Your job contains 1 sequence.
>psy4257
GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR
ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK
LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ
HNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT
FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTL
RIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQPDSNETSTTTTTTTTTTPEPTP
APTSTTTQRSTTSTTTQTPTTPIQEEYTETITLELPQPVETNNQIPVQDNLEKEKQPDH
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4257
(419 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0052372 - symbol:ltl "larval translucida" species:... 493 1.9e-46 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 298 4.0e-25 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 291 2.2e-24 1
UNIPROTKB|Q7Z2Q7 - symbol:LRRC70 "Leucine-rich repeat-con... 278 1.9e-23 1
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 277 2.2e-23 1
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 276 2.9e-23 1
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 275 3.7e-23 1
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 275 3.7e-23 1
ZFIN|ZDB-GENE-030131-6062 - symbol:lrrc40 "leucine rich r... 274 4.7e-23 1
UNIPROTKB|Q6UXM1 - symbol:LRIG3 "Leucine-rich repeats and... 271 3.2e-22 1
UNIPROTKB|F1P0K8 - symbol:Gga.13956 "Uncharacterized prot... 270 5.6e-22 1
MGI|MGI:107973 - symbol:Igfals "insulin-like growth facto... 268 1.1e-21 1
FB|FBgn0028888 - symbol:CG4168 species:7227 "Drosophila m... 269 3.0e-21 1
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 265 4.1e-21 1
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 265 1.2e-20 1
MGI|MGI:1919006 - symbol:Cpn2 "carboxypeptidase N, polype... 258 3.8e-20 1
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 258 5.0e-20 1
UNIPROTKB|F1NRN7 - symbol:SHOC2 "Leucine-rich repeat prot... 256 6.3e-20 1
UNIPROTKB|E1BU15 - symbol:SHOC2 "Leucine-rich repeat prot... 256 8.1e-20 1
UNIPROTKB|O94898 - symbol:LRIG2 "Leucine-rich repeats and... 258 1.4e-19 1
FB|FBgn0261269 - symbol:conv "convoluted" species:7227 "D... 258 1.4e-19 1
UNIPROTKB|A6QLV3 - symbol:SHOC2 "Leucine-rich repeat prot... 253 2.1e-19 1
UNIPROTKB|Q9UQ13 - symbol:SHOC2 "Leucine-rich repeat prot... 253 2.1e-19 1
UNIPROTKB|F2Z5G0 - symbol:SHOC2 "Uncharacterized protein"... 253 2.1e-19 1
UNIPROTKB|Q5RAV5 - symbol:SHOC2 "Leucine-rich repeat prot... 253 2.1e-19 1
MGI|MGI:2442313 - symbol:Lrrc1 "leucine rich repeat conta... 252 2.1e-19 1
ZFIN|ZDB-GENE-061103-397 - symbol:zgc:153913 "zgc:153913"... 251 2.4e-19 1
RGD|1308146 - symbol:Shoc2 "soc-2 (suppressor of clear) h... 252 2.8e-19 1
UNIPROTKB|Q9BTT6 - symbol:LRRC1 "Leucine-rich repeat-cont... 251 2.9e-19 1
MGI|MGI:3045299 - symbol:Lrrd1 "leucine rich repeats and ... 254 3.3e-19 1
UNIPROTKB|Q5F4C4 - symbol:SHOC2 "Leucine-rich repeat prot... 250 4.1e-19 1
FB|FBgn0085397 - symbol:Fili "Fish-lips" species:7227 "Dr... 252 4.7e-19 1
FB|FBgn0000313 - symbol:chp "chaoptic" species:7227 "Dros... 254 6.3e-19 1
MGI|MGI:1927197 - symbol:Shoc2 "soc-2 (suppressor of clea... 249 6.9e-19 1
UNIPROTKB|E2R260 - symbol:SHOC2 "Uncharacterized protein"... 248 9.1e-19 1
WB|WBGene00022129 - symbol:lron-11 species:6239 "Caenorha... 247 1.0e-18 1
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 247 1.2e-18 1
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 247 1.2e-18 1
FB|FBgn0000709 - symbol:fliI "flightless I" species:7227 ... 249 2.6e-18 1
ZFIN|ZDB-GENE-041111-75 - symbol:lrig2 "leucine-rich repe... 248 2.6e-18 1
ZFIN|ZDB-GENE-050208-523 - symbol:shoc2 "soc-2 suppressor... 244 2.7e-18 1
UNIPROTKB|Q8AVI4 - symbol:shoc2 "Leucine-rich repeat prot... 242 5.0e-18 1
FB|FBgn0004364 - symbol:18w "18 wheeler" species:7227 "Dr... 246 7.0e-18 1
UNIPROTKB|A4D1F6 - symbol:LRRD1 "Leucine-rich repeat and ... 243 8.1e-18 1
RGD|1308812 - symbol:Mfhas1 "malignant fibrous histiocyto... 244 8.4e-18 1
ZFIN|ZDB-GENE-110125-1 - symbol:rxfp1 "relaxin/insulin-li... 242 8.4e-18 1
FB|FBgn0034540 - symbol:Lrt "Leucine-rich tendon-specific... 242 9.6e-18 1
FB|FBgn0034083 - symbol:lbk "lambik" species:7227 "Drosop... 244 1.1e-17 1
UNIPROTKB|E1BKT3 - symbol:Bt.110205 "Uncharacterized prot... 244 1.3e-17 1
MGI|MGI:1098644 - symbol:Mfhas1 "malignant fibrous histio... 242 1.4e-17 1
ZFIN|ZDB-GENE-031113-8 - symbol:lrrc15 "leucine rich repe... 238 1.5e-17 1
MGI|MGI:1914394 - symbol:Lrrc40 "leucine rich repeat cont... 238 1.7e-17 1
UNIPROTKB|F1PLN5 - symbol:FMOD "Uncharacterized protein" ... 232 1.9e-17 1
FB|FBgn0038504 - symbol:Sur-8 "Sur-8" species:7227 "Droso... 238 1.9e-17 1
FB|FBgn0259677 - symbol:CG42346 species:7227 "Drosophila ... 240 4.6e-17 1
UNIPROTKB|O75325 - symbol:LRRN2 "Leucine-rich repeat neur... 235 5.5e-17 1
UNIPROTKB|E7EQW9 - symbol:ERBB2IP "Protein LAP2" species:... 238 6.4e-17 1
UNIPROTKB|Q96RT1 - symbol:ERBB2IP "Protein LAP2" species:... 238 6.7e-17 1
MGI|MGI:1915557 - symbol:Lrriq4 "leucine-rich repeats and... 233 6.7e-17 1
UNIPROTKB|J3KS54 - symbol:FLII "Protein flightless-1 homo... 234 6.9e-17 1
FB|FBgn0263289 - symbol:scrib "scribbled" species:7227 "D... 239 7.2e-17 1
MGI|MGI:2444651 - symbol:Lingo4 "leucine rich repeat and ... 232 8.6e-17 1
WB|WBGene00006593 - symbol:tol-1 species:6239 "Caenorhabd... 236 9.6e-17 1
UNIPROTKB|F1SGM5 - symbol:LGR4 "Uncharacterized protein" ... 234 1.0e-16 1
WB|WBGene00002282 - symbol:let-4 species:6239 "Caenorhabd... 233 1.1e-16 1
UNIPROTKB|F1N365 - symbol:FLII "Uncharacterized protein" ... 235 1.3e-16 1
FB|FBgn0028487 - symbol:f-cup "flyers-cup" species:7227 "... 231 1.5e-16 1
UNIPROTKB|J3QLG3 - symbol:FLII "Protein flightless-1 homo... 234 1.7e-16 1
ZFIN|ZDB-GENE-071212-3 - symbol:flii "flightless I homolo... 234 1.7e-16 1
UNIPROTKB|Q13045 - symbol:FLII "Protein flightless-1 homo... 234 1.7e-16 1
MGI|MGI:1891468 - symbol:Lgr4 "leucine-rich repeat-contai... 232 2.0e-16 1
WB|WBGene00020649 - symbol:sma-10 species:6239 "Caenorhab... 231 2.3e-16 1
MGI|MGI:2443718 - symbol:Lrig2 "leucine-rich repeats and ... 232 2.3e-16 1
FB|FBgn0023095 - symbol:caps "capricious" species:7227 "D... 230 2.3e-16 1
RGD|621818 - symbol:Omd "osteomodulin" species:10116 "Rat... 225 2.4e-16 1
MGI|MGI:1890169 - symbol:Erbb2ip "Erbb2 interacting prote... 233 2.6e-16 1
RGD|1307590 - symbol:Flii "flightless I homolog (Drosophi... 232 3.0e-16 1
MGI|MGI:1342286 - symbol:Flii "flightless I homolog (Dros... 232 3.0e-16 1
WB|WBGene00004929 - symbol:soc-2 species:6239 "Caenorhabd... 227 3.0e-16 1
UNIPROTKB|Q22875 - symbol:soc-2 "Leucine-rich repeat prot... 227 3.0e-16 1
TAIR|locus:2183144 - symbol:AT5G19680 species:3702 "Arabi... 219 3.1e-16 1
WB|WBGene00006366 - symbol:sym-1 species:6239 "Caenorhabd... 228 3.3e-16 1
UNIPROTKB|F1PUU4 - symbol:FLII "Uncharacterized protein" ... 231 3.9e-16 1
UNIPROTKB|J9P2Y3 - symbol:FLII "Uncharacterized protein" ... 231 3.9e-16 1
UNIPROTKB|F1RR92 - symbol:SLIT3 "Uncharacterized protein"... 148 4.0e-16 2
UNIPROTKB|F1P9F0 - symbol:LGR4 "Uncharacterized protein" ... 229 4.1e-16 1
UNIPROTKB|E1BRU5 - symbol:E1BRU5 "Uncharacterized protein... 231 4.4e-16 1
FB|FBgn0010452 - symbol:trn "tartan" species:7227 "Drosop... 227 5.1e-16 1
ZFIN|ZDB-GENE-061103-403 - symbol:erbb2ip "erbb2 interact... 233 5.2e-16 2
RGD|628615 - symbol:Lgr4 "leucine-rich repeat-containing ... 228 5.8e-16 1
UNIPROTKB|Q9Z2H4 - symbol:Lgr4 "Leucine-rich repeat-conta... 228 5.8e-16 1
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 179 6.2e-16 2
FB|FBgn0036494 - symbol:Toll-6 "Toll-6" species:7227 "Dro... 230 6.4e-16 1
FB|FBgn0034476 - symbol:Toll-7 "Toll-7" species:7227 "Dro... 229 7.9e-16 1
UNIPROTKB|Q6EMK4 - symbol:VASN "Vasorin" species:9606 "Ho... 224 9.7e-16 1
ZFIN|ZDB-GENE-030616-572 - symbol:scrib "scribbled homolo... 229 9.8e-16 1
UNIPROTKB|Q6UY18 - symbol:LINGO4 "Leucine-rich repeat and... 223 9.9e-16 1
UNIPROTKB|O77742 - symbol:OMD "Osteomodulin" species:9913... 219 1.2e-15 1
UNIPROTKB|F1SF23 - symbol:LOC100520342 "Uncharacterized p... 220 1.6e-15 1
UNIPROTKB|F1MMM6 - symbol:SLIT3 "Uncharacterized protein"... 141 1.6e-15 3
WARNING: Descriptions of 1074 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0052372 [details] [associations]
symbol:ltl "larval translucida" species:7227 "Drosophila
melanogaster" [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0007474 "imaginal disc-derived wing vein
specification" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005615 GO:GO:0007474 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR026906 Pfam:PF13306 EMBL:BT003535
ProteinModelPortal:Q86P15 SMR:Q86P15 STRING:Q86P15 PaxDb:Q86P15
PRIDE:Q86P15 FlyBase:FBgn0052372 InParanoid:Q86P15
OrthoDB:EOG4NK99V ChiTaRS:ltl ArrayExpress:Q86P15 Bgee:Q86P15
Uniprot:Q86P15
Length = 817
Score = 493 (178.6 bits), Expect = 1.9e-46, P = 1.9e-46
Identities = 109/336 (32%), Positives = 191/336 (56%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L LF+N N + SL+ +L +L+LL+ N+LE LP+++ L +++ + N++
Sbjct: 201 LHNLESLFINANNITSLDDELPDGGQLRLLMAHNNRLERLPANMAGMHSLETVHIHCNQL 260
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
S D +LR L D N++ + +DEF + ++++ + N I S+N SL + KL
Sbjct: 261 RSFDRVLRNAVNLSEVMADNNELEYLAQDEFASCSKVETLQMGCNHIKSLNYSLLPILKL 320
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
S N + EF + ++ GL+ L+T+ LS N+I + G ++ + L L +
Sbjct: 321 KNANFSFNDIEEFSMAELHGLRSLKTLQLSSNRIQRLLPDPRGVQELM----LVNLDLDN 376
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N I++L+GAL G+ L L+L+ N+L + DF G+ L +LD++ N L L+ T
Sbjct: 377 NRIDSLNGALAGLGNLRILNLAGNRLEHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTL 436
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLR 301
LP+L+ L V++N++T+L++DF GLPVLC+A+L +N I I+ +L T+C+ + L
Sbjct: 437 LPSLKILKVAYNNITKLEQDFKGLPVLCQANLTNNQISTISSELVTNTRCKNHNVPGKLE 496
Query: 302 IYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETIC 337
I+L+ NP++CD + + M +I G + C
Sbjct: 497 IHLDDNPIMCDVGLNELCRLMAV--QEARIRGRSQC 530
Score = 218 (81.8 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 75/290 (25%), Positives = 136/290 (46%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L N+L+SL G L L L+ L I N + +L ++ QL L A+NNR+ L
Sbjct: 184 LHLGRNQLESLNGSLHDLHNLESLFINANNITSLDDELPDGGQLRLLMAHNNRLERLPAN 243
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYL 126
+ G+ L+ ++ NQ+ R +N NL + NN++ + + +K+ L +
Sbjct: 244 MAGMHSLETVHIHCNQLRSFDR-VLRNAVNLSEVMADNNELEYLAQDEFASCSKVETLQM 302
Query: 127 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIEN 186
N + L + + +L+ + S+N I +F ++ G+ ++ L+L N I+
Sbjct: 303 GCNHIKS-LNYSLLPILKLKNANFSFNDIEEFSMA-----ELHGLRSLKTLQLSSNRIQR 356
Query: 187 LDGALMGIHGLS--RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
L G+ L LDL +N++ +++ GL +L++L+++ N L L+ +
Sbjct: 357 LLPDPRGVQELMLVNLDLDNNRIDSLN-GALAGLGNLRILNLAGNRLEHLQVGDFDGMIR 415
Query: 245 LEELFVSHNSLTRLDK-DFHGLPVLCKADLAHNNIKAINIQL-ALKTQCQ 292
L+ L ++ N L L + LP L +A+NNI + L CQ
Sbjct: 416 LDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITKLEQDFKGLPVLCQ 465
Score = 166 (63.5 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 70/299 (23%), Positives = 133/299 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
G+ L + ++ N+L+S + L L ++ + N+LE L D S++ +L N
Sbjct: 246 GMHSLETVHIHCNQLRSFDRVLRNAVNLSEVMADNNELEYLAQDEFASCSKVETLQMGCN 305
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
I SL+ L + KL+ N FN I E L +L ++ L +N+I + G+
Sbjct: 306 HIKSLNYSLLPILKLKNANFSFNDIEEFSMAELHGLRSLKTLQLSSNRIQRLLPDPRGVQ 365
Query: 120 KLAYLYLS-HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+L + L N + L + GL LR ++L+ N++ G+ + L
Sbjct: 366 ELMLVNLDLDNNRIDSLNGALAGLGNLRILNLAGNRLEHLQV-----GDFDGMIRLDILD 420
Query: 179 LQHNEIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L N++ L M + L L +++N + + DF GL L ++++N ++T+
Sbjct: 421 LTGNQLAELKPLEMTLLPSLKILKVAYNNITKLE-QDFKGLPVLCQANLTNNQISTISSE 479
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI-KAINIQLA-LKTQCQIF 294
T +HN +L+ P++C D+ N + + + +Q A ++ + Q F
Sbjct: 480 LVT-----NTRCKNHNVPGKLEIHLDDNPIMC--DVGLNELCRLMAVQEARIRGRSQCF 531
Score = 119 (46.9 bits), Expect = 0.00074, P = 0.00074
Identities = 42/183 (22%), Positives = 86/183 (46%)
Query: 105 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK-RLRTVDLSYNKINKFGTRNE 163
N + S+ + L+ T + L ++H+QL + + + L + + +N +
Sbjct: 47 NAVVDSLANKLNADTNID-LKITHSQLDDLEMRSFTDMNFNLYKLRMQWNSLKSLP---- 101
Query: 164 GKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLK 222
+ +G++N+ L + N+++ + AL + L LD+ K+R + +DF G+ +
Sbjct: 102 -EVPFRGLSNVTYLSIGDNDLDEIPKHALSHMPSLLTLDIGRCKIRAVQQEDFRGIQRVT 160
Query: 223 MLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAIN 282
L + N++T L+ S F +L L + N L L+ H L L + NNI +++
Sbjct: 161 NLILVSNIITRLDRGS--FPKSLLILHLGRNQLESLNGSLHDLHNLESLFINANNITSLD 218
Query: 283 IQL 285
+L
Sbjct: 219 DEL 221
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 298 (110.0 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 90/280 (32%), Positives = 148/280 (52%)
Query: 8 LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 66
L L+ NRL ++ L+ LQ + + N+L A+PS + SL+ +N+I S+DG
Sbjct: 75 LNLSYNRLSEIDSAAFEDLTNLQEVYLNSNELTAIPSLGAASIGVVSLFLQHNKILSVDG 134
Query: 67 L-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK-LAY 123
L+ L+V ++ N IT +R F N + ++L +N+I+ + S + GL++ L
Sbjct: 135 SQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLT 194
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L LS N++T+ + + L RL +DL+ N+I EG QG+ ++ L+LQ N
Sbjct: 195 LRLSKNRITQLPVKAFK-LPRLTQLDLNRNRIRLI----EGLT-FQGLDSLEVLRLQRNN 248
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I L DGA G+ + L L +N L ++ GL +L L +S+N ++ ++ +F
Sbjct: 249 ISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFC 308
Query: 243 PALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L EL +S N+LTRLD++ L L L+HN I I
Sbjct: 309 QKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHI 348
Score = 259 (96.2 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 80/262 (30%), Positives = 137/262 (52%)
Query: 8 LFLNNNRLKSLE-GQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 65
L L +NR+ LE G LS+ L L + +N++ LP +L L N NRI ++
Sbjct: 170 LNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAFKLPRLTQLDLNRNRIRLIE 229
Query: 66 GL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 123
GL +GL L+V + N I+ + F L + + L+ N + +NS SL GLT L
Sbjct: 230 GLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQ 289
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L+LS+N ++ D ++L + LS+N + TR + ++ + ++++ L+L HN
Sbjct: 290 LHLSNNSISRIQRDGWSFCQKLHELILSFNNL----TRLDEESLAE-LSSLSILRLSHNA 344
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLR-TISPDD--FIGLDSLKMLDISHNLLTTLEETSK 239
I ++ +GA G+ L LDL HN++ TI F GLD+L L + N + ++ + +
Sbjct: 345 ISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAF 404
Query: 240 TFLPALEELFVSHNSLTRLDKD 261
+ L +LE L + N++ + D
Sbjct: 405 SGLESLEHLNLGENAIRSVQFD 426
Score = 247 (92.0 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 78/262 (29%), Positives = 129/262 (49%)
Query: 1 GLT-DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANN 58
GL+ L L L+ NR+ L + L +L L + +N++ + Q L L
Sbjct: 187 GLSRSLLTLRLSKNRITQLPVKAFKLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQR 246
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N I+ L DG GL+K+ V ++++N + V L L + L NN I+ + S
Sbjct: 247 NNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWS 306
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
KL L LS N LT + + L L + LS+N I+ EG +G+ ++
Sbjct: 307 FCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIA---EGA--FKGLKSLRV 361
Query: 177 LKLQHNEI----ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L L HNEI E+ GA G+ LS+L L NK+++++ F GL+SL+ L++ N +
Sbjct: 362 LDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIR 421
Query: 233 TLEETSKTFLPALEELFVSHNS 254
+++ + + L+EL++S S
Sbjct: 422 SVQFDAFAKMKNLKELYISSES 443
Score = 241 (89.9 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 92/336 (27%), Positives = 171/336 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNN 59
LT+L ++LN+N L ++ LG S + L ++ N++ ++ S ++ + L L ++N
Sbjct: 93 LTNLQEVYLNSNELTAIPS-LGAASIGVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSN 151
Query: 60 RITSLDGLL--RGLTKLQVFNMDFNQITMVRRDEFQNL-HNLDSISLQNNQITSMNSSLS 116
IT + GL +++ N+ N+I+++ F L +L ++ L N+IT +
Sbjct: 152 NITEIRSSCFPNGL-RIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAF 210
Query: 117 GLTKLAYLYLSHNQLTEFLLDDI--RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L +L L L+ N++ L++ + +GL L + L N I++ +G G++ +
Sbjct: 211 KLPRLTQLDLNRNRIR--LIEGLTFQGLDSLEVLRLQRNNISRL---TDGA--FWGLSKM 263
Query: 175 FELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
L L++N + ++ G+L G+ L +L LS+N + I D + L L +S N LT
Sbjct: 264 HVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTR 323
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
L+E S L +L L +SHN+++ + + F GL L DL HN I I+ T
Sbjct: 324 LDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISG-TIE---DTSGA 379
Query: 293 IFGLNSTLRIYLEGNPVLCDDSMRAV--IDAMETIN 326
GL++ ++ L GN + + RA ++++E +N
Sbjct: 380 FTGLDNLSKLTLFGNKIK-SVAKRAFSGLESLEHLN 414
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 291 (107.5 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 89/280 (31%), Positives = 145/280 (51%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 66
L L+ N+L ++ L LQ + + N+L A+PS S + SL+ +N+I S++G
Sbjct: 73 LNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVEG 132
Query: 67 L-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTK-LAY 123
L+ L+V ++ N IT VR F + + ++L N+I ++ + GL++ L
Sbjct: 133 SQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLT 192
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L LS N++T+ + + L RL +DL+ N+I EG QG+ ++ LKLQ N
Sbjct: 193 LRLSKNRITQLPVRAFK-LPRLTQLDLNRNRIRLI----EGLT-FQGLNSLEVLKLQRNN 246
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I L DGA G+ + L L +N L ++ GL +L L +S+N + + +F
Sbjct: 247 ISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFC 306
Query: 243 PALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L EL +S N+LTRLD++ L L L+HN+I I
Sbjct: 307 QKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHI 346
Score = 252 (93.8 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 80/262 (30%), Positives = 134/262 (51%)
Query: 8 LFLNNNRLKSLE-GQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 65
L L NR+ +LE G LS+ L L + +N++ LP +L L N NRI ++
Sbjct: 168 LNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAFKLPRLTQLDLNRNRIRLIE 227
Query: 66 GL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 123
GL +GL L+V + N I+ + F L + + L+ N + +NS SL GLT L
Sbjct: 228 GLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQ 287
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L+LS+N + ++L + LS+N + TR + ++ + ++++ L+L HN
Sbjct: 288 LHLSNNSIARIHRKGWSFCQKLHELVLSFNNL----TRLDEESLAE-LSSLSVLRLSHNS 342
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLR-TISPDD--FIGLDSLKMLDISHNLLTTLEETSK 239
I ++ +GA G+ L LDL HN++ TI F GLDSL L + N + ++ + +
Sbjct: 343 ISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAF 402
Query: 240 TFLPALEELFVSHNSLTRLDKD 261
+ L LE L + N++ + D
Sbjct: 403 SGLEGLEHLNLGGNAIRSVQFD 424
Score = 242 (90.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 77/262 (29%), Positives = 129/262 (49%)
Query: 1 GLT-DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANN 58
GL+ L L L+ NR+ L + L +L L + +N++ + Q + L L
Sbjct: 185 GLSRSLLTLRLSKNRITQLPVRAFKLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQR 244
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N I+ L DG GL+K+ V ++++N + V L L + L NN I ++ S
Sbjct: 245 NNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWS 304
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
KL L LS N LT + + L L + LS+N I+ EG +G+ ++
Sbjct: 305 FCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIA---EGA--FKGLRSLRV 359
Query: 177 LKLQHNEI----ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L L HNEI E+ GA G+ LS+L L NK+++++ F GL+ L+ L++ N +
Sbjct: 360 LDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIR 419
Query: 233 TLEETSKTFLPALEELFVSHNS 254
+++ + + L+EL +S +S
Sbjct: 420 SVQFDAFVKMKNLKELHISSDS 441
Score = 227 (85.0 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 87/316 (27%), Positives = 152/316 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNR 60
L +L ++LNNN L ++ S + L ++ N++ ++ S ++ + L L + N
Sbjct: 91 LPNLQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNN 150
Query: 61 ITSLDGLL--RGLTKLQVFNMDFNQITMVRRDEFQNL-HNLDSISLQNNQITSMNSSLSG 117
IT + G ++ N+ N+I + F L +L ++ L N+IT +
Sbjct: 151 ITEVRNTCFPHG-PPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAFK 209
Query: 118 LTKLAYLYLSHNQLTEFLLDDI--RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L +L L L+ N++ L++ + +GL L + L N I+K +G G++ +
Sbjct: 210 LPRLTQLDLNRNRIR--LIEGLTFQGLNSLEVLKLQRNNISKL---TDGA--FWGLSKMH 262
Query: 176 ELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L L++N + ++ G+L G+ L +L LS+N + I + L L +S N LT L
Sbjct: 263 VLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRL 322
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
+E S L +L L +SHNS++ + + F GL L DL HN I I+ T
Sbjct: 323 DEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISG-TIE---DTSGAF 378
Query: 294 FGLNSTLRIYLEGNPV 309
GL+S ++ L GN +
Sbjct: 379 SGLDSLSKLTLFGNKI 394
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 79/284 (27%), Positives = 131/284 (46%)
Query: 8 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD 65
LFL +N+++S+EG QL L++L + N + E + + L NRI +L+
Sbjct: 120 LFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLE 179
Query: 66 -GLLRGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLA 122
G GL++ L + N+IT + F+ L L + L N+I + + GL L
Sbjct: 180 LGAFDGLSRSLLTLRLSKNRITQLPVRAFK-LPRLTQLDLNRNRIRLIEGLTFQGLNSLE 238
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L N +++ GL ++ + L YN + + N G + G+T + +L L +N
Sbjct: 239 VLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEV---NSGS--LYGLTALHQLHLSNN 293
Query: 183 EIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
I + L L LS N L + + L SL +L +SHN ++ + E +
Sbjct: 294 SIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKG 353
Query: 242 LPALEELFVSHNSLTRLDKD----FHGLPVLCKADLAHNNIKAI 281
L +L L + HN ++ +D F GL L K L N IK++
Sbjct: 354 LRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSV 397
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 278 (102.9 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 89/321 (27%), Positives = 156/321 (48%)
Query: 7 WLFLNNNRLKSL-EGQLGTLSKLQLLVIEQ-NQLEALPSDIQLFSQLGSLYANNNRITSL 64
+L+L N + + E +L L L L ++ N L P L L+ NNN I L
Sbjct: 64 FLYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRL 123
Query: 65 D-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLA 122
D G+ +GL L+ + +NQ++ V R F +L ++ ++LQ N++T + S + G+ L
Sbjct: 124 DPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALR 183
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L LS+N + + L+ L + L N + K + N + + ++ L L HN
Sbjct: 184 ILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPS-----NAFEVLKSLRRLSLSHN 238
Query: 183 EIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
IE + A G+ L L L ++++R ++ D F G+++LK L +SHN L L + +
Sbjct: 239 PIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSL 298
Query: 242 LPALEELFVSHNSLTRLDKD-FHGLPVLCKA-DLAHNNIKAINIQLALKTQCQIFGLNST 299
L L L + N + +D D F + K +L+ NN+ A++ ++ LK L+S
Sbjct: 299 LKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLTALHPRV-LKP------LSSL 351
Query: 300 LRIYLEGNPVLCDDSMRAVID 320
+ + NP C+ + + D
Sbjct: 352 IHLQANSNPWECNCKLLGLRD 372
Score = 252 (93.8 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 83/260 (31%), Positives = 130/260 (50%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL-YAN-- 57
L L +LFLNNN +K L+ G L L+ L ++ NQ+ +P + F+ L S+ Y N
Sbjct: 107 LRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGV--FNDLVSVQYLNLQ 164
Query: 58 NNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
NR+T L G G+ L++ ++ N I + FQ+L NL + L +N +T + S+
Sbjct: 165 RNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAF 224
Query: 117 GLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+ K L L LSHN + +GL L + L ++I RN ++ G+ N+
Sbjct: 225 EVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRI-----RNVTRDGFSGINNLK 279
Query: 176 ELKLQHNEIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLD-SLKMLDISHNLLTT 233
L L HN++ENL+ + L L L N++ +I D F + SLK+L++S N LT
Sbjct: 280 HLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLTA 339
Query: 234 LEETSKTFLPALEELFVSHN 253
L L +L L + N
Sbjct: 340 LHPRVLKPLSSLIHLQANSN 359
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 1 GLTDLNWLFLNNNRLKSL--EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYAN 57
GL +L +L L N+R++++ +G G ++ L+ L++ N LE L SD L L L +
Sbjct: 250 GLANLEYLLLKNSRIRNVTRDGFSG-INNLKHLILSHNDLENLNSDTFSLLKNLIYLKLD 308
Query: 58 NNRITSLDG-LLRGL-TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ-NNQITSMNSS 114
NRI S+D + L++ N+ FN +T + + L +L I LQ N+ N
Sbjct: 309 RNRIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLSSL--IHLQANSNPWECNCK 366
Query: 115 LSGL 118
L GL
Sbjct: 367 LLGL 370
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 277 (102.6 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 101/359 (28%), Positives = 172/359 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL +L L L+ N L+S++ + L +LQ L +++N + A+ P L L ++
Sbjct: 216 GLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSH 275
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
NR+ L + GL L V + N I +R F++LH L+ + L +N+I + +
Sbjct: 276 NRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFE 335
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL +L L L+ NQ+TE + GL + ++LS N + R QG+ +
Sbjct: 336 GLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPER-----VFQGLDKLHS 390
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+H+ + ++ G+ GL RL L N + +I GL L LD++ N LT L
Sbjct: 391 LHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLP 450
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHG-LPVLCKADLAHNNIKAI---------NIQ- 284
L LE L +S+N LT L + G L D++HN+++ + ++
Sbjct: 451 RQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRY 510
Query: 285 LALKTQC-QIFGLNSTL-RIYLEGNPVLCDDSMRAVID-AMETINNNTKIHGETICQPD 340
L+L+ Q F L R++L+ NP C ++A+ D A++ + +T+C+ D
Sbjct: 511 LSLRNNSLQTFSPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFV-QTVCEGD 568
Score = 238 (88.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 88/289 (30%), Positives = 142/289 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYA 56
L+ L++L L + L+SLE Q LG L L L +E+N+L L + LF+ L SL
Sbjct: 97 LSSLDFLNLQGSWLRSLEPQALLG-LQNLYYLHLERNRLRNLA--VGLFTHTPSLASLSL 153
Query: 57 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
++N + L+ GL +GL+ L N+ +N + ++ FQ L NL + L N++T + +L
Sbjct: 154 SSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPAL 213
Query: 116 -SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
GL +L L LS N L + L RL+ + L N I G+ +
Sbjct: 214 FCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAP-----GAFLGMKAL 268
Query: 175 FELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
L L HN + L + G+ GL L L+HN + ++ P F L L+ L + HN +
Sbjct: 269 RWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQ 328
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L E + L LE L ++ N +T + F GL + +L+ N ++++
Sbjct: 329 LGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSL 377
Score = 237 (88.5 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 91/341 (26%), Positives = 156/341 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL +L +L L NRL++L L T + L L + N L L + Q S L L
Sbjct: 120 GLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGW 179
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS- 116
N + L D + +GL L + N++T ++ F L L + L N + S+ +++
Sbjct: 180 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFV 239
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L +L LYL N +T G+K LR +DLS+N++ G + G+ +
Sbjct: 240 HLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVA--GLMED---TFPGLLGLHV 294
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L+L HN I +L +H L L L HN++R + F GL L++L ++ N +T +
Sbjct: 295 LRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVR 354
Query: 236 ETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
+ + L + + +S N L L ++ F GL L L H+ + + +
Sbjct: 355 VGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHT-------FA 407
Query: 295 GLNSTLRIYLEGNPV--LCDDSMRAVIDAMET-INNNTKIH 332
GL+ R++L N + + + S+ + + +E + N H
Sbjct: 408 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTH 448
Score = 232 (86.7 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 83/282 (29%), Positives = 132/282 (46%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD 65
L+L+ N L S+ LS L L ++ + L +L P + L L+ NR+ +L
Sbjct: 79 LWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLA 138
Query: 66 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAY 123
GL L ++ N + + FQ L +L ++L N + + ++ GL L
Sbjct: 139 VGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHE 198
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N+LT GL LR +DLS N + R+ N + + +L L N
Sbjct: 199 LVLAGNKLTYLQPALFCGLGELRELDLSRNAL-----RSVKANVFVHLPRLQKLYLDRNL 253
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I + GA +G+ L LDLSHN++ + D F GL L +L ++HN + +L + L
Sbjct: 254 ITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDL 313
Query: 243 PALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINI 283
LEEL + HN + +L ++ F GL L L N I + +
Sbjct: 314 HFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRV 355
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 276 (102.2 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 97/332 (29%), Positives = 164/332 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
L L L+LNNN++ ++ + +G + L+ L + N+L +L D L L L +
Sbjct: 236 LQKLQKLYLNNNQINAIAPRAFMG-MKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLST 294
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
N ITSL + L L+ + N+I + F L L+ +SL NNQ+ + + +
Sbjct: 295 NSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFL 354
Query: 117 GLTKLAYLYLSHN---QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
GL +A ++LS N L E++ + G+ +L ++ L ++ ++K N +T+
Sbjct: 355 GLYNVAVMHLSANCIKTLPEYVFE---GVTKLHSLHLEHSCLSKIRA-----NTFSSLTS 406
Query: 174 IFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
+ L LQHN I + D + +H L LDL HN+L +SP F+GL +L+ L +S N +
Sbjct: 407 LRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIM 466
Query: 233 TLEETSKTFLPALEELF---VSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALK 288
+ + TF P L LF +SHN L LD L L L +N+++ ++
Sbjct: 467 DISQN--TFSP-LRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNSLETFSVGFL-- 521
Query: 289 TQCQIFGLNSTLRIYLEGNPVLCDDSMRAVID 320
C F L +++L GN C+ S++ + D
Sbjct: 522 --CPSFTLE---QLWLGGNNWHCNCSLKGLRD 548
Score = 272 (100.8 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 86/268 (32%), Positives = 137/268 (51%)
Query: 1 GLTDLNWLFLNNNRLKSL--EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYAN 57
G+ L WL L++NRL SL + LG LS L +L + N + +L P + L L
Sbjct: 259 GMKSLRWLDLSHNRLTSLYEDTFLGLLS-LHVLRLSTNSITSLRPRTFKDLQFLEELQLG 317
Query: 58 NNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL- 115
+NRI SL + GL +L+V +++ NQ+ ++ F L+N+ + L N I ++ +
Sbjct: 318 HNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVF 377
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
G+TKL L+L H+ L++ + L LR + L +N I+ ++ + + +
Sbjct: 378 EGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQS-----FRELHELL 432
Query: 176 ELKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
EL L+HN + +L L +G+ L L LS N++ IS + F L L LD+SHN L TL
Sbjct: 433 ELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATL 492
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKDF 262
+ T L L L + +NSL F
Sbjct: 493 DNAVITQLANLRYLSLRNNSLETFSVGF 520
Score = 199 (75.1 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 86/344 (25%), Positives = 152/344 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL-YAN 57
GL L L L NRLK L L T L L + N + LF+ L +L Y N
Sbjct: 115 GLRSLYHLHLERNRLKYLAPHTFLHT-QNLVSLSLNNNLFSKVEEG--LFAGLSNLWYLN 171
Query: 58 ---NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 114
N+ + D + L L+ + N++ ++ F +L L + L N + + +
Sbjct: 172 LGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKIN 231
Query: 115 LS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
+ L KL LYL++NQ+ G+K LR +DLS+N++ ++ G+ +
Sbjct: 232 IFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLY-----EDTFLGLLS 286
Query: 174 IFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
+ L+L N I +L + L L L HN++ +++ F GL L++L +++N L
Sbjct: 287 LHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQ 346
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQC 291
++ + L + + +S N + L + F G+ L L H+ + I
Sbjct: 347 DIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANT------ 400
Query: 292 QIFGLNSTLRIYLEGNPV--LCDDSMRAVIDAMET-INNNTKIH 332
L S R++L+ N + + D S R + + +E + +N H
Sbjct: 401 -FSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSH 443
Score = 197 (74.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 82/287 (28%), Positives = 131/287 (45%)
Query: 3 TDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---ANN 58
T+ ++L+ N L LS L L ++ +QL A+ F L SLY
Sbjct: 69 TNAKAIWLDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQ--HAFHGLRSLYHLHLER 126
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
NR+ L L +++ N + V F L NL ++L N + + +
Sbjct: 127 NRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFH 186
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L L+ N+L L L+ +DLS N + G + ++Q + ++
Sbjct: 187 DLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALK--GIKINIFVKLQKLQKLY- 243
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L +N+I + A MG+ L LDLSHN+L ++ D F+GL SL +L +S N +T+L
Sbjct: 244 --LNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLR 301
Query: 236 ETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAI 281
+ L LEEL + HN + L ++ F GL L L +N ++ I
Sbjct: 302 PRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDI 348
Score = 127 (49.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 45/174 (25%), Positives = 76/174 (43%)
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T ++L N T+ R L L +DL +++ ++ G+ +++ L
Sbjct: 69 TNAKAIWLDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVE-----QHAFHGLRSLYHLH 123
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L+ N ++ L + L L L++N + F GL +L L++ N L L +
Sbjct: 124 LERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDK 183
Query: 238 SKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQ 290
LP L EL ++ N L L F L L + DL+ N +K I I + +K Q
Sbjct: 184 VFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQ 237
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 275 (101.9 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 101/359 (28%), Positives = 172/359 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL +L L L+ N L+S++ + L +LQ L +++N + A+ P L L ++
Sbjct: 215 GLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSH 274
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
NR+ L + GL L V + N I +R F++LH L+ + L +N+I + +
Sbjct: 275 NRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFE 334
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL +L L L+ NQ+TE + GL + ++LS N + R QG+ +
Sbjct: 335 GLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPER-----VFQGLDKLHS 389
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+H+ + ++ G+ GL RL L N + +I GL L LD++ N LT L
Sbjct: 390 LHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLP 449
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHG-LPVLCKADLAHNNIKAI---------NIQ- 284
L LE L +S+N LT L + G L D++HN+++ + ++
Sbjct: 450 RQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRY 509
Query: 285 LALKTQC-QIFGLNSTL-RIYLEGNPVLCDDSMRAVID-AMETINNNTKIHGETICQPD 340
L+L+ Q F L R++L+ NP C ++A+ D A++ + +T+C+ D
Sbjct: 510 LSLRNNSLQTFSPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFV-QTVCEGD 567
Score = 241 (89.9 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 89/289 (30%), Positives = 143/289 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYA 56
L+ L++L L + L+SLE Q LG L L L +E+N+L L + LF+ L SL
Sbjct: 96 LSSLDFLNLQGSWLRSLEPQALLG-LQNLYHLHLERNRLRNLA--VGLFTHTPSLASLSL 152
Query: 57 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
++N + L+ GL +GL+ L N+ +N + ++ FQ L NL + L N++T + +L
Sbjct: 153 SSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPAL 212
Query: 116 -SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
