RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4251
(292 letters)
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 63.8 bits (155), Expect = 2e-12
Identities = 16/106 (15%), Positives = 39/106 (36%), Gaps = 2/106 (1%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG- 126
+ ++ + I DL + + + + ++I + NAG+
Sbjct: 45 GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT 104
Query: 127 -FSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSS 171
S + G++ F VN LA T + ++ + ++ ++S
Sbjct: 105 LLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS 150
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 275
Score = 60.3 bits (145), Expect = 3e-11
Identities = 36/196 (18%), Positives = 65/196 (33%), Gaps = 37/196 (18%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGF 127
+ A+ ++ E S +LD+ L+S++ + +K++ L++LV NAG+
Sbjct: 39 TRGQAAVQQLQAEGLSP--RFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA 96
Query: 128 SH--TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS 185
E T + N + L+ K RVV VSS + +
Sbjct: 97 DPTPFHIQAEVTMKTNFFGTRDVC----TELLPLIKPQGRVVNVSSIMSVRALKSCSPEL 152
Query: 186 KSVLSVENYSDF----------------------WAMTAYNDTKLCNVLFGEKLATLWYK 223
+ E ++ W +AY TK+ + A
Sbjct: 153 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHA----- 207
Query: 224 YKIALSSRHCCWKITV 239
LS + KI +
Sbjct: 208 --RKLSEQRKGDKILL 221
>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase
{Azoarcus sp. ebn1 [TaxId: 76114]}
Length = 247
Score = 55.7 bits (134), Expect = 9e-10
Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 66 CWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGL 125
D ++ + + ++ D+ + V+ F ++ F +ILV NAG++ L
Sbjct: 34 IADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPL 93
Query: 126 G--FSHTEDGFETTFQVNHLAHFYLT 149
T + ++ TF++N + F +
Sbjct: 94 IPFDELTFEQWKKTFEINVDSGFLMA 119
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 264
Score = 55.0 bits (132), Expect = 2e-09
Identities = 26/166 (15%), Positives = 48/166 (28%), Gaps = 28/166 (16%)
Query: 68 DKANDAISKILTEKPSAQ-CIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVF--- 123
++ + +IL S Q ++ D+ + KF L+ILV NAG
Sbjct: 40 ERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPD 99
Query: 124 ---GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYIT 180
G + + + ++ T +N + LT + + T
Sbjct: 100 SQSKTGTAQSIESYDATLNLNLRSVIALTKKA---------------------VPHLSST 138
Query: 181 KDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKI 226
K I Y+ K + A ++ I
Sbjct: 139 KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGI 184
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI
{Human (Homo sapiens) [TaxId: 9606]}
Length = 244
Score = 54.2 bits (130), Expect = 2e-09
Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 25/161 (15%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNA--GVFGL 125
+ +K + A+ +D + + A++ + + ++ILV NA
Sbjct: 42 HGLEETAAKC--KGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSD 99
Query: 126 GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS 185
F+ + E TF+VN LAHF+ T A+ K +V V+S + S
Sbjct: 100 LFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNH--GHIVTVASAAGHVS-------- 149
Query: 186 KSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKI 226
+ AY +K V F + L +I
Sbjct: 150 -----------VPFLLAYCSSKFAAVGFHKTLTDELAALQI 179
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus
thermophilus [TaxId: 274]}
Length = 248
Score = 53.3 bits (128), Expect = 5e-09
Identities = 26/143 (18%), Positives = 43/143 (30%), Gaps = 23/143 (16%)
Query: 86 CIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFETTFQVNHL 143
++DL + +F EE +++LV NA + G + + +VN
Sbjct: 50 GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT 109
Query: 144 AHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAY 203
A +L+ + I V SV+ AY
Sbjct: 110 APMHLS---------------ALAAREMRKVGGGAIVN------VASVQGLFAEQENAAY 148
Query: 204 NDTKLCNVLFGEKLATLWYKYKI 226
N +K V LA +I
Sbjct: 149 NASKGGLVNLTRSLALDLAPLRI 171
