVSKKWWR 245 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~gi~v~~v~PG~v~-~~~~~~~~ 245 (292)
| ++-.|+.+|++++.++++|+.+-. +.|--+.+|.|-..+ +|.|++.+
T Consensus 138 -----------P-------gMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP 188 (236)
T KOG4022|consen 138 -----------P-------GMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMP 188 (236)
T ss_pred -----------C-------cccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCC
Confidence 4 899999999999999999998764 236788899999999 99998754
No 284
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.53 E-value=9.9e-07 Score=71.17 Aligned_cols=82 Identities=15% Similarity=0.063 Sum_probs=64.7
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ |+|.++ +..|.+.|+.|+ .|+.++++.....+.. ..++.++++|++|.+++.++++
T Consensus 2 ~vl-VtGGt-------G~gg~l---a~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~ 67 (177)
T PRK08309 2 HAL-VIGGT-------GMLKRV---SLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIK 67 (177)
T ss_pred EEE-EECcC-------HHHHHH---HHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHH
Confidence 466 99995 677777 667778887765 4887777666555532 3478899999999999999999
Q ss_pred HHHHhCCCccEEEEcccc
Q psy4251 105 EYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~ 122 (292)
.+.++++++|++|+..-.
T Consensus 68 ~~l~~~g~id~lv~~vh~ 85 (177)
T PRK08309 68 STIEKNGPFDLAVAWIHS 85 (177)
T ss_pred HHHHHcCCCeEEEEeccc
Confidence 999989999999987654
No 285
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.45 E-value=2.5e-06 Score=74.14 Aligned_cols=95 Identities=9% Similarity=-0.108 Sum_probs=57.3
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
|||||+ +.||..+ +..|.+.|+.|++ |+.++..... ... ..|+.. .. ..
T Consensus 2 lVtGat------G~iG~~l---~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~--~~~~~~-~~-------~~ 52 (292)
T TIGR01777 2 LITGGT------GFIGRAL---TQRLTKDGHEVTILTRSPPAGANTK----------WEG--YKPWAP-LA-------ES 52 (292)
T ss_pred EEEccc------chhhHHH---HHHHHHcCCEEEEEeCCCCCCCccc----------cee--eecccc-cc-------hh
Confidence 499999 9999999 5556677877764 6544321110 001 112221 11 11
Q ss_pred HhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHH
Q psy4251 108 KKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLE 153 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll 153 (292)
.....+|+|||+||........+.+..+..+++|+.++..+++++.
T Consensus 53 ~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~ 98 (292)
T TIGR01777 53 EALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIA 98 (292)
T ss_pred hhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence 2235699999999975322222334445678899999888887765
No 286
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.37 E-value=9.8e-07 Score=74.13 Aligned_cols=101 Identities=10% Similarity=0.074 Sum_probs=70.9
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
.+-+ ||..+ ++|||+++ +.+++.+|+.|+.-+... .+.. . ....+|+++.+++.++++.
T Consensus 15 ~VR~-itN~S-----SGgIG~AI---A~~la~~Ga~Vvlv~~~~------~l~~---~---~~~~~Dv~d~~s~~~l~~~ 73 (227)
T TIGR02114 15 SVRS-ITNHS-----TGHLGKII---TETFLSAGHEVTLVTTKR------ALKP---E---PHPNLSIREIETTKDLLIT 73 (227)
T ss_pred Ccee-ecCCc-----ccHHHHHH---HHHHHHCCCEEEEEcChh------hccc---c---cCCcceeecHHHHHHHHHH
Confidence 3445 66553 28899999 666778898887532110 1111 0 1246899999999999999
Q ss_pred HHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHHHHHHH
Q psy4251 106 YQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAHFYLTL 150 (292)
Q Consensus 106 ~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~ 150 (292)
+.+.++++|++|||||+.. +..+.+.++|+++ +..+.+++++
T Consensus 74 v~~~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~---~~~~~~~~~~ 117 (227)
T TIGR02114 74 LKELVQEHDILIHSMAVSDYTPVYMTDLEQVQAS---DNLNEFLSKQ 117 (227)
T ss_pred HHHHcCCCCEEEECCEeccccchhhCCHHHHhhh---cchhhhhccc
Confidence 9999999999999999753 4566777777766 4455666655
No 287
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.23 E-value=3.2e-06 Score=73.76 Aligned_cols=82 Identities=21% Similarity=0.154 Sum_probs=57.9
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEcCH---HHHHHHHHHHHhhCCCCceEEEEccCCC
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQNCW---DKANDAISKILTEKPSAQCIAMELDLCR 95 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dls~ 95 (292)
++++|+++ |+|+ +|+|+++ +..|+..|+ .|+.|+. +++++..+++.+.. ..+.+..+|+++
T Consensus 123 ~~~~k~vl-I~GA-------GGagrAi---a~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~ 189 (289)
T PRK12548 123 DVKGKKLT-VIGA-------GGAATAI---QVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLND 189 (289)
T ss_pred CcCCCEEE-EECC-------cHHHHHH---HHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhh
Confidence 46789999 9999 7999999 444555554 4456886 78888888886553 345566789887
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEccccc
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
.+++.+.++ ..|+||||-.+.
T Consensus 190 ~~~~~~~~~-------~~DilINaTp~G 210 (289)
T PRK12548 190 TEKLKAEIA-------SSDILVNATLVG 210 (289)
T ss_pred hhHHHhhhc-------cCCEEEEeCCCC
Confidence 766654332 359999987553
No 288
>PLN00016 RNA-binding protein; Provisional
Probab=98.23 E-value=2.9e-05 Score=70.48 Aligned_cols=149 Identities=11% Similarity=-0.063 Sum_probs=85.7
Q ss_pred CCceEEEEc----CCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHH-------HHHHhhCCCCceEEEE
Q psy4251 24 NGCLAILCT----GDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAI-------SKILTEKPSAQCIAME 90 (292)
Q Consensus 24 ~g~~~vlIt----Ga~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~-------~~l~~~~~~~~~~~~~ 90 (292)
..++++ || ||+ +-||..+ +.+|.+.|+.|++ |+........ .++. ...+.++.
T Consensus 51 ~~~~VL-Vt~~~~Gat------G~iG~~l---v~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~ 116 (378)
T PLN00016 51 EKKKVL-IVNTNSGGH------AFIGFYL---AKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVW 116 (378)
T ss_pred ccceEE-EEeccCCCc------eeEhHHH---HHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEE
Confidence 346677 99 999 9999999 5566677877764 6644322111 1221 12478889
Q ss_pred ccCCChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEc
Q psy4251 91 LDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVS 170 (292)
Q Consensus 91 ~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vs 170 (292)
+|+.| +.+++ + ...+|+||++++.. ..+ ++.++..+++.+. .++|++|
T Consensus 117 ~D~~d---~~~~~----~-~~~~d~Vi~~~~~~------------------~~~----~~~ll~aa~~~gv--kr~V~~S 164 (378)
T PLN00016 117 GDPAD---VKSKV----A-GAGFDVVYDNNGKD------------------LDE----VEPVADWAKSPGL--KQFLFCS 164 (378)
T ss_pred ecHHH---HHhhh----c-cCCccEEEeCCCCC------------------HHH----HHHHHHHHHHcCC--CEEEEEc
Confidence 99876 22222 1 13689999987621 111 2334444444444 6999999
Q ss_pred CcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 171 SESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 171 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
|...+..... .....+ ....+ +. +|...+.+.+ ..++.+..+.|+.+-
T Consensus 165 S~~vyg~~~~-~p~~E~-------~~~~p---~~-sK~~~E~~l~-------~~~l~~~ilRp~~vy 212 (378)
T PLN00016 165 SAGVYKKSDE-PPHVEG-------DAVKP---KA-GHLEVEAYLQ-------KLGVNWTSFRPQYIY 212 (378)
T ss_pred cHhhcCCCCC-CCCCCC-------CcCCC---cc-hHHHHHHHHH-------HcCCCeEEEeceeEE
Confidence 9865432110 000000 00111 11 7877776543 236889999999887
No 289
>KOG1221|consensus
Probab=98.20 E-value=1.7e-05 Score=72.34 Aligned_cols=191 Identities=13% Similarity=0.033 Sum_probs=113.6
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcC------HHH-----HHHHHHHHHhhCCC--Cce
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNC------WDK-----ANDAISKILTEKPS--AQC 86 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~------~~~-----~~~~~~~l~~~~~~--~~~ 86 (292)
-++||+++ ||||| +-+|+.+.+.+++-...-..|+ .|. .++ .+.+-+++++..|. .++
T Consensus 9 f~~~k~i~-vTG~t------GFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv 81 (467)
T KOG1221|consen 9 FYKNKTIF-VTGAT------GFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKV 81 (467)
T ss_pred HhCCCeEE-EEccc------chhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecc
Confidence 36899999 99999 9999999666555543323444 232 122 22334455555443 488
Q ss_pred EEEEccCCChHHHHH-H-HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCc
Q psy4251 87 IAMELDLCRLKSVKK-F-AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFA 164 (292)
Q Consensus 87 ~~~~~Dls~~~~v~~-~-~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~ 164 (292)
..+.+|+++++-=-+ - .+.+ ...+|++||+|+... -.+-++..+.+|..|+..+++.+....+- .
T Consensus 82 ~pi~GDi~~~~LGis~~D~~~l---~~eV~ivih~AAtvr-----Fde~l~~al~iNt~Gt~~~l~lak~~~~l-----~ 148 (467)
T KOG1221|consen 82 VPIAGDISEPDLGISESDLRTL---ADEVNIVIHSAATVR-----FDEPLDVALGINTRGTRNVLQLAKEMVKL-----K 148 (467)
T ss_pred eeccccccCcccCCChHHHHHH---HhcCCEEEEeeeeec-----cchhhhhhhhhhhHhHHHHHHHHHHhhhh-----h
Confidence 888999987643111 1 1112 236999999999753 34456788999999999999988765432 4
Q ss_pred EEEEEcCcccccccCC-CCCCC-------cc------ccCc-C-----CCCCC-hhhhHHHHhHHHHHHHHHHHHhHhcC
Q psy4251 165 RVVVVSSESHRYSYIT-KDTIS-------KS------VLSV-E-----NYSDF-WAMTAYNDTKLCNVLFGEKLATLWYK 223 (292)
Q Consensus 165 ~iV~vsS~~~~~~~~~-~~~~~-------~~------~~~~-~-----~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~ 223 (292)
-.|.||+.-+...... .+.+. .+ ..-. + .+.-. .....|.-+|+..+++...-+..
T Consensus 149 ~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~--- 225 (467)
T KOG1221|consen 149 ALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAEN--- 225 (467)
T ss_pred eEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccC---
Confidence 6777877644311100 01010 00 0000 0 00000 12357888999888887765554
Q ss_pred CCeEEEEecCCccc
Q psy4251 224 YKIALSSRHCCWKI 237 (292)
Q Consensus 224 ~gi~v~~v~PG~v~ 237 (292)
+.+..+.|..|-
T Consensus 226 --lPivIiRPsiI~ 237 (467)
T KOG1221|consen 226 --LPLVIIRPSIIT 237 (467)
T ss_pred --CCeEEEcCCcee
Confidence 456777777666
No 290
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=98.19 E-value=8.2e-05 Score=69.13 Aligned_cols=192 Identities=13% Similarity=0.076 Sum_probs=119.9
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC---HHHHHHHHHHHHhhC--CCCceEEEEccCC
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC---WDKANDAISKILTEK--PSAQCIAMELDLC 94 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~---~~~~~~~~~~l~~~~--~~~~~~~~~~Dls 94 (292)
.....++.++ ||||+ .+-||.++ +..|...|+.||+.. .+.-.+..+.|-..+ ++..+.+++++++
T Consensus 391 ~~~y~d~val-VTGA~-----~gSIaa~V---v~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~ 461 (866)
T COG4982 391 GGTYGDKVAL-VTGAS-----KGSIAAAV---VARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMG 461 (866)
T ss_pred CCCcccceEE-EecCC-----CcchHHHH---HHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEecccc
Confidence 4667788999 99998 25578777 899999999999732 334445555554333 3678999999999
Q ss_pred ChHHHHHHHHHHHHhCC--------------CccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHh
Q psy4251 95 RLKSVKKFAEEYQKKFR--------------SLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIK 158 (292)
Q Consensus 95 ~~~~v~~~~~~~~~~~~--------------~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~ 158 (292)
+..+|+.+++.|-.+.. .+|.++-.|+.- +...+.... -|..+.+-+.+...|+-.+.+.-..
T Consensus 462 SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~ 540 (866)
T COG4982 462 SYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSS 540 (866)
T ss_pred chhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccc
Confidence 99999999999986532 256666666543 212222221 2333344444444444444333221
Q ss_pred cC-CCCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHh--cCCCeEEEEecCCc
Q psy4251 159 GA-KLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLW--YKYKIALSSRHCCW 235 (292)
Q Consensus 159 ~~-~~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~--~~~gi~v~~v~PG~ 235 (292)
.. ...-+||.-+|.-. ..|.+-..|+-+|++++.+...+..|- +. -+.+..-.-||
T Consensus 541 r~v~~R~hVVLPgSPNr--------------------G~FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGW 599 (866)
T COG4982 541 RGVDTRLHVVLPGSPNR--------------------GMFGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGW 599 (866)
T ss_pred cCcccceEEEecCCCCC--------------------CccCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheee
Confidence 11 10134555555421 223366799999999998877666553 32 26777778899
Q ss_pred cc--ccccc
Q psy4251 236 KI--TVSKK 242 (292)
Q Consensus 236 v~--~~~~~ 242 (292)
++ .++.+
T Consensus 600 trGTGLMg~ 608 (866)
T COG4982 600 TRGTGLMGH 608 (866)
T ss_pred eccccccCC
Confidence 99 66554
No 291
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.18 E-value=2.5e-05 Score=72.53 Aligned_cols=66 Identities=14% Similarity=-0.013 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCC
Q psy4251 145 HFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKY 224 (292)
Q Consensus 145 ~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~ 224 (292)
.+.+++..++.|.. . +|||+++|..... ....|+.+|+++..+++++++|+ ..
T Consensus 102 ~~~~~~~~l~~l~~--~--griv~i~s~~~~~----------------------~~~~~~~akaal~gl~rsla~E~-~~ 154 (450)
T PRK08261 102 LYEFFHPVLRSLAP--C--GRVVVLGRPPEAA----------------------ADPAAAAAQRALEGFTRSLGKEL-RR 154 (450)
T ss_pred HHHHHHHHHHhccC--C--CEEEEEccccccC----------------------CchHHHHHHHHHHHHHHHHHHHh-hc
Confidence 34566667777753 3 8999999975542 23469999999999999999999 66
Q ss_pred CeEEEEecCCccc
Q psy4251 225 KIALSSRHCCWKI 237 (292)
Q Consensus 225 gi~v~~v~PG~v~ 237 (292)
+++++.+.|+...
T Consensus 155 gi~v~~i~~~~~~ 167 (450)
T PRK08261 155 GATAQLVYVAPGA 167 (450)
T ss_pred CCEEEEEecCCCC
Confidence 9999999998655
No 292
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.13 E-value=6.9e-06 Score=74.53 Aligned_cols=83 Identities=11% Similarity=0.079 Sum_probs=55.9
Q ss_pred CCCCCceEEEEcCCC--------CCC-CCccc-chhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEE
Q psy4251 21 STYNGCLAILCTGDM--------EFY-PRYTG-LKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIA 88 (292)
Q Consensus 21 ~~l~g~~~vlItGa~--------~~~-~~~~G-iG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~ 88 (292)
.+++||+++ ||||. |++ |+++| +|+++ +.++..+|+.|+. ++.+ . . .+. ..
T Consensus 184 ~~l~gk~vl-ITgG~T~E~ID~VR~isN~SSG~~G~ai---A~~l~~~Ga~V~~v~~~~~-~-------~--~~~---~~ 246 (399)
T PRK05579 184 KDLAGKRVL-ITAGPTREPIDPVRYITNRSSGKMGYAL---ARAAARRGADVTLVSGPVN-L-------P--TPA---GV 246 (399)
T ss_pred cccCCCEEE-EeCCCccccccceeeeccCCcchHHHHH---HHHHHHCCCEEEEeCCCcc-c-------c--CCC---Cc
Confidence 568999999 99990 000 01156 89999 6667778888764 3321 1 0 111 13
Q ss_pred EEccCCChHHHHHHHHHHHHhCCCccEEEEccccc
Q psy4251 89 MELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 89 ~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
..+|+++.+++.+.++ +.++++|++|+|||+.
T Consensus 247 ~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 247 KRIDVESAQEMLDAVL---AALPQADIFIMAAAVA 278 (399)
T ss_pred EEEccCCHHHHHHHHH---HhcCCCCEEEEccccc
Confidence 4689998888776655 4578899999999985
No 293
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.12 E-value=2.1e-05 Score=68.45 Aligned_cols=103 Identities=12% Similarity=0.018 Sum_probs=67.3
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
++ ||||| +.+|..+ +.+|.+.|+.|. +|+.++.. ...+..+.+|+.|.+++.+.++.
T Consensus 2 il-VtGat------G~iG~~v---v~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~ 60 (285)
T TIGR03649 2 IL-LTGGT------GKTASRI---ARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSS 60 (285)
T ss_pred EE-EEcCC------ChHHHHH---HHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhc
Confidence 45 99999 9999999 555666676655 57765431 12455678999999999988765
Q ss_pred HHHhCCC-ccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 106 YQKKFRS-LNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 106 ~~~~~~~-id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
. +.+.. +|.++++++... +.. ...+.++...++.+- .|||++||..
T Consensus 61 ~-~~~~g~~d~v~~~~~~~~-------~~~------------~~~~~~i~aa~~~gv--~~~V~~Ss~~ 107 (285)
T TIGR03649 61 D-DGMEPEISAVYLVAPPIP-------DLA------------PPMIKFIDFARSKGV--RRFVLLSASI 107 (285)
T ss_pred c-cCcCCceeEEEEeCCCCC-------Chh------------HHHHHHHHHHHHcCC--CEEEEeeccc
Confidence 3 22344 899999876421 110 112334445555555 7999999854
No 294
>KOG2774|consensus
Probab=98.01 E-value=9.1e-06 Score=66.82 Aligned_cols=174 Identities=16% Similarity=0.095 Sum_probs=109.2
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
-+...++ |||+- +.+|.++|+.+...-.....|.. +..+-.+ ...+ .--++-.|+-|..+++++
T Consensus 42 ~~~PrvL-ITG~L------GQLG~~~A~LLR~~yGs~~VILS-DI~KPp~---~V~~-----~GPyIy~DILD~K~L~eI 105 (366)
T KOG2774|consen 42 QKAPRVL-ITGSL------GQLGRGLASLLRYMYGSECVILS-DIVKPPA---NVTD-----VGPYIYLDILDQKSLEEI 105 (366)
T ss_pred CCCCeEE-Eecch------HHHhHHHHHHHHHHhCCccEehh-hccCCch---hhcc-----cCCchhhhhhccccHHHh
Confidence 3455677 99999 99999999887766555544432 2111111 1111 223566888888887776
Q ss_pred HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD 182 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~ 182 (292)
+-. .+||.+||-.+.... ..+.+..-..+||+.|..++++....+ + -+|..-|.+.++.+..+..
T Consensus 106 VVn-----~RIdWL~HfSALLSA---vGE~NVpLA~~VNI~GvHNil~vAa~~-----k--L~iFVPSTIGAFGPtSPRN 170 (366)
T KOG2774|consen 106 VVN-----KRIDWLVHFSALLSA---VGETNVPLALQVNIRGVHNILQVAAKH-----K--LKVFVPSTIGAFGPTSPRN 170 (366)
T ss_pred hcc-----cccceeeeHHHHHHH---hcccCCceeeeecchhhhHHHHHHHHc-----C--eeEeecccccccCCCCCCC
Confidence 432 479999998776422 233445567899999999998876543 2 5666666666665543211
Q ss_pred CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEe-cCCccc
Q psy4251 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSR-HCCWKI 237 (292)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v-~PG~v~ 237 (292)
...--.+.. +...|+.||.-.+.+.+.+..++. +.+.++ .||.+.
T Consensus 171 PTPdltIQR-------PRTIYGVSKVHAEL~GEy~~hrFg---~dfr~~rfPg~is 216 (366)
T KOG2774|consen 171 PTPDLTIQR-------PRTIYGVSKVHAELLGEYFNHRFG---VDFRSMRFPGIIS 216 (366)
T ss_pred CCCCeeeec-------CceeechhHHHHHHHHHHHHhhcC---ccceecccCcccc
Confidence 111111122 568899999999999999888874 444444 355443
No 295
>KOG1429|consensus
Probab=98.01 E-value=0.00013 Score=61.85 Aligned_cols=174 Identities=8% Similarity=-0.022 Sum_probs=107.6
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCH--HHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCW--DKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
..+++.+++ ||||. |+-..+.+.+|...|+.|++-|. ..-+...+.. ....++..+.-|+..+
T Consensus 23 ~p~~~lrI~-itGga---------GFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p-- 87 (350)
T KOG1429|consen 23 KPSQNLRIL-ITGGA---------GFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP-- 87 (350)
T ss_pred cCCCCcEEE-EecCc---------chHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH--
Confidence 335678899 99999 55555668999999999987442 1222222222 1133566666666654
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
+.. .+|-++|-|....|..-... --+++.+|.+++..++..+... . .|++..|++..+.-+
T Consensus 88 ---l~~-------evD~IyhLAapasp~~y~~n--pvktIktN~igtln~lglakrv-----~--aR~l~aSTseVYgdp 148 (350)
T KOG1429|consen 88 ---LLK-------EVDQIYHLAAPASPPHYKYN--PVKTIKTNVIGTLNMLGLAKRV-----G--ARFLLASTSEVYGDP 148 (350)
T ss_pred ---HHH-------HhhhhhhhccCCCCcccccC--ccceeeecchhhHHHHHHHHHh-----C--ceEEEeecccccCCc
Confidence 322 26888888887765432222 1468999999999888766433 2 688888887555432
Q ss_pred CCCCCC--CccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCcc
Q psy4251 179 ITKDTI--SKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWK 236 (292)
Q Consensus 179 ~~~~~~--~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v 236 (292)
...... .|...++ -.+...|.-.|...+.|+.+..++. ||.|....+-.+
T Consensus 149 ~~hpq~e~ywg~vnp-----igpr~cydegKr~aE~L~~~y~k~~---giE~rIaRifNt 200 (350)
T KOG1429|consen 149 LVHPQVETYWGNVNP-----IGPRSCYDEGKRVAETLCYAYHKQE---GIEVRIARIFNT 200 (350)
T ss_pred ccCCCccccccccCc-----CCchhhhhHHHHHHHHHHHHhhccc---CcEEEEEeeecc
Confidence 221111 1222222 2256899999999999999988776 455555444333
No 296
>KOG1202|consensus
Probab=97.88 E-value=4.4e-05 Score=75.38 Aligned_cols=198 Identities=13% Similarity=0.010 Sum_probs=134.8
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-HHHHHH--HHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-WDKAND--AISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-~~~~~~--~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|+.+ |+||- +|.|+++|.++...+.+...+..|+ ....-+ .+...++. +.++.+-..|++..+..++
T Consensus 1768 eksYi-i~GGL------GGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~ 1838 (2376)
T KOG1202|consen 1768 EKSYI-IVGGL------GGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARG 1838 (2376)
T ss_pred cceEE-Eeccc------cchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHH
Confidence 46778 99999 9999999888766555544444565 122222 23445555 7788888899999999999
Q ss_pred HHHHHHHhCCCccEEEEccccc--CCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVF--GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
++++..+ .+++-.++|-|.+. +-+.+.++++|+..-+-.+.|+.+|-+.-...-..- ..+|..||.++-.++.
T Consensus 1839 Li~~s~k-l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L----dyFv~FSSvscGRGN~ 1913 (2376)
T KOG1202|consen 1839 LIEESNK-LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL----DYFVVFSSVSCGRGNA 1913 (2376)
T ss_pred HHHHhhh-cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc----ceEEEEEeecccCCCC
Confidence 9988754 57899999989886 346777999999999999999988776554433211 5788888887666653
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecC---Cccc-cccccc--cccCCccchh
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHC---CWKI-TVSKKW--WRFGTPVRTF 253 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~P---G~v~-~~~~~~--~~~~~~~~~~ 253 (292)
+.+.|+-+..+++.+++--..+ .-.|+.|-.=.- |.+. +|..+. -..-+|+++.
T Consensus 1914 -------------------GQtNYG~aNS~MERiceqRr~~-GfPG~AiQWGAIGDvGlilEnmgdNdTvvgGTLPQRM~ 1973 (2376)
T KOG1202|consen 1914 -------------------GQTNYGLANSAMERICEQRRHE-GFPGTAIQWGAIGDVGLILENMGDNDTVVGGTLPQRMP 1973 (2376)
T ss_pred -------------------cccccchhhHHHHHHHHHhhhc-CCCcceeeeecccceeeeeeecCCCCceeccccchhHH
Confidence 7888999999999888753322 222444443333 3344 555542 2223666766
Q ss_pred hhh
Q psy4251 254 SWI 256 (292)
Q Consensus 254 ~~~ 256 (292)
..+
T Consensus 1974 SCL 1976 (2376)
T KOG1202|consen 1974 SCL 1976 (2376)
T ss_pred HHH
Confidence 665
No 297
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.75 E-value=0.00023 Score=58.38 Aligned_cols=82 Identities=9% Similarity=0.061 Sum_probs=59.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEE--EEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLF--YQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v--~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
.++++++++ |.|++ +++|+.+++. +...|..| +.|+.+++++..+++.+.. ......+|+.+.++
T Consensus 24 ~~l~~~~vl-VlGgt------G~iG~~~a~~---l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~ 90 (194)
T cd01078 24 KDLKGKTAV-VLGGT------GPVGQRAAVL---LAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAA 90 (194)
T ss_pred cCCCCCEEE-EECCC------CHHHHHHHHH---HHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHH
Confidence 467899999 99999 9999999555 44555444 4599999988888876443 23455678888877
Q ss_pred HHHHHHHHHHhCCCccEEEEcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~ 122 (292)
+.+.++ ..|++|++...
T Consensus 91 ~~~~~~-------~~diVi~at~~ 107 (194)
T cd01078 91 RAAAIK-------GADVVFAAGAA 107 (194)
T ss_pred HHHHHh-------cCCEEEECCCC
Confidence 766543 36888886553
No 298
>PRK12320 hypothetical protein; Provisional
Probab=97.74 E-value=0.0002 Score=69.30 Aligned_cols=101 Identities=11% Similarity=-0.019 Sum_probs=68.7
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ ||||+ +-||..+ +.+|.+.|+.|++ |.... . . ...+.++++|+++.. +.++
T Consensus 2 kIL-VTGAa------GFIGs~L---a~~Ll~~G~~Vi~ldr~~~~-------~--~--~~~ve~v~~Dl~d~~-l~~a-- 57 (699)
T PRK12320 2 QIL-VTDAT------GAVGRSV---TRQLIAAGHTVSGIAQHPHD-------A--L--DPRVDYVCASLRNPV-LQEL-- 57 (699)
T ss_pred EEE-EECCC------CHHHHHH---HHHHHhCCCEEEEEeCChhh-------c--c--cCCceEEEccCCCHH-HHHH--
Confidence 466 99999 9999999 6667788888775 33211 1 1 236788999999873 3222
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
...+|+|||+|+.... + ...+|+.++.++++++.. .+ .+||++||..
T Consensus 58 -----l~~~D~VIHLAa~~~~------~----~~~vNv~Gt~nLleAA~~-----~G--vRiV~~SS~~ 104 (699)
T PRK12320 58 -----AGEADAVIHLAPVDTS------A----PGGVGITGLAHVANAAAR-----AG--ARLLFVSQAA 104 (699)
T ss_pred -----hcCCCEEEEcCccCcc------c----hhhHHHHHHHHHHHHHHH-----cC--CeEEEEECCC
Confidence 1358999999986411 1 125788888888887642 23 6899998763
No 299
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.72 E-value=0.0011 Score=55.80 Aligned_cols=147 Identities=10% Similarity=-0.068 Sum_probs=82.7
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEE--EEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLF--YQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v--~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
+|+||+ +.+|+.+++.+.+ .++.| +.|+..+ +..++++.. .+.++++|+.|.+++.+.++
T Consensus 2 ~V~Gat------G~~G~~v~~~L~~---~~~~V~~l~R~~~~--~~~~~l~~~----g~~vv~~d~~~~~~l~~al~--- 63 (233)
T PF05368_consen 2 LVTGAT------GNQGRSVVRALLS---AGFSVRALVRDPSS--DRAQQLQAL----GAEVVEADYDDPESLVAALK--- 63 (233)
T ss_dssp EEETTT------SHHHHHHHHHHHH---TTGCEEEEESSSHH--HHHHHHHHT----TTEEEES-TT-HHHHHHHHT---
T ss_pred EEECCc------cHHHHHHHHHHHh---CCCCcEEEEeccch--hhhhhhhcc----cceEeecccCCHHHHHHHHc---
Confidence 499999 9999999665554 55555 4577622 334445543 34567999999888776643
Q ss_pred HhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCcc
Q psy4251 108 KKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKS 187 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~ 187 (292)
.+|.|+++-+... ... ......+++++.. .+- .++|+ ||........
T Consensus 64 ----g~d~v~~~~~~~~------~~~--------~~~~~~li~Aa~~----agV--k~~v~-ss~~~~~~~~-------- 110 (233)
T PF05368_consen 64 ----GVDAVFSVTPPSH------PSE--------LEQQKNLIDAAKA----AGV--KHFVP-SSFGADYDES-------- 110 (233)
T ss_dssp ----TCSEEEEESSCSC------CCH--------HHHHHHHHHHHHH----HT---SEEEE-SEESSGTTTT--------
T ss_pred ----CCceEEeecCcch------hhh--------hhhhhhHHHhhhc----ccc--ceEEE-EEeccccccc--------
Confidence 5899998877542 111 1122334555443 233 57774 5543332110
Q ss_pred ccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc-cccc
Q psy4251 188 VLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI-TVSK 241 (292)
Q Consensus 188 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~ 241 (292)
...+ +...+-..|..++.+.+.. ++..+.+.||+.. ++..
T Consensus 111 ------~~~~-p~~~~~~~k~~ie~~l~~~-------~i~~t~i~~g~f~e~~~~ 151 (233)
T PF05368_consen 111 ------SGSE-PEIPHFDQKAEIEEYLRES-------GIPYTIIRPGFFMENLLP 151 (233)
T ss_dssp ------TTST-THHHHHHHHHHHHHHHHHC-------TSEBEEEEE-EEHHHHHT
T ss_pred ------cccc-ccchhhhhhhhhhhhhhhc-------cccceeccccchhhhhhh
Confidence 0111 2233334676665544432 7999999999877 5544
No 300
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.69 E-value=9.7e-05 Score=66.89 Aligned_cols=113 Identities=9% Similarity=0.039 Sum_probs=68.3
Q ss_pred CCCCCceEEEEcCCC--------CCC-CCccc-chhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEE
Q psy4251 21 STYNGCLAILCTGDM--------EFY-PRYTG-LKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIA 88 (292)
Q Consensus 21 ~~l~g~~~vlItGa~--------~~~-~~~~G-iG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~ 88 (292)
.+++||+++ ||||. |++ +.++| +|.++ +.++..+|+.|+. +.... ..|. . .
T Consensus 181 ~~~~~~~vl-it~g~t~E~iD~VR~itN~SSG~~g~~~---a~~~~~~Ga~V~~~~g~~~~----------~~~~-~--~ 243 (390)
T TIGR00521 181 EDLEGKRVL-ITAGPTREPIDPVRFISNLSSGKMGLAL---AEAAYKRGADVTLITGPVSL----------LTPP-G--V 243 (390)
T ss_pred cccCCceEE-EecCCccCCCCceeeecCCCcchHHHHH---HHHHHHCCCEEEEeCCCCcc----------CCCC-C--c
Confidence 468999999 99982 011 12377 99999 6667788888764 22211 0111 2 2
Q ss_pred EEccCCChHHH-HHHHHHHHHhCCCccEEEEcccccC-CCCCCCC---cchhhhhhhhhhHHHHHHHHHH
Q psy4251 89 MELDLCRLKSV-KKFAEEYQKKFRSLNILVLNAGVFG-LGFSHTE---DGFETTFQVNHLAHFYLTLQLE 153 (292)
Q Consensus 89 ~~~Dls~~~~v-~~~~~~~~~~~~~id~lI~nAg~~~-~~~~~~~---~~~~~~~~vN~~~~~~l~~~ll 153 (292)
..+|+++.++. +.+.+++ .+++|++|+|||+.. .+.+... +..+..+.+|+.-+--++..+.
T Consensus 244 ~~~~v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 244 KSIKVSTAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred EEEEeccHHHHHHHHHHhh---cccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence 56899998888 5555443 467999999999862 1111111 1112345566666666666554
No 301
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.56 E-value=0.00028 Score=59.35 Aligned_cols=95 Identities=13% Similarity=0.139 Sum_probs=57.6
Q ss_pred eEEEEcCCCCCCCCccc-chhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTG-LKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~G-iG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
+-+ ||+.+ +| ||+++ +.+|..+|+.|+. |... ... .+...+.+++++ +...+.
T Consensus 17 VR~-itN~S------SG~iG~aL---A~~L~~~G~~V~li~r~~~--------~~~-~~~~~v~~i~v~-----s~~~m~ 72 (229)
T PRK06732 17 VRG-ITNHS------TGQLGKII---AETFLAAGHEVTLVTTKTA--------VKP-EPHPNLSIIEIE-----NVDDLL 72 (229)
T ss_pred cee-ecCcc------chHHHHHH---HHHHHhCCCEEEEEECccc--------ccC-CCCCCeEEEEEe-----cHHHHH
Confidence 556 88777 66 99999 5556678887764 4321 001 011245555532 233333
Q ss_pred HHHHHhCCCccEEEEcccccC--CCCCCCCcchhhhhhhhhhHH
Q psy4251 104 EEYQKKFRSLNILVLNAGVFG--LGFSHTEDGFETTFQVNHLAH 145 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~--~~~~~~~~~~~~~~~vN~~~~ 145 (292)
+.+.+.++.+|+||||||+.. +....+.+++..++++|.+..
T Consensus 73 ~~l~~~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 73 ETLEPLVKDHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred HHHHHHhcCCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence 344444567999999999863 334456777888887765544
No 302
>KOG1431|consensus
Probab=97.47 E-value=0.0012 Score=54.26 Aligned_cols=149 Identities=11% Similarity=0.019 Sum_probs=83.0
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEE---EccCCChHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAM---ELDLCRLKSVKKF 102 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~---~~Dls~~~~v~~~ 102 (292)
++++ |||++ +=.|.++.+.+.+-+.. +.+..++ .+||++.++++++
T Consensus 2 ~kIl-VtGg~------GLVGsAi~~vv~~q~~~------------------------~e~wvf~~skd~DLt~~a~t~~l 50 (315)
T KOG1431|consen 2 KKIL-VTGGT------GLVGSAIVKVVQEQGFD------------------------DENWVFIGSKDADLTNLADTRAL 50 (315)
T ss_pred ceEE-EecCC------chHHHHHHHHHHhcCCC------------------------CcceEEeccccccccchHHHHHH
Confidence 4567 99998 77899995553332221 2233333 5999999999999
Q ss_pred HHHHHHhCCCccEEEEcccccCC-CCCC--CCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGL-GFSH--TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~-~~~~--~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
++.. ++-.|||-|+..+. +... ..|-+...+++ .-++++.+-.+ .. -++|+..|. +..+..
T Consensus 51 F~~e-----kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~i----ndNVlhsa~e~----gv--~K~vsclSt-CIfPdk 114 (315)
T KOG1431|consen 51 FESE-----KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQI----NDNVLHSAHEH----GV--KKVVSCLST-CIFPDK 114 (315)
T ss_pred Hhcc-----CCceeeehHhhhcchhhcCCCchHHHhhccee----chhHHHHHHHh----ch--hhhhhhcce-eecCCC
Confidence 8875 46778887776543 3332 23333333333 33333333222 11 355555553 444443
Q ss_pred CCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcC
Q psy4251 180 TKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYK 223 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~ 223 (292)
....++...+.. ...-+..-.|+.+|.++.-..++++.++..