GL +L L LS N L + L RL+ + L N I R G+ +
Sbjct: 213 FCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPR-----AFLGMKAL 267
Query: 175 FELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
L L HN + L + G+ GL L L+HN + ++ P F L L+ L + HN +
Sbjct: 268 RWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQ 327
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L E + L LE L ++ N +T + F GL + +L+ N ++++
Sbjct: 328 LGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSL 376
Score = 232 (86.7 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 91/341 (26%), Positives = 155/341 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL +L L L NRL++L L T + L L + N L L + Q S L L
Sbjct: 119 GLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGW 178
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS- 116
N + L D + +GL L + N++T ++ F L L + L N + S+ +++
Sbjct: 179 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFV 238
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L +L LYL N +T G+K LR +DLS+N++ G + G+ +
Sbjct: 239 HLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVA--GLMED---TFPGLLGLHV 293
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L+L HN I +L +H L L L HN++R + F GL L++L ++ N +T +
Sbjct: 294 LRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVR 353
Query: 236 ETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
+ + L + + +S N L L ++ F GL L L H+ + + +
Sbjct: 354 VGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHT-------FA 406
Query: 295 GLNSTLRIYLEGNPV--LCDDSMRAVIDAMET-INNNTKIH 332
GL+ R++L N + + + S+ + + +E + N H
Sbjct: 407 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTH 447
Score = 225 (84.3 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 82/282 (29%), Positives = 131/282 (46%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD 65
L+L+ N L S+ LS L L ++ + L +L P + L L+ NR+ +L
Sbjct: 78 LWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLA 137
Query: 66 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAY 123
GL L ++ N + + FQ L +L ++L N + + ++ GL L
Sbjct: 138 VGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHE 197
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N+LT GL LR +DLS N + R+ N + + +L L N
Sbjct: 198 LVLAGNKLTYLQPALFCGLGELRELDLSRNAL-----RSVKANVFVHLPRLQKLYLDRNL 252
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I + A +G+ L LDLSHN++ + D F GL L +L ++HN + +L + L
Sbjct: 253 ITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDL 312
Query: 243 PALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINI 283
LEEL + HN + +L ++ F GL L L N I + +
Sbjct: 313 HFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRV 354
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 275 (101.9 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 106/361 (29%), Positives = 169/361 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL +L L L+ N L++++ + L +LQ L +++N + A+ P L L ++
Sbjct: 216 GLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSH 275
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 116
NR+ L + GL L+V + N I +R F++LH L+ + L +N+I + S
Sbjct: 276 NRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFE 335
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL +L L L HNQL E GL + ++LS N + RN + +G+ +
Sbjct: 336 GLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCL-----RNLPEQVFRGLGKLHS 390
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+ + + + G+ GL RL L N L I GL L LD++ N LT L
Sbjct: 391 LHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLP 450
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHG-LPVLCKADLAHNNIKAI-NIQLALKTQCQI 293
L LE L +S N L L D G L D++HN ++A+ N LA + +
Sbjct: 451 HRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRY 510
Query: 294 FGL-NSTLR-----------IYLEGNPVLCDDSMRAVIDAMETINNNTKIHG--ETICQP 339
L N++LR ++LEGNP C ++A+ D + N + + + IC+
Sbjct: 511 LSLRNNSLRTFTPQPPGLERLWLEGNPWDCGCPLKALRDF--ALQNPSAVPRFVQAICEG 568
Query: 340 D 340
D
Sbjct: 569 D 569
Score = 253 (94.1 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 99/314 (31%), Positives = 148/314 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANN 58
L+ L +L L +L SLE Q LG L L L +E+NQL +L + L SL +N
Sbjct: 97 LSSLGFLNLQGGQLGSLEPQALLG-LENLCHLHLERNQLRSLALGTFAHTPALASLGLSN 155
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
NR++ L DGL GL L N+ +N + ++ F+ L +L + L N++ + +L S
Sbjct: 156 NRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFS 215
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL +L L LS N L + L RL+ + L N I G+ +
Sbjct: 216 GLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAP-----GAFLGLKALRW 270
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L HN + L + G+ GL L LSHN + ++ P F L L+ L + HN + L
Sbjct: 271 LDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLA 330
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
E S L LE L + HN L + F GL + +L+ N ++ N+ Q+F
Sbjct: 331 ERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLR--NLPE------QVF 382
Query: 295 -GLNSTLRIYLEGN 307
GL ++LEG+
Sbjct: 383 RGLGKLHSLHLEGS 396
Score = 239 (89.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 70/233 (30%), Positives = 118/233 (50%)
Query: 53 SLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 111
S++ ++ +T L DG+ G Q +D N ++ V FQNL +L ++LQ Q+ S+
Sbjct: 57 SVFCSSRNLTRLPDGVPGGT---QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSL 113
Query: 112 N-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG 170
+L GL L +L+L NQL L L ++ LS N++++ +G +G
Sbjct: 114 EPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRL---EDGL--FEG 168
Query: 171 VTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
+ ++++L L N + L D A G+ L L L+ N+L + P F GL L+ LD+S N
Sbjct: 169 LGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRN 228
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L ++ LP L++L++ N + + F GL L DL+HN + +
Sbjct: 229 ALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGL 281
Score = 234 (87.4 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 81/280 (28%), Positives = 132/280 (47%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD 65
L+L+ N L S+ LS L L ++ QL +L P + L L+ N++ SL
Sbjct: 79 LWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLA 138
Query: 66 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAY 123
G L + N+++ + F+ L +L ++L N + + +++ GL L
Sbjct: 139 LGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRE 198
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N+L GL LR +DLS N + N + + +L L N
Sbjct: 199 LVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKA-----NVFVQLPRLQKLYLDRNL 253
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I + GA +G+ L LDLSHN++ + D F GL L++L +SHN + +L + L
Sbjct: 254 IAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDL 313
Query: 243 PALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAI 281
LEEL + HN + +L ++ F GL L L HN ++ +
Sbjct: 314 HFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEV 353
Score = 232 (86.7 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 83/275 (30%), Positives = 130/275 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSK---LQLLVIEQNQLEALPSDIQLFSQLGSLYAN 57
GL +L L L N+L+SL LGT + L L + N+L L LF LGSL+
Sbjct: 120 GLENLCHLHLERNQLRSLA--LGTFAHTPALASLGLSNNRLSRLEDG--LFEGLGSLWDL 175
Query: 58 N---NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 113
N N + L D RGL L+ + N++ ++ F L L + L N + ++ +
Sbjct: 176 NLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKA 235
Query: 114 SLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVT 172
++ L +L LYL N + GLK LR +DLS+N++ G + G+
Sbjct: 236 NVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVA--GLLED---TFPGLL 290
Query: 173 NIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ L+L HN I +L +H L L L HN++R ++ F GL L++L + HN L
Sbjct: 291 GLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQL 350
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGL 265
++ + L + + +S N L L + F GL
Sbjct: 351 QEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGL 385
Score = 138 (53.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 62/243 (25%), Positives = 112/243 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GLT++ + L+ N L++L Q+ L KL L +E + L + P S L L+ +
Sbjct: 360 GLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKD 419
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
N + ++ L GL +L ++ NQ+T + FQ L L+ + L N++ + + G
Sbjct: 420 NGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALG 479
Query: 118 -LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L + +L +SHN+L + L RLR + L N + F + G ++ N ++
Sbjct: 480 PLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQPPGLERLWLEGNPWD 539
Query: 177 ----LK-LQHNEIENLDGALMGIHGLSRLD------LSHNKLRTISPDDFIGLDSLKMLD 225
LK L+ ++N + + D ++N + SP + +GLD L+ L
Sbjct: 540 CGCPLKALRDFALQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASPPEVVGLD-LRDLS 598
Query: 226 ISH 228
+H
Sbjct: 599 EAH 601
>ZFIN|ZDB-GENE-030131-6062 [details] [associations]
symbol:lrrc40 "leucine rich repeat containing 40"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030131-6062 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AY394934
EMBL:BC055223 IPI:IPI00499633 RefSeq:NP_956156.2 UniGene:Dr.80656
ProteinModelPortal:Q7SXW3 GeneID:334130 KEGG:dre:334130 CTD:55631
HOGENOM:HOG000005761 HOVERGEN:HBG081930 InParanoid:Q7SXW3
OrthoDB:EOG4M65HK NextBio:20810275 ArrayExpress:Q7SXW3
InterPro:IPR015766 PANTHER:PTHR23155:SF28 Uniprot:Q7SXW3
Length = 601
Score = 274 (101.5 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 89/287 (31%), Positives = 142/287 (49%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
TDL L L++N+L+S+ + L L +L I NQL +LP I QL L ++N++T
Sbjct: 80 TDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLT 139
Query: 63 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L G+ R LT L+ ++ N I + RD Q L NLD + L NN + + SL+ L L
Sbjct: 140 ELPSGVWR-LTNLRCLHLQQNLIEQIPRDLGQ-LVNLDELDLSNNHLIDIPESLANLQNL 197
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N+L L I +K LR +D S N++ + + ++ +L L+H
Sbjct: 198 VKLDLSCNKLKS-LPPAISQMKNLRMLDCSRNQMESIPP------VLAQMESLEQLYLRH 250
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N++ L L L L +N++ + + L++L +L++ N + +L E T
Sbjct: 251 NKLRYLP-ELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEI-TL 308
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALK 288
L LE L +++N ++ L LP L L N ++AI L K
Sbjct: 309 LQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTK 355
Score = 191 (72.3 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 60/233 (25%), Positives = 112/233 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L L++N+L L + L+ L+ L ++QN +E +P D+ L L +NN +
Sbjct: 125 LEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHL 184
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ L L L ++ N++ + + NL + NQ+ S+ L+ + L
Sbjct: 185 IDIPESLANLQNLVKLDLSCNKLKSLP-PAISQMKNLRMLDCSRNQMESIPPVLAQMESL 243
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
LYL HN+L L ++ K L+ + N+I E ++ ++ + + L+L+
Sbjct: 244 EQLYLRHNKLR--YLPELPCCKTLKELHCGNNQIEVL----EAEH-LKHLNALSLLELRD 296
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
N++++L + + GL RLDL++N + ++ P L LK L + N L +
Sbjct: 297 NKVKSLPEEITLLQGLERLDLTNNDISSL-PCGLGTLPKLKSLSLEGNPLRAI 348
Score = 185 (70.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 79/316 (25%), Positives = 146/316 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L+ N+LKSL + + L++L +NQ+E++P + L LY +N++
Sbjct: 194 LQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKL 253
Query: 62 TSLDGL--LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
L L + L +L N NQI ++ + ++L+ L + L++N++ S+ ++ L
Sbjct: 254 RYLPELPCCKTLKELHCGN---NQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQ 310
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG----TRNEG------KNQVQ 169
L L L++N ++ L + L +L+++ L N + T+ G +++VQ
Sbjct: 311 GLERLDLTNNDISS-LPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQ 369
Query: 170 GVTNIFELKLQHNEIENLDG-ALMGIHG---LSRLDLSHNKLRTISPDDFIGLDSLKMLD 225
N LK + A + +H L LD S + TI D F +D + +
Sbjct: 370 EPPN-GGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVAN 428
Query: 226 I--SHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI 283
+ S N LT + +L ++ + N LT + DF L L DL +N + ++ +
Sbjct: 429 VNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPM 488
Query: 284 QLA--LKTQCQIFGLN 297
+L +K + I N
Sbjct: 489 ELEGLIKLRSVILSFN 504
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 84/322 (26%), Positives = 146/322 (45%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
L L NN+++ LE + L L+ L LL + N++++LP +I L L L NN I+S
Sbjct: 265 LKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISS 324
Query: 64 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 123
L L L KL+ +++ N + +RRD L++ N L K A
Sbjct: 325 LPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAM 384
Query: 124 LYLSHNQLTEFLLDDIRGL----KRLRTV-DLSYNKI--NKFGTRNEGKNQVQGVTN-IF 175
+ S ++ + ++ L K+ T+ D ++ + N N KNQ+ V + I
Sbjct: 385 TFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIV 444
Query: 176 ELK-------LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
+LK L N++ + + L +DL +N L ++ P + GL L+ + +S
Sbjct: 445 DLKDSLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISL-PMELEGLIKLRSVILSF 503
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHNNIKAINIQLAL 287
N + E +P+LE + +S N + +D L L DL++N+I + +L
Sbjct: 504 NRFKSFPEVLYR-IPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELG- 561
Query: 288 KTQCQIFGLNSTLR-IYLEGNP 308
C ++LR + L+GNP
Sbjct: 562 --NC------TSLRALMLDGNP 575
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 66/243 (27%), Positives = 111/243 (45%)
Query: 69 RGLTKLQV----FNMDFNQ-----ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
RGLT++ N+D Q ++ D + +L + L +N++ S+ + L
Sbjct: 44 RGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLSSNKLQSIPDDVKLLP 103
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L + NQL+ L D I L++L+ + LS+NK+ + + G V +TN+ L L
Sbjct: 104 ALVVLDIHDNQLSS-LPDSIGDLEQLQKLILSHNKLTELPS---G---VWRLTNLRCLHL 156
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
Q N IE + L + L LDLS+N L I P+ L +L LD+S N L +L
Sbjct: 157 QQNLIEQIPRDLGQLVNLDELDLSNNHLIDI-PESLANLQNLVKLDLSCNKLKSLPPAIS 215
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNST 299
+ L L S N + + + L + L HN ++ + KT ++ N+
Sbjct: 216 Q-MKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQ 274
Query: 300 LRI 302
+ +
Sbjct: 275 IEV 277
Score = 127 (49.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL--YANNN 59
L L L L NN + SL LGTL KL+ L +E N L A+ D+ L G L Y +
Sbjct: 309 LQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDL-LTKGTGELLKYLRSR 367
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGL 118
+G GL + M F + + L LD Q+ I + ++ G
Sbjct: 368 VQEPPNG---GLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDG- 423
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLK-RLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+A + S NQLT + I LK L ++L +NK+ + + +
Sbjct: 424 NPVANVNFSKNQLTA-VPHRIVDLKDSLADINLGFNKLTTIPA------DFCHLKQLMHI 476
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L++N + +L L G+ L + LS N+ ++ P+ + SL+ + IS N + ++
Sbjct: 477 DLRNNLLISLPMELEGLIKLRSVILSFNRFKSF-PEVLYRIPSLETILISSNQVGGIDAV 535
Query: 238 SKTFLPALEELFVSHNSLTRL 258
L L L +S+N + ++
Sbjct: 536 QMKTLSRLSTLDLSNNDIMQV 556
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 50/190 (26%), Positives = 87/190 (45%)
Query: 25 LSKLQLLVIEQNQLEALPSDIQLFSQL-GSLYAN----NNRITSLDGLLRGLT-KLQVFN 78
+ L+ L + Q +P D+ F + G+ AN N++T++ + L L N
Sbjct: 397 IKTLKTLDYSEKQDATIPDDV--FDAVDGNPVANVNFSKNQLTAVPHRIVDLKDSLADIN 454
Query: 79 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 138
+ FN++T + D F +L L I L+NN + S+ L GL KL + LS N+ F +
Sbjct: 455 LGFNKLTTIPAD-FCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFP-EV 512
Query: 139 IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLS 198
+ + L T+ +S N++ Q++ ++ + L L +N+I + L L
Sbjct: 513 LYRIPSLETILISSNQVGGIDAV-----QMKTLSRLSTLDLSNNDIMQVPPELGNCTSLR 567
Query: 199 RLDLSHNKLR 208
L L N R
Sbjct: 568 ALMLDGNPFR 577
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 271 (100.5 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 83/292 (28%), Positives = 146/292 (50%)
Query: 5 LNWLFLNNNRLKSLE-GQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
L +L+LN+NR+ S+E G L+ L +L + +N++ A+P + QL L N N+I
Sbjct: 169 LKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIK 228
Query: 63 SLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTK 120
++DGL +GL L+ M N +T + F L N++ + L +N +T + L GL
Sbjct: 229 NVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLM 288
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L+LS N + D ++L +DL++N +++ + G++ + L +
Sbjct: 289 LQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDD-----SSFLGLSLLNTLHIG 343
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLR-TISPDD--FIGLDSLKMLDISHNLLTTLEE 236
+N + + D A G+ L LDL +N++ TI + F GLD L+ L + N + ++ +
Sbjct: 344 NNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITK 403
Query: 237 TSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALK 288
+ T L ALE L +S N++ L + + K H N ++ LK
Sbjct: 404 KAFTGLDALEHLDLSDNAIMSLQGN--AFSQMKKLQQLHLNTSSLLCDCQLK 453
Score = 260 (96.6 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 90/314 (28%), Positives = 157/314 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNN 59
L L + LNNN L+++ LG +S + LL + N++ E LP ++ F L +L ++N
Sbjct: 97 LQSLREVKLNNNELETIPN-LGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSN 155
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN-LDSISLQNNQITSMNSSLSGL 118
I+ L L +L+ ++ N++T + F NL N L + L N+I+++ + L
Sbjct: 156 NISELQTAFPAL-QLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFKL 214
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+L +L L+ N++ +GL L+++ + N + K +G G++N+ L+
Sbjct: 215 PQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKL---MDGA--FWGLSNMEILQ 269
Query: 179 LQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L HN + + G L G+ L L LS N + ISPD + L LD++ N L+ L+++
Sbjct: 270 LDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDS 329
Query: 238 SKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF-G 295
S L L L + +N ++ + D F GL L DL +N I ++ F G
Sbjct: 330 SFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEIS-----WTIEDMNGAFSG 384
Query: 296 LNSTLRIYLEGNPV 309
L+ R+ L+GN +
Sbjct: 385 LDKLRRLILQGNRI 398
Score = 256 (95.2 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 88/316 (27%), Positives = 158/316 (50%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSL-D 65
L LN NR+ ++ ++ L +LQ L + +N+++ + Q L SL N +T L D
Sbjct: 197 LKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMD 256
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYL 124
G GL+ +++ +D N +T + + L L + L N I ++ + KL+ L
Sbjct: 257 GAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSEL 316
Query: 125 YLSHNQLTEFLLDD--IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L+ N L+ LDD GL L T+ + N+++ +G++++ L L++N
Sbjct: 317 DLTFNHLSR--LDDSSFLGLSLLNTLHIGNNRVSYIADC-----AFRGLSSLKTLDLKNN 369
Query: 183 EI----ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
EI E+++GA G+ L RL L N++R+I+ F GLD+L+ LD+S N + +L+ +
Sbjct: 370 EISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNA 429
Query: 239 KTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKA-INIQLALKTQCQIFGLN 297
+ + L++L ++ +SL D LP +A NN ++ +N A Q+
Sbjct: 430 FSQMKKLQQLHLNTSSLL-CDCQLKWLPQW----VAENNFQSFVNASCA---HPQLLKGR 481
Query: 298 STLRIYLEGNPVLCDD 313
S + +G +CDD
Sbjct: 482 SIFAVSPDG--FVCDD 495
Score = 223 (83.6 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 84/308 (27%), Positives = 144/308 (46%)
Query: 8 LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS-LD 65
L L++NRL ++ + L L+ + + N+LE +P+ + + + L NRI L
Sbjct: 79 LDLSHNRLSFIKASSMSHLQSLREVKLNNNELETIPNLGPVSANITLLSLAGNRIVEILP 138
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTK-LAY 123
L+ L+ ++ N I+ ++ F L L + L +N++TSM L L
Sbjct: 139 EHLKEFQSLETLDLSSNNISELQT-AFPALQ-LKYLYLNSNRVTSMEPGYFDNLANTLLV 196
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N+++ + + L +L+ ++L+ NKI +N QG+ + LK+Q N
Sbjct: 197 LKLNRNRISA-IPPKMFKLPQLQHLELNRNKI-----KNVDGLTFQGLGALKSLKMQRNG 250
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+ L DGA G+ + L L HN L I+ GL L+ L +S N + + + F
Sbjct: 251 VTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFC 310
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLR 301
L EL ++ N L+RLD F GL +L + +N + I C GL+S
Sbjct: 311 QKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYI-------ADCAFRGLSSLKT 363
Query: 302 IYLEGNPV 309
+ L+ N +
Sbjct: 364 LDLKNNEI 371
Score = 201 (75.8 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 65/236 (27%), Positives = 118/236 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNN 59
L L L LN N++K+++G L L+ L +++N + L S + L ++N
Sbjct: 214 LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHN 273
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
+T + G L GL LQ ++ N I + D ++ L + L N ++ ++ SS G
Sbjct: 274 NLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLG 333
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L+ L L++ +N+++ ++ D RGL L+T+DL N+I+ T + G+ +
Sbjct: 334 LSLLNTLHIGNNRVS-YIADCAFRGLSSLKTLDLKNNEIS--WTIEDMNGAFSGLDKLRR 390
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
L LQ N I ++ A G+ L LDLS N + ++ + F + L+ L ++ + L
Sbjct: 391 LILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSL 446
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 70/308 (22%), Positives = 144/308 (46%)
Query: 31 LVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 89
L + N+L + S + L + NNN + ++ L + + ++ N+I +
Sbjct: 79 LDLSHNRLSFIKASSMSHLQSLREVKLNNNELETIPNLGPVSANITLLSLAGNRIVEILP 138
Query: 90 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR-LRTV 148
+ + +L+++ L +N I+ + ++ L +L YLYL+ N++T L L +
Sbjct: 139 EHLKEFQSLETLDLSSNNISELQTAFPAL-QLKYLYLNSNRVTSMEPGYFDNLANTLLVL 197
Query: 149 DLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKL 207
L+ N+I+ + Q+Q L+L N+I+N+DG G+ L L + N +
Sbjct: 198 KLNRNRISAIPPKMFKLPQLQ------HLELNRNKIKNVDGLTFQGLGALKSLKMQRNGV 251
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLP 266
+ F GL ++++L + HN LT + + L L+EL +S N++ R+ D +
Sbjct: 252 TKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQ 311
Query: 267 VLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV--LCDDSMRAVIDAMET 324
L + DL N++ ++ GL+ +++ N V + D + R + +++T
Sbjct: 312 KLSELDLTFNHLSRLD-------DSSFLGLSLLNTLHIGNNRVSYIADCAFRG-LSSLKT 363
Query: 325 IN-NNTKI 331
++ N +I
Sbjct: 364 LDLKNNEI 371
>UNIPROTKB|F1P0K8 [details] [associations]
symbol:Gga.13956 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007165 "signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 InterPro:IPR003591 SMART:SM00369
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104287
EMBL:AADN02000699 IPI:IPI00585441 ProteinModelPortal:F1P0K8
Ensembl:ENSGALT00000015265 OMA:CYLESAD Uniprot:F1P0K8
Length = 713
Score = 270 (100.1 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 86/289 (29%), Positives = 141/289 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT+L L L NRL L ++ L KL++L + N+L LP ++ + L+ N+N I
Sbjct: 44 LTNLEILILERNRLTQLPPEISLLHKLKVLNVSHNRLSCLPEELPKLVNIKELFLNHNNI 103
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L+ L L++ N++ + D ++ NL +++ +NQI+ L L L
Sbjct: 104 DEFPFALKSLETLELAG---NKLKTLS-DTMVDMKNLKVLNIDSNQISIFPRVLCYLPNL 159
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L N + + L DI+GLK+L+ +S+NK+ Q+ +T + L+
Sbjct: 160 VSLSLCENFI-QSLPKDIKGLKKLQEFSVSHNKLMFLSV------QLFQLTKLKRLRADD 212
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N++E L + + L+ L+LS N +TI+ D+ LK L + N LT L
Sbjct: 213 NKLEFLSDKVENLRELTFLNLSKNLFKTIT-DNLCNCTMLKHLILCDNQLTQLPANIDR- 270
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
L L+EL +S N L LD+ L L K +L+ N + I ++L TQ
Sbjct: 271 LKHLKELSLSGNQLNSLDEQISHLKDLSKIELSGNVLTYIPVELKTCTQ 319
Score = 244 (91.0 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 80/290 (27%), Positives = 142/290 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L +++N+L L QL L+KL+ L + N+LE L ++ +L L + N
Sbjct: 178 GLKKLQEFSVSHNKLMFLSVQLFQLTKLKRLRADDNKLEFLSDKVENLRELTFLNLSKNL 237
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
++ L T L+ + NQ+T + + L +L +SL NQ+ S++ +S L
Sbjct: 238 FKTITDNLCNCTMLKHLILCDNQLTQLPAN-IDRLKHLKELSLSGNQLNSLDEQISHLKD 296
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L+ + LS N LT ++ +++ ++ DLS NK+++F + ++++ L L
Sbjct: 297 LSKIELSGNVLT-YIPVELKTCTQITKADLSNNKLSQF------PYALCALSDLKYLNLS 349
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I L + I L L+L+ NKL + S L L LD+S N + +L
Sbjct: 350 GNSISELIPGISDIKDLEHLELNKNKLSSFSAC-LCSLTKLVYLDVSENEINSLPAVVSE 408
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKT 289
+ AL+ L + HN ++ L L D+++N IK I ++++ L+T
Sbjct: 409 -MKALQVLLLHHNKFGSFPEELCSLKGLKTLDISNNQIKTIPLKISRLET 457
Score = 234 (87.4 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 77/280 (27%), Positives = 144/280 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L L+ N+L SL+ Q+ L L + + N L +P +++ +Q+ +NN++
Sbjct: 271 LKHLKELSLSGNQLNSLDEQISHLKDLSKIELSGNVLTYIPVELKTCTQITKADLSNNKL 330
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ L L+ L+ N+ N I+ + ++ +L+ + L N+++S ++ L LTKL
Sbjct: 331 SQFPYALCALSDLKYLNLSGNSISELIPG-ISDIKDLEHLELNKNKLSSFSACLCSLTKL 389
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
YL +S N++ L + +K L+ + L +NK FG+ E ++G+ L + +
Sbjct: 390 VYLDVSENEINS-LPAVVSEMKALQVLLLHHNK---FGSFPEELCSLKGLKT---LDISN 442
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDIS--HNL-LTTL-EET 237
N+I+ + + + + L++S+N+ + P + L SL+ L + + L LT + EE
Sbjct: 443 NQIKTIPLKISRLETIKDLNVSNNQFASF-PSEICHLSSLEKLTVCQMNGLKLTKIPEEL 501
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
SK L +L EL +SHN+L + L L +A+NN
Sbjct: 502 SK--LVSLRELDISHNALKEMPDSIGELKYLVHL-IANNN 538
Score = 232 (86.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 81/312 (25%), Positives = 148/312 (47%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L NN +K+L L+ L++L++E+N+L LP +I L +L L ++NR++ L
Sbjct: 27 LLLQNNEIKTLRLNTVNLTNLEILILERNRLTQLPPEISLLHKLKVLNVSHNRLSCLPEE 86
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQ-NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 126
L L ++ ++ N I DEF L +L+++ L N++ +++ ++ + L L +
Sbjct: 87 LPKLVNIKELFLNHNNI-----DEFPFALKSLETLELAGNKLKTLSDTMVDMKNLKVLNI 141
Query: 127 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIEN 186
NQ++ F + L L ++ L N I ++G+ + E + HN++
Sbjct: 142 DSNQISIFPRV-LCYLPNLVSLSLCENFIQSL------PKDIKGLKKLQEFSVSHNKLMF 194
Query: 187 LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALE 246
L L + L RL NKL +S D L L L++S NL T+ + L+
Sbjct: 195 LSVQLFQLTKLKRLRADDNKLEFLS-DKVENLRELTFLNLSKNLFKTITDNLCN-CTMLK 252
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNSTLRIYLE 305
L + N LT+L + L L + L+ N + +++ Q++ LK +I L+ + Y+
Sbjct: 253 HLILCDNQLTQLPANIDRLKHLKELSLSGNQLNSLDEQISHLKDLSKI-ELSGNVLTYIP 311
Query: 306 GNPVLCDDSMRA 317
C +A
Sbjct: 312 VELKTCTQITKA 323
Score = 217 (81.4 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 59/189 (31%), Positives = 103/189 (54%)
Query: 97 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
N+ ++ LQNN+I ++ + LT L L L N+LT+ L +I L +L+ +++S+N+++
Sbjct: 23 NVKTLLLQNNEIKTLRLNTVNLTNLEILILERNRLTQ-LPPEISLLHKLKVLNVSHNRLS 81
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI 216
++ + NI EL L HN I+ AL L L+L+ NKL+T+S D +
Sbjct: 82 CL------PEELPKLVNIKELFLNHNNIDEFPFALKS---LETLELAGNKLKTLS-DTMV 131
Query: 217 GLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
+ +LK+L+I N ++ +LP L L + N + L KD GL L + ++HN
Sbjct: 132 DMKNLKVLNIDSNQISIFPRVL-CYLPNLVSLSLCENFIQSLPKDIKGLKKLQEFSVSHN 190
Query: 277 NIKAINIQL 285
+ +++QL
Sbjct: 191 KLMFLSVQL 199
Score = 214 (80.4 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 78/303 (25%), Positives = 147/303 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L +L L+ N K++ L + L+ L++ NQL LP++I L L + N++
Sbjct: 225 LRELTFLNLSKNLFKTITDNLCNCTMLKHLILCDNQLTQLPANIDRLKHLKELSLSGNQL 284
Query: 62 TSLD---GLLRGLTKLQVFN-------MDFNQITMVRRDEFQN------------LHNLD 99
SLD L+ L+K+++ ++ T + + + N L +L
Sbjct: 285 NSLDEQISHLKDLSKIELSGNVLTYIPVELKTCTQITKADLSNNKLSQFPYALCALSDLK 344
Query: 100 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
++L N I+ + +S + L +L L+ N+L+ F + L +L +D+S N+IN
Sbjct: 345 YLNLSGNSISELIPGISDIKDLEHLELNKNKLSSFSAC-LCSLTKLVYLDVSENEINSLP 403
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
V + + L L HN+ + L + GL LD+S+N+++TI P L+
Sbjct: 404 A------VVSEMKALQVLLLHHNKFGSFPEELCSLKGLKTLDISNNQIKTI-PLKISRLE 456
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNS---LTRLDKDFHGLPVLCKADLAHN 276
++K L++S+N + + L +LE+L V + LT++ ++ L L + D++HN
Sbjct: 457 TIKDLNVSNNQFASFP-SEICHLSSLEKLTVCQMNGLKLTKIPEELSKLVSLRELDISHN 515
Query: 277 NIK 279
+K
Sbjct: 516 ALK 518
Score = 209 (78.6 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 74/289 (25%), Positives = 136/289 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L L N+LK+L + + L++L I+ NQ+ P + L SL N I
Sbjct: 110 LKSLETLELAGNKLKTLSDTMVDMKNLKVLNIDSNQISIFPRVLCYLPNLVSLSLCENFI 169
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
SL ++GL KLQ F++ N++ + FQ L L + +N++ ++ + L +L
Sbjct: 170 QSLPKDIKGLKKLQEFSVSHNKLMFLSVQLFQ-LTKLKRLRADDNKLEFLSDKVENLREL 228
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+L LS N L + + D++ L+ + L N++ + + + ++ EL L
Sbjct: 229 TFLNLSKN-LFKTITDNLCNCTMLKHLILCDNQLTQLPAN------IDRLKHLKELSLSG 281
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N++ +LD + + LS+++LS N L T P + + D+S+N L+ +
Sbjct: 282 NQLNSLDEQISHLKDLSKIELSGNVL-TYIPVELKTCTQITKADLSNNKLSQFPY-ALCA 339
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
L L+ L +S NS++ L + L +L N + + + L T+
Sbjct: 340 LSDLKYLNLSGNSISELIPGISDIKDLEHLELNKNKLSSFSACLCSLTK 388
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 67/242 (27%), Positives = 116/242 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+ DL L LN N+L S L +L+KL L + +N++ +LP+ + L L ++N+
Sbjct: 363 IKDLEHLELNKNKLSSFSACLCSLTKLVYLDVSENEINSLPAVVSEMKALQVLLLHHNKF 422
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS---LSGL 118
S L L L+ ++ NQI + + L + +++ NNQ S S LS L
Sbjct: 423 GSFPEELCSLKGLKTLDISNNQIKTIPL-KISRLETIKDLNVSNNQFASFPSEICHLSSL 481
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
KL ++ +LT+ + +++ L LR +D+S+N + E + + + + L
Sbjct: 482 EKLTVCQMNGLKLTK-IPEELSKLVSLRELDISHNALK------EMPDSIGELKYLVHLI 534
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN-LLTTLEET 237
+NEI L ++ + L LDLS N+LR + P L LK ++ N L L++
Sbjct: 535 ANNNEISQLPKSITSLRNLQHLDLSENRLRYL-PAGLRHLYLLKDINFDGNSLFEPLQDV 593
Query: 238 SK 239
K
Sbjct: 594 CK 595
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 70/270 (25%), Positives = 118/270 (43%)
Query: 10 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 69
L+NN+L L LS L+ L + N + L I L L N N+++S L
Sbjct: 325 LSNNKLSQFPYALCALSDLKYLNLSGNSISELIPGISDIKDLEHLELNKNKLSSFSACLC 384
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 129
LTKL ++ N+I + + L + L +N+ S L L L L +S+N
Sbjct: 385 SLTKLVYLDVSENEINSLPA-VVSEMKALQVLLLHHNKFGSFPEELCSLKGLKTLDISNN 443
Query: 130 QLTEFLLDDIRGLKRLRTV-DLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD 188
Q+ L + RL T+ DL+ + N+F + + + + ++ ++ +
Sbjct: 444 QIKTIPLK----ISRLETIKDLNVSN-NQFASFPSEICHLSSLEKLTVCQMNGLKLTKIP 498
Query: 189 GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
L + L LD+SHN L+ + PD L L L ++N ++ L + S T L L+ L
Sbjct: 499 EELSKLVSLRELDISHNALKEM-PDSIGELKYLVHLIANNNEISQLPK-SITSLRNLQHL 556
Query: 249 FVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
+S N L L L +L + N++
Sbjct: 557 DLSENRLRYLPAGLRHLYLLKDINFDGNSL 586
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 268 (99.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 103/359 (28%), Positives = 171/359 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL +L L L+ N L+S++ + L +LQ L +++N + A+ P L L ++
Sbjct: 216 GLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSH 275
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
NR+ L + GL L V + N IT +R F++LH L+ + L +N+I + +
Sbjct: 276 NRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFE 335
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL +L L L+ NQ+ E + GL + ++LS N + R+ ++ QG+ +
Sbjct: 336 GLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCL-----RSLPEHVFQGLGRLHS 390
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+H+ + + G+ GL RL L N + +I GL L LD++ N LT L
Sbjct: 391 LHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLP 450
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHG-LPVLCKADLAHNNIK--AINIQLAL----- 287
L LE L +S+N LT L +D G L DL+HN ++ A + +L
Sbjct: 451 RQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRY 510
Query: 288 ----KTQCQIFGLNSTL-RIYLEGNPVLCDDSMRAVID-AMETINNNTKIHGETICQPD 340
Q F L R++L+ NP C ++A+ D A++ + +T+C+ D
Sbjct: 511 LNLRNNSLQTFVPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFV-QTVCEGD 568
Score = 244 (91.0 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 91/289 (31%), Positives = 142/289 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQLFS-QLGSLYANN 58
L+ L++L L + L+SLE Q LG L L L +E+N L +L + + + L SL N
Sbjct: 97 LSSLDFLNLQGSWLRSLEPQALLG-LQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGN 155
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
N + L+ GL RGL+ L N+ +N + ++ FQ L NL + L N++T + +L
Sbjct: 156 NLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLC 215
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL +L L LS N L + L RL+ + L N I R G+ +
Sbjct: 216 GLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPR-----AFLGMKALRW 270
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L HN + L + G+ GL L L+HN + ++ P F L L+ L + HN + L
Sbjct: 271 LDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLG 330
Query: 236 ETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
E KTF L LE L ++ N + + F GL + +L+ N ++++
Sbjct: 331 E--KTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSL 377
Score = 230 (86.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 90/306 (29%), Positives = 141/306 (46%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD 65
L+L+ N L S+ LS L L ++ + L +L P + L L+ N + SL
Sbjct: 79 LWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLA 138
Query: 66 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAY 123
GL R L ++ N + + F+ L +L ++L N + + ++ GL L
Sbjct: 139 AGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHE 198
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N+LT + GL LR +DLS N + R+ N + + +L L N
Sbjct: 199 LVLAGNKLTYLQPALLCGLGELRELDLSRNAL-----RSVKANVFIHLPRLQKLYLDRNL 253
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I + A +G+ L LDLSHN++ + D F GL L +L ++HN +T+L + L
Sbjct: 254 ITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDL 313
Query: 243 PALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLR 301
LEEL + HN + +L +K F GL L L N I + + FGL +
Sbjct: 314 HFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGA-------FFGLFNVAV 366
Query: 302 IYLEGN 307
+ L GN
Sbjct: 367 MNLSGN 372
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 269 (99.8 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 82/305 (26%), Positives = 148/305 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDI---QLFSQLGSLYAN 57
L+ L WL L+NN LK + + + +L + + NQL+ LP + S L + +
Sbjct: 700 LSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLS 759
Query: 58 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSL 115
N + L+ L LQ N+ N++ + R F NL L + L N++ +++ +
Sbjct: 760 YNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAF 819
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT---VDLSYNKINKFGTRNEGKNQVQGVT 172
+ L LA L L HNQL L + T +++S+N I F +++
Sbjct: 820 TVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASF------YDELSSYM 873
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
I++L + HN + D + L L+L+HN+L ++ F L+ L++L+++HN LT
Sbjct: 874 YIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLT 933
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQC 291
+L S L +L+EL +SHN L +L + F L L + N ++A+ ++ + T+
Sbjct: 934 SLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRL 993
Query: 292 QIFGL 296
+ +
Sbjct: 994 EFLDI 998
Score = 224 (83.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 80/289 (27%), Positives = 140/289 (48%)
Query: 2 LTDLNWLFLNNNRLKSL-EG--QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 58
+ +L+++ L+ N+LK+L G Q S L + + N LE L + Q F LG L N
Sbjct: 724 MRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERL--EAQTFHSLGDLQTLN 781
Query: 59 ---NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 114
