Your job contains 1 sequence.
>psy4254
MIREKFGEGPRRRYQVRSPPLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQIL
LMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKFLVDSRIYILVL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4254
(114 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-080227-16 - symbol:opn3 "opsin 3" species:7... 130 7.8e-08 1
FB|FBgn0014019 - symbol:Rh5 "Rhodopsin 5" species:7227 "D... 129 9.8e-08 1
UNIPROTKB|Q4R1I4 - symbol:OPN4 "Melanopsin" species:7741 ... 128 3.2e-07 1
UNIPROTKB|F1P4Q2 - symbol:LOC771085 "Uncharacterized prot... 119 6.8e-07 1
ZFIN|ZDB-GENE-091118-50 - symbol:tmtopsb "teleost multipl... 121 9.4e-07 1
UNIPROTKB|E1C4K3 - symbol:COPN5L1 "Uncharacterized protei... 117 1.0e-06 1
FB|FBgn0003250 - symbol:Rh4 "Rhodopsin 4" species:7227 "D... 119 1.2e-06 1
UNIPROTKB|Q9UHM6 - symbol:OPN4 "Melanopsin" species:9606 ... 120 1.3e-06 1
UNIPROTKB|C9JWU6 - symbol:OPN4 "Melanopsin" species:9606 ... 120 1.4e-06 1
UNIPROTKB|F1NU85 - symbol:COPN5L1 "Uncharacterized protei... 114 2.2e-06 1
RGD|621701 - symbol:Opn4 "opsin 4" species:10116 "Rattus ... 117 2.8e-06 1
FB|FBgn0003249 - symbol:Rh3 "Rhodopsin 3" species:7227 "D... 114 4.2e-06 1
ZFIN|ZDB-GENE-110411-43 - symbol:si:ch211-259i2.2 "si:ch2... 112 6.9e-06 1
UNIPROTKB|E1BEK2 - symbol:OPN4 "Uncharacterized protein" ... 112 9.8e-06 1
UNIPROTKB|F1SEN9 - symbol:OPN4 "Uncharacterized protein" ... 110 1.0e-05 1
UNIPROTKB|Q5XXP2 - symbol:OPN4 "Melanopsin" species:10044... 111 1.2e-05 1
MGI|MGI:1353425 - symbol:Opn4 "opsin 4 (melanopsin)" spec... 111 1.4e-05 1
UNIPROTKB|E1C1F4 - symbol:OPN3 "Uncharacterized protein" ... 108 2.0e-05 1
ZFIN|ZDB-GENE-030716-3 - symbol:tmtopsa "teleost multiple... 107 2.4e-05 1
ZFIN|ZDB-GENE-110622-1 - symbol:opn4xa "opsin 4xa" specie... 108 3.1e-05 1
UNIPROTKB|Q5YKK9 - symbol:OPN4 "Melanopsin" species:9685 ... 107 3.5e-05 1
ZFIN|ZDB-GENE-030314-2 - symbol:opn4.1 "opsin 4.1" specie... 105 5.9e-05 1
UNIPROTKB|F1NA47 - symbol:OPN4-1 "Uncharacterized protein... 105 6.6e-05 1
UNIPROTKB|Q8HY69 - symbol:RHO "Rhodopsin" species:9301 "S... 102 7.2e-05 1
ZFIN|ZDB-GENE-070705-526 - symbol:opn4xb "opsin 4xb" spec... 103 8.6e-05 1
FB|FBgn0036260 - symbol:Rh7 "Rhodopsin 7" species:7227 "D... 103 9.2e-05 1
UNIPROTKB|Q68J47 - symbol:RHO "Rhodopsin" species:9785 "L... 101 9.3e-05 1
ZFIN|ZDB-GENE-091204-311 - symbol:si:ch73-52f15.6 "si:ch7... 101 9.6e-05 1
UNIPROTKB|F1NEY8 - symbol:OPN4 "Uncharacterized protein" ... 103 0.00010 1
ZFIN|ZDB-GENE-080415-3 - symbol:opn4b "opsin 4b" species:... 103 0.00011 1
UNIPROTKB|F1NB72 - symbol:COPN5L2 "Uncharacterized protei... 98 0.00016 1
UNIPROTKB|P28683 - symbol:PRA1 "Green-sensitive opsin" sp... 98 0.00020 1
UNIPROTKB|F1PZ49 - symbol:OPN3 "Uncharacterized protein" ... 97 0.00029 1
UNIPROTKB|P49912 - symbol:RHO "Rhodopsin" species:9986 "O... 96 0.00032 1
UNIPROTKB|O18766 - symbol:RHO "Rhodopsin" species:9823 "S... 95 0.00042 1
UNIPROTKB|O62794 - symbol:RHO "Rhodopsin" species:9720 "P... 95 0.00042 1
UNIPROTKB|O62796 - symbol:RHO "Rhodopsin" species:9778 "T... 95 0.00042 1
UNIPROTKB|Q6W3E1 - symbol:RHO "Rhodopsin" species:70610 "... 95 0.00042 1
UNIPROTKB|Q95KU1 - symbol:RHO "Rhodopsin" species:9685 "F... 95 0.00042 1
ZFIN|ZDB-GENE-081105-91 - symbol:si:ch211-37p17.5 "si:ch2... 95 0.00046 1
UNIPROTKB|F1NEL9 - symbol:RRH "Uncharacterized protein" s... 94 0.00050 1
UNIPROTKB|Q9H1Y3 - symbol:OPN3 "Opsin-3" species:9606 "Ho... 95 0.00052 1
UNIPROTKB|E2R3W5 - symbol:OPN4 "Uncharacterized protein" ... 96 0.00052 1
UNIPROTKB|P32308 - symbol:RHO "Rhodopsin" species:9615 "C... 94 0.00053 1
UNIPROTKB|P08100 - symbol:RHO "Rhodopsin" species:9606 "H... 94 0.00053 1
UNIPROTKB|P02700 - symbol:RHO "Rhodopsin" species:9940 "O... 94 0.00053 1
UNIPROTKB|Q28886 - symbol:RHO "Rhodopsin" species:9541 "M... 94 0.00053 1
UNIPROTKB|Q769E8 - symbol:RHO "Rhodopsin" species:9463 "O... 94 0.00053 1
ZFIN|ZDB-GENE-070111-2 - symbol:opn4a "opsin 4a (melanops... 97 0.00054 1
UNIPROTKB|P02699 - symbol:RHO "Rhodopsin" species:9913 "B... 93 0.00068 1
UNIPROTKB|O62791 - symbol:RHO "Rhodopsin" species:9728 "D... 92 0.00088 1
UNIPROTKB|O62792 - symbol:RHO "Rhodopsin" species:9731 "G... 92 0.00088 1
UNIPROTKB|O62798 - symbol:RHO "Rhodopsin" species:9739 "T... 92 0.00088 1
UNIPROTKB|P28681 - symbol:RHO "Rhodopsin" species:10029 "... 92 0.00088 1
MGI|MGI:97914 - symbol:Rho "rhodopsin" species:10090 "Mus... 92 0.00088 1
UNIPROTKB|P22328 - symbol:RHO "Rhodopsin" species:9031 "G... 92 0.00089 1
>ZFIN|ZDB-GENE-080227-16 [details] [associations]
symbol:opn3 "opsin 3" species:7955 "Danio rerio"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR000276
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PROSITE:PS00237 PROSITE:PS50262
ZFIN:ZDB-GENE-080227-16 GO:GO:0016021 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 PROSITE:PS00238
GeneTree:ENSGT00700000104057 CTD:23596 eggNOG:NOG250907
HOGENOM:HOG000029042 HOVERGEN:HBG100337 KO:K04256 OMA:TFLICWM
OrthoDB:EOG4B5P5K EMBL:BX005050 EMBL:EF043381 IPI:IPI00487607
RefSeq:NP_001104634.1 UniGene:Dr.117644 Ensembl:ENSDART00000074698
GeneID:561815 KEGG:dre:561815 NextBio:20884103 Uniprot:A9NJI7
Length = 387
Score = 130 (50.8 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 55 RTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
+ A + LM++ CFL+ WTPYAV++ + FG S+++P V+ P++FAK
Sbjct: 236 KVAVMFLMMISCFLVCWTPYAVVSMLEAFGKKSVVSPTVAIIPSLFAK 283
>FB|FBgn0014019 [details] [associations]
symbol:Rh5 "Rhodopsin 5" species:7227 "Drosophila
melanogaster" [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=IGI;ISS;NAS] [GO:0016021 "integral to membrane"
evidence=ISS;NAS] [GO:0007602 "phototransduction"
evidence=IGI;ISS;NAS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=NAS] [GO:0016028 "rhabdomere"
evidence=IDA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA;ISS] [GO:0016038 "absorption of visible
light" evidence=IMP] [GO:0007601 "visual perception" evidence=IEA]
[GO:0009416 "response to light stimulus" evidence=IDA] [GO:0007605
"sensory perception of sound" evidence=IMP] InterPro:IPR000276
InterPro:IPR000856 InterPro:IPR001760 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00577 PROSITE:PS00237
PROSITE:PS50262 GO:GO:0016021 EMBL:AE014134 GO:GO:0007601
GO:GO:0007605 GO:GO:0018298 GO:GO:0016028 GO:GO:0008020
PROSITE:PS00238 GeneTree:ENSGT00700000104057 KO:K04255 EMBL:U67905
EMBL:U80667 EMBL:AY069237 RefSeq:NP_477096.1 UniGene:Dm.409
ProteinModelPortal:P91657 SMR:P91657 STRING:P91657 PRIDE:P91657
EnsemblMetazoa:FBtr0080291 GeneID:34615 KEGG:dme:Dmel_CG5279
CTD:34615 FlyBase:FBgn0014019 eggNOG:NOG317738 InParanoid:P91657
OMA:NAFIAFD OrthoDB:EOG49CNQ5 PhylomeDB:P91657 GenomeRNAi:34615
NextBio:789324 Bgee:P91657 GermOnline:CG5279 GO:GO:0016038
GO:GO:0009588 Uniprot:P91657
Length = 382
Score = 129 (50.5 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 47 ATPLNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKFL-- 104
A ++ +R A+ L++ + F+LAWTPY+V+ IG FG+ LITP+VS P + K +
Sbjct: 267 ADNMSVELRIAKAALIIYMLFILAWTPYSVVALIGCFGEQQLITPFVSMLPCLACKSVSC 326
Query: 105 VDSRIY 110
+D +Y
Sbjct: 327 LDPWVY 332
>UNIPROTKB|Q4R1I4 [details] [associations]
symbol:OPN4 "Melanopsin" species:7741 "Branchiostoma
belcheri" [GO:0004744 "retinal isomerase activity" evidence=IDA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IDA] [GO:0007602 "phototransduction" evidence=TAS]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IDA] [GO:0009584 "detection of visible light"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IDA]
InterPro:IPR000276 InterPro:IPR001760 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PROSITE:PS00237
PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601 GO:GO:0018298
GO:GO:0007602 GO:GO:0008020 PROSITE:PS00238 EMBL:AB205400
HSSP:P02699 ProteinModelPortal:Q4R1I4 GO:GO:0004744 Uniprot:Q4R1I4
Length = 706
Score = 128 (50.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 54 VRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