T Consensus 115 t~yPIdEtmvh~--gpphpsN~gYsyAKr~idv~n~aY~~qhg~ 156 (315)
T KOG1431|consen 115 TSYPIDETMVHN--GPPHPSNFGYSYAKRMIDVQNQAYRQQHGR 156 (315)
T ss_pred CCCCCCHHHhcc--CCCCCCchHHHHHHHHHHHHHHHHHHHhCC
Confidence 333333222211 000113457999998888777888888753
No 303
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.45 E-value=0.00061 Score=52.40 Aligned_cols=79 Identities=10% Similarity=0.054 Sum_probs=55.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.+++|++++ |-|+ +|.|++++..+..++.....|+.|+.++++++.+++. +..+.++.. .+ +.
T Consensus 8 ~~l~~~~vl-viGa-------Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~----~~~~~~~~~--~~---~~ 70 (135)
T PF01488_consen 8 GDLKGKRVL-VIGA-------GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG----GVNIEAIPL--ED---LE 70 (135)
T ss_dssp STGTTSEEE-EESS-------SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT----GCSEEEEEG--GG---HC
T ss_pred CCcCCCEEE-EECC-------HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC----ccccceeeH--HH---HH
Confidence 478899999 9998 7999999766666644446677799999999988882 334555543 22 22
Q ss_pred HHHHHHHHhCCCccEEEEccccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
+. + ...|++|++.+..
T Consensus 71 ~~---~----~~~DivI~aT~~~ 86 (135)
T PF01488_consen 71 EA---L----QEADIVINATPSG 86 (135)
T ss_dssp HH---H----HTESEEEE-SSTT
T ss_pred HH---H----hhCCeEEEecCCC
Confidence 22 2 2479999998765
No 304
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=97.38 E-value=0.0027 Score=53.96 Aligned_cols=161 Identities=14% Similarity=0.027 Sum_probs=85.1
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHH
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~ 107 (292)
+||||| +=||.++ +.+|-..|+.|+ .|+..+.++.. ...+. ..+.+.+ ..
T Consensus 2 liTGgT------GlIG~~L---~~~L~~~gh~v~iltR~~~~~~~~~--------~~~v~-------~~~~~~~----~~ 53 (297)
T COG1090 2 LITGGT------GLIGRAL---TARLRKGGHQVTILTRRPPKASQNL--------HPNVT-------LWEGLAD----AL 53 (297)
T ss_pred eEeccc------cchhHHH---HHHHHhCCCeEEEEEcCCcchhhhc--------Ccccc-------ccchhhh----cc
Confidence 499999 8899999 777766666655 57765543311 00111 1111111 11
Q ss_pred HhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCCCcc
Q psy4251 108 KKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKS 187 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~ 187 (292)
. .++|+|||-||..-.....+.+.=+. =..+.+..++.+.....+... +.++..-+|..++.+......+..+
T Consensus 54 ~--~~~DavINLAG~~I~~rrWt~~~K~~----i~~SRi~~T~~L~e~I~~~~~-~P~~~isaSAvGyYG~~~~~~~tE~ 126 (297)
T COG1090 54 T--LGIDAVINLAGEPIAERRWTEKQKEE----IRQSRINTTEKLVELIAASET-KPKVLISASAVGYYGHSGDRVVTEE 126 (297)
T ss_pred c--CCCCEEEECCCCccccccCCHHHHHH----HHHHHhHHHHHHHHHHHhccC-CCcEEEecceEEEecCCCceeeecC
Confidence 1 16999999999752112123332222 255778888888888875432 1566666666677665311111111
Q ss_pred ccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 188 VLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 188 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
.+ ..++|....++.- +..+......|+||..+.-|.|.
T Consensus 127 --~~-~g~~Fla~lc~~W---------E~~a~~a~~~gtRvvllRtGvVL 164 (297)
T COG1090 127 --SP-PGDDFLAQLCQDW---------EEEALQAQQLGTRVVLLRTGVVL 164 (297)
T ss_pred --CC-CCCChHHHHHHHH---------HHHHhhhhhcCceEEEEEEEEEe
Confidence 11 0111211111111 12233334458999999999988
No 305
>KOG1203|consensus
Probab=97.26 E-value=0.0052 Score=55.53 Aligned_cols=130 Identities=16% Similarity=0.040 Sum_probs=79.6
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
..+-.+++ |+||| +++|+-+ +..|.++|+.+. +|+.++.++... +... ......+..|.....++
T Consensus 76 ~~~~~~Vl-VvGat------G~vG~~i---v~~llkrgf~vra~VRd~~~a~~~~~-~~~~--d~~~~~v~~~~~~~~d~ 142 (411)
T KOG1203|consen 76 SKKPTTVL-VVGAT------GKVGRRI---VKILLKRGFSVRALVRDEQKAEDLLG-VFFV--DLGLQNVEADVVTAIDI 142 (411)
T ss_pred CCCCCeEE-EecCC------CchhHHH---HHHHHHCCCeeeeeccChhhhhhhhc-cccc--ccccceeeeccccccch
Confidence 34455677 99999 9999999 666777887765 488888777665 1111 22444556666665554
Q ss_pred HHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYS 177 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~ 177 (292)
.....+... -...+++-++|..+... +..-..+|-+.|..++++++... .- .|+|.+||+.....
T Consensus 143 ~~~~~~~~~--~~~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~a----Gv--k~~vlv~si~~~~~ 207 (411)
T KOG1203|consen 143 LKKLVEAVP--KGVVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKA----GV--KRVVLVGSIGGTKF 207 (411)
T ss_pred hhhhhhhcc--ccceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHh----CC--ceEEEEEeecCccc
Confidence 444333321 13566676666543222 12223456677888888887433 23 69999988765543
No 306
>KOG2733|consensus
Probab=97.25 E-value=0.0014 Score=57.39 Aligned_cols=82 Identities=11% Similarity=0.050 Sum_probs=59.6
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHh-hcC--cEEEEcCHHHHHHHHHHHHhhCCC--CceEEEEccCCChHHHHHH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLV-QSS--KLFYQNCWDKANDAISKILTEKPS--AQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~-~~g--~~v~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dls~~~~v~~~ 102 (292)
+| |-||+ +=-|.-+.+.+.... ..+ ..|.+||+++++++++++.+..+. .+...+.||.+|+++++++
T Consensus 8 vV-IyGAS------GfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~em 80 (423)
T KOG2733|consen 8 VV-IYGAS------GFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEM 80 (423)
T ss_pred EE-EEccc------cccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHH
Confidence 56 99998 555666644333311 134 445579999999999999877542 2334889999999999999
Q ss_pred HHHHHHhCCCccEEEEccccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~ 123 (292)
+++. .++|||+|..
T Consensus 81 ak~~-------~vivN~vGPy 94 (423)
T KOG2733|consen 81 AKQA-------RVIVNCVGPY 94 (423)
T ss_pred Hhhh-------EEEEeccccc
Confidence 8876 7999999964
No 307
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.20 E-value=0.0012 Score=59.45 Aligned_cols=78 Identities=10% Similarity=0.157 Sum_probs=56.7
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
+.++ |.|+ +|+|..+|+-+.+.....++|..|+.+++.++.+.. ..++.++++|+.+.+.+.+++++
T Consensus 2 ~~il-viGa-------G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~ 68 (389)
T COG1748 2 MKIL-VIGA-------GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD 68 (389)
T ss_pred CcEE-EECC-------chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc
Confidence 3566 8888 799999955444333333455569988888776654 23899999999999888887655
Q ss_pred HHHhCCCccEEEEccccc
Q psy4251 106 YQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 106 ~~~~~~~id~lI~nAg~~ 123 (292)
. |+||+++...
T Consensus 69 ~-------d~VIn~~p~~ 79 (389)
T COG1748 69 F-------DLVINAAPPF 79 (389)
T ss_pred C-------CEEEEeCCch
Confidence 3 9999988743
No 308
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.17 E-value=0.00072 Score=61.57 Aligned_cols=75 Identities=15% Similarity=0.113 Sum_probs=50.7
Q ss_pred EcCCCCCCCCcccchhhHHHHHHHHhhc-CcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHHHh
Q psy4251 31 CTGDMEFYPRYTGLKKKDGNLCFDLVQS-SKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKK 109 (292)
Q Consensus 31 ItGa~~~~~~~~GiG~~~a~~~~~l~~~-g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~ 109 (292)
|-|+ +.+|..+++.+.+.... ...|..|+.+++++..+++ ...++..+++|+.|.+++.+++++
T Consensus 3 vlG~-------G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~~---- 67 (386)
T PF03435_consen 3 VLGA-------GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLRG---- 67 (386)
T ss_dssp EE---------SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHTT----
T ss_pred EEcC-------cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHhc----
Confidence 7777 68999995554433222 2345569999999888776 256999999999999998877544
Q ss_pred CCCccEEEEccccc
Q psy4251 110 FRSLNILVLNAGVF 123 (292)
Q Consensus 110 ~~~id~lI~nAg~~ 123 (292)
-|+|||++|..
T Consensus 68 ---~dvVin~~gp~ 78 (386)
T PF03435_consen 68 ---CDVVINCAGPF 78 (386)
T ss_dssp ---SSEEEE-SSGG
T ss_pred ---CCEEEECCccc
Confidence 49999999865
No 309
>KOG2865|consensus
Probab=97.17 E-value=0.0043 Score=52.90 Aligned_cols=122 Identities=15% Similarity=0.028 Sum_probs=80.5
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+.+|-++- |-||| +=+|+-+ +.+|+..|..|+. |..+. -..+++-...=+++.++..|+.|++||
T Consensus 58 S~sGiVaT-VFGAt------GFlGryv---vnklak~GSQviiPyR~d~~---~~r~lkvmGdLGQvl~~~fd~~DedSI 124 (391)
T KOG2865|consen 58 SVSGIVAT-VFGAT------GFLGRYV---VNKLAKMGSQVIIPYRGDEY---DPRHLKVMGDLGQVLFMKFDLRDEDSI 124 (391)
T ss_pred cccceEEE-Eeccc------ccccHHH---HHHHhhcCCeEEEeccCCcc---chhheeecccccceeeeccCCCCHHHH
Confidence 35566677 88999 8888888 7888899988886 43221 111222221135899999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+++++. -++|||-.|.-......+- -++|+.+.-.+.+.+. +..- -|+|.+|+..+.
T Consensus 125 r~vvk~-------sNVVINLIGrd~eTknf~f------~Dvn~~~aerlArick----e~GV--erfIhvS~Lgan 181 (391)
T KOG2865|consen 125 RAVVKH-------SNVVINLIGRDYETKNFSF------EDVNVHIAERLARICK----EAGV--ERFIHVSCLGAN 181 (391)
T ss_pred HHHHHh-------CcEEEEeeccccccCCccc------ccccchHHHHHHHHHH----hhCh--hheeehhhcccc
Confidence 998655 4899998886433222222 2456666655555443 3333 699999987644
No 310
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.00 E-value=0.031 Score=44.74 Aligned_cols=155 Identities=12% Similarity=-0.042 Sum_probs=93.1
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
.+- |.||| +-.|..+ +.+...+|+.|. +||..+.... ..+..++.|+-|++++.+.
T Consensus 2 KIa-iIgAs------G~~Gs~i---~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~-- 59 (211)
T COG2910 2 KIA-IIGAS------GKAGSRI---LKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASD-- 59 (211)
T ss_pred eEE-EEecC------chhHHHH---HHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhh--
Confidence 355 78999 7777777 777889998886 5998775431 2567889999999887443
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCCCC
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTI 184 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~ 184 (292)
+ -..|+||..-|...+ +..+. +..-++++...++.+.. .|+++|+..++-.-... ..
T Consensus 60 -l----~g~DaVIsA~~~~~~------~~~~~--------~~k~~~~li~~l~~agv--~RllVVGGAGSL~id~g--~r 116 (211)
T COG2910 60 -L----AGHDAVISAFGAGAS------DNDEL--------HSKSIEALIEALKGAGV--PRLLVVGGAGSLEIDEG--TR 116 (211)
T ss_pred -h----cCCceEEEeccCCCC------ChhHH--------HHHHHHHHHHHHhhcCC--eeEEEEcCccceEEcCC--ce
Confidence 3 357999998776521 11111 11225667777776566 89999988765433211 00
Q ss_pred CccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 185 SKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
-.|.... +..-|..++...+ +.+.|..+ ..+.-+-|+|...-
T Consensus 117 LvD~p~f-------P~ey~~~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f 158 (211)
T COG2910 117 LVDTPDF-------PAEYKPEALAQAE-FLDSLRAE---KSLDWTFVSPAAFF 158 (211)
T ss_pred eecCCCC-------chhHHHHHHHHHH-HHHHHhhc---cCcceEEeCcHHhc
Confidence 0111111 2333444444433 33334433 23777888888666
No 311
>KOG1372|consensus
Probab=96.95 E-value=0.003 Score=52.67 Aligned_cols=185 Identities=11% Similarity=0.050 Sum_probs=104.4
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE---EcCHHHHHHHHHHHHh---hCCCCceEEEEccCCC
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY---QNCWDKANDAISKILT---EKPSAQCIAMELDLCR 95 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~---~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dls~ 95 (292)
..+.|.+.||||-+ +.=|.-+|+. |...|+.|- -|+..--..-+++|-. .+.++.....-.|++|
T Consensus 24 ~~r~rkvALITGIt------GQDGSYLaEf---LL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTD 94 (376)
T KOG1372|consen 24 AFRPRKVALITGIT------GQDGSYLAEF---LLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTD 94 (376)
T ss_pred CcccceEEEEeccc------CCCchHHHHH---HHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccc
Confidence 34555444499999 8888888444 557777664 2443333333344421 1225678888899999
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
..++.+++..+ +++-+.|-|+-.+- ..+-|--+-+-+|...|+..++.+....-..+. -|+--.|++. .
T Consensus 95 ss~L~k~I~~i-----kPtEiYnLaAQSHV--kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~---VrfYQAstSE-l 163 (376)
T KOG1372|consen 95 SSCLIKLISTI-----KPTEVYNLAAQSHV--KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK---VRFYQASTSE-L 163 (376)
T ss_pred hHHHHHHHhcc-----Cchhhhhhhhhcce--EEEeecccceeeccchhhhhHHHHHHhcCcccc---eeEEecccHh-h
Confidence 99999998888 35666666664431 112222234556677888888877755433221 3444444432 2
Q ss_pred cccCCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHh---cCCCeEEEEecC
Q psy4251 176 YSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLW---YKYKIALSSRHC 233 (292)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~---~~~gi~v~~v~P 233 (292)
.+..+. ....+..+|-+...|+++|....-.+-.+...+ +-.||-+|.=.|
T Consensus 164 yGkv~e-------~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP 217 (376)
T KOG1372|consen 164 YGKVQE-------IPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP 217 (376)
T ss_pred cccccC-------CCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence 221100 001123345577889999987554433333333 334676666665
No 312
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.88 E-value=0.032 Score=47.72 Aligned_cols=71 Identities=15% Similarity=0.049 Sum_probs=53.9
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
.++ ||||| +.+|..+ +.+|...|+.|. .|+.+++.... ..+.+...|+.++.++...+
T Consensus 2 ~il-V~Gat------G~~G~~~---~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~- 61 (275)
T COG0702 2 KIL-VTGAT------GFVGGAV---VRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGA- 61 (275)
T ss_pred eEE-EEecc------cchHHHH---HHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHh-
Confidence 355 99999 9999999 666777787775 48887766544 36888899999998877663
Q ss_pred HHHHhCCCccEEEEccccc
Q psy4251 105 EYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~ 123 (292)
..+|.+++..+..
T Consensus 62 ------~G~~~~~~i~~~~ 74 (275)
T COG0702 62 ------KGVDGVLLISGLL 74 (275)
T ss_pred ------ccccEEEEEeccc
Confidence 3468887777754
No 313
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.82 E-value=0.0047 Score=57.38 Aligned_cols=75 Identities=11% Similarity=0.002 Sum_probs=52.0
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cC-HHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NC-WDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++++|+++ |+|++ ++|.++ +..|++.|+.|.+ ++ .+..++..+++... .+.++..|..+
T Consensus 2 ~~~~k~v~-iiG~g-------~~G~~~---A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~--- 63 (450)
T PRK14106 2 ELKGKKVL-VVGAG-------VSGLAL---AKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPE--- 63 (450)
T ss_pred CcCCCEEE-EECCC-------HHHHHH---HHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcch---
Confidence 57889999 99995 599999 6667788888875 33 23444444555432 35577788876
Q ss_pred HHHHHHHHHHhCCCccEEEEccccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
+..+.+|+||+++|+.
T Consensus 64 ---------~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 64 ---------EFLEGVDLVVVSPGVP 79 (450)
T ss_pred ---------hHhhcCCEEEECCCCC
Confidence 1125689999999974
No 314
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.64 E-value=0.0049 Score=54.74 Aligned_cols=76 Identities=8% Similarity=-0.003 Sum_probs=49.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHH-hhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDL-VQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l-~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
.++++|+++ ||||+ +.||..+++++.+. .....+++.|+.+++++..+++.. .|+. ++
T Consensus 151 ~~l~~k~VL-VtGAt------G~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----------~~i~---~l 209 (340)
T PRK14982 151 IDLSKATVA-VVGAT------GDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----------GKIL---SL 209 (340)
T ss_pred cCcCCCEEE-EEccC------hHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----------ccHH---hH
Confidence 478999999 99999 99999996665432 112344556888887776655421 1222 11
Q ss_pred HHHHHHHHHhCCCccEEEEcccccC
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVFG 124 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~~ 124 (292)
. +.....|++|+.++...
T Consensus 210 ~-------~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 210 E-------EALPEADIVVWVASMPK 227 (340)
T ss_pred H-------HHHccCCEEEECCcCCc
Confidence 1 22345899999998753
No 315
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=96.62 E-value=0.021 Score=63.08 Aligned_cols=183 Identities=10% Similarity=-0.012 Sum_probs=108.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE-cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ-NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.+.|+.++ |++.+ +|++.++ +.+|.++|..|.. +..+........+ +..+-.+.+.-.+.+++.
T Consensus 1752 ~~~~~~~~-v~~d~------~~~~~~L---~~~L~~~G~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 1816 (2582)
T TIGR02813 1752 KQSGANAL-VIDDD------GHNAGVL---AEKLIAAGWQVAVVRSPWVVSHSASPL-----ASAIASVTLGTIDDTSIE 1816 (2582)
T ss_pred cccCceeE-EEcCC------cchHHHH---HHHHHhCCCeEEEeecccccccccccc-----ccccccccccccchHHHH
Confidence 34577777 55545 7899888 7778889988764 4332111100001 122333455555678888
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCC-CCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFS-HTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYI 179 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~ 179 (292)
.+++.+.+..+.++.+||-.+......+ .+...+...-...+...|.+.+.+.+.+..... +.++.|+...+..+..
T Consensus 1817 ~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~--~~~~~vsr~~G~~g~~ 1894 (2582)
T TIGR02813 1817 AVIKDIEEKTAQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNAR--ASFVTVSRIDGGFGYS 1894 (2582)
T ss_pred HHHHhhhccccccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccCCC--eEEEEEEecCCccccC
Confidence 8888888877889999997765421110 011111122223345568888887776655444 7888888876655542
Q ss_pred CCCCCCccccCcCCCCCChhh--hHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCC
Q psy4251 180 TKDTISKSVLSVENYSDFWAM--TAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCC 234 (292)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG 234 (292)
. .....+. ..-....+++.+|+|++++|++..-+|...+.|.
T Consensus 1895 ~-------------~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1895 N-------------GDADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred C-------------ccccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence 1 0000000 0012346889999999999999877777777775
No 316
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.40 E-value=0.013 Score=51.11 Aligned_cols=53 Identities=9% Similarity=-0.018 Sum_probs=39.0
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCC
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKP 82 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~ 82 (292)
++++++++ |.|+ +|.|++++..+..+....+.|+.|+.+++++.++++.+..+
T Consensus 124 ~~~~k~vl-IlGa-------GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~ 176 (284)
T PRK12549 124 DASLERVV-QLGA-------GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFP 176 (284)
T ss_pred CccCCEEE-EECC-------cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCC
Confidence 46788899 9999 79999995554444333344556999999999998876543
No 317
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.32 E-value=0.012 Score=50.97 Aligned_cols=80 Identities=10% Similarity=0.043 Sum_probs=52.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.+..|++++ |.|| +|.+++++..+++++.....|+.|+.++++++++.+.+... .+ ...++.+.+...
T Consensus 122 ~~~~~~~vl-ilGA-------GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~--~~--~~~~~~~~~~~~ 189 (283)
T COG0169 122 VDVTGKRVL-ILGA-------GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA--AV--EAAALADLEGLE 189 (283)
T ss_pred cccCCCEEE-EECC-------cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc--cc--cccccccccccc
Confidence 556789999 9999 79999994444433333355667999999999998876532 11 112232222221
Q ss_pred HHHHHHHHhCCCccEEEEccccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
..|++||+-...
T Consensus 190 -----------~~dliINaTp~G 201 (283)
T COG0169 190 -----------EADLLINATPVG 201 (283)
T ss_pred -----------ccCEEEECCCCC
Confidence 479999987654
No 318
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.20 E-value=0.069 Score=45.94 Aligned_cols=84 Identities=10% Similarity=0.099 Sum_probs=54.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC---cEEEEcC-------------------HHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS---KLFYQNC-------------------WDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g---~~v~~r~-------------------~~~~~~~~~~l~ 78 (292)
..|++.+++ |-|+ +|+|..+|+. |+..| .+|+..+ ..|.+.+.+.+.
T Consensus 26 ~kL~~s~Vl-VvG~-------GGVGs~vae~---Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~ 94 (268)
T PRK15116 26 QLFADAHIC-VVGI-------GGVGSWAAEA---LARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIR 94 (268)
T ss_pred HHhcCCCEE-EECc-------CHHHHHHHHH---HHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHH
Confidence 447788888 8888 7999999554 55554 3443221 346677788888
Q ss_pred hhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccc
Q psy4251 79 TEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 79 ~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~ 122 (292)
+.+|..++..++--+ +.+.+..++ ....|+||.+.+.
T Consensus 95 ~INP~~~V~~i~~~i-~~e~~~~ll------~~~~D~VIdaiD~ 131 (268)
T PRK15116 95 QINPECRVTVVDDFI-TPDNVAEYM------SAGFSYVIDAIDS 131 (268)
T ss_pred hHCCCcEEEEEeccc-ChhhHHHHh------cCCCCEEEEcCCC
Confidence 888877777764323 344444442 1358888887663
No 319
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.19 E-value=0.019 Score=44.89 Aligned_cols=77 Identities=10% Similarity=0.128 Sum_probs=47.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
++++++++ |+|+ +++|..+++.+.+.......++.|+.++.++..+++.... +..+.++.++.
T Consensus 16 ~~~~~~i~-iiG~-------G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-- 78 (155)
T cd01065 16 ELKGKKVL-ILGA-------GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDLEEL-- 78 (155)
T ss_pred CCCCCEEE-EECC-------cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecchhhc--
Confidence 35678888 8887 7999999555443321123344588888887777664320 22334443322
Q ss_pred HHHHHHHhCCCccEEEEccccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~ 123 (292)
....|+||++....
T Consensus 79 --------~~~~Dvvi~~~~~~ 92 (155)
T cd01065 79 --------LAEADLIINTTPVG 92 (155)
T ss_pred --------cccCCEEEeCcCCC
Confidence 24689999998764
No 320
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.15 E-value=0.018 Score=49.98 Aligned_cols=50 Identities=12% Similarity=0.035 Sum_probs=36.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~ 78 (292)
.++++++++ |+|+ +|+|+++++.+..+.-..+.|+.|+.++++++.+++.
T Consensus 119 ~~~~~k~vl-VlGa-------Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 119 VDLKGKRIL-ILGA-------GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CCCCCCEEE-EEcC-------cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 367889998 9997 7999999555443322334555699999988887775
No 321
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.12 E-value=0.022 Score=49.52 Aligned_cols=82 Identities=7% Similarity=-0.057 Sum_probs=49.8
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
++++|+++ |-|+ +|-|++++..+.+++.....|+.|+.++++++++++....+...+. ..|. .+...
T Consensus 124 ~~~~k~vl-ilGa-------GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~---~~~~~ 190 (283)
T PRK14027 124 NAKLDSVV-QVGA-------GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDA---RGIED 190 (283)
T ss_pred CcCCCeEE-EECC-------cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCH---hHHHH
Confidence 45688898 9998 7999999444443333334556699999999988876543221121 1222 22111
Q ss_pred HHHHHHHhCCCccEEEEccccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~ 123 (292)
.. ...|+|||+..+.
T Consensus 191 ~~-------~~~divINaTp~G 205 (283)
T PRK14027 191 VI-------AAADGVVNATPMG 205 (283)
T ss_pred HH-------hhcCEEEEcCCCC
Confidence 11 2479999986543
No 322
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.12 E-value=0.059 Score=45.35 Aligned_cols=85 Identities=11% Similarity=-0.029 Sum_probs=55.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhCC
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEKP 82 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~~ 82 (292)
.|++.+++ |.|. +|+|..+++.+.+.+-...+++..+ ..|.+.+.+++.+.+|
T Consensus 8 ~L~~~~Vl-VvG~-------GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP 79 (231)
T cd00755 8 KLRNAHVA-VVGL-------GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINP 79 (231)
T ss_pred HHhCCCEE-EECC-------CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCC
Confidence 35677888 8998 7999999555443322223333211 2477888899999988
Q ss_pred CCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 83 SAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 83 ~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
..++..+...++. +....++ ....|++|.+..
T Consensus 80 ~~~V~~~~~~i~~-~~~~~l~------~~~~D~VvdaiD 111 (231)
T cd00755 80 ECEVDAVEEFLTP-DNSEDLL------GGDPDFVVDAID 111 (231)
T ss_pred CcEEEEeeeecCH-hHHHHHh------cCCCCEEEEcCC
Confidence 8888888777663 3333332 135899888754
No 323
>PTZ00325 malate dehydrogenase; Provisional
Probab=96.09 E-value=0.031 Score=49.44 Aligned_cols=176 Identities=11% Similarity=-0.030 Sum_probs=91.5
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
++.+++. |+|++ +.+|..++..+... .....++.-|.++++..+.+|.+..+ .. ...+.+|+.+..+.
T Consensus 6 ~~~~KI~-IiGaa------G~VGs~~a~~l~~~-~~~~elvL~Di~~~~g~a~Dl~~~~~--~~--~v~~~td~~~~~~~ 73 (321)
T PTZ00325 6 LKMFKVA-VLGAA------GGIGQPLSLLLKQN-PHVSELSLYDIVGAPGVAADLSHIDT--PA--KVTGYADGELWEKA 73 (321)
T ss_pred CCCCEEE-EECCC------CHHHHHHHHHHhcC-CCCCEEEEEecCCCcccccchhhcCc--Cc--eEEEecCCCchHHH
Confidence 4566888 99998 89999995543211 22233433232344443445554422 22 23345554332111
Q ss_pred HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD 182 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~ 182 (292)
....|+||++||....+ .+.+...+..|+...-.+++. +.+... .++|+++|.-...-..-
T Consensus 74 -------l~gaDvVVitaG~~~~~----~~tR~dll~~N~~i~~~i~~~----i~~~~~--~~iviv~SNPvdv~~~~-- 134 (321)
T PTZ00325 74 -------LRGADLVLICAGVPRKP----GMTRDDLFNTNAPIVRDLVAA----VASSAP--KAIVGIVSNPVNSTVPI-- 134 (321)
T ss_pred -------hCCCCEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHH----HHHHCC--CeEEEEecCcHHHHHHH--
Confidence 24589999999975321 234566777777665555554 444454 67777777633221100
Q ss_pred CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
....+ .....+++...|+.+-+=-..|-..+++.+. +....|+ ++|-
T Consensus 135 --~~~~~--~~~sg~p~~~viG~g~LDs~R~r~~la~~l~---v~~~~V~-~~Vl 181 (321)
T PTZ00325 135 --AAETL--KKAGVYDPRKLFGVTTLDVVRARKFVAEALG---MNPYDVN-VPVV 181 (321)
T ss_pred --HHhhh--hhccCCChhheeechhHHHHHHHHHHHHHhC---cChhheE-EEEE
Confidence 00000 0122344566777763333355666777763 5555555 4444
No 324
>PLN00106 malate dehydrogenase
Probab=96.08 E-value=0.0073 Score=53.43 Aligned_cols=157 Identities=13% Similarity=0.021 Sum_probs=84.4
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC-cEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS-KLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g-~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
.+++. |||++ +.+|..++..+....... ..++..+. ++....+|.+..+ .. ...|+++.++..+
T Consensus 18 ~~KV~-IiGaa------G~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~--~~--~i~~~~~~~d~~~-- 82 (323)
T PLN00106 18 GFKVA-VLGAA------GGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINT--PA--QVRGFLGDDQLGD-- 82 (323)
T ss_pred CCEEE-EECCC------CHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCc--Cc--eEEEEeCCCCHHH--
Confidence 45788 99998 899999955433221111 33333433 2222334443321 11 1123333222222
Q ss_pred HHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc-----ccc
Q psy4251 104 EEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR-----YSY 178 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~-----~~~ 178 (292)
.+...|++|+.||....+ ...++..+..|+.....+.+ .+.+..+ .+||++.|.-.. +..
T Consensus 83 -----~l~~aDiVVitAG~~~~~----g~~R~dll~~N~~i~~~i~~----~i~~~~p--~aivivvSNPvD~~~~i~t~ 147 (323)
T PLN00106 83 -----ALKGADLVIIPAGVPRKP----GMTRDDLFNINAGIVKTLCE----AVAKHCP--NALVNIISNPVNSTVPIAAE 147 (323)
T ss_pred -----HcCCCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHH----HHHHHCC--CeEEEEeCCCccccHHHHHH
Confidence 235689999999985332 23466677777766554444 4444444 455555554332 211
Q ss_pred CCCCCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc
Q psy4251 179 ITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY 222 (292)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~ 222 (292)
. ......+++...|+.++.-...|...+|+++.
T Consensus 148 ~-----------~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 148 V-----------LKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred H-----------HHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence 0 00122344567788888777788888998885
No 325
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.05 E-value=0.027 Score=46.45 Aligned_cols=82 Identities=10% Similarity=0.138 Sum_probs=56.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEcC-------------------HHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQNC-------------------WDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r~-------------------~~~~~~~~~~l~ 78 (292)
..|++++++ |.|+ +|+|.++++. |+..|+ +++..+ ..|++.+.++++
T Consensus 17 ~kl~~~~Vl-viG~-------GglGs~ia~~---La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~ 85 (202)
T TIGR02356 17 QRLLNSHVL-IIGA-------GGLGSPAALY---LAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLR 85 (202)
T ss_pred HHhcCCCEE-EECC-------CHHHHHHHHH---HHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHH
Confidence 457788899 8998 7999999555 445553 444333 357888889999
Q ss_pred hhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 79 TEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 79 ~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+.+|..++..+..++.+ +.+.++ +...|++|.+..
T Consensus 86 ~~np~v~i~~~~~~i~~-~~~~~~-------~~~~D~Vi~~~d 120 (202)
T TIGR02356 86 ELNSDIQVTALKERVTA-ENLELL-------INNVDLVLDCTD 120 (202)
T ss_pred HhCCCCEEEEehhcCCH-HHHHHH-------HhCCCEEEECCC
Confidence 98888888887777754 333222 235799988754
No 326
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.00 E-value=0.027 Score=50.28 Aligned_cols=82 Identities=10% Similarity=0.128 Sum_probs=57.8
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEcC---------------------HHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQNC---------------------WDKANDAISK 76 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r~---------------------~~~~~~~~~~ 76 (292)
..|++++++ |.|+ +|+|..+ +..|+..|+ .|+.++ ..|++.+.++
T Consensus 20 ~~L~~~~Vl-IiG~-------GglGs~v---a~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~ 88 (338)
T PRK12475 20 RKIREKHVL-IVGA-------GALGAAN---AEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEH 88 (338)
T ss_pred HhhcCCcEE-EECC-------CHHHHHH---HHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHH
Confidence 457888998 9998 7999999 455555553 333343 2377888899
Q ss_pred HHhhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 77 ILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 77 l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+++.+|..++..+..|++. +.++++ ....|++|.+..
T Consensus 89 l~~inp~v~i~~~~~~~~~-~~~~~~-------~~~~DlVid~~D 125 (338)
T PRK12475 89 LRKINSEVEIVPVVTDVTV-EELEEL-------VKEVDLIIDATD 125 (338)
T ss_pred HHHHCCCcEEEEEeccCCH-HHHHHH-------hcCCCEEEEcCC
Confidence 9999888899999888863 334333 235788888654
No 327
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.96 E-value=0.023 Score=49.46 Aligned_cols=80 Identities=11% Similarity=-0.027 Sum_probs=50.4
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
+++|++++ |-|+ +|.|++++..+.+++...+.|+.|+.++++++++++... ..+. . +...++..
T Consensus 122 ~~~~k~vl-vlGa-------GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~~--~--~~~~~~~~- 185 (282)
T TIGR01809 122 PLAGFRGL-VIGA-------GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVIT--R--LEGDSGGL- 185 (282)
T ss_pred ccCCceEE-EEcC-------cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Ccce--e--ccchhhhh-
Confidence 46788898 8888 799999966555444444566679999999988876432 1111 1 11111211
Q ss_pred HHHHHHHhCCCccEEEEccccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~ 123 (292)
......|+|||+....
T Consensus 186 ------~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 186 ------AIEKAAEVLVSTVPAD 201 (282)
T ss_pred ------hcccCCCEEEECCCCC
Confidence 1124589999987664
No 328
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.93 E-value=0.033 Score=46.80 Aligned_cols=85 Identities=11% Similarity=0.096 Sum_probs=57.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE----------c---------CHHHHHHHHHHHHhhC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ----------N---------CWDKANDAISKILTEK 81 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~----------r---------~~~~~~~~~~~l~~~~ 81 (292)
..|.+++++ |.|+ +|+|.++++.+...+-...+++. | ...|++.+.+++++.+
T Consensus 17 ~~L~~~~Vl-ivG~-------GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 88 (228)
T cd00757 17 EKLKNARVL-VVGA-------GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAIN 88 (228)
T ss_pred HHHhCCcEE-EECC-------CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhC
Confidence 346778888 9998 79999995554433322233331 1 1457888899999998
Q ss_pred CCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 82 PSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 82 ~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
|..++..+..+++. +.+.+++ ...|++|.+..
T Consensus 89 p~~~i~~~~~~i~~-~~~~~~~-------~~~DvVi~~~d 120 (228)
T cd00757 89 PDVEIEAYNERLDA-ENAEELI-------AGYDLVLDCTD 120 (228)
T ss_pred CCCEEEEecceeCH-HHHHHHH-------hCCCEEEEcCC
Confidence 88888888877743 3333332 35899998766
No 329
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.79 E-value=0.045 Score=41.91 Aligned_cols=81 Identities=10% Similarity=0.098 Sum_probs=56.2
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhCCCCc
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEKPSAQ 85 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~~~~~ 85 (292)
.++++ |-|+ +|+|.++++.+...+-...+++..+ ..|++.+.+.+.+.+|..+
T Consensus 2 ~~~v~-iiG~-------G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~ 73 (135)
T PF00899_consen 2 NKRVL-IIGA-------GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVE 73 (135)
T ss_dssp T-EEE-EEST-------SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSE
T ss_pred CCEEE-EECc-------CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCcee
Confidence 35677 8898 7999999666554433334454321 4578889999999999999
Q ss_pred eEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 86 CIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 86 ~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+..+..+++ .+...+++ ...|++|.+..
T Consensus 74 v~~~~~~~~-~~~~~~~~-------~~~d~vi~~~d 101 (135)
T PF00899_consen 74 VEAIPEKID-EENIEELL-------KDYDIVIDCVD 101 (135)
T ss_dssp EEEEESHCS-HHHHHHHH-------HTSSEEEEESS
T ss_pred eeeeecccc-cccccccc-------cCCCEEEEecC
Confidence 999999983 34444444 24699998754
No 330
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=95.71 E-value=0.18 Score=43.95 Aligned_cols=78 Identities=6% Similarity=0.013 Sum_probs=46.2
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|++++ |+|++ +++|.++++.+.. .|..|+ .++.++.+.+ .++ +... .+|..+.+..+.
T Consensus 144 ~g~~vl-I~g~~------~~~g~~~~~~a~~---~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~ 204 (325)
T cd08253 144 AGETVL-VHGGS------GAVGHAAVQLARW---AGARVIATASSAEGAELV-RQA-----GADA---VFNYRAEDLADR 204 (325)
T ss_pred CCCEEE-EEcCC------chHHHHHHHHHHH---cCCEEEEEeCCHHHHHHH-HHc-----CCCE---EEeCCCcCHHHH
Confidence 478888 99999 9999999665544 455555 3666554443 222 2221 245555444444
Q ss_pred HHHHHHHhCCCccEEEEcccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~ 122 (292)
+.+... ...+|++++++|.