NR+ ++ L L+ ++ +N++ + F L NL ++ L +NQ+ S++
Sbjct: 782 LQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLK 841
Query: 115 ----LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG 170
+S T L +SHN + F D++ + +D+S+N + K + N ++
Sbjct: 842 SFLYVSNTTTPLRLNVSHNHIASFY-DELSSYMYIYQLDISHNHVTKSDSFTNLANTLR- 899
Query: 171 VTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
F L L HN++ +L G + L L+++HN L ++ F GL+SL+ LD+SHN
Sbjct: 900 ----F-LNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHN 954
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
L L+ + L L L ++ N L L ++ L D+A N +
Sbjct: 955 QLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLEFLDIAENQL 1003
Score = 208 (78.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 81/299 (27%), Positives = 151/299 (50%)
Query: 1 GLTD-LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANN 58
GLT+ L +L L NRL ++ L +L L+ L + NQ+ L +++ F++ L L +
Sbjct: 522 GLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQL-NNLPSFTENLRVLSLSG 580
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMN-S 113
N + + L L+ T+L NM +N IT + F NL +I L+NN+IT ++
Sbjct: 581 NNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLG 640
Query: 114 SLSGLTKLAYLYLSHNQLT---EFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQ 169
S +GL ++ + LS N +T + +++ + L+ ++LS+ + + + +
Sbjct: 641 SFAGLEQIQEISLSFNDITIHHPLVFENVS--RTLKILELSFAVFPARSLESLDPLDALL 698
Query: 170 GVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDS---LKMLD 225
++ + L L +N ++ + + + LS ++LS N+L+T+ P D+ L +D
Sbjct: 699 PLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTL-PRGLFQSDAHSHLVEID 757
Query: 226 ISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINI 283
+S+N L LE + L L+ L + N L + + FH L L DL++N + +NI
Sbjct: 758 LSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRL--VNI 814
Score = 182 (69.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 71/279 (25%), Positives = 130/279 (46%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS----DIQLFSQLGSLYANNNRITS 63
L +++N + + + L+ L + NQL +L S D++ L A+NN +TS
Sbjct: 878 LDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILN--VAHNN-LTS 934
Query: 64 LDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
L +GL LQ ++ NQ+ ++ ++F NL L + + +N++ ++ + T+L
Sbjct: 935 LRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLE 994
Query: 123 YLYLSHNQLTEFLLDDIRGLK-RLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+L ++ NQL+ + + + LR++ +S+N + +Q ++++ L
Sbjct: 995 FLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQF-----LYDISLAR 1049
Query: 182 NEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD-FIGLDSLKMLDISHNLLTTLEETSK 239
N I L D ++ L+ LDLS N L T + + F+ L+ L + H L L
Sbjct: 1050 NRITILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVLPPLK- 1108
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
LP L L VS N L L L L +++HN +
Sbjct: 1109 --LPLLSYLDVSGNYLQELSP-LGSLRHLRHVNVSHNKL 1144
Score = 170 (64.9 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 79/304 (25%), Positives = 143/304 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG----SLYAN 57
L L L +N+NRL++L ++ ++L+ L I +NQL P + F+ +G S+ +
Sbjct: 967 LRKLRILRINSNRLRALPREVFMNTRLEFLDIAENQLSVWP--VPAFTDIGFTLRSIQMS 1024
Query: 58 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI--TSMNSS 114
+N + LD + L ++ N+IT++ + F L+NL ++ L N + T++
Sbjct: 1025 HNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNLREV 1084
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
+L L L H L ++L ++ L L +D+S N + + + + + ++
Sbjct: 1085 FVHTPRLRKLSLHHMGL--YVLPPLK-LPLLSYLDVSGNYLQEL-------SPLGSLRHL 1134
Query: 175 FELKLQHNEIENLDGALMGIHGLSR-LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+ + HN++ N A + R LDL+HN LR I+ D L L L+I +T
Sbjct: 1135 RHVNVSHNKLTNASCAAEHLPPSVRVLDLAHNPLRRITLHDLASLRHLAELNILDVKVTN 1194
Query: 234 LEETSKTFLPALEELFVS-HNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
+ SK L +L +L S H +L + GL L L N + + +LA T+ +
Sbjct: 1195 PQAFSK--LRSLRKLHASSHANLGEIVARIPGLQQLRVHCLEPNIGQQLFAKLANNTKIR 1252
Query: 293 IFGL 296
+ L
Sbjct: 1253 LLEL 1256
Score = 148 (57.2 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 78/289 (26%), Positives = 127/289 (43%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L++N+L L+ Q L KL++L I N+L ALP ++ + ++L L N
Sbjct: 942 GLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLEFLDIAEN 1001
Query: 60 RIT--SLDGLLR-GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSL 115
+++ + G T L+ M N + + F N L ISL N+IT + +++
Sbjct: 1002 QLSVWPVPAFTDIGFT-LRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTF 1060
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN-- 173
S L L L LS N L LR V + ++ K + G + +
Sbjct: 1061 SFLNNLTNLDLSQNPLVT---------TNLREVFVHTPRLRKLSLHHMGLYVLPPLKLPL 1111
Query: 174 IFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+ L + N ++ L L + L +++SHNKL S S+++LD++HN L
Sbjct: 1112 LSYLDVSGNYLQELS-PLGSLRHLRHVNVSHNKLTNASCAAEHLPPSVRVLDLAHNPLRR 1170
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLA-HNNIKAI 281
+ L L EL + +T + F L L K + H N+ I
Sbjct: 1171 ITLHDLASLRHLAELNILDVKVTN-PQAFSKLRSLRKLHASSHANLGEI 1218
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 77/297 (25%), Positives = 128/297 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L WL L+NNR+ + G S L + + N L P QLF QL L RI
Sbjct: 376 LQKLLWLDLSNNRIYHVAGNYLPRS-LVTMDLSSNLLTVFPQ--QLFEQLPEL-----RI 427
Query: 62 TSL-DGLLRGLT--KLQVF-------NMDFNQ--ITMVRRDEFQNLHN---LDSISLQNN 106
SL D L+R + +LQV +D Q I + D FQ ++ L +++L+ N
Sbjct: 428 VSLRDNLIRSVQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQN 487
Query: 107 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL-KRLRTVDLSYNKINKFGTRNEGK 165
+T + ++ T +A+L L+ N ++ GL + L +DL N++
Sbjct: 488 FVTQLPEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPVA---- 543
Query: 166 NQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLD 225
+ + ++ L L N+I L+ L L LS N I L L+
Sbjct: 544 --LSSLHHLKYLYLTSNQISQLNNLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYLN 601
Query: 226 ISHNLLTTLEE---TSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHNNI 278
+ +N +T + E ++ L+ + + +N +T L F GL + + L+ N+I
Sbjct: 602 MGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDI 658
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 265 (98.3 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 101/337 (29%), Positives = 158/337 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL +L L L+ N L+S++ + L KLQ L ++ N L A+ P L L ++
Sbjct: 216 GLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSH 275
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 116
NR+ L + GL L V + N + +R F++LH L+ + L +N++ + +
Sbjct: 276 NRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFE 335
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL +L L L+ NQ+ E GL + ++LS N + RN + +G+ +
Sbjct: 336 GLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCL-----RNLPEQVFRGLGKLHS 390
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+H+ + + G+ GL RL L N L I GL L LD++ N LT L
Sbjct: 391 LHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLP 450
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHG-LPVLCKADLAHNNIKAI-NIQLALKTQCQI 293
L LE L +S N L+ L D G L D++HN ++A+ LA Q +
Sbjct: 451 GRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRY 510
Query: 294 FGL-NSTLR-----------IYLEGNPVLCDDSMRAV 318
L N++LR ++LEGNP C +RA+
Sbjct: 511 LSLRNNSLRTFVPQPLGLERLWLEGNPWDCGCPLRAL 547
Score = 243 (90.6 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 91/283 (32%), Positives = 137/283 (48%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD 65
L+L++N S+ G LS L L ++ + L +L P + L L+ N++ SL
Sbjct: 79 LWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLA 138
Query: 66 G--LLR--GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
L GL L + N N ++ V FQ L NL ++L N + + +++ GL
Sbjct: 139 AHTFLHTPGLASLGLHN---NLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLAN 195
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L L+ N+LT GL LR +DLS N + R+ N + + +L L
Sbjct: 196 LRELVLAGNKLTYLQPALFCGLGELRELDLSRNAL-----RSVKANVFVKLPKLQKLYLD 250
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
HN + + GA +G+ L LDLSHN++ + D F GL L +L ++HN L +L +
Sbjct: 251 HNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTF 310
Query: 240 TFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAI 281
L LEEL + HN L +L +K F GL L L N I+ I
Sbjct: 311 KDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEI 353
Score = 223 (83.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 92/345 (26%), Positives = 154/345 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYAN 57
GL +L L L N+L+SL L T L L + N L + + Q + L L
Sbjct: 120 GLQNLYHLHLERNQLRSLAAHTFLHTPG-LASLGLHNNLLSRVEEGLFQGLTNLWDLNLG 178
Query: 58 NNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
N + L D GL L+ + N++T ++ F L L + L N + S+ +++
Sbjct: 179 WNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVF 238
Query: 117 -GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L KL LYL HN L G+K LR +DLS+N++ G + G+ +
Sbjct: 239 VKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVG--GLLED---TFPGLLGLH 293
Query: 176 ELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L+L HN + +L +H L L L HN+LR + F GL L++L ++ N + +
Sbjct: 294 VLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEI 353
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
+ + L + + +S N L L + F GL L L H+ + + +
Sbjct: 354 KAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHT-------F 406
Query: 294 FGLNSTLRIYLEGNPV--LCDDSMRAVIDAME---TINNNTKIHG 333
GL+ R++L+ N + + + S+ + + +E T N T + G
Sbjct: 407 AGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPG 451
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 265 (98.3 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 76/265 (28%), Positives = 135/265 (50%)
Query: 5 LNWLFLNNNRLKSLE-GQLGTL-SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
L +L++NNNR+ S+E G L S L +L + +N++ A+P + QL L N N+I
Sbjct: 169 LKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIK 228
Query: 63 SLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTK 120
++DGL +GL L+ M N +T + F L N++ + L +N +T + L GL
Sbjct: 229 NVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLM 288
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L+LS N + D ++L +DL++N +++ + G++ + L +
Sbjct: 289 LRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDD-----SSFLGLSLLNALHIG 343
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPD---DFIGLDSLKMLDISHNLLTTLEE 236
+N++ + D A G+ L LDL +N++ D F GLD L+ L + N + ++ +
Sbjct: 344 NNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITK 403
Query: 237 TSKTFLPALEELFVSHNSLTRLDKD 261
+ L LE L +S N++ L +
Sbjct: 404 KAFAGLDTLEHLDLSGNAIMSLQSN 428
Score = 254 (94.5 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 89/316 (28%), Positives = 156/316 (49%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSL-D 65
L LN NR+ ++ ++ L +LQ L + +N+++ + Q L SL N +T L D
Sbjct: 197 LKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMD 256
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYL 124
G GL+ ++V +D N +T + + L L + L N I ++ + KL+ L
Sbjct: 257 GAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSEL 316
Query: 125 YLSHNQLTEFLLDD--IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L+ N L+ LDD GL L + + NK++ +G+T++ L L++N
Sbjct: 317 DLTFNHLSR--LDDSSFLGLSLLNALHIGNNKVSYIADC-----AFRGLTSLKTLDLRNN 369
Query: 183 EI----ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
EI E++ GA G+ L +L L N++R+I+ F GLD+L+ LD+S N + +L+ +
Sbjct: 370 EISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNA 429
Query: 239 KTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKA-INIQLALKTQCQIFGLN 297
+ + L++L ++ +SL D LP +A NN ++ +N A Q+
Sbjct: 430 FSQMKKLQQLHLNTSSLL-CDCQLRWLPQW----VAENNFQSFVNASCA---HPQLLKGR 481
Query: 298 STLRIYLEGNPVLCDD 313
S + +G +CDD
Sbjct: 482 SIFTVSPDG--FVCDD 495
Score = 229 (85.7 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 85/308 (27%), Positives = 140/308 (45%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS-LD 65
L L++NRL ++ L L LQ + + N+LE +P+ + + + L N I L
Sbjct: 79 LDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKILP 138
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTK-LAY 123
L L+ ++ N I+ +R F L L + + NN+++SM L L
Sbjct: 139 EQLEAFQSLETLDLSNNNISELRT-AFPPLQ-LKYLYINNNRVSSMEPGYFDNLASTLLV 196
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N+++ + + L +L+ ++L+ NKI +N QG+ + LK+Q N
Sbjct: 197 LKLNRNRISA-IPPKMFKLPQLQHLELNRNKI-----KNVDGLTFQGLGALKSLKMQRNG 250
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+ L DGA G+ + L L HN L I+ GL L+ L +S N + + + F
Sbjct: 251 VTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFC 310
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLR 301
L EL ++ N L+RLD F GL +L + +N + I C GL S
Sbjct: 311 QKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYI-------ADCAFRGLTSLKT 363
Query: 302 IYLEGNPV 309
+ L N +
Sbjct: 364 LDLRNNEI 371
Score = 195 (73.7 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 64/236 (27%), Positives = 119/236 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNN 59
L L L LN N++K+++G L L+ L +++N + L S + L ++N
Sbjct: 214 LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHN 273
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
+T + G L GL L+ ++ N I + D ++ L + L N ++ ++ SS G
Sbjct: 274 NLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLG 333
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L+ L L++ +N+++ ++ D RGL L+T+DL N+I+ T + G+ + +
Sbjct: 334 LSLLNALHIGNNKVS-YIADCAFRGLTSLKTLDLRNNEIS--WTIEDMSGAFSGLDRLRQ 390
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
L LQ N I ++ A G+ L LDLS N + ++ + F + L+ L ++ + L
Sbjct: 391 LILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSL 446
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 65/257 (25%), Positives = 120/257 (46%)
Query: 30 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVR 88
LL + +L LP + + + L ++NR++ + L L LQ ++ N++ +
Sbjct: 57 LLDCSRRRLVRLPDPLPAW--VTRLDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETI- 113
Query: 89 RDEFQNLH-NLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
++ N+ +SL N I + L L L LS+N ++E L L+ L+
Sbjct: 114 -PNLGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNISE-LRTAFPPLQ-LK 170
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNK 206
+ ++ N+++ G T + LKL N I + + + L L+L+ NK
Sbjct: 171 YLYINNNRVSSM---EPGYFDNLAST-LLVLKLNRNRISAIPPKMFKLPQLQHLELNRNK 226
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDF-HGL 265
++ + F GL +LK L + N +T L + + L +E L + HN+LT + K + +GL
Sbjct: 227 IKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGL 286
Query: 266 PVLCKADLAHNNIKAIN 282
+L + L+ N I I+
Sbjct: 287 LMLRELHLSQNAINRIS 303
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 258 (95.9 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 96/343 (27%), Positives = 149/343 (43%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANN 58
GL L L + + + +L + LS L+ L ++ ++L LP D+ L SL
Sbjct: 95 GLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQG 154
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 116
N++ +L G L + L L+ N+ N +T + + FQ+L L + L NN + + +L
Sbjct: 155 NQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALG 214
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L+ L L+L N +TE L L + L +N I + + N+
Sbjct: 215 SLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPV-----SLFSSLHNLTF 269
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+ N + L +G GL L LS+N+L TI F L L L +SHN +T L
Sbjct: 270 LSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLP 329
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
E L L +L + N+LT L FH L L +L+ N + + + T +F
Sbjct: 330 EHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLPGGI-FDTNYDLF 388
Query: 295 GLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETIC 337
L L GNP CD + + + NN + T C
Sbjct: 389 NLA------LLGNPWQCDCHLSYLTSWLRLYNNQIS-NTHTFC 424
Score = 146 (56.5 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 56/205 (27%), Positives = 93/205 (45%)
Query: 85 TMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 143
T VR F NL + N Q+ + + GL +L L ++ + ++ L
Sbjct: 62 TTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLS 121
Query: 144 RLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE-LKLQHNEIENLDGALM-GIHGLSRLD 201
L + L ++++ G + + +I E L+LQ N++ L G L + L L+
Sbjct: 122 SLEKLTLDFDRLA--GLPEDLFCHM----DILESLQLQGNQLRTLPGRLFQSLRDLRTLN 175
Query: 202 LSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD 261
L+ N L + F L L+ML +S+N+L L E + L +L+ELF+ N++T L
Sbjct: 176 LAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPH 235
Query: 262 -FHGLPVLCKADLAHNNIKAINIQL 285
F L L L HN I + + L
Sbjct: 236 LFSQLFSLEMLWLQHNAICHLPVSL 260
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 258 (95.9 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 99/337 (29%), Positives = 161/337 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL +L L L+ N L+S++ + L KLQ L ++ N + A+ P L L ++
Sbjct: 220 GLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSH 279
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 116
NR+ SL + GL L V + N + +R F++LH L+ + L +N++ + + +
Sbjct: 280 NRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFA 339
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL +L L L+ NQL E GL+ L ++LS N + R+ + QG+ +
Sbjct: 340 GLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCL-----RDLPERAFQGLAKLHS 394
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+ + L A G+ GL RL L N + + GL L LD++ N LT L
Sbjct: 395 LHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLP 454
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHG-LPVLCKADLAHNNIKAINIQ-LALKTQCQI 293
L LE L ++ N L+ L D G L D++HN ++A+ LA ++ +
Sbjct: 455 GRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSRLRF 514
Query: 294 FGL-NSTLR-----------IYLEGNPVLCDDSMRAV 318
L N++LR ++LEGNP C ++ A+
Sbjct: 515 LSLRNNSLRTFAPQPPGLERLWLEGNPWDCGCALGAL 551
Score = 238 (88.8 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 103/347 (29%), Positives = 156/347 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 58
GL L L L +NRL +L L T L L + N L L D LF L L+ N
Sbjct: 124 GLRGLCHLHLEHNRLHALAAHTFLHTPG-LASLGLSNNLLSRL--DEGLFRGLAHLWDLN 180
Query: 59 ---NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 114
N +T L D +GL L+ + N++ ++ F L L + L N + S+ ++
Sbjct: 181 LGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKAN 240
Query: 115 LS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
+ L KL LYL HN + G+K LR +DLS+N++ G+ E + G+
Sbjct: 241 VFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRV---GSLLE--DSFPGLLG 295
Query: 174 IFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
+ L+L HN + L +H L L L HN+LR + + F GL L++L ++ N L
Sbjct: 296 LHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQ 355
Query: 233 TLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQC 291
L L L L +S N L L ++ F GL L L + + LA
Sbjct: 356 ELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLG-PLAFA--- 411
Query: 292 QIFGLNSTLRIYLEGNPVLCDD--SMRAVIDAME---TINNNTKIHG 333
GL+ R++L+GN + D S+ + + +E T N T + G
Sbjct: 412 ---GLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPG 455
Score = 216 (81.1 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 85/283 (30%), Positives = 137/283 (48%)
Query: 8 LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD 65
L+L+ N S+ LS L L ++ + L +L P + L L+ +NR+ +L
Sbjct: 83 LWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALA 142
Query: 66 G--LLR--GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
L GL L + N N ++ + F+ L +L ++L N +T + +++ GL
Sbjct: 143 AHTFLHTPGLASLGLSN---NLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAG 199
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L L+ N+L GL LR +DLS N + R+ N + + +L L
Sbjct: 200 LRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTL-----RSVKANVFVKLPKLQKLYLD 254
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
HN + + GA +G+ L LDLSHN++ ++ D F GL L +L +SHN+L L +
Sbjct: 255 HNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTF 314
Query: 240 TFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L LEEL + HN L +L ++ F GL L L N ++ +
Sbjct: 315 KDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQEL 357
Score = 136 (52.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 65/236 (27%), Positives = 102/236 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL +L L L++N L+ L E L+KL L +E L L P S L L+
Sbjct: 364 GLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKG 423
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
N I +D L GL +L ++ NQ+T + FQ+L L+ + L N+++++ + G
Sbjct: 424 NSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLSALPADALG 483
Query: 118 -LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ------- 169
L + +L +SHN+L + L RLR + L N + F + G ++
Sbjct: 484 PLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSLRTFAPQPPGLERLWLEGNPWD 543
Query: 170 -----GVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLD 219
G F L+ Q + AL G L++N + SP GLD
Sbjct: 544 CGCALGALRAFALQ-QPASVPRFVQALAEGNDDRQPPVLAYNNITCASPPSLAGLD 598
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 52/192 (27%), Positives = 86/192 (44%)
Query: 100 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
S+ + +T + L T+ L+L N + R L L ++L + G
Sbjct: 61 SVFCSSRNLTQLPGGLPPGTRA--LWLDGNNFSSIPAAAFRNLSGLGFLNLQGS-----G 113
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIH--GLSRLDLSHNKLRTISPDDFIG 217
+ + G+ + L L+HN + L A +H GL+ L LS+N L + F G
Sbjct: 114 LASLEPQALLGLRGLCHLHLEHNRLHAL-AAHTFLHTPGLASLGLSNNLLSRLDEGLFRG 172
Query: 218 LDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
L L L++ N LT L +T+ L L EL ++ N L L F GL L + DL+ N
Sbjct: 173 LAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRN 232
Query: 277 NIKAINIQLALK 288
++++ + +K
Sbjct: 233 TLRSVKANVFVK 244
>UNIPROTKB|F1NRN7 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
PANTHER:PTHR23155:SF38 IPI:IPI00600917 EMBL:AADN02030891
Ensembl:ENSGALT00000014266 Uniprot:F1NRN7
Length = 529
Score = 256 (95.2 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 71/290 (24%), Positives = 140/290 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ LT L + FN+IT V +D +NL L +S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLTSLATLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L ++I ++ +DL +N++ + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPEEIGSCTQITNLDLQHNELLDL------PETIGNLSSLSRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L L L ++ N + +
Sbjct: 294 NRLSAIPKSLAKCSELDELNLENNNISTL-PEGLLSSLVKLTSLTLARNCFQSYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 250 (93.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 81/303 (26%), Positives = 145/303 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L+ N L SL L L KL++L + N+L +PS + + L +LY NRI
Sbjct: 145 LVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRI 204
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T+++ ++ L+KL + ++ N+I + E L NL ++ + +NQ+ + + T++
Sbjct: 205 TTVEKDIKNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPEEIGSCTQI 263
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L HN+L + L + I L L + L YN+++ + + + EL L++
Sbjct: 264 TNLDLQHNELLD-LPETIGNLSSLSRLGLRYNRLSAI------PKSLAKCSELDELNLEN 316
Query: 182 NEIENL-DGALMGIHGLSRLDLSHNKLRTI---SPDDFIGLDSLKMLDISHNLLTTLEET 237
N I L +G L + L+ L L+ N ++ P F + SL M HN + +
Sbjct: 317 NNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNM---EHNRINKIPFG 373
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
+ L +L + N LT L DF + + +LA N + I ++ ++ L+
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILS 433
Query: 298 STL 300
+ L
Sbjct: 434 NNL 436
Score = 244 (91.0 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 82/302 (27%), Positives = 155/302 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L NR+ ++E + LSKL +L I +N+++ LP++I L +L +N++
Sbjct: 191 LTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDE-FQNLHNLDSISLQNNQITSMNSSLSGLTK 120
L + T Q+ N+D ++ E NL +L + L+ N+++++ SL+ ++
Sbjct: 251 EHLPEEIGSCT--QITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSE 308
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++
Sbjct: 309 LDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVG--GPSQF---STIYSLNME 363
Query: 181 HNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
HN I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DV 421
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNS 298
+ L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 481
Query: 299 TL 300
L
Sbjct: 482 QL 483
Score = 226 (84.6 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/246 (27%), Positives = 126/246 (51%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L + L + L++L L + N+L++LP+++ L +L + N +TSL
Sbjct: 105 LDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L+KL L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LTSLATLYLRFNRITTVEKDIKNLSKLTMLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PEEIGSCTQITNLDLQHNELLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + LSRL L +N+L I P L L++ +N ++TL E + L L
Sbjct: 277 PETIGNLSSLSRLGLRYNRLSAI-PKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 208 (78.3 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 70/241 (29%), Positives = 116/241 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNR 60
L+ L+ L L NRL ++ L S+L L +E N + LP + +L SL N
Sbjct: 283 LSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNC 342
Query: 61 ITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
S G + + NM+ N+I + F L +++++NQ+TS+ T
Sbjct: 343 FQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
+ L L+ NQLT+ + +D+ GL L + LS N + K + + + + EL L
Sbjct: 403 SMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL------PHGIGNLRKLRELDL 455
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-EETS 238
+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L EE
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEIG 514
Query: 239 K 239
K
Sbjct: 515 K 515
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L +G L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQIT 85
+T+L + LT L + N +T
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLT 507
>UNIPROTKB|E1BU15 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019903 "protein phosphatase binding" evidence=IEA] [GO:0046579
"positive regulation of Ras protein signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AADN02030891 IPI:IPI00571083 Ensembl:ENSGALT00000014267
Uniprot:E1BU15
Length = 582
Score = 256 (95.2 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 71/290 (24%), Positives = 140/290 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ LT L + FN+IT V +D +NL L +S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLTSLATLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L ++I ++ +DL +N++ + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPEEIGSCTQITNLDLQHNELLDL------PETIGNLSSLSRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L L L ++ N + +
Sbjct: 294 NRLSAIPKSLAKCSELDELNLENNNISTL-PEGLLSSLVKLTSLTLARNCFQSYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 250 (93.1 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 81/303 (26%), Positives = 145/303 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L+ N L SL L L KL++L + N+L +PS + + L +LY NRI
Sbjct: 145 LVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRI 204
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T+++ ++ L+KL + ++ N+I + E L NL ++ + +NQ+ + + T++
Sbjct: 205 TTVEKDIKNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPEEIGSCTQI 263
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L HN+L + L + I L L + L YN+++ + + + EL L++
Sbjct: 264 TNLDLQHNELLD-LPETIGNLSSLSRLGLRYNRLSAI------PKSLAKCSELDELNLEN 316
Query: 182 NEIENL-DGALMGIHGLSRLDLSHNKLRTI---SPDDFIGLDSLKMLDISHNLLTTLEET 237
N I L +G L + L+ L L+ N ++ P F + SL M HN + +
Sbjct: 317 NNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNM---EHNRINKIPFG 373
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
+ L +L + N LT L DF + + +LA N + I ++ ++ L+
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILS 433
Query: 298 STL 300
+ L
Sbjct: 434 NNL 436
Score = 244 (91.0 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 82/302 (27%), Positives = 155/302 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L NR+ ++E + LSKL +L I +N+++ LP++I L +L +N++
Sbjct: 191 LTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDE-FQNLHNLDSISLQNNQITSMNSSLSGLTK 120
L + T Q+ N+D ++ E NL +L + L+ N+++++ SL+ ++
Sbjct: 251 EHLPEEIGSCT--QITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSE 308
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++
Sbjct: 309 LDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVG--GPSQF---STIYSLNME 363
Query: 181 HNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
HN I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DV 421
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNS 298
+ L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 481
Query: 299 TL 300
L
Sbjct: 482 QL 483
Score = 227 (85.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 75/254 (29%), Positives = 124/254 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNR 60
L+ L+ L L NRL ++ L S+L L +E N + LP + +L SL N
Sbjct: 283 LSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNC 342
Query: 61 ITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
S G + + NM+ N+I + F L +++++NQ+TS+ T
Sbjct: 343 FQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
+ L L+ NQLT+ + +D+ GL L + LS N + K + + + + EL L
Sbjct: 403 SMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL------PHGIGNLRKLRELDL 455
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L E
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEIG 514
Query: 240 TFLPALEELFVSHN 253
T L LEEL+++ N
Sbjct: 515 T-LENLEELYLNDN 527
Score = 226 (84.6 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 67/246 (27%), Positives = 126/246 (51%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L + L + L++L L + N+L++LP+++ L +L + N +TSL
Sbjct: 105 LDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L+KL L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LTSLATLYLRFNRITTVEKDIKNLSKLTMLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PEEIGSCTQITNLDLQHNELLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + LSRL L +N+L I P L L++ +N ++TL E + L L
Sbjct: 277 PETIGNLSSLSRLGLRYNRLSAI-PKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 164 (62.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 44/133 (33%), Positives = 73/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L +G L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+T+L + LT L + N +T + +E L NL+ + L +N + S+ L+ +
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLPFELALCS 541
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 542 KLSIMSIENCPLS 554
Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 65/238 (27%), Positives = 108/238 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L L L L N +S G S + L +E N++ +P I FS+ L L
Sbjct: 330 LVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 387
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +L+ + L NN + + +
Sbjct: 388 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGIGN 446
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N++ T G + +TN+ L
Sbjct: 447 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLT---TLPRG---IGHLTNLTHL 499
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N + +L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 500 GLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 556
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 258 (95.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 81/267 (30%), Positives = 138/267 (51%)
Query: 5 LNWLFLNNNRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
L +L L+NNR+ +LE G LS L+V + +N++ +P I L L NRI
Sbjct: 169 LKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIK 228
Query: 63 SLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTK 120
++GL +GL L+ M N I+ ++ F L+N++ + L++N +T +N L GL
Sbjct: 229 IVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRM 288
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L LY+S N + D +RL +DLSYN++ TR + ++ G++ + L L
Sbjct: 289 LQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQL----TRLD-ESAFVGLSLLERLNLG 343
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD---FIGLDSLKMLDISHNLLTTLEE 236
N + ++ DG + L LDL +N++ D F GL SL L + N + ++
Sbjct: 344 DNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSI-- 401
Query: 237 TSKTF--LPALEELFVSHNSLTRLDKD 261
T K F L +LE L +++N++ + ++
Sbjct: 402 TKKAFIGLESLEHLDLNNNAIMSIQEN 428
Score = 234 (87.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 90/325 (27%), Positives = 162/325 (49%)
Query: 10 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSL-DGL 67
LN NR+ + ++ L LQ L +++N+++ + Q L SL N I+ L DG
Sbjct: 199 LNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGA 258
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYL 126
GL ++ ++ N +T V + L L + + N I ++ + +L+ L L
Sbjct: 259 FFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDL 318
Query: 127 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI-- 184
S+NQLT GL L ++L N++ +G + ++N+ L L++NEI
Sbjct: 319 SYNQLTRLDESAFVGLSLLERLNLGDNRVTHIA---DGVFRF--LSNLQTLDLRNNEISW 373
Query: 185 --ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
E+ A G+ L++L L N++++I+ FIGL+SL+ LD+++N + +++E + +
Sbjct: 374 AIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFS-Q 432
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIK-AINIQLALKTQCQIFGLNSTLR 301
L+EL ++ +SL D H L L + L NN + ++N+ A + G S L
Sbjct: 433 THLKELILNTSSLLC---DCH-LKWLLQW-LVDNNFQHSVNVSCAHPEW--LAG-QSILN 484
Query: 302 IYLEGNPVLCDDSMRAVIDAM-ETI 325
+ L+ +CDD ++ I ETI
Sbjct: 485 VDLKD--FVCDDFLKPQIRTHPETI 507
Score = 229 (85.7 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 78/279 (27%), Positives = 139/279 (49%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG- 66
L ++NRL + L + + LQ + + N+L +P + S + L +N I ++
Sbjct: 80 LDFSHNRLSNWNISLESQT-LQEVKMNYNELTEIPYFGEPTSNITLLSLVHNIIPEINAQ 138
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTK-LAYL 124
L+ L+ ++ N I+ ++ F + L ++L NN+IT++ + L+ L +
Sbjct: 139 ALQFYPALESLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFDNLSSSLLVV 197
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L+ N+++ + I L L+ ++L N+I EG QG+ ++ LK+Q N I
Sbjct: 198 KLNRNRMS-MIPPKIFKLPHLQFLELKRNRIKIV----EGLT-FQGLDSLRSLKMQRNGI 251
Query: 185 ENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
L DGA G++ + L+L HN L ++ GL L+ L +S N + + + F
Sbjct: 252 SKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQ 311
Query: 244 ALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L EL +S+N LTRLD+ F GL +L + +L N + I
Sbjct: 312 RLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHI 350
Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 65/220 (29%), Positives = 111/220 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLF--SQLGSLYANN 58
L L +L L NR+K +EG L L+ L +++N + L D F + + L +
Sbjct: 214 LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKL-KDGAFFGLNNMEELELEH 272
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N +T ++ G L GL LQ + N I + D ++ L + L NQ+T ++ S+
Sbjct: 273 NNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFV 332
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL+ L L L N++T R L L+T+DL N+I+ + G+T++ +
Sbjct: 333 GLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEIS--WAIEDASEAFAGLTSLTK 390
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDF 215
L LQ N+I+++ A +G+ L LDL++N + +I + F
Sbjct: 391 LILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAF 430
Score = 140 (54.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 56/245 (22%), Positives = 108/245 (44%)
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L GL +DF+ + + L + + N++T + + + L L
Sbjct: 69 LSGLLPPDTAILDFSHNRLSNWNISLESQTLQEVKMNYNELTEIPYFGEPTSNITLLSLV 128
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
HN + E ++ L ++DLS N I++ T + + Q++ L L +N I L
Sbjct: 129 HNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQLK------YLNLSNNRITTL 182
Query: 188 D-GALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPAL 245
+ G + L + L+ N++ I P F L L+ L++ N + +E + L +L
Sbjct: 183 EAGCFDNLSSSLLVVKLNRNRMSMIPPKIF-KLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 246 EELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYL 304
L + N +++L D F GL + + +L HNN+ +N + ++GL ++Y+
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVN-------KGWLYGLRMLQQLYV 294
Query: 305 EGNPV 309
N +
Sbjct: 295 SQNAI 299