++TA+I +++ F+ AWTPYAV++ +G G L+TP++ + PA+FAK
Sbjct: 310 IKTAKIAFIVISLFMSAWTPYAVVSALGTLGYQDLVTPYLQSIPAMFAK 358
>UNIPROTKB|F1P4Q2 [details] [associations]
symbol:LOC771085 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007601 "visual perception" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR000276
InterPro:IPR001760 InterPro:IPR002962 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR01244
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0004930
GO:GO:0007601 GO:GO:0009881 GO:GO:0018298 PROSITE:PS00238
GeneTree:ENSGT00700000104057 EMBL:AADN02017868 EMBL:AC147973
EMBL:AADN02017869 IPI:IPI00812357 ProteinModelPortal:F1P4Q2
Ensembl:ENSGALT00000027125 OMA:FIMTFGF Uniprot:F1P4Q2
Length = 287
Score = 119 (46.9 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 37 AYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSAT 96
A K IH+ T +++ VIC+L+ W PY VI + FG ++TP S
Sbjct: 198 AVKQVGKIHKNTARKREYHVLFMVITTVICYLVCWIPYGVIALLATFGKPGVVTPVASII 257
Query: 97 PAIFAKF--LVDSRIYILV 113
P+I AK + + IYIL+
Sbjct: 258 PSILAKSSTVCNPIIYILM 276
>ZFIN|ZDB-GENE-091118-50 [details] [associations]
symbol:tmtopsb "teleost multiple tissue opsin b"
species:7955 "Danio rerio" [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000276 InterPro:IPR001760 InterPro:IPR002962
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR01244 PROSITE:PS00237 PROSITE:PS50262
ZFIN:ZDB-GENE-091118-50 GO:GO:0016021 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 PROSITE:PS00238
GeneTree:ENSGT00700000104057 EMBL:CR352209 EMBL:CU302291
IPI:IPI00609118 Ensembl:ENSDART00000038824 Uniprot:E7F1P3
Length = 448
Score = 121 (47.7 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 30 VVTNYTLAYKLAMPIHRATPLNSAVRTAQILLM---LVICFLLAWTPYAVITFIGQFGDA 86
+V +Y + + R + S R ++L M +V+C+LL W PY ++ + FG
Sbjct: 269 IVYSYGRLLQAITQVSRINTVVSRKREQRVLFMVVTMVVCYLLCWLPYGIMALLATFGHP 328
Query: 87 SLITPWVSATPAIFAKF--LVDSRIYILV 113
L+TP S P++ AK +++ IYI +
Sbjct: 329 GLVTPAASIVPSLLAKSSTVINPIIYIFM 357
>UNIPROTKB|E1C4K3 [details] [associations]
symbol:COPN5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000276
InterPro:IPR002962 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01244 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601
GO:GO:0007186 GeneTree:ENSGT00690000101836 EMBL:AADN02021419
IPI:IPI00822575 ProteinModelPortal:E1C4K3
Ensembl:ENSGALT00000036789 Uniprot:E1C4K3
Length = 274
Score = 117 (46.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 29/87 (33%), Positives = 42/87 (48%)
Query: 24 ICDCGGVVTNYTLAYKLAMPIHRAT---PLNSAVRTAQIL---LMLVIC--FLLAWTPYA 75
I CG +VT+Y+L +A P + + ++L L + +C F AW+PYA
Sbjct: 169 ILPCGVIVTSYSLILVTVKESSKAAEELPSSCTTQHCEVLVYKLSIAVCIGFFAAWSPYA 228
Query: 76 VITFIGQFGDASLITPWVSATPAIFAK 102
+I FG I P A PA+FAK
Sbjct: 229 IIAMWAAFGSIDKIPPLAFAIPAVFAK 255
>FB|FBgn0003250 [details] [associations]
symbol:Rh4 "Rhodopsin 4" species:7227 "Drosophila
melanogaster" [GO:0007604 "phototransduction, UV"
evidence=NAS;IDA;TAS] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=ISS;NAS;IDA;TAS] [GO:0009589 "detection of UV"
evidence=TAS] [GO:0007602 "phototransduction" evidence=NAS]
[GO:0004930 "G-protein coupled receptor activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=IEA;ISS;NAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA;ISS] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR000276 InterPro:IPR000856 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00577
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 EMBL:AE014296
GO:GO:0007601 GO:GO:0018298 GO:GO:0008020 PROSITE:PS00238
GeneTree:ENSGT00700000104057 eggNOG:NOG319103 KO:K04255
OrthoDB:EOG480GC6 GO:GO:0007604 EMBL:M17730 EMBL:M17719 PIR:S28789
RefSeq:NP_476701.1 UniGene:Dm.4810 ProteinModelPortal:P08255
SMR:P08255 STRING:P08255 EnsemblMetazoa:FBtr0075338 GeneID:39887
KEGG:dme:Dmel_CG9668 CTD:39887 FlyBase:FBgn0003250
InParanoid:P08255 OMA:FLFCAST PhylomeDB:P08255 ChiTaRS:RHD
GenomeRNAi:39887 NextBio:815906 Bgee:P08255 GermOnline:CG9668
Uniprot:P08255
Length = 378
Score = 119 (46.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 54 VRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKFL--VDSRIYI 111
+R A+ + + F ++WTPY V++ IG FGD SL+TP + PA K + +D +Y
Sbjct: 276 IRIAKAAITICFLFFVSWTPYGVMSLIGAFGDKSLLTPGATMIPACTCKLVACIDPFVYA 335
Query: 112 L 112
+
Sbjct: 336 I 336
>UNIPROTKB|Q9UHM6 [details] [associations]
symbol:OPN4 "Melanopsin" species:9606 "Homo sapiens"
[GO:0007601 "visual perception" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=IDA] [GO:0007602 "phototransduction"
evidence=IDA] [GO:0005502 "11-cis retinal binding" evidence=IDA]
[GO:0042752 "regulation of circadian rhythm" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0009584 "detection
of visible light" evidence=IDA] InterPro:IPR000276
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0007601 GO:GO:0042752
GO:GO:0048511 GO:GO:0018298 GO:GO:0007602 GO:GO:0008020
PROSITE:PS00238 HOGENOM:HOG000264261 HOVERGEN:HBG007871 KO:K04255
CTD:94233 GO:GO:0005502 EMBL:AF147788 EMBL:DQ314804 EMBL:BC113558
EMBL:BC143688 EMBL:AB065730 IPI:IPI00005930 IPI:IPI00646790
RefSeq:NP_001025186.1 RefSeq:NP_150598.1 UniGene:Hs.283922
ProteinModelPortal:Q9UHM6 SMR:Q9UHM6 STRING:Q9UHM6 DMDM:13632136
PRIDE:Q9UHM6 Ensembl:ENST00000241891 Ensembl:ENST00000372071
GeneID:94233 KEGG:hsa:94233 UCSC:uc001kdp.3 UCSC:uc001kdq.3
GeneCards:GC10P088417 HGNC:HGNC:14449 HPA:HPA039147 MIM:606665
neXtProt:NX_Q9UHM6 PharmGKB:PA31940 eggNOG:NOG255465
OrthoDB:EOG418BNM PhylomeDB:Q9UHM6 GenomeRNAi:94233 NextBio:78466
ArrayExpress:Q9UHM6 Bgee:Q9UHM6 CleanEx:HS_OPN4
Genevestigator:Q9UHM6 GermOnline:ENSG00000122375 Uniprot:Q9UHM6
Length = 478
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 19/53 (35%), Positives = 37/53 (69%)
Query: 50 LNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
L S + A+I+L++++ F+L+W PY+ + + G A ++TP++S+ PA+ AK
Sbjct: 288 LQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYMSSVPAVIAK 340
>UNIPROTKB|C9JWU6 [details] [associations]
symbol:OPN4 "Melanopsin" species:9606 "Homo sapiens"
[GO:0007601 "visual perception" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0004930
GO:GO:0007601 GO:GO:0009881 GO:GO:0018298 EMBL:AC067750
PROSITE:PS00238 HOGENOM:HOG000264261 IPI:IPI00646790
HGNC:HGNC:14449 OMA:VLTPYMN ProteinModelPortal:C9JWU6 SMR:C9JWU6
STRING:C9JWU6 Ensembl:ENST00000443292 UCSC:uc010qmk.1
ArrayExpress:C9JWU6 Bgee:C9JWU6 Uniprot:C9JWU6
Length = 495
Score = 120 (47.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 19/53 (35%), Positives = 37/53 (69%)
Query: 50 LNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
L S + A+I+L++++ F+L+W PY+ + + G A ++TP++S+ PA+ AK
Sbjct: 299 LQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYMSSVPAVIAK 351
>UNIPROTKB|F1NU85 [details] [associations]
symbol:COPN5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000276
InterPro:IPR002962 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01244 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601
GO:GO:0007186 GeneTree:ENSGT00690000101836 EMBL:AADN02021419
IPI:IPI00583858 Ensembl:ENSGALT00000024454 OMA:VCIGFFA
Uniprot:F1NU85
Length = 276
Score = 114 (45.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 32/91 (35%), Positives = 45/91 (49%)
Query: 24 ICDCGGVVTNYTLAY------KLAMPIHRATPL---NSAVRTAQIL-LMLVIC--FLLAW 71
I CG +VT+Y+L + A+ H + P N TA++ L + +C F AW
Sbjct: 169 ILPCGVIVTSYSLILVTVKESRKAVEQHVSGPTRINNVQTITAKVYKLSIAVCIGFFAAW 228
Query: 72 TPYAVITFIGQFGDASLITPWVSATPAIFAK 102
+PYA+I FG I P A PA+FAK
Sbjct: 229 SPYAIIAMWAAFGSIDKIPPLAFAIPAVFAK 259
>RGD|621701 [details] [associations]
symbol:Opn4 "opsin 4" species:10116 "Rattus norvegicus"
[GO:0005502 "11-cis retinal binding" evidence=ISO;ISS] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007602 "phototransduction"
evidence=ISO;IDA] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=ISO;IDA] [GO:0009584 "detection of visible