T Consensus 205 ~~~~~~--~~~~d~vi~~~~~ 223 (325)
T cd08253 205 ILAATA--GQGVDVIIEVLAN 223 (325)
T ss_pred HHHHcC--CCceEEEEECCch
Confidence 433221 1369999999873
No 331
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=95.61 E-value=0.078 Score=45.86 Aligned_cols=105 Identities=13% Similarity=0.041 Sum_probs=69.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|.|++ |++|+ ++.|......++ ..|++|++ .+.+|..=+.+++- -+.+. |-... +
T Consensus 150 ~Getvv-VSaAa------GaVGsvvgQiAK---lkG~rVVGiaGg~eK~~~l~~~lG----fD~~i----dyk~~----d 207 (340)
T COG2130 150 AGETVV-VSAAA------GAVGSVVGQIAK---LKGCRVVGIAGGAEKCDFLTEELG----FDAGI----DYKAE----D 207 (340)
T ss_pred CCCEEE-EEecc------cccchHHHHHHH---hhCCeEEEecCCHHHHHHHHHhcC----Cceee----ecCcc----c
Confidence 489999 99999 999988865544 56777775 66777655554441 11222 22222 5
Q ss_pred HHHHHHHhCC-CccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccccccc
Q psy4251 102 FAEEYQKKFR-SLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSY 178 (292)
Q Consensus 102 ~~~~~~~~~~-~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~ 178 (292)
+.+.+++..+ .||+.+-|.|-. +..+.+++|+.. +||+.++-++++...
T Consensus 208 ~~~~L~~a~P~GIDvyfeNVGg~------------------------v~DAv~~~ln~~----aRi~~CG~IS~YN~~ 257 (340)
T COG2130 208 FAQALKEACPKGIDVYFENVGGE------------------------VLDAVLPLLNLF----ARIPVCGAISQYNAP 257 (340)
T ss_pred HHHHHHHHCCCCeEEEEEcCCch------------------------HHHHHHHhhccc----cceeeeeehhhcCCC
Confidence 5555655555 699999999842 345666777643 899999988877543
No 332
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=95.58 E-value=0.25 Score=43.46 Aligned_cols=78 Identities=18% Similarity=0.190 Sum_probs=47.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|++++ |+|++ +++|.++++.+. ..|..++ .++.++.+.+ .+ . +.. ...|..+.+..+.
T Consensus 166 ~~~~vl-I~g~~------~~iG~~~~~~~~---~~g~~v~~~~~~~~~~~~~-~~---~--~~~---~~~~~~~~~~~~~ 226 (342)
T cd08266 166 PGETVL-VHGAG------SGVGSAAIQIAK---LFGATVIATAGSEDKLERA-KE---L--GAD---YVIDYRKEDFVRE 226 (342)
T ss_pred CCCEEE-EECCC------chHHHHHHHHHH---HcCCEEEEEeCCHHHHHHH-HH---c--CCC---eEEecCChHHHHH
Confidence 467888 99999 999999966544 4455554 4666554433 21 1 221 1246666555555
Q ss_pred HHHHHHHhCCCccEEEEcccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~ 122 (292)
+.+.... ..+|++++++|.
T Consensus 227 ~~~~~~~--~~~d~~i~~~g~ 245 (342)
T cd08266 227 VRELTGK--RGVDVVVEHVGA 245 (342)
T ss_pred HHHHhCC--CCCcEEEECCcH
Confidence 5443322 369999999883
No 333
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.51 E-value=0.079 Score=45.76 Aligned_cols=73 Identities=10% Similarity=0.117 Sum_probs=47.4
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEE--EEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLF--YQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v--~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.++|+++ |+|+ +|+|++++.. +...|..| +.|+.+++++..+++... + .+.....| +
T Consensus 115 ~~~k~vl-iiGa-------Gg~g~aia~~---L~~~g~~v~v~~R~~~~~~~la~~~~~~--~-~~~~~~~~-----~-- 173 (270)
T TIGR00507 115 RPNQRVL-IIGA-------GGAARAVALP---LLKADCNVIIANRTVSKAEELAERFQRY--G-EIQAFSMD-----E-- 173 (270)
T ss_pred ccCCEEE-EEcC-------cHHHHHHHHH---HHHCCCEEEEEeCCHHHHHHHHHHHhhc--C-ceEEechh-----h--
Confidence 4678888 9998 7999999555 44555444 458888888888877542 1 22222211 1
Q ss_pred HHHHHHHHhCCCccEEEEccccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
. .....|+||++.+..
T Consensus 174 -~------~~~~~DivInatp~g 189 (270)
T TIGR00507 174 -L------PLHRVDLIINATSAG 189 (270)
T ss_pred -h------cccCccEEEECCCCC
Confidence 0 123589999998864
No 334
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=95.48 E-value=0.14 Score=45.53 Aligned_cols=77 Identities=13% Similarity=0.199 Sum_probs=46.4
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
|++++ |+||+ +|+|......+..++. ..+++..+.++.+ .+.++ +.... .|..+.+ +.+
T Consensus 143 g~~VL-V~gaa------GgVG~~aiQlAk~~G~-~~v~~~~s~~k~~-~~~~l-----GAd~v---i~y~~~~----~~~ 201 (326)
T COG0604 143 GETVL-VHGAA------GGVGSAAIQLAKALGA-TVVAVVSSSEKLE-LLKEL-----GADHV---INYREED----FVE 201 (326)
T ss_pred CCEEE-EecCC------chHHHHHHHHHHHcCC-cEEEEecCHHHHH-HHHhc-----CCCEE---EcCCccc----HHH
Confidence 88999 99999 9999999777665533 2333345555555 44433 22221 1222322 444
Q ss_pred HHHHhCC--CccEEEEcccc
Q psy4251 105 EYQKKFR--SLNILVLNAGV 122 (292)
Q Consensus 105 ~~~~~~~--~id~lI~nAg~ 122 (292)
++++..+ .+|+++...|.
T Consensus 202 ~v~~~t~g~gvDvv~D~vG~ 221 (326)
T COG0604 202 QVRELTGGKGVDVVLDTVGG 221 (326)
T ss_pred HHHHHcCCCCceEEEECCCH
Confidence 5544333 59999998884
No 335
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.44 E-value=0.052 Score=49.30 Aligned_cols=84 Identities=13% Similarity=0.119 Sum_probs=56.0
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhCC
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEKP 82 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~~ 82 (292)
.+.+++++ |.|+ +|+|..++..+...+-...+++.++ ..|++.+.+++++.+|
T Consensus 132 ~l~~~~Vl-vvG~-------GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np 203 (376)
T PRK08762 132 RLLEARVL-LIGA-------GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP 203 (376)
T ss_pred HHhcCcEE-EECC-------CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC
Confidence 46788888 7788 7999999555444433334444444 4578888889988888
Q ss_pred CCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 83 SAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 83 ~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
..++..+...+++ +.+.+++ ...|+||.+..
T Consensus 204 ~v~v~~~~~~~~~-~~~~~~~-------~~~D~Vv~~~d 234 (376)
T PRK08762 204 DVQVEAVQERVTS-DNVEALL-------QDVDVVVDGAD 234 (376)
T ss_pred CCEEEEEeccCCh-HHHHHHH-------hCCCEEEECCC
Confidence 7777777766653 2333322 24799998765
No 336
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=95.42 E-value=0.24 Score=46.61 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=62.4
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCCh---
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRL--- 96 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~--- 96 (292)
...|.+++ |.|+ +.+|...+..+..+ |+.|+ .++.++.+.+.+ + +.+.. ..|..+.
T Consensus 162 ~~pg~kVl-ViGa-------G~iGL~Ai~~Ak~l---GA~V~a~D~~~~rle~aes-l-----GA~~v--~i~~~e~~~~ 222 (509)
T PRK09424 162 KVPPAKVL-VIGA-------GVAGLAAIGAAGSL---GAIVRAFDTRPEVAEQVES-M-----GAEFL--ELDFEEEGGS 222 (509)
T ss_pred CcCCCEEE-EECC-------cHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHH-c-----CCeEE--Eecccccccc
Confidence 34588899 9999 79999996665544 44444 467766654432 3 33322 2232221
Q ss_pred ----------HHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEE
Q psy4251 97 ----------KSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARV 166 (292)
Q Consensus 97 ----------~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~i 166 (292)
+..+...+.+.+..+..|++|.++|..+... +..+++..+..|+ +. ++|
T Consensus 223 ~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~a-----------------P~lit~~~v~~mk--pG--gvI 281 (509)
T PRK09424 223 GDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPA-----------------PKLITAEMVASMK--PG--SVI 281 (509)
T ss_pred ccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccC-----------------cchHHHHHHHhcC--CC--CEE
Confidence 1111222222222346999999999753211 1223455566665 34 899
Q ss_pred EEEcCc
Q psy4251 167 VVVSSE 172 (292)
Q Consensus 167 V~vsS~ 172 (292)
|.++..
T Consensus 282 Vdvg~~ 287 (509)
T PRK09424 282 VDLAAE 287 (509)
T ss_pred EEEccC
Confidence 999874
No 337
>PRK05086 malate dehydrogenase; Provisional
Probab=95.36 E-value=0.039 Score=48.75 Aligned_cols=116 Identities=9% Similarity=0.003 Sum_probs=55.1
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
.++ |.||+ +++|.+++..+......+..++ .++. ..+...-++.+. .......-++-. ++ .+
T Consensus 2 KI~-IIGAs------G~VG~aia~~l~~~~~~~~el~L~d~~~-~~~g~alDl~~~--~~~~~i~~~~~~---d~---~~ 65 (312)
T PRK05086 2 KVA-VLGAA------GGIGQALALLLKTQLPAGSELSLYDIAP-VTPGVAVDLSHI--PTAVKIKGFSGE---DP---TP 65 (312)
T ss_pred EEE-EECCC------CHHHHHHHHHHHcCCCCccEEEEEecCC-CCcceehhhhcC--CCCceEEEeCCC---CH---HH
Confidence 466 89999 9999999665443223344443 3442 221111122221 101111111111 11 11
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
. ....|+||.++|....+. +.....+..|.-.. +.+.+.|.+..+ .++|.+.|.
T Consensus 66 ~----l~~~DiVIitaG~~~~~~----~~R~dll~~N~~i~----~~ii~~i~~~~~--~~ivivvsN 119 (312)
T PRK05086 66 A----LEGADVVLISAGVARKPG----MDRSDLFNVNAGIV----KNLVEKVAKTCP--KACIGIITN 119 (312)
T ss_pred H----cCCCCEEEEcCCCCCCCC----CCHHHHHHHHHHHH----HHHHHHHHHhCC--CeEEEEccC
Confidence 1 245899999999864322 12344566665444 444445544443 444444443
No 338
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.32 E-value=0.086 Score=44.86 Aligned_cols=85 Identities=8% Similarity=0.036 Sum_probs=56.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEK 81 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~ 81 (292)
..|+.++++ |.|+ +|+|..+++.+...+-...+|+..+ ..|++.+++++++.+
T Consensus 28 ~~L~~~~Vl-iiG~-------GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln 99 (245)
T PRK05690 28 EKLKAARVL-VVGL-------GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN 99 (245)
T ss_pred HHhcCCeEE-EECC-------CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC
Confidence 457888999 8898 7999999555433322223343221 357888889999998
Q ss_pred CCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 82 PSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 82 ~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
|..++..+...++. +.+.++ +...|++|.+..
T Consensus 100 p~v~i~~~~~~i~~-~~~~~~-------~~~~DiVi~~~D 131 (245)
T PRK05690 100 PHIAIETINARLDD-DELAAL-------IAGHDLVLDCTD 131 (245)
T ss_pred CCCEEEEEeccCCH-HHHHHH-------HhcCCEEEecCC
Confidence 88888888877753 233322 235799998764
No 339
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.31 E-value=0.07 Score=45.24 Aligned_cols=85 Identities=11% Similarity=0.041 Sum_probs=55.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEK 81 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~ 81 (292)
..|++.+++ |.|+ +|+|..++..+...+-...+++..+ ..|++.+.+++++.+
T Consensus 20 ~~L~~~~Vl-vvG~-------GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~in 91 (240)
T TIGR02355 20 EALKASRVL-IVGL-------GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQIN 91 (240)
T ss_pred HHHhCCcEE-EECc-------CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHC
Confidence 457788888 9999 7999999665444432223343222 347777888888888
Q ss_pred CCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 82 PSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 82 ~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
|..++..+...++. +.+.++ +...|++|.+..
T Consensus 92 p~v~i~~~~~~i~~-~~~~~~-------~~~~DlVvd~~D 123 (240)
T TIGR02355 92 PHIAINPINAKLDD-AELAAL-------IAEHDIVVDCTD 123 (240)
T ss_pred CCcEEEEEeccCCH-HHHHHH-------hhcCCEEEEcCC
Confidence 88788877666643 233333 235788888655
No 340
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.08 E-value=0.12 Score=45.16 Aligned_cols=84 Identities=18% Similarity=0.149 Sum_probs=47.8
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC---HHHHHHHHHHHHhhCCCCceEEEEccCCChH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC---WDKANDAISKILTEKPSAQCIAMELDLCRLK 97 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~ 97 (292)
.+++||+++ |-|+ +|-+++++..+..+......|+.|+ .++++++++++....+ ..+.+. ++ +
T Consensus 120 ~~~~~k~vl-vlGa-------GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~-~~~~~~--~~---~ 185 (288)
T PRK12749 120 FDIKGKTMV-LLGA-------GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD-CVVTVT--DL---A 185 (288)
T ss_pred CCcCCCEEE-EECC-------cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccC-ceEEEe--ch---h
Confidence 456889998 8998 6779998444333333345566688 4578887777754321 112221 22 1
Q ss_pred HHHHHHHHHHHhCCCccEEEEcccc
Q psy4251 98 SVKKFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 98 ~v~~~~~~~~~~~~~id~lI~nAg~ 122 (292)
+...+. +...+.|+|||+-.+
T Consensus 186 ~~~~l~----~~~~~aDivINaTp~ 206 (288)
T PRK12749 186 DQQAFA----EALASADILTNGTKV 206 (288)
T ss_pred hhhhhh----hhcccCCEEEECCCC
Confidence 111111 122468999997644
No 341
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.06 E-value=0.046 Score=50.15 Aligned_cols=78 Identities=13% Similarity=0.092 Sum_probs=49.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.++.|++++ |.|+ +|+|..+++.+...+.....|+.|+.++++++.+++. .. ..+ ..++.
T Consensus 177 ~~l~~kkvl-viGa-------G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~--~~~-----~~~~l- 236 (414)
T PRK13940 177 DNISSKNVL-IIGA-------GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NA--SAH-----YLSEL- 236 (414)
T ss_pred cCccCCEEE-EEcC-------cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CC--eEe-----cHHHH-
Confidence 357899999 9999 7999999666544333335555699888877776652 11 111 12222
Q ss_pred HHHHHHHHhCCCccEEEEcccccC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFG 124 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~ 124 (292)
.+....-|+||++.+...
T Consensus 237 ------~~~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 237 ------PQLIKKADIIIAAVNVLE 254 (414)
T ss_pred ------HHHhccCCEEEECcCCCC
Confidence 222345799999988643
No 342
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.02 E-value=0.12 Score=46.58 Aligned_cols=84 Identities=12% Similarity=0.030 Sum_probs=56.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEK 81 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~ 81 (292)
..|++.+++ |.|+ +|+|..+++.+...+-...+++..+ ..|++.++++|++.+
T Consensus 24 ~~L~~~~Vl-ivG~-------GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n 95 (355)
T PRK05597 24 QSLFDAKVA-VIGA-------GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALN 95 (355)
T ss_pred HHHhCCeEE-EECC-------CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHC
Confidence 457788899 8999 7999999555443322234444332 368889999999999
Q ss_pred CCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcc
Q psy4251 82 PSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNA 120 (292)
Q Consensus 82 ~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nA 120 (292)
|..++..+..+++.. ...+++ ...|+||.+.
T Consensus 96 p~v~v~~~~~~i~~~-~~~~~~-------~~~DvVvd~~ 126 (355)
T PRK05597 96 PDVKVTVSVRRLTWS-NALDEL-------RDADVILDGS 126 (355)
T ss_pred CCcEEEEEEeecCHH-HHHHHH-------hCCCEEEECC
Confidence 988888887777642 222222 2357777654
No 343
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.95 E-value=0.13 Score=39.65 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=50.9
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEcC-------------------HHHHHHHHHHHHhhCCCCc
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQNC-------------------WDKANDAISKILTEKPSAQ 85 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r~-------------------~~~~~~~~~~l~~~~~~~~ 85 (292)
++ |.|+ +|+|.++ +..|+..|+ .++..+ ..|++.+++++++.+|..+
T Consensus 2 Vl-iiG~-------GglGs~i---a~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~ 70 (143)
T cd01483 2 VL-LVGL-------GGLGSEI---ALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVN 70 (143)
T ss_pred EE-EECC-------CHHHHHH---HHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcE
Confidence 45 7888 7999999 555555554 333211 3577888888988888888
Q ss_pred eEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 86 CIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 86 ~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+..+..++.+... ...+.+.|++|.+..
T Consensus 71 i~~~~~~~~~~~~--------~~~~~~~diVi~~~d 98 (143)
T cd01483 71 VTAVPEGISEDNL--------DDFLDGVDLVIDAID 98 (143)
T ss_pred EEEEeeecChhhH--------HHHhcCCCEEEECCC
Confidence 8888877765432 122356899998765
No 344
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=94.87 E-value=0.26 Score=43.76 Aligned_cols=76 Identities=11% Similarity=0.047 Sum_probs=43.5
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc-EEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-LFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
|.+++ |+|++ +|+|..++..+.. .|+ .|+ .++.++.+.+.+++ +.... .|-.+ ++..+
T Consensus 155 ~~~Vl-I~ga~------g~vG~~aiqlAk~---~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~v---i~~~~-~~~~~ 215 (345)
T cd08293 155 NQTMV-VSGAA------GACGSLAGQIGRL---LGCSRVVGICGSDEKCQLLKSEL-----GFDAA---INYKT-DNVAE 215 (345)
T ss_pred CCEEE-EECCC------cHHHHHHHHHHHH---cCCCEEEEEcCCHHHHHHHHHhc-----CCcEE---EECCC-CCHHH
Confidence 37888 99999 9999999665553 354 444 36666655544433 22221 12222 22223
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
.+.++.. +.+|+++.+.|
T Consensus 216 ~i~~~~~--~gvd~vid~~g 233 (345)
T cd08293 216 RLRELCP--EGVDVYFDNVG 233 (345)
T ss_pred HHHHHCC--CCceEEEECCC
Confidence 3333321 36999999877
No 345
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.83 E-value=0.16 Score=45.38 Aligned_cols=82 Identities=11% Similarity=0.133 Sum_probs=55.2
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEcC---------------------HHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQNC---------------------WDKANDAISK 76 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r~---------------------~~~~~~~~~~ 76 (292)
..|..++++ |.|+ +|+|..+| ..|+..|+ .++..+ ..|++.+.+.
T Consensus 20 ~~L~~~~Vl-VvG~-------GglGs~va---~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~ 88 (339)
T PRK07688 20 QKLREKHVL-IIGA-------GALGTANA---EMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKR 88 (339)
T ss_pred HHhcCCcEE-EECC-------CHHHHHHH---HHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHH
Confidence 457788888 9999 79999994 44555554 333333 1466777788
Q ss_pred HHhhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 77 ILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 77 l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+++..|..++..+..|++. +.+.++ +...|++|.+..
T Consensus 89 l~~inp~v~v~~~~~~~~~-~~~~~~-------~~~~DlVid~~D 125 (339)
T PRK07688 89 LEEINSDVRVEAIVQDVTA-EELEEL-------VTGVDLIIDATD 125 (339)
T ss_pred HHHHCCCcEEEEEeccCCH-HHHHHH-------HcCCCEEEEcCC
Confidence 8888887888888888863 333333 234688888643
No 346
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.69 E-value=0.055 Score=48.06 Aligned_cols=55 Identities=18% Similarity=0.108 Sum_probs=32.9
Q ss_pred CCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 111 RSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 111 ~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
...|+||++||...... +.-+..+..|+ .+++.+.+.+.+..++.+.++++|...
T Consensus 77 ~~aDiVI~tAG~~~~~~----~~R~~l~~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPv 131 (325)
T cd01336 77 KDVDVAILVGAMPRKEG----MERKDLLKANV----KIFKEQGEALDKYAKKNVKVLVVGNPA 131 (325)
T ss_pred CCCCEEEEeCCcCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEecCcH
Confidence 46899999999864321 12244555554 455666666655521127888888753
No 347
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.68 E-value=0.17 Score=41.62 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=51.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEcC------------------HHHHHHHHHHHHh
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQNC------------------WDKANDAISKILT 79 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r~------------------~~~~~~~~~~l~~ 79 (292)
..|..++++ |.|+ +|+|..+ +..|+..|+ +++..+ ..|.+.+.+.+.+
T Consensus 17 ~~L~~~~V~-IvG~-------GglGs~i---a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~ 85 (200)
T TIGR02354 17 QKLEQATVA-ICGL-------GGLGSNV---AINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISE 85 (200)
T ss_pred HHHhCCcEE-EECc-------CHHHHHH---HHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHH
Confidence 446778888 9999 7999999 444556664 222222 2456666777777
Q ss_pred hCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEc
Q psy4251 80 EKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLN 119 (292)
Q Consensus 80 ~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~n 119 (292)
..|..++..+..+++. +.+.++ +...|+||.+
T Consensus 86 inp~~~i~~~~~~i~~-~~~~~~-------~~~~DlVi~a 117 (200)
T TIGR02354 86 INPYTEIEAYDEKITE-ENIDKF-------FKDADIVCEA 117 (200)
T ss_pred HCCCCEEEEeeeeCCH-hHHHHH-------hcCCCEEEEC
Confidence 7777777777777753 322222 2457888876
No 348
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=94.62 E-value=0.15 Score=44.93 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=51.0
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhCCCCceEE
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEKPSAQCIA 88 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~ 88 (292)
++ |.|+ +|+|-++++.+...+-...+|+..+ ..|++.+++.+++..|..++..
T Consensus 2 Vl-IVGa-------GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~ 73 (312)
T cd01489 2 VL-VVGA-------GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVA 73 (312)
T ss_pred EE-EECC-------CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEE
Confidence 45 8888 7999999666443433334443221 4678888888988888888888
Q ss_pred EEccCCChHHHHHHHHHHHHhCCCccEEEEcc
Q psy4251 89 MELDLCRLKSVKKFAEEYQKKFRSLNILVLNA 120 (292)
Q Consensus 89 ~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nA 120 (292)
+..++++.....++ +...|+||.+.
T Consensus 74 ~~~~i~~~~~~~~f-------~~~~DvVv~a~ 98 (312)
T cd01489 74 YHANIKDPDFNVEF-------FKQFDLVFNAL 98 (312)
T ss_pred EeccCCCccchHHH-------HhcCCEEEECC
Confidence 88888764222222 23468877754
No 349
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=94.61 E-value=0.45 Score=44.79 Aligned_cols=115 Identities=11% Similarity=0.059 Sum_probs=63.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCC------
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLC------ 94 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls------ 94 (292)
....+.+++ |.|+ +.+|...+..+..++.. ..++.++.++.+.+.+ + + ..++..|..
T Consensus 160 g~vp~akVl-ViGa-------G~iGl~Aa~~ak~lGA~-V~v~d~~~~rle~a~~-l-----G--a~~v~v~~~e~g~~~ 222 (511)
T TIGR00561 160 GKVPPAKVL-VIGA-------GVAGLAAIGAANSLGAI-VRAFDTRPEVKEQVQS-M-----G--AEFLELDFKEEGGSG 222 (511)
T ss_pred CCCCCCEEE-EECC-------CHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHH-c-----C--CeEEecccccccccc
Confidence 344567888 8898 78999996655544322 3333466666443332 2 2 233444432
Q ss_pred -------ChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEE
Q psy4251 95 -------RLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVV 167 (292)
Q Consensus 95 -------~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV 167 (292)
+.+..+...+.+.+.....|++|+++-+.+... +.++++..+..|+. + +.||
T Consensus 223 ~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~a-----------------P~Lit~emv~~MKp--G--svIV 281 (511)
T TIGR00561 223 DGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPA-----------------PKLITEEMVDSMKA--G--SVIV 281 (511)
T ss_pred ccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCC-----------------CeeehHHHHhhCCC--C--CEEE
Confidence 123344444445555567999999995543111 12234444555653 3 7888
Q ss_pred EEcCcc
Q psy4251 168 VVSSES 173 (292)
Q Consensus 168 ~vsS~~ 173 (292)
-+++..
T Consensus 282 DlA~d~ 287 (511)
T TIGR00561 282 DLAAEQ 287 (511)
T ss_pred EeeeCC
Confidence 888763
No 350
>PRK08223 hypothetical protein; Validated
Probab=94.59 E-value=0.17 Score=43.83 Aligned_cols=81 Identities=11% Similarity=0.022 Sum_probs=54.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC---cEEEEcC-------------------HHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS---KLFYQNC-------------------WDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g---~~v~~r~-------------------~~~~~~~~~~l~ 78 (292)
..|++.+++ |.|+ +|+|-.++. .|+..| ..++..| ..|++.++++++
T Consensus 23 ~kL~~s~Vl-IvG~-------GGLGs~va~---~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~ 91 (287)
T PRK08223 23 QRLRNSRVA-IAGL-------GGVGGIHLL---TLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVR 91 (287)
T ss_pred HHHhcCCEE-EECC-------CHHHHHHHH---HHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHH
Confidence 447788888 9999 799999955 455554 3333221 357788888888
Q ss_pred hhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcc
Q psy4251 79 TEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNA 120 (292)
Q Consensus 79 ~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nA 120 (292)
+.+|..++..+...++.. .+.+++ ...|+||.+.
T Consensus 92 ~iNP~v~V~~~~~~l~~~-n~~~ll-------~~~DlVvD~~ 125 (287)
T PRK08223 92 DINPELEIRAFPEGIGKE-NADAFL-------DGVDVYVDGL 125 (287)
T ss_pred HHCCCCEEEEEecccCcc-CHHHHH-------hCCCEEEECC
Confidence 888888888888777643 333332 2468887543
No 351
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=94.58 E-value=0.25 Score=43.45 Aligned_cols=115 Identities=10% Similarity=0.015 Sum_probs=66.3
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC----cEEEEcCHHHHHHHHHHHHhhCC--CCceEEEEccCCChHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS----KLFYQNCWDKANDAISKILTEKP--SAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g----~~v~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~ 100 (292)
++. |.|+ +++|..+|.. ++..| ..++.++.++++....++.+... ........ .+.+.
T Consensus 2 kI~-IIGa-------G~vG~~~a~~---l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-- 65 (306)
T cd05291 2 KVV-IIGA-------GHVGSSFAYS---LVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-- 65 (306)
T ss_pred EEE-EECC-------CHHHHHHHHH---HHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH--
Confidence 456 7787 7999999554 54555 33445888888888888865431 11222221 22221
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+ ..-|++|+++|....+. +.....++.|. -+++...+.+.+..+ .+.|+++|.....
T Consensus 66 -----l----~~aDIVIitag~~~~~g----~~R~dll~~N~----~i~~~~~~~i~~~~~-~~~vivvsNP~d~ 122 (306)
T cd05291 66 -----C----KDADIVVITAGAPQKPG----ETRLDLLEKNA----KIMKSIVPKIKASGF-DGIFLVASNPVDV 122 (306)
T ss_pred -----h----CCCCEEEEccCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHhCC-CeEEEEecChHHH
Confidence 1 35899999999853322 12233444443 445555555554432 2888888876443
No 352
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=94.56 E-value=0.2 Score=41.18 Aligned_cols=82 Identities=10% Similarity=0.169 Sum_probs=53.2
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC---cEEEEcC---------------------HHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS---KLFYQNC---------------------WDKANDAISK 76 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g---~~v~~r~---------------------~~~~~~~~~~ 76 (292)
..|+..+++ |.|+ +|+|-++++. |+..| .+++..+ ..|++.+.++
T Consensus 15 ~~L~~s~Vl-viG~-------gglGsevak~---L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~ 83 (198)
T cd01485 15 NKLRSAKVL-IIGA-------GALGAEIAKN---LVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEF 83 (198)
T ss_pred HHHhhCcEE-EECC-------CHHHHHHHHH---HHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHH
Confidence 346677888 8888 6899999554 44554 3343211 2367777888
Q ss_pred HHhhCCCCceEEEEccCCC-hHHHHHHHHHHHHhCCCccEEEEcc
Q psy4251 77 ILTEKPSAQCIAMELDLCR-LKSVKKFAEEYQKKFRSLNILVLNA 120 (292)
Q Consensus 77 l~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~~~~~id~lI~nA 120 (292)
+++..|..++..+..++.+ .+...++ +...|++|.+.
T Consensus 84 L~~lNp~v~i~~~~~~~~~~~~~~~~~-------~~~~dvVi~~~ 121 (198)
T cd01485 84 LQELNPNVKLSIVEEDSLSNDSNIEEY-------LQKFTLVIATE 121 (198)
T ss_pred HHHHCCCCEEEEEecccccchhhHHHH-------HhCCCEEEECC
Confidence 9888888888888777753 2222333 23578888763
No 353
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.55 E-value=0.21 Score=41.44 Aligned_cols=84 Identities=12% Similarity=0.061 Sum_probs=55.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC------------------HHHHHHHHHHHHhhCC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC------------------WDKANDAISKILTEKP 82 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~------------------~~~~~~~~~~l~~~~~ 82 (292)
..|+.++++ |.|+ +|+|..+++.+...+-....++..+ ..|++.+.+++.+..|
T Consensus 24 ~~L~~~~V~-ViG~-------GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp 95 (212)
T PRK08644 24 EKLKKAKVG-IAGA-------GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP 95 (212)
T ss_pred HHHhCCCEE-EECc-------CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCC
Confidence 447788888 9998 7999999655443322223343332 2577888888888888
Q ss_pred CCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcc
Q psy4251 83 SAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNA 120 (292)
Q Consensus 83 ~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nA 120 (292)
..++..+..++++ +.+.++ +...|++|.+.
T Consensus 96 ~v~v~~~~~~i~~-~~~~~~-------~~~~DvVI~a~ 125 (212)
T PRK08644 96 FVEIEAHNEKIDE-DNIEEL-------FKDCDIVVEAF 125 (212)
T ss_pred CCEEEEEeeecCH-HHHHHH-------HcCCCEEEECC
Confidence 8888888777765 233222 23579888874
No 354
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=94.50 E-value=0.28 Score=43.61 Aligned_cols=78 Identities=13% Similarity=0.101 Sum_probs=44.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|.+++ |+|++ +|+|..++..+.. .|+.|+ .++.++.+.+.+++ +... + .|-.+.++..+
T Consensus 151 ~g~~Vl-I~Ga~------G~vG~~aiqlAk~---~G~~Vi~~~~~~~~~~~~~~~l-----Ga~~-v--i~~~~~~~~~~ 212 (338)
T cd08295 151 KGETVF-VSAAS------GAVGQLVGQLAKL---KGCYVVGSAGSDEKVDLLKNKL-----GFDD-A--FNYKEEPDLDA 212 (338)
T ss_pred CCCEEE-EecCc------cHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHhc-----CCce-e--EEcCCcccHHH
Confidence 478888 99999 9999999666554 455554 46666655444323 2211 1 22222222333
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
.+.+... +.+|+++.+.|
T Consensus 213 ~i~~~~~--~gvd~v~d~~g 230 (338)
T cd08295 213 ALKRYFP--NGIDIYFDNVG 230 (338)
T ss_pred HHHHhCC--CCcEEEEECCC
Confidence 3333221 36999999877
No 355
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.48 E-value=0.06 Score=49.96 Aligned_cols=76 Identities=13% Similarity=0.030 Sum_probs=45.7
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC--HHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC--WDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
+++||+++ |||++ |+|.++ +..|.+.|+.|++.+ ........+++.+. + +.+...+ +...+
T Consensus 2 ~~~~k~v~-v~G~g-------~~G~s~---a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g--~~~~~~~--~~~~~ 64 (447)
T PRK02472 2 EYQNKKVL-VLGLA-------KSGYAA---AKLLHKLGANVTVNDGKPFSENPEAQELLEE--G--IKVICGS--HPLEL 64 (447)
T ss_pred CcCCCEEE-EEeeC-------HHHHHH---HHHHHHCCCEEEEEcCCCccchhHHHHHHhc--C--CEEEeCC--CCHHH
Confidence 46789998 99995 599999 555778888888633 22233334445433 2 2222211 11111
Q ss_pred HHHHHHHHHhCCCccEEEEccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
. . ..+|+||.++|+.
T Consensus 65 ---~----~--~~~d~vV~s~gi~ 79 (447)
T PRK02472 65 ---L----D--EDFDLMVKNPGIP 79 (447)
T ss_pred ---h----c--CcCCEEEECCCCC
Confidence 1 1 1489999999985
No 356
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.48 E-value=0.11 Score=46.16 Aligned_cols=154 Identities=12% Similarity=-0.031 Sum_probs=85.3
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---------EEEEc--CHHHHHHHHHHHHhhC-CC-CceEEEEcc
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---------LFYQN--CWDKANDAISKILTEK-PS-AQCIAMELD 92 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---------~v~~r--~~~~~~~~~~~l~~~~-~~-~~~~~~~~D 92 (292)
+++. |+|++ +.+|..+|. .+...+. .++.. +.++++..+.++.... +- .++.+ .
T Consensus 3 ~KV~-IiGa~------G~VG~~~a~---~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~-- 69 (322)
T cd01338 3 VRVA-VTGAA------GQIGYSLLF---RIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T-- 69 (322)
T ss_pred eEEE-EECCC------cHHHHHHHH---HHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--
Confidence 4677 99998 899999944 4444332 23333 2333455455554332 10 01111 1
Q ss_pred CCChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 93 LCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 93 ls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
-.+ .+....-|++|.+||....+. .+ ....+..| .-+++.+.+.+.+..++.+.|+++|..
T Consensus 70 ~~~-----------~~~~~daDivvitaG~~~k~g-~t---R~dll~~N----~~i~~~i~~~i~~~~~~~~iiivvsNP 130 (322)
T cd01338 70 DDP-----------NVAFKDADWALLVGAKPRGPG-ME---RADLLKAN----GKIFTAQGKALNDVASRDVKVLVVGNP 130 (322)
T ss_pred cCc-----------HHHhCCCCEEEEeCCCCCCCC-Cc---HHHHHHHH----HHHHHHHHHHHHhhCCCCeEEEEecCc
Confidence 011 122346799999999853322 22 23344444 445666666666544112888888765
Q ss_pred ccccccCCCCCCCccccCcCCCC-CChhhhHHHHhHHHHHHHHHHHHhHhc
Q psy4251 173 SHRYSYITKDTISKSVLSVENYS-DFWAMTAYNDTKLCNVLFGEKLATLWY 222 (292)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~~~~ 222 (292)
.-.+...- . ... .++....|+.+++--..|...+++.+.
T Consensus 131 vD~~t~~~----------~-k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg 170 (322)
T cd01338 131 CNTNALIA----------M-KNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG 170 (322)
T ss_pred HHHHHHHH----------H-HHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence 32222100 0 011 244677899999999999999999985
No 357
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=94.48 E-value=0.71 Score=35.62 Aligned_cols=115 Identities=15% Similarity=0.070 Sum_probs=66.3
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC--cEEEEcCHHHHHHHHHHHHhhCCCC--ceEEEEccCCChHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS--KLFYQNCWDKANDAISKILTEKPSA--QCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g--~~v~~r~~~~~~~~~~~l~~~~~~~--~~~~~~~Dls~~~~v~~~ 102 (292)
.+. |.|++ +.+|..+|..+... ... ..++.+++++++..+.++....... ...... .+.+.
T Consensus 2 KV~-IiGa~------G~VG~~~a~~l~~~-~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~---- 66 (141)
T PF00056_consen 2 KVA-IIGAA------GNVGSTLALLLAQQ-GLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA---- 66 (141)
T ss_dssp EEE-EESTT------SHHHHHHHHHHHHT-TTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG----
T ss_pred EEE-EECCC------ChHHHHHHHHHHhC-CCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc----
Confidence 355 88998 89999996654444 222 3445688888888888886543212 222222 33333
Q ss_pred HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
...-|++|.+||....+.+ .....++.|. .+++.+.+.+.+..+ .+.++.+|..