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 258 (95.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 76/290 (26%), Positives = 147/290 (50%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
G+ L LFL++N L + G G+++++ + + +N+L+ + + Q+F+Q+ +
Sbjct: 292 GMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKI--EFQMFTQMNYVELLDL 349
Query: 56 ANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS- 113
A NN IT ++ + + + + N+ N + ++ F+N N+ + L +N++ + +
Sbjct: 350 AENN-ITKIEKNSFKDIYQA-IINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRR 407
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
S T Y LS+N LT I+ + L+ ++ SYN I + KN +
Sbjct: 408 SFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIP-----KNCFPKLYE 462
Query: 174 IFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
+ + + HN I ++ +G + L +DLSHN +R I F L +L +D+SHN L
Sbjct: 463 LHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELV 522
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPV-LCKADLAHNNIKAI 281
++ S L +L +L++++N L +L F LP+ L + +HN + I
Sbjct: 523 SVVRGSLAKLTSLRQLYLNNNQLEKL---FQ-LPISLNELYFSHNRLTNI 568
Score = 253 (94.1 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 71/265 (26%), Positives = 137/265 (51%)
Query: 23 GTLSKLQLLVIEQNQLEALPSDI----QLFSQLGSLYANNNRITSLD-GLLRGLTKLQVF 77
G L K + LVI+ + + LP D+ ++ + LG + N ++ L + L KL+
Sbjct: 144 GILGKAKELVIDGHAFQQLPKDLFAGQEIANSLGIIRVTNGNLSDLPIETFQPLRKLKTL 203
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLL 136
++ NQ+ ++R++F+NL L+ + + +NQI + + ++ LTKL + +SHN L+E
Sbjct: 204 DLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALSELSR 263
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IH 195
L+ + LS+N+I + N +G+ + L L N + ++ G I
Sbjct: 264 GTFARNSVLKVLHLSHNQIARLDA-----NSFRGMRFLRRLFLSDNVLTDIGRGTFGSIA 318
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS-KTFLPALEELFVSHNS 254
+ +DL+ N+L+ I F ++ +++LD++ N +T +E+ S K A+ + VSHN+
Sbjct: 319 RIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAI--INVSHNA 376
Query: 255 LTRLDKD-FHGLPVLCKADLAHNNI 278
L ++ F + DL+HN +
Sbjct: 377 LELIETAAFENCVNITVLDLSHNRL 401
Score = 246 (91.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 78/286 (27%), Positives = 140/286 (48%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
L L L L+ N+L++L+ Q L +L++L I NQ++ L + I ++LG ++N
Sbjct: 197 LRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHN 256
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG- 117
++ L G + L+V ++ NQI + + F+ + L + L +N +T + G
Sbjct: 257 ALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGS 316
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+ ++ + L+ N+L + + + +DL+ N I K +N K+ Q + N+
Sbjct: 317 IARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKI-EKNSFKDIYQAIINV--- 372
Query: 178 KLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
HN +E ++ A ++ LDLSHN+L S F +S+N LT L +
Sbjct: 373 --SHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQ 430
Query: 237 TSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
+ L+ L S+NS+T + K+ F L L D++HNNI +I
Sbjct: 431 IPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSI 476
Score = 237 (88.5 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 84/289 (29%), Positives = 135/289 (46%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQL---GSLYANNN 59
LN L+ ++NRL ++ G ++ L L + NQL + L + F+ L L NN
Sbjct: 555 LNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGES--FTGLLVVQRLKLQNN 612
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSG 117
I+ + ++ LQ +++ N IT + R F L L ++L NQ+ ++ + G
Sbjct: 613 GISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEG 672
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L +L L LS N + D GL LR +DLS+N + K + G + + ++ L
Sbjct: 673 LLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGV--LDDLLSLETL 730
Query: 178 KLQHNEIENLDGALMGIH-----GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L HN I + H L L+LS+N + ++ D G L LD+SHN +
Sbjct: 731 DLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQIN 790
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFH--GLPV-LCKADLAHNNI 278
L + +L+ L +S+N L+ L + H LP L DL+HN I
Sbjct: 791 DLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKI 839
Score = 221 (82.9 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 84/292 (28%), Positives = 147/292 (50%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY----A 56
L +L+ + +++N + S+ G TL L+ + + N + + S F L +L +
Sbjct: 460 LYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSST--FGTLPTLLEMDLS 517
Query: 57 NNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL- 115
+N ++ + G L LT L+ ++ NQ+ + FQ +L+ + +N++T++ S
Sbjct: 518 HNELVSVVRGSLAKLTSLRQLYLNNNQLEKL----FQLPISLNELYFSHNRLTNIPSGTW 573
Query: 116 SGLTKLAYLYLSHNQLTEFLL-DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
+ L YL LSHNQL + L + GL ++ + L N I++ K+ V ++ +
Sbjct: 574 PVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQ-----PPKDAVAVMSTL 628
Query: 175 FELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
L L++N I L+ + G + L L+L N+++ IS F GL L L++S N + T
Sbjct: 629 QYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQT 688
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKDFHG----LPVLCKADLAHNNIKAI 281
L+ LP+L L +S NSLT+LD +G L L DL+HN I +
Sbjct: 689 LQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFV 740
Score = 187 (70.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 88/341 (25%), Positives = 151/341 (44%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN- 58
GL + L L NN + + + +S LQ L +E N + L + F +L L+ N
Sbjct: 600 GLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTL--ERSAFGKLPVLFELNL 657
Query: 59 --NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N++ + GL +L N+ N I ++ D F L +L ++ L N +T +++
Sbjct: 658 YGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKT 717
Query: 116 SG----LTKLAYLYLSHNQL---TEFLLDDIRGLK-RLRTVDLSYNKINKFGTRNEGKNQ 167
+G L L L LSHN++ T+ + + LR ++LSYN + T +
Sbjct: 718 NGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYN-LMPILTYDI---- 772
Query: 168 VQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFI-GL-DSLKML 224
G + L + HN+I +L G + L LD+S+N+L + ++ I L +L L
Sbjct: 773 TFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWL 832
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDF-----HGLPVLCKADLAHNNIK 279
D+SHN + L + + +L+ + +++NSL + +G VL + H
Sbjct: 833 DLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLLAGNPLHCGCN 892
Query: 280 AINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVID 320
A ++ + Q I G IY G P L D +D
Sbjct: 893 ARPLKYFMLQQT-IAG-EDLKSIYC-GTPALIKDKQLISLD 930
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 46/167 (27%), Positives = 86/167 (51%)
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L + +++ L++ ++ + L++L+T+DL N++ N +NQ + + + L +
Sbjct: 176 LGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLE-----NLKRNQFKNLRELEVLDIS 230
Query: 181 HNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
HN+I+ L+ + + L ++SHN L +S F LK+L +SHN + L+ S
Sbjct: 231 HNQIKKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSF 290
Query: 240 TFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
+ L LF+S N LT + + F + + DLA N +K I Q+
Sbjct: 291 RGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQM 337
>UNIPROTKB|A6QLV3 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9913 "Bos taurus" [GO:0019903 "protein phosphatase binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 EMBL:BC148097
IPI:IPI00729412 RefSeq:NP_001095413.1 UniGene:Bt.72530
ProteinModelPortal:A6QLV3 PRIDE:A6QLV3 Ensembl:ENSBTAT00000010138
GeneID:511417 KEGG:bta:511417 CTD:8036 HOVERGEN:HBG055661
InParanoid:A6QLV3 OMA:LPHGIGN OrthoDB:EOG408N7W NextBio:20869918
ArrayExpress:A6QLV3 PANTHER:PTHR23155:SF38 Uniprot:A6QLV3
Length = 582
Score = 253 (94.1 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 70/290 (24%), Positives = 138/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ L L + FN+IT V +D +NL L +S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L +I ++ +DL +N++ + + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNELLDL------PDTIGNLSSLSRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L L L ++ N +
Sbjct: 294 NRLSAIPRSLAKCSALEELNLENNNISTL-PESLLSSLVKLNSLTLARNCFQLYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 79/301 (26%), Positives = 154/301 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L NR+ ++E + LSKL +L I +N+++ LP++I L +L +N++
Sbjct: 191 LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + T++ ++ N++ + D NL +L + L+ N+++++ SL+ + L
Sbjct: 251 EHLPKEIGNCTQITNLDLQHNELLDLP-DTIGNLSSLSRLGLRYNRLSAIPRSLAKCSAL 309
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++H
Sbjct: 310 EELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVG--GPSQF---STIYSLNMEH 364
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E +
Sbjct: 365 NRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DVS 422
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNST 299
L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 300 L 300
L
Sbjct: 483 L 483
Score = 240 (89.5 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 67/246 (27%), Positives = 131/246 (53%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+ + L + L++L L + N+L++LP+++ L +L + N +TSL
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L+KL+ L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PKEIGNCTQITNLDLQHNELLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + LSRL L +N+L I P +L+ L++ +N ++TL E+ + L L
Sbjct: 277 PDTIGNLSSLSRLGLRYNRLSAI-PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 225 (84.3 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 76/255 (29%), Positives = 127/255 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN- 59
L+ L+ L L NRL ++ L S L+ L +E N + LP + +L SL N
Sbjct: 283 LSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNC 342
Query: 60 -RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
++ + G + T + NM+ N+I + F L +++++NQ+TS+
Sbjct: 343 FQLYPVGGPSQFST-IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTW 401
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + L L+ NQLT+ + +D+ GL L + LS N + K G ++ + EL
Sbjct: 402 TSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKLP---HGLGNLR---KLRELD 454
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L E
Sbjct: 455 LEENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEI 513
Query: 239 KTFLPALEELFVSHN 253
T L LEEL+++ N
Sbjct: 514 GT-LENLEELYLNDN 527
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 45/133 (33%), Positives = 73/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L LG L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+T+L + LT L + N +T + +E L NL+ + L +N + S+ L+ +
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLPFELALCS 541
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 542 KLSIMSIENCPLS 554
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 66/238 (27%), Positives = 108/238 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L LN L L N + G S + L +E N++ +P I FS+ L L
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 387
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +L+ + L NN + + L
Sbjct: 388 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGLGN 446
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N++ T G + +TN+ L
Sbjct: 447 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLT---TLPRG---IGHLTNLTHL 499
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N + +L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 500 GLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 556
>UNIPROTKB|Q9UQ13 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9606 "Homo sapiens" [GO:0008543 "fibroblast growth factor
receptor signaling pathway" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0019888 "protein phosphatase regulator activity"
evidence=TAS] [GO:0019903 "protein phosphatase binding"
evidence=IDA] [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000164 "protein phosphatase type 1 complex"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 GO:GO:0008543 GO:GO:0007265
GO:GO:0019888 EMBL:CH471066 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:AL158163 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
CTD:8036 HOVERGEN:HBG055661 OMA:LPHGIGN OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:AF068920 EMBL:AF054828 EMBL:AB020669
EMBL:AK090820 EMBL:AK292833 EMBL:BC050445 IPI:IPI00298928
IPI:IPI00479890 RefSeq:NP_001255968.1 RefSeq:NP_031399.2
UniGene:Hs.104315 ProteinModelPortal:Q9UQ13 SMR:Q9UQ13
IntAct:Q9UQ13 STRING:Q9UQ13 PhosphoSite:Q9UQ13 DMDM:14423936
PaxDb:Q9UQ13 PeptideAtlas:Q9UQ13 PRIDE:Q9UQ13
Ensembl:ENST00000265277 Ensembl:ENST00000369452
Ensembl:ENST00000451838 GeneID:8036 KEGG:hsa:8036 UCSC:uc001kzl.4
UCSC:uc001kzn.3 GeneCards:GC10P112679 HGNC:HGNC:15454 HPA:HPA009164
MIM:602775 MIM:607721 neXtProt:NX_Q9UQ13 Orphanet:2701
PharmGKB:PA37960 InParanoid:Q9UQ13 PhylomeDB:Q9UQ13 ChiTaRS:SHOC2
GenomeRNAi:8036 NextBio:30623 Bgee:Q9UQ13 CleanEx:HS_SHOC2
Genevestigator:Q9UQ13 GermOnline:ENSG00000108061 Uniprot:Q9UQ13
Length = 582
Score = 253 (94.1 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 70/290 (24%), Positives = 138/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ L L + FN+IT V +D +NL L +S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L +I ++ +DL +N++ + + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNELLDL------PDTIGNLSSLSRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L L L ++ N +
Sbjct: 294 NRLSAIPRSLAKCSALEELNLENNNISTL-PESLLSSLVKLNSLTLARNCFQLYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 79/301 (26%), Positives = 154/301 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L NR+ ++E + LSKL +L I +N+++ LP++I L +L +N++
Sbjct: 191 LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + T++ ++ N++ + D NL +L + L+ N+++++ SL+ + L
Sbjct: 251 EHLPKEIGNCTQITNLDLQHNELLDLP-DTIGNLSSLSRLGLRYNRLSAIPRSLAKCSAL 309
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++H
Sbjct: 310 EELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVG--GPSQF---STIYSLNMEH 364
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E +
Sbjct: 365 NRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DVS 422
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNST 299
L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 300 L 300
L
Sbjct: 483 L 483
Score = 240 (89.5 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 67/246 (27%), Positives = 131/246 (53%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+ + L + L++L L + N+L++LP+++ L +L + N +TSL
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L+KL+ L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PKEIGNCTQITNLDLQHNELLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + LSRL L +N+L I P +L+ L++ +N ++TL E+ + L L
Sbjct: 277 PDTIGNLSSLSRLGLRYNRLSAI-PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 225 (84.3 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 76/255 (29%), Positives = 127/255 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN- 59
L+ L+ L L NRL ++ L S L+ L +E N + LP + +L SL N
Sbjct: 283 LSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNC 342
Query: 60 -RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
++ + G + T + NM+ N+I + F L +++++NQ+TS+
Sbjct: 343 FQLYPVGGPSQFST-IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTW 401
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + L L+ NQLT+ + +D+ GL L + LS N + K G ++ + EL
Sbjct: 402 TSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKLP---HGLGNLR---KLRELD 454
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L E
Sbjct: 455 LEENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEI 513
Query: 239 KTFLPALEELFVSHN 253
T L LEEL+++ N
Sbjct: 514 GT-LENLEELYLNDN 527
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 45/133 (33%), Positives = 73/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L LG L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+T+L + LT L + N +T + +E L NL+ + L +N + S+ L+ +
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLPFELALCS 541
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 542 KLSIMSIENCPLS 554
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 66/238 (27%), Positives = 108/238 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L LN L L N + G S + L +E N++ +P I FS+ L L
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 387
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +L+ + L NN + + L
Sbjct: 388 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGLGN 446
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N++ T G + +TN+ L
Sbjct: 447 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLT---TLPRG---IGHLTNLTHL 499
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N + +L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 500 GLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 556
>UNIPROTKB|F2Z5G0 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:CT737336 RefSeq:XP_001927528.1
UniGene:Ssc.83770 ProteinModelPortal:F2Z5G0 SMR:F2Z5G0 PRIDE:F2Z5G0
Ensembl:ENSSSCT00000011624 GeneID:100155918 KEGG:ssc:100155918
Uniprot:F2Z5G0
Length = 582
Score = 253 (94.1 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 70/290 (24%), Positives = 138/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ L L + FN+IT V +D +NL L +S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L +I ++ +DL +N++ + + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNELLDL------PDTIGNLSSLSRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L L L ++ N +
Sbjct: 294 NRLSAIPRSLAKCSALEELNLENNNISTL-PESLLSSLVKLNSLTLARNCFQLYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 79/301 (26%), Positives = 154/301 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L NR+ ++E + LSKL +L I +N+++ LP++I L +L +N++
Sbjct: 191 LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + T++ ++ N++ + D NL +L + L+ N+++++ SL+ + L
Sbjct: 251 EHLPKEIGNCTQITNLDLQHNELLDLP-DTIGNLSSLSRLGLRYNRLSAIPRSLAKCSAL 309
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++H
Sbjct: 310 EELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVG--GPSQF---STIYSLNMEH 364
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E +
Sbjct: 365 NRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DVS 422
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNST 299
L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 300 L 300
L
Sbjct: 483 L 483
Score = 240 (89.5 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 67/246 (27%), Positives = 131/246 (53%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+ + L + L++L L + N+L++LP+++ L +L + N +TSL
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L+KL+ L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PKEIGNCTQITNLDLQHNELLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + LSRL L +N+L I P +L+ L++ +N ++TL E+ + L L
Sbjct: 277 PDTIGNLSSLSRLGLRYNRLSAI-PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 225 (84.3 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 76/255 (29%), Positives = 127/255 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN- 59
L+ L+ L L NRL ++ L S L+ L +E N + LP + +L SL N
Sbjct: 283 LSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNC 342
Query: 60 -RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
++ + G + T + NM+ N+I + F L +++++NQ+TS+
Sbjct: 343 FQLYPVGGPSQFST-IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTW 401
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + L L+ NQLT+ + +D+ GL L + LS N + K G ++ + EL
Sbjct: 402 TSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKLP---HGLGNLR---KLRELD 454
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L E
Sbjct: 455 LEENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEI 513
Query: 239 KTFLPALEELFVSHN 253
T L LEEL+++ N
Sbjct: 514 GT-LENLEELYLNDN 527
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 45/133 (33%), Positives = 73/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L LG L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+T+L + LT L + N +T + +E L NL+ + L +N + S+ L+ +
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLPFELALCS 541
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 542 KLSIMSIENCPLS 554
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 66/238 (27%), Positives = 108/238 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L LN L L N + G S + L +E N++ +P I FS+ L L
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 387
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +L+ + L NN + + L
Sbjct: 388 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGLGN 446
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N++ T G + +TN+ L
Sbjct: 447 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLT---TLPRG---IGHLTNLTHL 499
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N + +L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 500 GLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 556
>UNIPROTKB|Q5RAV5 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9601 "Pongo abelii" [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 CTD:8036
HOVERGEN:HBG055661 OMA:LPHGIGN PANTHER:PTHR23155:SF38 EMBL:CR858906
EMBL:CR860532 EMBL:CR860795 EMBL:CR861437 RefSeq:NP_001126707.1
RefSeq:NP_001128872.1 UniGene:Pab.17963 UniGene:Pab.19685
ProteinModelPortal:Q5RAV5 SMR:Q5RAV5 PRIDE:Q5RAV5
Ensembl:ENSPPYT00000003192 GeneID:100173707 GeneID:100189801
KEGG:pon:100173707 KEGG:pon:100189801 InParanoid:Q5R5R1
Uniprot:Q5RAV5
Length = 582
Score = 253 (94.1 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 70/290 (24%), Positives = 138/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ L L + FN+IT V +D +NL L +S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L +I ++ +DL +N++ + + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNELLDL------PDTIGNLSSLSRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L L L ++ N +
Sbjct: 294 NRLSAIPRSLAKCSALEELNLENNNISTL-PESLLSSLVKLNSLTLARNCFQLYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 79/301 (26%), Positives = 154/301 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L NR+ ++E + LSKL +L I +N+++ LP++I L +L +N++
Sbjct: 191 LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + T++ ++ N++ + D NL +L + L+ N+++++ SL+ + L
Sbjct: 251 EHLPKEIGNCTQITNLDLQHNELLDLP-DTIGNLSSLSRLGLRYNRLSAIPRSLAKCSAL 309
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++H
Sbjct: 310 EELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVG--GPSQF---STIYSLNMEH 364
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E +
Sbjct: 365 NRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DVS 422
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNST 299
L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 300 L 300
L
Sbjct: 483 L 483
Score = 240 (89.5 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 67/246 (27%), Positives = 131/246 (53%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+ + L + L++L L + N+L++LP+++ L +L + N +TSL
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L+KL+ L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PKEIGNCTQITNLDLQHNELLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + LSRL L +N+L I P +L+ L++ +N ++TL E+ + L L
Sbjct: 277 PDTIGNLSSLSRLGLRYNRLSAI-PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 225 (84.3 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 76/255 (29%), Positives = 127/255 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN- 59
L+ L+ L L NRL ++ L S L+ L +E N + LP + +L SL N
Sbjct: 283 LSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNC 342
Query: 60 -RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
++ + G + T + NM+ N+I + F L +++++NQ+TS+
Sbjct: 343 FQLYPVGGPSQFST-IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTW 401
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + L L+ NQLT+ + +D+ GL L + LS N + K G ++ + EL
Sbjct: 402 TSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKLP---HGLGNLR---KLRELD 454
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L E
Sbjct: 455 LEENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEI 513
Query: 239 KTFLPALEELFVSHN 253
T L LEEL+++ N
Sbjct: 514 GT-LENLEELYLNDN 527
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 45/133 (33%), Positives = 73/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L LG L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+T+L + LT L + N +T + +E L NL+ + L +N + S+ L+ +
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLPFELALCS 541
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 542 KLSIMSIENCPLS 554
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 66/238 (27%), Positives = 108/238 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L LN L L N + G S + L +E N++ +P I FS+ L L
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 387
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +L+ + L NN + + L
Sbjct: 388 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGLGN 446
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N++ T G + +TN+ L
Sbjct: 447 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLT---TLPRG---IGHLTNLTHL 499
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N + +L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 500 GLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 556
>MGI|MGI:2442313 [details] [associations]
symbol:Lrrc1 "leucine rich repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2442313 GO:GO:0005737 GO:GO:0016020 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000116557 CTD:55227 HOVERGEN:HBG052357 OrthoDB:EOG498V0J
EMBL:AK051043 EMBL:AK082721 EMBL:AK147075 EMBL:BC046591
EMBL:BC087542 IPI:IPI00267845 IPI:IPI00453515 IPI:IPI00469577
RefSeq:NP_001139520.1 RefSeq:NP_766116.3 UniGene:Mm.28534
UniGene:Mm.482664 ProteinModelPortal:Q80VQ1 SMR:Q80VQ1
STRING:Q80VQ1 PhosphoSite:Q80VQ1 PaxDb:Q80VQ1 PRIDE:Q80VQ1
GeneID:214345 KEGG:mmu:214345 InParanoid:Q80VQ1 NextBio:374274
CleanEx:MM_LRRC1 Genevestigator:Q80VQ1
GermOnline:ENSMUSG00000032352 Uniprot:Q80VQ1
Length = 524
Score = 252 (93.8 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 82/274 (29%), Positives = 130/274 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L L+ N+L+ L Q L KL+ L + N+++ LP +I F QL L + N I +
Sbjct: 38 LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
+ LQV + N +T + + F L NL +S+ + + S+ ++ L LA L
Sbjct: 98 PESIAFCKALQVADFSGNPLTRLP-ESFPELQNLTCLSVNDISLQSLPENIGNLYNLASL 156
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N LT +L D + L+RL +DL N+I + + ++ +L L N++
Sbjct: 157 ELRENLLT-YLPDSLTQLRRLEELDLGNNEIYNL------PESIGALLHLKDLWLDGNQL 209
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
L + + L LD+S N+L + P++ GL SL L IS NLL T+ E L
Sbjct: 210 SELPQEIGNLKNLLCLDVSENRLERL-PEEISGLTSLTYLVISQNLLETIPEGIGK-LKK 267
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
L L + N LT+L + L + L N +
Sbjct: 268 LSILKLDQNRLTQLPEAIGDCENLTELVLTENRL 301
Score = 227 (85.0 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 79/258 (30%), Positives = 122/258 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L +N+ L+SL +G L L L + +N L LP + +L L NN I
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEI 186
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+L + L L+ +D NQ++ + + E NL NL + + N++ + +SGLT L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQLSELPQ-EIGNLKNLLCLDVSENRLERLPEEISGLTSL 245
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
YL +S N L E + + I LK+L + L N++ + + N+ EL L
Sbjct: 246 TYLVISQN-LLETIPEGIGKLKKLSILKLDQNRLTQL------PEAIGDCENLTELVLTE 298
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE-ETSKT 240
N + L ++ + LS L+ NKL ++ P + G SL M I N LT L E S+
Sbjct: 299 NRLLTLPKSIGKLKKLSNLNADRNKLVSL-PKEIGGCCSLTMFCIRDNRLTRLPAEVSQA 357
Query: 241 FLPALEELFVSHNSLTRL 258
L L V+ N L L
Sbjct: 358 V--ELHVLDVAGNRLHHL 373
Score = 153 (58.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 52/205 (25%), Positives = 95/205 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L+ N+L L ++G L L L + +N+LE LP +I + L L + N +
Sbjct: 196 LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLL 255
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
++ + L KL + +D N++T + + + NL + L N++ ++ S+ L KL
Sbjct: 256 ETIPEGIGKLKKLSILKLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPKSIGKLKKL 314
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+ L N+L L +I G L + N++ + +V + L +
Sbjct: 315 SNLNADRNKLVS-LPKEIGGCCSLTMFCIRDNRLTRLPA------EVSQAVELHVLDVAG 367
Query: 182 NEIENLDGALMGIHGLSRLDLSHNK 206
N + +L +L + L L LS N+
Sbjct: 368 NRLHHLPLSLTTLK-LKALWLSDNQ 391
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 45/154 (29%), Positives = 80/154 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GLT L +L ++ N L+++ +G L KL +L ++QN+L LP I L L NR
Sbjct: 241 GLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR 300
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ +L + L KL N D N++ + + E +L +++N++T + + +S +
Sbjct: 301 LLTLPKSIGKLKKLSNLNADRNKLVSLPK-EIGGCCSLTMFCIRDNRLTRLPAEVSQAVE 359
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L L ++ N+L L + LK L+ + LS N+
Sbjct: 360 LHVLDVAGNRLHHLPLS-LTTLK-LKALWLSDNQ 391
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 59/228 (25%), Positives = 98/228 (42%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L L NN + +L +G L L+ L ++ NQL LP +I L L + NR+
Sbjct: 173 LRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRL 232
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + GLT L + N + + + L L + L N++T + ++ L
Sbjct: 233 ERLPEEISGLTSLTYLVISQNLLETIP-EGIGKLKKLSILKLDQNRLTQLPEAIGDCENL 291
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L+ N+L L I LK+L ++ NK+ ++ G ++ ++
Sbjct: 292 TELVLTENRLLT-LPKSIGKLKKLSNLNADRNKLVSL------PKEIGGCCSLTMFCIRD 344
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
N + L + L LD++ N+L + P L LK L +S N
Sbjct: 345 NRLTRLPAEVSQAVELHVLDVAGNRLHHL-PLSLTTL-KLKALWLSDN 390
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 251 (93.4 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 104/345 (30%), Positives = 168/345 (48%)
Query: 8 LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITS 63
+FLN LKS+ G+ L +L+ L I N + + DIQ FS L +L NNN+++
Sbjct: 79 VFLNG-MLKSVSGEAFERLVELRELEISGN-ICWMSLDIQTFSSLTNLTRLLLNNNKLSG 136
Query: 64 LD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKL 121
+D GL L +L++ + N ++ + FQ LH L + L NQI+S+++ L ++L
Sbjct: 137 VDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSEL 196
Query: 122 AYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L N++ L D I L L+ ++L N I G T I L+
Sbjct: 197 RVLSLQANKIPN-LPDGIFTHLDHLQELNLRSNLIRVL---TPGSFPASLKTLI----LK 248
Query: 181 HNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N +E L A+ +H ++ LDLS N L + D F L SL+ LD+S N ++TL +
Sbjct: 249 KNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVF 308
Query: 240 TFLPALEELFVSHNSLTRLD----KDFHGLPVLCKADLAHNNIKAINIQLA--LKTQCQI 293
L +++ +++ NSL +D KD H L +L DL++N++++I L QC +
Sbjct: 309 KGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLL---DLSNNSLRSIPSGFFEDLDFQC-V 364
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQ 338
F L GNP CD + D ++ + + K C+
Sbjct: 365 FELR--------GNPWSCDCGIHYFYDWLKYNHKHVKDLSRVSCE 401
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 66/239 (27%), Positives = 116/239 (48%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
LT+L L LNNN+L ++ G +L +L++L + N L L + Q +L L + N
Sbjct: 121 LTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFN 180
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+I+SL L + ++L+V ++ N+I + F +L +L ++L++N I + S
Sbjct: 181 QISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPG-SFP 239
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L L N L + L + +DLS N + + + Q + ++ L
Sbjct: 240 ASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPA-----DLFQNLISLETLD 294
Query: 179 LQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDS--LKMLDISHNLLTTL 234
L N I L G++ G+ + + L N L IS D + D L++LD+S+N L ++
Sbjct: 295 LSENRISTLAGSVFKGLFSIKSVYLQKNSL--ISVDAHLLKDQHDLQLLDLSNNSLRSI 351
>RGD|1308146 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C. elegans)"
species:10116 "Rattus norvegicus" [GO:0000164 "protein phosphatase
type 1 complex" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0019903 "protein phosphatase binding" evidence=IEA;ISO;ISS]
[GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA;ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 RGD:1308146 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 HOVERGEN:HBG055661 OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:BC079032 IPI:IPI00464721
RefSeq:NP_001013173.1 UniGene:Rn.156055 ProteinModelPortal:Q6AYI5
PRIDE:Q6AYI5 GeneID:309548 KEGG:rno:309548 UCSC:RGD:1308146
InParanoid:Q6AYI5 NextBio:660958 ArrayExpress:Q6AYI5
Genevestigator:Q6AYI5 Uniprot:Q6AYI5
Length = 582
Score = 252 (93.8 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 70/290 (24%), Positives = 139/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ L L + FN+IT V +D +NL L ++S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLDSLTTLYLRFNRITAVEKD-VRNLPRLSTLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L +I ++ +DL +N++ + + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNELLDL------PDTIGNLSSLNRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L L L ++ N +
Sbjct: 294 NRLSAIPRSLAKCSALEELNLENNNISTL-PESLLSSLVKLNSLTLARNCFQLYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 77/301 (25%), Positives = 153/301 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L NR+ ++E + L +L L I +N+++ LP++I L +L +N++
Sbjct: 191 LDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + T++ ++ N++ + D NL +L+ + L+ N+++++ SL+ + L
Sbjct: 251 EHLPKEIGNCTQITNLDLQHNELLDLP-DTIGNLSSLNRLGLRYNRLSAIPRSLAKCSAL 309
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++H
Sbjct: 310 EELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVG--GPSQF---STIYSLNMEH 364
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E +
Sbjct: 365 NRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DVS 422
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNST 299
L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 300 L 300
L
Sbjct: 483 L 483
Score = 230 (86.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 77/255 (30%), Positives = 127/255 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN- 59
L+ LN L L NRL ++ L S L+ L +E N + LP + +L SL N
Sbjct: 283 LSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNC 342
Query: 60 -RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
++ + G + T + NM+ N+I + F L +++++NQ+TS+
Sbjct: 343 FQLYPVGGPSQFST-IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTW 401
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + L L+ NQLT+ + +D+ GL L + LS N + K G ++ + EL
Sbjct: 402 TSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKLP---HGLGNLR---KLRELD 454
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L E
Sbjct: 455 LEENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEI 513
Query: 239 KTFLPALEELFVSHN 253
T L LEEL+++ N
Sbjct: 514 GT-LENLEELYLNDN 527
Score = 226 (84.6 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 65/246 (26%), Positives = 130/246 (52%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+ + L + L++L L + N+L++LP+++ L +L + N +TSL
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L +L+ L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PKEIGNCTQITNLDLQHNELLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + L+RL L +N+L I P +L+ L++ +N ++TL E+ + L L
Sbjct: 277 PDTIGNLSSLNRLGLRYNRLSAI-PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 45/133 (33%), Positives = 73/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L LG L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+T+L + LT L + N +T + +E L NL+ + L +N + S+ L+ +
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLPFELALCS 541
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 542 KLSIMSIENCPLS 554
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 40/124 (32%), Positives = 62/124 (50%)
Query: 167 QVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
+V + N+ L L N + +L +L + L LDL HNKLR I P LDSL L +
Sbjct: 141 EVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREI-PSVVYRLDSLTTLYL 199
Query: 227 SHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA 286
N +T +E+ + LP L L + N + +L + L L D+AHN ++ + ++
Sbjct: 200 RFNRITAVEKDVRN-LPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIG 258
Query: 287 LKTQ 290
TQ
Sbjct: 259 NCTQ 262
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 66/238 (27%), Positives = 108/238 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L LN L L N + G S + L +E N++ +P I FS+ L L
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 387