light" evidence=ISO;IDA] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0016056 "rhodopsin mediated signaling pathway"
evidence=ISO] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR000276 InterPro:IPR001760 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PROSITE:PS00237
PROSITE:PS50262 RGD:621701 GO:GO:0016021 GO:GO:0007601
GO:GO:0042752 GO:GO:0018298 GO:GO:0007602 GO:GO:0008020
PROSITE:PS00238 GeneTree:ENSGT00690000101836 HOGENOM:HOG000264261
HOVERGEN:HBG007871 KO:K04255 CTD:94233 GO:GO:0005502
eggNOG:NOG255465 OrthoDB:EOG418BNM OMA:VLTPYMN EMBL:AY072689
IPI:IPI00196125 RefSeq:NP_620215.1 UniGene:Rn.54303
ProteinModelPortal:Q8R456 STRING:Q8R456 PRIDE:Q8R456
Ensembl:ENSRNOT00000015642 GeneID:192223 KEGG:rno:192223
UCSC:RGD:621701 InParanoid:Q8R456 NextBio:622820
Genevestigator:Q8R456 GermOnline:ENSRNOG00000011600 Uniprot:Q8R456
Length = 474
Score = 117 (46.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 18/53 (33%), Positives = 37/53 (69%)
Query: 50 LNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
L S + A++ L++++ F+L+W PY+ + +G G + ++TP++S+ PA+ AK
Sbjct: 285 LQSEWKMAKVALIVILLFVLSWAPYSTVALVGFAGYSHILTPYMSSVPAVIAK 337
>FB|FBgn0003249 [details] [associations]
symbol:Rh3 "Rhodopsin 3" species:7227 "Drosophila
melanogaster" [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=ISS;NAS;IDA;TAS] [GO:0007604 "phototransduction,
UV" evidence=NAS;IDA;TAS] [GO:0009589 "detection of UV"
evidence=TAS] [GO:0007602 "phototransduction" evidence=NAS]
[GO:0004930 "G-protein coupled receptor activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=IEA;ISS;NAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA;ISS] [GO:0016039 "absorption of UV light"
evidence=IMP] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR000276 InterPro:IPR000856 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00577
PROSITE:PS00237 PROSITE:PS50262 EMBL:AE014297 GO:GO:0016021
GO:GO:0007601 GO:GO:0018298 GO:GO:0008020 PROSITE:PS00238
GeneTree:ENSGT00700000104057 eggNOG:NOG319103 KO:K04255 EMBL:Y00043
EMBL:M17718 EMBL:AF184224 PIR:A26768 RefSeq:NP_524411.1
UniGene:Dm.2396 ProteinModelPortal:P04950 SMR:P04950 STRING:P04950
PRIDE:P04950 EnsemblMetazoa:FBtr0083876 GeneID:42398
KEGG:dme:Dmel_CG10888 CTD:42398 FlyBase:FBgn0003249
InParanoid:P04950 OMA:EPPESMN OrthoDB:EOG480GC6 PhylomeDB:P04950
GenomeRNAi:42398 NextBio:828602 Bgee:P04950 GermOnline:CG10888
GO:GO:0016039 GO:GO:0007604 Uniprot:P04950
Length = 383
Score = 114 (45.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 54 VRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKFL--VDSRIYI 111
+R A+ + + F +WTPY V++ IG FGD +L+TP + PA K + +D +Y
Sbjct: 280 IRIAKAAITICFLFFCSWTPYGVMSLIGAFGDKTLLTPGATMIPACACKMVACIDPFVYA 339
Query: 112 L 112
+
Sbjct: 340 I 340
>ZFIN|ZDB-GENE-110411-43 [details] [associations]
symbol:si:ch211-259i2.2 "si:ch211-259i2.2"
species:7955 "Danio rerio" [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
InterPro:IPR000276 InterPro:IPR001760 InterPro:IPR002962
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR01244 PROSITE:PS00237 PROSITE:PS50262
ZFIN:ZDB-GENE-110411-43 GO:GO:0016021 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 PROSITE:PS00238
GeneTree:ENSGT00700000104057 EMBL:CR450794 IPI:IPI00803303
ProteinModelPortal:E7F8D2 Ensembl:ENSDART00000032368 Uniprot:E7F8D2
Length = 381
Score = 112 (44.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 59 ILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
+++ V+C+LL W PY V+ + FG +I+P S P++ AK +++ IYIL+
Sbjct: 251 MVITTVVCYLLCWMPYGVVAMMATFGRPGIISPVASVVPSLLAKSSTVINPLIYILM 307
>UNIPROTKB|E1BEK2 [details] [associations]
symbol:OPN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA] [GO:0007602 "phototransduction" evidence=IEA]
[GO:0005502 "11-cis retinal binding" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601
GO:GO:0042752 GO:GO:0018298 GO:GO:0007602 GO:GO:0008020
PROSITE:PS00238 GeneTree:ENSGT00690000101836 KO:K04255 CTD:94233
GO:GO:0005502 OMA:VLTPYMN EMBL:DAAA02062163 IPI:IPI00700933
RefSeq:NP_001179328.1 UniGene:Bt.106428 ProteinModelPortal:E1BEK2
Ensembl:ENSBTAT00000040059 GeneID:515152 KEGG:bta:515152
NextBio:20871688 Uniprot:E1BEK2
Length = 478
Score = 112 (44.5 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 18/53 (33%), Positives = 37/53 (69%)
Query: 50 LNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
L + + A+I L++++ F+L+W PY+ + +G G A ++TP++++ PA+ AK
Sbjct: 288 LQNEWKMAKIELLVILLFVLSWAPYSTVALMGFAGYAHILTPYMNSVPAVIAK 340
>UNIPROTKB|F1SEN9 [details] [associations]
symbol:OPN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA] [GO:0007602 "phototransduction" evidence=IEA]
[GO:0005502 "11-cis retinal binding" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601
GO:GO:0042752 GO:GO:0018298 GO:GO:0007602 GO:GO:0008020
PROSITE:PS00238 GeneTree:ENSGT00690000101836 GO:GO:0005502
EMBL:CU468409 Ensembl:ENSSSCT00000011340 OMA:FESAPIS Uniprot:F1SEN9
Length = 358
Score = 110 (43.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 50 LNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
L + + A+I L++++ F+L+W PY+ + +G G ++TP+V++ PA+ AK
Sbjct: 288 LQNEWKMAKIELLVILLFVLSWAPYSTVALMGFAGYGHVLTPYVNSVPAVIAK 340
>UNIPROTKB|Q5XXP2 [details] [associations]
symbol:OPN4 "Melanopsin" species:10044 "Phodopus sungorus"
[GO:0005502 "11-cis retinal binding" evidence=ISS] [GO:0007602
"phototransduction" evidence=ISS] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009584 "detection of
visible light" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601
GO:GO:0042752 GO:GO:0048511 GO:GO:0018298 GO:GO:0007602
GO:GO:0008020 PROSITE:PS00238 HOVERGEN:HBG007871 GO:GO:0005502
EMBL:AY726733 ProteinModelPortal:Q5XXP2 Uniprot:Q5XXP2
Length = 469
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 50 LNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
L S + A++ L++++ F+L+W PY+ + + G + ++TP++S+ PA+ AK
Sbjct: 284 LQSEWKMAKVALIVILLFVLSWAPYSTVALVAFAGYSHILTPYMSSVPAVIAK 336
>MGI|MGI:1353425 [details] [associations]
symbol:Opn4 "opsin 4 (melanopsin)" species:10090 "Mus
musculus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005502 "11-cis retinal binding" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IMP] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007602 "phototransduction" evidence=ISO;IMP]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=ISO;IDA;IMP] [GO:0009584 "detection of visible light"
evidence=ISO;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=TAS] [GO:0016056 "rhodopsin
mediated signaling pathway" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042752 "regulation
of circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR000276 InterPro:IPR001760 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PROSITE:PS00237
PROSITE:PS50262 MGI:MGI:1353425 GO:GO:0016021 GO:GO:0007601
GO:GO:0042752 GO:GO:0048511 GO:GO:0018298 GO:GO:0007602
GO:GO:0008020 PROSITE:PS00238 GeneTree:ENSGT00690000101836
HOGENOM:HOG000264261 HOVERGEN:HBG007871 KO:K04255 CTD:94233
GO:GO:0005502 eggNOG:NOG255465 OrthoDB:EOG418BNM EMBL:AF147789
EMBL:EU303117 EMBL:EU303118 EMBL:AC114543 EMBL:BC139827
IPI:IPI00135704 IPI:IPI00896577 RefSeq:NP_038915.1
UniGene:Mm.272060 ProteinModelPortal:Q9QXZ9 SMR:Q9QXZ9
STRING:Q9QXZ9 PRIDE:Q9QXZ9 Ensembl:ENSMUST00000022331
Ensembl:ENSMUST00000168444 GeneID:30044 KEGG:mmu:30044
InParanoid:Q9QXZ9 OMA:VLTPYMN NextBio:307136 Bgee:Q9QXZ9
CleanEx:MM_OPN4 Genevestigator:Q9QXZ9 GermOnline:ENSMUSG00000021799
Uniprot:Q9QXZ9
Length = 521
Score = 111 (44.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 50 LNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
L S + A++ L++++ F+L+W PY+ + + G + ++TP++S+ PA+ AK
Sbjct: 285 LQSEWKMAKVALIVILLFVLSWAPYSTVALVAFAGYSHILTPYMSSVPAVIAK 337
>UNIPROTKB|E1C1F4 [details] [associations]
symbol:OPN3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007601 "visual perception" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0004930
GO:GO:0007601 GO:GO:0009881 GO:GO:0018298 PROSITE:PS00238