T Consensus 67 -------~~~aDivvitag~~~~~g~----sR~~ll~~N~----~i~~~~~~~i~~~~p-~~~vivvtNP 120 (141)
T PF00056_consen 67 -------LKDADIVVITAGVPRKPGM----SRLDLLEANA----KIVKEIAKKIAKYAP-DAIVIVVTNP 120 (141)
T ss_dssp -------GTTESEEEETTSTSSSTTS----SHHHHHHHHH----HHHHHHHHHHHHHST-TSEEEE-SSS
T ss_pred -------cccccEEEEeccccccccc----cHHHHHHHhH----hHHHHHHHHHHHhCC-ccEEEEeCCc
Confidence 2357999999998532221 2344445444 445555555554432 1777777664
No 358
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.45 E-value=0.14 Score=41.94 Aligned_cols=81 Identities=15% Similarity=0.227 Sum_probs=53.6
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEcC-------------------HHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQNC-------------------WDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r~-------------------~~~~~~~~~~l~ 78 (292)
+.|++++++ |-|+ +|+|-++++. |+..|+ +++..+ ..|++.++++++
T Consensus 17 ~~L~~s~Vl-IiG~-------gglG~evak~---La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~ 85 (197)
T cd01492 17 KRLRSARIL-LIGL-------KGLGAEIAKN---LVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLR 85 (197)
T ss_pred HHHHhCcEE-EEcC-------CHHHHHHHHH---HHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHH
Confidence 446778888 7788 6899999554 555553 343211 347888889999
Q ss_pred hhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 79 TEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 79 ~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+.+|..++..+...+++ ...++ +...|++|.+..
T Consensus 86 ~lNp~v~i~~~~~~~~~--~~~~~-------~~~~dvVi~~~~ 119 (197)
T cd01492 86 ALNPRVKVSVDTDDISE--KPEEF-------FSQFDVVVATEL 119 (197)
T ss_pred HHCCCCEEEEEecCccc--cHHHH-------HhCCCEEEECCC
Confidence 99888888887766652 11222 235799887643
No 359
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.38 E-value=0.18 Score=45.55 Aligned_cols=66 Identities=12% Similarity=0.071 Sum_probs=46.1
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEK 81 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~ 81 (292)
..|.+.+++ |.|+ +|+|..++..+...+-...+++..+ ..|++.+++++++.+
T Consensus 37 ~~l~~~~Vl-iiG~-------GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~n 108 (370)
T PRK05600 37 ERLHNARVL-VIGA-------GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ 108 (370)
T ss_pred HHhcCCcEE-EECC-------CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHC
Confidence 457788888 9999 7999999555433322223343222 468888899999998
Q ss_pred CCCceEEEEccCC
Q psy4251 82 PSAQCIAMELDLC 94 (292)
Q Consensus 82 ~~~~~~~~~~Dls 94 (292)
|..++..+...++
T Consensus 109 p~v~i~~~~~~i~ 121 (370)
T PRK05600 109 PDIRVNALRERLT 121 (370)
T ss_pred CCCeeEEeeeecC
Confidence 8878888776665
No 360
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=94.38 E-value=0.24 Score=41.74 Aligned_cols=80 Identities=10% Similarity=0.090 Sum_probs=51.5
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhCCCCceEE
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEKPSAQCIA 88 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~ 88 (292)
++ |.|+ +|+|-++++.+...+-...+|+..| ..|++.+++.+++..|..++..
T Consensus 2 Vl-vvG~-------GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~ 73 (234)
T cd01484 2 VL-LVGA-------GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVP 73 (234)
T ss_pred EE-EECC-------CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEE
Confidence 44 7788 7999999665443332234444322 4578888888888888888888
Q ss_pred EEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 89 MELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 89 ~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+..++++.++. -.++ +...|++|.+..
T Consensus 74 ~~~~i~~~~~~---~~~f---~~~~DvVi~a~D 100 (234)
T cd01484 74 YQNKVGPEQDF---NDTF---FEQFHIIVNALD 100 (234)
T ss_pred EeccCChhhhc---hHHH---HhCCCEEEECCC
Confidence 88888653321 1122 345798888643
No 361
>PRK08328 hypothetical protein; Provisional
Probab=94.36 E-value=0.24 Score=41.73 Aligned_cols=85 Identities=11% Similarity=0.010 Sum_probs=48.4
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------H-HHHHHHHHHHHhh
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------W-DKANDAISKILTE 80 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~-~~~~~~~~~l~~~ 80 (292)
..|++++++ |.|+ +|+|.++++.+...+-...+++..+ . .+.+.+.+++++.
T Consensus 23 ~~L~~~~Vl-IiG~-------GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~ 94 (231)
T PRK08328 23 EKLKKAKVA-VVGV-------GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF 94 (231)
T ss_pred HHHhCCcEE-EECC-------CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh
Confidence 457788888 9999 7999999555443322223344222 1 2344445566666
Q ss_pred CCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 81 KPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 81 ~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
.|..++..+...++ .+.+.+++ ...|++|.+..
T Consensus 95 np~v~v~~~~~~~~-~~~~~~~l-------~~~D~Vid~~d 127 (231)
T PRK08328 95 NSDIKIETFVGRLS-EENIDEVL-------KGVDVIVDCLD 127 (231)
T ss_pred CCCCEEEEEeccCC-HHHHHHHH-------hcCCEEEECCC
Confidence 66666666665553 23333322 24577776544
No 362
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.32 E-value=0.14 Score=45.38 Aligned_cols=58 Identities=19% Similarity=0.129 Sum_probs=34.5
Q ss_pred HhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 108 KKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 108 ~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
+.....|++|+.||....+. +.....+..| .-+++.+.+.+.+..++.+.++++|...
T Consensus 72 ~~~~~aDiVVitAG~~~~~g----~tR~dll~~N----~~i~~~i~~~i~~~~~~~~iiivvsNPv 129 (323)
T cd00704 72 EAFKDVDVAILVGAFPRKPG----MERADLLRKN----AKIFKEQGEALNKVAKPTVKVLVVGNPA 129 (323)
T ss_pred HHhCCCCEEEEeCCCCCCcC----CcHHHHHHHh----HHHHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence 33457899999999853322 2233344444 4566777777766521127788777543
No 363
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=94.18 E-value=0.13 Score=49.27 Aligned_cols=93 Identities=15% Similarity=0.115 Sum_probs=58.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC----------------------HHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC----------------------WDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~----------------------~~~~~~~~~~l~ 78 (292)
..|++.+++ |.|+ +|+|-.+|+.+...+-..++++..+ ..|++.+++.|+
T Consensus 334 ekL~~~kVL-IvGa-------GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk 405 (664)
T TIGR01381 334 ERYSQLKVL-LLGA-------GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALK 405 (664)
T ss_pred HHHhcCeEE-EECC-------cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHH
Confidence 446788888 9999 7999999666554433334444211 236777888999
Q ss_pred hhCCCCceEEEEccC-------CC--hHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 79 TEKPSAQCIAMELDL-------CR--LKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 79 ~~~~~~~~~~~~~Dl-------s~--~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+.+|..++..+...+ +. .+++.+=++.+.+.....|+|+.+.-
T Consensus 406 ~InP~v~i~~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~DvV~d~tD 457 (664)
T TIGR01381 406 RIFPSIQATGHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHDVVFLLLD 457 (664)
T ss_pred HHCCCcEEEEeeeeeccccccCCchhhhhccccHHHHHHHHhhCCEEEECCC
Confidence 999888888877664 22 12222222333333345688888654
No 364
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.15 E-value=0.056 Score=44.49 Aligned_cols=46 Identities=11% Similarity=-0.008 Sum_probs=33.9
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISK 76 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~ 76 (292)
..+++||+++ |.|. +.+|..+ +..|.+.|+.|++ ++.+++++..++
T Consensus 23 ~~~l~gk~v~-I~G~-------G~vG~~~---A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 23 TDSLEGKTVA-VQGL-------GKVGYKL---AEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCCEEE-EECC-------CHHHHHH---HHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 4678999999 9998 6899999 5556677877765 566665555443
No 365
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=94.10 E-value=0.39 Score=43.02 Aligned_cols=78 Identities=12% Similarity=0.067 Sum_probs=44.4
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|.+++ |+|++ +|+|..++..+.. .|+.|++ ++.++.+.+.+++ +.... .|-.+.++..+
T Consensus 158 ~g~~Vl-V~Gaa------G~vG~~aiqlAk~---~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~v---i~~~~~~~~~~ 219 (348)
T PLN03154 158 KGDSVF-VSAAS------GAVGQLVGQLAKL---HGCYVVGSAGSSQKVDLLKNKL-----GFDEA---FNYKEEPDLDA 219 (348)
T ss_pred CCCEEE-EecCc------cHHHHHHHHHHHH---cCCEEEEEcCCHHHHHHHHHhc-----CCCEE---EECCCcccHHH
Confidence 478888 99999 9999999665543 4555553 5666654443333 22221 12222222333
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
.+.+.. .+.+|+++.+.|
T Consensus 220 ~i~~~~--~~gvD~v~d~vG 237 (348)
T PLN03154 220 ALKRYF--PEGIDIYFDNVG 237 (348)
T ss_pred HHHHHC--CCCcEEEEECCC
Confidence 333322 136999999887
No 366
>PRK14968 putative methyltransferase; Provisional
Probab=94.04 E-value=0.86 Score=36.52 Aligned_cols=120 Identities=10% Similarity=0.058 Sum_probs=61.3
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCc-eEEEEccCCChHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQ-CIAMELDLCRLKSVK 100 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~-~~~~~~Dls~~~~v~ 100 (292)
++++++ -.|++ .|. .. ..++..+..|++ .+++..+.+.+.+.......+ +.++.+|+.+.
T Consensus 23 ~~~~vL-d~G~G------~G~--~~----~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---- 85 (188)
T PRK14968 23 KGDRVL-EVGTG------SGI--VA----IVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---- 85 (188)
T ss_pred CCCEEE-EEccc------cCH--HH----HHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc----
Confidence 466777 66654 443 22 222233556654 677777777666654321222 88888887542
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCC-CCCCCcchhhhhhhhhhHH---HHHHHHHHHHHHhcCCCCcEEEEEcC
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLG-FSHTEDGFETTFQVNHLAH---FYLTLQLENALIKGAKLFARVVVVSS 171 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~-~~~~~~~~~~~~~vN~~~~---~~l~~~ll~~l~~~~~~~~~iV~vsS 171 (292)
+.+ .++|+++.|..+.... .....+.+...+..+..+. -.+++.+.+.|+. . |.++++.+
T Consensus 86 -----~~~--~~~d~vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~--g--G~~~~~~~ 149 (188)
T PRK14968 86 -----FRG--DKFDVILFNPPYLPTEEEEEWDDWLNYALSGGKDGREVIDRFLDEVGRYLKP--G--GRILLLQS 149 (188)
T ss_pred -----ccc--cCceEEEECCCcCCCCchhhhhhhhhhhhccCcChHHHHHHHHHHHHHhcCC--C--eEEEEEEc
Confidence 111 2689999988765311 1111122222222222222 2345566666653 3 77766544
No 367
>PRK09620 hypothetical protein; Provisional
Probab=94.03 E-value=0.052 Score=45.66 Aligned_cols=38 Identities=8% Similarity=-0.047 Sum_probs=24.1
Q ss_pred CCCceEEEEcCC-C-------CCCC-C-cccchhhHHHHHHHHhhcCcEEEE
Q psy4251 23 YNGCLAILCTGD-M-------EFYP-R-YTGLKKKDGNLCFDLVQSSKLFYQ 64 (292)
Q Consensus 23 l~g~~~vlItGa-~-------~~~~-~-~~GiG~~~a~~~~~l~~~g~~v~~ 64 (292)
|+||+++ ||+| | |++. . ++=+|..+ +.++..+|+.|+.
T Consensus 1 l~gk~vl-ITaG~T~E~iD~VR~itN~SSGfiGs~L---A~~L~~~Ga~V~l 48 (229)
T PRK09620 1 MKGKKVL-ITSGGCLEKWDQVRGHTNMAKGTIGRII---AEELISKGAHVIY 48 (229)
T ss_pred CCCCEEE-EeCCCccCCcCCeeEecCCCcCHHHHHH---HHHHHHCCCeEEE
Confidence 4789999 8855 2 1122 2 24478888 6666678887763
No 368
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=93.64 E-value=0.87 Score=38.44 Aligned_cols=76 Identities=11% Similarity=0.038 Sum_probs=42.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|++++ |+|++ + +|.++++.+.. .|..|+ .++.++.+.+ +++ +... ..|..+.+....
T Consensus 134 ~~~~vl-i~g~~------~-~G~~~~~~a~~---~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~ 193 (271)
T cd05188 134 PGDTVL-VLGAG------G-VGLLAAQLAKA---AGARVIVTDRSDEKLELA-KEL-----GADH---VIDYKEEDLEEE 193 (271)
T ss_pred CCCEEE-EECCC------H-HHHHHHHHHHH---cCCeEEEEcCCHHHHHHH-HHh-----CCce---eccCCcCCHHHH
Confidence 577888 99997 7 99999666554 345554 3555544332 222 1111 123333333333
Q ss_pred HHHHHHHhCCCccEEEEcccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~ 122 (292)
+. ....+.+|++|+++|.
T Consensus 194 ~~---~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 194 LR---LTGGGGADVVIDAVGG 211 (271)
T ss_pred HH---HhcCCCCCEEEECCCC
Confidence 33 2233579999999874
No 369
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=93.64 E-value=0.38 Score=41.93 Aligned_cols=76 Identities=14% Similarity=0.033 Sum_probs=51.1
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhCCCCceEE
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEKPSAQCIA 88 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~ 88 (292)
++ |.|+ +|+|-++++.+...+-...+|+..+ ..|++.+++.+++..|..++..
T Consensus 2 Vl-VVGa-------GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~ 73 (291)
T cd01488 2 IL-VIGA-------GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTP 73 (291)
T ss_pred EE-EECC-------CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEE
Confidence 45 8888 7999999555443322224443211 4688888999999988889999
Q ss_pred EEccCCChHHHHHHHHHHHHhCCCccEEEEcc
Q psy4251 89 MELDLCRLKSVKKFAEEYQKKFRSLNILVLNA 120 (292)
Q Consensus 89 ~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nA 120 (292)
+..++.+.+ .++ +...|++|.+.
T Consensus 74 ~~~~i~~~~--~~f-------~~~fdvVi~al 96 (291)
T cd01488 74 HFGKIQDKD--EEF-------YRQFNIIICGL 96 (291)
T ss_pred EecccCchh--HHH-------hcCCCEEEECC
Confidence 888887532 122 34678888854
No 370
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=93.64 E-value=0.58 Score=41.23 Aligned_cols=78 Identities=10% Similarity=0.046 Sum_probs=44.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|.+++ |+|++ +++|..++..+.. .|..|+ .++.++.+.+ .++ +.... .|-.+.+...+
T Consensus 138 ~g~~VL-I~ga~------g~vG~~aiqlAk~---~G~~Vi~~~~s~~~~~~~-~~l-----Ga~~v---i~~~~~~~~~~ 198 (325)
T TIGR02825 138 GGETVM-VNAAA------GAVGSVVGQIAKL---KGCKVVGAAGSDEKVAYL-KKL-----GFDVA---FNYKTVKSLEE 198 (325)
T ss_pred CCCEEE-EeCCc------cHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHH-HHc-----CCCEE---EeccccccHHH
Confidence 477888 99999 9999999666553 455554 4666654443 222 22222 12222223333
Q ss_pred HHHHHHHhCCCccEEEEcccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~ 122 (292)
..+... .+.+|+++.+.|.
T Consensus 199 ~~~~~~--~~gvdvv~d~~G~ 217 (325)
T TIGR02825 199 TLKKAS--PDGYDCYFDNVGG 217 (325)
T ss_pred HHHHhC--CCCeEEEEECCCH
Confidence 333332 1369999998773
No 371
>PRK07411 hypothetical protein; Validated
Probab=93.63 E-value=0.28 Score=44.73 Aligned_cols=84 Identities=15% Similarity=0.070 Sum_probs=54.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEK 81 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~ 81 (292)
..|+..+|+ |.|+ +|+|-.+++.+...+-...+++..+ ..|++.+++++++.+
T Consensus 34 ~~L~~~~Vl-ivG~-------GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n 105 (390)
T PRK07411 34 KRLKAASVL-CIGT-------GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN 105 (390)
T ss_pred HHHhcCcEE-EECC-------CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC
Confidence 457788888 9999 7999999554333322223343221 457888999999999
Q ss_pred CCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcc
Q psy4251 82 PSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNA 120 (292)
Q Consensus 82 ~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nA 120 (292)
|..++..+...++.. ...+++ ...|+||.+.
T Consensus 106 p~v~v~~~~~~~~~~-~~~~~~-------~~~D~Vvd~~ 136 (390)
T PRK07411 106 PYCQVDLYETRLSSE-NALDIL-------APYDVVVDGT 136 (390)
T ss_pred CCCeEEEEecccCHH-hHHHHH-------hCCCEEEECC
Confidence 988888888777653 222221 2356666654
No 372
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.46 E-value=0.44 Score=38.21 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=48.2
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEcC------------------HHHHHHHHHHHHhhCCCCce
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQNC------------------WDKANDAISKILTEKPSAQC 86 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r~------------------~~~~~~~~~~l~~~~~~~~~ 86 (292)
++ |.|+ +|+|..+++. |+..|+ +++..+ ..|++.+.+++++..|..++
T Consensus 2 Vl-ViG~-------GglGs~ia~~---La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i 70 (174)
T cd01487 2 VG-IAGA-------GGLGSNIAVL---LARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKI 70 (174)
T ss_pred EE-EECc-------CHHHHHHHHH---HHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEE
Confidence 44 7888 7999999555 444443 343332 24677778888888887788
Q ss_pred EEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 87 IAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 87 ~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
..+..+++. +.+.++ +...|++|.+..
T Consensus 71 ~~~~~~~~~-~~~~~~-------l~~~DlVi~~~d 97 (174)
T cd01487 71 EAINIKIDE-NNLEGL-------FGDCDIVVEAFD 97 (174)
T ss_pred EEEEeecCh-hhHHHH-------hcCCCEEEECCC
Confidence 877777654 222232 235788888733
No 373
>KOG2013|consensus
Probab=93.45 E-value=0.29 Score=44.87 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=44.9
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC---cEEEEcC-------------------HHHHHHHHHHHHhh
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS---KLFYQNC-------------------WDKANDAISKILTE 80 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g---~~v~~r~-------------------~~~~~~~~~~l~~~ 80 (292)
+.+..++ |.|| +|||-++ +..|+..| ++|+..+ +.++.-+++...+-
T Consensus 10 i~~~riL-vVGa-------GGIGCEL---LKnLal~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~F 78 (603)
T KOG2013|consen 10 IKSGRIL-VVGA-------GGIGCEL---LKNLALTGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQF 78 (603)
T ss_pred hccCeEE-EEec-------CcccHHH---HHHHHHhcCCeeEEEeccceeccchhhhheeehhhcCchHHHHHHHHHHHh
Confidence 4566788 8999 7999999 66666665 5555322 34454555555555
Q ss_pred CCCCceEEEEccCCChHHHHHHHH
Q psy4251 81 KPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 81 ~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
.|+.++..++.|+.++..-..+++
T Consensus 79 npn~~l~~yhanI~e~~fnv~ff~ 102 (603)
T KOG2013|consen 79 NPNIKLVPYHANIKEPKFNVEFFR 102 (603)
T ss_pred CCCCceEeccccccCcchHHHHHH
Confidence 566666667777766644444444
No 374
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.44 E-value=0.15 Score=48.48 Aligned_cols=46 Identities=15% Similarity=0.268 Sum_probs=34.8
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKI 77 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l 77 (292)
.++++|+++ |+|+ +|+|+++ +..|...|+.|+ .|+.+++++..+++
T Consensus 375 ~~~~~k~vl-IlGa-------GGagrAi---a~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 375 SPLAGKLFV-VIGA-------GGAGKAL---AYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred cCCCCCEEE-EECC-------cHHHHHH---HHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 457899999 9999 7999999 555656665544 48888887776655
No 375
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=93.43 E-value=0.21 Score=43.76 Aligned_cols=73 Identities=10% Similarity=0.048 Sum_probs=49.9
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcE--EEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKL--FYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~--v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
..+ |-||+ +=-|.-+ +.++..+|.. +.+||..++..+.++| +.+...+++++ ++.+++.+
T Consensus 8 d~i-iYGAt------Gy~G~lv---ae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~- 69 (382)
T COG3268 8 DII-IYGAT------GYAGGLV---AEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMA- 69 (382)
T ss_pred eEE-EEccc------cchhHHH---HHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHH-
Confidence 456 99999 5556666 5556666654 4569999999988877 44555566655 44444433
Q ss_pred HHHHhCCCccEEEEccccc
Q psy4251 105 EYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~ 123 (292)
...++|+||+|.+
T Consensus 70 ------~~~~VVlncvGPy 82 (382)
T COG3268 70 ------SRTQVVLNCVGPY 82 (382)
T ss_pred ------hcceEEEeccccc
Confidence 3479999999965
No 376
>KOG0023|consensus
Probab=93.42 E-value=0.71 Score=40.43 Aligned_cols=65 Identities=15% Similarity=0.089 Sum_probs=41.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCC-ChHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLC-RLKSVKKF 102 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls-~~~~v~~~ 102 (292)
.|+.+- |+|+ +|||.-..+.+.++ .....++.++..+-+++.+.|- +... +|.+ |++.++++
T Consensus 181 pG~~vg-I~Gl-------GGLGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LG-----Ad~f---v~~~~d~d~~~~~ 243 (360)
T KOG0023|consen 181 PGKWVG-IVGL-------GGLGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLG-----ADVF---VDSTEDPDIMKAI 243 (360)
T ss_pred CCcEEE-EecC-------cccchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcC-----ccee---EEecCCHHHHHHH
Confidence 689999 9999 57999996665544 3334445567667777777663 3322 3555 66666666
Q ss_pred HHH
Q psy4251 103 AEE 105 (292)
Q Consensus 103 ~~~ 105 (292)
.+.
T Consensus 244 ~~~ 246 (360)
T KOG0023|consen 244 MKT 246 (360)
T ss_pred HHh
Confidence 444
No 377
>KOG0024|consensus
Probab=93.39 E-value=0.61 Score=40.89 Aligned_cols=84 Identities=11% Similarity=0.048 Sum_probs=54.6
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
.|.+++ |-|| +-||..+...+..++...+.++.-...+++-+.+ + +.++..-...-++.+.+.+.+
T Consensus 169 ~Gs~vL-V~GA-------GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~-----Ga~~~~~~~~~~~~~~~~~~v 234 (354)
T KOG0024|consen 169 KGSKVL-VLGA-------GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F-----GATVTDPSSHKSSPQELAELV 234 (354)
T ss_pred cCCeEE-EECC-------cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h-----CCeEEeeccccccHHHHHHHH
Confidence 477888 9999 7999999888777766665555566667655444 4 444444333333455555555
Q ss_pred HHHHHhCCCccEEEEcccc
Q psy4251 104 EEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~ 122 (292)
+...... .+|+.|.|.|.
T Consensus 235 ~~~~g~~-~~d~~~dCsG~ 252 (354)
T KOG0024|consen 235 EKALGKK-QPDVTFDCSGA 252 (354)
T ss_pred Hhhcccc-CCCeEEEccCc
Confidence 5544322 49999999996
No 378
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=93.37 E-value=0.23 Score=43.30 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=36.8
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC---------------------HHHHHHHHHHHHhhCCCCce
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC---------------------WDKANDAISKILTEKPSAQC 86 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~---------------------~~~~~~~~~~l~~~~~~~~~ 86 (292)
++ |.|+ +|+|-.+|+.+...+-..++++..+ ..|++.+++.|++.+|..++
T Consensus 2 VL-IvGa-------GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v 73 (307)
T cd01486 2 CL-LLGA-------GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDA 73 (307)
T ss_pred EE-EECC-------CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEE
Confidence 45 8898 7999999666444433223333111 23677778888888887777
Q ss_pred EEEEccC
Q psy4251 87 IAMELDL 93 (292)
Q Consensus 87 ~~~~~Dl 93 (292)
..+...+
T Consensus 74 ~~~~~~I 80 (307)
T cd01486 74 TGIVLSI 80 (307)
T ss_pred EEeeeec
Confidence 7766544
No 379
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=93.36 E-value=0.3 Score=39.62 Aligned_cols=82 Identities=10% Similarity=0.061 Sum_probs=38.7
Q ss_pred CCCceEEEEcCC-C-------CCCC--CcccchhhHHHHHHHHhhcCcEEEE-cCHHHHHHHHHHHHhhCCCCceEEEEc
Q psy4251 23 YNGCLAILCTGD-M-------EFYP--RYTGLKKKDGNLCFDLVQSSKLFYQ-NCWDKANDAISKILTEKPSAQCIAMEL 91 (292)
Q Consensus 23 l~g~~~vlItGa-~-------~~~~--~~~GiG~~~a~~~~~l~~~g~~v~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~ 91 (292)
|+||+++ ||+| | |++. -++-.|.++ +.++..+|+.|+. ........ ...+..++
T Consensus 1 l~gk~vl-ITaG~T~E~iD~VR~ItN~SSG~~G~~l---A~~~~~~Ga~V~li~g~~~~~~----------p~~~~~i~- 65 (185)
T PF04127_consen 1 LKGKKVL-ITAGPTREPIDPVRFITNRSSGKMGAAL---AEEAARRGAEVTLIHGPSSLPP----------PPGVKVIR- 65 (185)
T ss_dssp -TT-EEE-EEESB-EEESSSSEEEEES--SHHHHHH---HHHHHHTT-EEEEEE-TTS--------------TTEEEEE-
T ss_pred CCCCEEE-EECCCccccCCCceEecCCCcCHHHHHH---HHHHHHCCCEEEEEecCccccc----------cccceEEE-
Confidence 5788998 7754 3 1222 235678888 4455566766653 11111100 12344444
Q ss_pred cCCChHHHHHHHHHHHHhCCCccEEEEccccc
Q psy4251 92 DLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 92 Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
+.+.++..+.+.+. .+.-|++|++|++.
T Consensus 66 -v~sa~em~~~~~~~---~~~~Di~I~aAAVs 93 (185)
T PF04127_consen 66 -VESAEEMLEAVKEL---LPSADIIIMAAAVS 93 (185)
T ss_dssp --SSHHHHHHHHHHH---GGGGSEEEE-SB--
T ss_pred -ecchhhhhhhhccc---cCcceeEEEecchh
Confidence 55555554444444 45559999999986
No 380
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.33 E-value=0.27 Score=44.83 Aligned_cols=50 Identities=6% Similarity=0.005 Sum_probs=35.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~ 78 (292)
.+|++++++ |.|+ +-+|..+|+++.+..-...+|+.|+.++++++++++.
T Consensus 174 ~~L~~~~vl-vIGA-------Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~ 223 (414)
T COG0373 174 GSLKDKKVL-VIGA-------GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG 223 (414)
T ss_pred cccccCeEE-EEcc-------cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence 458899999 9998 5688888555443322334455699999999888773
No 381
>PRK14851 hypothetical protein; Provisional
Probab=93.30 E-value=0.35 Score=47.28 Aligned_cols=85 Identities=7% Similarity=-0.016 Sum_probs=57.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEK 81 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~ 81 (292)
..|++.+++ |.|. +|+|-.++..+...+-...+++..| ..|.+.+.+.+.+.+
T Consensus 39 ~kL~~~~Vl-IvG~-------GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~in 110 (679)
T PRK14851 39 ERLAEAKVA-IPGM-------GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSIN 110 (679)
T ss_pred HHHhcCeEE-EECc-------CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhC
Confidence 457788899 9998 7999999555444433223343211 457888889999999
Q ss_pred CCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 82 PSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 82 ~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
|..++..+...++ .+.+.++++ ..|+||.+..
T Consensus 111 P~~~I~~~~~~i~-~~n~~~~l~-------~~DvVid~~D 142 (679)
T PRK14851 111 PFLEITPFPAGIN-ADNMDAFLD-------GVDVVLDGLD 142 (679)
T ss_pred CCCeEEEEecCCC-hHHHHHHHh-------CCCEEEECCC
Confidence 9889999998886 344445432 4688876543
No 382
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=93.25 E-value=0.89 Score=39.20 Aligned_cols=86 Identities=13% Similarity=0.097 Sum_probs=56.1
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE----cC-----HH----HHHHHHHHHHhhCCCCceEEEEcc
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ----NC-----WD----KANDAISKILTEKPSAQCIAMELD 92 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~----r~-----~~----~~~~~~~~l~~~~~~~~~~~~~~D 92 (292)
|.++ |.|++ +|.|++. |..+.++ .|+.-++ |- +. -......+..... +--..-+..|
T Consensus 42 KkVL-viGaS------sGyGLa~-RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k-GlyAksingD 111 (398)
T COG3007 42 KKVL-VIGAS------SGYGLAA-RISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK-GLYAKSINGD 111 (398)
T ss_pred ceEE-EEecC------CcccHHH-HHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc-Cceeeecccc
Confidence 5566 99999 9999987 5456675 4444332 11 00 0111122222221 4455667889
Q ss_pred CCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 93 LCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 93 ls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
.=+.+--+.+++.|++.++++|.+|..-+
T Consensus 112 aFS~e~k~kvIe~Ik~~~g~vDlvvYSlA 140 (398)
T COG3007 112 AFSDEMKQKVIEAIKQDFGKVDLVVYSLA 140 (398)
T ss_pred hhhHHHHHHHHHHHHHhhccccEEEEecc
Confidence 88888889999999999999999998743
No 383
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]
Probab=93.18 E-value=0.69 Score=37.37 Aligned_cols=79 Identities=13% Similarity=-0.013 Sum_probs=52.3
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHH
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSV 99 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 99 (292)
..++.|++++ =-|++ .|+ +++ -+..|+...+.-+-.|.+.++-+.+...+. .+++.++.+|+++..
T Consensus 41 ~g~l~g~~V~-DlG~G------TG~-La~--ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l--~g~v~f~~~dv~~~~-- 106 (198)
T COG2263 41 RGDLEGKTVL-DLGAG------TGI-LAI--GAALLGASRVLAVDIDPEALEIARANAEEL--LGDVEFVVADVSDFR-- 106 (198)
T ss_pred cCCcCCCEEE-EcCCC------cCH-HHH--HHHhcCCcEEEEEecCHHHHHHHHHHHHhh--CCceEEEEcchhhcC--
Confidence 3778999998 77876 555 222 022232232222337888887777777664 679999999998643
Q ss_pred HHHHHHHHHhCCCccEEEEccccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
++.|.+|.|.-+.
T Consensus 107 -----------~~~dtvimNPPFG 119 (198)
T COG2263 107 -----------GKFDTVIMNPPFG 119 (198)
T ss_pred -----------CccceEEECCCCc
Confidence 4788888887544
No 384
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=93.17 E-value=0.4 Score=43.82 Aligned_cols=66 Identities=15% Similarity=0.031 Sum_probs=45.2
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhCC
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEKP 82 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~~ 82 (292)
.|+..+|+ |.|+ +|+|-.++..+...+-...+|+..+ ..|++.+++.|++.+|
T Consensus 39 ~L~~~~Vl-viG~-------GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np 110 (392)
T PRK07878 39 RLKNARVL-VIGA-------GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINP 110 (392)
T ss_pred HHhcCCEE-EECC-------CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCC
Confidence 46778888 9999 7999999555333322223333211 3578888899999988
Q ss_pred CCceEEEEccCCC
Q psy4251 83 SAQCIAMELDLCR 95 (292)
Q Consensus 83 ~~~~~~~~~Dls~ 95 (292)
..++..+..+++.
T Consensus 111 ~v~i~~~~~~i~~ 123 (392)
T PRK07878 111 LVNVRLHEFRLDP 123 (392)
T ss_pred CcEEEEEeccCCh
Confidence 8888877777764
No 385
>PRK06849 hypothetical protein; Provisional
Probab=93.16 E-value=0.75 Score=41.89 Aligned_cols=81 Identities=5% Similarity=-0.075 Sum_probs=46.2
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHH--HHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWD--KANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
+.++++ |||++ .++|+.+ +..+.+.|+.|++-+.. .... ..+.. .....++..-.+.+...+
T Consensus 3 ~~~~VL-I~G~~------~~~~l~i---ar~l~~~G~~Vi~~d~~~~~~~~-~s~~~-----d~~~~~p~p~~d~~~~~~ 66 (389)
T PRK06849 3 TKKTVL-ITGAR------APAALEL---ARLFHNAGHTVILADSLKYPLSR-FSRAV-----DGFYTIPSPRWDPDAYIQ 66 (389)
T ss_pred CCCEEE-EeCCC------cHHHHHH---HHHHHHCCCEEEEEeCCchHHHH-HHHhh-----hheEEeCCCCCCHHHHHH
Confidence 357888 99998 8899999 55566778888753222 2111 11111 123333223334444444
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
.+.++.++. ++|+||-...
T Consensus 67 ~L~~i~~~~-~id~vIP~~e 85 (389)
T PRK06849 67 ALLSIVQRE-NIDLLIPTCE 85 (389)
T ss_pred HHHHHHHHc-CCCEEEECCh
Confidence 444555554 4899998775
No 386
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=93.14 E-value=1.2 Score=39.66 Aligned_cols=95 Identities=14% Similarity=0.103 Sum_probs=56.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|+.+. |+|+ +|+|....+.+..+ |+.|+ .|+.++.+.+.+ | +....+ |-++.+....
T Consensus 166 pG~~V~-I~G~-------GGlGh~avQ~Aka~---ga~Via~~~~~~K~e~a~~-l-----GAd~~i---~~~~~~~~~~ 225 (339)
T COG1064 166 PGKWVA-VVGA-------GGLGHMAVQYAKAM---GAEVIAITRSEEKLELAKK-L-----GADHVI---NSSDSDALEA 225 (339)
T ss_pred CCCEEE-EECC-------cHHHHHHHHHHHHc---CCeEEEEeCChHHHHHHHH-h-----CCcEEE---EcCCchhhHH
Confidence 488888 9999 69998886655544 45555 488887765443 3 222222 2223333333
Q ss_pred HHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
+-+ ..|++|.+++ .. .....++.++. . |++|.++-..
T Consensus 226 ~~~-------~~d~ii~tv~-~~-----------------------~~~~~l~~l~~--~--G~~v~vG~~~ 262 (339)
T COG1064 226 VKE-------IADAIIDTVG-PA-----------------------TLEPSLKALRR--G--GTLVLVGLPG 262 (339)
T ss_pred hHh-------hCcEEEECCC-hh-----------------------hHHHHHHHHhc--C--CEEEEECCCC
Confidence 322 1899999988 31 12334445553 3 9999998874
No 387
>KOG1198|consensus
Probab=93.13 E-value=0.31 Score=43.68 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=47.8
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
-.|+.++ |.||+ +|.|.+....+.... . ..|+.-+.++..+.++++.+ . ...|-.+ .++
T Consensus 156 ~~g~~vL-v~ggs------ggVG~~aiQlAk~~~-~-~~v~t~~s~e~~~l~k~lGA----d----~vvdy~~----~~~ 214 (347)
T KOG1198|consen 156 SKGKSVL-VLGGS------GGVGTAAIQLAKHAG-A-IKVVTACSKEKLELVKKLGA----D----EVVDYKD----ENV 214 (347)
T ss_pred CCCCeEE-EEeCC------cHHHHHHHHHHHhcC-C-cEEEEEcccchHHHHHHcCC----c----EeecCCC----HHH
Confidence 3566777 99999 999999966655443 2 34443333334455554421 1 2246666 333
Q ss_pred HHHHHHh-CCCccEEEEccccc
Q psy4251 103 AEEYQKK-FRSLNILVLNAGVF 123 (292)
Q Consensus 103 ~~~~~~~-~~~id~lI~nAg~~ 123 (292)
.+++++. .+++|+|+-|.|-.
T Consensus 215 ~e~~kk~~~~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 215 VELIKKYTGKGVDVVLDCVGGS 236 (347)
T ss_pred HHHHHhhcCCCccEEEECCCCC
Confidence 3334332 46899999999864
No 388
>KOG4039|consensus
Probab=92.82 E-value=0.62 Score=37.27 Aligned_cols=154 Identities=17% Similarity=0.006 Sum_probs=84.3
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc-EEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-LFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.+++.++ |.||| +-.|..+.+++.+...-.. .++.|.... .. +. ...+.....|.+..++
T Consensus 16 mq~~s~f-vlGAt------G~~G~~llk~~~E~~~FSKV~~i~RR~~~-d~------at--~k~v~q~~vDf~Kl~~--- 76 (238)
T KOG4039|consen 16 MQNMSGF-VLGAT------GLCGGGLLKHAQEAPQFSKVYAILRRELP-DP------AT--DKVVAQVEVDFSKLSQ--- 76 (238)
T ss_pred hhccceE-EEecc------ccccHHHHHHHHhcccceeEEEEEeccCC-Cc------cc--cceeeeEEechHHHHH---
Confidence 5677888 99999 8899999666655544433 344554211 00 01 3355556677655443
Q ss_pred HHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCC
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~ 181 (292)
.++.+ -.+|+++++-|...... ..|+ .+.+..-=. ..+...-++... -++|.+||..+...