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +L+ + L NN + + L
Sbjct: 388 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGLGN 446
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N++ T G + +TN+ L
Sbjct: 447 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLT---TLPRG---IGHLTNLTHL 499
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N + +L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 500 GLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 556
>UNIPROTKB|Q9BTT6 [details] [associations]
symbol:LRRC1 "Leucine-rich repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737 EMBL:CH471081
GO:GO:0016020 eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000116557 EMBL:AF359380 EMBL:AF332199 EMBL:AK021896
EMBL:AK001637 EMBL:AL513211 EMBL:AL033384 EMBL:BC003193
IPI:IPI00427739 IPI:IPI00427741 RefSeq:NP_060684.4
UniGene:Hs.646997 UniGene:Hs.732252 ProteinModelPortal:Q9BTT6
SMR:Q9BTT6 IntAct:Q9BTT6 MINT:MINT-1423850 STRING:Q9BTT6
PhosphoSite:Q9BTT6 DMDM:50401149 PaxDb:Q9BTT6 PeptideAtlas:Q9BTT6
PRIDE:Q9BTT6 DNASU:55227 Ensembl:ENST00000370888
Ensembl:ENST00000487251 GeneID:55227 KEGG:hsa:55227 UCSC:uc003pcd.1
CTD:55227 GeneCards:GC06P053706 HGNC:HGNC:14307 HPA:HPA031602
HPA:HPA031603 HPA:HPA031604 MIM:608195 neXtProt:NX_Q9BTT6
PharmGKB:PA30460 HOVERGEN:HBG052357 InParanoid:Q9BTT6 OMA:FQTDTDH
OrthoDB:EOG498V0J PhylomeDB:Q9BTT6 GenomeRNAi:55227 NextBio:59224
ArrayExpress:Q9BTT6 Bgee:Q9BTT6 CleanEx:HS_LRRC1
Genevestigator:Q9BTT6 GermOnline:ENSG00000137269 Uniprot:Q9BTT6
Length = 524
Score = 251 (93.4 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 82/274 (29%), Positives = 130/274 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L L+ N+L+ L Q L KL+ L + N+++ LP +I F QL L + N I +
Sbjct: 38 LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
+ LQV + N +T + + F L NL +S+ + + S+ ++ L LA L
Sbjct: 98 PESISFCKALQVADFSGNPLTRLP-ESFPELQNLTCLSVNDISLQSLPENIGNLYNLASL 156
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N LT +L D + L+RL +DL N+I + + ++ +L L N++
Sbjct: 157 ELRENLLT-YLPDSLTQLRRLEELDLGNNEIYNL------PESIGALLHLKDLWLDGNQL 209
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
L + + L LD+S N+L + P++ GL SL L IS NLL T+ + L
Sbjct: 210 SELPQEIGNLKNLLCLDVSENRLERL-PEEISGLTSLTDLVISQNLLETIPDGIGK-LKK 267
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
L L V N LT+L + L + L N +
Sbjct: 268 LSILKVDQNRLTQLPEAVGECESLTELVLTENQL 301
Score = 215 (80.7 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 76/258 (29%), Positives = 124/258 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L +N+ L+SL +G L L L + +N L LP + +L L NN I
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEI 186
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+L + L L+ +D NQ++ + + E NL NL + + N++ + +SGLT L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQLSELPQ-EIGNLKNLLCLDVSENRLERLPEEISGLTSL 245
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L +S N L E + D I LK+L + + N++ + E + + +T EL L
Sbjct: 246 TDLVISQN-LLETIPDGIGKLKKLSILKVDQNRLTQLP---EAVGECESLT---ELVLTE 298
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE-ETSKT 240
N++ L ++ + LS L+ NKL ++ P + G SL + + N LT + E S+
Sbjct: 299 NQLLTLPKSIGKLKKLSNLNADRNKLVSL-PKEIGGCCSLTVFCVRDNRLTRIPAEVSQA 357
Query: 241 FLPALEELFVSHNSLTRL 258
L L V+ N L L
Sbjct: 358 --TELHVLDVAGNRLLHL 373
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 55/206 (26%), Positives = 98/206 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L+ N+L L ++G L L L + +N+LE LP +I + L L + N +
Sbjct: 196 LLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLL 255
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
++ DG+ + L KL + +D N++T + + +L + L NQ+ ++ S+ L K
Sbjct: 256 ETIPDGIGK-LKKLSILKVDQNRLTQLP-EAVGECESLTELVLTENQLLTLPKSIGKLKK 313
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L+ L N+L L +I G L + N++ + +V T + L +
Sbjct: 314 LSNLNADRNKLVS-LPKEIGGCCSLTVFCVRDNRLTRIPA------EVSQATELHVLDVA 366
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNK 206
N + +L +L + L L LS N+
Sbjct: 367 GNRLLHLPLSLTALK-LKALWLSDNQ 391
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 44/154 (28%), Positives = 80/154 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GLT L L ++ N L+++ +G L KL +L ++QN+L LP + L L N+
Sbjct: 241 GLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQ 300
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ +L + L KL N D N++ + + E +L +++N++T + + +S T+
Sbjct: 301 LLTLPKSIGKLKKLSNLNADRNKLVSLPK-EIGGCCSLTVFCVRDNRLTRIPAEVSQATE 359
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L L ++ N+L L + LK L+ + LS N+
Sbjct: 360 LHVLDVAGNRLLHLPLS-LTALK-LKALWLSDNQ 391
>MGI|MGI:3045299 [details] [associations]
symbol:Lrrd1 "leucine rich repeats and death domain
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS50017 PROSITE:PS51450
MGI:MGI:3045299 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 HSSP:P25147 UniGene:Mm.482273
GeneTree:ENSGT00700000104287 CTD:401387 HOVERGEN:HBG108705
OrthoDB:EOG4K6G5V EMBL:AK029981 EMBL:BC141026 EMBL:BC145170
IPI:IPI00223958 RefSeq:NP_766467.2 ProteinModelPortal:Q8C0R9
SMR:Q8C0R9 PhosphoSite:Q8C0R9 PRIDE:Q8C0R9
Ensembl:ENSMUST00000044039 GeneID:242838 KEGG:mmu:242838
HOGENOM:HOG000060227 InParanoid:B2RU96 OMA:HTIACYL NextBio:385582
Bgee:Q8C0R9 CleanEx:MM_4932412H11RIK Genevestigator:Q8C0R9
Uniprot:Q8C0R9
Length = 853
Score = 254 (94.5 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 81/304 (26%), Positives = 151/304 (49%)
Query: 5 LNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
+ +L+L+ N++K+ +G G L L++L +++N L ++P +IQLF L L A+ N I+
Sbjct: 160 VKYLYLDKNQIKNFQGIDPGDLLGLEILSLQENGLSSIPLEIQLFHNLKILNASYNEISQ 219
Query: 64 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 123
+ L L ++ ++ N I + ++L L+++SL N +T + SLS L L
Sbjct: 220 IPKELLQLENMRQLLLNSNHIDTLPSG-LEHLRYLETLSLGKNMLTYIPDSLSSLKNLRI 278
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L +NQLT F + L +L +++L+ N I +V+ + N+ L + HN+
Sbjct: 279 LNLEYNQLTIFS-KSLCFLPKLNSLNLTGNMIGSL------PKEVRELKNLESLLMDHNK 331
Query: 184 IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
+ L + + + L L+ NKL ISP L++L++ NLL ++ + +
Sbjct: 332 LTFLAVEIFQLPKIKELHLADNKLEAISPK-IENFKELRLLNLDKNLLQSIPKKISHCVN 390
Query: 244 ALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQI--FGLNSTLR 301
LE L +S N++ L K L L + + N + + +++ + I F N
Sbjct: 391 -LESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITH 449
Query: 302 IYLE 305
+ +E
Sbjct: 450 VPIE 453
Score = 235 (87.8 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 79/335 (23%), Positives = 149/335 (44%)
Query: 4 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
+L L + N + + +L L ++ L++ N ++ LPS ++ L +L N +T
Sbjct: 206 NLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTY 265
Query: 64 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 123
+ L L L++ N+++NQ+T+ + L L+S++L N I S+ + L L
Sbjct: 266 IPDSLSSLKNLRILNLEYNQLTIFSKS-LCFLPKLNSLNLTGNMIGSLPKEVRELKNLES 324
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L + HN+LT FL +I L +++ + L+ NK+ + E +++ L L N
Sbjct: 325 LLMDHNKLT-FLAVEIFQLPKIKELHLADNKLEAISPKIENFKELR------LLNLDKNL 377
Query: 184 IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN-LLTTLEETSKTFL 242
++++ + L L LS N + + P L +L+ L ++ N ++T EE S L
Sbjct: 378 LQSIPKKISHCVNLESLSLSDNNIEEL-PKKIRKLKNLRQLHVNRNKMITMTEEISH--L 434
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRI 302
+ L S N +T + + + + +L +NNI + L N
Sbjct: 435 SNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGN--- 491
Query: 303 YLEGNPVLCDDSMRAVIDAMETINNNTKIHGETIC 337
Y+ PV D S + +E N + + +C
Sbjct: 492 YISEIPV--DMSFSKQLLHLELNRNKLTVFSKHLC 524
Score = 217 (81.4 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 76/311 (24%), Positives = 143/311 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L++++ L + N++ + ++ K+ + + N + P + L L N N I
Sbjct: 434 LSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYI 493
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ + + +L ++ N++T+ + +L NL+ + L NQI ++ S +S + L
Sbjct: 494 SEIPVDMSFSKQLLHLELNRNKLTVFSK-HLCSLTNLEYLDLAKNQIMTIPSCISAMVSL 552
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N+ F ++ LK LR +D+S NK+ K ++ + I +L L +
Sbjct: 553 HVLILSDNKFESFP-KELCSLKNLRVLDISENKLQKIPL------EISKLKRIQKLNLSN 605
Query: 182 NEIENLDGALMGIHGLSRLDLSHN--KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N N L + L L++S K T P++ + LK+L+IS+N + + +
Sbjct: 606 NIFTNFPVELCQLQTLEELNISQTSGKKLTRLPEEVSHMTQLKILNISNNAIKDIPKNIG 665
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNST 299
L +L + S+N ++ L F L VL DL NN+ A+ I+ L+S
Sbjct: 666 E-LRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTAL--------PSGIYKLSSL 716
Query: 300 LRIYLEGNPVL 310
I + NP++
Sbjct: 717 KEINFDDNPLM 727
Score = 214 (80.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 71/284 (25%), Positives = 132/284 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L L N L S+ ++ L++L N++ +P ++ + L N+N I
Sbjct: 181 LLGLEILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHI 240
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+L L L L+ ++ N +T + D +L NL ++L+ NQ+T + SL L KL
Sbjct: 241 DTLPSGLEHLRYLETLSLGKNMLTYIP-DSLSSLKNLRILNLEYNQLTIFSKSLCFLPKL 299
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L+ N + L ++R LK L ++ + +NK+ ++ + I EL L
Sbjct: 300 NSLNLTGNMIGS-LPKEVRELKNLESLLMDHNKLTFLAV------EIFQLPKIKELHLAD 352
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N++E + + L L+L N L++I P +L+ L +S N + L + +
Sbjct: 353 NKLEAISPKIENFKELRLLNLDKNLLQSI-PKKISHCVNLESLSLSDNNIEELPKKIRK- 410
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQL 285
L L +L V+ N + + ++ L + + + N I + I++
Sbjct: 411 LKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIEI 454
Score = 207 (77.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 80/318 (25%), Positives = 155/318 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L + L L +N+L+++ ++ +L+LL +++N L+++P I L SL ++N I
Sbjct: 342 LPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNI 401
Query: 62 TSLDGLLRGLTKLQVFNMDFNQ-ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
L +R L L+ +++ N+ ITM +E +L N+ + NQIT + + K
Sbjct: 402 EELPKKIRKLKNLRQLHVNRNKMITMT--EEISHLSNIHILEFSGNQITHVPIEIKNCRK 459
Query: 121 LAYLYLSHNQLTEFL--LDDIRGLKRLR---------TVDLSYNK--INKFGTRNE---G 164
+ + L++N + F L ++ L L VD+S++K ++ RN+
Sbjct: 460 ITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVF 519
Query: 165 KNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
+ +TN+ L L N+I + + + L L LS NK + P + L +L++L
Sbjct: 520 SKHLCSLTNLEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESF-PKELCSLKNLRVL 578
Query: 225 DISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI 283
DIS N L + E SK L +++L +S+N T + L L + +++ + K +
Sbjct: 579 DISENKLQKIPLEISK--LKRIQKLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTR 636
Query: 284 ---QLALKTQCQIFGLNS 298
+++ TQ +I +++
Sbjct: 637 LPEEVSHMTQLKILNISN 654
Score = 194 (73.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 69/316 (21%), Positives = 144/316 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L LN L L N + SL ++ L L+ L+++ N+L L +I ++ L+ +N++
Sbjct: 296 LPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKL 355
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
++ + +L++ N+D N + + + + + NL+S+SL +N I + + L L
Sbjct: 356 EAISPKIENFKELRLLNLDKNLLQSIPK-KISHCVNLESLSLSDNNIEELPKKIRKLKNL 414
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG---------TRNE-GKNQVQ-- 169
L+++ N++ + ++I L + ++ S N+I TR E N +
Sbjct: 415 RQLHVNRNKMIT-MTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYF 473
Query: 170 -----GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
+ ++ L N I + + L L+L+ NKL T+ L +L+ L
Sbjct: 474 PVGLCALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKL-TVFSKHLCSLTNLEYL 532
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQ 284
D++ N + T+ + +L L +S N K+ L L D++ N ++ I ++
Sbjct: 533 DLAKNQIMTIPSCISAMV-SLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLE 591
Query: 285 LALKTQCQIFGLNSTL 300
++ + Q L++ +
Sbjct: 592 ISKLKRIQKLNLSNNI 607
Score = 191 (72.3 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 74/294 (25%), Positives = 126/294 (42%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L L N L + L +L L++L +E NQL + +L SL N I SL
Sbjct: 253 LETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSL 312
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
+R L L+ MD N++T + + FQ L + + L +N++ +++ + +L L
Sbjct: 313 PKEVRELKNLESLLMDHNKLTFLAVEIFQ-LPKIKELHLADNKLEAISPKIENFKELRLL 371
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR------------NEGK-----NQ 167
L N L + + I L ++ LS N I + + N K +
Sbjct: 372 NLDKN-LLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEE 430
Query: 168 VQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDIS 227
+ ++NI L+ N+I ++ + ++R++L++N + P L SL L +
Sbjct: 431 ISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYF-PVGLCALQSLDYLSFN 489
Query: 228 HNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
N ++ + +F L L ++ N LT K L L DLA N I I
Sbjct: 490 GNYISEIP-VDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTI 542
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 60/251 (23%), Positives = 118/251 (47%)
Query: 33 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG-LTKLQVFNMDFNQITMVRRDE 91
++ L+ P DI + LY + N+I + G+ G L L++ ++ N ++ + E
Sbjct: 142 LDAKGLQEFPVDIVKVKYVKYLYLDKNQIKNFQGIDPGDLLGLEILSLQENGLSSIPL-E 200
Query: 92 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
Q HNL ++ N+I+ + L L + L L+ N + + L + L+ L T+ L
Sbjct: 201 IQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHI-DTLPSGLEHLRYLETLSLG 259
Query: 152 YNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
N + + + + N+ L L++N++ +L + L+ L+L+ N + ++
Sbjct: 260 KNMLTYI------PDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSL- 312
Query: 212 PDDFIGLDSLKMLDISHNLLTTLEETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCK 270
P + L +L+ L + HN LT L + F LP ++EL ++ N L + L
Sbjct: 313 PKEVRELKNLESLLMDHNKLTFL--AVEIFQLPKIKELHLADNKLEAISPKIENFKELRL 370
Query: 271 ADLAHNNIKAI 281
+L N +++I
Sbjct: 371 LNLDKNLLQSI 381
>UNIPROTKB|Q5F4C4 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0000164 "protein phosphatase
type 1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 PANTHER:PTHR23155:SF38 EMBL:AJ851376
IPI:IPI00600917 RefSeq:NP_001026407.1 UniGene:Gga.42449
ProteinModelPortal:Q5F4C4 GeneID:423894 KEGG:gga:423894
NextBio:20826295 Uniprot:Q5F4C4
Length = 529
Score = 250 (93.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 70/290 (24%), Positives = 139/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ LT L + FN+IT V +D + L L +S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLTSLATLYLRFNRITTVEKD-IKTLSKLTMLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L ++I ++ +DL +N++ + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPEEIGSCTQITNLDLQHNELLDL------PETIGNLSSLSRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L L L ++ N + +
Sbjct: 294 NRLSAIPKSLAKCSELDELNLENNNISTL-PEGLLSSLVKLTSLTLARNCFQSYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 249 (92.7 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 83/302 (27%), Positives = 156/302 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L NR+ ++E + TLSKL +L I +N+++ LP++I L +L +N++
Sbjct: 191 LTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDE-FQNLHNLDSISLQNNQITSMNSSLSGLTK 120
L + T Q+ N+D ++ E NL +L + L+ N+++++ SL+ ++
Sbjct: 251 EHLPEEIGSCT--QITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSE 308
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++
Sbjct: 309 LDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVG--GPSQF---STIYSLNME 363
Query: 181 HNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
HN I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DV 421
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNS 298
+ L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 481
Query: 299 TL 300
L
Sbjct: 482 QL 483
Score = 248 (92.4 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 81/303 (26%), Positives = 145/303 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L+ N L SL L L KL++L + N+L +PS + + L +LY NRI
Sbjct: 145 LVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRI 204
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T+++ ++ L+KL + ++ N+I + E L NL ++ + +NQ+ + + T++
Sbjct: 205 TTVEKDIKTLSKLTMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPEEIGSCTQI 263
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L HN+L + L + I L L + L YN+++ + + + EL L++
Sbjct: 264 TNLDLQHNELLD-LPETIGNLSSLSRLGLRYNRLSAI------PKSLAKCSELDELNLEN 316
Query: 182 NEIENL-DGALMGIHGLSRLDLSHNKLRTI---SPDDFIGLDSLKMLDISHNLLTTLEET 237
N I L +G L + L+ L L+ N ++ P F + SL M HN + +
Sbjct: 317 NNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNM---EHNRINKIPFG 373
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
+ L +L + N LT L DF + + +LA N + I ++ ++ L+
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILS 433
Query: 298 STL 300
+ L
Sbjct: 434 NNL 436
Score = 224 (83.9 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 67/246 (27%), Positives = 126/246 (51%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L + L + L++L L + N+L++LP+++ L +L + N +TSL
Sbjct: 105 LDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L+KL L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LTSLATLYLRFNRITTVEKDIKTLSKLTMLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PEEIGSCTQITNLDLQHNELLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + LSRL L +N+L I P L L++ +N ++TL E + L L
Sbjct: 277 PETIGNLSSLSRLGLRYNRLSAI-PKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 208 (78.3 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 70/241 (29%), Positives = 116/241 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNR 60
L+ L+ L L NRL ++ L S+L L +E N + LP + +L SL N
Sbjct: 283 LSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNC 342
Query: 61 ITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
S G + + NM+ N+I + F L +++++NQ+TS+ T
Sbjct: 343 FQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
+ L L+ NQLT+ + +D+ GL L + LS N + K + + + + EL L
Sbjct: 403 SMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL------PHGIGNLRKLRELDL 455
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-EETS 238
+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L EE
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEIG 514
Query: 239 K 239
K
Sbjct: 515 K 515
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L +G L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQIT 85
+T+L + LT L + N +T
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLT 507
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 252 (93.8 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 89/328 (27%), Positives = 159/328 (48%)
Query: 4 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRIT 62
+ ++ L NR+++LE L KL++L + QN +E L S + + S+L +L + N ++
Sbjct: 74 ETKYINLTVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVS 133
Query: 63 SLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTK 120
SL +GLT L + ++ FN+I V +L +L + L NN I S+ + G+
Sbjct: 134 SLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNT 193
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L +N+L + ++ L L+++D+S N + +F RN+ +G+ + L +Q
Sbjct: 194 LEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLV-EF-VRNDS---FEGLKELLALSVQ 248
Query: 181 HNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N + LD A G+ L LDLS N L + L +L L++ N + L +
Sbjct: 249 GNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAF 308
Query: 240 TFLPALEELFVSH-NSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L L EL +S + L R+D + F L L +NN + +I + L G
Sbjct: 309 LNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHL-NNNPQLSDIPMRL-----FQGNP 362
Query: 298 STLRIYLEGNPVLCDDSMRAVIDAMETI 325
+ L +Y++ N + S + +D ++ +
Sbjct: 363 NILEVYMQSNSLQTLYSAQFPVDQLQKL 390
Score = 182 (69.1 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 72/263 (27%), Positives = 121/263 (46%)
Query: 3 TDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNR 60
++L L L+ N + SL L+ L LL + N++E + P+ + + L L NN
Sbjct: 120 SELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNN 179
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGL 118
I SL D +G+ L+V N++ V +LH L S+ + N + + N S GL
Sbjct: 180 IVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGL 239
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+L L + N ++E L GL L+ +DLS N + T+ Q+ ++N+ L
Sbjct: 240 KELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQ-----QLSKLSNLTYLN 294
Query: 179 LQHNEIENLDG-ALMGIHGLSRLDLSH-NKLRTISPDDFIGLDSLKMLDISHN-LLTTLE 235
L N L A + + L L LS + L+ I F+ L+ L +++N L+ +
Sbjct: 295 LGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIP 354
Query: 236 ETSKTFLPALEELFVSHNSLTRL 258
P + E+++ NSL L
Sbjct: 355 MRLFQGNPNILEVYMQSNSLQTL 377
Score = 175 (66.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 63/237 (26%), Positives = 115/237 (48%)
Query: 22 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 81
LG + + L ++ LE +P IQL + + NRI +L+ L KL++ ++
Sbjct: 49 LGGEANSRALCVDA-ALEDVP--IQLNPETKYINLTVNRIRTLEFSLPFYMKLEILDLSQ 105
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 140
N I + F+ L +++L N ++S++ + GLT L L LS N++ +
Sbjct: 106 NIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALS 165
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSR 199
L L +DL+ N I N +G+ + L ++N + ++ + L +H L
Sbjct: 166 DLASLVELDLTNNNIVSLED-----NCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKS 220
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
LD+S N + + D F GL L L + N+++ L+ ++ L +L+ L +S N+LT
Sbjct: 221 LDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLT 277
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 74/272 (27%), Positives = 119/272 (43%)
Query: 23 GTLSKLQLLVIEQNQLEALPSDIQLF--SQLGSLYAN-NNRITSLDGLLRGLT-KLQVFN 78
G + L LL++ L LP + F S+ L N+R +D L + +L
Sbjct: 19 GAIPVLLLLLLT---LVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPET 75
Query: 79 MDFN-QITMVRRDEFQN--LHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 134
N + +R EF L+ + L N I ++ S + ++L L LS N ++
Sbjct: 76 KYINLTVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSL 135
Query: 135 LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMG 193
+GL L +DLS+N+I + + ++ EL L +N I +L D G
Sbjct: 136 HKHAFKGLTNLLLLDLSFNRIETVHP-----TALSDLASLVELDLTNNNIVSLEDNCFKG 190
Query: 194 IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHN 253
++ L L +N+L + + L +LK LD+S NL+ + S L L L V N
Sbjct: 191 MNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGN 250
Query: 254 SLTRLDKD-FHGLPVLCKADLAHNNIKAINIQ 284
++ LD F GL L DL+ NN+ + Q
Sbjct: 251 VMSELDLSAFEGLISLKHLDLSDNNLTMVPTQ 282
Score = 155 (59.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 71/266 (26%), Positives = 124/266 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GLT+L L L+ NR++++ L L+ L L + N + +L + + + L L N
Sbjct: 142 GLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRN 201
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
NR+ + L L L+ +M N + VR D F+ L L ++S+Q N ++ ++ S+
Sbjct: 202 NRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFE 261
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L +L LS N LT + L L ++L N+ ++ N+F
Sbjct: 262 GLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQL--------PAVAFLNLFH 313
Query: 177 LKLQH----NEIENLDG-ALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNL 230
L+ H + ++ +D A + L L L++N +L I F G ++ + + N
Sbjct: 314 LRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNS 373
Query: 231 LTTLEETSKTF-LPALEELFVSHNSL 255
L TL S F + L++L++ N L
Sbjct: 374 LQTLY--SAQFPVDQLQKLYLGDNPL 397
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 63/271 (23%), Positives = 124/271 (45%)
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLS 127
+GLT L + ++ FN+I V +L +L + L NN I S+ + G+ L L
Sbjct: 141 KGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFR 200
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGKNQ-----VQGVT------NIF 175
+N+L + ++ L L+++D+S N + + EG + VQG + F
Sbjct: 201 NNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAF 260
Query: 176 E--LKLQHNEIE--NLDGA----LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDIS 227
E + L+H ++ NL L + L+ L+L N+ + F+ L L+ L +S
Sbjct: 261 EGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLS 320
Query: 228 H-NLLTTLEETSKTFLPALEELFVSHN-SLTRLD-KDFHGLPVLCKADLAHNNIKAINIQ 284
+ L ++ + L+ L +++N L+ + + F G P + + + N+++ +
Sbjct: 321 RLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTL--- 377
Query: 285 LALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
Q F ++ ++YL NP+ C+ S+
Sbjct: 378 --YSAQ---FPVDQLQKLYLGDNPLQCNCSL 403
>FB|FBgn0000313 [details] [associations]
symbol:chp "chaoptic" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS;IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA] [GO:0042051 "compound
eye photoreceptor development" evidence=NAS] [GO:0042052
"rhabdomere development" evidence=IGI] [GO:0016028 "rhabdomere"
evidence=IDA] Pfam:PF00560 InterPro:IPR000225 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005886 GO:GO:0007601
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050896
GO:GO:0007156 GO:GO:0016028 HOGENOM:HOG000265621 GO:GO:0042052
GeneTree:ENSGT00700000104056 EMBL:M19017 EMBL:M19008 EMBL:M19009
EMBL:M19010 EMBL:M19011 EMBL:M19012 EMBL:M19013 EMBL:M19014
EMBL:M19016 EMBL:K03274 PIR:A29944 RefSeq:NP_524605.1
UniGene:Dm.21698 ProteinModelPortal:P12024 SMR:P12024 STRING:P12024
PaxDb:P12024 PRIDE:P12024 EnsemblMetazoa:FBtr0085778
EnsemblMetazoa:FBtr0330099 GeneID:43690 KEGG:dme:Dmel_CG1744
CTD:64152 FlyBase:FBgn0000313 InParanoid:P12024 OMA:LSHNDEL
OrthoDB:EOG4VQ844 PhylomeDB:P12024 ChiTaRS:CHP GenomeRNAi:43690
NextBio:835267 Bgee:P12024 GermOnline:CG1744 Uniprot:P12024
Length = 1315
Score = 254 (94.5 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 85/296 (28%), Positives = 146/296 (49%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE-ALPSDIQ--LFSQLGSLYAN 57
LT L L +NN + S+ + L L+LL + N++E L Q + S+L +
Sbjct: 525 LTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLR 584
Query: 58 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSL 115
N +TS+ L L+ ++D N+I + R F NL L+ +SL+ N+I ++ + S
Sbjct: 585 FNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESF 644
Query: 116 SGLTKLAYLYLSHNQLTEF---LLDDIRGLKRLRTVDLSYNKINK--FGTRNEGKNQVQG 170
L KL L ++ NQL F D + L L V++S+N+I + + + G+N+ G
Sbjct: 645 QNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLN-VNVSHNQIRQLMYNSSWSGRNEHGG 703
Query: 171 V--TNIFELKLQHNEIENLD-GALMGIH-GLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
+ +NI L L HN I + G L+ L L +N L + D F + L+ LD+
Sbjct: 704 MYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDL 763
Query: 227 SHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
S+N + L+ + L+ +F HN L+ + +D F + L D +HN+++ +
Sbjct: 764 SYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGL 819
Score = 191 (72.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 82/287 (28%), Positives = 132/287 (45%)
Query: 21 QLGTLSKLQLLVIEQNQLEALP--SDIQLFSQLGSLYANNNRITSLD---------GLLR 69
Q+GTLS L + V NQ+ L S ++ G +Y +N +I L G R
Sbjct: 670 QVGTLSNLNVNV-SHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFR 728
Query: 70 GLT-KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LAYLYLS 127
L ++ +N + RD F N+ +L + L N I ++ TK L ++
Sbjct: 729 PAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFG 788
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR---NEGKNQVQGVTNIFELKLQHNEI 184
HN L++ D + ++ LR VD S+N + N G ++ V++ LK+ + +
Sbjct: 789 HNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNLFYNGGMEKLD-VSHNMMLKIPSSSL 847
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKTFLP 243
+L AL L L LS+N + TI D SL+ LDIS+N L +++ +P
Sbjct: 848 SSL-AALT----LCELHLSNNFISTIHSMDLSNKFRSLRYLDISYNYLLRIDDAVFATMP 902
Query: 244 ALEELFVSHN-SLTRLDKDFHGLP-VLCKADLAHNNIKAINIQLALK 288
L L +SHN L +DK F GL L K L + ++ + ++ LK
Sbjct: 903 KLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENISLSTVP-EIRLK 948
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 75/287 (26%), Positives = 130/287 (45%)
Query: 3 TDLNWLFLNNNRLKSL--EGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNN 59
T + L ++ N L + + G L L++ QN L +PS ++ +L L N
Sbjct: 102 TGMYRLKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYN 161
Query: 60 RITSLD-GLLRGLT-KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM--NSSL 115
IT + RGL LQ + N I+ + F L L+++ L N + + N +
Sbjct: 162 HITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFV 221
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
G+ +L L L+ N L+E D + LK LRT+D+S+N I + + N+
Sbjct: 222 DGMPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLD 281
Query: 176 ELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L L++N IE L + ++R N + T+ D F ++ + + + LT +
Sbjct: 282 NLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAFKPA-RIREIYMRYCGLTNI 340
Query: 235 EETS-KTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIK 279
+ + + +L+ L +S N+LT+L K F+ VL + N IK
Sbjct: 341 SPVAFDSLVNSLQILDLSGNNLTKLHHKLFNNFDVLRVISMRDNKIK 387
Score = 171 (65.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 80/298 (26%), Positives = 135/298 (45%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYANNNRITSLD 65
L + N L+ +E + + L I N L +P D L L L N + +
Sbjct: 84 LHMENTGLREIEPYFLQSTGMYRLKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIP 143
Query: 66 GL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHN-LDSISLQNNQITS-MNSSLSGLTKLA 122
LR L KL+ ++ +N IT ++ D F+ L + L ++ L+ N I+ M+ S SGL L
Sbjct: 144 SKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILE 203
Query: 123 YLYLSHNQLTEFLLDD---IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L LS N L E +D + G+ RL + L+ N +++ G + ++ L +
Sbjct: 204 TLDLSGNNLFE--IDPNVFVDGMPRLTRLLLTDNILSEIPYDALGP-----LKSLRTLDI 256
Query: 180 QHNEIENLDG-ALMGIHG-----LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
HN I +L G I L L L +N + + P+ F D++ N + T
Sbjct: 257 SHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHT 316
Query: 234 LEETSKTFLPA-LEELFVSHNSLTRL-----DKDFHGLPVLCKADLAHNNIKAINIQL 285
L E + F PA + E+++ + LT + D + L +L DL+ NN+ ++ +L
Sbjct: 317 LREDA--FKPARIREIYMRYCGLTNISPVAFDSLVNSLQIL---DLSGNNLTKLHHKL 369
Score = 169 (64.5 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 77/316 (24%), Positives = 151/316 (47%)
Query: 2 LTDLNWLFLNNNRLKS-LEGQL-GTL-SKLQLLVIEQNQLEALPSDIQLFS--QLGSLYA 56
L +L L L++NR++ L+G G + SKL+ + + N L ++ S F L L+
Sbjct: 549 LKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSI-SQHTFFDLEALRKLHL 607
Query: 57 NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN--- 112
++N+I ++ L +L+ ++ N+I + + FQNL L+ + + NQ+ + N
Sbjct: 608 DDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNFNFDY 667
Query: 113 -SSLSGLTKLAYLYLSHNQLTEFLLD-------DIRGL--KRLRTVDLSYNKINKFGTRN 162
+ L+ L + +SHNQ+ + + + + G+ ++ +DLS+N I+ +
Sbjct: 668 FDQVGTLSNLN-VNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISII---H 723
Query: 163 EGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSL 221
G + ++ + L L +N + N + G + L LDLS+N + + D F L
Sbjct: 724 PGYFRPAEIS-LTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQL 782
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN---NI 278
+++ HN L+ + + + L + SHN L L + + K D++HN I
Sbjct: 783 QLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNLFYNGGMEKLDVSHNMMLKI 842
Query: 279 KAINIQ-LALKTQCQI 293
+ ++ LA T C++
Sbjct: 843 PSSSLSSLAALTLCEL 858
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 74/274 (27%), Positives = 131/274 (47%)
Query: 5 LNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRIT 62
L WL L+ N + L+ +LQL+ N L +P DI + L + ++N +
Sbjct: 758 LQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLR 817
Query: 63 SL-DGLLR--GLTKLQVFNMDFNQITMVRRDEFQNLHNLD--SISLQNNQITSMNS-SLS 116
L D L G+ KL V + N + + +L L + L NN I++++S LS
Sbjct: 818 GLPDNLFYNGGMEKLDVSH---NMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLS 874
Query: 117 G-LTKLAYLYLSHNQLTEFLLDD--IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
L YL +S+N L +DD + +L +DLS+N+ K ++ G+ N
Sbjct: 875 NKFRSLRYLDISYNYLLR--IDDAVFATMPKLAVLDLSHNRDLKVMDKS-----FMGLEN 927
Query: 174 -IFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
+ +L L++ + + + + L L +N+L +I + + +L+MLD+S+N LT
Sbjct: 928 SLIKLGLENISLSTVPE--IRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLT 985
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGL 265
+ ++ LP L L +S N +T L+ + F G+
Sbjct: 986 NVPLMTQA-LPHLRRLMLSGNPITSLNNNSFDGV 1018
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 58/221 (26%), Positives = 101/221 (45%)
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNL-HNLDSISLQNNQITSMNSS--LSGLTKLAYL 124
+RGL +L F+ N I+ + D F + H+L S+ + + S + L LT L L
Sbjct: 475 VRGLKRLD-FSE--NGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQEL 531
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
S+N ++ LK LR ++L N+I + +G Q + + E+ L+ N +
Sbjct: 532 DFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQV---LKGTFQGDIHSKLEEISLRFNHL 588
Query: 185 ENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
++ + L +L L NK+ I F+ LD L+ L + N + L + S LP
Sbjct: 589 TSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLP 648
Query: 244 ALEELFVSHNSLTRLDKDFH---GLPVLCKADLAHNNIKAI 281
LE L ++ N L + D+ G +++HN I+ +
Sbjct: 649 KLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQL 689
Score = 151 (58.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 64/279 (22%), Positives = 131/279 (46%)
Query: 12 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLLR 69
N+ + + G + LQ L + N + L D + QL ++ +N ++ + + +
Sbjct: 742 NSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFK 801
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAY--LYL 126
+ L++ + N + + + F N ++ + + +N + + +SSLS L L L+L
Sbjct: 802 PVQGLRIVDFSHNHLRGLPDNLFYN-GGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHL 860
Query: 127 SHNQLTEFLLDDIRG-LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN-EI 184
S+N ++ D+ + LR +D+SYN + + + + L L HN ++
Sbjct: 861 SNNFISTIHSMDLSNKFRSLRYLDISYNYLLRIDDA-----VFATMPKLAVLDLSHNRDL 915
Query: 185 ENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
+ +D + MG+ + L +L L + L T+ P+ I L L+ + +N L ++ + +
Sbjct: 916 KVMDKSFMGLENSLIKLGLENISLSTV-PE--IRLKYLREFRLGYNELPSIPQELAHNMS 972
Query: 244 ALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAIN 282
L L +S+N LT + LP L + L+ N I ++N
Sbjct: 973 NLRMLDLSNNDLTNVPLMTQALPHLRRLMLSGNPITSLN 1011
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 61/246 (24%), Positives = 112/246 (45%)
Query: 11 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS----QLGSLYANNNRITSLDG 66
++N L+ L L ++ L + N + +PS L S L L+ +NN I+++
Sbjct: 812 SHNHLRGLPDNLFYNGGMEKLDVSHNMMLKIPSS-SLSSLAALTLCELHLSNNFISTIHS 870
Query: 67 --LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ-ITSMNSSLSGLTKLAY 123
L L+ ++ +N + + F + L + L +N+ + M+ S GL +
Sbjct: 871 MDLSNKFRSLRYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLEN-SL 929
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
+ L ++ + +IR LK LR L YN++ + ++N+ L L +N+
Sbjct: 930 IKLGLENISLSTVPEIR-LKYLREFRLGYNELPSIP-----QELAHNMSNLRMLDLSNND 983
Query: 184 IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL-DSLKMLDISHNLLTTLEETSKTFL 242
+ N+ + L RL LS N + +++ + F G+ + L+MLDIS+ L E L
Sbjct: 984 LTNVPLMTQALPHLRRLMLSGNPITSLNNNSFDGVNEDLEMLDISNFRLHYFEYGCLDSL 1043
Query: 243 PALEEL 248
P L L
Sbjct: 1044 PHLRSL 1049
Score = 143 (55.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 65/259 (25%), Positives = 118/259 (45%)
Query: 36 NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG--LTKLQVFNMDFNQITMVRRDEFQ 93
N + L D +++ +Y +T++ + + LQ+ ++ N +T + F
Sbjct: 312 NPIHTLREDAFKPARIREIYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHHKLFN 371
Query: 94 NLHNLDSISLQNNQITSMN--SSLSGLT-KLAYLYLSHNQLTEFLLDDIRGLKRLRTV-D 149
N L IS+++N+I + + + L L LS ++ L +R + R+R +
Sbjct: 372 NFDVLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRNDPTNLQTLRNMTRMRNMRS 431
Query: 150 LSYNKINKFGTRNEGKNQVQ--GVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNK 206
LS I++ G+ + G + GV + +L++ + + A + GL RLD S N
Sbjct: 432 LS---ISRLGSSSVGPEDFKDFGV-ELEDLQITRASLSGIQSHAFKHVRGLKRLDFSENG 487
Query: 207 LRTISPDDF--IGLDSLKMLDISHNLL-TTLEETSKTFLPALEELFVSHNSLTRL-DKDF 262
+ +I D F IG SL L +SH + L L +L+EL S+N ++ + D F
Sbjct: 488 ISSIENDAFHEIG-HSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSF 546
Query: 263 HGLPVLCKADLAHNNIKAI 281
H L L +L N I+ +
Sbjct: 547 HFLKNLRLLELHDNRIEQV 565
>MGI|MGI:1927197 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C.