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase,
PGDH {Human (Homo sapiens) [TaxId: 9606]}
Length = 254
Score = 53.5 bits (128), Expect = 6e-09
Identities = 21/134 (15%), Positives = 51/134 (38%), Gaps = 7/134 (5%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGF 127
+ + + + + + ++ D+ + ++ + F L+ILV NAGV
Sbjct: 38 EAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV----- 92
Query: 128 SHTEDGFETTFQVNHLAHFYLTLQLENALIK-GAKLFARVVVVSSESHRYSYITKDTISK 186
+ E +E T Q+N ++ T + + K ++ +SS + +
Sbjct: 93 -NNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA 151
Query: 187 SVLSVENYSDFWAM 200
S + ++ A+
Sbjct: 152 SKHGIVGFTRSAAL 165
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase
{Comamonas testosteroni [TaxId: 285]}
Length = 253
Score = 51.9 bits (124), Expect = 2e-08
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 5/132 (3%)
Query: 71 NDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FS 128
N+A + L + + + + D+ Q++ +LN+LV NAG+ G +
Sbjct: 39 NEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMET 98
Query: 129 HTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSV 188
+ F ++N + F Q + + ++ ++S S S S
Sbjct: 99 GRLEDFSRLLKINTESVFIGCQQ---GIAAMKETGGSIINMASVSSWLPIEQYAGYSASK 155
Query: 189 LSVENYSDFWAM 200
+V + A+
Sbjct: 156 AAVSALTRAAAL 167
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 272
Score = 49.6 bits (118), Expect = 1e-07
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Query: 68 DKANDAISKILTEKPSA-QCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG 126
++ + IL S Q ++ D+ + K+F +++LV NAG
Sbjct: 40 ERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPD 99
Query: 127 ------FSHTEDGFETTFQVNHLAHFYLT 149
D + T ++N A +T
Sbjct: 100 AFGTTGTDQGIDIYHKTLKLNLQAVIEMT 128
>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of
estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 302
Score = 48.1 bits (114), Expect = 4e-07
Identities = 21/151 (13%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 78 LTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG--FSHTEDGFE 135
+ E+ + + +++ +K + F ++++V NAG+ +++ ++
Sbjct: 56 VVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD 115
Query: 136 TTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYS 195
+V+ F +T + + K R+++ +S S Y
Sbjct: 116 IIQRVHLRGSFQVTRAAWDHMKKQNY--GRIIMTASASGIYGN----------------- 156
Query: 196 DFWAMTAYNDTKLCNVLFGEKLATLWYKYKI 226
+ Y+ KL + L K I
Sbjct: 157 --FGQANYSAAKLGLLGLANTLVIEGRKNNI 185
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 259
Score = 48.1 bits (114), Expect = 4e-07
Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFR-SLNILVLNAGVFGLG 126
+ N+ +SK +K Q D +K + F L+IL+ N G
Sbjct: 43 YELNECLSKW--QKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSK 100
Query: 127 --FSHTEDGFETTFQVNHLAHFYLT 149
+T + F N + ++L+
Sbjct: 101 PTLDYTAEDFSFHISTNLESAYHLS 125
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 274
Score = 47.7 bits (113), Expect = 4e-07
Identities = 26/164 (15%), Positives = 46/164 (28%), Gaps = 26/164 (15%)
Query: 68 DKANDAISKILTEKPSA-QCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG 126
D+ + +IL A + A+ D+ KF ++ILV NAG
Sbjct: 39 DRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLAD 98
Query: 127 ----FSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKD 182
+ ++ TF++N A +T + + TK
Sbjct: 99 GTANTDQPVELYQKTFKLNFQAVIEMTQKT---------------------KEHLIKTKG 137
Query: 183 TISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKI 226
I V Y K + A ++ +
Sbjct: 138 EIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGV 181
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 251
Score = 43.1 bits (101), Expect = 1e-05
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG- 126
++A++A K+ TEK + +A D+ + VKK E ++KF L+ +V AG+
Sbjct: 40 EEASEAAQKL-TEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP 98
Query: 127 -FSHTEDGFETTFQVNHLAHFYL 148
D F +VN +Y+
Sbjct: 99 AEEFPLDEFRQVIEVNLFGTYYV 121
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 252
Score = 43.1 bits (101), Expect = 1e-05
Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Query: 70 ANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGV---FGLG 126
+D K E + +L + + E + +++LV N F
Sbjct: 29 CHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPI 88
Query: 127 FSHTEDGFETTFQVNHLAHFYLT 149
+ + + + + F L
Sbjct: 89 DKYAVEDYRGAVEALQIRPFALV 111
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 297
Score = 42.7 bits (100), Expect = 3e-05
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGF 127
A D + L A+ I ++ ++ + V + F +N LV N G L
Sbjct: 50 KSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP 109
Query: 128 SH--TEDGFETTFQVNHLAHFYLT 149
+ + G+ + N FY+
Sbjct: 110 AEHISSKGWHAVLETNLTGTFYMC 133
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase
{Lactobacillus brevis [TaxId: 1580]}
Length = 251
Score = 42.3 bits (99), Expect = 3e-05
Identities = 19/113 (16%), Positives = 33/113 (29%), Gaps = 3/113 (2%)
Query: 66 CWDKANDAISKILTE-KPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG 124
+ +D K Q + D K + +K F ++ LV NAG+
Sbjct: 35 ITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAV 94
Query: 125 LGFSH--TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHR 175
T + VN F+ T + + + + S E
Sbjct: 95 NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV 147
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase
{Streptomyces hydrogenans [TaxId: 1905]}
Length = 254
Score = 41.1 bits (96), Expect = 6e-05
Identities = 23/163 (14%), Positives = 50/163 (30%), Gaps = 24/163 (14%)
Query: 66 CWDKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGL 125
D ++ + E LD+ + ++ +++F S++ LV NAG+
Sbjct: 34 LADVLDEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG 92
Query: 126 GFSH--TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDT 183
F + + F ++N F + A+ +V +SS +
Sbjct: 93 MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGG--GSIVNISSAAGLM------- 143
Query: 184 ISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKI 226
++Y +K + A +I
Sbjct: 144 ------------GLALTSSYGASKWGVRGLSKLAAVELGTDRI 174
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol
dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId:
35933]}
Length = 268
Score = 40.4 bits (94), Expect = 1e-04
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 66 CWDKANDAISKILTEKPSAQCIA-MELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFG 124
D A+D K+ S I+ + D+ + + V+ + K L+I+ N GV
Sbjct: 35 IADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLS 94
Query: 125 LG----FSHTEDGFETTFQVNHLAHFY 147
+ F+ +N F
Sbjct: 95 TTPYSILEAGNEDFKRVMDINVYGAFL 121
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum
[TaxId: 144185]}
Length = 258
Score = 40.1 bits (93), Expect = 2e-04
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAG---VFG 124
+ + + +L P A+ + D+ V+ + ++F ++ NAG
Sbjct: 39 EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQN 98
Query: 125 LGFSHTEDGFETTFQVNHLAHFY 147
S T F+ +N F
Sbjct: 99 PTESFTAAEFDKVVSINLRGVFL 121
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 255
Score = 39.6 bits (92), Expect = 2e-04
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG- 126
D AN + +I ++ Q A D+ + + A+ K ++ILV NAG G
Sbjct: 46 DAANHVVDEI--QQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKP 103
Query: 127 FSHTEDGFETTFQVNHLAHFY 147
F F +++N + F+
Sbjct: 104 FDMPMADFRRAYELNVFSFFH 124
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 244
Score = 38.5 bits (89), Expect = 4e-04
Identities = 20/132 (15%), Positives = 42/132 (31%), Gaps = 4/132 (3%)
Query: 71 NDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSH- 129
D K + + + + LD+ + K + F L++LV NAG+ +G
Sbjct: 39 LDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIED 98
Query: 130 -TEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSV 188
++ VN F ++ +SS + + +
Sbjct: 99 YALTEWQRILDVNLTGVFLGIRA--VVKPMKEAGRGSIINISSIEGLAGTVACHGYTATK 156
Query: 189 LSVENYSDFWAM 200
+V + A+
Sbjct: 157 FAVRGLTKSTAL 168
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase
{Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 259
Score = 38.2 bits (88), Expect = 7e-04
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG- 126
KA + + L +K AQ +A++ D+ + V ++ F L+ ++ N+G+
Sbjct: 41 SKAAEEVVAEL-KKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD 99
Query: 127 -FSHTEDGFETTFQVNHLAHFYLTLQLENALIKG 159
T++ F+ F +N F++ Q +G
Sbjct: 100 ELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG 133
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 242
Score = 37.7 bits (87), Expect = 8e-04
Identities = 28/161 (17%), Positives = 61/161 (37%), Gaps = 28/161 (17%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG- 126
+ N + + E P + + +DL + +K +++LV NA + +
Sbjct: 36 TRTNSDLVSLAKECPGIEPVC--VDLGDWDATEKALGG----IGPVDLLVNNAALVIMQP 89
Query: 127 -FSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS 185
T++ F+ +F VN + F ++ ++ AR ++ I
Sbjct: 90 FLEVTKEAFDRSFSVNLRSVFQVS-----------QMVARDMI---NRGVPGSIV----- 130
Query: 186 KSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKI 226
+V S+ + F + Y+ TK + + +A +KI
Sbjct: 131 -NVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 170
>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Trypanosoma cruzi [TaxId: 5693]}
Length = 266
Score = 36.8 bits (84), Expect = 0.002
Identities = 21/163 (12%), Positives = 42/163 (25%), Gaps = 7/163 (4%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLC----RLKSVKKFAEEYQKKFRSLNILVLNAGVF 123
+ A + L + + + DL L + + + F ++LV NA +
Sbjct: 36 EGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY 95
Query: 124 GLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDT 183
D + L NA+ A LF + ++ +++
Sbjct: 96 YPTPLLPGDDTNGAADAKPIDAQVAELFGSNAV---APLFLIRAFARRQGEGGAWRSRNL 152
Query: 184 ISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLATLWYKYKI 226
++ Y K A I
Sbjct: 153 SVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHI 195
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermus thermophilus [TaxId: 274]}
Length = 242
Score = 35.8 bits (82), Expect = 0.003
Identities = 22/143 (15%), Positives = 40/143 (27%), Gaps = 24/143 (16%)
Query: 86 CIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGFSH--TEDGFETTFQVNHL 143
+ +D+ SV++ E L+ +V AG+ F + +E +VN
Sbjct: 51 AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLT 110
Query: 144 AHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAY 203
F + A+ + T S+ L Y
Sbjct: 111 GSFLVAKAASEAMR----------------EKNPGSIVLTASRVYLG------NLGQANY 148
Query: 204 NDTKLCNVLFGEKLATLWYKYKI 226
+ V LA ++ I
Sbjct: 149 AASMAGVVGLTRTLALELGRWGI 171
>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase
{Comamonas testosteroni [TaxId: 285]}
Length = 257
Score = 34.1 bits (77), Expect = 0.012
Identities = 32/178 (17%), Positives = 53/178 (29%), Gaps = 14/178 (7%)
Query: 92 DLCRLKSVKK-FAEEYQKKFRSLNILVLNAGVFGLGFSHTEDGFETTFQVNHLAHFYLTL 150
DL + K+ A+ K + ++ LVL AG+ VN+ L
Sbjct: 41 DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGL-----GPQTKVLGNVVSVNYFGATELMD 95
Query: 151 QLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVLSVENYSDFWA-------MTAY 203
AL KG + A V+ + +H ++ AY
Sbjct: 96 AFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAY 155
Query: 204 NDTKLCNVLFGEKLATLWYKYKIALSSRHCCWKITVSKKWWRFGTPVRTFSWISRVRP 261
+K + K A W + + L++ T + P S V P
Sbjct: 156 AGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG-LQDPRYGESIAKFVPP 212
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella
pneumoniae [TaxId: 573]}
Length = 255
Score = 30.5 bits (68), Expect = 0.16
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNAGVFGLGF 127
A S+I + +A+++D+ V E+ +K +++V NAGV
Sbjct: 36 ATAKAVASEI--NQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP 93
Query: 128 SHTEDGFETTF--QVNHLAHFYL 148
+ +N +
Sbjct: 94 IESITPEIVDKVYNINVKGVIWG 116
>d1zkia1 d.38.1.5 (A:4-129) Hypothetical protein PA5202 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 126
Score = 28.4 bits (63), Expect = 0.53
Identities = 7/46 (15%), Positives = 12/46 (26%)
Query: 232 HCCWKITVSKKWWRFGTPVRTFSWISRVRPVTNFQVDLTGTAEKVG 277