T Consensus 77 ~a~~~----qg~dV~FcaLgTTRgka--Gadg---fykvDhDyv----l~~A~~AKe~Gc--k~fvLvSS~GAd~s---- 137 (238)
T KOG4039|consen 77 LATNE----QGPDVLFCALGTTRGKA--GADG---FYKVDHDYV----LQLAQAAKEKGC--KTFVLVSSAGADPS---- 137 (238)
T ss_pred HHhhh----cCCceEEEeeccccccc--ccCc---eEeechHHH----HHHHHHHHhCCC--eEEEEEeccCCCcc----
Confidence 33333 46899999988752111 1111 111111101 112222344445 68999999866532
Q ss_pred CCCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhcCCCeEEEEecCCccc
Q psy4251 182 DTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKI 237 (292)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 237 (292)
..-.|-..|.-++.=.-+|.- =++..+.||.+.
T Consensus 138 -----------------SrFlY~k~KGEvE~~v~eL~F------~~~~i~RPG~ll 170 (238)
T KOG4039|consen 138 -----------------SRFLYMKMKGEVERDVIELDF------KHIIILRPGPLL 170 (238)
T ss_pred -----------------cceeeeeccchhhhhhhhccc------cEEEEecCccee
Confidence 233466666655543333221 268889999988
No 389
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=92.79 E-value=1.3 Score=39.14 Aligned_cols=117 Identities=12% Similarity=0.073 Sum_probs=69.1
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc----EEEEcCHHHHHHHHHHHHhhCCC-CceEEEEccCCChHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK----LFYQNCWDKANDAISKILTEKPS-AQCIAMELDLCRLKS 98 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~----~v~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~ 98 (292)
.++++. |+|+ +++|..+|. .+...+. .++.++.++++....++.+..+- .++... . .+.+
T Consensus 5 ~~~ki~-iiGa-------G~vG~~~a~---~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~- 69 (315)
T PRK00066 5 QHNKVV-LVGD-------GAVGSSYAY---ALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS- 69 (315)
T ss_pred CCCEEE-EECC-------CHHHHHHHH---HHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH-
Confidence 467888 9998 789999955 4444443 33457788888888888765421 122222 1 1221
Q ss_pred HHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhc-CCCCcEEEEEcCcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKG-AKLFARVVVVSSESHR 175 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~-~~~~~~iV~vsS~~~~ 175 (292)
. +..-|++|..||....+. .+ ....++.|. -+++.+.+.+.+. +. +.++++|.....
T Consensus 70 ------~----~~~adivIitag~~~k~g-~~---R~dll~~N~----~i~~~i~~~i~~~~~~--~~vivvsNP~d~ 127 (315)
T PRK00066 70 ------D----CKDADLVVITAGAPQKPG-ET---RLDLVEKNL----KIFKSIVGEVMASGFD--GIFLVASNPVDI 127 (315)
T ss_pred ------H----hCCCCEEEEecCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHhCCC--eEEEEccCcHHH
Confidence 1 235799999999853322 12 234444443 3445555555543 34 888888876433
No 390
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=92.35 E-value=0.49 Score=42.05 Aligned_cols=112 Identities=11% Similarity=0.019 Sum_probs=61.3
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcC---------cEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS---------KLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g---------~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
+. |+|++ +.+|..++.. +...+ ..++.++++. ........|+.|...
T Consensus 2 V~-IiGaa------G~VG~~~a~~---l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~ 57 (324)
T TIGR01758 2 VV-VTGAA------GQIGYALLPM---IARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAF 57 (324)
T ss_pred EE-EECCC------cHHHHHHHHH---HHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccc
Confidence 45 99998 8999999554 44322 2233332211 113334556665541
Q ss_pred HH--HH--HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhc--CCCCcEEEEEcCc
Q psy4251 99 VK--KF--AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKG--AKLFARVVVVSSE 172 (292)
Q Consensus 99 v~--~~--~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~--~~~~~~iV~vsS~ 172 (292)
.. .. .....+.....|++|++||..... .+.+...+..| .-+.+.+.+.+.+. +. +.|+++|..
T Consensus 58 ~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~----~~tr~~ll~~N----~~i~k~i~~~i~~~~~~~--~iiivvsNP 127 (324)
T TIGR01758 58 PLLDGVVPTHDPAVAFTDVDVAILVGAFPRKE----GMERRDLLSKN----VKIFKEQGRALDKLAKKD--CKVLVVGNP 127 (324)
T ss_pred hhcCceeccCChHHHhCCCCEEEEcCCCCCCC----CCcHHHHHHHH----HHHHHHHHHHHHhhCCCC--eEEEEeCCc
Confidence 11 00 001123345799999999975321 22345555555 44566666666654 34 778887765
Q ss_pred c
Q psy4251 173 S 173 (292)
Q Consensus 173 ~ 173 (292)
.
T Consensus 128 v 128 (324)
T TIGR01758 128 A 128 (324)
T ss_pred H
Confidence 3
No 391
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=92.31 E-value=0.51 Score=41.04 Aligned_cols=62 Identities=11% Similarity=0.104 Sum_probs=43.5
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEc-------------------CHHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQN-------------------CWDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r-------------------~~~~~~~~~~~l~ 78 (292)
..|...+++ |.|+ +|+|-++| ..|+..|. +++.. ...|++.+.++|+
T Consensus 15 ~kL~~s~VL-IvG~-------gGLG~Eia---KnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~ 83 (286)
T cd01491 15 KKLQKSNVL-ISGL-------GGLGVEIA---KNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLA 83 (286)
T ss_pred HHHhcCcEE-EEcC-------CHHHHHHH---HHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHH
Confidence 346677888 9999 79999994 44555553 33321 1467888888999
Q ss_pred hhCCCCceEEEEccC
Q psy4251 79 TEKPSAQCIAMELDL 93 (292)
Q Consensus 79 ~~~~~~~~~~~~~Dl 93 (292)
+.+|..++..+..++
T Consensus 84 eLNp~V~V~~~~~~~ 98 (286)
T cd01491 84 ELNPYVPVTVSTGPL 98 (286)
T ss_pred HHCCCCEEEEEeccC
Confidence 998888887776553
No 392
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=92.04 E-value=0.55 Score=41.47 Aligned_cols=74 Identities=8% Similarity=0.148 Sum_probs=46.9
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+.|++++ |.|+ +.+|..+++.+.......+.++.|+.+++++.++++ +. ..+ +.++..+.
T Consensus 176 l~~~~V~-ViGa-------G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~--~~~-----~~~~~~~~ 235 (311)
T cd05213 176 LKGKKVL-VIGA-------GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG--NAV-----PLDELLEL 235 (311)
T ss_pred ccCCEEE-EECc-------HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC--eEE-----eHHHHHHH
Confidence 6789999 8888 799999966655433333455668888887777665 22 111 22222222
Q ss_pred HHHHHHhCCCccEEEEccccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~ 123 (292)
+ ...|++|.+.+..
T Consensus 236 ---l----~~aDvVi~at~~~ 249 (311)
T cd05213 236 ---L----NEADVVISATGAP 249 (311)
T ss_pred ---H----hcCCEEEECCCCC
Confidence 2 2469999998854
No 393
>PLN00203 glutamyl-tRNA reductase
Probab=92.00 E-value=0.51 Score=44.64 Aligned_cols=48 Identities=4% Similarity=-0.058 Sum_probs=34.6
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKI 77 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l 77 (292)
++.+++++ |.|+ +++|..+++.+...+...+.|+.|+.++++.+.+++
T Consensus 263 ~l~~kkVl-VIGA-------G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 263 SHASARVL-VIGA-------GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCCCCEEE-EEeC-------HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 47899999 8898 799999966654432223455569998888776655
No 394
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=92.00 E-value=1.1 Score=41.42 Aligned_cols=113 Identities=12% Similarity=0.056 Sum_probs=67.3
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhc-------C----cEEEEcCHHHHHHHHHHHHhhC-CCC-ceEEEEccC
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQS-------S----KLFYQNCWDKANDAISKILTEK-PSA-QCIAMELDL 93 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~-------g----~~v~~r~~~~~~~~~~~l~~~~-~~~-~~~~~~~Dl 93 (292)
++. |+|++ +-+|..+ +..++.. + ..++.++.++++..+-+|.+.. +-. ++. +..
T Consensus 102 KV~-IIGAa------G~VG~~~---A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~-- 168 (444)
T PLN00112 102 NVA-VSGAA------GMISNHL---LFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI-- 168 (444)
T ss_pred EEE-EECCC------cHHHHHH---HHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--
Confidence 466 99998 8899999 5545444 3 3334578888888888887653 211 211 111
Q ss_pred CChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHh--cCCCCcEEEEEcC
Q psy4251 94 CRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIK--GAKLFARVVVVSS 171 (292)
Q Consensus 94 s~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~--~~~~~~~iV~vsS 171 (292)
.+.+. +..-|++|..||....+. +.....++.|. -+.+...+.+.+ ++. +.||++|.
T Consensus 169 ~~ye~-----------~kdaDiVVitAG~prkpG----~tR~dLl~~N~----~I~k~i~~~I~~~a~p~--~ivIVVsN 227 (444)
T PLN00112 169 DPYEV-----------FQDAEWALLIGAKPRGPG----MERADLLDING----QIFAEQGKALNEVASRN--VKVIVVGN 227 (444)
T ss_pred CCHHH-----------hCcCCEEEECCCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHhcCCC--eEEEEcCC
Confidence 12222 346799999999853221 22344555554 455666666655 234 78888886
Q ss_pred cc
Q psy4251 172 ES 173 (292)
Q Consensus 172 ~~ 173 (292)
..
T Consensus 228 Pv 229 (444)
T PLN00112 228 PC 229 (444)
T ss_pred cH
Confidence 53
No 395
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=91.97 E-value=1.1 Score=38.82 Aligned_cols=78 Identities=12% Similarity=0.124 Sum_probs=44.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|++++ |+|++ +++|.++++.+. ..|..|+ .++.++.+.+ +++ +.. ...|..+.+....
T Consensus 139 ~~~~vl-v~g~~------~~ig~~~~~~~~---~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~ 199 (323)
T cd05276 139 AGETVL-IHGGA------SGVGTAAIQLAK---ALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEE 199 (323)
T ss_pred CCCEEE-EEcCc------ChHHHHHHHHHH---HcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHH
Confidence 467888 99999 999999966544 4555555 3565554443 222 221 1233333333333
Q ss_pred HHHHHHHhCCCccEEEEcccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~ 122 (292)
+.+.. . .+.+|++++++|.
T Consensus 200 ~~~~~-~-~~~~d~vi~~~g~ 218 (323)
T cd05276 200 VKEAT-G-GRGVDVILDMVGG 218 (323)
T ss_pred HHHHh-C-CCCeEEEEECCch
Confidence 32222 1 1369999999883
No 396
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=91.85 E-value=0.52 Score=42.69 Aligned_cols=77 Identities=5% Similarity=0.014 Sum_probs=45.6
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+.+++++ |.|+ +++|+.+++.+..++. .+.++.|+.++++++.+.+ +.. +..+..+.+.+.+.
T Consensus 165 l~~~~Vl-ViGa-------G~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~~~l~~~ 227 (370)
T TIGR00518 165 VEPGDVT-IIGG-------GVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEF-----GGR---IHTRYSNAYEIEDA 227 (370)
T ss_pred CCCceEE-EEcC-------CHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhc-----Cce---eEeccCCHHHHHHH
Confidence 4567777 7788 7899999666555532 2444457777765544332 111 22344454443333
Q ss_pred HHHHHHhCCCccEEEEccccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~ 123 (292)
+ ...|++|+++++.
T Consensus 228 l-------~~aDvVI~a~~~~ 241 (370)
T TIGR00518 228 V-------KRADLLIGAVLIP 241 (370)
T ss_pred H-------ccCCEEEEccccC
Confidence 2 3479999988763
No 397
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=91.84 E-value=0.65 Score=42.90 Aligned_cols=48 Identities=6% Similarity=0.034 Sum_probs=33.3
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKI 77 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l 77 (292)
++.|++++ |.|+ +++|..+++.+...+.....++.|+.+++++.++++
T Consensus 179 ~~~~~~vl-ViGa-------G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 179 DLSGKKVL-VIGA-------GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred CccCCEEE-EECc-------hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 47889999 8888 799999966654332223445568888877766554
No 398
>PRK14852 hypothetical protein; Provisional
Probab=91.78 E-value=0.57 Score=47.26 Aligned_cols=85 Identities=9% Similarity=0.001 Sum_probs=56.8
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC-------------------HHHHHHHHHHHHhhC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC-------------------WDKANDAISKILTEK 81 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~-------------------~~~~~~~~~~l~~~~ 81 (292)
..|+..+|+ |.|. +|+|-.++..+...+-...+++..| ..|++.+++.+++.+
T Consensus 328 ~kL~~srVl-VvGl-------GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~IN 399 (989)
T PRK14852 328 RRLLRSRVA-IAGL-------GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVN 399 (989)
T ss_pred HHHhcCcEE-EECC-------cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHC
Confidence 347788888 8898 7999999554333322223333111 458888899999999
Q ss_pred CCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 82 PSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 82 ~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
|..++..+...++. +.+.++++ ..|+||.+..
T Consensus 400 P~v~I~~~~~~I~~-en~~~fl~-------~~DiVVDa~D 431 (989)
T PRK14852 400 PFLDIRSFPEGVAA-ETIDAFLK-------DVDLLVDGID 431 (989)
T ss_pred CCCeEEEEecCCCH-HHHHHHhh-------CCCEEEECCC
Confidence 98899999888744 45554432 4688876543
No 399
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=91.48 E-value=1.1 Score=39.29 Aligned_cols=73 Identities=16% Similarity=0.163 Sum_probs=42.1
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|.+++ |+|++ +++|.++++.+. ..|..|+ .++.++.+.+ + +. +.. .++ |. ++
T Consensus 162 ~~~~vl-I~ga~------g~vG~~~~~~a~---~~g~~v~~~~~~~~~~~~~-~---~~--~~~-~~~--~~---~~--- 216 (332)
T cd08259 162 KGDTVL-VTGAG------GGVGIHAIQLAK---ALGARVIAVTRSPEKLKIL-K---EL--GAD-YVI--DG---SK--- 216 (332)
T ss_pred CCCEEE-EECCC------CHHHHHHHHHHH---HcCCeEEEEeCCHHHHHHH-H---Hc--CCc-EEE--ec---HH---
Confidence 467788 99999 999999955544 5565654 4666554433 2 21 211 111 21 11
Q ss_pred HHHHHHHhCCCccEEEEcccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~ 122 (292)
+.+.+.+ ...+|++++++|.
T Consensus 217 ~~~~~~~-~~~~d~v~~~~g~ 236 (332)
T cd08259 217 FSEDVKK-LGGADVVIELVGS 236 (332)
T ss_pred HHHHHHh-ccCCCEEEECCCh
Confidence 2222322 2369999999874
No 400
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=91.45 E-value=2.5 Score=37.05 Aligned_cols=78 Identities=9% Similarity=0.063 Sum_probs=43.3
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|.+++ |.|++ +++|.+++..+.+ .|..|+. ++.++.+.+.+.+ +.. .++ |..+.+..+.
T Consensus 145 ~~~~vl-I~g~~------g~ig~~~~~~a~~---~G~~vi~~~~~~~~~~~~~~~~-----g~~-~~~--~~~~~~~~~~ 206 (329)
T cd05288 145 PGETVV-VSAAA------GAVGSVVGQIAKL---LGARVVGIAGSDEKCRWLVEEL-----GFD-AAI--NYKTPDLAEA 206 (329)
T ss_pred CCCEEE-EecCc------chHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHhhc-----CCc-eEE--ecCChhHHHH
Confidence 467888 99998 9999999666554 4555543 5565544333222 211 111 2223222222
Q ss_pred HHHHHHHhCCCccEEEEcccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~ 122 (292)
+. +... +.+|+++.+.|.
T Consensus 207 v~-~~~~--~~~d~vi~~~g~ 224 (329)
T cd05288 207 LK-EAAP--DGIDVYFDNVGG 224 (329)
T ss_pred HH-Hhcc--CCceEEEEcchH
Confidence 22 2211 469999998873
No 401
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=91.35 E-value=0.26 Score=33.40 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=21.1
Q ss_pred CC-ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCH
Q psy4251 24 NG-CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCW 67 (292)
Q Consensus 24 ~g-~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~ 67 (292)
+| |+++ |+|++ +|.|++. +.+..+ ..|+.-++-+.
T Consensus 37 ~GpK~VL-ViGaS------tGyGLAs-RIa~aF-g~gA~TiGV~f 72 (78)
T PF12242_consen 37 NGPKKVL-VIGAS------TGYGLAS-RIAAAF-GAGADTIGVSF 72 (78)
T ss_dssp TS-SEEE-EES-S------SHHHHHH-HHHHHH-CC--EEEEEE-
T ss_pred CCCceEE-EEecC------CcccHHH-HHHHHh-cCCCCEEEEee
Confidence 56 6677 99999 9999995 224444 66766665343
No 402
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=91.26 E-value=1.6 Score=39.64 Aligned_cols=118 Identities=9% Similarity=-0.057 Sum_probs=66.7
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC----cEE----EEcCHHHHHHHHHHHHhhC-CCC-ceEEEEccCCCh
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS----KLF----YQNCWDKANDAISKILTEK-PSA-QCIAMELDLCRL 96 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g----~~v----~~r~~~~~~~~~~~l~~~~-~~~-~~~~~~~Dls~~ 96 (292)
++. |+|++ +-+|..+|..+....-.+ +.+ +.++.++++..+.+|.+.. +-. ++.+ .. .+.
T Consensus 46 KV~-IIGAa------G~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~y 115 (387)
T TIGR01757 46 NVA-VSGAA------GMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DPY 115 (387)
T ss_pred EEE-EECCC------cHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CCH
Confidence 467 99998 889999955443333333 123 2467888888888887653 211 1111 11 121
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
+ .+..-|++|.+||....+. +.....+..|. -+.+...+.+.+..++.++||++|...
T Consensus 116 ~-----------~~kdaDIVVitAG~prkpg----~tR~dll~~N~----~I~k~i~~~I~~~a~~~~iviVVsNPv 173 (387)
T TIGR01757 116 E-----------VFEDADWALLIGAKPRGPG----MERADLLDING----QIFADQGKALNAVASKNCKVLVVGNPC 173 (387)
T ss_pred H-----------HhCCCCEEEECCCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEcCCcH
Confidence 1 2246799999999853322 22344454443 455666666655221127888888653
No 403
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=91.06 E-value=1.5 Score=40.51 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=49.5
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc------E--EEEcC-------------------HHHHHHHHHHHHhh
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK------L--FYQNC-------------------WDKANDAISKILTE 80 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~------~--v~~r~-------------------~~~~~~~~~~l~~~ 80 (292)
++ |.|+ +|+|-++ +..|+..|+ . |+..+ ..|++.+++.+++.
T Consensus 2 Vl-vVGa-------GGlGcE~---lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~l 70 (435)
T cd01490 2 VF-LVGA-------GAIGCEL---LKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAM 70 (435)
T ss_pred EE-EECC-------CHHHHHH---HHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHH
Confidence 45 8888 7999999 555555554 2 32111 45778888888888
Q ss_pred CCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEc
Q psy4251 81 KPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLN 119 (292)
Q Consensus 81 ~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~n 119 (292)
.|..++..+...+..... ..+-.++ +...|+||++
T Consensus 71 Np~v~I~a~~~~v~~~~~-~~~~~~f---~~~~DvVi~a 105 (435)
T cd01490 71 NPDLKITALQNRVGPETE-HIFNDEF---WEKLDGVANA 105 (435)
T ss_pred CCCCEEEEEecccChhhh-hhhhHHH---hcCCCEEEEC
Confidence 888888888877754221 1121222 3457888876
No 404
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=91.01 E-value=1.1 Score=39.82 Aligned_cols=77 Identities=8% Similarity=-0.004 Sum_probs=42.0
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
.|++++ |+|+ +++|...+..+..++.....++.++.++.+. +.++ +.... .|..+ +++.+
T Consensus 169 ~g~~Vl-V~G~-------G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~-a~~l-----Ga~~v---i~~~~-~~~~~-- 228 (343)
T PRK09880 169 QGKRVF-VSGV-------GPIGCLIVAAVKTLGAAEIVCADVSPRSLSL-AREM-----GADKL---VNPQN-DDLDH-- 228 (343)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHH-HHHc-----CCcEE---ecCCc-ccHHH--
Confidence 588888 8885 7999999665443321112223467666543 3333 22221 23333 22222
Q ss_pred HHHHHhCCCccEEEEcccc
Q psy4251 104 EEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~ 122 (292)
+.+..+.+|++|.++|.
T Consensus 229 --~~~~~g~~D~vid~~G~ 245 (343)
T PRK09880 229 --YKAEKGYFDVSFEVSGH 245 (343)
T ss_pred --HhccCCCCCEEEECCCC
Confidence 22223569999999883
No 405
>PLN02602 lactate dehydrogenase
Probab=90.99 E-value=2.8 Score=37.62 Aligned_cols=119 Identities=10% Similarity=-0.007 Sum_probs=66.2
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC-cEEEEcCHHHHHHHHHHHHhhCCCC-ceEEEEccCCChHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS-KLFYQNCWDKANDAISKILTEKPSA-QCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g-~~v~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dls~~~~v~~~~ 103 (292)
+.+. |+|+ +.+|..+|..+....-.. ..++..+.++++..+.+|....+-. ... +..+ ++.+
T Consensus 38 ~KI~-IIGa-------G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy~------ 101 (350)
T PLN02602 38 TKVS-VVGV-------GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDYA------ 101 (350)
T ss_pred CEEE-EECC-------CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCHH------
Confidence 5788 8897 789999965443322222 3344567777777777776653211 122 2211 1211
Q ss_pred HHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccc
Q psy4251 104 EEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHR 175 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~ 175 (292)
. ...-|++|.+||....+. .+ -...+..| .-+++.+.+.+.+.. + +.++++|.....
T Consensus 102 -~----~~daDiVVitAG~~~k~g-~t---R~dll~~N----~~I~~~i~~~I~~~~p~--~ivivvtNPvdv 159 (350)
T PLN02602 102 -V----TAGSDLCIVTAGARQIPG-ES---RLNLLQRN----VALFRKIIPELAKYSPD--TILLIVSNPVDV 159 (350)
T ss_pred -H----hCCCCEEEECCCCCCCcC-CC---HHHHHHHH----HHHHHHHHHHHHHHCCC--eEEEEecCchHH
Confidence 1 245799999999864322 12 23334444 345555555555443 4 888888876443
No 406
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=90.96 E-value=3.5 Score=38.63 Aligned_cols=76 Identities=8% Similarity=-0.066 Sum_probs=46.1
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhhCCCCceEEEEccCCCh
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTEKPSAQCIAMELDLCRL 96 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~ 96 (292)
..++++++++ |.|+ +++|.++|+. |...|+.|.+ ++.+......+.+++. + +.++..+-..
T Consensus 11 ~~~~~~~~v~-viG~-------G~~G~~~A~~---L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--g--v~~~~~~~~~- 74 (480)
T PRK01438 11 HSDWQGLRVV-VAGL-------GVSGFAAADA---LLELGARVTVVDDGDDERHRALAAILEAL--G--ATVRLGPGPT- 74 (480)
T ss_pred ccCcCCCEEE-EECC-------CHHHHHHHHH---HHHCCCEEEEEeCCchhhhHHHHHHHHHc--C--CEEEECCCcc-
Confidence 3457788988 8888 6899999544 5567777664 3344444445556543 2 3333322111
Q ss_pred HHHHHHHHHHHHhCCCccEEEEccccc
Q psy4251 97 KSVKKFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 97 ~~v~~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
.....|.||.+.|+.
T Consensus 75 ------------~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 75 ------------LPEDTDLVVTSPGWR 89 (480)
T ss_pred ------------ccCCCCEEEECCCcC
Confidence 013579999999985
No 407
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=90.67 E-value=0.95 Score=34.28 Aligned_cols=83 Identities=14% Similarity=0.101 Sum_probs=48.0
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCHHHHHHHHHHHHhh--------CCCCceEEEEccCCC
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCWDKANDAISKILTE--------KPSAQCIAMELDLCR 95 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~~~~~~~~~~l~~~--------~~~~~~~~~~~Dls~ 95 (292)
++- |.|+ +-.|..+ ...|...|+.|.. |+.+..+.+...+... .....+.+ +-+.|
T Consensus 12 ~I~-iIGa-------GrVG~~L---a~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~--iavpD 78 (127)
T PF10727_consen 12 KIG-IIGA-------GRVGTAL---ARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVF--IAVPD 78 (127)
T ss_dssp EEE-EECT-------SCCCCHH---HHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEE--E-S-C
T ss_pred EEE-EECC-------CHHHHHH---HHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEE--EEech
Confidence 455 7788 6889999 5556677888764 6666666665544211 11223333 33555
Q ss_pred hHHHHHHHHHHHHh--CCCccEEEEccccc
Q psy4251 96 LKSVKKFAEEYQKK--FRSLNILVLNAGVF 123 (292)
Q Consensus 96 ~~~v~~~~~~~~~~--~~~id~lI~nAg~~ 123 (292)
+.+..+++++... ..+=.+|+||.|..
T Consensus 79 -daI~~va~~La~~~~~~~g~iVvHtSGa~ 107 (127)
T PF10727_consen 79 -DAIAEVAEQLAQYGAWRPGQIVVHTSGAL 107 (127)
T ss_dssp -CHHHHHHHHHHCC--S-TT-EEEES-SS-
T ss_pred -HHHHHHHHHHHHhccCCCCcEEEECCCCC
Confidence 4789999999875 33446999999975
No 408
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=90.47 E-value=2.5 Score=37.96 Aligned_cols=77 Identities=12% Similarity=0.023 Sum_probs=43.7
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+.+++ |+|+ +-||+..+..+..++....+++.++.++++-+.+.. +..... +. ..+ ....
T Consensus 169 ~~~V~-V~Ga-------GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~-----g~~~~~---~~-~~~---~~~~ 228 (350)
T COG1063 169 GGTVV-VVGA-------GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG-----GADVVV---NP-SED---DAGA 228 (350)
T ss_pred CCEEE-EECC-------CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhC-----CCeEee---cC-ccc---cHHH
Confidence 34788 9999 799999855555444444444457788876655433 222211 11 111 2222
Q ss_pred HHHHh-CC-CccEEEEccc
Q psy4251 105 EYQKK-FR-SLNILVLNAG 121 (292)
Q Consensus 105 ~~~~~-~~-~id~lI~nAg 121 (292)
.+.+. .+ ..|++|-++|
T Consensus 229 ~~~~~t~g~g~D~vie~~G 247 (350)
T COG1063 229 EILELTGGRGADVVIEAVG 247 (350)
T ss_pred HHHHHhCCCCCCEEEECCC
Confidence 23222 23 5999999999
No 409
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=90.35 E-value=0.87 Score=41.97 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=33.1
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHH
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKI 77 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l 77 (292)
++.|++++ |.|+ +.+|..+++.+...+.....++.|+.+++++.++++
T Consensus 177 ~l~~~~Vl-ViGa-------G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 177 SLKGKKAL-LIGA-------GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred CccCCEEE-EECC-------hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 47789999 8898 799999966654432223445568888877666544
No 410
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=90.30 E-value=0.59 Score=47.73 Aligned_cols=78 Identities=12% Similarity=0.158 Sum_probs=52.2
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC-------------cEEEEcCHHHHHHHHHHHHhhCCCCceEEEE
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS-------------KLFYQNCWDKANDAISKILTEKPSAQCIAME 90 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g-------------~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~ 90 (292)
..|.++ |.|+ +.+|...++.+.+..... +.|+.++.++++++.+++ + ++..++
T Consensus 568 ~~~rIl-VLGA-------G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~--~~~~v~ 633 (1042)
T PLN02819 568 KSQNVL-ILGA-------GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----E--NAEAVQ 633 (1042)
T ss_pred cCCcEE-EECC-------CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----C--CCceEE
Confidence 356777 8998 799999966655442221 233346777776655543 2 466789
Q ss_pred ccCCChHHHHHHHHHHHHhCCCccEEEEcccc
Q psy4251 91 LDLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 91 ~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~ 122 (292)
+|++|.+++.++++ .+|+||++...
T Consensus 634 lDv~D~e~L~~~v~-------~~DaVIsalP~ 658 (1042)
T PLN02819 634 LDVSDSESLLKYVS-------QVDVVISLLPA 658 (1042)
T ss_pred eecCCHHHHHHhhc-------CCCEEEECCCc
Confidence 99999888666533 38999998764
No 411
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=90.09 E-value=1.3 Score=41.18 Aligned_cols=76 Identities=12% Similarity=0.009 Sum_probs=44.4
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
+.+|+++ |+|. +|+|.++ +..|...|+.|.+.+........+++.+.. ..+.+...+.. ..
T Consensus 3 ~~~~~~~-v~G~-------g~~G~~~---a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~--~gi~~~~g~~~-~~----- 63 (445)
T PRK04308 3 FQNKKIL-VAGL-------GGTGISM---IAYLRKNGAEVAAYDAELKPERVAQIGKMF--DGLVFYTGRLK-DA----- 63 (445)
T ss_pred CCCCEEE-EECC-------CHHHHHH---HHHHHHCCCEEEEEeCCCCchhHHHHhhcc--CCcEEEeCCCC-HH-----
Confidence 5688888 9998 6899999 455668888877643222112223343321 13444333221 11
Q ss_pred HHHHHHhCCCccEEEEccccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~ 123 (292)
+ ....|.||.+.|+.
T Consensus 64 ---~---~~~~d~vv~spgi~ 78 (445)
T PRK04308 64 ---L---DNGFDILALSPGIS 78 (445)
T ss_pred ---H---HhCCCEEEECCCCC
Confidence 1 13579999999986
No 412
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=89.31 E-value=13 Score=31.87 Aligned_cols=106 Identities=11% Similarity=-0.009 Sum_probs=54.7
Q ss_pred HHHhhcCcEEEE-cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccccCC-CCCCC
Q psy4251 53 FDLVQSSKLFYQ-NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGL-GFSHT 130 (292)
Q Consensus 53 ~~l~~~g~~v~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~-~~~~~ 130 (292)
..+...|.++.+ .+..+++.+.+.+.+.. -.++.++..|..+.. ...+++|.|+.++--.+. .....
T Consensus 91 ~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g-~~~v~~~~~D~~~~~----------~~~~~fD~Vl~D~Pcsg~G~~~~~ 159 (264)
T TIGR00446 91 ALMKNEGAIVANEFSKSRTKVLIANINRCG-VLNVAVTNFDGRVFG----------AAVPKFDAILLDAPCSGEGVIRKD 159 (264)
T ss_pred HHcCCCCEEEEEcCCHHHHHHHHHHHHHcC-CCcEEEecCCHHHhh----------hhccCCCEEEEcCCCCCCcccccC
Confidence 333334544333 77888888888887652 235777777754321 112468999987633211 00001
Q ss_pred Ccc----hhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 131 EDG----FETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 131 ~~~----~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
++. -+..+..-..-...+++...+.++ ++ |++|+.+++.
T Consensus 160 p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lk--pg--G~lvYstcs~ 202 (264)
T TIGR00446 160 PSRKKNWSEEDIQEISALQKELIDSAFDALK--PG--GVLVYSTCSL 202 (264)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHHHhcC--CC--CEEEEEeCCC
Confidence 111 111222112223345566666665 34 8999887753
No 413
>KOG1197|consensus
Probab=89.27 E-value=12 Score=31.99 Aligned_cols=157 Identities=15% Similarity=0.111 Sum_probs=78.8
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
|-+++ |--|. +|.|..++.+ +-..|.++|. .+.++.+.+.+ ++.- ...|-+.++-++++
T Consensus 147 GhtVl-vhaAA------GGVGlll~Ql---~ra~~a~tI~~asTaeK~~~ake-------nG~~--h~I~y~~eD~v~~V 207 (336)
T KOG1197|consen 147 GHTVL-VHAAA------GGVGLLLCQL---LRAVGAHTIATASTAEKHEIAKE-------NGAE--HPIDYSTEDYVDEV 207 (336)
T ss_pred CCEEE-EEecc------ccHHHHHHHH---HHhcCcEEEEEeccHHHHHHHHh-------cCCc--ceeeccchhHHHHH
Confidence 67888 88888 9999999555 4456666664 34444443332 1111 23455544433333
Q ss_pred HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccccccCCCC
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD 182 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~~~~~~~~ 182 (292)
.++-+ -..+|++.-..|.. .+...+ . .|+ +. |.+|..+-.++..++.++.
T Consensus 208 -~kiTn-gKGVd~vyDsvG~d---------t~~~sl------------~---~Lk--~~--G~mVSfG~asgl~~p~~l~ 257 (336)
T KOG1197|consen 208 -KKITN-GKGVDAVYDSVGKD---------TFAKSL------------A---ALK--PM--GKMVSFGNASGLIDPIPLN 257 (336)
T ss_pred -HhccC-CCCceeeeccccch---------hhHHHH------------H---Hhc--cC--ceEEEeccccCCCCCeehh
Confidence 22211 12588887777642 222222 1 232 22 8999988877777765444
Q ss_pred CCCccccCcCCCCCChhhhHHHHhHHHHHHHHHHHHhHhc--CCCeEEEEecCC
Q psy4251 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWY--KYKIALSSRHCC 234 (292)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~gi~v~~v~PG 234 (292)
++....+..-- +.+..|-....-+...+..+=.... ..+|+|+.+.|=
T Consensus 258 ~ls~k~l~lvr----psl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl 307 (336)
T KOG1197|consen 258 QLSPKALQLVR----PSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL 307 (336)
T ss_pred hcChhhhhhcc----HhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence 43322221100 0233444444333333222222221 225788888764
No 414
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=88.85 E-value=2.2 Score=37.61 Aligned_cols=116 Identities=11% Similarity=0.074 Sum_probs=59.4
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc----EEEEcCH--HHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK----LFYQNCW--DKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~----~v~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
++. |.|++ +.+|..+ +..++..|. .++.++. ++++....++.+........ ..+..++ +
T Consensus 2 kI~-IiGat------G~vG~~~---a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~--d-- 66 (309)
T cd05294 2 KVS-IIGAS------GRVGSAT---ALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISS--D-- 66 (309)
T ss_pred EEE-EECCC------ChHHHHH---HHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECC--C--
Confidence 466 89998 8999999 555556554 2334643 55555555554321110000 0111111 1
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhc-CCCCcEEEEEcCcc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKG-AKLFARVVVVSSES 173 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~-~~~~~~iV~vsS~~ 173 (292)
.+. ...-|++|.++|....+. .+ ....++.|.- +++.+.+.+.+. +. +.||++++..
T Consensus 67 --~~~----l~~aDiViitag~p~~~~-~~---r~dl~~~n~~----i~~~~~~~i~~~~~~--~~viv~~npv 124 (309)
T cd05294 67 --LSD----VAGSDIVIITAGVPRKEG-MS---RLDLAKKNAK----IVKKYAKQIAEFAPD--TKILVVTNPV 124 (309)
T ss_pred --HHH----hCCCCEEEEecCCCCCCC-CC---HHHHHHHHHH----HHHHHHHHHHHHCCC--eEEEEeCCch
Confidence 111 246799999999753211 12 2333444443 444444444433 34 7888888764
No 415
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=88.84 E-value=2.5 Score=37.57 Aligned_cols=115 Identities=12% Similarity=0.003 Sum_probs=62.2
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc-------EE--EEcC--HHHHHHHHHHHHhhC-CCC-ceEEEEccC
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-------LF--YQNC--WDKANDAISKILTEK-PSA-QCIAMELDL 93 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-------~v--~~r~--~~~~~~~~~~l~~~~-~~~-~~~~~~~Dl 93 (292)
++. |+|++ +.+|..+|.. +...+. .+ +..+ .++++..+.++.+.. +.. .+. +..