elegans)" species:10090 "Mus musculus" [GO:0000164 "protein
phosphatase type 1 complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019903
"protein phosphatase binding" evidence=ISO] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068921 MGI:MGI:1927197 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 CTD:8036 HOVERGEN:HBG055661
OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38 EMBL:DQ479926
EMBL:AK077798 EMBL:AK146447 EMBL:BC013722 EMBL:BC049775
EMBL:BC083060 IPI:IPI00131754 RefSeq:NP_001161977.1
RefSeq:NP_062632.2 UniGene:Mm.228669 ProteinModelPortal:O88520
SMR:O88520 IntAct:O88520 STRING:O88520 PhosphoSite:O88520
PaxDb:O88520 PRIDE:O88520 Ensembl:ENSMUST00000025932
Ensembl:ENSMUST00000169861 GeneID:56392 KEGG:mmu:56392
UCSC:uc008hxg.2 InParanoid:Q91VH8 NextBio:312492 Bgee:O88520
CleanEx:MM_SHOC2 Genevestigator:O88520
GermOnline:ENSMUSG00000024976 Uniprot:O88520
Length = 582
Score = 249 (92.7 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 70/290 (24%), Positives = 137/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ L L + FN+IT V +D +NL L +S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLPKLSMLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L +I ++ +DL +N + + + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNDLLDL------PDTIGNLSSLNRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L L L ++ N +
Sbjct: 294 NRLSAIPRSLAKCSALEELNLENNNISTL-PESLLSSLVKLNSLTLARNCFQLYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 236 (88.1 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 78/301 (25%), Positives = 153/301 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L NR+ ++E + L KL +L I +N+++ LP++I L +L +N++
Sbjct: 191 LDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + T++ ++ N + + D NL +L+ + L+ N+++++ SL+ + L
Sbjct: 251 EHLPKEIGNCTQITNLDLQHNDLLDLP-DTIGNLSSLNRLGLRYNRLSAIPRSLAKCSAL 309
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++H
Sbjct: 310 EELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVG--GPSQF---STIYSLNMEH 364
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E +
Sbjct: 365 NRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DVS 422
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNST 299
L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 300 L 300
L
Sbjct: 483 L 483
Score = 230 (86.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 77/255 (30%), Positives = 127/255 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN- 59
L+ LN L L NRL ++ L S L+ L +E N + LP + +L SL N
Sbjct: 283 LSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNC 342
Query: 60 -RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
++ + G + T + NM+ N+I + F L +++++NQ+TS+
Sbjct: 343 FQLYPVGGPSQFST-IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTW 401
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + L L+ NQLT+ + +D+ GL L + LS N + K G ++ + EL
Sbjct: 402 TSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKLP---HGLGNLR---KLRELD 454
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L E
Sbjct: 455 LEENKLESLPNEIAYLKDLQKLVLTNNQLSTL-PRGIGHLTNLTHLGLGENLLTHLPEEI 513
Query: 239 KTFLPALEELFVSHN 253
T L LEEL+++ N
Sbjct: 514 GT-LENLEELYLNDN 527
Score = 229 (85.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 65/246 (26%), Positives = 130/246 (52%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+ + L + L++L L + N+L++LP+++ L +L + N +TSL
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L KL+ L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHN++ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PKEIGNCTQITNLDLQHNDLLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + L+RL L +N+L I P +L+ L++ +N ++TL E+ + L L
Sbjct: 277 PDTIGNLSSLNRLGLRYNRLSAI-PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 162 (62.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 44/133 (33%), Positives = 73/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L LG L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+++L + LT L + N +T + +E L NL+ + L +N + S+ L+ +
Sbjct: 483 LSTLPRGIGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLPFELALCS 541
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 542 KLSIMSIENCPLS 554
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/124 (33%), Positives = 63/124 (50%)
Query: 167 QVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
+V + N+ L L N + +L +L + L LDL HNKLR I P LDSL L +
Sbjct: 141 EVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREI-PSVVYRLDSLTTLYL 199
Query: 227 SHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA 286
N +TT+E+ K LP L L + N + +L + L L D+AHN ++ + ++
Sbjct: 200 RFNRITTVEKDIKN-LPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIG 258
Query: 287 LKTQ 290
TQ
Sbjct: 259 NCTQ 262
Score = 139 (54.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 66/238 (27%), Positives = 109/238 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L LN L L N + G S + L +E N++ +P I FS+ L L
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 387
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +L+ + L NN + + L
Sbjct: 388 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGLGN 446
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N+++ T G + +TN+ L
Sbjct: 447 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLS---TLPRG---IGHLTNLTHL 499
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N + +L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 500 GLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 556
>UNIPROTKB|E2R260 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AAEX03015529 RefSeq:XP_535013.2
ProteinModelPortal:E2R260 Ensembl:ENSCAFT00000017230 GeneID:477819
KEGG:cfa:477819 NextBio:20853238 Uniprot:E2R260
Length = 582
Score = 248 (92.4 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 69/290 (23%), Positives = 137/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 122 LTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKL 181
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ L L + FN+IT V +D +NL L +S++ N+I + + + L L
Sbjct: 182 REIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGELCNL 240
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L +I ++ +DL +N++ + + ++++ L L++
Sbjct: 241 ITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNELLDL------PDTIGNLSSLSRLGLRY 293
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + + P+ + L L L ++ N +
Sbjct: 294 NRLSAIPRSLAKCSALEELNLENNNISAL-PESLLSSLVKLNSLTLARNCFQLYPVGGPS 352
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 353 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 79/301 (26%), Positives = 154/301 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L NR+ ++E + LSKL +L I +N+++ LP++I L +L +N++
Sbjct: 191 LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 250
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + T++ ++ N++ + D NL +L + L+ N+++++ SL+ + L
Sbjct: 251 EHLPKEIGNCTQITNLDLQHNELLDLP-DTIGNLSSLSRLGLRYNRLSAIPRSLAKCSAL 309
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N ++ + L +L ++ L+ N + G +Q + I+ L ++H
Sbjct: 310 EELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVG--GPSQF---STIYSLNMEH 364
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E +
Sbjct: 365 NRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DVS 422
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNST 299
L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 300 L 300
L
Sbjct: 483 L 483
Score = 240 (89.5 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 67/246 (27%), Positives = 130/246 (52%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+ + L + L++L L + N+L++LP+++ L +L N N +TSL
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDS 164
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ L +L ++ L+ N+IT++ + L+KL+ L +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIR 223
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 224 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PKEIGNCTQITNLDLQHNELLDL 276
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + LSRL L +N+L I P +L+ L++ +N ++ L E+ + L L
Sbjct: 277 PDTIGNLSSLSRLGLRYNRLSAI-PRSLAKCSALEELNLENNNISALPESLLSSLVKLNS 335
Query: 248 LFVSHN 253
L ++ N
Sbjct: 336 LTLARN 341
Score = 229 (85.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 77/255 (30%), Positives = 128/255 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN- 59
L+ L+ L L NRL ++ L S L+ L +E N + ALP + +L SL N
Sbjct: 283 LSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNC 342
Query: 60 -RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
++ + G + T + NM+ N+I + F L +++++NQ+TS+
Sbjct: 343 FQLYPVGGPSQFST-IYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTW 401
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + L L+ NQLT+ + +D+ GL L + LS N + K G ++ + EL
Sbjct: 402 TSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKLP---HGLGNLR---KLRELD 454
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L E
Sbjct: 455 LEENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEI 513
Query: 239 KTFLPALEELFVSHN 253
T L LEEL+++ N
Sbjct: 514 GT-LENLEELYLNDN 527
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 45/133 (33%), Positives = 73/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L LG L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 423 GLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 482
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+T+L + LT L + N +T + +E L NL+ + L +N + S+ L+ +
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLPFELALCS 541
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 542 KLSIMSIENCPLS 554
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 66/238 (27%), Positives = 108/238 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L LN L L N + G S + L +E N++ +P I FS+ L L
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 387
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +L+ + L NN + + L
Sbjct: 388 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGLGN 446
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N++ T G + +TN+ L
Sbjct: 447 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLT---TLPRG---IGHLTNLTHL 499
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N + +L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 500 GLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 556
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 247 (92.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 78/283 (27%), Positives = 141/283 (49%)
Query: 4 DLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRI 61
+L L L+NN + L + TL L++L + N L +LP+++ L +L ++N +
Sbjct: 71 NLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDV 130
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTK 120
GL++LQ ++ N+++ + + L L ++ L N++ SM +S ++ L
Sbjct: 131 QLGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGG 190
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L L N L+ K L+ +D+S N I G EG + G+ + L L
Sbjct: 191 LETLKLKQNLLSSLETGMFLSQKELKHLDVSENLI---GDIEEGA--LYGLEKLETLNLT 245
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL-LTTLEETSK 239
+N++ L G + L LDLS N ++ F GL +L+ L+ISH+ L T++ +
Sbjct: 246 NNQLVRLPGNTWSLPALKTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLKTIQMATF 305
Query: 240 TFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L +L L +S ++LT + F+ +P L DL++N ++ +
Sbjct: 306 VQLSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLSNNELRYV 348
Score = 216 (81.1 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 76/281 (27%), Positives = 140/281 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L L L L++N L SL ++ L L+ L+I N ++ P SQL +L +NR
Sbjct: 93 LPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDVQLGPECFAGLSQLQTLSIADNR 152
Query: 61 ITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++ L +L+ L+ L+ ++ N++ + NL L+++ L+ N ++S+ + +
Sbjct: 153 LSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQ 212
Query: 120 K-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
K L +L +S N + + + GL++L T++L+ N++ R G + + L
Sbjct: 213 KELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQL----VRLPGNTW--SLPALKTLD 266
Query: 179 LQHNEIENLDGALM-GIHGLSRLDLSHNK-LRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L N +L+ A G+ L L++SH++ L+TI F+ L SL L IS + LT +
Sbjct: 267 LSSNLFVSLETASFDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHP 326
Query: 237 TSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
++ +P L L +S+N L + P + LA+N+
Sbjct: 327 SAFNPIPPLSHLDLSNNELRYVAPGMLQWPNIRNLHLANND 367
Score = 207 (77.9 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 76/253 (30%), Positives = 126/253 (49%)
Query: 8 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITS 63
L L+NNR+ L +L L+ L++ N + L +D+ FS L SL ++N + S
Sbjct: 51 LDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADV--FSTLPSLRVLDLSSNSLLS 108
Query: 64 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKL 121
L + L L+ + N + + + F L L ++S+ +N+++ + S L L+ L
Sbjct: 109 LPNEVFSKLKNLKTLIISSNDVQL-GPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGL 167
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N+L + L L T+ L N ++ T G Q + L +
Sbjct: 168 RNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLET---GMFLSQ--KELKHLDVSE 222
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I +++ GAL G+ L L+L++N+L + P + L +LK LD+S NL +LE S
Sbjct: 223 NLIGDIEEGALYGLEKLETLNLTNNQLVRL-PGNTWSLPALKTLDLSSNLFVSLETASFD 281
Query: 241 FLPALEELFVSHN 253
LPAL+ L +SH+
Sbjct: 282 GLPALQYLNISHS 294
Score = 199 (75.1 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 73/248 (29%), Positives = 122/248 (49%)
Query: 32 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL-TKLQVFNMDFNQITMVRRD 90
V + + L ++P I L + L +NNRI+ L L L+ + N IT + D
Sbjct: 31 VCKGSSLRSIP--ILLDPRTTVLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSAD 88
Query: 91 EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
F L +L + L +N + S+ N S L L L +S N + + + GL +L+T+
Sbjct: 89 VFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDV-QLGPECFAGLSQLQTLS 147
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLR 208
++ N+++ F + K + G+ N L L N++ ++ ++M + GL L L N L
Sbjct: 148 IADNRLS-FLPPSVLK-PLSGLRN---LDLSANKLLSMPASVMNNLGGLETLKLKQNLLS 202
Query: 209 TISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVL 268
++ F+ LK LD+S NL+ +EE + L LE L +++N L RL + LP L
Sbjct: 203 SLETGMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQLVRLPGNTWSLPAL 262
Query: 269 CKADLAHN 276
DL+ N
Sbjct: 263 KTLDLSSN 270
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 247 (92.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 100/351 (28%), Positives = 162/351 (46%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
+ +L L L+NN+L ++ Q S L+ L + N LE++P + L L N
Sbjct: 124 VNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRN 183
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
T L L + L LQV + N+++ + F L NL ++LQ NQI +++ L
Sbjct: 184 SFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHN 243
Query: 119 TK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR-NEGKNQVQG-VTNIF 175
+ L LYLS+N +++ L +L NK+ FG E V G + N+
Sbjct: 244 NRNLQRLYLSNNHISQLPPGIFMQLPQL-------NKLTLFGNSLRELSPGVFGPMPNLR 296
Query: 176 ELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
EL L +N I +L D ++ L L LSHN+L ISP F GL +L+ L + N L L
Sbjct: 297 ELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDL 356
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
+ L L+ + + N L +L F + L L +NN++ N+ L + +
Sbjct: 357 DSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLE--NLPLGIFDH--L 412
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGET--ICQPDSN 342
L LR+Y NP CD + + + + + N ++ +T +C +N
Sbjct: 413 VNL-CELRLY--DNPWRCDSDILPLHNWL--LLNRARLGTDTLPVCSSPAN 458
Score = 219 (82.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 77/276 (27%), Positives = 129/276 (46%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD 65
L + N L ++ G L L+ L + N+L LP + Q + L SL +NN++ +
Sbjct: 82 LKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQ 141
Query: 66 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAY 123
+ L+ + N + + + F +L L ++L N T ++ L L L
Sbjct: 142 PAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQV 201
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L N+L++ + L L+ + L N+I GT + G N+ L L +N
Sbjct: 202 LRLHENRLSDIPMGTFDALGNLQELALQENQI---GTLSPGL--FHNNRNLQRLYLSNNH 256
Query: 184 IENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I L G M + L++L L N LR +SP F + +L+ L + +N +T+L + + + L
Sbjct: 257 ISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHL 316
Query: 243 PALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
L+ L +SHN LT + F+GL L + L H N
Sbjct: 317 NQLQVLILSHNQLTYISPGAFNGLTNLRELSL-HTN 351
Score = 200 (75.5 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 84/293 (28%), Positives = 138/293 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNN 59
L L +L L NN+L+ L ++ ++ L+ L++ NQL + P+ FS L L + N
Sbjct: 100 LGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGN 159
Query: 60 RITSL-----DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
+ S+ D L+ GLTKL N+ N T + FQ+L NL + L N+++ +
Sbjct: 160 NLESIPEEAFDHLV-GLTKL---NLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMG 215
Query: 114 SLSGLTKLAYLYLSHNQ---LTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG 170
+ L L L L NQ L+ L + R L+RL LS N I++
Sbjct: 216 TFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLY---LSNNHISQLPP-----GIFMQ 267
Query: 171 VTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
+ + +L L N + L + G + L L L +N + +++ + F L+ L++L +SHN
Sbjct: 268 LPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHN 327
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
LT + + L L EL + N+L LD + F L L L N ++ +
Sbjct: 328 QLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQL 380
Score = 162 (62.1 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 63/234 (26%), Positives = 105/234 (44%)
Query: 53 SLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 111
SL N IT L + L ++ L M+ N+++ + F+NL +L +SL NN++ +
Sbjct: 57 SLQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRML 116
Query: 112 NSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG 170
+ + L L LS+NQL + LR + L N + E + + G
Sbjct: 117 PIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIP--EEAFDHLVG 174
Query: 171 VTNIFELKLQHNEIENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
+T +L L N +L L G L L L N+L I F L +L+ L + N
Sbjct: 175 LT---KLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQEN 231
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
+ TL L+ L++S+N +++L F LP L K L N+++ ++
Sbjct: 232 QIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELS 285
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 247 (92.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 101/343 (29%), Positives = 158/343 (46%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
+ +L L L+NN+L ++ Q S L+ L + N LE +P + L L NN
Sbjct: 124 VNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNN 183
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
T L + + L LQV + N+++ + F L NL ++LQ NQI +++ L
Sbjct: 184 GFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHN 243
Query: 119 TK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR-NEGKNQVQG-VTNIF 175
+ L LYLS+N ++ L L NK+ FG E V G + N+
Sbjct: 244 NRNLQRLYLSNNHISHLPPGIFMQLPHL-------NKLTLFGNSLKELSPGVFGPMPNLR 296
Query: 176 ELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
EL L +N I +L D A ++ L L LSHN+L ISP F GL +L+ L + N L L
Sbjct: 297 ELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDL 356
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
+ L L + + +N L +L F + L L +NN++ N+ L +
Sbjct: 357 DGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLE--NLPLGIFDH--- 411
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETI 336
G LR+Y NP CD ++ + D + I N ++ +T+
Sbjct: 412 LGNLCELRLY--DNPWRCDSNILPLHDWL--ILNRARLGTDTL 450
Score = 201 (75.8 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 75/278 (26%), Positives = 133/278 (47%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLF---SQLGSLYANNNRITS 63
L + N L ++ G L L+ L + N+L+ LP ++LF + L +L +NN++
Sbjct: 82 LKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLP--VRLFQDVNNLETLLLSNNQLVQ 139
Query: 64 LD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKL 121
+ + L+ + N + + F +L L ++L NN T ++ + L L
Sbjct: 140 IQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNL 199
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L N+L++ + L L+ + L N+I GT + G N+ L L +
Sbjct: 200 QVLRLYENRLSDIPMGTFDALGNLQELALQENQI---GTLSPGL--FHNNRNLQRLYLSN 254
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I +L G M + L++L L N L+ +SP F + +L+ L + +N +T+L + + +
Sbjct: 255 NHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFS 314
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
L L+ L +SHN L+ + F+GL L + L H N
Sbjct: 315 HLNQLQVLILSHNQLSYISPGAFNGLTNLRELSL-HTN 351
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 80/289 (27%), Positives = 134/289 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNN 59
L L L L NN+LK+L +L ++ L+ L++ NQL + P+ FS L L N
Sbjct: 100 LGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGN 159
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
+ + +G+ L L N+ N T + FQ+L NL + L N+++ + +
Sbjct: 160 NLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDA 219
Query: 118 LTKLAYLYLSHNQ---LTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L L L L NQ L+ L + R L+RL LS N I+ + ++
Sbjct: 220 LGNLQELALQENQIGTLSPGLFHNNRNLQRLY---LSNNHISHLPP-----GIFMQLPHL 271
Query: 175 FELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+L L N ++ L + G + L L L +N + ++ + F L+ L++L +SHN L+
Sbjct: 272 NKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSY 331
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
+ + L L EL + N+L LD + F L L L +N ++ +
Sbjct: 332 ISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQL 380
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 69/252 (27%), Positives = 114/252 (45%)
Query: 37 QLEALPSDIQLFSQLGSLYANNNRITSL--DGLLRGLTKLQVFNMDFNQITMVRRDEFQN 94
Q+ A+PS + + SL N IT L D L ++ L M+ N++ + F+N
Sbjct: 43 QIVAMPSPLPWNAM--SLQILNTHITELPEDKFLN-ISALIALKMEKNELANIMPGAFRN 99
Query: 95 LHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 153
L +L +SL NN++ ++ L + L L LS+NQL + L+ + L N
Sbjct: 100 LGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGN 159
Query: 154 KINKFGTRNEGK-NQVQGVTNIFELKLQHNEIENLDGALMGIHG-LSRLDLSHNKLRTIS 211
+ EG + + G+T +L L +N +L + G L L L N+L I
Sbjct: 160 NLEYIP---EGVFDHLVGLT---KLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIP 213
Query: 212 PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCK 270
F L +L+ L + N + TL L+ L++S+N ++ L F LP L K
Sbjct: 214 MGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNK 273
Query: 271 ADLAHNNIKAIN 282
L N++K ++
Sbjct: 274 LTLFGNSLKELS 285
>FB|FBgn0000709 [details] [associations]
symbol:fliI "flightless I" species:7227 "Drosophila
melanogaster" [GO:0007629 "flight behavior" evidence=IMP]
[GO:0010004 "gastrulation involving germ band extension"
evidence=IMP] [GO:0003779 "actin binding" evidence=ISS;NAS]
[GO:0005509 "calcium ion binding" evidence=ISS;NAS] [GO:0030239
"myofibril assembly" evidence=IMP] [GO:0007527 "adult somatic
muscle development" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007122 PRINTS:PR00597 PROSITE:PS51450 SMART:SM00262
GO:GO:0003779 GO:GO:0007527 EMBL:AE014298 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030239 GO:GO:0007629
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010004 EMBL:AF017777
GeneTree:ENSGT00660000095502 OMA:MEEWNED EMBL:U01182 EMBL:AF132184
PIR:S60461 RefSeq:NP_525097.1 UniGene:Dm.1666
ProteinModelPortal:Q24020 SMR:Q24020 IntAct:Q24020 STRING:Q24020
PaxDb:Q24020 PRIDE:Q24020 EnsemblMetazoa:FBtr0077192 GeneID:33110
KEGG:dme:Dmel_CG1484 CTD:2314 FlyBase:FBgn0000709
HOGENOM:HOG000263916 InParanoid:Q24020 OrthoDB:EOG4DR7T5
GenomeRNAi:33110 NextBio:781957 Bgee:Q24020 GermOnline:CG1484
Uniprot:Q24020
Length = 1256
Score = 249 (92.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 93/314 (29%), Positives = 154/314 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
++ + WL L+ +L + +LG L KL+ L + N+LE + ++ S L SL +N++
Sbjct: 28 MSRVQWLTLDRTQLAEIPEELGHLQKLEHLSLNHNRLEKIFGELTELSCLRSLDLRHNQL 87
Query: 62 TSLDGL---LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-G 117
+ G+ L L +L ++ N++ V + + NL ++L NNQI S+ + L
Sbjct: 88 KN-SGIPPELFHLEELTTLDLSHNKLKEVP-EGLERAKNLIVLNLSNNQIESIPTPLFIH 145
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
LT L +L LSHN+L E L R L L+T+DLS+N + F R Q+ + ++ L
Sbjct: 146 LTDLLFLDLSHNRL-ETLPPQTRRLINLKTLDLSHNPLELFQLR-----QLPSLQSLEVL 199
Query: 178 KLQHNE--IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
K+ + + N ++ + L LDLSHN L + PD + +L L++S N LT L
Sbjct: 200 KMSGTQRTLLNFPTSIDSLANLCELDLSHNSLPKL-PDCVYNVVTLVRLNLSDNELTELT 258
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN--NIKAINIQLALKTQCQI 293
+ + LE L +S N L L LP L + + N N + I + ++
Sbjct: 259 AGVELW-QRLESLNLSRNQLVALPAALCKLPKLRRLLVNDNKLNFEGIPSGIGKLGALEV 317
Query: 294 FGL-NSTLRIYLEG 306
F N+ L + EG
Sbjct: 318 FSAANNLLEMVPEG 331
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 78/333 (23%), Positives = 141/333 (42%)
Query: 9 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 68
F N+ + + +S++Q L +++ QL +P ++ +L L N+NR+ + G L
Sbjct: 12 FTKNDFSATFPSSMRQMSRVQWLTLDRTQLAEIPEELGHLQKLEHLSLNHNRLEKIFGEL 71
Query: 69 RGLTKLQVFNMDFNQITMVR-RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L+ L+ ++ NQ+ E +L L ++ L +N++ + L L L LS
Sbjct: 72 TELSCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPEGLERAKNLIVLNLS 131
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
+NQ+ L L +DLS+N++ Q + + N+ L L HN +E
Sbjct: 132 NNQIESIPTPLFIHLTDLLFLDLSHNRLETLPP------QTRRLINLKTLDLSHNPLELF 185
Query: 188 D-GALMGIHGLSRLDLSHNKLRTIS-PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPAL 245
L + L L +S + ++ P L +L LD+SHN L L + + L
Sbjct: 186 QLRQLPSLQSLEVLKMSGTQRTLLNFPTSIDSLANLCELDLSHNSLPKLPDCVYNVV-TL 244
Query: 246 EELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLE 305
L +S N LT L L +L+ N + A+ L + + +N ++ E
Sbjct: 245 VRLNLSDNELTELTAGVELWQRLESLNLSRNQLVALPAALCKLPKLRRLLVNDN-KLNFE 303
Query: 306 GNPVLCDDSMRAVIDAMETINNNTKIHGETICQ 338
G P ++ NN ++ E +C+
Sbjct: 304 GIP--SGIGKLGALEVFSAANNLLEMVPEGLCR 334
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 62/262 (23%), Positives = 116/262 (44%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL--PSDIQLFSQLGSLYANN 58
L +L L L++N L+ + QL +L L++L + Q L P+ I + L L ++
Sbjct: 169 LINLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSIDSLANLCELDLSH 228
Query: 59 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
N + L + + L N+ N++T + + L+S++L NQ+ ++ ++L L
Sbjct: 229 NSLPKLPDCVYNVVTLVRLNLSDNELTELTAG-VELWQRLESLNLSRNQLVALPAALCKL 287
Query: 119 TKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
KL L ++ N+L + I G+ +L +++ N EG + + +L
Sbjct: 288 PKLRRLLVNDNKLN---FEGIPSGIGKLGALEVFSAANNLLEMVPEGLCRCGALK---QL 341
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTI--SPDDFIGLDSLKMLDISHNLLTTLE 235
L N + L A+ + GL +LDL +N + P + SL+ +I +L T L
Sbjct: 342 NLSCNRLITLPDAIHLLEGLDQLDLRNNPELVMPPKPSEASKATSLEFYNIDFSLQTQLR 401
Query: 236 ETSKTFLPALEELFVSHNSLTR 257
P++ +S R
Sbjct: 402 LAGAAVPPSMPSSATPKDSTAR 423
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 248 (92.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 78/266 (29%), Positives = 133/266 (50%)
Query: 5 LNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
L +L L+ N++ SLE G G +S L +L I QN+L LP + SQL L NRI
Sbjct: 128 LKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFTLSQLQVLELRRNRIRV 187
Query: 64 LDGLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKL 121
++ L+ + L L+ M N IT + L N++ + L+ N +T +N L GL L
Sbjct: 188 VESLIFKELKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTELNKGWLYGLHML 247
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQV-QGVTNIFELKLQ 180
L ++ N + D RL +DLS+N +++ ++ V G++ + L L
Sbjct: 248 RILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRL------EDWVFAGLSLLQSLNLG 301
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIG----LDSLKMLDISHNLLTTLE 235
N+I +L +G + + LD+ +N++ +++ +DFIG L L L + +N + T+
Sbjct: 302 DNQISHLGEGVFSSLANVRTLDIRNNEI-SLAIEDFIGMFVGLKRLNSLVLQNNKIRTIT 360
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD 261
+ + L LE L +S N + + D
Sbjct: 361 KRAFEGLMELENLDLSKNGIMSIHPD 386
Score = 244 (91.0 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 82/263 (31%), Positives = 138/263 (52%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNR 60
++ L L +N NRL L ++ TLS+LQ+L + +N++ + S I + L SL N
Sbjct: 149 ISSLLVLKINQNRLSLLPDKVFTLSQLQVLELRRNRIRVVESLIFKELKALKSLKMQRNG 208
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
IT L DG L GL ++ +++N +T + + LH L + + N I + +
Sbjct: 209 ITKLMDGALFGLENMEELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFC 268
Query: 120 -KLAYLYLSHNQLTEFLLDD--IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+L L LS N L+ L+D GL L++++L N+I+ G EG + N+
Sbjct: 269 HRLEELDLSFNHLSR--LEDWVFAGLSLLQSLNLGDNQISHLG---EGV--FSSLANVRT 321
Query: 177 LKLQHNEI----ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L +++NEI E+ G +G+ L+ L L +NK+RTI+ F GL L+ LD+S N +
Sbjct: 322 LDIRNNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTITKRAFEGLMELENLDLSKNGIM 381
Query: 233 TLEETSKTFLPALEELFVSHNSL 255
++ + T L L+ L ++ +SL
Sbjct: 382 SIHPDAFTHLK-LKTLDLNSSSL 403
Score = 209 (78.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 71/250 (28%), Positives = 126/250 (50%)
Query: 33 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDE 91
I QN+L A+P S + L +NRI+ + L + L+ ++ N I+ ++
Sbjct: 63 INQNELTAVPFLGDASSNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGS 122
Query: 92 FQNLHNLDSISLQNNQITSMNSSLSG-LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 150
F + L ++L N+I+S+ G ++ L L ++ N+L+ L D + L +L+ ++L
Sbjct: 123 FPPMQ-LKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLS-LLPDKVFTLSQLQVLEL 180
Query: 151 SYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRT 209
N+I + +++ + + LK+Q N I L DGAL G+ + L+L +N L
Sbjct: 181 RRNRIRV--VESLIFKELKALKS---LKMQRNGITKLMDGALFGLENMEELELEYNNLTE 235
Query: 210 ISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVL 268
++ GL L++L ++ N + + + F LEEL +S N L+RL D F GL +L
Sbjct: 236 LNKGWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLL 295
Query: 269 CKADLAHNNI 278
+L N I
Sbjct: 296 QSLNLGDNQI 305
Score = 186 (70.5 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 74/287 (25%), Positives = 137/287 (47%)
Query: 3 TDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+++ L L +NR+ + QL S L+ L + N + L + QL L + N+I
Sbjct: 79 SNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPMQLKYLNLSKNKI 138
Query: 62 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 119
+SL+ G ++ L V ++ N+++++ D+ L L + L+ N+I + S + L
Sbjct: 139 SSLEPGCFGNISSLLVLKINQNRLSLLP-DKVFTLSQLQVLELRRNRIRVVESLIFKELK 197
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L + N +T+ + + GL+ + ++L YN + + N+G + G+ + L++
Sbjct: 198 ALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTEL---NKG--WLYGLHMLRILRV 252
Query: 180 QHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
N I + A H L LDLS N L + F GL L+ L++ N ++ L E
Sbjct: 253 NQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGV 312
Query: 239 KTFLPALEELFVSHNSLTRLDKDFHGLPV----LCKADLAHNNIKAI 281
+ L + L + +N ++ +DF G+ V L L +N I+ I
Sbjct: 313 FSSLANVRTLDIRNNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTI 359
Score = 156 (60.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 47/183 (25%), Positives = 91/183 (49%)
Query: 102 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
S+ N++T++ + + L L HN+++E + + + L ++DLS N I++
Sbjct: 62 SINQNELTAVPFLGDASSNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAG 121
Query: 162 NEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDS 220
+ Q++ L L N+I +L+ G I L L ++ N+L ++ PD L
Sbjct: 122 SFPPMQLK------YLNLSKNKISSLEPGCFGNISSLLVLKINQNRL-SLLPDKVFTLSQ 174
Query: 221 LKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIK 279
L++L++ N + +E L AL+ L + N +T+L D GL + + +L +NN+
Sbjct: 175 LQVLELRRNRIRVVESLIFKELKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLT 234
Query: 280 AIN 282
+N
Sbjct: 235 ELN 237
>ZFIN|ZDB-GENE-050208-523 [details] [associations]
symbol:shoc2 "soc-2 suppressor of clear homolog (C.
elegans)" species:7955 "Danio rerio" [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA;ISS] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 ZFIN:ZDB-GENE-050208-523 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 EMBL:CR450802 GO:GO:0019903
GO:GO:0000164 HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236
CTD:8036 OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38
EMBL:AL772158 EMBL:BC125839 EMBL:BC155579 IPI:IPI00487368
IPI:IPI00817688 RefSeq:NP_001038251.1 UniGene:Dr.68831
ProteinModelPortal:Q1L8Y7 Ensembl:ENSDART00000059882
Ensembl:ENSDART00000125215 GeneID:555476 KEGG:dre:555476
InParanoid:Q1L8Y7 NextBio:20880997 Bgee:Q1L8Y7 Uniprot:Q1L8Y7
Length = 561
Score = 244 (91.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 70/290 (24%), Positives = 139/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L+L +N+L+SL ++G LS L L + +N L +LP + +L L +N++
Sbjct: 101 LTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL 160
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ ++ L + FN+IT V +D +NL L +S++ N+I + + + L L
Sbjct: 161 REIPAVVYRVSSLTTLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAEIGELCNL 219
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L +I ++ +DL +N + + + +I L L++
Sbjct: 220 ITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNDLLDL------PETIGNLASINRLGLRY 272
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + ++ P+ + L +L L ++ N + +
Sbjct: 273 NRLSAIPRSLAKCRELEELNLENNNI-SVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPS 331
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 332 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 381
Score = 242 (90.2 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 82/303 (27%), Positives = 145/303 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L+ L L L+ N L SL L L KL++L + N+L +P+ + S L +LY NRI
Sbjct: 124 LSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRI 183
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T+++ ++ L+KL + ++ N+I + E L NL ++ + +NQ+ + + T++
Sbjct: 184 TTVEKDIKNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPKEIGNCTQI 242
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L HN L + L + I L + + L YN+++ R+ K + + EL L++
Sbjct: 243 TNLDLQHNDLLD-LPETIGNLASINRLGLRYNRLSAI-PRSLAKCR-----ELEELNLEN 295
Query: 182 NEIENL-DGALMGIHGLSRLDLSHNKLRTI---SPDDFIGLDSLKMLDISHNLLTTLEET 237
N I L +G L + L+ L L+ N ++ P F + SL M HN + +
Sbjct: 296 NNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNM---EHNRINKIPFG 352
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
+ L +L + N LT L DF + + +LA N + I + ++ L+
Sbjct: 353 IFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLS 412
Query: 298 STL 300
+ L
Sbjct: 413 NNL 415
Score = 226 (84.6 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 79/302 (26%), Positives = 153/302 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
++ L L+L NR+ ++E + LSKL +L I +N+++ LP++I L +L +N++
Sbjct: 170 VSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQL 229
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDE-FQNLHNLDSISLQNNQITSMNSSLSGLTK 120
L + T Q+ N+D ++ E NL +++ + L+ N+++++ SL+ +
Sbjct: 230 EHLPKEIGNCT--QITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRE 287
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L L +N ++ + L L ++ L+ N + G +Q + I+ L ++
Sbjct: 288 LEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVG--GPSQF---STIYSLNME 342
Query: 181 HNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
HN I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E
Sbjct: 343 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPEDI- 400
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNS 298
L +LE L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 401 CGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 460
Query: 299 TL 300
L
Sbjct: 461 QL 462
Score = 215 (80.7 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 63/246 (25%), Positives = 127/246 (51%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+ + L + L++L L + N+L++LP ++ S L +L + N +TSL
Sbjct: 84 LDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDS 143
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL++ ++ N++ + ++ + +L ++ L+ N+IT++ + L+KL L +
Sbjct: 144 LDNLKKLRMLDLRHNKLREIPAVVYR-VSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIR 202
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHN++ +L
Sbjct: 203 ENKIKQ-LPAEIGELCNLITLDVAHNQLEHL------PKEIGNCTQITNLDLQHNDLLDL 255
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + ++RL L +N+L I P L+ L++ +N ++ L E + L L
Sbjct: 256 PETIGNLASINRLGLRYNRLSAI-PRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTS 314
Query: 248 LFVSHN 253
L ++ N
Sbjct: 315 LTLARN 320
Score = 215 (80.7 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 76/256 (29%), Positives = 122/256 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNR 60
L +N L L NRL ++ L +L+ L +E N + LP + L SL N
Sbjct: 262 LASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNC 321
Query: 61 ITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
S G + + NM+ N+I + F L +++++NQ+TS+ T
Sbjct: 322 FQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 381
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTRNEGKNQVQGVTNIFEL 177
+ L L+ NQLT+ + +DI GL L + LS N + K +G N K + EL
Sbjct: 382 SMVELNLATNQLTK-IPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRK--------LREL 432
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L+ N++E+L + + L +L L++N+L T+ P L +L L + NLL L E
Sbjct: 433 DLEENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTYLGLGENLLQHLPEE 491
Query: 238 SKTFLPALEELFVSHN 253
T L LE+L+++ N
Sbjct: 492 IGT-LENLEDLYLNDN 506
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 43/133 (32%), Positives = 72/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+NN LK L +G L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 402 GLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 461
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+T+L + LT L + N + + +E L NL+ + L +N + S+ L+ +
Sbjct: 462 LTTLPRGIGHLTNLTYLGLGENLLQHLP-EEIGTLENLEDLYLNDNPNLHSLPFELALCS 520
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 521 KLSIMSIENCPLS 533
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 65/238 (27%), Positives = 111/238 (46%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L +L L L N +S G S + L +E N++ +P I FS+ L L
Sbjct: 309 LVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 366
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +L+ ++L NN + + +
Sbjct: 367 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-ICGLVSLEMLTLSNNLLKKLPYGIGN 425
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N++ T G + +TN+ L
Sbjct: 426 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLT---TLPRG---IGHLTNLTYL 478
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N +++L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 479 GLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 535
>UNIPROTKB|Q8AVI4 [details] [associations]
symbol:shoc2 "Leucine-rich repeat protein SHOC-2"
species:8355 "Xenopus laevis" [GO:0000164 "protein phosphatase type
1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359 CTD:8036
PANTHER:PTHR23155:SF38 EMBL:BC042263 RefSeq:NP_001080350.1
UniGene:Xl.21982 ProteinModelPortal:Q8AVI4 GeneID:380042
KEGG:xla:380042 Xenbase:XB-GENE-493506 Uniprot:Q8AVI4
Length = 577
Score = 242 (90.2 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 79/301 (26%), Positives = 156/301 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L+ L LFL NR+ ++E L L KL +L I +N+++ LP++I L +L +N++
Sbjct: 186 LSSLTTLFLRFNRITAVEKDLKMLPKLTMLSIRENKIKHLPAEIGELCNLITLDVAHNQL 245
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + T++ ++ N++ + D NL +L + L+ N+++++ SLS ++L
Sbjct: 246 EHLPKEIGNCTQITNLDLQHNELLDLP-DTIGNLSSLSRLGLRYNRLSAVPRSLSKCSEL 304