GeneTree:ENSGT00700000104057 CTD:23596 KO:K04256 OMA:TFLICWM
EMBL:AADN02011750 IPI:IPI00598916 RefSeq:XP_426139.2
ProteinModelPortal:E1C1F4 Ensembl:ENSGALT00000017501 GeneID:428582
KEGG:gga:428582 NextBio:20829533 Uniprot:E1C1F4
Length = 395
Score = 108 (43.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 17/48 (35%), Positives = 33/48 (68%)
Query: 55 RTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
+ A++ +++ FL+ W PYAV++ + +G ++L+TP V+ P+ FAK
Sbjct: 245 KVAKMCFLMISTFLICWMPYAVVSLLVTYGYSNLVTPTVAIIPSFFAK 292
>ZFIN|ZDB-GENE-030716-3 [details] [associations]
symbol:tmtopsa "teleost multiple tissue opsin a"
species:7955 "Danio rerio" [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0009881 "photoreceptor activity" evidence=IEA;ISS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000276 InterPro:IPR001760 InterPro:IPR002962
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01244
PROSITE:PS00237 PROSITE:PS50262 ZFIN:ZDB-GENE-030716-3
GO:GO:0016021 GO:GO:0004930 GO:GO:0007601 GO:GO:0009881
GO:GO:0018298 PROSITE:PS00238 GeneTree:ENSGT00700000104057
HOGENOM:HOG000029042 KO:K04256 eggNOG:NOG311294 EMBL:CABZ01063645
EMBL:CABZ01063646 EMBL:CABZ01063647 EMBL:CABZ01063648
EMBL:CABZ01063649 EMBL:CABZ01063650 EMBL:CABZ01063651
EMBL:CABZ01063652 EMBL:BC163681 IPI:IPI00511495
RefSeq:NP_001112371.1 UniGene:Dr.26699 Ensembl:ENSDART00000081729
GeneID:359832 KEGG:dre:359832 CTD:359832 HOVERGEN:HBG101353
OMA:NDISYIM OrthoDB:EOG498V1M NextBio:20812758 Uniprot:B3DK10
Length = 387
Score = 107 (42.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 39 KLAMPIHRATPLNSAV---RTAQILLM---LVICFLLAWTPYAVITFIGQFGDASLITPW 92
KL I + + +N++V R ++LLM +V+ +LL W PY ++ + FG L+T
Sbjct: 226 KLLHAIKQVSSVNTSVSRKREHRVLLMVITMVVFYLLCWLPYGIMALLATFGAPGLVTAE 285
Query: 93 VSATPAIFAKF--LVDSRIYILV 113
S P+I AK +++ IYI +
Sbjct: 286 ASIVPSILAKSSTVINPVIYIFM 308
>ZFIN|ZDB-GENE-110622-1 [details] [associations]
symbol:opn4xa "opsin 4xa" species:7955 "Danio rerio"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA;IDA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR000276
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PROSITE:PS00237 PROSITE:PS50262
ZFIN:ZDB-GENE-110622-1 GO:GO:0016021 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 PROSITE:PS00238
GeneTree:ENSGT00690000101836 EMBL:CU914531 IPI:IPI00934356
ProteinModelPortal:F1RDY6 Ensembl:ENSDART00000108727 Bgee:F1RDY6
Uniprot:F1RDY6
Length = 539
Score = 108 (43.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 39 KLAMPIHRATPLNS-AVRT----AQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWV 93
KL + + T + +++T A+I +++I F+L+W+PYA +T I G + +++P+
Sbjct: 223 KLGSHVRKTTLIQQQSIKTEWKLAKIAFVVIIVFVLSWSPYACVTLIAWAGYSHVLSPYS 282
Query: 94 SATPAIFAK 102
A PA+ AK
Sbjct: 283 KAVPAVIAK 291
>UNIPROTKB|Q5YKK9 [details] [associations]
symbol:OPN4 "Melanopsin" species:9685 "Felis catus"
[GO:0005502 "11-cis retinal binding" evidence=ISS] [GO:0007602
"phototransduction" evidence=ISS] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009584 "detection of
visible light" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601
GO:GO:0042752 GO:GO:0048511 GO:GO:0018298 GO:GO:0007602
GO:GO:0008020 PROSITE:PS00238 GeneTree:ENSGT00690000101836
HOVERGEN:HBG007871 EMBL:AY382594 RefSeq:NP_001009325.1
ProteinModelPortal:Q5YKK9 GeneID:493921 KEGG:fca:493921 CTD:94233
GO:GO:0005502 Uniprot:Q5YKK9
Length = 487
Score = 107 (42.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 16/48 (33%), Positives = 35/48 (72%)
Query: 55 RTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
+ A+I L++++ F+L+W PY+++ + G A ++TP++++ PA+ AK
Sbjct: 288 KMAKIELLVILLFVLSWAPYSIVALMAFAGYAHVLTPYMNSVPAVIAK 335
>ZFIN|ZDB-GENE-030314-2 [details] [associations]
symbol:opn4.1 "opsin 4.1" species:7955 "Danio rerio"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA;IDA] [GO:0008377
"light-induced release of internally sequestered calcium ion"
evidence=IDA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0007602
"phototransduction" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 ZFIN:ZDB-GENE-030314-2
GO:GO:0016021 GO:GO:0004930 GO:GO:0007601 GO:GO:0009881
GO:GO:0018298 PROSITE:PS00238 EMBL:AY078161 EMBL:BC116614
IPI:IPI00508591 RefSeq:NP_840074.1 UniGene:Dr.24957
ProteinModelPortal:Q1JPS6 STRING:Q1JPS6 Ensembl:ENSDART00000018501
GeneID:352918 KEGG:dre:352918 CTD:352918 eggNOG:NOG319103
GeneTree:ENSGT00690000101836 HOGENOM:HOG000264261
HOVERGEN:HBG007871 InParanoid:Q1JPS6 KO:K04255 OMA:HAHYIIG
OrthoDB:EOG40VVRJ NextBio:20812661 Bgee:Q1JPS6 GO:GO:0008377
Uniprot:Q1JPS6
Length = 500
Score = 105 (42.0 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 14/48 (29%), Positives = 34/48 (70%)
Query: 55 RTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
+ A++ L++++ F+++W+PY+V+ G + +TP++++ PA+ AK
Sbjct: 283 KMAKVALVVIVLFIISWSPYSVVALTATAGYSHFLTPYMNSVPAVIAK 330
>UNIPROTKB|F1NA47 [details] [associations]
symbol:OPN4-1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007601 "visual perception" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR000276
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0004930 GO:GO:0007601 GO:GO:0009881 GO:GO:0018298
PROSITE:PS00238 GeneTree:ENSGT00690000101836 EMBL:AADN02016047
EMBL:AADN02016048 EMBL:AADN02016049 EMBL:AADN02016050
IPI:IPI00599581 ProteinModelPortal:F1NA47
Ensembl:ENSGALT00000016948 OMA:LMISCTW Uniprot:F1NA47
Length = 542
Score = 105 (42.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 55 RTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
+ A+I +++I ++L+W+PYA +T I G + +TP+ + PA+ AK
Sbjct: 241 KLAKIAFVVIIVYVLSWSPYACVTLIAWAGRGNTLTPYSKSVPAVIAK 288
>UNIPROTKB|Q8HY69 [details] [associations]
symbol:RHO "Rhodopsin" species:9301 "Sminthopsis
crassicaudata" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0042622 "photoreceptor outer segment membrane"
evidence=ISS] [GO:0060342 "photoreceptor inner segment membrane"
evidence=ISS] InterPro:IPR000276 InterPro:IPR000732
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262
GO:GO:0016021 GO:GO:0005886 GO:GO:0046872 GO:GO:0004930
GO:GO:0007601 GO:GO:0007186 GO:GO:0009881 GO:GO:0018298
GO:GO:0007602 GO:GO:0042622 HOVERGEN:HBG107442 PROSITE:PS00238
GO:GO:0060342 InterPro:IPR019477 Pfam:PF10413 EMBL:AY159786
ProteinModelPortal:Q8HY69 SMR:Q8HY69 Uniprot:Q8HY69
Length = 348
Score = 102 (41.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
PLT I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PLTVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSDFGPIFMTLPAFFAKSSSIYNPVIYIMM 309
>ZFIN|ZDB-GENE-070705-526 [details] [associations]
symbol:opn4xb "opsin 4xb" species:7955 "Danio
rerio" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA;IDA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 ZFIN:ZDB-GENE-070705-526
GO:GO:0016021 GO:GO:0004930 GO:GO:0007601 GO:GO:0009881
GO:GO:0018298 PROSITE:PS00238 KO:K04255 EMBL:GQ925719
RefSeq:NP_001245152.1 UniGene:Dr.42169 GeneID:563080
KEGG:dre:563080 CTD:563080 Uniprot:G8Z413
Length = 460
Score = 103 (41.3 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 50 LNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKFLVDSRI 109
+ S + A+I ++++ ++L+W PYA +T + G ++TP+ PA+ AK S I
Sbjct: 233 MRSEWKLAKIAAVVIVVYVLSWAPYACVTLVAWAGHQDVLTPYSKTLPAVLAK---SSAI 289
Query: 110 Y 110
Y
Sbjct: 290 Y 290
>FB|FBgn0036260 [details] [associations]
symbol:Rh7 "Rhodopsin 7" species:7227 "Drosophila
melanogaster" [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=ISS] [GO:0007601 "visual perception"
evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 EMBL:AE014296
GO:GO:0007601 GO:GO:0018298 GO:GO:0008020 PROSITE:PS00238
GeneTree:ENSGT00700000104057 KO:K04255 EMBL:AY060299
RefSeq:NP_524035.2 UniGene:Dm.2696 SMR:Q9VTU7 STRING:Q9VTU7
EnsemblMetazoa:FBtr0076020 GeneID:39389 KEGG:dme:Dmel_CG5638
UCSC:CG5638-RA CTD:39389 FlyBase:FBgn0036260 eggNOG:NOG249214
InParanoid:Q9VTU7 OMA:ARIFMAL OrthoDB:EOG4F1VJJ GenomeRNAi:39389
NextBio:813399 Uniprot:Q9VTU7
Length = 483