T Consensus 5 KV~-IIGa~------G~VG~~~a~~---l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~-- 71 (323)
T TIGR01759 5 RVA-VTGAA------GQIGYSLLFR---IASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-ATT-- 71 (323)
T ss_pred EEE-EECCC------cHHHHHHHHH---HHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Eec--
Confidence 466 89998 8999999554 444442 33 3343 244666666665442 110 111 110
Q ss_pred CChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 94 CRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 94 s~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
.+ .+....-|++|.+||....+. +.....+..|. -+.+.+.+.+.+..++.+.|+++|...
T Consensus 72 ~~-----------~~~~~daDvVVitAG~~~k~g----~tR~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsNPv 132 (323)
T TIGR01759 72 DP-----------EEAFKDVDAALLVGAFPRKPG----MERADLLSKNG----KIFKEQGKALNKVAKKDVKVLVVGNPA 132 (323)
T ss_pred Ch-----------HHHhCCCCEEEEeCCCCCCCC----CcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence 11 122245799999999853221 22344555554 455666666655432228888888653
No 416
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.74 E-value=0.92 Score=39.43 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=23.7
Q ss_pred CCCCCceEEEEcCCCCCCCCccc-chhhHHHHHHHHhhcCcEEEE
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTG-LKKKDGNLCFDLVQSSKLFYQ 64 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~G-iG~~~a~~~~~l~~~g~~v~~ 64 (292)
.+++||+++ |.|+ +| .|+.+ +..|...|+.|.+
T Consensus 155 i~l~Gk~vv-ViG~-------gg~vGkpi---a~~L~~~gatVtv 188 (283)
T PRK14192 155 IELAGKHAV-VVGR-------SAILGKPM---AMMLLNANATVTI 188 (283)
T ss_pred CCCCCCEEE-EECC-------cHHHHHHH---HHHHHhCCCEEEE
Confidence 467888888 8888 56 88888 4445566666653
No 417
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=88.71 E-value=0.73 Score=39.82 Aligned_cols=45 Identities=9% Similarity=-0.032 Sum_probs=30.8
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKI 77 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l 77 (292)
+++++ |-|+ +|-+++++..+.++....+.|+.|+.++++++++++
T Consensus 122 ~~~vl-ilGa-------GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVA-LRGS-------GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEE-EECC-------cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 46777 8888 799999955544433333556679998888776654
No 418
>PRK05442 malate dehydrogenase; Provisional
Probab=88.63 E-value=2.2 Score=37.94 Aligned_cols=119 Identities=11% Similarity=-0.057 Sum_probs=62.7
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC------cEEEEc--CHHHHHHHHHHHHhhC-CC-CceEEEEccCCC
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS------KLFYQN--CWDKANDAISKILTEK-PS-AQCIAMELDLCR 95 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g------~~v~~r--~~~~~~~~~~~l~~~~-~~-~~~~~~~~Dls~ 95 (292)
+.+. |+|++ +.+|..+|..+....-.+ ..++.. +.++++..+.++.+.. +. ..+.+ ..
T Consensus 5 ~KV~-IiGaa------G~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~---- 72 (326)
T PRK05442 5 VRVA-VTGAA------GQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD---- 72 (326)
T ss_pred cEEE-EECCC------cHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec----
Confidence 4677 99998 899999955433322222 333334 2334555555554432 11 01111 10
Q ss_pred hHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 96 LKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 96 ~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
...+....-|++|.+||....+. +.....++.| .-+++.+.+.+.+..++.+.++++|...
T Consensus 73 ---------~~y~~~~daDiVVitaG~~~k~g----~tR~dll~~N----a~i~~~i~~~i~~~~~~~~iiivvsNPv 133 (326)
T PRK05442 73 ---------DPNVAFKDADVALLVGARPRGPG----MERKDLLEAN----GAIFTAQGKALNEVAARDVKVLVVGNPA 133 (326)
T ss_pred ---------ChHHHhCCCCEEEEeCCCCCCCC----CcHHHHHHHH----HHHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 11222346899999999753321 2334445444 4466667777766321128888888653
No 419
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=88.61 E-value=6.5 Score=34.05 Aligned_cols=149 Identities=15% Similarity=0.124 Sum_probs=84.7
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhh-cCcEEEEc-CHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH-
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQ-SSKLFYQN-CWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE- 104 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~-~g~~v~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~- 104 (292)
+|||||= ||-|+.+| ++..+ .|+..+.. -..-+.+.++.+.+..+..+-..+.+|+.+......+.+
T Consensus 3 ~vIiTGl-------SGaGKs~A---l~~lED~Gy~cvDNlP~~Ll~~l~~~~~~~~~~~~~~Ai~iD~R~~~~~~~~~~~ 72 (284)
T PF03668_consen 3 LVIITGL-------SGAGKSTA---LRALEDLGYYCVDNLPPSLLPQLIELLAQSNSKIEKVAIVIDIRSREFFEDLFEA 72 (284)
T ss_pred EEEEeCC-------CcCCHHHH---HHHHHhcCeeEEcCCcHHHHHHHHHHHHhcCCCCceEEEEEeCCChHHHHHHHHH
Confidence 3449998 79999994 43333 46666542 244566666666644444566788999999776655544
Q ss_pred --HHHHhCCCccEEEEccccc------------CCCCC--CCCcchhh--------------hhhhhhhHHHHHHHHHHH
Q psy4251 105 --EYQKKFRSLNILVLNAGVF------------GLGFS--HTEDGFET--------------TFQVNHLAHFYLTLQLEN 154 (292)
Q Consensus 105 --~~~~~~~~id~lI~nAg~~------------~~~~~--~~~~~~~~--------------~~~vN~~~~~~l~~~ll~ 154 (292)
++.+..-.+.+|.+.|.-- +|... ...+++++ .+++.-+...-|-+.+..
T Consensus 73 ~~~l~~~~~~~~ilFLdA~d~~LirRy~eTRR~HPL~~~~~~le~I~~Er~~L~~lr~~Ad~vIDTs~l~~~~Lr~~i~~ 152 (284)
T PF03668_consen 73 LDELRKKGIDVRILFLDASDEVLIRRYSETRRRHPLSSDGSLLEAIEKERELLEPLRERADLVIDTSNLSVHQLRERIRE 152 (284)
T ss_pred HHHHHhcCCceEEEEEECChHHHHHHHHhccCCCCCCCCCCcHHHHHHHHHHHHHHHHhCCEEEECCCCCHHHHHHHHHH
Confidence 4444544789999998731 22211 11222222 244555555556666655
Q ss_pred HHHhcCCCCcEEEEEcCcccccccCCCCCCCcc
Q psy4251 155 ALIKGAKLFARVVVVSSESHRYSYITKDTISKS 187 (292)
Q Consensus 155 ~l~~~~~~~~~iV~vsS~~~~~~~~~~~~~~~~ 187 (292)
.+..... ..--|.+.|.+-..+.+...++-||
T Consensus 153 ~~~~~~~-~~l~v~i~SFGfK~GiP~dAD~VfD 184 (284)
T PF03668_consen 153 RFGGDKE-SRLTVTIQSFGFKYGIPPDADLVFD 184 (284)
T ss_pred HhccCCC-CceEEEEEEeccccCCCCCCCEEEE
Confidence 5543221 1456777787666555444443333
No 420
>COG4123 Predicted O-methyltransferase [General function prediction only]
Probab=88.53 E-value=2.7 Score=35.72 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=43.3
Q ss_pred ccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 42 TGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 42 ~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+.+|..+ +.+.....+..+-+.++.++.+.+.+.-..=..++.+++.|+.+....... .++|.+|+|.=
T Consensus 56 G~l~L~l---a~r~~~a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~~~~~--------~~fD~Ii~NPP 124 (248)
T COG4123 56 GALGLLL---AQRTEKAKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLKALVF--------ASFDLIICNPP 124 (248)
T ss_pred CHHHHHH---hccCCCCcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhhcccc--------cccCEEEeCCC
Confidence 5566665 333222222223366666666666664422256899999887654432222 36999999998
Q ss_pred ccCCC
Q psy4251 122 VFGLG 126 (292)
Q Consensus 122 ~~~~~ 126 (292)
++...
T Consensus 125 yf~~~ 129 (248)
T COG4123 125 YFKQG 129 (248)
T ss_pred CCCCc
Confidence 87543
No 421
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=88.13 E-value=1.7 Score=40.62 Aligned_cols=83 Identities=8% Similarity=0.031 Sum_probs=47.2
Q ss_pred CCCCCceEEEEcCC-C-------CCCC-C-cccchhhHHHHHHHHhhcCcEEEEcC-HHHHHHHHHHHHhhCCCCceEEE
Q psy4251 21 STYNGCLAILCTGD-M-------EFYP-R-YTGLKKKDGNLCFDLVQSSKLFYQNC-WDKANDAISKILTEKPSAQCIAM 89 (292)
Q Consensus 21 ~~l~g~~~vlItGa-~-------~~~~-~-~~GiG~~~a~~~~~l~~~g~~v~~r~-~~~~~~~~~~l~~~~~~~~~~~~ 89 (292)
.+|+||+++ ||+| | |++. + ++-+|+++|+. +..+|+.|..-+ ... + .. ...+.++
T Consensus 252 ~~l~gkkvL-ITaGpT~E~IDpVR~ItN~SSGkmG~alA~a---a~~~GA~VtlI~Gp~~-------~--~~-p~~v~~i 317 (475)
T PRK13982 252 KPLAGRRVL-ITAGPTHEPIDPVRYIANRSSGKQGFAIAAA---AAAAGAEVTLISGPVD-------L--AD-PQGVKVI 317 (475)
T ss_pred cccCCCEEE-EecCCccccCCcceeeCCCCchHHHHHHHHH---HHHCCCcEEEEeCCcC-------C--CC-CCCceEE
Confidence 469999999 8855 4 2333 2 34589999554 556666654311 100 1 01 1234444
Q ss_pred EccCCChHHHHHHHHHHHHhCCCccEEEEccccc
Q psy4251 90 ELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF 123 (292)
Q Consensus 90 ~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~ 123 (292)
. +. +.+++.+.+.+.++ .|++|++|++.
T Consensus 318 ~--V~---ta~eM~~av~~~~~-~Di~I~aAAVa 345 (475)
T PRK13982 318 H--VE---SARQMLAAVEAALP-ADIAIFAAAVA 345 (475)
T ss_pred E--ec---CHHHHHHHHHhhCC-CCEEEEecccc
Confidence 3 33 34455555555554 69999999986
No 422
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=87.94 E-value=2.8 Score=36.27 Aligned_cols=77 Identities=12% Similarity=0.146 Sum_probs=42.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|++++ |+|++ +++|.++++.+. ..|+.|+ .++.++.+.+ .++ +.... .|..+.+....
T Consensus 139 ~~~~vl-v~g~~------~~~g~~~~~~a~---~~g~~v~~~~~~~~~~~~~-~~~-----g~~~~---~~~~~~~~~~~ 199 (325)
T TIGR02824 139 AGETVL-IHGGA------SGIGTTAIQLAK---AFGARVFTTAGSDEKCAAC-EAL-----GADIA---INYREEDFVEV 199 (325)
T ss_pred CCCEEE-EEcCc------chHHHHHHHHHH---HcCCEEEEEeCCHHHHHHH-HHc-----CCcEE---EecCchhHHHH
Confidence 467888 99999 999999955544 4455554 4666554422 222 22111 22333333233
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
+.+.. . ...+|++|+++|
T Consensus 200 ~~~~~-~-~~~~d~~i~~~~ 217 (325)
T TIGR02824 200 VKAET-G-GKGVDVILDIVG 217 (325)
T ss_pred HHHHc-C-CCCeEEEEECCc
Confidence 22221 1 125999999887
No 423
>PRK07877 hypothetical protein; Provisional
Probab=87.68 E-value=2.6 Score=41.57 Aligned_cols=81 Identities=16% Similarity=0.074 Sum_probs=58.6
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEE-cC------------------HHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQ-NC------------------WDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~-r~------------------~~~~~~~~~~l~ 78 (292)
..|++.+|+ |.|. + +|-.+ +..|+..|+ ..++ .| ..|++.+++++.
T Consensus 103 ~~L~~~~V~-IvG~-------G-lGs~~---a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~ 170 (722)
T PRK07877 103 ERLGRLRIG-VVGL-------S-VGHAI---AHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIA 170 (722)
T ss_pred HHHhcCCEE-EEEe-------c-HHHHH---HHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHH
Confidence 347788888 8886 4 89888 555666663 3222 21 468888999999
Q ss_pred hhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 79 TEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 79 ~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+.+|..++..+...++ .+.+.+++ ...|+||.|.-
T Consensus 171 ~inp~i~v~~~~~~i~-~~n~~~~l-------~~~DlVvD~~D 205 (722)
T PRK07877 171 ELDPYLPVEVFTDGLT-EDNVDAFL-------DGLDVVVEECD 205 (722)
T ss_pred HHCCCCEEEEEeccCC-HHHHHHHh-------cCCCEEEECCC
Confidence 9999999999999998 56666553 24788888764
No 424
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=87.57 E-value=1.1 Score=41.99 Aligned_cols=46 Identities=15% Similarity=0.089 Sum_probs=33.1
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKI 77 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l 77 (292)
.++++++++ |+|+ +|+|+++ +..+...|+.|+ .|+.+++++..+++
T Consensus 328 ~~~~~k~vl-IiGa-------GgiG~ai---a~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 328 IPLNNQHVA-IVGA-------GGAAKAI---ATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred CCcCCCEEE-EEcC-------cHHHHHH---HHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 356788998 9996 7999999 555556665554 48887777665543
No 425
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=87.54 E-value=3.4 Score=37.24 Aligned_cols=77 Identities=13% Similarity=-0.053 Sum_probs=42.5
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc-EEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCC-hHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-LFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCR-LKSV 99 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v 99 (292)
.|.+++ |+|+ +++|..++..+..+ |+ .|+ .++.++.+.+ +++ +... ..|..+ .+++
T Consensus 185 ~g~~Vl-V~G~-------G~iG~~a~q~Ak~~---G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~---~i~~~~~~~~~ 244 (368)
T TIGR02818 185 EGDTVA-VFGL-------GGIGLSVIQGARMA---KASRIIAIDINPAKFELA-KKL-----GATD---CVNPNDYDKPI 244 (368)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHc---CCCeEEEEcCCHHHHHHH-HHh-----CCCe---EEcccccchhH
Confidence 477888 8885 89999996665443 44 343 3666665443 333 2222 123332 2223
Q ss_pred HHHHHHHHHhCCCccEEEEcccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~ 122 (292)
.+.+.++.. +.+|++|.++|.
T Consensus 245 ~~~v~~~~~--~g~d~vid~~G~ 265 (368)
T TIGR02818 245 QEVIVEITD--GGVDYSFECIGN 265 (368)
T ss_pred HHHHHHHhC--CCCCEEEECCCC
Confidence 333333322 369999999884
No 426
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=87.26 E-value=3.1 Score=36.44 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=42.6
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|.+++ |+||+ +++|..++..+.. .|+.|+ .++.++.+.+. ++ +... + .|-.+.+..+.
T Consensus 143 ~g~~vl-I~ga~------g~vG~~aiqlA~~---~G~~vi~~~~s~~~~~~l~-~~-----Ga~~-v--i~~~~~~~~~~ 203 (329)
T cd08294 143 AGETVV-VNGAA------GAVGSLVGQIAKI---KGCKVIGCAGSDDKVAWLK-EL-----GFDA-V--FNYKTVSLEEA 203 (329)
T ss_pred CCCEEE-EecCc------cHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHH-Hc-----CCCE-E--EeCCCccHHHH
Confidence 478888 99999 9999999666554 355554 35665544332 22 2221 1 23222222222
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
+.+... +.+|+++.+.|
T Consensus 204 -v~~~~~--~gvd~vld~~g 220 (329)
T cd08294 204 -LKEAAP--DGIDCYFDNVG 220 (329)
T ss_pred -HHHHCC--CCcEEEEECCC
Confidence 222211 36999998877
No 427
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=87.20 E-value=5 Score=35.18 Aligned_cols=113 Identities=15% Similarity=0.049 Sum_probs=63.3
Q ss_pred EcCCCCCCCCcccchhhHHHHHHHHhhcC----cEEEEcCHHHHHHHHHHHHhhCCC-CceEEEEccCCChHHHHHHHHH
Q psy4251 31 CTGDMEFYPRYTGLKKKDGNLCFDLVQSS----KLFYQNCWDKANDAISKILTEKPS-AQCIAMELDLCRLKSVKKFAEE 105 (292)
Q Consensus 31 ItGa~~~~~~~~GiG~~~a~~~~~l~~~g----~~v~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~~~~ 105 (292)
|.|+ +++|..+| ..++..| ..++..+.++++....+|.+..+. .......+ ++. +.
T Consensus 3 iiGa-------G~VG~~~a---~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~-------~~ 63 (300)
T cd00300 3 IIGA-------GNVGAAVA---FALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY-------AD 63 (300)
T ss_pred EECC-------CHHHHHHH---HHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH-------HH
Confidence 6677 67999994 4454545 333457777788888888765322 11121111 111 12
Q ss_pred HHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 106 YQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 106 ~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+ ..-|++|.+||....+. +.....+..| .-+++.+.+.+.+..+ .+.|+++|.....
T Consensus 64 l----~~aDiVIitag~p~~~~----~~R~~l~~~n----~~i~~~~~~~i~~~~p-~~~viv~sNP~d~ 120 (300)
T cd00300 64 A----ADADIVVITAGAPRKPG----ETRLDLINRN----APILRSVITNLKKYGP-DAIILVVSNPVDI 120 (300)
T ss_pred h----CCCCEEEEcCCCCCCCC----CCHHHHHHHH----HHHHHHHHHHHHHhCC-CeEEEEccChHHH
Confidence 2 45799999999753221 1223333333 4455666666655432 2888888876543
No 428
>KOG2015|consensus
Probab=87.01 E-value=1.4 Score=38.60 Aligned_cols=64 Identities=16% Similarity=0.083 Sum_probs=44.8
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC---cEEEEcC-------------------HHHHHHHHHHHHhh
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS---KLFYQNC-------------------WDKANDAISKILTE 80 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g---~~v~~r~-------------------~~~~~~~~~~l~~~ 80 (292)
+....++ |.|| +|+|-++ +..|+-.| .+|+..+ ..|++.+++-+.+.
T Consensus 38 l~~~kiL-viGA-------GGLGCEl---LKnLal~gF~~~~viDmDTId~sNLNRQFLF~~~DiG~pKAqvAA~fvn~R 106 (422)
T KOG2015|consen 38 LQDCKIL-VIGA-------GGLGCEL---LKNLALSGFRQLHVIDMDTIDLSNLNRQFLFRESDIGEPKAQVAAEFVNRR 106 (422)
T ss_pred HhhCcEE-EEcc-------CcccHHH---HHhHHhhccceeEEEeecceecccchhhhcccccccCchhHHHHHHHHHhh
Confidence 4566777 9999 7999999 77777766 4555322 45677777777777
Q ss_pred CCCCceEEEEccCCChH
Q psy4251 81 KPSAQCIAMELDLCRLK 97 (292)
Q Consensus 81 ~~~~~~~~~~~Dls~~~ 97 (292)
.|+..+.....++.|..
T Consensus 107 vp~~~v~~h~~kIqd~~ 123 (422)
T KOG2015|consen 107 VPGCVVVPHRQKIQDKP 123 (422)
T ss_pred CCCcEEeeeecchhcCC
Confidence 77777677766666543
No 429
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=86.24 E-value=12 Score=33.33 Aligned_cols=39 Identities=15% Similarity=0.032 Sum_probs=26.4
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDA 73 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~ 73 (292)
.|++++ |.|+ +++|..++..+... |..|+ .++.++.+.+
T Consensus 166 ~g~~Vl-V~G~-------G~vG~~a~~~a~~~---G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 166 KGDLVI-VIGA-------GGVGGYMVQTAKAM---GAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHc---CCeEEEEcCCHHHHHHH
Confidence 478888 9997 79999996665544 44444 3677665543
No 430
>PLN02740 Alcohol dehydrogenase-like
Probab=86.06 E-value=3.6 Score=37.22 Aligned_cols=80 Identities=11% Similarity=-0.060 Sum_probs=42.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCCh-HHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRL-KSVKKF 102 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~ 102 (292)
.|.+++ |.|+ +++|..++..+..++....+++.++.++.+.+ +++ +... ++ |..+. ++..+.
T Consensus 198 ~g~~Vl-V~G~-------G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~~-~i--~~~~~~~~~~~~ 260 (381)
T PLN02740 198 AGSSVA-IFGL-------GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEM-----GITD-FI--NPKDSDKPVHER 260 (381)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHc-----CCcE-EE--ecccccchHHHH
Confidence 477888 8885 89999996665544211122234666665544 222 2222 22 33322 123333
Q ss_pred HHHHHHhCCCccEEEEcccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~ 122 (292)
+.++.. +.+|++|.++|.
T Consensus 261 v~~~~~--~g~dvvid~~G~ 278 (381)
T PLN02740 261 IREMTG--GGVDYSFECAGN 278 (381)
T ss_pred HHHHhC--CCCCEEEECCCC
Confidence 333322 269999999884
No 431
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=85.91 E-value=4.2 Score=36.60 Aligned_cols=80 Identities=14% Similarity=-0.054 Sum_probs=44.0
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCCh-HHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRL-KSVKKF 102 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~ 102 (292)
.|.+++ |.|+ +++|..++..+..++....+++.++.++.+.+ +++ +.... .|..+. +++.+.
T Consensus 186 ~g~~Vl-V~G~-------G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~~---i~~~~~~~~~~~~ 248 (368)
T cd08300 186 PGSTVA-VFGL-------GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATDC---VNPKDHDKPIQQV 248 (368)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCEE---EcccccchHHHHH
Confidence 478888 8874 89999996665544221222234677765533 333 22221 233332 234444
Q ss_pred HHHHHHhCCCccEEEEcccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~ 122 (292)
+.++.. +.+|+++.+.|.
T Consensus 249 v~~~~~--~g~d~vid~~g~ 266 (368)
T cd08300 249 LVEMTD--GGVDYTFECIGN 266 (368)
T ss_pred HHHHhC--CCCcEEEECCCC
Confidence 444322 369999998873
No 432
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=85.68 E-value=14 Score=34.29 Aligned_cols=125 Identities=10% Similarity=0.008 Sum_probs=63.2
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE-cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ-NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|.+++ =.|++ ++|....+ +......|.++.. .+..+++.+.+.+.... -.++.++..|..+......
T Consensus 253 g~~VL-Dl~ag-----~G~kt~~l---a~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g-~~~v~~~~~D~~~~~~~~~-- 320 (434)
T PRK14901 253 GEVIL-DACAA-----PGGKTTHI---AELMGDQGEIWAVDRSASRLKKLQENAQRLG-LKSIKILAADSRNLLELKP-- 320 (434)
T ss_pred cCEEE-EeCCC-----CchhHHHH---HHHhCCCceEEEEcCCHHHHHHHHHHHHHcC-CCeEEEEeCChhhcccccc--
Confidence 55665 44433 04444444 3333334544443 77888888888876552 2358888888765421100
Q ss_pred HHHHHhCCCccEEEEcc---c--ccCCCC----CCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 104 EEYQKKFRSLNILVLNA---G--VFGLGF----SHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nA---g--~~~~~~----~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
...+.+|.|+.+| | ...... ..+.++++.. ..-...+++.+...++ ++ |++|+.+++.
T Consensus 321 ----~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l----~~~Q~~iL~~a~~~lk--pg--G~lvystcsi 387 (434)
T PRK14901 321 ----QWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQEL----APLQAELLESLAPLLK--PG--GTLVYATCTL 387 (434)
T ss_pred ----cccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHH----HHHHHHHHHHHHHhcC--CC--CEEEEEeCCC
Confidence 0113689999865 2 221111 1112221111 1112344555555554 34 9999987753
No 433
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=85.61 E-value=1.7 Score=37.24 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=42.3
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
+++ |+||| + -|+.+ +..|.+.|+.|++ ++....+... . . ....+..|.-+.++..++++
T Consensus 2 ~IL-vlGGT------~-egr~l---a~~L~~~g~~v~~s~~t~~~~~~~~----~---~-g~~~v~~g~l~~~~l~~~l~ 62 (256)
T TIGR00715 2 TVL-LMGGT------V-DSRAI---AKGLIAQGIEILVTVTTSEGKHLYP----I---H-QALTVHTGALDPQELREFLK 62 (256)
T ss_pred eEE-EEech------H-HHHHH---HHHHHhCCCeEEEEEccCCcccccc----c---c-CCceEEECCCCHHHHHHHHH
Confidence 456 99997 4 48888 6666677887764 4443322211 1 1 12233455556666666654
Q ss_pred HHHHhCCCccEEEEccc
Q psy4251 105 EYQKKFRSLNILVLNAG 121 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg 121 (292)
+ .++|+||..+.
T Consensus 63 ~-----~~i~~VIDAtH 74 (256)
T TIGR00715 63 R-----HSIDILVDATH 74 (256)
T ss_pred h-----cCCCEEEEcCC
Confidence 4 26999998775
No 434
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=85.58 E-value=9 Score=34.00 Aligned_cols=126 Identities=9% Similarity=0.029 Sum_probs=61.9
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCC--CCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKP--SAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~ 101 (292)
+.+++. |.|+ +.+|..+|..++...-....++..++++++...-++..... +....+... +|.
T Consensus 5 ~~~KI~-IIGa-------G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~----- 69 (321)
T PTZ00082 5 KRRKIS-LIGS-------GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNY----- 69 (321)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCH-----
Confidence 345677 8887 67899995553322212233444666554322222222110 111222110 121
Q ss_pred HHHHHHHhCCCccEEEEcccccCCCCCCCC-cchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGVFGLGFSHTE-DGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~~~~~~~~~~-~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+.+ ..-|++|.++|....+.+.+. ......+..|. -+.+.+.+.+.+..+ .+.++++|.....
T Consensus 70 --~~l----~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~----~i~~~i~~~i~~~~p-~a~~iv~sNP~di 133 (321)
T PTZ00082 70 --EDI----AGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNA----KIMDEVAEGIKKYCP-NAFVIVITNPLDV 133 (321)
T ss_pred --HHh----CCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHH----HHHHHHHHHHHHHCC-CeEEEEecCcHHH
Confidence 112 357999999998643222100 02244455553 456666666665442 1678888876543
No 435
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=85.56 E-value=3.7 Score=35.99 Aligned_cols=39 Identities=8% Similarity=-0.172 Sum_probs=27.5
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKA 70 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~ 70 (292)
.++.|++++ |.|. +++|+.++..+. ..|+.|. .|+.++.
T Consensus 148 ~~l~g~kvl-ViG~-------G~iG~~~a~~L~---~~Ga~V~v~~r~~~~~ 188 (296)
T PRK08306 148 ITIHGSNVL-VLGF-------GRTGMTLARTLK---ALGANVTVGARKSAHL 188 (296)
T ss_pred CCCCCCEEE-EECC-------cHHHHHHHHHHH---HCCCEEEEEECCHHHH
Confidence 567899999 9998 689999955544 4455554 4775543
No 436
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=85.56 E-value=6.3 Score=35.02 Aligned_cols=38 Identities=13% Similarity=-0.040 Sum_probs=24.6
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcE-E--EEcCHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKL-F--YQNCWDKAND 72 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~-v--~~r~~~~~~~ 72 (292)
.|++++ |+|+ +++|.+++..+..+ |.. | +.++.++.+.
T Consensus 160 ~g~~vl-V~G~-------g~vG~~~~~~a~~~---G~~~v~~~~~~~~~~~~ 200 (347)
T PRK10309 160 EGKNVI-IIGA-------GTIGLLAIQCAVAL---GAKSVTAIDINSEKLAL 200 (347)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHc---CCCeEEEECCCHHHHHH
Confidence 478888 8875 78999996665544 443 2 3366666543
No 437
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=85.54 E-value=6.6 Score=32.29 Aligned_cols=80 Identities=15% Similarity=0.166 Sum_probs=40.4
Q ss_pred ccCCCCCCCCCCceEEEE-----cCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEE
Q psy4251 14 NKLLHPASTYNGCLAILC-----TGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIA 88 (292)
Q Consensus 14 ~~~~~~~~~l~g~~~vlI-----tGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~ 88 (292)
-...++..+++||+++|| ||+| -++.++.+.+.....+.|.+ +-..+++.+.++.. ..++.+
T Consensus 113 yr~~~~~~~~~g~~VIlVDDGiATGat---------m~aAi~~~r~~~~~~IviAV--PV~p~~a~~~l~s~--~D~vvc 179 (220)
T COG1926 113 YRGGRPVPSLKGRTVILVDDGIATGAT---------MKAAVRALRAKGPKEIVIAV--PVAPEDAAAELESE--ADEVVC 179 (220)
T ss_pred HcCCCCCCCCCCCEEEEEeCCcchhHH---------HHHHHHHHHhcCCceEEEEc--ccCCHHHHHHHHhh--cCeEEE
Confidence 345778899999999955 4444 33333333333223333332 33344555666655 445555
Q ss_pred EEccCCChHHHHHHHHHHH
Q psy4251 89 MELDLCRLKSVKKFAEEYQ 107 (292)
Q Consensus 89 ~~~Dls~~~~v~~~~~~~~ 107 (292)
+..--. ..+|..+.+++.
T Consensus 180 ~~~P~~-F~AVg~~Y~dF~ 197 (220)
T COG1926 180 LYMPAP-FEAVGEFYRDFR 197 (220)
T ss_pred EcCCcc-HHHHHHHHHHHh
Confidence 432221 455555554443
No 438
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=85.50 E-value=15 Score=32.34 Aligned_cols=116 Identities=14% Similarity=0.025 Sum_probs=65.7
Q ss_pred EcCCCCCCCCcccchhhHHHHHHHHhhcC-cEEEEcCHHHHHHHHHHHHhhCC---CCceEEEEccCCChHHHHHHHHHH
Q psy4251 31 CTGDMEFYPRYTGLKKKDGNLCFDLVQSS-KLFYQNCWDKANDAISKILTEKP---SAQCIAMELDLCRLKSVKKFAEEY 106 (292)
Q Consensus 31 ItGa~~~~~~~~GiG~~~a~~~~~l~~~g-~~v~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dls~~~~v~~~~~~~ 106 (292)
|.|+ +.+|..+|..++...... ..++..+.++++..+.+|....+ ...+..... +.+ .
T Consensus 4 IIGa-------G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y~-------~- 65 (307)
T cd05290 4 VIGA-------GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DYD-------D- 65 (307)
T ss_pred EECC-------CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CHH-------H-
Confidence 6777 689999966544332222 33445777778777777876432 113333322 222 2
Q ss_pred HHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCccc
Q psy4251 107 QKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESH 174 (292)
Q Consensus 107 ~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~ 174 (292)
...-|++|.+||....+. .+. +....++.| .-+++...|.+.+..+ .+.++++|...-
T Consensus 66 ---~~~aDivvitaG~~~kpg-~tr-~R~dll~~N----~~I~~~i~~~i~~~~p-~~i~ivvsNPvD 123 (307)
T cd05290 66 ---CADADIIVITAGPSIDPG-NTD-DRLDLAQTN----AKIIREIMGNITKVTK-EAVIILITNPLD 123 (307)
T ss_pred ---hCCCCEEEECCCCCCCCC-CCc-hHHHHHHHH----HHHHHHHHHHHHHhCC-CeEEEEecCcHH
Confidence 245799999999864322 221 023344444 4566777777766553 277777776643
No 439
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=85.49 E-value=3.8 Score=29.94 Aligned_cols=67 Identities=7% Similarity=0.060 Sum_probs=41.8
Q ss_pred EcCCCCCCCCcccchhhHHHHHHHHhhcC--cEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHHH
Q psy4251 31 CTGDMEFYPRYTGLKKKDGNLCFDLVQSS--KLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQK 108 (292)
Q Consensus 31 ItGa~~~~~~~~GiG~~~a~~~~~l~~~g--~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~ 108 (292)
|-|. +.+|+.+++. |.+.+ +.++.++++..+++. +. .+.++.+|.++++..+++-
T Consensus 3 I~G~-------g~~~~~i~~~---L~~~~~~vvvid~d~~~~~~~~----~~----~~~~i~gd~~~~~~l~~a~----- 59 (116)
T PF02254_consen 3 IIGY-------GRIGREIAEQ---LKEGGIDVVVIDRDPERVEELR----EE----GVEVIYGDATDPEVLERAG----- 59 (116)
T ss_dssp EES--------SHHHHHHHHH---HHHTTSEEEEEESSHHHHHHHH----HT----TSEEEES-TTSHHHHHHTT-----
T ss_pred EEcC-------CHHHHHHHHH---HHhCCCEEEEEECCcHHHHHHH----hc----ccccccccchhhhHHhhcC-----
Confidence 7777 5799999554 54544 444557877755543 33 2678899999988877651
Q ss_pred hCCCccEEEEccc
Q psy4251 109 KFRSLNILVLNAG 121 (292)
Q Consensus 109 ~~~~id~lI~nAg 121 (292)
..+.|.+|...+
T Consensus 60 -i~~a~~vv~~~~ 71 (116)
T PF02254_consen 60 -IEKADAVVILTD 71 (116)
T ss_dssp -GGCESEEEEESS
T ss_pred -ccccCEEEEccC
Confidence 125677766544
No 440
>TIGR01408 Ube1 ubiquitin-activating enzyme E1. This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.
Probab=85.31 E-value=3.9 Score=42.01 Aligned_cols=81 Identities=10% Similarity=0.053 Sum_probs=53.3
Q ss_pred CCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc--------EEEEcC-------------------HHHHHHHHH
Q psy4251 23 YNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK--------LFYQNC-------------------WDKANDAIS 75 (292)
Q Consensus 23 l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~--------~v~~r~-------------------~~~~~~~~~ 75 (292)
|...+++ |.|+ +|||-++ +..|+..|+ +|+..+ ..|++.+++
T Consensus 417 L~~~kVl-vvGa-------GGlG~e~---lknLal~Gv~~~~~G~i~IvD~D~Ve~SNLnRQfLf~~~dIGk~Ka~vaa~ 485 (1008)
T TIGR01408 417 LQNLNIF-LVGC-------GAIGCEM---LKNFALMGVGTGKKGMITVTDPDLIEKSNLNRQFLFRPHHIGKPKSYTAAD 485 (1008)
T ss_pred HhhCcEE-EECC-------ChHHHHH---HHHHHHhCCCcCCCCeEEEECCCEecccccCcCcCCChhHcCcHHHHHHHH
Confidence 4556777 8898 7999999 555555554 333211 457888888
Q ss_pred HHHhhCCCCceEEEEccCCChHHHHHHH-HHHHHhCCCccEEEEc
Q psy4251 76 KILTEKPSAQCIAMELDLCRLKSVKKFA-EEYQKKFRSLNILVLN 119 (292)
Q Consensus 76 ~l~~~~~~~~~~~~~~Dls~~~~v~~~~-~~~~~~~~~id~lI~n 119 (292)
.+++..|..++..+...++...+ .+. .++ +..+|+||++
T Consensus 486 ~l~~~Np~v~I~~~~~~v~~~~e--~i~~~~f---~~~~dvVi~a 525 (1008)
T TIGR01408 486 ATLKINPQIKIDAHQNRVGPETE--TIFNDEF---YEKLDVVINA 525 (1008)
T ss_pred HHHHHCCCCEEEEEEeecChhhh--hhhhHHH---hhCCCEEEEC
Confidence 88888888888888887764321 121 222 2457888875
No 441
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=85.18 E-value=8 Score=35.30 Aligned_cols=114 Identities=11% Similarity=0.003 Sum_probs=55.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcE--EEE-cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKL--FYQ-NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~--v~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.|++++ |.|+ ++||..++..+.. .|.. ++. ++.++.+.+ +++ +.. ..|..+..+..
T Consensus 185 ~g~~Vl-V~G~-------G~iG~~aiqlAk~---~Ga~~vi~~d~~~~r~~~a-~~~-----Ga~----~v~~~~~~~~~ 243 (393)
T TIGR02819 185 PGSTVY-IAGA-------GPVGLAAAASAQL---LGAAVVIVGDLNPARLAQA-RSF-----GCE----TVDLSKDATLP 243 (393)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHH---cCCceEEEeCCCHHHHHHH-HHc-----CCe----EEecCCcccHH
Confidence 478888 7554 8999999665543 3443 222 455454332 222 332 12332222232
Q ss_pred HHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
+.+.++.. ...+|++|.+.|...... ..+.... ..-...+..+..++. . |+|++++..