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N ++ + L ++ ++ L+ N + G +Q ++I+ L ++H
Sbjct: 305 DELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVG--GPSQF---SSIYSLNMEH 359
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I + G LS+L++ N+L ++ P DF S+ L+++ N LT + E +
Sbjct: 360 NRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFGTWTSMVELNLATNQLTKIPE-DVS 417
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIFGLNST 299
L ++E L +S+N L +L L L + DL N ++++ ++A LK ++ N+
Sbjct: 418 GLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 477
Query: 300 L 300
L
Sbjct: 478 L 478
Score = 237 (88.5 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 83/303 (27%), Positives = 144/303 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L+ N L SL L L KL +L + N+L +P + S L +L+ NRI
Sbjct: 140 LVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKLREIPPVVYRLSSLTTLFLRFNRI 199
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T+++ L+ L KL + ++ N+I + E L NL ++ + +NQ+ + + T++
Sbjct: 200 TAVEKDLKMLPKLTMLSIRENKIKHLPA-EIGELCNLITLDVAHNQLEHLPKEIGNCTQI 258
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L HN+L + L D I L L + L YN+++ R+ K + + EL L++
Sbjct: 259 TNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAV-PRSLSK-----CSELDELNLEN 311
Query: 182 NEIENL-DGALMGIHGLSRLDLSHNKLRTI---SPDDFIGLDSLKMLDISHNLLTTLEET 237
N I L +G L + ++ L L+ N ++ P F + SL M HN + +
Sbjct: 312 NNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSSIYSLNM---EHNRINKIPFG 368
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
+ L +L + N LT L DF + + +LA N + I ++ ++ L+
Sbjct: 369 IFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILS 428
Query: 298 STL 300
+ L
Sbjct: 429 NNL 431
Score = 231 (86.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 67/290 (23%), Positives = 139/290 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT + L+L N+L+SL ++G L L L + +N L +LP + +L L +N++
Sbjct: 117 LTQITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKL 176
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ ++ L+ L + FN+IT V +D + L L +S++ N+I + + + L L
Sbjct: 177 REIPPVVYRLSSLTTLFLRFNRITAVEKD-LKMLPKLTMLSIRENKIKHLPAEIGELCNL 235
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L ++HNQL E L +I ++ +DL +N++ + + ++++ L L++
Sbjct: 236 ITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNELLDL------PDTIGNLSSLSRLGLRY 288
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
N + + +L L L+L +N + T+ P+ + L + L ++ N + +
Sbjct: 289 NRLSAVPRSLSKCSELDELNLENNNISTL-PEGLLSSLVKVNSLTLARNCFQSYPVGGPS 347
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
++ L + HN + ++ F VL K ++ N + ++ + T
Sbjct: 348 QFSSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 397
Score = 224 (83.9 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 73/254 (28%), Positives = 124/254 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNR 60
L+ L+ L L NRL ++ L S+L L +E N + LP + ++ SL N
Sbjct: 278 LSSLSRLGLRYNRLSAVPRSLSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNC 337
Query: 61 ITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
S G + + NM+ N+I + F L +++++NQ+TS+ T
Sbjct: 338 FQSYPVGGPSQFSSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 397
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
+ L L+ NQLT+ + +D+ GL + + LS N + K + + + + EL L
Sbjct: 398 SMVELNLATNQLTK-IPEDVSGLVSIEVLILSNNLLKKL------PHGIGNLRKLRELDL 450
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
+ N++E+L + + L +L L++N+L T+ P L +L L + NLLT L E
Sbjct: 451 EENKLESLPNEIAYLKDLQKLVLTNNQLTTL-PRGIGHLTNLTHLGLGENLLTHLPEEIG 509
Query: 240 TFLPALEELFVSHN 253
T L LEEL+++ N
Sbjct: 510 T-LENLEELYLNDN 522
Score = 208 (78.3 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 72/260 (27%), Positives = 127/260 (48%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L + L + L+++ L + N+L++LP+++ L L + N +TSL
Sbjct: 100 LDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLPDS 159
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L KL + ++ N++ + ++ L +L ++ L+ N+IT++ L L KL L +
Sbjct: 160 LDNLKKLCMLDLRHNKLREIPPVVYR-LSSLTTLFLRFNRITAVEKDLKMLPKLTMLSIR 218
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ + L +I L L T+D+++N++ ++ T I L LQHNE+ +L
Sbjct: 219 ENKI-KHLPAEIGELCNLITLDVAHNQLEHL------PKEIGNCTQITNLDLQHNELLDL 271
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + LSRL L +N+L + P L L++ +N ++TL E L +L
Sbjct: 272 PDTIGNLSSLSRLGLRYNRLSAV-PRSLSKCSELDELNLENNNISTLPEG---LLSSL-- 325
Query: 248 LFVSHNSLTRLDKDFHGLPV 267
V NSLT F PV
Sbjct: 326 --VKVNSLTLARNCFQSYPV 343
Score = 162 (62.1 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 43/133 (32%), Positives = 73/133 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL + L L+NN LK L +G L KL+ L +E+N+LE+LP++I L L NN+
Sbjct: 418 GLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ 477
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
+T+L + LT L + N +T + +E L NL+ + L +N + S+ L+ +
Sbjct: 478 LTTLPRGIGHLTNLTHLGLGENLLTHLP-EEIGTLENLEELYLNDNPNLHSLPFELALCS 536
Query: 120 KLAYLYLSHNQLT 132
KL+ + + + L+
Sbjct: 537 KLSIMSIENCPLS 549
Score = 138 (53.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 64/238 (26%), Positives = 109/238 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYAN 57
L +N L L N +S G S + L +E N++ +P I FS+ L L
Sbjct: 325 LVKVNSLTLARNCFQSYPVGGPSQFSSIYSLNMEHNRINKIPFGI--FSRAKVLSKLNMK 382
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N++TSL T + N+ NQ+T + D L +++ + L NN + + +
Sbjct: 383 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPED-VSGLVSIEVLILSNNLLKKLPHGIGN 441
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L L N+L E L ++I LK L+ + L+ N++ T G + +TN+ L
Sbjct: 442 LRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLT---TLPRG---IGHLTNLTHL 494
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L N + +L + + L L L+ N L ++ P + L ++ I + L+ L
Sbjct: 495 GLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL-PFELALCSKLSIMSIENCPLSHL 551
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 47/183 (25%), Positives = 79/183 (43%)
Query: 97 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
N + L I + S+ LT++ LYL N+L + L ++ L L + LS N +
Sbjct: 96 NSTRLDLAKKSIHMLPVSIKDLTQITELYLYGNKL-QSLPAEVGNLVNLVKLALSENSLT 154
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI 216
+ + + + L L+HN++ + + + L+ L L N++ + D +
Sbjct: 155 SL------PDSLDNLKKLCMLDLRHNKLREIPPVVYRLSSLTTLFLRFNRITAVEKDLKM 208
Query: 217 GLDSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAH 275
L L ML I N + L E + L L L V+HN L L K+ + DL H
Sbjct: 209 -LPKLTMLSIRENKIKHLPAEIGE--LCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQH 265
Query: 276 NNI 278
N +
Sbjct: 266 NEL 268
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 246 (91.7 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 78/271 (28%), Positives = 135/271 (49%)
Query: 15 LKSLEGQLGTLSKLQLLVIEQNQLEALPS--DIQLFSQLGSLYANNNRITSL-DGLLRGL 71
L + G + S+LQ L + N+L +LP +L +L +N I++L L GL
Sbjct: 199 LSNANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGL 258
Query: 72 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQ 130
+ L+V N+ +N + + + F L + LQ N + + L L +L L LS NQ
Sbjct: 259 SSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQ 318
Query: 131 LTEFLLDD--IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD 188
LT +D+ GL RL ++LS N + + G++ + + L +++N I +++
Sbjct: 319 LTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQI-----LDMRNNSIGHIE 373
Query: 189 -GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
GA + ++ L L+L+ N+L T+ F GL L L +++NL++ +E + L+E
Sbjct: 374 EGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKE 433
Query: 248 LFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
L +S N LT + + L +L DL N I
Sbjct: 434 LDLSSNQLTEVPEAVQDLSMLKTLDLGENQI 464
Score = 198 (74.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 81/288 (28%), Positives = 131/288 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFS-QLGSLYANNN 59
L L L L +N + +L L LS L++L I N L +LPS+ + +L L+ N
Sbjct: 234 LRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGN 293
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNS-SL 115
+ L GLL L +L V ++ NQ+T V F L L ++L NN +T + S +
Sbjct: 294 DLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTF 353
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L L L + +N + L L T++L+ N+++ R G+ +
Sbjct: 354 KELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRI-----FNGLYVLT 408
Query: 176 ELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
+L L +N + ++ A L LDLS N+L + P+ L LK LD+ N ++
Sbjct: 409 KLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEV-PEAVQDLSMLKTLDLGENQISEF 467
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
+ + L L L + N + + F LP L +LA N I++I
Sbjct: 468 KNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSI 515
Score = 187 (70.9 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 84/328 (25%), Positives = 150/328 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
GL L L L+NN L + + L LQ+L + N + + L L +L
Sbjct: 331 GLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAE 390
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
NR+ +LD + GL L ++ N +++V F+N +L + L +NQ+T + ++
Sbjct: 391 NRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPEAVQD 450
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L+ L L L NQ++EF + R L +L + L N+I G G Q + + L
Sbjct: 451 LSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRI---GNITVG--MFQDLPRLSVL 505
Query: 178 KLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L N I++++ GA + + L N L I+ F L SL L++S N L +
Sbjct: 506 NLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDIN-GIFATLASLLWLNLSENHLVWFDY 564
Query: 237 TSKTFLPA-LEELFVSHNSLTRLDKDFHGLPVLCKA---DLAHNNIKAINIQLALKTQCQ 292
F+P+ L+ L + N + L +++ L + D +HN I I +++ +
Sbjct: 565 A---FIPSNLKWLDIHGNYIEALG-NYYKLQEEIRVTTLDASHNRITEIGA-MSVPNSIE 619
Query: 293 IFGLNSTLRIYLEGNPVLCDDSMRAVID 320
+ +N+ + ++ N + D + A +D
Sbjct: 620 LLFINNNIIGQIQANTFV-DKTRLARVD 646
Score = 185 (70.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 86/345 (24%), Positives = 166/345 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
L +L+ L L NRL +L+ ++ L L L + N + + S + S L L ++N
Sbjct: 380 LYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSN 439
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGL 118
++T + ++ L+ L+ ++ NQI+ + + F+NL+ L + L +N+I ++ + L
Sbjct: 440 QLTEVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDL 499
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK-FGTRNEGKNQVQGVTNIFEL 177
+L+ L L+ N++ RG T ++ +++K F T G + ++ L
Sbjct: 500 PRLSVLNLAKNRIQSIE----RGAFDKNT-EIEAIRLDKNFLTDINGIFAT--LASLLWL 552
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL-DSLKM--LDISHNLLTTL 234
L N + D A + + L LD+ N + + ++ L + +++ LD SHN +T +
Sbjct: 553 NLSENHLVWFDYAFIPSN-LKWLDIHGNYIEALG--NYYKLQEEIRVTTLDASHNRITEI 609
Query: 235 EETSKTFLP-ALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
S +P ++E LF+++N + ++ + F L + DL N + I++ AL+
Sbjct: 610 GAMS---VPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLN-ALRV-AP 664
Query: 293 IFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINN-NTKIHGETI 336
+ YL GNP CD SM + ++ INN T+ H +
Sbjct: 665 VSAEKPVPEFYLGGNPFECDCSM----EWLQRINNLTTRQHPHVV 705
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 52/185 (28%), Positives = 87/185 (47%)
Query: 114 SLSGLTKLAYLYLSHN---QLTEFLLDDIRGLK-------RLRTVD-LSYN-KINKFGTR 161
S GL +L+ L+L N QL E + + L+ R+R+ + L ++ K+
Sbjct: 140 SFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSAL 199
Query: 162 NEGKNQVQGVTNIFELKLQHNEIENLDGA--LMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
+ V G + + L + NE+ +L A + L L L HN + T++P+ GL
Sbjct: 200 SNANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLS 259
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNI 278
SL++L+IS+N L +L + L EL + N L L K H L L DL+ N +
Sbjct: 260 SLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQL 319
Query: 279 KAINI 283
+ ++
Sbjct: 320 TSHHV 324
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 74/274 (27%), Positives = 123/274 (44%)
Query: 21 QLGTLSKLQ-----LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 74
QL LS+L+ L + N E L S +L + + + L G +GL +L
Sbjct: 88 QLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKEL 147
Query: 75 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 134
++ N I + + ++ +L ++L N+I S L KL + + L+
Sbjct: 148 SELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEF-LGFSEKLC----AGSALSN- 201
Query: 135 LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMG 193
+ G L+T+D+S+N++ G ++++ + L LQHN I L AL G
Sbjct: 202 ANGAVSGGSELQTLDVSFNELRSLPDA-WGASRLRRLQT---LSLQHNNISTLAPNALAG 257
Query: 194 IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFV--- 250
+ L L++S+N L ++ + F G L+ L + N L E K L LE+L V
Sbjct: 258 LSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGN---DLYELPKGLLHRLEQLLVLDL 314
Query: 251 SHNSLT--RLDKD-FHGLPVLCKADLAHNNIKAI 281
S N LT +D F GL L +L++N + I
Sbjct: 315 SGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRI 348
>UNIPROTKB|A4D1F6 [details] [associations]
symbol:LRRD1 "Leucine-rich repeat and death
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] Pfam:PF00560
InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:CH236949 Gene3D:1.10.533.10 InterPro:IPR011029
EMBL:AC000120 InterPro:IPR025875 Pfam:PF12799 EMBL:BC026112
EMBL:BC144674 EMBL:BC144678 IPI:IPI00887636 IPI:IPI00935774
RefSeq:NP_001155000.1 UniGene:Hs.671729 ProteinModelPortal:A4D1F6
SMR:A4D1F6 PhosphoSite:A4D1F6 PRIDE:A4D1F6 Ensembl:ENST00000343318
Ensembl:ENST00000430130 Ensembl:ENST00000458448 GeneID:401387
KEGG:hsa:401387 UCSC:uc011khp.1 CTD:401387 GeneCards:GC07M091743
HGNC:HGNC:34300 neXtProt:NX_A4D1F6 HOVERGEN:HBG108705
InParanoid:A4D1F6 OMA:CNKFETF OrthoDB:EOG4K6G5V GenomeRNAi:401387
NextBio:106780 ArrayExpress:A4D1F6 Bgee:A4D1F6
Genevestigator:A4D1F6 Uniprot:A4D1F6
Length = 860
Score = 243 (90.6 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 83/279 (29%), Positives = 139/279 (49%)
Query: 5 LNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
+ +L+L+ N++K+ +G G L L++L +++N L +LPS+IQL L L ++N I+
Sbjct: 166 VKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLPSEIQLLHNLRILNVSHNHISH 225
Query: 64 LDGLLRGLTKL-QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
+ + L + Q+F + N I D + L NL+ +SL N++ + +L L L
Sbjct: 226 IPKEISQLGNIRQLFFYN-NYIENFPSD-LECLGNLEILSLGKNKLRHIPDTLPSLKTLR 283
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L +NQLT F + L +L ++DL+ N I+ +++ + N+ L + HN
Sbjct: 284 VLNLEYNQLTTFP-KALCFLPKLISLDLTGNLISSL------PKEIRELKNLETLLMDHN 336
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L + + + L L+ NKL IS L++L + NLL + E
Sbjct: 337 KLTFLAVEIFQLLKIKELQLADNKLEVIS-HKIENFRELRILILDKNLLKNIPEKISC-C 394
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
LE L +S N LT L K H L L K + NN+ I
Sbjct: 395 AMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKI 433
Score = 218 (81.8 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 80/336 (23%), Positives = 147/336 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L +++N + + ++ L ++ L N +E PSD++ L L N++
Sbjct: 210 LHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKL 269
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ L L L+V N+++NQ+T + L L S+ L N I+S+ + L L
Sbjct: 270 RHIPDTLPSLKTLRVLNLEYNQLTTFPK-ALCFLPKLISLDLTGNLISSLPKEIRELKNL 328
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L + HN+LT FL +I L +++ + L+ NK+ ++++ + L L
Sbjct: 329 ETLLMDHNKLT-FLAVEIFQLLKIKELQLADNKLEVIS------HKIENFRELRILILDK 381
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++N+ + L L LS NKL + P L++L+ L ++ N + + + +
Sbjct: 382 NLLKNIPEKISCCAMLECLSLSDNKLTEL-PKYIHKLNNLRKLHVNRNNMVKITDCI-SH 439
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLR 301
L + L S N +T + + + K +L++N I + L +N
Sbjct: 440 LNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGN-- 497
Query: 302 IYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETIC 337
Y+ PV D S + +E N I E C
Sbjct: 498 -YISEIPV--DISFSKQLLHLELSENKLLIFSEHFC 530
Score = 202 (76.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 79/297 (26%), Positives = 131/297 (44%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L N+L+ + L +L L++L +E NQL P + +L SL N I
Sbjct: 256 LGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLI 315
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+SL +R L L+ MD N++T + + FQ L + + L +N++ ++ + +L
Sbjct: 316 SSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLL-KIKELQLADNKLEVISHKIENFREL 374
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI----------NKFGTRNEGKNQVQGV 171
L L N L + + I L + LS NK+ N + +N + +
Sbjct: 375 RILILDKNLLKN-IPEKISCCAMLECLSLSDNKLTELPKYIHKLNNLRKLHVNRNNMVKI 433
Query: 172 T-------NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
T NI L+ N I ++ + + +++LS+NK+ P LDSL L
Sbjct: 434 TDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYF-PLGLCALDSLYYL 492
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
++ N ++ + +F L L +S N L + F L L DL N IK I
Sbjct: 493 SVNGNYISEIP-VDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKI 548
Score = 176 (67.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 82/318 (25%), Positives = 140/318 (44%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+ N+L +L L+ L + +NQ++ +P+ I L L N+ +
Sbjct: 515 LELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRE 574
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L LQV ++ NQ+ + D NL + ++ +NQ L L L L +S
Sbjct: 575 LCTLENLQVLDLSENQLQKISSD-ICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNIS 633
Query: 128 H---NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
+LT L ++ + +L+ +D+S N I + RN G+ + N+ L +N+I
Sbjct: 634 QIKGRKLTR-LPGELSNMTQLKELDISNNAIREI-PRNIGE-----LRNLVSLHAYNNQI 686
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN-LLTTLEETSKTFLP 243
L +L+ ++ L +L+LS N L T P + SLK ++ N LL E K
Sbjct: 687 SYLPPSLLSLNDLQQLNLSGNNL-TALPSAIYNIFSLKEINFDDNPLLRPPVEICKG--- 742
Query: 244 ALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGL-NSTLR 301
++L+ L R D +D L + K + NNI N + CQ L NS
Sbjct: 743 --KQLYTIARYLQRADERDEKILEKIFK--IVANNITETNFEFL----CQKLNLANSETD 794
Query: 302 IYLEGNPVLCDDSMRAVI 319
+ + L + + +A++
Sbjct: 795 MPTKSTVSLSERAHQALV 812
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 60/236 (25%), Positives = 110/236 (46%)
Query: 21 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG-LTKLQVFNM 79
QLG + + +E L+ P DI + LY + N+I + G G L L++ ++
Sbjct: 136 QLGLGADNFTVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSL 195
Query: 80 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 139
N ++ + E Q LHNL +++ +N I+ + +S L + L+ +N + F D+
Sbjct: 196 QENGLSSLP-SEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFP-SDL 253
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSR 199
L L + L NK+ + + + + L L++N++ AL + L
Sbjct: 254 ECLGNLEILSLGKNKLRHI------PDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLIS 307
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
LDL+ N + ++ P + L +L+ L + HN LT L L ++EL ++ N L
Sbjct: 308 LDLTGNLISSL-PKEIRELKNLETLLMDHNKLTFLAVEIFQLLK-IKELQLADNKL 361
Score = 166 (63.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 61/256 (23%), Positives = 110/256 (42%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L +L +N N + + + +L L + +N+L L L N+I
Sbjct: 486 LDSLYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQI 545
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ + + L V + N+ R E L NL + L NQ+ ++S + L +
Sbjct: 546 KKIPASISNMISLHVLILCCNKFETFPR-ELCTLENLQVLDLSENQLQKISSDICNLKGI 604
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L S NQ F ++ + L+ L +++S K K TR G ++ +T + EL + +
Sbjct: 605 QKLNFSSNQFIHFPIE-LCQLQSLEQLNISQIKGRKL-TRLPG--ELSNMTQLKELDISN 660
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N I + + + L L +N++ + P + L+ L+ L++S N LT L
Sbjct: 661 NAIREIPRNIGELRNLVSLHAYNNQISYLPPS-LLSLNDLQQLNLSGNNLTALPSAIYNI 719
Query: 242 LPALEELFVSHNSLTR 257
+L+E+ N L R
Sbjct: 720 F-SLKEINFDDNPLLR 734
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 64/279 (22%), Positives = 124/279 (44%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L +L L N++K + + + L +L++ N+ E P ++ L L + N++
Sbjct: 532 LINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQL 591
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
+ + L +Q N NQ + + Q+L L+ ++ ++T + LS +T
Sbjct: 592 QKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMT 651
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
+L L +S+N + E + +I L+ L ++ N+I+ N +Q +L L
Sbjct: 652 QLKELDISNNAIRE-IPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQ------QLNL 704
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N + L A+ I L ++ N L + P I ++ I+ L E K
Sbjct: 705 SGNNLTALPSAIYNIFSLKEINFDDNPL--LRPPVEI-CKGKQLYTIARYLQRADERDEK 761
Query: 240 TFLPALEELF-VSHNSLTRLDKDFHGLPVLC-KADLAHN 276
LE++F + N++T + +F LC K +LA++
Sbjct: 762 I----LEKIFKIVANNITETNFEF-----LCQKLNLANS 791
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 43/182 (23%), Positives = 80/182 (43%)
Query: 100 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+++L+ + + + + YLYL NQ+ F D L L + L N ++
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSL- 203
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
+++Q + N+ L + HN I ++ + + + +L +N + P D L
Sbjct: 204 -----PSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENF-PSDLECLG 257
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIK 279
+L++L + N L + +T + L L L + +N LT K LP L DL N I
Sbjct: 258 NLEILSLGKNKLRHIPDTLPS-LKTLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLIS 316
Query: 280 AI 281
++
Sbjct: 317 SL 318
>RGD|1308812 [details] [associations]
symbol:Mfhas1 "malignant fibrous histiocytoma amplified sequence
1" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 RGD:1308812
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
EMBL:CH473970 InterPro:IPR020859 PROSITE:PS51424
GeneTree:ENSGT00690000102098 CTD:9258 OrthoDB:EOG4CVG64
IPI:IPI00212019 RefSeq:NP_001100786.1 UniGene:Rn.106316
Ensembl:ENSRNOT00000015203 GeneID:306508 KEGG:rno:306508
UCSC:RGD:1308812 NextBio:656142 Uniprot:D3ZJL1
Length = 1046
Score = 244 (91.0 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 85/281 (30%), Positives = 137/281 (48%)
Query: 4 DLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRI 61
D+ L L NN L+ + LG+ L L++LV+ +N+ LP + +L L L ++NR+
Sbjct: 60 DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 119
Query: 62 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
T L ++ L +L+ N+ NQ+ + + L +L+ + + N++ + S S L
Sbjct: 120 TILGAEVVSALRELRKLNLSHNQLPALPA-QLGALAHLEELDVSFNRLAHLPDSFSCLNH 178
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L + HNQLT F + L L +D+S N++ G + + + + L L
Sbjct: 179 LRTLDVDHNQLTAFP-QQLLQLAALEELDVSSNRLR--GLPED----ISALRALKILWLS 231
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
E+ L + L L L +N L+ + PD+F L LKML++S NL EE
Sbjct: 232 GAELGTLPSGFCELASLESLMLDNNGLQAL-PDEFSRLQRLKMLNLSSNLF---EEFPAA 287
Query: 241 FLP--ALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIK 279
LP LEEL++S N LT + GL L L +N I+
Sbjct: 288 LLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIR 328
Score = 195 (73.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 62/235 (26%), Positives = 115/235 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L++N+L +L QLG L+ L+ L + N+L LP + L +L ++N++
Sbjct: 130 LRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQL 189
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T+ L L L+ ++ N++ + D L L + L ++ ++ S L L
Sbjct: 190 TAFPQQLLQLAALEELDVSSNRLRGLPED-ISALRALKILWLSGAELGTLPSGFCELASL 248
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N L + L D+ L+RL+ ++LS N +F + + + EL L
Sbjct: 249 ESLMLDNNGL-QALPDEFSRLQRLKMLNLSSNLFEEFPAA------LLPLAGLEELYLSR 301
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
N++ ++ + G+ L L L +N++R + PD + L L+ L + N + L +
Sbjct: 302 NQLTSVPSLIAGLGRLLTLWLDNNRIRYL-PDSIVELTGLEELVLQGNQIAVLPD 355
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L L+NN L++L + L +L++L + N E P+ + + L LY + N++
Sbjct: 245 LASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQL 304
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
TS+ L+ GL +L +D N+I + D L L+ + LQ NQI + + L+++
Sbjct: 305 TSVPSLIAGLGRLLTLWLDNNRIRYLP-DSIVELTGLEELVLQGNQIAVLPDNFGQLSRV 363
Query: 122 AYLYLSHNQLTE 133
+ N L +
Sbjct: 364 GLWKIKDNPLIQ 375
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/124 (34%), Positives = 57/124 (45%)
Query: 163 EGKNQVQGVTNIFELKLQHNEIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSL 221
EG G + L L+ N L A+ + H L+ LD+SHN+L + + L L
Sbjct: 76 EGLGSALGSLRV--LVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSALREL 133
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ L++SHN L L L LEEL VS N L L F L L D+ HN + A
Sbjct: 134 RKLNLSHNQLPALPAQLGA-LAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAF 192
Query: 282 NIQL 285
QL
Sbjct: 193 PQQL 196
>ZFIN|ZDB-GENE-110125-1 [details] [associations]
symbol:rxfp1 "relaxin/insulin-like family peptide
receptor 1" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 ZFIN:ZDB-GENE-110125-1 GO:GO:0016021
GO:GO:0004930 InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 CTD:59350 KO:K04306 EMBL:HM135955
IPI:IPI00969701 RefSeq:NP_001177863.1 UniGene:Dr.159212
ProteinModelPortal:D9IDV5 GeneID:100498669 KEGG:dre:100498669
Uniprot:D9IDV5
Length = 748
Score = 242 (90.2 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 71/210 (33%), Positives = 109/210 (51%)
Query: 30 LLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMV 87
++ +++N L L +D+ L + L LY +NRI S+ RGL L + +N+IT +
Sbjct: 127 MMSLQRNGLRKLNADMFLKYQSLQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYNRITTL 186
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRL 145
D FQ+LH L+ + L+NN + ++S + SGL L L L +N LT+ LDDI + RL
Sbjct: 187 LPDVFQDLHKLEWLILENNSLHHISSLTFSGLRSLVLLVLLNNALTK--LDDICLEMPRL 244
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSH 204
+D+ NK+ G + + L LQ N I + A + L LDLS
Sbjct: 245 NWLDIEGNKMETVGNVT-----FRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGELDLSS 299
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
N++ I PD F+ L L L+IS+N + L
Sbjct: 300 NRIEAIPPDLFVNLGDLLQLNISYNPIMNL 329
Score = 175 (66.7 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 52/210 (24%), Positives = 102/210 (48%)
Query: 76 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEF 134
+ ++ N + + D F +L + LQ+N+I S++ + GL L LYLS+N++T
Sbjct: 127 MMSLQRNGLRKLNADMFLKYQSLQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYNRITTL 186
Query: 135 LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGI 194
L D + L +L + L N ++ + G+ ++ L L +N + LD + +
Sbjct: 187 LPDVFQDLHKLEWLILENNSLHHISSLT-----FSGLRSLVLLVLLNNALTKLDDICLEM 241
Query: 195 HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNS 254
L+ LD+ NK+ T+ F + L +L + N ++ + + + L L EL +S N
Sbjct: 242 PRLNWLDIEGNKMETVGNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGELDLSSNR 301
Query: 255 LTRLDKD-FHGLPVLCKADLAHNNIKAINI 283
+ + D F L L + ++++N I + +
Sbjct: 302 IEAIPPDLFVNLGDLLQLNISYNPIMNLRV 331
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/160 (31%), Positives = 84/160 (52%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN-- 57
GL +L L+L+ NR+ +L + L KL+ L++E N L + S FS L SL
Sbjct: 169 GLYNLTRLYLSYNRITTLLPDVFQDLHKLEWLILENNSLHHISS--LTFSGLRSLVLLVL 226
Query: 58 -NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SL 115
NN +T LD + + +L +++ N++ V F++ + L + LQ N+I+ +++ +
Sbjct: 227 LNNALTKLDDICLEMPRLNWLDIEGNKMETVGNVTFRSCNMLTVLVLQRNRISRIHAQAF 286
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S L KL L LS N++ D L L +++SYN I
Sbjct: 287 SLLRKLGELDLSSNRIEAIPPDLFVNLGDLLQLNISYNPI 326
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 4 DLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRI 61
++ + L N L+ L + LQ L ++ N+++++ P + L LY + NRI
Sbjct: 124 NVTMMSLQRNGLRKLNADMFLKYQSLQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYNRI 183
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
T+L + + L KL+ ++ N + + F L +L + L NN +T ++ + +
Sbjct: 184 TTLLPDVFQDLHKLEWLILENNSLHHISSLTFSGLRSLVLLVLLNNALTKLDDICLEMPR 243
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L +L + N++ R L + L N+I++ + + G EL L
Sbjct: 244 LNWLDIEGNKMETVGNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLG-----ELDLS 298
Query: 181 HNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
N IE + L + + L +L++S+N + + D F L LK L I
Sbjct: 299 SNRIEAIPPDLFVNLGDLLQLNISYNPIMNLRVDHFDKLHKLKSLSI 345
Score = 139 (54.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 37/136 (27%), Positives = 74/136 (54%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHN 205
+++++ + + G R + ++ +L LQHN I+++ A G++ L+RL LS+N
Sbjct: 122 SINVTMMSLQRNGLRKLNADMFLKYQSLQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYN 181
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGL 265
++ T+ PD F L L+ L + +N L + + + L +L L + +N+LT+LD +
Sbjct: 182 RITTLLPDVFQDLHKLEWLILENNSLHHISSLTFSGLRSLVLLVLLNNALTKLDDICLEM 241
Query: 266 PVLCKADLAHNNIKAI 281
P L D+ N ++ +
Sbjct: 242 PRLNWLDIEGNKMETV 257
Score = 136 (52.9 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 35/130 (26%), Positives = 69/130 (53%)
Query: 5 LNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
LNWL + N+++++ + + L +LV+++N++ + + L +LG L ++NRI
Sbjct: 244 LNWLDIEGNKMETVGNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGELDLSSNRIE 303
Query: 63 SLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTK 120
++ L L L N+ +N I +R D F LH L S+S++ +I +++ + L
Sbjct: 304 AIPPDLFVNLGDLLQLNISYNPIMNLRVDHFDKLHKLKSLSIEGIEIGNIHRRMFEPLKN 363
Query: 121 LAYLYLSHNQ 130
L ++Y Q
Sbjct: 364 LTHIYFKKFQ 373
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 242 (90.2 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 97/354 (27%), Positives = 163/354 (46%)
Query: 5 LNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRI 61
L+ L +++ +K + LG LQ L + N L ++P + + S L L NN+I
Sbjct: 178 LHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKI 237
Query: 62 TSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+L GLT L + NQI+ + + F NL L+ + L N++ SL L++
Sbjct: 238 KALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQ 297
Query: 121 ---LAYLYLSHNQLTEFLLDD-IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L N L L + + G++ L +++L+ N I +N+ + + +
Sbjct: 298 CLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSI--QNKA---LANFSRLVS 352
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+HN+I+ L D A G+ L LDLS+N + IS L L +LD++HN L L
Sbjct: 353 LSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALT 412
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
LP+L EL ++ N ++ + ++ G L + N + Q
Sbjct: 413 SDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWLQES 472
Query: 295 GLNSTLRIY------LEGNPVLCD--DSMRAVIDAMETINNNTKIHGETICQPD 340
L+S+L LEG P+L +++ +D +E N N H ET+ +P+
Sbjct: 473 QLHSSLSASCVTPPRLEGAPLLQVPVETLSCDMDNVEKDNANIMQHLETLAKPN 526
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 59/215 (27%), Positives = 105/215 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GLT L +L L+NN++ S+ + L KL++L + N+L ++ SQ SL +
Sbjct: 247 GLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDL 306
Query: 60 RITSLDG-----LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS- 113
+ +L+G L G+ L+ N++ N I ++ N L S+SL++NQI +
Sbjct: 307 QANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDH 366
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
+ GL L L LS+N + ++ L RL +DL++N + + + + + +
Sbjct: 367 AFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTS-----DLIAPLPS 421
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKL 207
+ EL+L N+I + A+ G L L + N L
Sbjct: 422 LRELRLAGNDISIVARNAMDGARELESLQMQENPL 456
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 244 (91.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 77/278 (27%), Positives = 143/278 (51%)
Query: 8 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 66
L L NN+L ++ L L + +++N LE +P I L S L L NN ITS+
Sbjct: 296 LHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFIGL-SGLKHLVLANNHITSISS 354
Query: 67 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 124
L L L+ ++ N++ + + F +NL + L N+IT++N S + L L L
Sbjct: 355 ESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDL 414
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN-KFGTRNEGKNQVQGVTNIFELKLQHNE 183
LS+N+L+ + + L +L+ + L++N++ + T +G+ ++ L+L+ N+
Sbjct: 415 ELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWST-------FRGLESMKNLQLKSNK 467
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I L DG +H + +DL+ N++ ++S L L+ L++S N ++ +E + F
Sbjct: 468 IRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFT 527
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIK 279
+LE L +S+N++ + L L +LAHN ++
Sbjct: 528 QSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQ 565
Score = 237 (88.5 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 81/268 (30%), Positives = 137/268 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
LTDL L+NNRL +L ++ L++L+ L + NQLE S + + +L +N+
Sbjct: 411 LTDLE---LSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWSTFRGLESMKNLQLKSNK 467
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
I +L DG+ + K++ ++ NQI+ + R NL L ++L N I+ + T
Sbjct: 468 IRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFT 527
Query: 120 K-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+ L L LS+N + EF + L RL+T++L++N++ +N V N+ EL
Sbjct: 528 QSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQ-----ENTFDCVKNLEELN 582
Query: 179 LQHNE----IENLDGA--LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L+ N IE+ A G+ L RLDL N L+ IS GL++L++L++ N L
Sbjct: 583 LRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALA 642
Query: 233 TLEETSKTFLPALEEL-FVSHNSLTRLD 259
+++ + + L +L F S N + D
Sbjct: 643 SIQVNAFEHMLRLNKLVFKSLNFICDCD 670
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 88/322 (27%), Positives = 153/322 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANN 58
GL+ L L L NN + S+ + L L L+ L + +N+L + + + L L +
Sbjct: 335 GLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSF 394
Query: 59 NRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 114
N IT+++ L LT L++ N N+++ + F+NL+ L ++L NQ+ S+
Sbjct: 395 NEITNVNEHSFATLNNLTDLELSN---NRLSTLPIRVFKNLNQLKKLALNFNQLEINWST 451
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
GL + L L N++ L D + + ++ T+DL+ N+I+ +G + +T
Sbjct: 452 FRGLESMKNLQLKSNKIRA-LQDGVFYVMHKIETIDLAMNQISSLS--RQG---LFNLTK 505
Query: 174 IFELKLQHNEIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
+ L L N I ++ L LDLS+N + P L LK L+++HN L
Sbjct: 506 LRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQ 565
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD------FHGLPVLCKADLAHNNIKAINIQ-L 285
L+E + + LEEL + N L+ + +D F GL L + DL NN+K I+ + +
Sbjct: 566 YLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAM 625
Query: 286 ALKTQCQIFGLNSTLRIYLEGN 307
+ +I L S ++ N
Sbjct: 626 SGLNNLEILNLGSNALASIQVN 647
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 66/290 (22%), Positives = 126/290 (43%)
Query: 26 SKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 84
S +Q L + N+L + +I+ L + N + + + GL+ L+ + N I
Sbjct: 291 SYVQTLHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFI-GLSGLKHLVLANNHI 349
Query: 85 TMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 143
T + + L L ++ L N++ ++ +S L +L LS N++T L
Sbjct: 350 TSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLN 409
Query: 144 RLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLS 203
L ++LS N+++ R KN + + +L L N++E G+ + L L
Sbjct: 410 NLTDLELSNNRLSTLPIR-VFKN----LNQLKKLALNFNQLEINWSTFRGLESMKNLQLK 464
Query: 204 HNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-F 262
NK+R + F + ++ +D++ N +++L L L L +S N+++R++ D +
Sbjct: 465 SNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTW 524
Query: 263 HGLPVLCKADLAHNNIKAINIQ-LALKTQCQIFGLNSTLRIYLEGNPVLC 311
L DL++N I Q L + + L YL+ N C
Sbjct: 525 EFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDC 574
>UNIPROTKB|E1BKT3 [details] [associations]
symbol:Bt.110205 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0030056 "hemidesmosome" evidence=IEA] [GO:0016323
"basolateral plasma membrane" evidence=IEA] [GO:0006605 "protein
targeting" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] Pfam:PF00595 InterPro:IPR001611 InterPro:IPR001478
PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228 GO:GO:0005634
GO:GO:0005737 GO:GO:0006605 GO:GO:0016323 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030056
GeneTree:ENSGT00650000093182 OMA:HNNVRAN EMBL:DAAA02050134
EMBL:DAAA02050135 IPI:IPI00837830 Ensembl:ENSBTAT00000000533
Uniprot:E1BKT3
Length = 1460
Score = 244 (91.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 83/292 (28%), Positives = 138/292 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +N
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T + +L L+ L+ F MD N++T + +L L + + N I + +SG L
Sbjct: 197 TEVPEVLEQLSGLKEFWMDGNRLTFIP-GFIGSLKQLTYLDISKNNIEMVEEGISGCENL 255
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L + L + I LK + T+ + N++ + + G+ +I EL
Sbjct: 256 QDLLLSSNSLQQ-LPETIGSLKNVTTLKIDENQLMYL------PDSIGGLVSIEELDCSF 308
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL-DSLKMLDISHNLLTTLEETSKT 240
NE+E L ++ + + HN L+ + P+ IG ++ +L + N L TL E
Sbjct: 309 NELEALPSSIGQLTNIRTFAADHNYLQQLPPE--IGSWKNITVLFLHSNKLETLPEEMGD 366
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
+ L+ + +S N L L F L L L+ N K + I L +T +
Sbjct: 367 -MQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPL-IPLQKETDSE 416
Score = 204 (76.9 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 72/296 (24%), Positives = 129/296 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L LTKLQ+ + NQ+ M+ + L L+ + L +N+ T + L L+ L
Sbjct: 151 EFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
++ N+LT F+ I LK+L +D+S N I EG + G N+ +L L
Sbjct: 210 KEFWMDGNRLT-FIPGFIGSLKQLTYLDISKNNIEMV---EEG---ISGCENLQDLLLSS 262
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++ L + + ++ L + N+L + PD GL S++ LD S N L L +S
Sbjct: 263 NSLQQLPETIGSLKNVTTLKIDENQLMYL-PDSIGGLVSIEELDCSFNELEALP-SSIGQ 320
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L + HN L +L + + L N ++ + ++ + ++ L+
Sbjct: 321 LTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLS 376
Score = 204 (76.9 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 79/304 (25%), Positives = 132/304 (43%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L L + N L ALP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L V N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTVVEASVNPISKLP-DGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L NQL + L + L +L +DL N+ + E Q+ G+ E + N +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTEVP---EVLEQLSGLK---EFWMDGNRL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ G + + L+ LD+S N + + + G ++L+ L +S N L L ET + L
Sbjct: 220 TFIPGFIGSLKQLTYLDISKNNIEMVE-EGISGCENLQDLLLSSNSLQQLPETIGS-LKN 277
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYL 304
+ L + N L L GL + + D + N ++A+ + T + F + YL
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHN---YL 334
Query: 305 EGNP 308
+ P
Sbjct: 335 QQLP 338
Score = 136 (52.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G +L L L++N L+ L +G+L + L I++NQL LP I + L + N
Sbjct: 251 GCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNE 310
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ +L + LT ++ F D N + + E + N+ + L +N++ ++ + + K
Sbjct: 311 LEALPSSIGQLTNIRTFAADHNYLQQLP-PEIGSWKNITVLFLHSNKLETLPEEMGDMQK 369
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L + LS N+L + L++L + LS N+
Sbjct: 370 LKVINLSDNRLKNLPFSFTK-LQQLTAMWLSDNQ 402
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISP 212
NKF E N+V G + + E + D ++ H S DLS K I P
Sbjct: 811 NKF-PNVECINKVNGHSEETPQSPRRTEPHDTDSSVDVGHSKSTEDLSPQKSGPIGP 866
>MGI|MGI:1098644 [details] [associations]
symbol:Mfhas1 "malignant fibrous histiocytoma amplified
sequence 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1098644
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR020859 PROSITE:PS51424 HSSP:P07359
GeneTree:ENSGT00690000102098 EMBL:AC129082 EMBL:AC129211
EMBL:AK081646 EMBL:AK132349 EMBL:AK171731 IPI:IPI00669835
RefSeq:NP_001074748.1 UniGene:Mm.103246 ProteinModelPortal:Q3V1N1
SMR:Q3V1N1 STRING:Q3V1N1 PhosphoSite:Q3V1N1 PRIDE:Q3V1N1