Score = 103 (41.3 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 28/87 (32%), Positives = 40/87 (45%)
Query: 30 VVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFL----LAWTPYAVITFIGQFGD 85
+V +Y K+ R +T Q L +V + LAW+PYA++ +G FG
Sbjct: 298 IVYSYFYILKVVFTASRIQSNKDKAKTEQKLAFIVAAIIGLWFLAWSPYAIVAMMGVFGL 357
Query: 86 ASLITPWVSATPAIFAKFL--VDSRIY 110
ITP S PA+F K VD +Y
Sbjct: 358 ERHITPLGSMIPALFCKTAACVDPYLY 384
>UNIPROTKB|Q68J47 [details] [associations]
symbol:RHO "Rhodopsin" species:9785 "Loxodonta africana"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0007186 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602
GO:GO:0042622 HOGENOM:HOG000253932 HOVERGEN:HBG107442
PROSITE:PS00238 OrthoDB:EOG4P5K9D GO:GO:0060342 InterPro:IPR019477
Pfam:PF10413 EMBL:AY686752 ProteinModelPortal:Q68J47 SMR:Q68J47
Uniprot:Q68J47
Length = 348
Score = 101 (40.6 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
P+T I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PMTIIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P + PA FAK + + IYI++
Sbjct: 274 YIFTHQGSDFGPILMTLPAFFAKSSAIYNPVIYIMM 309
>ZFIN|ZDB-GENE-091204-311 [details] [associations]
symbol:si:ch73-52f15.6 "si:ch73-52f15.6"
species:7955 "Danio rerio" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR000276
InterPro:IPR001760 InterPro:IPR002962 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01244 PROSITE:PS00237
PROSITE:PS50262 ZFIN:ZDB-GENE-091204-311 GO:GO:0016021
GO:GO:0004930 GO:GO:0007601 GO:GO:0009881 GO:GO:0018298
PROSITE:PS00238 GeneTree:ENSGT00700000104057 KO:K04256
EMBL:CU468967 IPI:IPI00901491 RefSeq:XP_688823.3
ProteinModelPortal:E7FF02 Ensembl:ENSDART00000123195 GeneID:560330
KEGG:dre:560330 NextBio:20883389 Uniprot:E7FF02
Length = 357
Score = 101 (40.6 bits), Expect = 9.7e-05, P = 9.6e-05
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 39 KLAMPIHRATPLNSAV---RTAQILLM---LVICFLLAWTPYAVITFIGQFGDASLITPW 92
K+ + IH +N R +L+M +V C+LL W PY V+ +G F A + +P
Sbjct: 219 KILIAIHGVAKINQTAAQRRETHVLVMVVSMVSCYLLCWMPYGVMALLGTFS-AGITSPT 277
Query: 93 VSATPAIFAKF--LVDSRIYIL 112
S ++ AK +++ IY+L
Sbjct: 278 ASVVSSLLAKSSTVLNPIIYVL 299
>UNIPROTKB|F1NEY8 [details] [associations]
symbol:OPN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007601 "visual perception" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005502 "11-cis
retinal binding" evidence=IEA] [GO:0007602 "phototransduction"
evidence=IEA] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601
GO:GO:0042752 GO:GO:0018298 GO:GO:0007602 GO:GO:0008020
PROSITE:PS00238 GeneTree:ENSGT00690000101836 GO:GO:0005502
OMA:VLTPYMN EMBL:AADN02043541 EMBL:AADN02043540 IPI:IPI00576171
ProteinModelPortal:F1NEY8 Ensembl:ENSGALT00000002989 Uniprot:F1NEY8
Length = 528
Score = 103 (41.3 bits), Expect = 0.00010, P = 0.00010
Identities = 14/48 (29%), Positives = 36/48 (75%)
Query: 55 RTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
+ A+I L++++ ++++W+PY+V+ + G + ++TP++++ PA+ AK
Sbjct: 253 KLAKIALIVILLYVISWSPYSVVALVAFAGYSHVLTPFMNSVPAVIAK 300
>ZFIN|ZDB-GENE-080415-3 [details] [associations]
symbol:opn4b "opsin 4b" species:7955 "Danio rerio"
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA;IDA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 ZFIN:ZDB-GENE-080415-3
GO:GO:0016021 GO:GO:0004930 GO:GO:0007601 GO:GO:0009881
GO:GO:0018298 PROSITE:PS00238 EMBL:GQ925717 RefSeq:NP_001245153.1
UniGene:Dr.162309 ProteinModelPortal:G8Z411 GeneID:100884131
KEGG:dre:100884131 CTD:100884131 Bgee:G8Z411 Uniprot:G8Z411
Length = 565
Score = 103 (41.3 bits), Expect = 0.00011, P = 0.00011
Identities = 17/59 (28%), Positives = 39/59 (66%)
Query: 44 IHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
IHR + + + A+I L++++ ++++W+PY+ + G A ++TP++++ PA+ AK
Sbjct: 283 IHR---MKNEWKMAKIALIVILLYVISWSPYSCVALTAFAGYADMLTPYMNSVPAVIAK 338
>UNIPROTKB|F1NB72 [details] [associations]
symbol:COPN5L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007601 "visual perception" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR000276
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PROSITE:PS50262 GO:GO:0016021 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 PROSITE:PS00238
GeneTree:ENSGT00690000101836 EMBL:AADN02018247 IPI:IPI00581519
Ensembl:ENSGALT00000031534 OMA:YNPFIYY Uniprot:F1NB72
Length = 303
Score = 98 (39.6 bits), Expect = 0.00016, P = 0.00016
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 19 PPLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLV-ICFLLAWTPYAVI 77
P LT + G+ AY+ I+R + ++ +L+ + FL AWTPYA
Sbjct: 168 PALTIVACYLGIAWKVHKAYQEIQNINRIPHAAKLEKKLTLMAVLISVGFLSAWTPYAAA 227
Query: 78 TFIGQFGDASLITPWVSATPAIFAK 102
+F F + + P V+ P +FAK
Sbjct: 228 SFWSIFNSSDSLQPIVTLLPCLFAK 252
>UNIPROTKB|P28683 [details] [associations]
symbol:PRA1 "Green-sensitive opsin" species:9031 "Gallus
gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007602 "phototransduction" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR000276 InterPro:IPR000732
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262
GO:GO:0016021 GO:GO:0004930 GO:GO:0007601 GO:GO:0009881
GO:GO:0018298 GO:GO:0007602 HOGENOM:HOG000253932 HOVERGEN:HBG107442
PROSITE:PS00238 GeneTree:ENSGT00700000104057 CTD:6010
eggNOG:NOG311294 KO:K04250 InterPro:IPR019477 Pfam:PF10413
OrthoDB:EOG444KKQ OMA:LLVTFKH EMBL:M92038 EMBL:M88178
IPI:IPI00597184 PIR:A42347 RefSeq:NP_990821.1 UniGene:Gga.852
ProteinModelPortal:P28683 SMR:P28683 STRING:P28683
Ensembl:ENSGALT00000004492 GeneID:396486 KEGG:gga:396486
InParanoid:P28683 NextBio:20816525 Uniprot:P28683
Length = 355
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 47 ATPLNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKF--L 104
AT + ++++++V+ F+LAWTPYAV+ F + T + A PA F+K L
Sbjct: 241 ATTQKAEKEVTRMVILMVLGFMLAWTPYAVVAFWIFTNKGADFTATLMAVPAFFSKSSSL 300
Query: 105 VDSRIYILV 113
+ IY+L+
Sbjct: 301 YNPIIYVLM 309
>UNIPROTKB|F1PZ49 [details] [associations]
symbol:OPN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] InterPro:IPR000276
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0004930
GO:GO:0007601 GO:GO:0009881 GO:GO:0018298 PROSITE:PS00238
GeneTree:ENSGT00700000104057 OMA:TFLICWM EMBL:AAEX03005241
Ensembl:ENSCAFT00000024909 Uniprot:F1PZ49
Length = 379
Score = 97 (39.2 bits), Expect = 0.00029, P = 0.00029
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 55 RTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKF--LVDSRIYIL 112
+ A++ +++ FL+ W PY VI F+ G L+TP VS +FAK + + IYI+
Sbjct: 229 KVAKMCFLMIFIFLIFWMPYIVICFLVVNGYGHLVTPTVSIVSYLFAKSSTVYNPVIYII 288
Query: 113 VL 114
++
Sbjct: 289 MI 290
>UNIPROTKB|P49912 [details] [associations]
symbol:RHO "Rhodopsin" species:9986 "Oryctolagus cuniculus"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0005794 GO:GO:0046872 GO:GO:0004930
GO:GO:0007601 GO:GO:0006468 GO:GO:0060041 GO:GO:0009881
GO:GO:0018298 GO:GO:0007602 GO:GO:0042622 GO:GO:0071482
HOGENOM:HOG000253932 HOVERGEN:HBG107442 PROSITE:PS00238
GeneTree:ENSGT00700000104057 CTD:6010 eggNOG:NOG311294 OMA:LAAYMFM
OrthoDB:EOG4P5K9D GO:GO:0060342 InterPro:IPR019477 Pfam:PF10413
EMBL:U21688 PIR:JC4267 RefSeq:NP_001075818.1 UniGene:Ocu.915
ProteinModelPortal:P49912 SMR:P49912 Ensembl:ENSOCUT00000013032
GeneID:100009200 Uniprot:P49912
Length = 348
Score = 96 (38.9 bits), Expect = 0.00032, P = 0.00032
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
PL I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PLIIIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPIFMTIPAFFAKSSSIYNPVIYIMM 309
>UNIPROTKB|O18766 [details] [associations]
symbol:RHO "Rhodopsin" species:9823 "Sus scrofa"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0071482
"cellular response to light stimulus" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0007602
"phototransduction" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] InterPro:IPR000276 InterPro:IPR000732
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262
GO:GO:0016021 GO:GO:0005886 GO:GO:0005794 GO:GO:0046872