T Consensus 244 ~~v~~~~~-~~g~Dvvid~~G~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~--~--G~i~~~G~~ 301 (393)
T TIGR02819 244 EQIEQILG-EPEVDCAVDCVGFEARGH--GHDGKKE-------APATVLNSLMEVTRV--G--GAIGIPGLY 301 (393)
T ss_pred HHHHHHcC-CCCCcEEEECCCCccccc--ccccccc-------chHHHHHHHHHHhhC--C--CEEEEeeec
Confidence 32333221 125999999999642100 1111110 121223444445543 3 999999874
No 442
>KOG1196|consensus
Probab=85.11 E-value=6.9 Score=34.12 Aligned_cols=103 Identities=10% Similarity=0.020 Sum_probs=61.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
+|+|++ |+||+ +..|--+...+. ..|+.|++ .+.++..-+.. .+...... |--++.++.+
T Consensus 153 ~geTv~-VSaAs------GAvGql~GQ~Ak---~~Gc~VVGsaGS~EKv~ll~~----~~G~d~af----NYK~e~~~~~ 214 (343)
T KOG1196|consen 153 KGETVF-VSAAS------GAVGQLVGQFAK---LMGCYVVGSAGSKEKVDLLKT----KFGFDDAF----NYKEESDLSA 214 (343)
T ss_pred CCCEEE-Eeecc------chhHHHHHHHHH---hcCCEEEEecCChhhhhhhHh----ccCCccce----eccCccCHHH
Confidence 468999 99999 888877644433 34567764 56666544333 32222222 2223334555
Q ss_pred HHHHHHHhCC-CccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 102 FAEEYQKKFR-SLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 102 ~~~~~~~~~~-~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
++.+ -++ .||+.+-|.|-. +..+.+-.|+.. |||+..+-++.+
T Consensus 215 aL~r---~~P~GIDiYfeNVGG~------------------------~lDavl~nM~~~----gri~~CG~ISqY 258 (343)
T KOG1196|consen 215 ALKR---CFPEGIDIYFENVGGK------------------------MLDAVLLNMNLH----GRIAVCGMISQY 258 (343)
T ss_pred HHHH---hCCCcceEEEeccCcH------------------------HHHHHHHhhhhc----cceEeeeeehhc
Confidence 5444 344 699999999853 345555556543 899998866544
No 443
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=84.97 E-value=6.2 Score=29.30 Aligned_cols=90 Identities=17% Similarity=0.158 Sum_probs=49.3
Q ss_pred cchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHHHHHHhCC--CccEEEEcc
Q psy4251 43 GLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFR--SLNILVLNA 120 (292)
Q Consensus 43 GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~--~id~lI~nA 120 (292)
|||...+..++.++ ...+++.++.++.+-+ +++ +.... +|-++.+ +.+++++..+ .+|++|.|+
T Consensus 1 ~vG~~a~q~ak~~G-~~vi~~~~~~~k~~~~-~~~-----Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~vid~~ 66 (130)
T PF00107_consen 1 GVGLMAIQLAKAMG-AKVIATDRSEEKLELA-KEL-----GADHV---IDYSDDD----FVEQIRELTGGRGVDVVIDCV 66 (130)
T ss_dssp HHHHHHHHHHHHTT-SEEEEEESSHHHHHHH-HHT-----TESEE---EETTTSS----HHHHHHHHTTTSSEEEEEESS
T ss_pred ChHHHHHHHHHHcC-CEEEEEECCHHHHHHH-Hhh-----ccccc---ccccccc----cccccccccccccceEEEEec
Confidence 57888866655443 3333345777665443 222 22222 3333333 4444444443 699999999
Q ss_pred cccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcc
Q psy4251 121 GVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSES 173 (292)
Q Consensus 121 g~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~ 173 (292)
|.. + ..+..+..+++ . |+++.++...
T Consensus 67 g~~--------~---------------~~~~~~~~l~~--~--G~~v~vg~~~ 92 (130)
T PF00107_consen 67 GSG--------D---------------TLQEAIKLLRP--G--GRIVVVGVYG 92 (130)
T ss_dssp SSH--------H---------------HHHHHHHHEEE--E--EEEEEESSTS
T ss_pred CcH--------H---------------HHHHHHHHhcc--C--CEEEEEEccC
Confidence 932 1 12333334443 3 8999998876
No 444
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=84.90 E-value=5 Score=34.75 Aligned_cols=39 Identities=8% Similarity=0.014 Sum_probs=26.9
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKAND 72 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~ 72 (292)
++++++ |+|++ +++|.+++.. +...|..++. ++.++.+.
T Consensus 144 ~~~~vl-i~g~~------~~~g~~~~~~---~~~~g~~v~~~~~~~~~~~~ 184 (328)
T cd08268 144 PGDSVL-ITAAS------SSVGLAAIQI---ANAAGATVIATTRTSEKRDA 184 (328)
T ss_pred CCCEEE-EecCc------cHHHHHHHHH---HHHcCCEEEEEcCCHHHHHH
Confidence 467787 99999 9999999555 4455666553 56555443
No 445
>KOG0069|consensus
Probab=84.74 E-value=4.6 Score=35.90 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=51.2
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHH------HHHhhCCCCceEEEEccC
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAIS------KILTEKPSAQCIAMELDL 93 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~------~l~~~~~~~~~~~~~~Dl 93 (292)
..++.||++. |-|. +.||.++|+.+..+. .......|.+...++..+ .+.+......+..+.|-+
T Consensus 157 g~~~~gK~vg-ilG~-------G~IG~~ia~rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pL 227 (336)
T KOG0069|consen 157 GYDLEGKTVG-ILGL-------GRIGKAIAKRLKPFG-CVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPL 227 (336)
T ss_pred cccccCCEEE-EecC-------cHHHHHHHHhhhhcc-ceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCC
Confidence 4678999999 9999 799999966655532 222222354433333211 122222234667777666
Q ss_pred CChHHHHHHH-HHHHHhCCCccEEEEcc
Q psy4251 94 CRLKSVKKFA-EEYQKKFRSLNILVLNA 120 (292)
Q Consensus 94 s~~~~v~~~~-~~~~~~~~~id~lI~nA 120 (292)
+ ++.+.++ +++.++.++=-+|||+|
T Consensus 228 t--~~T~~liNk~~~~~mk~g~vlVN~a 253 (336)
T KOG0069|consen 228 T--KETRHLINKKFIEKMKDGAVLVNTA 253 (336)
T ss_pred C--HHHHHHhhHHHHHhcCCCeEEEecc
Confidence 5 4455555 45555555445566655
No 446
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=84.71 E-value=12 Score=31.61 Aligned_cols=75 Identities=8% Similarity=0.122 Sum_probs=51.6
Q ss_pred ccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHH----------HHHHhhCCCCceEEEEccCCChHHHHHHHHHHHHh
Q psy4251 42 TGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAI----------SKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKK 109 (292)
Q Consensus 42 ~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~----------~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~ 109 (292)
-|+|+-.+..+.++...|+.+++ +|++..+++. +++.+..+..+++++-+-..+. +.++++++...
T Consensus 6 iGLGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~i--t~~vi~~la~~ 83 (300)
T COG1023 6 IGLGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDI--TDAVIDDLAPL 83 (300)
T ss_pred eccchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCc--hHHHHHHHHhh
Confidence 37777777779999999999886 7766555543 4555555666777776555443 34677777766
Q ss_pred CCCccEEEE
Q psy4251 110 FRSLNILVL 118 (292)
Q Consensus 110 ~~~id~lI~ 118 (292)
...=|+||-
T Consensus 84 L~~GDivID 92 (300)
T COG1023 84 LSAGDIVID 92 (300)
T ss_pred cCCCCEEEE
Confidence 666788875
No 447
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=84.53 E-value=4.2 Score=35.97 Aligned_cols=31 Identities=13% Similarity=-0.020 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ 64 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~ 64 (292)
.|.+++ |+|++ +++|.++++.+.. .|+.|+.
T Consensus 162 ~g~~vl-I~g~~------g~ig~~~~~~a~~---~G~~v~~ 192 (350)
T cd08248 162 AGKRVL-ILGGS------GGVGTFAIQLLKA---WGAHVTT 192 (350)
T ss_pred CCCEEE-EECCC------ChHHHHHHHHHHH---CCCeEEE
Confidence 488998 99998 9999999666544 4445543
No 448
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=84.50 E-value=13 Score=34.62 Aligned_cols=113 Identities=13% Similarity=0.045 Sum_probs=62.9
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhh-------cCcEE--EEc--CHHHHHHHHHHHHhhC-CCC-ceEEEEccC
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQ-------SSKLF--YQN--CWDKANDAISKILTEK-PSA-QCIAMELDL 93 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~-------~g~~v--~~r--~~~~~~~~~~~l~~~~-~~~-~~~~~~~Dl 93 (292)
+|. ||||+ +-||+.+ +..++. +.+.+ +.. +.++++..+-+|.+.. |-. .+.+. .|
T Consensus 125 ~V~-vtgAa------g~i~Y~l---~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~- 192 (452)
T cd05295 125 QVC-ITNAS------APLCYHL---IPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD- 192 (452)
T ss_pred EEE-EecCc------HHHHHHH---HHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC-
Confidence 466 99999 9999999 665543 11222 224 5778888888887643 211 12222 11
Q ss_pred CChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcC
Q psy4251 94 CRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSS 171 (292)
Q Consensus 94 s~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS 171 (292)
+. +.+...|++|..||....+. +.....++.|.. +.+...+.+.+..++..+|+.+.|
T Consensus 193 -~~-----------ea~~daDvvIitag~prk~G----~~R~DLL~~N~~----Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 193 -LD-----------VAFKDAHVIVLLDDFLIKEG----EDLEGCIRSRVA----ICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred -CH-----------HHhCCCCEEEECCCCCCCcC----CCHHHHHHHHHH----HHHHHHHHHHHhCCCCCeEEEEeC
Confidence 11 12356899999999753221 234445555544 444444455444322246666664
No 449
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=84.45 E-value=3.5 Score=36.46 Aligned_cols=79 Identities=10% Similarity=0.010 Sum_probs=41.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
.|.+++ |+|+ +++|..++..+..+.....+++.++.++.+.+ .++ +... ..|..+.+ .+++.
T Consensus 163 ~g~~vl-V~G~-------G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~~-~~~~~ 224 (339)
T cd08239 163 GRDTVL-VVGA-------GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GADF---VINSGQDD-VQEIR 224 (339)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EEcCCcch-HHHHH
Confidence 378888 8875 79999996665544222122233666665433 333 2221 12333333 33332
Q ss_pred HHHHHhCCCccEEEEcccc
Q psy4251 104 EEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~ 122 (292)
+ +.. ...+|++|.+.|.
T Consensus 225 ~-~~~-~~~~d~vid~~g~ 241 (339)
T cd08239 225 E-LTS-GAGADVAIECSGN 241 (339)
T ss_pred H-HhC-CCCCCEEEECCCC
Confidence 2 211 1269999998874
No 450
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=84.33 E-value=17 Score=32.14 Aligned_cols=118 Identities=11% Similarity=-0.031 Sum_probs=65.1
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC-cEEEEcCHHHHHHHHHHHHhhCCCCc-eEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS-KLFYQNCWDKANDAISKILTEKPSAQ-CIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g-~~v~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~Dls~~~~v~~~~~ 104 (292)
++. |.|+ +.+|..+|..+....... ..++..+.++++..+.+|....+-.. ..+... +|.+.
T Consensus 5 Ki~-IiGa-------G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~------ 68 (312)
T cd05293 5 KVT-VVGV-------GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV------ 68 (312)
T ss_pred EEE-EECC-------CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH------
Confidence 466 7886 799999966544332221 33344667777777777776532111 122211 12221
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcC-CCCcEEEEEcCcccc
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGA-KLFARVVVVSSESHR 175 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~-~~~~~iV~vsS~~~~ 175 (292)
...-|++|.+||....+ ..+ ....+..| .-+.+.+.+.+.+.. + +.++++|.....
T Consensus 69 -----~~~adivvitaG~~~k~-g~~---R~dll~~N----~~i~~~~~~~i~~~~p~--~~vivvsNP~d~ 125 (312)
T cd05293 69 -----TANSKVVIVTAGARQNE-GES---RLDLVQRN----VDIFKGIIPKLVKYSPN--AILLVVSNPVDI 125 (312)
T ss_pred -----hCCCCEEEECCCCCCCC-CCC---HHHHHHHH----HHHHHHHHHHHHHhCCC--cEEEEccChHHH
Confidence 24579999999986432 122 23344444 344555555555443 4 888888876543
No 451
>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.
Probab=84.20 E-value=4 Score=37.72 Aligned_cols=62 Identities=11% Similarity=-0.001 Sum_probs=42.0
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEc----------C---------HHHHHHHHHHHHh
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQN----------C---------WDKANDAISKILT 79 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r----------~---------~~~~~~~~~~l~~ 79 (292)
.|...+|+ |.|+ +|+|-++ +..|+..|+ +|+.. + ..+++.+.+.|.+
T Consensus 17 ~L~~s~Vl-liG~-------gglGsEi---lKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~e 85 (425)
T cd01493 17 ALESAHVC-LLNA-------TATGTEI---LKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQE 85 (425)
T ss_pred HHhhCeEE-EEcC-------cHHHHHH---HHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHH
Confidence 35566788 6787 6999999 555555554 44321 1 4577888888998
Q ss_pred hCCCCceEEEEccCC
Q psy4251 80 EKPSAQCIAMELDLC 94 (292)
Q Consensus 80 ~~~~~~~~~~~~Dls 94 (292)
.+|..++.++.-++.
T Consensus 86 LNp~V~i~~~~e~~~ 100 (425)
T cd01493 86 LNPDVNGSAVEESPE 100 (425)
T ss_pred HCCCCEEEEEecccc
Confidence 888777777765443
No 452
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=84.10 E-value=5.7 Score=34.39 Aligned_cols=39 Identities=13% Similarity=0.041 Sum_probs=26.9
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKAND 72 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~ 72 (292)
.|.+++ |.|++ +++|.++++.+... |+.|+ .++.++.+.
T Consensus 142 ~g~~vl-V~ga~------g~~g~~~~~~a~~~---g~~v~~~~~~~~~~~~ 182 (320)
T cd08243 142 PGDTLL-IRGGT------SSVGLAALKLAKAL---GATVTATTRSPERAAL 182 (320)
T ss_pred CCCEEE-EEcCC------ChHHHHHHHHHHHc---CCEEEEEeCCHHHHHH
Confidence 477888 99999 99999996665544 45554 356555433
No 453
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=83.78 E-value=5.9 Score=35.57 Aligned_cols=79 Identities=13% Similarity=-0.048 Sum_probs=42.3
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCCh-HHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRL-KSVKKF 102 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~ 102 (292)
.|.+++ |.|+ +++|..++..+..++....+++.++.++.+.+ +++ +... ++ |..+. +++.+.
T Consensus 187 ~g~~Vl-V~G~-------g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~~-~i--~~~~~~~~~~~~ 249 (369)
T cd08301 187 KGSTVA-IFGL-------GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVTE-FV--NPKDHDKPVQEV 249 (369)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCce-EE--cccccchhHHHH
Confidence 477888 7775 89999997765543221222334666665433 222 2221 11 22221 233343
Q ss_pred HHHHHHhCCCccEEEEccc
Q psy4251 103 AEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg 121 (292)
+.++.. +.+|+++.+.|
T Consensus 250 v~~~~~--~~~d~vid~~G 266 (369)
T cd08301 250 IAEMTG--GGVDYSFECTG 266 (369)
T ss_pred HHHHhC--CCCCEEEECCC
Confidence 333332 26999999887
No 454
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=83.78 E-value=4.3 Score=34.01 Aligned_cols=72 Identities=8% Similarity=0.073 Sum_probs=49.6
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
.++ |-|+ +-+|..+ +..|.+.|+.|+ .++.++.++..++ ......+++|-++++-++++
T Consensus 2 ~ii-IiG~-------G~vG~~v---a~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~a-- 62 (225)
T COG0569 2 KII-IIGA-------GRVGRSV---ARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEA-- 62 (225)
T ss_pred EEE-EECC-------cHHHHHH---HHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhc--
Confidence 456 7888 6889999 666777776665 4888777664432 12678889999998776665
Q ss_pred HHHHhCCCccEEEEccc
Q psy4251 105 EYQKKFRSLNILVLNAG 121 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg 121 (292)
-....|++|-.-|
T Consensus 63 ----gi~~aD~vva~t~ 75 (225)
T COG0569 63 ----GIDDADAVVAATG 75 (225)
T ss_pred ----CCCcCCEEEEeeC
Confidence 1125688877655
No 455
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=83.71 E-value=2.3 Score=37.11 Aligned_cols=41 Identities=7% Similarity=-0.082 Sum_probs=29.3
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKAND 72 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~ 72 (292)
.+++|++++ |.|. +++|+++|+.+. ..|..|. .|+.++.+.
T Consensus 147 ~~l~gk~v~-IiG~-------G~iG~avA~~L~---~~G~~V~v~~R~~~~~~~ 189 (287)
T TIGR02853 147 FTIHGSNVM-VLGF-------GRTGMTIARTFS---ALGARVFVGARSSADLAR 189 (287)
T ss_pred CCCCCCEEE-EEcC-------hHHHHHHHHHHH---HCCCEEEEEeCCHHHHHH
Confidence 478899999 9999 689999966654 4454544 477665433
No 456
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=83.70 E-value=24 Score=32.76 Aligned_cols=78 Identities=10% Similarity=0.014 Sum_probs=44.1
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE-cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ-NCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
|++++=+..|+ ++....+ +..+...+.++.+ .+.+..+.+.+.+.... -.++.++..|..+...
T Consensus 251 g~~VLDlgaG~------G~~t~~l---a~~~~~~~~v~avDi~~~~l~~~~~n~~~~g-~~~v~~~~~D~~~~~~----- 315 (444)
T PRK14902 251 GDTVLDACAAP------GGKTTHI---AELLKNTGKVVALDIHEHKLKLIEENAKRLG-LTNIETKALDARKVHE----- 315 (444)
T ss_pred CCEEEEeCCCC------CHHHHHH---HHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-CCeEEEEeCCcccccc-----
Confidence 55666233344 5555555 3333234433333 67777777777775542 2358888889876321
Q ss_pred HHHHHhCCCccEEEEccc
Q psy4251 104 EEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg 121 (292)
.+. +.+|.++.++-
T Consensus 316 -~~~---~~fD~Vl~D~P 329 (444)
T PRK14902 316 -KFA---EKFDKILVDAP 329 (444)
T ss_pred -hhc---ccCCEEEEcCC
Confidence 111 46899998764
No 457
>PLN02827 Alcohol dehydrogenase-like
Probab=83.53 E-value=6 Score=35.84 Aligned_cols=77 Identities=9% Similarity=-0.013 Sum_probs=42.3
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc-EEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCCh-HHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-LFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRL-KSV 99 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v 99 (292)
.|.+++ |.|+ +++|..++..+..+ |. .|+ .++.++.+.+ +++ +... + .|..+. ++.
T Consensus 193 ~g~~Vl-V~G~-------G~vG~~~iqlak~~---G~~~vi~~~~~~~~~~~a-~~l-----Ga~~-~--i~~~~~~~~~ 252 (378)
T PLN02827 193 KGSSVV-IFGL-------GTVGLSVAQGAKLR---GASQIIGVDINPEKAEKA-KTF-----GVTD-F--INPNDLSEPI 252 (378)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHc---CCCeEEEECCCHHHHHHH-HHc-----CCcE-E--EcccccchHH
Confidence 478888 8885 79999996665543 44 233 3566554432 333 2221 1 233221 233
Q ss_pred HHHHHHHHHhCCCccEEEEcccc
Q psy4251 100 KKFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 100 ~~~~~~~~~~~~~id~lI~nAg~ 122 (292)
.+.+.++.. +.+|++|.+.|.
T Consensus 253 ~~~v~~~~~--~g~d~vid~~G~ 273 (378)
T PLN02827 253 QQVIKRMTG--GGADYSFECVGD 273 (378)
T ss_pred HHHHHHHhC--CCCCEEEECCCC
Confidence 333333322 269999999884
No 458
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=83.31 E-value=2.1 Score=38.06 Aligned_cols=75 Identities=8% Similarity=-0.061 Sum_probs=46.7
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhh-cCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQ-SSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~-~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
.+++. |-|+ ++.|+..++.+..... ..+.|+.|+.+++++.++++.+.. + +.+.. ..+ +++.+
T Consensus 129 ~~~v~-iiGa-------G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~-g--~~v~~--~~~---~~~av 192 (326)
T TIGR02992 129 SSVVA-IFGA-------GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLL-G--IDVTA--ATD---PRAAM 192 (326)
T ss_pred CcEEE-EECC-------CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhc-C--ceEEE--eCC---HHHHh
Confidence 46677 8898 6889888665443222 345566799999999999886543 1 22222 122 22222
Q ss_pred HHHHHhCCCccEEEEcccc
Q psy4251 104 EEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~ 122 (292)
...|+||++-..
T Consensus 193 -------~~aDiVvtaT~s 204 (326)
T TIGR02992 193 -------SGADIIVTTTPS 204 (326)
T ss_pred -------ccCCEEEEecCC
Confidence 247999987654
No 459
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=83.16 E-value=6.5 Score=35.50 Aligned_cols=79 Identities=15% Similarity=0.090 Sum_probs=40.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH-HHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLK-SVKKF 102 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~-~v~~~ 102 (292)
.|.+++ |.|+ +++|.+++..+..++....+++.++.++.+.+ .++ +.. .+ .+..+.+ +..+.
T Consensus 190 ~g~~Vl-V~G~-------g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~-~~--i~~~~~~~~~~~~ 252 (373)
T cd08299 190 PGSTCA-VFGL-------GGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL-----GAT-EC--INPQDYKKPIQEV 252 (373)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eE--ecccccchhHHHH
Confidence 467788 7764 89999996665544221223334666665444 333 221 11 1222211 12333
Q ss_pred HHHHHHhCCCccEEEEccc
Q psy4251 103 AEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg 121 (292)
+.++.. +.+|+++.+.|
T Consensus 253 v~~~~~--~~~d~vld~~g 269 (373)
T cd08299 253 LTEMTD--GGVDFSFEVIG 269 (373)
T ss_pred HHHHhC--CCCeEEEECCC
Confidence 333322 36999999887
No 460
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=83.06 E-value=6.1 Score=36.20 Aligned_cols=88 Identities=8% Similarity=-0.018 Sum_probs=44.6
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc-EEE--EcCHHHHHHHHHHHHhhC--CCCceEEEEccCCChHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-LFY--QNCWDKANDAISKILTEK--PSAQCIAMELDLCRLKS 98 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-~v~--~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~ 98 (292)
.|.+++ |.|++ +++|..++..+..++ .|. .|+ .++.++.+.+.+.+.... .+.... ..|-.+.++
T Consensus 175 ~g~~Vl-V~G~~------G~vG~~aiq~ak~~G-~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~--~i~~~~~~~ 244 (410)
T cd08238 175 PGGNTA-ILGGA------GPMGLMAIDYAIHGP-IGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL--YVNPATIDD 244 (410)
T ss_pred CCCEEE-EEeCC------CHHHHHHHHHHHhcc-cCCceEEEEcCCHHHHHHHHHhccccccccCceEE--EECCCcccc
Confidence 467888 89988 999999966655442 221 233 467777665443211000 011111 223322223
Q ss_pred HHHHHHHHHHhCCCccEEEEcccc
Q psy4251 99 VKKFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 99 v~~~~~~~~~~~~~id~lI~nAg~ 122 (292)
..+.+.++.. ...+|++|.+.|.
T Consensus 245 ~~~~v~~~t~-g~g~D~vid~~g~ 267 (410)
T cd08238 245 LHATLMELTG-GQGFDDVFVFVPV 267 (410)
T ss_pred HHHHHHHHhC-CCCCCEEEEcCCC
Confidence 3333333321 1258999988763
No 461
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=82.75 E-value=9.5 Score=33.66 Aligned_cols=114 Identities=16% Similarity=0.137 Sum_probs=60.4
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc--EEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK--LFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~--~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~ 102 (292)
++. |+|++ +.+|..+ +..+...+. .++ ..+ +++..+-+|.+..+..++..... + +
T Consensus 2 KI~-IIGaa------G~VG~~~---a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~---~-~----- 60 (310)
T cd01337 2 KVA-VLGAA------GGIGQPL---SLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLG---P-E----- 60 (310)
T ss_pred EEE-EECCC------CHHHHHH---HHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecC---C-C-----
Confidence 456 88998 8999999 444555552 333 334 44444444544321111111100 0 0
Q ss_pred HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhc-CCCCcEEEEEcCcc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKG-AKLFARVVVVSSES 173 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~-~~~~~~iV~vsS~~ 173 (292)
++.+.+..-|++|.+||....+. +.-...++.|.--. +...+.+.+. +. +.|+++|...
T Consensus 61 --~~y~~~~daDivvitaG~~~k~g----~tR~dll~~N~~i~----~~i~~~i~~~~p~--a~vivvtNPv 120 (310)
T cd01337 61 --ELKKALKGADVVVIPAGVPRKPG----MTRDDLFNINAGIV----RDLATAVAKACPK--ALILIISNPV 120 (310)
T ss_pred --chHHhcCCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHH----HHHHHHHHHhCCC--eEEEEccCch
Confidence 11222356899999999853321 23445566665444 4444444433 34 8888888875
No 462
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.
Probab=82.65 E-value=9.2 Score=32.47 Aligned_cols=77 Identities=10% Similarity=-0.038 Sum_probs=43.9
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHh------h--cCcEEEE--cC------------------HHHHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLV------Q--SSKLFYQ--NC------------------WDKANDAISK 76 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~------~--~g~~v~~--r~------------------~~~~~~~~~~ 76 (292)
..+++ |.|+ +|+|-.+++.+.+++ . .|..|.. .| ..|++.++++
T Consensus 11 ~~~V~-vvG~-------GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~Ve~sNLnRQlf~~~dVG~~Ka~v~~~r 82 (244)
T TIGR03736 11 PVSVV-LVGA-------GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDTVSEANVGRQAFYPADVGQNKAIVLVNR 82 (244)
T ss_pred CCeEE-EEcC-------ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCEEccchhhcccCChhHCCcHHHHHHHHH
Confidence 44677 9999 799999966655442 1 1223322 21 3466666666
Q ss_pred HHhhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 77 ILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 77 l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+...+ +.++..+...+...+ + + .+.|++|.|..
T Consensus 83 i~~~~-~~~i~a~~~~~~~~~----~---~----~~~DiVi~avD 115 (244)
T TIGR03736 83 LNQAM-GTDWTAHPERVERSS----T---L----HRPDIVIGCVD 115 (244)
T ss_pred HHhcc-CceEEEEEeeeCchh----h---h----cCCCEEEECCC
Confidence 66544 456666666555411 1 1 24777777654
No 463
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=82.59 E-value=7.7 Score=34.46 Aligned_cols=82 Identities=12% Similarity=0.056 Sum_probs=41.9
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChH---HHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLK---SVK 100 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~---~v~ 100 (292)
.|.+++ |.|++ +++|.++++.+..+......+...+.++.+ .++++ +... ++ |..+.. ...
T Consensus 151 ~g~~vl-I~ga~------~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~-~~~~~-----g~~~-~i--~~~~~~~~~~~~ 214 (352)
T cd08247 151 PDSKVL-VLGGS------TSVGRFAIQLAKNHYNIGTVVGTCSSRSAE-LNKKL-----GADH-FI--DYDAHSGVKLLK 214 (352)
T ss_pred CCCeEE-EECCC------chHHHHHHHHHHhcCCcceEEEEeChhHHH-HHHHh-----CCCE-EE--ecCCCcccchHH
Confidence 477888 99999 999999966655332211223334444432 22222 2222 22 222222 233
Q ss_pred HHHHHHHHhCCCccEEEEcccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~ 122 (292)
.+.+... ..+.+|+++.+.|.
T Consensus 215 ~~~~~~~-~~~~~d~vl~~~g~ 235 (352)
T cd08247 215 PVLENVK-GQGKFDLILDCVGG 235 (352)
T ss_pred HHHHhhc-CCCCceEEEECCCC
Confidence 3333321 12369999998773
No 464
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=82.55 E-value=2 Score=33.61 Aligned_cols=42 Identities=12% Similarity=0.104 Sum_probs=35.1
Q ss_pred EEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhh
Q psy4251 30 LCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTE 80 (292)
Q Consensus 30 lItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~ 80 (292)
|++|++ +-+|+++ +..|-++|+.|+.-+.+.-+.+..++...
T Consensus 2 ~L~G~~------sKvarai---A~~LC~rgv~V~m~~~~~y~~lk~~~~~~ 43 (164)
T PF12076_consen 2 FLTGNT------SKVARAI---ALALCRRGVQVVMLSKERYESLKSEAPEE 43 (164)
T ss_pred eecccc------cHHHHHH---HHHHHhcCCEEEEecHHHHHHHHHHcCHH
Confidence 489999 9999999 88899999999987877777777666443
No 465
>KOG0025|consensus
Probab=82.21 E-value=5.1 Score=34.78 Aligned_cols=83 Identities=12% Similarity=0.042 Sum_probs=55.4
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
|-+++ =-||+ ++.|.++...+..++-..+. ++||.+..+++.++|.+. +..-++-+-.+.+ .-..
T Consensus 161 GD~vI-QNgan------S~VG~~ViQlaka~Giktin-vVRdR~~ieel~~~Lk~l--GA~~ViTeeel~~-----~~~~ 225 (354)
T KOG0025|consen 161 GDSVI-QNGAN------SGVGQAVIQLAKALGIKTIN-VVRDRPNIEELKKQLKSL--GATEVITEEELRD-----RKMK 225 (354)
T ss_pred CCeee-ecCcc------cHHHHHHHHHHHHhCcceEE-EeecCccHHHHHHHHHHc--CCceEecHHHhcc-----hhhh
Confidence 66777 88999 99999997777666444333 358888888888888875 4444443333332 2222
Q ss_pred HHHHhCCCccEEEEcccc
Q psy4251 105 EYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~ 122 (292)
.....++++..-+||.|-
T Consensus 226 k~~~~~~~prLalNcVGG 243 (354)
T KOG0025|consen 226 KFKGDNPRPRLALNCVGG 243 (354)
T ss_pred hhhccCCCceEEEeccCc
Confidence 233356789999999884
No 466
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=82.19 E-value=4.9 Score=35.30 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=41.3
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.+..++|++||+ +++|..++..+..+ |..|+ .++.++.+.+.+ + +... ++ |..+.+..+.
T Consensus 142 ~~~~vlv~~~g~------g~vG~~a~q~a~~~---G~~vi~~~~~~~~~~~~~~-~-----g~~~-~i--~~~~~~~~~~ 203 (324)
T cd08291 142 EGAKAVVHTAAA------SALGRMLVRLCKAD---GIKVINIVRRKEQVDLLKK-I-----GAEY-VL--NSSDPDFLED 203 (324)
T ss_pred CCCcEEEEccCc------cHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHH-c-----CCcE-EE--ECCCccHHHH
Confidence 455566477888 99999996665543 44444 466666544332 2 2222 22 2222222222
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
+ .++.. ...+|+++.+.|
T Consensus 204 v-~~~~~-~~~~d~vid~~g 221 (324)
T cd08291 204 L-KELIA-KLNATIFFDAVG 221 (324)
T ss_pred H-HHHhC-CCCCcEEEECCC
Confidence 2 22211 125999999887
No 467
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=82.14 E-value=5.8 Score=34.56 Aligned_cols=77 Identities=16% Similarity=0.094 Sum_probs=42.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|.+++ |+|++ +++|.+++..+..+ |..|+ .++.++.+.+ +++ +... + .|..+.+..+.
T Consensus 142 ~~~~vl-I~g~~------~~~g~~~~~la~~~---g~~v~~~~~~~~~~~~~-~~~-----g~~~-~--~~~~~~~~~~~ 202 (324)
T cd08244 142 PGDVVL-VTAAA------GGLGSLLVQLAKAA---GATVVGAAGGPAKTALV-RAL-----GADV-A--VDYTRPDWPDQ 202 (324)
T ss_pred CCCEEE-EEcCC------chHHHHHHHHHHHC---CCEEEEEeCCHHHHHHH-HHc-----CCCE-E--EecCCccHHHH
Confidence 366777 99999 99999996665544 45554 3566554433 322 2221 1 23333333333
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
+.+.. ....+|+++.+.|
T Consensus 203 ~~~~~--~~~~~d~vl~~~g 220 (324)
T cd08244 203 VREAL--GGGGVTVVLDGVG 220 (324)
T ss_pred HHHHc--CCCCceEEEECCC
Confidence 22211 1125999999877
No 468
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=81.98 E-value=18 Score=28.80 Aligned_cols=63 Identities=10% Similarity=0.117 Sum_probs=47.2
Q ss_pred hcCcEE--EEcCHHHHHHHHHHHHhhCCCCceEEEE-ccCCChHHHHHHHHHHHHhCCCccEEEEcccc
Q psy4251 57 QSSKLF--YQNCWDKANDAISKILTEKPSAQCIAME-LDLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 57 ~~g~~v--~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~ 122 (292)
..+..| ++.+++.++++.+.+++.+|+.++.... .-. +.++.+++++.|.+. +.|+|+..-|.
T Consensus 46 ~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f-~~~~~~~i~~~I~~~--~pdiv~vglG~ 111 (172)
T PF03808_consen 46 QRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYF-DEEEEEAIINRINAS--GPDIVFVGLGA 111 (172)
T ss_pred HcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCC-ChhhHHHHHHHHHHc--CCCEEEEECCC
Confidence 344444 4578888999999999999877776543 334 777888888888765 57999988775
No 469
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=81.90 E-value=5.4 Score=35.17 Aligned_cols=119 Identities=16% Similarity=0.083 Sum_probs=63.9
Q ss_pred eEEEEcCCCCCCCCcccchhhHHHHHHHHhhcC--cEEEEcCHHHHHHHHHHHHhhCCCC-ceEEEEccCCChHHHHHHH
Q psy4251 27 LAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSS--KLFYQNCWDKANDAISKILTEKPSA-QCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 27 ~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g--~~v~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dls~~~~v~~~~ 103 (292)
.+. |+|+ +++|..+|..+... .-+ ..++...+++++..+.+|....+.. .-..+..| .+.++
T Consensus 2 KVa-viGa-------G~VG~s~a~~l~~~-~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~----- 66 (313)
T COG0039 2 KVA-VIGA-------GNVGSSLAFLLLLQ-GLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED----- 66 (313)
T ss_pred eEE-EECC-------ChHHHHHHHHHhcc-cccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-----
Confidence 466 8898 79999996654222 222 3344566666666666665432211 11222222 22222
Q ss_pred HHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 104 EEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+..-|++|.+||....+. ++. ...+..|.. +.+.+.+.+.+..+ .+.|+.+|...-.
T Consensus 67 ------~~~aDiVvitAG~prKpG-mtR---~DLl~~Na~----I~~~i~~~i~~~~~-d~ivlVvtNPvD~ 123 (313)
T COG0039 67 ------LKGADIVVITAGVPRKPG-MTR---LDLLEKNAK----IVKDIAKAIAKYAP-DAIVLVVTNPVDI 123 (313)
T ss_pred ------hcCCCEEEEeCCCCCCCC-CCH---HHHHHhhHH----HHHHHHHHHHhhCC-CeEEEEecCcHHH
Confidence 245799999999864333 232 334555543 44444445544432 1778887776443
No 470
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=81.65 E-value=16 Score=32.58 Aligned_cols=89 Identities=8% Similarity=0.057 Sum_probs=51.1
Q ss_pred CCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHH---HHHHHhhCCCCceEEEEccCC
Q psy4251 20 ASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDA---ISKILTEKPSAQCIAMELDLC 94 (292)
Q Consensus 20 ~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~---~~~l~~~~~~~~~~~~~~Dls 94 (292)
...|.|+++. |.|. +.||..+|+. +...|..|++ ++.+..... ...+.+......+.++.+-++
T Consensus 141 ~~~l~g~~Vg-IIG~-------G~IG~~vA~~---L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t 209 (330)
T PRK12480 141 SKPVKNMTVA-IIGT-------GRIGAATAKI---YAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPAN 209 (330)
T ss_pred ccccCCCEEE-EECC-------CHHHHHHHHH---HHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCc
Confidence 3578999988 8888 6899999554 5566777764 554332211 112333333456777777665
Q ss_pred ChHHHHHH-HHHHHHhCCCccEEEEcccc
Q psy4251 95 RLKSVKKF-AEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 95 ~~~~v~~~-~~~~~~~~~~id~lI~nAg~ 122 (292)
.. +..+ .++..+..+ -+.++-|.|.