+ S V I+ +R V + +V G
Sbjct: 54 DVTMGLACSSSHGFDRQSVTLECKINYIRAVADGEVRCVARVLHAG 99
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial
(DECR) {Human (Homo sapiens), [TaxId: 9606]}
Length = 294
Score = 29.3 bits (65), Expect = 0.56
Identities = 22/135 (16%), Positives = 50/135 (37%), Gaps = 3/135 (2%)
Query: 68 DKANDAISKILTEKPSAQCIAMELDLCRLKSVKKFAEEYQKKFRSLNILVLNA--GVFGL 125
A ++ ++ + + A++ D+ V+ E K NI++ NA
Sbjct: 59 MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP 118
Query: 126 GFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTIS 185
+ + ++T + ++TL++ LIK A+ A + +++ +
Sbjct: 119 TERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK-AQKGAAFLSITTIYAETGSGFVVPSA 177
Query: 186 KSVLSVENYSDFWAM 200
+ VE S A
Sbjct: 178 SAKAGVEAMSKSLAA 192
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein
MoeB {Escherichia coli [TaxId: 562]}
Length = 247
Score = 28.4 bits (62), Expect = 0.99
Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 95 RLKSVKKFAEEYQKKFRSLNILVLNAGVFGLG 126
R ++ F + Q+ + +L++ G GLG
Sbjct: 13 RQIILRGFDFDGQEALKDSRVLIVGLG--GLG 42
>d2vnud3 b.40.4.5 (D:252-399) Exosome complex exonuclease RRP44
{Saccharomyces cerevisiae [TaxId: 4932]}
Length = 148
Score = 26.9 bits (59), Expect = 1.8
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 147 YLTLQLENALIKGAKLFARVVVVSSESHRYSYITKDTISKSVL 189
Y + +K L+ + +S + ++ SK VL
Sbjct: 7 YYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVL 49
>d1dqua_ c.1.12.7 (A:) Isocitrate lyase {Aspergillus nidulans
[TaxId: 162425]}
Length = 519
Score = 27.3 bits (60), Expect = 2.6
Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 31 CTGDMEFYPRYTGLKKKDGNLCFDLVQSSKLFYQNCWDKAND--AISKILTEKPSAQCIA 88
++E + D ++ ++ + +Y+ + AI++ + P A I
Sbjct: 336 GKSNLEARAIAKEIAGTDIYFDWEAPRTREGYYR---YQGGTQCAINRAVAYAPFADLIW 392
Query: 89 MELDLCRLKSVKKFAEEYQKKF 110
ME L K K+FA+ +
Sbjct: 393 MESKLPDYKQAKEFADGVHAVW 414
>d1v05a_ b.1.18.10 (A:) Filamin C {Human (Homo sapiens) [TaxId:
9606]}
Length = 96
Score = 25.7 bits (56), Expect = 2.8
Identities = 10/63 (15%), Positives = 20/63 (31%)
Query: 122 VFGLGFSHTEDGFETTFQVNHLAHFYLTLQLENALIKGAKLFARVVVVSSESHRYSYITK 181
G G S G + +F V+ + + K V + + + +Y K
Sbjct: 11 TRGPGLSQAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVK 70
Query: 182 DTI 184
+
Sbjct: 71 EKG 73
>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding
protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 529
Score = 27.2 bits (60), Expect = 2.9
Identities = 5/25 (20%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Query: 102 FAEEYQKKFRSLNILVLNAGVFGLG 126
+ + Q+ S ++ ++NA G
Sbjct: 15 WGDHGQEALESAHVCLINAT--ATG 37
>d1ovya_ c.55.4.1 (A:) Ribosomal protein L18 (L18p) {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 97
Score = 24.4 bits (53), Expect = 7.2
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 165 RVVVVSSESHRYSYITKDTISKSVLSVENYSDFWAMTAYNDTKLCNVLFGEKLA 218
R+ V S H Y+ I DT S +++S + + + N+ + GE +A
Sbjct: 7 RLSVFRSNKHIYAQIIDDTKSATIVSASTLDKEFGLDSTNNIEAAK-KVGELVA 59
>d2hyec2 a.118.17.1 (C:55-401) Cullin-4A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 347
Score = 25.4 bits (55), Expect = 9.0
Identities = 9/56 (16%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Query: 62 FYQNCWDKANDAISKILTEKPSAQCIAMEL-----DLCRLKSVKKFAEEYQKKFRS 112
+ Q+ W K ++A+ + + + EL +LC K ++ ++
Sbjct: 4 YTQDTWRKLHEAVRAVQSSTSIRYNL-EELYQAVENLCSHKVSPMLYKQLRQACED 58
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.135 0.431
Gapped
Lambda K H
0.267 0.0555 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,119,344
Number of extensions: 49624
Number of successful extensions: 191
Number of sequences better than 10.0: 1
Number of HSP's gapped: 186
Number of HSP's successfully gapped: 38
Length of query: 292
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 207
Effective length of database: 1,240,546
Effective search space: 256793022
Effective search space used: 256793022
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.2 bits)