GO:GO:0004930 GO:GO:0007601 GO:GO:0006468 GO:GO:0007186
GO:GO:0060041 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602
GO:GO:0042622 GO:GO:0071482 HOGENOM:HOG000253932 HOVERGEN:HBG107442
PROSITE:PS00238 GeneTree:ENSGT00700000104057 CTD:6010
eggNOG:NOG311294 KO:K04250 OMA:LAAYMFM OrthoDB:EOG4P5K9D
GO:GO:0060342 InterPro:IPR019477 Pfam:PF10413 EMBL:AF008947
RefSeq:NP_999386.1 UniGene:Ssc.16150 ProteinModelPortal:O18766
SMR:O18766 STRING:O18766 Ensembl:ENSSSCT00000012686 GeneID:397437
KEGG:ssc:397437 ArrayExpress:O18766 Uniprot:O18766
Length = 348
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 18 SPPLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVI 77
S PL I C G + +T+ A AT + ++++++V+ FL+ W PYA +
Sbjct: 213 SIPLVIIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASV 271
Query: 78 TFIGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
F S P PA FAK + + IYI++
Sbjct: 272 AFYIFTHQGSDFGPIFMTIPAFFAKSASIYNPVIYIMM 309
>UNIPROTKB|O62794 [details] [associations]
symbol:RHO "Rhodopsin" species:9720 "Phoca vitulina"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622
HOVERGEN:HBG107442 PROSITE:PS00238 GO:GO:0060342 InterPro:IPR019477
Pfam:PF10413 EMBL:AF055317 ProteinModelPortal:O62794 SMR:O62794
Uniprot:O62794
Length = 348
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
P+ I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PMIVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPIFMTLPAFFAKAASIYNPVIYIMM 309
>UNIPROTKB|O62796 [details] [associations]
symbol:RHO "Rhodopsin" species:9778 "Trichechus manatus"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622
HOVERGEN:HBG107442 PROSITE:PS00238 GO:GO:0060342 InterPro:IPR019477
Pfam:PF10413 EMBL:AF055319 ProteinModelPortal:O62796 SMR:O62796
Uniprot:O62796
Length = 348
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
P+ I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PMIVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPIFMTLPAFFAKSASIYNPVIYIMM 309
>UNIPROTKB|Q6W3E1 [details] [associations]
symbol:RHO "Rhodopsin" species:70610 "Caluromys philander"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0007186 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602
GO:GO:0042622 HOVERGEN:HBG107442 PROSITE:PS00238 GO:GO:0060342
InterPro:IPR019477 Pfam:PF10413 EMBL:AY313946
ProteinModelPortal:Q6W3E1 SMR:Q6W3E1 Uniprot:Q6W3E1
Length = 348
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
P+ I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PMVVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P + PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPILMTLPAFFAKTSAVYNPVIYIML 309
>UNIPROTKB|Q95KU1 [details] [associations]
symbol:RHO "Rhodopsin" species:9685 "Felis catus"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0005794 GO:GO:0046872 GO:GO:0004930
GO:GO:0007601 GO:GO:0006468 GO:GO:0007186 GO:GO:0060041
GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622
GO:GO:0071482 HOGENOM:HOG000253932 HOVERGEN:HBG107442
PROSITE:PS00238 GeneTree:ENSGT00700000104057 CTD:6010
eggNOG:NOG311294 OrthoDB:EOG4P5K9D GO:GO:0060342 InterPro:IPR019477
Pfam:PF10413 EMBL:AJ417432 RefSeq:NP_001009242.1
ProteinModelPortal:Q95KU1 SMR:Q95KU1 STRING:Q95KU1
Ensembl:ENSFCAT00000000092 GeneID:493762 KEGG:fca:493762
Uniprot:Q95KU1
Length = 348
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
P+ I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PMIVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMM 309
>ZFIN|ZDB-GENE-081105-91 [details] [associations]
symbol:si:ch211-37p17.5 "si:ch211-37p17.5"
species:7955 "Danio rerio" [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
InterPro:IPR000276 InterPro:IPR001760 InterPro:IPR002962
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01244
PROSITE:PS50262 ZFIN:ZDB-GENE-081105-91 GO:GO:0016021 GO:GO:0004930
GO:GO:0007601 GO:GO:0009881 GO:GO:0018298 PROSITE:PS00238
GeneTree:ENSGT00690000101836 EMBL:BX957316 IPI:IPI00775151
ProteinModelPortal:F1QAS9 Ensembl:ENSDART00000141691 Uniprot:F1QAS9
Length = 374
Score = 95 (38.5 bits), Expect = 0.00046, P = 0.00046
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 51 NSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKFLVDSRIY 110
N+ + ++ + + I FL AW+PYAV+ FG+ + P A AIFAK S IY
Sbjct: 202 NAHILIVKLSVAVCIGFLTAWSPYAVVAMWAAFGEPDNVPPMAFALAAIFAK---SSTIY 258
>UNIPROTKB|F1NEL9 [details] [associations]
symbol:RRH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007601 "visual perception" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR002962 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01244 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0004930 GO:GO:0007601 GO:GO:0009881 GO:GO:0018298
PROSITE:PS00238 GeneTree:ENSGT00690000101836 OMA:AGCQIYA
EMBL:AADN02009351 IPI:IPI00599831 ProteinModelPortal:F1NEL9
Ensembl:ENSGALT00000019889 Uniprot:F1NEL9
Length = 334
Score = 94 (38.1 bits), Expect = 0.00050, P = 0.00050
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 54 VRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
V ++ +++++ FL+AW+PY+++ FGD I+P ++ +FAK
Sbjct: 236 VDVTKMSVVMIVMFLVAWSPYSIVCLWSSFGDPKKISPAMAIIAPLFAK 284
>UNIPROTKB|Q9H1Y3 [details] [associations]
symbol:OPN3 "Opsin-3" species:9606 "Homo sapiens"
[GO:0007601 "visual perception" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=NAS] [GO:0007602
"phototransduction" evidence=NAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=NAS] [GO:0009583 "detection of
light stimulus" evidence=NAS] [GO:0042752 "regulation of circadian
rhythm" evidence=NAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0004930 "G-protein coupled receptor
activity" evidence=TAS] [GO:0009584 "detection of visible light"
evidence=NAS] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PROSITE:PS00237
PROSITE:PS50262 Reactome:REACT_111102 GO:GO:0005887 GO:GO:0007601
GO:GO:0042752 GO:GO:0018298 GO:GO:0007602 GO:GO:0008020
EMBL:AL133390 PROSITE:PS00238 EMBL:AF140242 EMBL:AF303588
EMBL:AF482426 EMBL:BC036773 IPI:IPI00217348 IPI:IPI00300717
RefSeq:NP_055137.2 UniGene:Hs.409081 ProteinModelPortal:Q9H1Y3
SMR:Q9H1Y3 STRING:Q9H1Y3 PhosphoSite:Q9H1Y3 DMDM:17380172
PRIDE:Q9H1Y3 DNASU:23596 Ensembl:ENST00000331838
Ensembl:ENST00000366554 GeneID:23596 KEGG:hsa:23596 UCSC:uc001hza.3
CTD:23596 GeneCards:GC01M241753 HGNC:HGNC:14007 HPA:CAB013682
MIM:606695 neXtProt:NX_Q9H1Y3 PharmGKB:PA31939 eggNOG:NOG250907
HOGENOM:HOG000029042 HOVERGEN:HBG100337 InParanoid:Q9H1Y3 KO:K04256
OMA:TFLICWM PhylomeDB:Q9H1Y3 GenomeRNAi:23596 NextBio:46258
Bgee:Q9H1Y3 CleanEx:HS_OPN3 Genevestigator:Q9H1Y3
GermOnline:ENSG00000054277 Uniprot:Q9H1Y3
Length = 402
Score = 95 (38.5 bits), Expect = 0.00052, P = 0.00052
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 55 RTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAKF--LVDSRIYIL 112
+ A++ +++ FL+ W PY VI F+ G L+TP +S +FAK + + IY+
Sbjct: 252 KLAKMCFLMIFTFLVCWMPYIVICFLVVNGHGHLVTPTISIVSYLFAKSNTVYNPVIYVF 311
Query: 113 VL 114
++
Sbjct: 312 MI 313
>UNIPROTKB|E2R3W5 [details] [associations]
symbol:OPN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=IEA] [GO:0007602 "phototransduction"
evidence=IEA] [GO:0005502 "11-cis retinal binding" evidence=IEA]
[GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0007601
GO:GO:0042752 GO:GO:0018298 GO:GO:0007602 GO:GO:0008020
PROSITE:PS00238 GeneTree:ENSGT00690000101836 GO:GO:0005502
OMA:VLTPYMN EMBL:AAEX03002925 ProteinModelPortal:E2R3W5
Ensembl:ENSCAFT00000025328 Uniprot:E2R3W5
Length = 481
Score = 96 (38.9 bits), Expect = 0.00052, P = 0.00052
Identities = 14/48 (29%), Positives = 33/48 (68%)
Query: 55 RTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
+ A++ L++++ F+L+W PY+ + G + ++TP++++ PA+ AK
Sbjct: 288 KMAKMELLVILLFVLSWAPYSAVALTAFAGYSHVLTPYMNSVPAVIAK 335
>UNIPROTKB|P32308 [details] [associations]
symbol:RHO "Rhodopsin" species:9615 "Canis lupus
familiaris" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0071482