T Consensus 210 ~~--t~~li~~~~l~~mk-~gavlIN~aR 235 (330)
T PRK12480 210 KE--SYHLFDKAMFDHVK-KGAILVNAAR 235 (330)
T ss_pred HH--HHHHHhHHHHhcCC-CCcEEEEcCC
Confidence 42 3333 344444443 4556666654
No 471
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=81.58 E-value=17 Score=28.89 Aligned_cols=76 Identities=9% Similarity=0.047 Sum_probs=50.0
Q ss_pred hhhHHHHHHHHhh-cCcEE--EEcCHHHHHHHHHHHHhhCCCCceEEE-EccCCChHHHHHHHHHHHHhCCCccEEEEcc
Q psy4251 45 KKKDGNLCFDLVQ-SSKLF--YQNCWDKANDAISKILTEKPSAQCIAM-ELDLCRLKSVKKFAEEYQKKFRSLNILVLNA 120 (292)
Q Consensus 45 G~~~a~~~~~l~~-~g~~v--~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dls~~~~v~~~~~~~~~~~~~id~lI~nA 120 (292)
|..+...+.+.+. .+..| ++.+++.++++.+.+++.+|+.++... ..-.. .++..++++.|.+. ..|+|+..-
T Consensus 31 g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~-~~~~~~i~~~I~~~--~pdiv~vgl 107 (171)
T cd06533 31 GSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFG-PEEEEEIIERINAS--GADILFVGL 107 (171)
T ss_pred cHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCC-hhhHHHHHHHHHHc--CCCEEEEEC
Confidence 3334443444443 35444 457888999999999999998887764 34443 34444577777664 589999887
Q ss_pred ccc
Q psy4251 121 GVF 123 (292)
Q Consensus 121 g~~ 123 (292)
|..
T Consensus 108 G~P 110 (171)
T cd06533 108 GAP 110 (171)
T ss_pred CCC
Confidence 753
No 472
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=81.58 E-value=4.2 Score=32.56 Aligned_cols=43 Identities=9% Similarity=-0.045 Sum_probs=29.7
Q ss_pred cCCCCCCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHH
Q psy4251 15 KLLHPASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWD 68 (292)
Q Consensus 15 ~~~~~~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~ 68 (292)
+......++.|+++. |.|. +.||+++|+. +..-|..|++ |+..
T Consensus 26 ~~~~~~~~l~g~tvg-IiG~-------G~IG~~vA~~---l~~fG~~V~~~d~~~~ 70 (178)
T PF02826_consen 26 RERFPGRELRGKTVG-IIGY-------GRIGRAVARR---LKAFGMRVIGYDRSPK 70 (178)
T ss_dssp HTTTTBS-STTSEEE-EEST-------SHHHHHHHHH---HHHTT-EEEEEESSCH
T ss_pred CcCCCccccCCCEEE-EEEE-------cCCcCeEeee---eecCCceeEEecccCC
Confidence 345556889999999 8888 7999999555 4466666664 5543
No 473
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=81.57 E-value=5.7 Score=35.74 Aligned_cols=79 Identities=15% Similarity=0.019 Sum_probs=40.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
.|++++ |.|+ +++|..++..+..++...++++.++.++.+-+ +++ +... + .|..+.+..+. +
T Consensus 191 ~g~~Vl-V~G~-------G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~~-~--i~~~~~~~~~~-i 252 (371)
T cd08281 191 PGQSVA-VVGL-------GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GATA-T--VNAGDPNAVEQ-V 252 (371)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCce-E--eCCCchhHHHH-H
Confidence 477888 8885 79999986655433221222234666665433 333 2221 1 23333222222 2
Q ss_pred HHHHHhCCCccEEEEcccc
Q psy4251 104 EEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~ 122 (292)
.++. .+.+|++|.+.|.
T Consensus 253 ~~~~--~~g~d~vid~~G~ 269 (371)
T cd08281 253 RELT--GGGVDYAFEMAGS 269 (371)
T ss_pred HHHh--CCCCCEEEECCCC
Confidence 2221 1369999998873
No 474
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=81.50 E-value=4.5 Score=35.31 Aligned_cols=39 Identities=10% Similarity=-0.136 Sum_probs=26.5
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKAND 72 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~ 72 (292)
.|.+++ |.|++ +++|.++++.+..+ |+.++ .++.++.+.
T Consensus 139 ~g~~vl-I~g~~------g~ig~~~~~~a~~~---G~~v~~~~~~~~~~~~ 179 (324)
T cd08292 139 PGQWLI-QNAAG------GAVGKLVAMLAAAR---GINVINLVRRDAGVAE 179 (324)
T ss_pred CCCEEE-Ecccc------cHHHHHHHHHHHHC---CCeEEEEecCHHHHHH
Confidence 467788 99999 99999996665544 44444 455555433
No 475
>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional
Probab=81.42 E-value=43 Score=30.67 Aligned_cols=91 Identities=9% Similarity=0.085 Sum_probs=49.4
Q ss_pred EcCHHHHHHHHHHHHhhCCC-CceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhh
Q psy4251 64 QNCWDKANDAISKILTEKPS-AQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNH 142 (292)
Q Consensus 64 ~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~ 142 (292)
..+...++.+.+.+....-. .++.++.+|+-+ +..+.....++.|+||.|.=.+.. +.+. +..-.
T Consensus 250 D~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~------~l~~~~~~~~~fDlVilDPP~f~~----~k~~----l~~~~ 315 (396)
T PRK15128 250 DTSQEALDIARQNVELNKLDLSKAEFVRDDVFK------LLRTYRDRGEKFDVIVMDPPKFVE----NKSQ----LMGAC 315 (396)
T ss_pred ECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHH------HHHHHHhcCCCCCEEEECCCCCCC----ChHH----HHHHH
Confidence 37777777776666543112 368888988742 333333333479999988665422 1111 11112
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcEEEEEcCc
Q psy4251 143 LAHFYLTLQLENALIKGAKLFARVVVVSSE 172 (292)
Q Consensus 143 ~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~ 172 (292)
.+...+.+...+.++ ++ |.++..|++
T Consensus 316 ~~y~~l~~~a~~lLk--~g--G~lv~~scs 341 (396)
T PRK15128 316 RGYKDINMLAIQLLN--PG--GILLTFSCS 341 (396)
T ss_pred HHHHHHHHHHHHHcC--CC--eEEEEEeCC
Confidence 233445555666665 33 677766654
No 476
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=81.11 E-value=3.5 Score=32.88 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=23.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY 63 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~ 63 (292)
.+|.|++++ |.|++ .=+|..+++ .|.+.|+.|.
T Consensus 40 ~~l~gk~vl-ViG~G------~~~G~~~a~---~L~~~g~~V~ 72 (168)
T cd01080 40 IDLAGKKVV-VVGRS------NIVGKPLAA---LLLNRNATVT 72 (168)
T ss_pred CCCCCCEEE-EECCc------HHHHHHHHH---HHhhCCCEEE
Confidence 578999999 99984 335888844 4555665544
No 477
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=81.10 E-value=9.7 Score=32.70 Aligned_cols=39 Identities=13% Similarity=0.003 Sum_probs=26.9
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKAND 72 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~ 72 (292)
.|++++ |.|++ +++|.++++.+..+ |..|++ ++.++.+.
T Consensus 136 ~g~~vl-I~g~~------g~~g~~~~~~a~~~---g~~v~~~~~~~~~~~~ 176 (320)
T cd05286 136 PGDTVL-VHAAA------GGVGLLLTQWAKAL---GATVIGTVSSEEKAEL 176 (320)
T ss_pred CCCEEE-EEcCC------chHHHHHHHHHHHc---CCEEEEEcCCHHHHHH
Confidence 477888 99998 99999996665544 555553 55555443
No 478
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=81.04 E-value=2 Score=31.00 Aligned_cols=33 Identities=9% Similarity=0.017 Sum_probs=21.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ 64 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~ 64 (292)
.+++|+.++ |.|+ |....+.+..|.+.|+.|.+
T Consensus 3 l~l~~~~vl-VvGg----------G~va~~k~~~Ll~~gA~v~v 35 (103)
T PF13241_consen 3 LDLKGKRVL-VVGG----------GPVAARKARLLLEAGAKVTV 35 (103)
T ss_dssp E--TT-EEE-EEEE----------SHHHHHHHHHHCCCTBEEEE
T ss_pred EEcCCCEEE-EECC----------CHHHHHHHHHHHhCCCEEEE
Confidence 468999999 7777 33444457888888888765
No 479
>TIGR01408 Ube1 ubiquitin-activating enzyme E1. This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.
Probab=80.84 E-value=4.8 Score=41.42 Aligned_cols=62 Identities=13% Similarity=0.179 Sum_probs=43.1
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc---EEEEcC-------------------HHHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK---LFYQNC-------------------WDKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~---~v~~r~-------------------~~~~~~~~~~l~ 78 (292)
..|...+|+ |.|. +|+|-++|+ .|+..|+ +|+..+ ..+++.+.++|+
T Consensus 20 ~kL~~s~VL-IiG~-------gGLG~EiaK---nL~laGVg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~ 88 (1008)
T TIGR01408 20 QKMAKSNVL-ISGM-------GGLGLEIAK---NLVLAGVKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLA 88 (1008)
T ss_pred HHHhhCcEE-EECC-------CHHHHHHHH---HHHHcCCCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHH
Confidence 346667788 8898 799999944 4555553 332211 358888999999
Q ss_pred hhCCCCceEEEEccC
Q psy4251 79 TEKPSAQCIAMELDL 93 (292)
Q Consensus 79 ~~~~~~~~~~~~~Dl 93 (292)
+.+|..++..+..++
T Consensus 89 eLNp~V~V~~~~~~l 103 (1008)
T TIGR01408 89 ELNPYVHVSSSSVPF 103 (1008)
T ss_pred HHCCCceEEEecccC
Confidence 998877777776555
No 480
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=80.82 E-value=7.8 Score=34.61 Aligned_cols=37 Identities=8% Similarity=-0.065 Sum_probs=24.7
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCc-EEE--EcCHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSK-LFY--QNCWDKAN 71 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~-~v~--~r~~~~~~ 71 (292)
.|++++ |+| + +++|.+++..+..+ |+ .|+ .++.++.+
T Consensus 177 ~g~~vl-I~g-~------g~vG~~~~~lak~~---G~~~v~~~~~~~~~~~ 216 (361)
T cd08231 177 AGDTVV-VQG-A------GPLGLYAVAAAKLA---GARRVIVIDGSPERLE 216 (361)
T ss_pred CCCEEE-EEC-C------CHHHHHHHHHHHHc---CCCeEEEEcCCHHHHH
Confidence 577888 887 5 89999997765554 44 444 35555543
No 481
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=80.78 E-value=6 Score=29.63 Aligned_cols=74 Identities=9% Similarity=0.080 Sum_probs=47.9
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE---cCH----------------------HHHHHHHHHHHhhCC
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ---NCW----------------------DKANDAISKILTEKP 82 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~---r~~----------------------~~~~~~~~~l~~~~~ 82 (292)
++ |.|++ +-+|+++++.+.+ ..++.++. |+. +.++++.++
T Consensus 3 V~-i~G~~------GrMG~~i~~~i~~--~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~------ 67 (124)
T PF01113_consen 3 VG-IVGAS------GRMGRAIAEAILE--SPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE------ 67 (124)
T ss_dssp EE-EETTT------SHHHHHHHHHHHH--STTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------
T ss_pred EE-EECCC------CHHHHHHHHHHHh--cCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc------
Confidence 55 99999 9999999665443 25666542 443 122222221
Q ss_pred CCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEcccc
Q psy4251 83 SAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 83 ~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg~ 122 (292)
.-+-.|.|.++.+.+.++...+. ++.+|+-+.|+
T Consensus 68 ----~DVvIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~ 101 (124)
T PF01113_consen 68 ----ADVVIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF 101 (124)
T ss_dssp -----SEEEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred ----CCEEEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence 11567999999999999998877 68899988886
No 482
>PRK06153 hypothetical protein; Provisional
Probab=80.76 E-value=9.4 Score=34.69 Aligned_cols=82 Identities=10% Similarity=0.022 Sum_probs=48.9
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC--------------------H--HHHHHHHHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC--------------------W--DKANDAISKIL 78 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~--------------------~--~~~~~~~~~l~ 78 (292)
..|++++++ |.|+ +|+|-.++..+.+++-..++++..+ . .|.+.+.+.+.
T Consensus 172 ~kL~~~~Va-IVG~-------GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~ 243 (393)
T PRK06153 172 AKLEGQRIA-IIGL-------GGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYS 243 (393)
T ss_pred HHHhhCcEE-EEcC-------CccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHH
Confidence 357788899 9999 7999999555554433333443211 1 35555666666
Q ss_pred hhCCCCceEEEEccCCChHHHHHHHHHHHHhCCCccEEEEccc
Q psy4251 79 TEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 79 ~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~id~lI~nAg 121 (292)
+.. ..+..+...+ +.+.+. . +...|++|.|..
T Consensus 244 ~in--~~I~~~~~~I-~~~n~~----~----L~~~DiV~dcvD 275 (393)
T PRK06153 244 NMR--RGIVPHPEYI-DEDNVD----E----LDGFTFVFVCVD 275 (393)
T ss_pred HhC--CeEEEEeecC-CHHHHH----H----hcCCCEEEEcCC
Confidence 553 3566666566 333332 1 245788888876
No 483
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=80.76 E-value=8.5 Score=33.69 Aligned_cols=76 Identities=9% Similarity=0.077 Sum_probs=41.5
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|.+++ |.|++ +++|.+++..+.. .|..|+ .++.++.+.+ +++ +... ++ |..+ .+..+
T Consensus 139 ~~~~vl-I~ga~------g~ig~~~~~~a~~---~g~~v~~~~~~~~~~~~~-~~~-----g~~~-v~--~~~~-~~~~~ 198 (329)
T cd08250 139 SGETVL-VTAAA------GGTGQFAVQLAKL---AGCHVIGTCSSDEKAEFL-KSL-----GCDR-PI--NYKT-EDLGE 198 (329)
T ss_pred CCCEEE-EEeCc------cHHHHHHHHHHHH---cCCeEEEEeCcHHHHHHH-HHc-----CCce-EE--eCCC-ccHHH
Confidence 467788 99999 9999999665554 455454 3555554333 222 2211 12 2222 22222
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
.+..... ..+|+++++.|
T Consensus 199 ~~~~~~~--~~vd~v~~~~g 216 (329)
T cd08250 199 VLKKEYP--KGVDVVYESVG 216 (329)
T ss_pred HHHHhcC--CCCeEEEECCc
Confidence 2222221 35999998876
No 484
>KOG2336|consensus
Probab=80.54 E-value=13 Score=32.07 Aligned_cols=102 Identities=11% Similarity=0.194 Sum_probs=69.4
Q ss_pred CCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEc---------------C---HHHHHHHHHHHHhhCCC
Q psy4251 22 TYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQN---------------C---WDKANDAISKILTEKPS 83 (292)
Q Consensus 22 ~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r---------------~---~~~~~~~~~~l~~~~~~ 83 (292)
.++-+.+. |.|. +|.|..+|..+-+.+--...++.- + ..+.+.+.+-|....|.
T Consensus 79 rIR~~aVA-iVGv-------GGVGSV~AeMLTRCGIGkLlLfDYDkVElANMNRLFf~P~QaGlsKv~AA~~TL~~iNPD 150 (422)
T KOG2336|consen 79 RIREFAVA-IVGV-------GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPDQAGLSKVDAAVQTLAEINPD 150 (422)
T ss_pred HHhhheeE-EEec-------CchhHHHHHHHHhcCcceEEEeecchhhhhcccccccCcccccchHHHHHHHHHHhcCCC
Confidence 35567777 8888 699999966544432222223211 1 34566677777888888
Q ss_pred CceEEEEccCCChHHHHHHHHHHHHhC---C-CccEEEEcccccCCCCCCCCcchhhhhhhhh
Q psy4251 84 AQCIAMELDLCRLKSVKKFAEEYQKKF---R-SLNILVLNAGVFGLGFSHTEDGFETTFQVNH 142 (292)
Q Consensus 84 ~~~~~~~~Dls~~~~v~~~~~~~~~~~---~-~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~ 142 (292)
..+.....+++..+..+.|.+.|.+.- | ++|.|..|.. .|+.-+++|.
T Consensus 151 V~iE~hn~NITTvenFd~F~~~is~g~~~~gkpvDLVLSCVD-----------NfEARMavN~ 202 (422)
T KOG2336|consen 151 VVIEVHNYNITTVENFDTFTDRISNGSLCPGKPVDLVLSCVD-----------NFEARMAVNQ 202 (422)
T ss_pred eEEEEeecceeeehhHHHHHHHhhcCCCCCCCcceEEeeehh-----------hHHHHHHHHH
Confidence 888999999999999999999987642 2 4888887754 4566666663
No 485
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=80.51 E-value=6.1 Score=35.49 Aligned_cols=72 Identities=14% Similarity=0.152 Sum_probs=39.0
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|++++ |.|+ +++|..++..+..+ |..++ ..+.++..+.++++ +.... .|-.+.+.+.+
T Consensus 183 ~g~~Vl-V~G~-------G~vG~~avq~Ak~~---Ga~vi~~~~~~~~~~~~~~~~-----Ga~~v---i~~~~~~~~~~ 243 (360)
T PLN02586 183 PGKHLG-VAGL-------GGLGHVAVKIGKAF---GLKVTVISSSSNKEDEAINRL-----GADSF---LVSTDPEKMKA 243 (360)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHC---CCEEEEEeCCcchhhhHHHhC-----CCcEE---EcCCCHHHHHh
Confidence 578888 8775 89999996665543 44444 34444443333332 22211 12223222222
Q ss_pred HHHHHHHhCCCccEEEEccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAG 121 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg 121 (292)
..+.+|++|.+.|
T Consensus 244 -------~~~~~D~vid~~g 256 (360)
T PLN02586 244 -------AIGTMDYIIDTVS 256 (360)
T ss_pred -------hcCCCCEEEECCC
Confidence 1235899999887
No 486
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=80.42 E-value=7.7 Score=31.97 Aligned_cols=35 Identities=9% Similarity=0.129 Sum_probs=23.7
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC 66 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~ 66 (292)
.+++||.++ |.|| +.+|..- +..|...|+.|.+-+
T Consensus 5 l~l~gk~vl-VvGg-------G~va~rk---~~~Ll~~ga~VtVvs 39 (205)
T TIGR01470 5 ANLEGRAVL-VVGG-------GDVALRK---ARLLLKAGAQLRVIA 39 (205)
T ss_pred EEcCCCeEE-EECc-------CHHHHHH---HHHHHHCCCEEEEEc
Confidence 468899999 7777 3455554 566777887776533
No 487
>PRK04148 hypothetical protein; Provisional
Probab=80.28 E-value=6.5 Score=30.05 Aligned_cols=54 Identities=15% Similarity=-0.125 Sum_probs=34.1
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEE--cCHHHHHHHHHHHHhhCCCCceEEEEccCCChHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQ--NCWDKANDAISKILTEKPSAQCIAMELDLCRLKS 98 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~ 98 (292)
++.++ +.|. |-|..+ +..|.+.|+.|++ .++...+. .++. .+.++..|+.+++-
T Consensus 17 ~~kil-eIG~--------GfG~~v---A~~L~~~G~~ViaIDi~~~aV~~----a~~~----~~~~v~dDlf~p~~ 72 (134)
T PRK04148 17 NKKIV-ELGI--------GFYFKV---AKKLKESGFDVIVIDINEKAVEK----AKKL----GLNAFVDDLFNPNL 72 (134)
T ss_pred CCEEE-EEEe--------cCCHHH---HHHHHHCCCEEEEEECCHHHHHH----HHHh----CCeEEECcCCCCCH
Confidence 45666 6664 357777 5566678888886 44554333 3322 46788899987653
No 488
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=80.25 E-value=8.6 Score=34.51 Aligned_cols=80 Identities=14% Similarity=-0.056 Sum_probs=40.8
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCCh-HHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRL-KSVKKF 102 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~ 102 (292)
.|.+++ |.|+ +++|..++..+..++....+++.++.++.+.+ +++ +... + .|-.+. ..+.+.
T Consensus 184 ~g~~vl-V~G~-------g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~-----ga~~-~--i~~~~~~~~~~~~ 246 (365)
T cd08277 184 PGSTVA-VFGL-------GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF-----GATD-F--INPKDSDKPVSEV 246 (365)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCc-E--eccccccchHHHH
Confidence 478888 7774 89999996665544221222234666554433 333 2211 1 122211 112222
Q ss_pred HHHHHHhCCCccEEEEcccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~ 122 (292)
+.+... +.+|++|.+.|.
T Consensus 247 ~~~~~~--~g~d~vid~~g~ 264 (365)
T cd08277 247 IREMTG--GGVDYSFECTGN 264 (365)
T ss_pred HHHHhC--CCCCEEEECCCC
Confidence 333322 369999998873
No 489
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=80.15 E-value=2.5 Score=33.28 Aligned_cols=39 Identities=5% Similarity=0.028 Sum_probs=27.0
Q ss_pred CCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHH
Q psy4251 21 STYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKA 70 (292)
Q Consensus 21 ~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~ 70 (292)
.+|+||.++ |.|| +.+|... +..|...|+.|.+-+++..
T Consensus 9 l~l~~~~vl-VvGG-------G~va~rk---a~~Ll~~ga~V~VIsp~~~ 47 (157)
T PRK06719 9 FNLHNKVVV-IIGG-------GKIAYRK---ASGLKDTGAFVTVVSPEIC 47 (157)
T ss_pred EEcCCCEEE-EECC-------CHHHHHH---HHHHHhCCCEEEEEcCccC
Confidence 678999999 8887 4555555 6667778877765444333
No 490
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=80.10 E-value=5.7 Score=35.52 Aligned_cols=77 Identities=10% Similarity=-0.033 Sum_probs=40.6
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcE-EE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKL-FY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVK 100 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~-v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~ 100 (292)
.|++++ |.|+ +++|..++..+..+ |+. |+ .++.++.+.+ +++ +... + .|..+.+..+
T Consensus 176 ~g~~Vl-V~G~-------g~vG~~a~~~ak~~---G~~~Vi~~~~~~~~~~~~-~~~-----Ga~~-~--i~~~~~~~~~ 235 (358)
T TIGR03451 176 RGDSVA-VIGC-------GGVGDAAIAGAALA---GASKIIAVDIDDRKLEWA-REF-----GATH-T--VNSSGTDPVE 235 (358)
T ss_pred CCCEEE-EECC-------CHHHHHHHHHHHHc---CCCeEEEEcCCHHHHHHH-HHc-----CCce-E--EcCCCcCHHH
Confidence 477888 8875 89999996665543 542 43 3666655443 222 2221 1 2333322222
Q ss_pred HHHHHHHHhCCCccEEEEcccc
Q psy4251 101 KFAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 101 ~~~~~~~~~~~~id~lI~nAg~ 122 (292)
.+ .+... ...+|++|.+.|.
T Consensus 236 ~i-~~~~~-~~g~d~vid~~g~ 255 (358)
T TIGR03451 236 AI-RALTG-GFGADVVIDAVGR 255 (358)
T ss_pred HH-HHHhC-CCCCCEEEECCCC
Confidence 22 22211 1258999998883
No 491
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=80.10 E-value=7.4 Score=33.54 Aligned_cols=39 Identities=13% Similarity=0.022 Sum_probs=26.5
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKAND 72 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~ 72 (292)
.|++++ |+|++ +++|.+++..+.. .|+.|+ .++.++.+.
T Consensus 139 ~~~~vl-i~g~~------~~~g~~~~~~a~~---~g~~v~~~~~~~~~~~~ 179 (323)
T cd08241 139 PGETVL-VLGAA------GGVGLAAVQLAKA---LGARVIAAASSEEKLAL 179 (323)
T ss_pred CCCEEE-EEcCC------chHHHHHHHHHHH---hCCEEEEEeCCHHHHHH
Confidence 467888 99998 9999999666554 444444 356555443
No 492
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=79.85 E-value=6.9 Score=33.49 Aligned_cols=114 Identities=15% Similarity=0.155 Sum_probs=58.9
Q ss_pred EcCCCCCCCCcccchhhHHHHHHHHhhcC----cEE--EEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHHH
Q psy4251 31 CTGDMEFYPRYTGLKKKDGNLCFDLVQSS----KLF--YQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAE 104 (292)
Q Consensus 31 ItGa~~~~~~~~GiG~~~a~~~~~l~~~g----~~v--~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~ 104 (292)
|.||+ +.+|..+ +..++..+ ..| +..++++++....++++..... ....++-..+. .+
T Consensus 3 IIGag------G~vG~~i---a~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~----~~~~i~~~~d~---~~ 66 (263)
T cd00650 3 VIGAG------GNVGPAL---AFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL----ADIKVSITDDP---YE 66 (263)
T ss_pred EECCC------ChHHHHH---HHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc----cCcEEEECCch---HH
Confidence 77887 7799999 44455555 333 3466777777777776542111 01111111111 11
Q ss_pred HHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhc-CCCCcEEEEEcCccc
Q psy4251 105 EYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKG-AKLFARVVVVSSESH 174 (292)
Q Consensus 105 ~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~-~~~~~~iV~vsS~~~ 174 (292)
. +..-|++|..+|....+. ++-...+.. ..-+.+.+.+.+.+. +. +.++++|....
T Consensus 67 ~----~~~aDiVv~t~~~~~~~g----~~r~~~~~~----n~~i~~~i~~~i~~~~p~--a~~i~~tNP~d 123 (263)
T cd00650 67 A----FKDADVVIITAGVGRKPG----MGRLDLLKR----NVPIVKEIGDNIEKYSPD--AWIIVVSNPVD 123 (263)
T ss_pred H----hCCCCEEEECCCCCCCcC----CCHHHHHHH----HHHHHHHHHHHHHHHCCC--eEEEEecCcHH
Confidence 1 245799999999764321 111222222 333445555555443 33 77777766543
No 493
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=79.85 E-value=21 Score=32.31 Aligned_cols=81 Identities=12% Similarity=0.004 Sum_probs=40.1
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFA 103 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~ 103 (292)
.|.+++ |.| + +++|..++..+........+.+.++.++.+.+.+ + . +. .+ .+..+.++..+-+
T Consensus 184 ~g~~Vl-V~g-~------G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~-~---~-~~--~v--i~~~~~~~~~~~l 246 (386)
T cd08283 184 PGDTVA-VWG-C------GPVGLFAARSAKLLGAERVIAIDRVPERLEMARS-H---L-GA--ET--INFEEVDDVVEAL 246 (386)
T ss_pred CCCEEE-EEC-C------CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-c---C-Cc--EE--EcCCcchHHHHHH
Confidence 467787 776 4 7999999766554422112223366655443332 1 1 11 22 2333222222222
Q ss_pred HHHHHhCCCccEEEEcccc
Q psy4251 104 EEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 104 ~~~~~~~~~id~lI~nAg~ 122 (292)
.++.. ...+|+++.+.|.
T Consensus 247 ~~~~~-~~~~D~vld~vg~ 264 (386)
T cd08283 247 RELTG-GRGPDVCIDAVGM 264 (386)
T ss_pred HHHcC-CCCCCEEEECCCC
Confidence 22211 1259999998763
No 494
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=79.35 E-value=5.5 Score=35.38 Aligned_cols=88 Identities=16% Similarity=0.142 Sum_probs=53.7
Q ss_pred CCCCCCCCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcC----HHHHH-------HHHHHHHhhCCCCce
Q psy4251 18 HPASTYNGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNC----WDKAN-------DAISKILTEKPSAQC 86 (292)
Q Consensus 18 ~~~~~l~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~----~~~~~-------~~~~~l~~~~~~~~~ 86 (292)
.+...|.|||+- |.|. +.||..+ +..+..-|..|++-| .+... ...+++.+ ...+
T Consensus 135 ~~g~el~gkTvG-IiG~-------G~IG~~v---a~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~---~sDi 200 (324)
T COG0111 135 FRGTELAGKTVG-IIGL-------GRIGRAV---AKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLA---EADI 200 (324)
T ss_pred cccccccCCEEE-EECC-------CHHHHHH---HHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHh---hCCE
Confidence 344578899999 9998 7999999 555667788887622 21111 11333333 3478
Q ss_pred EEEEccCCChHHHHHHHH-HHHHhCCCccEEEEccc
Q psy4251 87 IAMELDLCRLKSVKKFAE-EYQKKFRSLNILVLNAG 121 (292)
Q Consensus 87 ~~~~~Dls~~~~v~~~~~-~~~~~~~~id~lI~nAg 121 (292)
..+.+=+++. .+.++. +..+++++=-++||+|-
T Consensus 201 v~lh~PlT~e--T~g~i~~~~~a~MK~gailIN~aR 234 (324)
T COG0111 201 LTLHLPLTPE--TRGLINAEELAKMKPGAILINAAR 234 (324)
T ss_pred EEEcCCCCcc--hhcccCHHHHhhCCCCeEEEECCC
Confidence 8888888764 556652 22233433337777663
No 495
>COG1660 Predicted P-loop-containing kinase [General function prediction only]
Probab=79.34 E-value=24 Score=30.29 Aligned_cols=85 Identities=16% Similarity=0.105 Sum_probs=50.1
Q ss_pred EEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEc-CHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH---HH
Q psy4251 28 AILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQN-CWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK---FA 103 (292)
Q Consensus 28 ~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~---~~ 103 (292)
.|||||= ||-|+.+|-.. |-..|+-.+.. -.+-+.+.++-+.....+..=..+.+|+.+.+...+ .+
T Consensus 3 lvIVTGl-------SGAGKsvAl~~--lEDlGyycvDNLPp~Llp~~~~~~~~~~~~~~kvAv~iDiRs~~~~~~l~~~l 73 (286)
T COG1660 3 LVIVTGL-------SGAGKSVALRV--LEDLGYYCVDNLPPQLLPKLADLMLTLESRITKVAVVIDVRSREFFGDLEEVL 73 (286)
T ss_pred EEEEecC-------CCCcHHHHHHH--HHhcCeeeecCCCHHHHHHHHHHHhhcccCCceEEEEEecccchhHHHHHHHH
Confidence 3449998 79999995432 22346655532 234444444433222223456678899988665544 45
Q ss_pred HHHHHhCC-CccEEEEccc
Q psy4251 104 EEYQKKFR-SLNILVLNAG 121 (292)
Q Consensus 104 ~~~~~~~~-~id~lI~nAg 121 (292)
+++++..+ .+++++.-|.
T Consensus 74 ~~l~~~~~~~~~iLFLeA~ 92 (286)
T COG1660 74 DELKDNGDIDPRVLFLEAD 92 (286)
T ss_pred HHHHhcCCCCceEEEEECc
Confidence 55555432 4889998886
No 496
>PTZ00117 malate dehydrogenase; Provisional
Probab=79.30 E-value=23 Score=31.40 Aligned_cols=121 Identities=12% Similarity=0.035 Sum_probs=59.8
Q ss_pred CceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHHHhhCC--CCceEEEEccCCChHHHHHH
Q psy4251 25 GCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKILTEKP--SAQCIAMELDLCRLKSVKKF 102 (292)
Q Consensus 25 g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~ 102 (292)
.+++. |.|| +.+|..++..+....-....++..+.++++...-++....+ +.... +.+ -++.+.
T Consensus 5 ~~KI~-IIGa-------G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~---- 70 (319)
T PTZ00117 5 RKKIS-MIGA-------GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYED---- 70 (319)
T ss_pred CcEEE-EECC-------CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHH----
Confidence 45677 8887 67899986554333211233344555544433333322211 11111 111 012111
Q ss_pred HHHHHHhCCCccEEEEcccccCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhcCCCCcEEEEEcCcccc
Q psy4251 103 AEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175 (292)
Q Consensus 103 ~~~~~~~~~~id~lI~nAg~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ll~~l~~~~~~~~~iV~vsS~~~~ 175 (292)
+..-|++|.++|....+. .+ ....+..|. -+.+.+.+.+.+..+ .+.++++|.....
T Consensus 71 -------l~~ADiVVitag~~~~~g-~~---r~dll~~n~----~i~~~i~~~i~~~~p-~a~vivvsNP~di 127 (319)
T PTZ00117 71 -------IKDSDVVVITAGVQRKEE-MT---REDLLTING----KIMKSVAESVKKYCP-NAFVICVTNPLDC 127 (319)
T ss_pred -------hCCCCEEEECCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHHCC-CeEEEEecChHHH
Confidence 134699999999753221 12 344555555 455666666655432 1778888776543
No 497
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=79.24 E-value=7.1 Score=35.35 Aligned_cols=73 Identities=14% Similarity=0.160 Sum_probs=39.5
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEE--EcCHHHHHHHHHHHHhhCCCCceEEEEccCCChHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFY--QNCWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKK 101 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~ 101 (292)
.|++++ |.|+ +++|..++..+..+ |+.|+ .++.++..+.++++ +.... .|..+.+.+.
T Consensus 178 ~g~~Vl-V~G~-------G~vG~~avq~Ak~~---Ga~Vi~~~~~~~~~~~~a~~l-----Ga~~~---i~~~~~~~v~- 237 (375)
T PLN02178 178 SGKRLG-VNGL-------GGLGHIAVKIGKAF---GLRVTVISRSSEKEREAIDRL-----GADSF---LVTTDSQKMK- 237 (375)
T ss_pred CCCEEE-EEcc-------cHHHHHHHHHHHHc---CCeEEEEeCChHHhHHHHHhC-----CCcEE---EcCcCHHHHH-
Confidence 477888 8886 79999996665544 44443 34544433333332 22211 1222322222
Q ss_pred HHHHHHHhCCCccEEEEcccc
Q psy4251 102 FAEEYQKKFRSLNILVLNAGV 122 (292)
Q Consensus 102 ~~~~~~~~~~~id~lI~nAg~ 122 (292)
+..+.+|+++.+.|.
T Consensus 238 ------~~~~~~D~vid~~G~ 252 (375)
T PLN02178 238 ------EAVGTMDFIIDTVSA 252 (375)
T ss_pred ------HhhCCCcEEEECCCc
Confidence 112468999998873
No 498
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=79.15 E-value=13 Score=32.33 Aligned_cols=42 Identities=10% Similarity=0.134 Sum_probs=27.1
Q ss_pred CCceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHH
Q psy4251 24 NGCLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDA 73 (292)
Q Consensus 24 ~g~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~ 73 (292)
.|.+++ |.|++ +++|.++++.+..++ ....++.++.++.+.+
T Consensus 140 ~~~~vl-I~ga~------g~~g~~~~~~a~~~g-~~v~~~~~~~~~~~~~ 181 (334)
T PTZ00354 140 KGQSVL-IHAGA------SGVGTAAAQLAEKYG-AATIITTSSEEKVDFC 181 (334)
T ss_pred CCCEEE-EEcCC------chHHHHHHHHHHHcC-CEEEEEeCCHHHHHHH
Confidence 467788 99999 999999966655442 2223334666554443
No 499
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=78.80 E-value=16 Score=29.73 Aligned_cols=31 Identities=3% Similarity=-0.203 Sum_probs=19.0
Q ss_pred HHHHHHHhHhcCCCeEEEEecCCccc-ccccc
Q psy4251 212 LFGEKLATLWYKYKIALSSRHCCWKI-TVSKK 242 (292)
Q Consensus 212 ~~~~~la~~~~~~gi~v~~v~PG~v~-~~~~~ 242 (292)
..-+++..--+-.|.+|..|..|.=. ++-..
T Consensus 120 ~~~~A~~aG~k~sG~TVH~V~e~vD~GpII~Q 151 (200)
T COG0299 120 AHEQALEAGVKVSGCTVHFVTEGVDTGPIIAQ 151 (200)
T ss_pred HHHHHHHcCCCccCcEEEEEccCCCCCCeEEE
Confidence 33444444445568999998887555 55544
No 500
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=78.76 E-value=12 Score=32.60 Aligned_cols=43 Identities=9% Similarity=-0.119 Sum_probs=22.2
Q ss_pred ceEEEEcCCCCCCCCcccchhhHHHHHHHHhhcCcEEEEcCHHHHHHHHHHH
Q psy4251 26 CLAILCTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKANDAISKI 77 (292)
Q Consensus 26 ~~~vlItGa~~~~~~~~GiG~~~a~~~~~l~~~g~~v~~r~~~~~~~~~~~l 77 (292)
|.|++|.||. +|.=+++ +....-..++++--|.+-.+-.++.+
T Consensus 78 k~VLiiGgGd------G~tlRev---lkh~~ve~i~~VEID~~Vi~~ar~~l 120 (282)
T COG0421 78 KRVLIIGGGD------GGTLREV---LKHLPVERITMVEIDPAVIELARKYL 120 (282)
T ss_pred CeEEEECCCc------cHHHHHH---HhcCCcceEEEEEcCHHHHHHHHHhc
Confidence 5777566666 5554554 44343445555545554444433333
Done!