"cellular response to light stimulus" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0007602
"phototransduction" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] InterPro:IPR000276 InterPro:IPR000732
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262
GO:GO:0016021 GO:GO:0005886 GO:GO:0005794 GO:GO:0046872
GO:GO:0004930 GO:GO:0007601 GO:GO:0006468 GO:GO:0060041
GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622
GO:GO:0071482 HOGENOM:HOG000253932 HOVERGEN:HBG107442
PROSITE:PS00238 GeneTree:ENSGT00700000104057 CTD:6010
eggNOG:NOG311294 KO:K04250 OrthoDB:EOG4P5K9D GO:GO:0060342
InterPro:IPR019477 Pfam:PF10413 EMBL:X71380 EMBL:Y09004
EMBL:AY092841 PIR:S32696 RefSeq:NP_001008277.1 UniGene:Cfa.7396
ProteinModelPortal:P32308 SMR:P32308 STRING:P32308
Ensembl:ENSCAFT00000007461 GeneID:493763 KEGG:cfa:493763
NextBio:20865480 Uniprot:P32308
Length = 348
Score = 94 (38.1 bits), Expect = 0.00053, P = 0.00053
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
P+ I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PMIVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSDFGPIFMTLPAFFAKSSSIYNPVIYIMM 309
>UNIPROTKB|P08100 [details] [associations]
symbol:RHO "Rhodopsin" species:9606 "Homo sapiens"
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0016056 "rhodopsin mediated signaling pathway"
evidence=IEA] [GO:0016918 "retinal binding" evidence=IEA]
[GO:0030867 "rough endoplasmic reticulum membrane" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0060342 "photoreceptor inner segment membrane" evidence=IDA]
[GO:0042622 "photoreceptor outer segment membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005887 "integral
to plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0007603
"phototransduction, visible light" evidence=TAS] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA;TAS] InterPro:IPR000276 InterPro:IPR000732
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262
GO:GO:0005794 Reactome:REACT_111102 GO:GO:0005887 GO:GO:0046872
GO:GO:0004930 GO:GO:0007601 GO:GO:0006468 Orphanet:791
GO:GO:0060041 GO:GO:0009881 GO:GO:0018298 DrugBank:DB01159
Pathway_Interaction_DB:rhodopsin_pathway GO:GO:0016056 Orphanet:215
GO:GO:0042622 HOGENOM:HOG000253932 HOVERGEN:HBG107442
PROSITE:PS00238 CTD:6010 eggNOG:NOG311294 KO:K04250 OMA:LAAYMFM
OrthoDB:EOG4P5K9D GO:GO:0060342 InterPro:IPR019477 Pfam:PF10413
EMBL:U49742 EMBL:AB065668 EMBL:BX537381 EMBL:BC112104 EMBL:BC112106
EMBL:U16824 EMBL:S81166 IPI:IPI00027391 PIR:A41200
RefSeq:NP_000530.1 UniGene:Hs.247565 ProteinModelPortal:P08100
SMR:P08100 IntAct:P08100 STRING:P08100 GlycoSuiteDB:P08100
PhosphoSite:P08100 DMDM:129207 PRIDE:P08100 DNASU:6010
Ensembl:ENST00000296271 GeneID:6010 KEGG:hsa:6010 UCSC:uc003emt.3
GeneCards:GC03P129247 HGNC:HGNC:10012 MIM:180380 MIM:610445
MIM:613731 neXtProt:NX_P08100 Orphanet:52427 PharmGKB:PA34390
InParanoid:P08100 PhylomeDB:P08100 GenomeRNAi:6010 NextBio:23449
Bgee:P08100 CleanEx:HS_RHO Genevestigator:P08100
GermOnline:ENSG00000163914 Uniprot:P08100
Length = 348
Score = 94 (38.1 bits), Expect = 0.00053, P = 0.00053
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
P+ I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PMIIIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMM 309
>UNIPROTKB|P02700 [details] [associations]
symbol:RHO "Rhodopsin" species:9940 "Ovis aries"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622
HOVERGEN:HBG107442 PROSITE:PS00238 GO:GO:0060342 InterPro:IPR019477
Pfam:PF10413 PIR:A30407 ProteinModelPortal:P02700 SMR:P02700
Uniprot:P02700
Length = 348
Score = 94 (38.1 bits), Expect = 0.00053, P = 0.00053
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 18 SPPLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVI 77
S PL I C G + +T+ A AT + ++++++VI FL+ W PYA +
Sbjct: 213 SIPLIVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGV 271
Query: 78 TFIGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
F S P PA FAK + + IYI++
Sbjct: 272 AFYIFTHQGSDFGPIFMTIPAFFAKSSSVYNPVIYIMM 309
>UNIPROTKB|Q28886 [details] [associations]
symbol:RHO "Rhodopsin" species:9541 "Macaca fascicularis"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0007186 GO:GO:0009881 GO:GO:0018298 GO:GO:0007602
GO:GO:0042622 HOVERGEN:HBG107442 PROSITE:PS00238 GO:GO:0060342
InterPro:IPR019477 Pfam:PF10413 EMBL:S76579
ProteinModelPortal:Q28886 SMR:Q28886 Uniprot:Q28886
Length = 348
Score = 94 (38.1 bits), Expect = 0.00053, P = 0.00053
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
P+ I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PMIVIFFCYGQLV-FTVKEARAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPIFMTIPAFFAKSASIYNPVIYIMM 309
>UNIPROTKB|Q769E8 [details] [associations]
symbol:RHO "Rhodopsin" species:9463 "Otolemur
crassicaudatus" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0042622 "photoreceptor outer segment membrane"
evidence=ISS] [GO:0060342 "photoreceptor inner segment membrane"
evidence=ISS] InterPro:IPR000276 InterPro:IPR000732
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262
GO:GO:0016021 GO:GO:0005886 GO:GO:0046872 GO:GO:0004930
GO:GO:0007601 GO:GO:0007186 GO:GO:0009881 GO:GO:0018298
GO:GO:0007602 GO:GO:0042622 HOVERGEN:HBG107442 PROSITE:PS00238
GO:GO:0060342 InterPro:IPR019477 Pfam:PF10413 EMBL:AB112594
EMBL:AB112591 ProteinModelPortal:Q769E8 SMR:Q769E8 Uniprot:Q769E8
Length = 348
Score = 94 (38.1 bits), Expect = 0.00053, P = 0.00053
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
PL I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PLFVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPIFMTLPAFFAKTASIYNPVIYIMM 309
>ZFIN|ZDB-GENE-070111-2 [details] [associations]
symbol:opn4a "opsin 4a (melanopsin)" species:7955
"Danio rerio" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0007602
"phototransduction" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA;IDA] InterPro:IPR000276 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PROSITE:PS00237 PROSITE:PS50262 ZFIN:ZDB-GENE-070111-2
GO:GO:0016021 GO:GO:0007601 GO:GO:0018298 GO:GO:0008020
PROSITE:PS00238 GeneTree:ENSGT00690000101836 EMBL:BX649277
EMBL:CT573135 IPI:IPI00899321 Ensembl:ENSDART00000122687
Bgee:F1QGX5 Uniprot:F1QGX5
Length = 594
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 14/53 (26%), Positives = 35/53 (66%)
Query: 50 LNSAVRTAQILLMLVICFLLAWTPYAVITFIGQFGDASLITPWVSATPAIFAK 102
L + + A+I L++++ ++++W+PY+ + G + +TP++++ PA+ AK
Sbjct: 293 LKNEWKMAKIALIVILMYVISWSPYSTVALTAFAGYSDFLTPYMNSVPAVIAK 345
>UNIPROTKB|P02699 [details] [associations]
symbol:RHO "Rhodopsin" species:9913 "Bos taurus"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0071482 "cellular response to
light stimulus" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0007602 "phototransduction"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] InterPro:IPR000276
InterPro:IPR000732 InterPro:IPR001760 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238 PRINTS:PR00579
PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021 GO:GO:0005886
GO:GO:0005794 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0006468 GO:GO:0060041 GO:GO:0009881 GO:GO:0018298
GO:GO:0007602 GO:GO:0042622 GO:GO:0071482 PDB:2X72 PDB:3DQB
PDB:3PQR PDBsum:2X72 PDBsum:3DQB PDBsum:3PQR PDB:4A4M PDBsum:4A4M
HOGENOM:HOG000253932 HOVERGEN:HBG107442 PROSITE:PS00238
GeneTree:ENSGT00700000104057 EMBL:K00506 EMBL:K00502 EMBL:K00503
EMBL:K00504 EMBL:K00505 EMBL:M21606 IPI:IPI00712873 PIR:A90840
RefSeq:NP_001014890.1 UniGene:Bt.12753 PDB:1BOJ PDB:1BOK PDB:1EDS
PDB:1EDV PDB:1EDW PDB:1EDX PDB:1F88 PDB:1FDF PDB:1GZM PDB:1HZX
PDB:1JFP PDB:1L9H PDB:1LN6 PDB:1N3M PDB:1NZS PDB:1OV0 PDB:1OV1
PDB:1U19 PDB:1VQX PDB:2G87 PDB:2HPY PDB:2I35 PDB:2I36 PDB:2I37
PDB:2IQK PDB:2J4Y PDB:2PED PDB:3C9L PDB:3C9M PDB:3CAP PDB:3OAX
PDB:3PXO PDBsum:1BOJ PDBsum:1BOK PDBsum:1EDS PDBsum:1EDV
PDBsum:1EDW PDBsum:1EDX PDBsum:1F88 PDBsum:1FDF PDBsum:1GZM
PDBsum:1HZX PDBsum:1JFP PDBsum:1L9H PDBsum:1LN6 PDBsum:1N3M
PDBsum:1NZS PDBsum:1OV0 PDBsum:1OV1 PDBsum:1U19 PDBsum:1VQX
PDBsum:2G87 PDBsum:2HPY PDBsum:2I35 PDBsum:2I36 PDBsum:2I37
PDBsum:2IQK PDBsum:2J4Y PDBsum:2PED PDBsum:3C9L PDBsum:3C9M
PDBsum:3CAP PDBsum:3OAX PDBsum:3PXO DisProt:DP00271
ProteinModelPortal:P02699 SMR:P02699 DIP:DIP-29225N STRING:P02699
GlycoSuiteDB:P02699 Ensembl:ENSBTAT00000001730 GeneID:509933
KEGG:bta:509933 CTD:6010 eggNOG:NOG311294 InParanoid:P02699
KO:K04250 OMA:LAAYMFM OrthoDB:EOG4P5K9D BindingDB:P02699
ChEMBL:CHEMBL5739 EvolutionaryTrace:P02699 NextBio:20869202
GO:GO:0060342 InterPro:IPR019477 Pfam:PF10413 Uniprot:P02699
Length = 348
Score = 93 (37.8 bits), Expect = 0.00068, P = 0.00068
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
PL I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PLIVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMM 309
>UNIPROTKB|O62791 [details] [associations]
symbol:RHO "Rhodopsin" species:9728 "Delphinus delphis"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622
HOVERGEN:HBG107442 PROSITE:PS00238 GO:GO:0060342 InterPro:IPR019477
Pfam:PF10413 EMBL:AF055314 ProteinModelPortal:O62791 SMR:O62791
Uniprot:O62791
Length = 348
Score = 92 (37.4 bits), Expect = 0.00088, P = 0.00088
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
PL I C G + +T+ A AT + ++++++V+ FL+ W PYA + F
Sbjct: 215 PLVIIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P P+ FAK + + IYI++
Sbjct: 274 YIFTHQGSDFGPIFMTIPSFFAKSSSIYNPVIYIMM 309
>UNIPROTKB|O62792 [details] [associations]
symbol:RHO "Rhodopsin" species:9731 "Globicephala melas"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622
HOVERGEN:HBG107442 PROSITE:PS00238 GO:GO:0060342 InterPro:IPR019477
Pfam:PF10413 EMBL:AF055315 ProteinModelPortal:O62792 SMR:O62792
Uniprot:O62792
Length = 348
Score = 92 (37.4 bits), Expect = 0.00088, P = 0.00088
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
PL I C G + +T+ A AT + ++++++V+ FL+ W PYA + F
Sbjct: 215 PLVIIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P P+ FAK + + IYI++
Sbjct: 274 YIFTHQGSDFGPIFMTIPSFFAKSSSIYNPVIYIMM 309
>UNIPROTKB|O62798 [details] [associations]
symbol:RHO "Rhodopsin" species:9739 "Tursiops truncatus"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0005794 GO:GO:0046872 GO:GO:0004930
GO:GO:0007601 GO:GO:0006468 GO:GO:0060041 GO:GO:0009881
GO:GO:0018298 GO:GO:0007602 GO:GO:0042622 GO:GO:0071482
HOGENOM:HOG000253932 HOVERGEN:HBG107442 PROSITE:PS00238
GeneTree:ENSGT00700000104057 OrthoDB:EOG4P5K9D GO:GO:0060342
InterPro:IPR019477 Pfam:PF10413 EMBL:AF055456 PDB:1RY1 PDBsum:1RY1
ProteinModelPortal:O62798 SMR:O62798 Ensembl:ENSTTRT00000011272
EvolutionaryTrace:O62798 Uniprot:O62798
Length = 348
Score = 92 (37.4 bits), Expect = 0.00088, P = 0.00088
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
PL I C G + +T+ A AT + ++++++V+ FL+ W PYA + F
Sbjct: 215 PLVIIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P P+ FAK + + IYI++
Sbjct: 274 YIFTHQGSDFGPIFMTIPSFFAKSSSIYNPVIYIMM 309
>UNIPROTKB|P28681 [details] [associations]
symbol:RHO "Rhodopsin" species:10029 "Cricetulus griseus"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISS] [GO:0060342
"photoreceptor inner segment membrane" evidence=ISS]
InterPro:IPR000276 InterPro:IPR000732 InterPro:IPR001760
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00238
PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262 GO:GO:0016021
GO:GO:0005886 GO:GO:0046872 GO:GO:0004930 GO:GO:0007601
GO:GO:0009881 GO:GO:0018298 GO:GO:0007602 GO:GO:0042622
HOVERGEN:HBG107442 PROSITE:PS00238 CTD:6010 GO:GO:0060342
InterPro:IPR019477 Pfam:PF10413 EMBL:X61084 PIR:S23398
RefSeq:NP_001231336.1 ProteinModelPortal:P28681 SMR:P28681
GeneID:100689279 Uniprot:P28681
Length = 348
Score = 92 (37.4 bits), Expect = 0.00088, P = 0.00088
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
PL I C G + +T+ A AT + ++++++V+ FL+ W PYA + F
Sbjct: 215 PLIVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVILMVVFFLICWFPYAGVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMM 309
>MGI|MGI:97914 [details] [associations]
symbol:Rho "rhodopsin" species:10090 "Mus musculus"
[GO:0001750 "photoreceptor outer segment" evidence=ISO;IDA]
[GO:0001917 "photoreceptor inner segment" evidence=ISO;IDA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007602
"phototransduction" evidence=IMP] [GO:0007603 "phototransduction,
visible light" evidence=ISO] [GO:0009416 "response to light
stimulus" evidence=IMP] [GO:0009583 "detection of light stimulus"
evidence=IMP] [GO:0009585 "red, far-red light phototransduction"
evidence=ISO] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016056 "rhodopsin mediated signaling
pathway" evidence=ISO] [GO:0016918 "retinal binding" evidence=ISO]
[GO:0018298 "protein-chromophore linkage" evidence=IEA] [GO:0030867
"rough endoplasmic reticulum membrane" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0060342 "photoreceptor inner
segment membrane" evidence=ISO] [GO:0071482 "cellular response to
light stimulus" evidence=IMP] InterPro:IPR000276 InterPro:IPR000732
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262
MGI:MGI:97914 GO:GO:0016021 GO:GO:0005886 GO:GO:0005794
GO:GO:0046872 GO:GO:0004930 GO:GO:0007601 GO:GO:0006468
GO:GO:0007603 GO:GO:0060041 GO:GO:0009881 GO:GO:0018298
EMBL:CH466523 GO:GO:0007602 GO:GO:0050953 GO:GO:0042622
GO:GO:0071482 HOGENOM:HOG000253932 HOVERGEN:HBG107442
PROSITE:PS00238 GeneTree:ENSGT00700000104057 CTD:6010
eggNOG:NOG311294 KO:K04250 OMA:LAAYMFM OrthoDB:EOG4P5K9D
GO:GO:0060342 InterPro:IPR019477 Pfam:PF10413 EMBL:M36699
EMBL:M36695 EMBL:M36696 EMBL:M36697 EMBL:M36698 EMBL:M55171
EMBL:AK044333 EMBL:AK044412 EMBL:BC013125 EMBL:BC031766
IPI:IPI00130448 PIR:A23665 RefSeq:NP_663358.1 UniGene:Mm.2965
UniGene:Mm.406156 ProteinModelPortal:P15409 SMR:P15409
MINT:MINT-1795197 STRING:P15409 PhosphoSite:P15409 PRIDE:P15409
Ensembl:ENSMUST00000032471 GeneID:212541 KEGG:mmu:212541
InParanoid:Q8K0D8 ChiTaRS:RHO NextBio:373628 Bgee:P15409
CleanEx:MM_RHO Genevestigator:P15409 GermOnline:ENSMUSG00000030324
Uniprot:P15409
Length = 348
Score = 92 (37.4 bits), Expect = 0.00088, P = 0.00088
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
P+ I C G + +T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PMIVIFFCYGQLV-FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIFFLICWLPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIML 309
>UNIPROTKB|P22328 [details] [associations]
symbol:RHO "Rhodopsin" species:9031 "Gallus gallus"
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007602
"phototransduction" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR000276 InterPro:IPR000732
InterPro:IPR001760 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00238 PRINTS:PR00579 PROSITE:PS00237 PROSITE:PS50262
GO:GO:0016021 GO:GO:0004930 GO:GO:0007601 GO:GO:0009881
GO:GO:0018298 GO:GO:0007602 HOVERGEN:HBG107442 PROSITE:PS00238
KO:K04250 InterPro:IPR019477 Pfam:PF10413 EMBL:D00702
IPI:IPI00575339 PIR:S29152 RefSeq:NP_001025777.1 UniGene:Gga.54135
ProteinModelPortal:P22328 SMR:P22328 GeneID:751791 KEGG:gga:751791
NextBio:20917913 Uniprot:P22328
Length = 351
Score = 92 (37.4 bits), Expect = 0.00089, P = 0.00089
Identities = 28/96 (29%), Positives = 43/96 (44%)
Query: 20 PLTKICDCGGVVTNYTLAYKLAMPIHRATPLNSAVRTAQILLMLVICFLLAWTPYAVITF 79
PL I C G + T+ A AT + ++++++VI FL+ W PYA + F
Sbjct: 215 PLAVIFFCYGNLV-CTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF 273
Query: 80 IGQFGDASLITPWVSATPAIFAKF--LVDSRIYILV 113
S P PA FAK + + IYI++
Sbjct: 274 YIFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVM 309
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.330 0.142 0.450 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 114 114 0.00091 102 3 11 21 0.36 30
29 0.44 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 565 (60 KB)
Total size of DFA: 117 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.51u 0.13s 10.64t Elapsed: 00:00:00
Total cpu time: 10.51u 0.13s 10.64t Elapsed: 00:00:00
Start: Thu Aug 15 10:53:47 2013 End: Thu Aug 15 10:53:47 2013