Ensembl:ENSMUST00000037666 GeneID:52065 KEGG:mmu:52065
UCSC:uc009lla.1 CTD:9258 HOGENOM:HOG000113571 HOVERGEN:HBG108130
InParanoid:Q3V1N1 OMA:FFQRDAS OrthoDB:EOG4CVG64 ChiTaRS:MFHAS1
NextBio:308456 Bgee:Q3V1N1 Genevestigator:Q3V1N1 Uniprot:Q3V1N1
Length = 1048
Score = 242 (90.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 85/281 (30%), Positives = 137/281 (48%)
Query: 4 DLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRI 61
D+ L L NN L+ + LG+ L L++LV+ +N+ LP + +L L L ++NR+
Sbjct: 60 DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 119
Query: 62 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
T L ++ L +L+ N+ NQ+ + + L +L+ + + N++ + S S L
Sbjct: 120 TILGAEVVSALRELRKLNLSHNQLPALPA-QLGALAHLEELDVSFNRLAHLPDSFSCLNH 178
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L + HNQLT F + L L +D+S N++ G + + + + L L
Sbjct: 179 LRTLDVDHNQLTAFP-QQLLQLAALEELDVSSNRLR--GLPED----ISALRALKILWLS 231
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
E+ L + L L L +N L+ + PD+F L LKML++S NL EE
Sbjct: 232 GAELGTLPRGFCELASLESLMLDNNGLQAL-PDEFSRLQRLKMLNLSSNLF---EEFPAA 287
Query: 241 FLP--ALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIK 279
LP LEEL++S N LT + GL L L +N I+
Sbjct: 288 LLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIR 328
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 61/235 (25%), Positives = 114/235 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L++N+L +L QLG L+ L+ L + N+L LP + L +L ++N++
Sbjct: 130 LRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQL 189
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T+ L L L+ ++ N++ + D L L + L ++ ++ L L
Sbjct: 190 TAFPQQLLQLAALEELDVSSNRLRGLPED-ISALRALKILWLSGAELGTLPRGFCELASL 248
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L +N L + L D+ L+RL+ ++LS N +F + + + EL L
Sbjct: 249 ESLMLDNNGL-QALPDEFSRLQRLKMLNLSSNLFEEFPAA------LLPLAGLEELYLSR 301
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
N++ ++ + G+ L L L +N++R + PD + L L+ L + N + L +
Sbjct: 302 NQLTSVPSLIAGLGRLLTLWLDNNRIRYL-PDSIVELTGLEELVLQGNQIAVLPD 355
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L L+NN L++L + L +L++L + N E P+ + + L LY + N++
Sbjct: 245 LASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQL 304
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
TS+ L+ GL +L +D N+I + D L L+ + LQ NQI + + L+++
Sbjct: 305 TSVPSLIAGLGRLLTLWLDNNRIRYLP-DSIVELTGLEELVLQGNQIAVLPDNFGQLSRV 363
Query: 122 AYLYLSHNQLTE 133
+ N L +
Sbjct: 364 GLWKIKDNPLIQ 375
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/124 (34%), Positives = 57/124 (45%)
Query: 163 EGKNQVQGVTNIFELKLQHNEIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSL 221
EG G + L L+ N L A+ + H L+ LD+SHN+L + + L L
Sbjct: 76 EGLGSALGSLRV--LVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSALREL 133
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ L++SHN L L L LEEL VS N L L F L L D+ HN + A
Sbjct: 134 RKLNLSHNQLPALPAQLGA-LAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAF 192
Query: 282 NIQL 285
QL
Sbjct: 193 PQQL 196
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 79/287 (27%), Positives = 134/287 (46%)
Query: 4 DLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRI 61
+LN L + L SL L L+ L L + N+LE LPS + + L + N +
Sbjct: 98 NLNVLGFSGTMLTSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLL 157
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 119
+SL + RGL +L++ + N I + FQ L +L S+ LQ N++T + + L L
Sbjct: 158 SSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLV 217
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L+L N++ + + +++L+ + LS N+++ + + N+ L
Sbjct: 218 NLEVLHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPS-----GIFLNLPNLTHFSL 272
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N + L G L L L N L + + F L ++++L IS N + + +
Sbjct: 273 YDNRLSRLMPETFGPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAF 332
Query: 240 TFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
L L+E+ + N LT ++ F GLP L + +N IK I IQL
Sbjct: 333 NGLIELKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQL 379
Score = 228 (85.3 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/281 (28%), Positives = 135/281 (48%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
L ++N L L+ N L SL E L +L++L++++N ++ L S Q S L SL+ N
Sbjct: 144 LVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQN 203
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-G 117
+T + GL L L+V ++ N+I + + F + L + L +N+++ + S +
Sbjct: 204 ELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLN 263
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L L + L N+L+ L+ + G L+ + L N + T E +N +TNI L
Sbjct: 264 LPNLTHFSLYDNRLSR-LMPETFGPMALQELWLYDNLL----THLE-ENVFSNLTNIRLL 317
Query: 178 KLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
+ N I+ + GA G+ L + L N+L I P F GL +L + I +N + +
Sbjct: 318 VISRNRIQYISPGAFNGLIELKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPI 377
Query: 237 TSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+ L L + +NSL L KDF + + + H N
Sbjct: 378 QLLDGVSRLSLLEMQNNSLQNLPKDFLNTLSIVENVILHEN 418
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 82/290 (28%), Positives = 134/290 (46%)
Query: 28 LQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQIT 85
L +L L +LP ++ Q + L +L + N++ L LL L + ++ N ++
Sbjct: 99 LNVLGFSGTMLTSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLS 158
Query: 86 MVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEF---LLDDIRG 141
+ D F+ L L+ + LQ N I ++SS GL+ L L+L N+LT+ L DD+
Sbjct: 159 SLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVN 218
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRL 200
L+ L D NKI + N V + +L L N + L G + + L+
Sbjct: 219 LEVLHLQD---NKIEQLPA-----NLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHF 270
Query: 201 DLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK 260
L N+L + P+ F G +L+ L + NLLT LEE + L + L +S N + +
Sbjct: 271 SLYDNRLSRLMPETF-GPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISP 329
Query: 261 D-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV 309
F+GL L + L H N + NI+ + GL + I +E N +
Sbjct: 330 GAFNGLIELKEVSL-HTN-RLTNIEPGI-----FRGLPNLANISIENNQI 372
Score = 203 (76.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 72/256 (28%), Positives = 122/256 (47%)
Query: 28 LQLLVIEQNQLEAL-PSDIQLFSQLGSLY-ANNNRITSLDG-LLRGLTKLQVFNMDFNQI 84
+ LVI +++L PSD Q F++ +L+ A N+ IT ++ L V +
Sbjct: 50 INALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTML 109
Query: 85 TMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLK 143
T + + FQNL L +++L N++ + SSL + L + L LS N L+ D RGL
Sbjct: 110 TSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSEDAFRGLD 169
Query: 144 RLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLDL 202
+L + L N I + + + QG++++ L LQ NE+ ++ L + L L L
Sbjct: 170 QLEMLMLQRNSIKQLHS-----STFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHL 224
Query: 203 SHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDF 262
NK+ + + F + LK L +S N L+ L LP L + N L+RL +
Sbjct: 225 QDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPET 284
Query: 263 HGLPVLCKADLAHNNI 278
G P+ + ++N+
Sbjct: 285 FG-PMALQELWLYDNL 299
Score = 202 (76.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 60/226 (26%), Positives = 117/226 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL+ L LFL N L + G L L++L ++ N++E LP+++ +L LY ++
Sbjct: 191 GLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQKLKKLYLSS 250
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
NR++ L G+ L L F++ N+++ + + F + L + L +N +T + ++ S
Sbjct: 251 NRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPETFGPMA-LQELWLYDNLLTHLEENVFS 309
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
LT + L +S N++ GL L+ V L N++ N +G+ N+
Sbjct: 310 NLTNIRLLVISRNRIQYISPGAFNGLIELKEVSLHTNRLT-----NIEPGIFRGLPNLAN 364
Query: 177 LKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSL 221
+ +++N+I+ + L+ G+ LS L++ +N L+ + P DF+ S+
Sbjct: 365 ISIENNQIKQIPIQLLDGVSRLSLLEMQNNSLQNL-PKDFLNTLSI 409
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 67/262 (25%), Positives = 107/262 (40%)
Query: 51 LGSLYANNNRITSL--DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 108
+ +L +N I SL L +F + IT V F NL+ + +
Sbjct: 50 INALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTML 109
Query: 109 TSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQ 167
TS+ +L LT L L LS N+L + L + +DLS N ++ ++
Sbjct: 110 TSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLS-----EDA 164
Query: 168 VQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
+G+ + L LQ N I+ L + G+ L L L N+L I F L +L++L +
Sbjct: 165 FRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHL 224
Query: 227 SHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
N + L + L++L++S N L+ L F LP L L N + + +
Sbjct: 225 QDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPET 284
Query: 286 ALKTQCQIFGLNSTLRIYLEGN 307
Q L L +LE N
Sbjct: 285 FGPMALQELWLYDNLLTHLEEN 306
>MGI|MGI:1914394 [details] [associations]
symbol:Lrrc40 "leucine rich repeat containing 40"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914394 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104287 CTD:55631 HOGENOM:HOG000005761
HOVERGEN:HBG081930 OrthoDB:EOG4M65HK InterPro:IPR015766
PANTHER:PTHR23155:SF28 EMBL:AK011726 EMBL:AK017814 EMBL:AK034978
EMBL:AK163288 IPI:IPI00470138 RefSeq:NP_077156.2 UniGene:Mm.358704
ProteinModelPortal:Q9CRC8 SMR:Q9CRC8 STRING:Q9CRC8
PhosphoSite:Q9CRC8 PaxDb:Q9CRC8 PRIDE:Q9CRC8
Ensembl:ENSMUST00000072080 GeneID:67144 KEGG:mmu:67144
UCSC:uc008rvu.1 InParanoid:Q9CRC8 NextBio:323714 Bgee:Q9CRC8
CleanEx:MM_LRRC40 Genevestigator:Q9CRC8
GermOnline:ENSMUSG00000063052 Uniprot:Q9CRC8
Length = 602
Score = 238 (88.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 76/250 (30%), Positives = 132/250 (52%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
TDL L +++N+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISSNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLK 141
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
L + L L+ ++ N++T + + F++L L+ + L +N++ ++ + + L+ L
Sbjct: 142 ILPEEITSLKNLRTLHLQHNELTCIP-EGFEHLSCLEDLDLSSNRLATVPADFALLSSLL 200
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF----GTRNE------GKNQVQ--- 169
L LS NQL L +I +KRL+ +D N + G+ +N+++
Sbjct: 201 RLNLSSNQLKN-LPAEISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP 259
Query: 170 ---GVTNIFELKLQHNEIENLDGA--LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
+ EL L N+IE L GA L + + LDL NKLR++ P++ L SL+ L
Sbjct: 260 EFPSCRQLKELHLAENQIEKL-GAEHLQHLQAILVLDLRGNKLRSV-PEEMALLQSLERL 317
Query: 225 DISHNLLTTL 234
D+S+N +++L
Sbjct: 318 DLSNNDISSL 327
Score = 211 (79.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 76/282 (26%), Positives = 135/282 (47%)
Query: 28 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 87
L L+I N+L++L D++L L L ++N++TSL +R L LQ N+ N++ ++
Sbjct: 84 LTKLIISSNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKIL 143
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
+E +L NL ++ LQ+N++T + L+ L L LS N+L + D L L
Sbjct: 144 P-EEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLAT-VPADFALLSSLLR 201
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
++LS N++ ++ + + L N +E + + + L L L NKL
Sbjct: 202 LNLSSNQLKNLPA------EISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKL 255
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPV 267
R + P+ F LK L ++ N + L L A+ L + N L + ++ L
Sbjct: 256 RVL-PE-FPSCRQLKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQS 313
Query: 268 LCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV 309
L + DL++N+I ++ C + L+ + LEGNP+
Sbjct: 314 LERLDLSNNDISSL--------PCSLGNLHLKF-LALEGNPL 346
Score = 189 (71.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 59/233 (25%), Positives = 115/233 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L +++N+LK L ++ +L L+ L ++ N+L +P + S L L ++NR+
Sbjct: 127 LDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRL 186
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
++ L+ L N+ NQ+ + E + L + N + ++ + + L
Sbjct: 187 ATVPADFALLSSLLRLNLSSNQLKNLPA-EISRMKRLKHLDCDANLLETVPPDVGSMESL 245
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
LYL N+L +L + ++L+ + L+ N+I K G + +Q + I L L+
Sbjct: 246 ELLYLRRNKLR--VLPEFPSCRQLKELHLAENQIEKLGAEH-----LQHLQAILVLDLRG 298
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
N++ ++ + + L RLDLS+N + ++ P +G LK L + N L T+
Sbjct: 299 NKLRSVPEEMALLQSLERLDLSNNDISSL-PCS-LGNLHLKFLALEGNPLRTI 349
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/136 (31%), Positives = 69/136 (50%)
Query: 172 TNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
T++ +L + N++++L L + L+ LD+ N+L ++ P LD+L+ L++SHN L
Sbjct: 82 TDLTKLIISSNKLQSLSDDLRLLPALTVLDIHDNQLTSL-PSAIRELDNLQKLNVSHNKL 140
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQC 291
L E T L L L + HN LT + + F L L DL+ N + + AL
Sbjct: 141 KILPEEI-TSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFAL---- 195
Query: 292 QIFGLNSTLRIYLEGN 307
L+S LR+ L N
Sbjct: 196 ----LSSLLRLNLSSN 207
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 33/126 (26%), Positives = 61/126 (48%)
Query: 4 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
D+N F N+L + +L L KL L + N L +LP ++ ++L ++ + NR
Sbjct: 453 DINLSF---NKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKV 509
Query: 64 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 123
+L ++ L+ + NQ+ V + + + NL+++ LQNN + + L +L
Sbjct: 510 FPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQLRT 569
Query: 124 LYLSHN 129
L L N
Sbjct: 570 LLLDGN 575
>UNIPROTKB|F1PLN5 [details] [associations]
symbol:FMOD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GO:GO:0031012 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:2331 GeneTree:ENSGT00600000084286
KO:K08121 OMA:AQYDEDP PANTHER:PTHR24371:SF11 EMBL:AAEX03018217
RefSeq:XP_545677.2 Ensembl:ENSCAFT00000015038 GeneID:488560
KEGG:cfa:488560 Uniprot:F1PLN5
Length = 376
Score = 232 (86.7 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 82/248 (33%), Positives = 123/248 (49%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL---YLSHNQLTEFLLDD 138
NQI+ ++ F N L I+L NQITS +KL +L YL HN LT
Sbjct: 115 NQISSIQEGVFDNATGLLWIALHGNQITSDKVGRKIFSKLRHLERLYLDHNNLTRMPGPL 174
Query: 139 IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLS 198
R LK L L +N+I++ N ++G+ N+ L LQHNEI+ + A+ G+ L
Sbjct: 175 PRSLKELH---LDHNQISRVPN-----NALEGLENLTALYLQHNEIQEVGSAMRGLRSLI 226
Query: 199 RLDLSHNKLRTISPDDFIGLDS-LKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTR 257
LDLS+N LR + PD GL S L+ L + HN + ++ ++ P L + +SHNSLT
Sbjct: 227 LLDLSYNHLRKV-PD---GLPSALEQLYLEHNNVYSVPDSYFRGSPKLLYVRLSHNSLTN 282
Query: 258 LDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLR-IYLEGNPV--LCDDS 314
+GL A N+ + + L+ +I +N+ L +YL+GN + S
Sbjct: 283 -----NGL-----ASNTFNSSSLLELDLSYNQLQKIPPVNTNLENLYLQGNRINEFSISS 332
Query: 315 MRAVIDAM 322
V+D M
Sbjct: 333 FCTVVDVM 340
Score = 196 (74.1 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 72/263 (27%), Positives = 131/263 (49%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNR 60
+ +++ NN++ S+ EG + L + + NQ+ + ++FS+L L Y ++N
Sbjct: 107 MKYVYFQNNQISSIQEGVFDNATGLLWIALHGNQITSDKVGRKIFSKLRHLERLYLDHNN 166
Query: 61 ITSLDGLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
+T + G L R L +L ++D NQI+ V + + L NL ++ LQ+N+I + S++ GL
Sbjct: 167 LTRMPGPLPRSLKEL---HLDHNQISRVPNNALEGLENLTALYLQHNEIQEVGSAMRGLR 223
Query: 120 KLAYLYLSHNQLTEFLLDDIRGL-KRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L LS+N L + + D GL L + L +N N + + + +G + ++
Sbjct: 224 SLILLDLSYNHLRK--VPD--GLPSALEQLYLEHN--NVYSVPD---SYFRGSPKLLYVR 274
Query: 179 LQHNEIEN--LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L HN + N L L LDLS+N+L+ I P + +L+ L + N + E
Sbjct: 275 LSHNSLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVN----TNLENLYLQGNRIN--EF 328
Query: 237 TSKTFLPALEELFVSHNSLTRLD 259
+ +F ++ + S + RLD
Sbjct: 329 SISSFCTVVDVMNFSKLQVLRLD 351
Score = 169 (64.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 56/186 (30%), Positives = 92/186 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNR 60
L L L+L++N L + G L L+ L ++ NQ+ +P++ ++ L +LY +N
Sbjct: 154 LRHLERLYLDHNNLTRMPGPLPR--SLKELHLDHNQISRVPNNALEGLENLTALYLQHNE 211
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLT 119
I + +RGL L + ++ +N + V D + L+ + L++N + S+ +S G
Sbjct: 212 IQEVGSAMRGLRSLILLDLSYNHLRKVP-DGLPSA--LEQLYLEHNNVYSVPDSYFRGSP 268
Query: 120 KLAYLYLSHNQLTEF-LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
KL Y+ LSHN LT L + L +DLSYN++ K N TN+ L
Sbjct: 269 KLLYVRLSHNSLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVN---------TNLENLY 319
Query: 179 LQHNEI 184
LQ N I
Sbjct: 320 LQGNRI 325
Score = 141 (54.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 54/217 (24%), Positives = 95/217 (43%)
Query: 3 TDLNWLFLNNNRLKSLE-GQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L W+ L+ N++ S + G+ L L+ L ++ N L +P + L L+ ++N
Sbjct: 129 TGLLWIALHGNQITSDKVGRKIFSKLRHLERLYLDHNNLTRMPGPLP--RSLKELHLDHN 186
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+I+ + + L GL L + N+I V + L +L + L N + + L
Sbjct: 187 QISRVPNNALEGLENLTALYLQHNEIQEVG-SAMRGLRSLILLDLSYNHLRKVPDGLP-- 243
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+ L LYL HN + RG +L V LS+N + G + N +++ EL
Sbjct: 244 SALEQLYLEHNNVYSVPDSYFRGSPKLLYVRLSHNSLTNNGLASNTFNS----SSLLELD 299
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L +N+++ + L L L N++ S F
Sbjct: 300 LSYNQLQKIPPVNTN---LENLYLQGNRINEFSISSF 333
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL +L L+L +N ++ + + L L LL + N L +P + S L LY +N
Sbjct: 198 GLENLTALYLQHNEIQEVGSAMRGLRSLILLDLSYNHLRKVPDGLP--SALEQLYLEHNN 255
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+ S+ D RG KL + N +T + + F N +L + L NQ+ + ++
Sbjct: 256 VYSVPDSYFRGSPKLLYVRLSHNSLTNNGLASNTF-NSSSLLELDLSYNQLQKI-PPVN- 312
Query: 118 LTKLAYLYLSHNQLTEFLLD------DIRGLKRLRTVDLSYNKINK 157
T L LYL N++ EF + D+ +L+ + L N+I +
Sbjct: 313 -TNLENLYLQGNRINEFSISSFCTVVDVMNFSKLQVLRLDGNEIKR 357
Score = 116 (45.9 bits), Expect = 0.00052, P = 0.00052
Identities = 43/167 (25%), Positives = 80/167 (47%)
Query: 119 TKLAYLYLSHNQLT---EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+++ Y+Y +NQ++ E + D+ GL + L N+I + G+ + ++
Sbjct: 105 SRMKYVYFQNNQISSIQEGVFDNATGLL---WIALHGNQIT---SDKVGRKIFSKLRHLE 158
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L HN + + G L L L L HN++ + + GL++L L + HN + +
Sbjct: 159 RLYLDHNNLTRMPGPLP--RSLKELHLDHNQISRVPNNALEGLENLTALYLQHNEIQEVG 216
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLP-VLCKADLAHNNIKAI 281
+ L +L L +S+N L ++ GLP L + L HNN+ ++
Sbjct: 217 SAMRG-LRSLILLDLSYNHLRKVPD---GLPSALEQLYLEHNNVYSV 259
>FB|FBgn0038504 [details] [associations]
symbol:Sur-8 "Sur-8" species:7227 "Drosophila melanogaster"
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AE014297 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
OMA:LPHGIGN PANTHER:PTHR23155:SF38 ChiTaRS:SHOC2 EMBL:AY128499
EMBL:BT003235 RefSeq:NP_650620.3 RefSeq:NP_732231.2
UniGene:Dm.13957 ProteinModelPortal:Q9VEK6 SMR:Q9VEK6 STRING:Q9VEK6
PaxDb:Q9VEK6 PRIDE:Q9VEK6 EnsemblMetazoa:FBtr0083447
EnsemblMetazoa:FBtr0083448 EnsemblMetazoa:FBtr0333933 GeneID:42093
KEGG:dme:Dmel_CG5407 UCSC:CG5407-RA CTD:42093 FlyBase:FBgn0038504
InParanoid:Q8MQM0 OrthoDB:EOG4C867K PhylomeDB:Q9VEK6
GenomeRNAi:42093 NextBio:827133 Bgee:Q9VEK6 Uniprot:Q9VEK6
Length = 641
Score = 238 (88.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 78/295 (26%), Positives = 139/295 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L +N++ L ++G L L+ L + +N L +LP +Q SQL L +N++ +
Sbjct: 185 LTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEI 244
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L L + FN+IT V D+ + L NL +SL+ N+I + S++ L L L
Sbjct: 245 PPVIYRLRSLTTLYLRFNRITAVA-DDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 303
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI--------N-----KFGTRNEGKNQV--- 168
+SHN L E L +DI L +DL +N++ N + G R + V
Sbjct: 304 DVSHNHL-EHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPAT 362
Query: 169 -QGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
+ ++ E ++ N I L DG L + GL+ + LS N+ + ++ +++
Sbjct: 363 LKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINL 422
Query: 227 SHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
HN + + + L +L + N LT L D + + +LA N ++ +
Sbjct: 423 EHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKL 477
Score = 224 (83.9 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 70/250 (28%), Positives = 121/250 (48%)
Query: 28 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 87
++ L + ++ + +PS ++ L LY +N+I L + L L+ ++ N +T +
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
+ QN L + L++N++ + + L L LYL N++T + DD+R L L
Sbjct: 222 P-ESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-VADDLRQLVNLTM 279
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+ L NKI + G+ + + N+ L + HN +E+L + LS LDL HN+L
Sbjct: 280 LSLRENKIRELGSA------IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNEL 333
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLP 266
I PD L SL L + +N L+++ T K +++E V N +T+L D L
Sbjct: 334 LDI-PDSIGNLKSLVRLGMRYNRLSSVPATLKN-CKSMDEFNVEGNGITQLPDGMLASLS 391
Query: 267 VLCKADLAHN 276
L L+ N
Sbjct: 392 GLTTITLSRN 401
Score = 218 (81.8 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 77/310 (24%), Positives = 133/310 (42%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L +++N L+ L +G L L ++ N+L +P I L L NR+
Sbjct: 297 LVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRL 356
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
+S+ L+ + FN++ N IT + +L L +I+L NQ S + T
Sbjct: 357 SSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTN 416
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
+ + L HN++ + K L +++ N + + N+ EL L
Sbjct: 417 VYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPL------DIGTWVNMVELNLA 470
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N ++ L +M + L L LS+N L+ I P+ L L++LD+ N + L
Sbjct: 471 TNALQKLPDDIMNLQNLEILILSNNMLKKI-PNTIGNLRKLRILDLEENRIEVLPHEIG- 528
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTL 300
L L+ L + N +T L + L +L H ++ N+Q + +I L S
Sbjct: 529 LLHELQRLILQTNQITMLPRSIGHL-----GNLTHLSVSENNLQFLPE---EIGSLESLE 580
Query: 301 RIYLEGNPVL 310
+Y+ NP L
Sbjct: 581 NLYINQNPGL 590
Score = 214 (80.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 72/292 (24%), Positives = 134/292 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L+L NR+ ++ L L L +L + +N++ L S I L +L ++N +
Sbjct: 251 LRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHL 310
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + L ++ N++ + D NL +L + ++ N+++S+ ++L +
Sbjct: 311 EHLPEDIGNCVNLSALDLQHNELLDIP-DSIGNLKSLVRLGMRYNRLSSVPATLKNCKSM 369
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+ N +T+ + L L T+ LS N+ + T G Q TN++ + L+H
Sbjct: 370 DEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTG--GPAQF---TNVYSINLEH 424
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I+ + G GL++L++ N L T P D ++ L+++ N L L +
Sbjct: 425 NRIDKIPYGIFSRAKGLTKLNMKENML-TALPLDIGTWVNMVELNLATNALQKLPDDIMN 483
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
L LE L +S+N L ++ L L DL N I+ + ++ L + Q
Sbjct: 484 -LQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQ 534
Score = 208 (78.3 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 72/280 (25%), Positives = 131/280 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L N+++ L +G L L L + N LE LP DI L +L +N +
Sbjct: 274 LVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNEL 333
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
+ + L L M +N+++ V +N ++D +++ N IT + + L+ L+
Sbjct: 334 LDIPDSIGNLKSLVRLGMRYNRLSSVPAT-LKNCKSMDEFNVEGNGITQLPDGMLASLSG 392
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTRNEGKNQVQGVTNIFELK 178
L + LS NQ + + +++L +N+I+K +G + K G+T +L
Sbjct: 393 LTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAK----GLT---KLN 445
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
++ N + L + + L+L+ N L+ + PDD + L +L++L +S+N+L + T
Sbjct: 446 MKENMLTALPLDIGTWVNMVELNLATNALQKL-PDDIMNLQNLEILILSNNMLKKIPNTI 504
Query: 239 KTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
L L L + N + L + L L + L N I
Sbjct: 505 GN-LRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQI 543
Score = 174 (66.3 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 64/280 (22%), Positives = 122/280 (43%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
+ L L L +N+L + + L L L + N++ A+ D++ L L N+I
Sbjct: 229 SQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIR 288
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
L + L L ++ N + + D N NL ++ LQ+N++ + S+ L L
Sbjct: 289 ELGSAIGALVNLTTLDVSHNHLEHLPED-IGNCVNLSALDLQHNELLDIPDSIGNLKSLV 347
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L + +N+L+ LK +++D +N + G + ++ + + L N
Sbjct: 348 RLGMRYNRLSSVPAT----LKNCKSMD-EFN-VEGNGITQLPDGMLASLSGLTTITLSRN 401
Query: 183 EIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
+ + G + ++L HN++ I F L L++ N+LT L T+
Sbjct: 402 QFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTW 461
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ +E L ++ N+L +L D L L L++N +K I
Sbjct: 462 VNMVE-LNLATNALQKLPDDIMNLQNLEILILSNNMLKKI 500
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/124 (30%), Positives = 66/124 (53%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L+NN LK + +G L KL++L +E+N++E LP +I L +L L N+I
Sbjct: 484 LQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQI 543
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL-QNNQITSMNSSLSGLTK 120
T L + L L ++ N + + +E +L +L+++ + QN + + L+
Sbjct: 544 TMLPRSIGHLGNLTHLSVSENNLQFLP-EEIGSLESLENLYINQNPGLEKLPFELALCQN 602
Query: 121 LAYL 124
L YL
Sbjct: 603 LKYL 606
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/150 (28%), Positives = 73/150 (48%)
Query: 3 TDLNWLFLN--NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
T +N + LN N L+ L + L L++L++ N L+ +P+ I +L L NR
Sbjct: 460 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENR 519
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
I L + L +LQ + NQITM+ R +L NL +S+ N + + + L
Sbjct: 520 IEVLPHEIGLLHELQRLILQTNQITMLPRS-IGHLGNLTHLSVSENNLQFLPEEIGSLES 578
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 150
L LY++ N E L ++ + L+ +++
Sbjct: 579 LENLYINQNPGLEKLPFELALCQNLKYLNI 608
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 240 (89.5 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 90/306 (29%), Positives = 147/306 (48%)
Query: 3 TDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLF---SQLGSLYANN 58
T+++ ++L +N + ++ + TL L L + N + LP + LF ++L SL +N
Sbjct: 401 TNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLP--VTLFDKSTKLTSLSLDN 458
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N I L+ G+ R L L+ + N+I VRR F+ L +L + +Q N I + +
Sbjct: 459 NEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFH 518
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKR--LRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L + ++ L NQLT +L+DI + L +V L N ++K R + Q +
Sbjct: 519 TLENMQHINLQDNQLT--VLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQI--- 573
Query: 175 FELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+ L+ N++ ++ + L RL LS NK+R I D F+ L L+ LD+S N L
Sbjct: 574 --MWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQ 631
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
L L LEEL ++ N + ++ F L L DL+HN + +QL
Sbjct: 632 LRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPL----VQLTRDIFSN 687
Query: 293 IFGLNS 298
F LNS
Sbjct: 688 EFPLNS 693
Score = 223 (83.6 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 79/281 (28%), Positives = 132/281 (46%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNN 59
L L + L+NNR++ + G L LQ L I++N +E + P + + +N
Sbjct: 472 LEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDN 531
Query: 60 RITSLDGLLRGL-TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
++T L+ + + L ++ N + V F + + L++NQ+T + S
Sbjct: 532 QLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFAD 591
Query: 119 T-KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
T +L LYLS N++ + D L L+ +DLS N++ + R + +Q ++ EL
Sbjct: 592 TPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQL--RRDYFAPLQ---DLEEL 646
Query: 178 KLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L N IE ++G A + L LDLSHN L ++ D F L L++ + L LE+
Sbjct: 647 SLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQ 706
Query: 237 TSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+ L L EL + N L D +P L + L+HNN
Sbjct: 707 HAFKSLTNLNELNLERNQLNPADIQTLDIPNLRRLLLSHNN 747
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 94/324 (29%), Positives = 151/324 (46%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLF--SQLGSLYANNN 59
T+L L L +NRL + + + L+ + L + +N+L P I L+ S L SL N
Sbjct: 789 TNLVRLDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFPH-IALYNLSTLESLDLARN 847
Query: 60 RITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSG 117
++ S+D L G L+ + N+IT + NL LDS+ L N + S+ ++ L
Sbjct: 848 QLASIDFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRH 907
Query: 118 LTKLAYLYLSHN---QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L ++LS+N Q+ L D+ + RL ++L+ N IN+ T E + I
Sbjct: 908 SINLQKVHLSNNRFLQIPSSALSDV-SIPRLSWLNLTGNPINRIYTVKEERYPYLKELYI 966
Query: 175 FELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
+ L ++ + L L L +N++ ISP F L +L LD+S N L L
Sbjct: 967 CQTNLSILTSKDFEA----FQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEML 1022
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
+ L L L +SHN+L L++ L + DL+ N + I+ KT +
Sbjct: 1023 PKERLQGLRLLRFLNISHNTLKDLEEFSVDLLEMQTLDLSFNQLDRIS----KKTFRNLH 1078
Query: 295 GLNSTLRIYLEGN--PVLCDDSMR 316
GL L ++L GN VL +D+ R
Sbjct: 1079 GL---LELFLMGNRMTVLSNDAFR 1099
Score = 182 (69.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 67/261 (25%), Positives = 117/261 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFS-QLGSLYANN 58
G +L L L +N++ +L G L++L + + N L +LP++ S L ++ +N
Sbjct: 859 GTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSN 918
Query: 59 NRITSL------DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
NR + D + L+ L + N+I V+ + + L L Q N +
Sbjct: 919 NRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYLKEL--YICQTNLSILTS 976
Query: 113 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVT 172
L +L+L +N++T + L L T+DLS N++ K ++QG+
Sbjct: 977 KDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLP-----KERLQGLR 1031
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
+ L + HN +++L+ + + + LDLS N+L IS F L L L + N +T
Sbjct: 1032 LLRFLNISHNTLKDLEEFSVDLLEMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNRMT 1091
Query: 233 TLEETSKTFLPALEELFVSHN 253
L + FL L L + N
Sbjct: 1092 VLSNDAFRFLRKLHVLDLRKN 1112
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 77/295 (26%), Positives = 122/295 (41%)
Query: 31 LVIEQNQLEALPSDI--QLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMV 87
L + LEAL + + S L SL N ++T + L + KL + D+N+I V
Sbjct: 127 LQFSHSHLEALKDNSLRNVRSSLESLSIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRV 186
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK-LAYLYLSHNQLTEFLLDDIRGLKRL 145
F L + ++++ N++ M + +GL + + + +S N L F L +R L L
Sbjct: 187 DDYSFYGLR-ISKLNMKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTFPLMALRKLDHL 245
Query: 146 RTVDLSYNKINKF-GTRNEGKNQVQGVT---NIFELK------LQHNEIENLD-GALMGI 194
R + LS N+I F G N F+L L N+ +
Sbjct: 246 RILRLSNNRIPTFYGDIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAF 305
Query: 195 HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNS 254
L L N++ + P+ F L L LD+SHN + L+ L+ + +SHN
Sbjct: 306 PQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNH 365
Query: 255 LTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV 309
+ + F LP L + L+ NNI L L N + IYLE N +
Sbjct: 366 IHTIGGVFSNLPQLREVFLSENNI------LELPADAFTNSTNVDV-IYLESNAI 413
Score = 154 (59.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 51/216 (23%), Positives = 102/216 (47%)
Query: 24 TLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 82
+L +L L + N++ L P + +L ++ ++N I ++ G+ L +L+ + N
Sbjct: 328 SLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIGGVFSNLPQLREVFLSEN 387
Query: 83 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRG 141
I + D F N N+D I L++N I ++ ++ S L L +LYL N + +
Sbjct: 388 NILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDK 447
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRL 200
+L ++ L N+I + + ++ E++L +N I + G + L L
Sbjct: 448 STKLTSLSLDNNEIQDLEI-----GMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQEL 502
Query: 201 DLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
+ N + I P F L++++ +++ N LT LE+
Sbjct: 503 HIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLED 538
Score = 148 (57.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 68/286 (23%), Positives = 122/286 (42%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRIT 62
L +L L+ N+L+ L L L+ L + +N +EA+ L SL ++N +
Sbjct: 619 LQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLV 678
Query: 63 SLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + L N+ + + + F++L NL+ ++L+ NQ+ + + L
Sbjct: 679 QLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDIPNL 738
Query: 122 AYLYLSHNQLTEF--------LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
L LSHN + +LD +R L++L + S +I KN TN
Sbjct: 739 RRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLF---AKN-----TN 790
Query: 174 IFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
+ L L N + ++ + G++ L L N+L L +L+ LD++ N L
Sbjct: 791 LVRLDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLA 850
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFHG--LPVLCKADLAHN 276
+++ + L +L + N +T L F+ L L DL+ N
Sbjct: 851 SIDFFKLSGTLNLRQLILRDNKITALS-GFNAVNLTQLDSVDLSGN 895
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 62/288 (21%), Positives = 118/288 (40%)
Query: 8 LFLNNNRLKSL-EGQLGTLSK-LQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSL 64
L + NRL+ + E L + +Q + + +N L P ++ L L +NNRI +
Sbjct: 199 LNMKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTFPLMALRKLDHLRILRLSNNRIPTF 258
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAY 123
G ++ T N + FQ L +L + L +NQ + +L
Sbjct: 259 YGDIQLATN----NASAAAAAV---GAFQ-LPSLIFLDLSSNQFAEIGPDCFRAFPQLKT 310
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L NQ+ + + L+ L ++D+S+N+I + KN+ + + L HN
Sbjct: 311 LSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNK-----RLQTVDLSHNH 365
Query: 184 IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
I + G + L + LS N + + D F ++ ++ + N + ++ + L
Sbjct: 366 IHTIGGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLV 425
Query: 244 ALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQ 290
L+ L++ N + L F L L +N I+ + I + K +
Sbjct: 426 NLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLE 473
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 235 (87.8 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 85/317 (26%), Positives = 152/317 (47%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSL- 64
L L +N + ++ +LG L+ L L + QN +A D QL SL+ N++T L
Sbjct: 74 LLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLE 133
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAY 123
D GL LQ ++ NQ+ + F L NL + L +N + +++S L L
Sbjct: 134 DHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEI 193
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L + N++ L + R L LR++ L+ + R ++G+ ++ L N+
Sbjct: 194 LMIGGNKVDAILDMNFRPLANLRSLVLAGMNL-----REISDYALEGLQSLESLSFYDNQ 248
Query: 184 IENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH-NLLTTLEETSKTF 241
+ + AL + GL LDL+ N L+ + P DF + LK L +++ L ++++ +
Sbjct: 249 LARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVN 308
Query: 242 LPALEELFVSHNS-LTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNST 299
LP L +L +++N L+ + + FH LP + L +N + A++ Q + L +
Sbjct: 309 LPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQT-------VESLPNL 361
Query: 300 LRIYLEGNPVLCDDSMR 316
+ L GNP+ CD +R
Sbjct: 362 QEVGLHGNPIRCDCVIR 378
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 75/268 (27%), Positives = 128/268 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNN 59
L L L L N+L LE L+ LQ L + NQL + P S L L+ N+N
Sbjct: 116 LPQLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSN 175
Query: 60 RITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSG 117
+ ++D L L++ + N++ + F+ L NL S+ L + ++ +L G
Sbjct: 176 LLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEG 235
Query: 118 LTKLAYLYLSHNQLTEF---LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L L L NQL L+ + GLK L DL+ N + + G + ++
Sbjct: 236 LQSLESLSFYDNQLARVPRRALEQVPGLKFL---DLNKNPLQRVGP-----GDFANMLHL 287
Query: 175 FELKLQH-NEIENLDG-ALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLL 231
EL L + E+ ++D AL+ + L++LD+++N +L I P F L ++ L +++N L
Sbjct: 288 KELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNAL 347
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRLD 259
+ L + + LP L+E+ + H + R D
Sbjct: 348 SALHQQTVESLPNLQEVGL-HGNPIRCD 374
Score = 183 (69.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 86/312 (27%), Positives = 139/312 (44%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQ 93
L A+P + +Q +L +N I +D G L LT+L + F+ R +F
Sbjct: 60 LTAVPPALPAGTQ--TLLLQSNSIVRVDQSELGYLANLTELDLSQNSFSD---ARDCDFH 114
Query: 94 NLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 152
L L S+ L+ NQ+T + S +GL L LYL+HNQL GL L + L+
Sbjct: 115 ALPQLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNS 174
Query: 153 NKINKFGTRNEGKNQVQGVTNIFELKLQHNEIEN-LDGALMGIHGLSRLDLSHNKLRTIS 211
N + +R + + N+ L + N+++ LD + L L L+ LR IS
Sbjct: 175 NLLRAIDSR-----WFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREIS 229
Query: 212 PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCK 270
GL SL+ L N L + + +P L+ L ++ N L R+ DF + L
Sbjct: 230 DYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANM--LHL 287
Query: 271 ADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAV--IDAMETI--N 326
+L NN++ +L + + L ++ + NP L RA + MET+ N
Sbjct: 288 KELGLNNME----ELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLN 343
Query: 327 NN--TKIHGETI 336
NN + +H +T+
Sbjct: 344 NNALSALHQQTV 355
>UNIPROTKB|E7EQW9 [details] [associations]
symbol:ERBB2IP "Protein LAP2" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IDA] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 GO:GO:0005886 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 EMBL:AC010359 EMBL:AC025442
RefSeq:NP_001240630.1 UniGene:Hs.597241 UniGene:Hs.731734
UniGene:Hs.740465 GeneID:55914 KEGG:hsa:55914 CTD:55914
HGNC:HGNC:15842 KO:K12796 ChiTaRS:ERBB2IP GenomeRNAi:55914
IPI:IPI00966557 ProteinModelPortal:E7EQW9 SMR:E7EQW9
Ensembl:ENST00000511297 UCSC:uc003jul.2 ArrayExpress:E7EQW9
Bgee:E7EQW9 Uniprot:E7EQW9
Length = 1367
Score = 238 (88.8 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 82/292 (28%), Positives = 137/292 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +N
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T + +L L+ L+ F MD N++T + +L L + + N I + +S L
Sbjct: 197 TEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQLTYLDVSKNNIEMVEEGISTCENL 255
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L + L + I LK + T+ + N++ + + G+ ++ EL
Sbjct: 256 QDLLLSSNSLQQ-LPETIGSLKNITTLKIDENQLMYL------PDSIGGLISVEELDCSF 308
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL-DSLKMLDISHNLLTTLEETSKT 240
NE+E L ++ + L HN L+ + P+ IG ++ +L + N L TL E
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPE--IGSWKNITVLFLHSNKLETLPEEMGD 366
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
+ L+ + +S N L L F L L L+ N K + I L +T +
Sbjct: 367 -MQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPL-IPLQKETDSE 416
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 71/296 (23%), Positives = 128/296 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L LTKLQ+ + NQ+ M+ + L L+ + L +N+ T + L L+ L
Sbjct: 151 EFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
++ N+LT F+ I LK+L +D+S N I EG + N+ +L L
Sbjct: 210 KEFWMDANRLT-FIPGFIGSLKQLTYLDVSKNNIEMV---EEG---ISTCENLQDLLLSS 262
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++ L + + ++ L + N+L + PD GL S++ LD S N + L +S
Sbjct: 263 NSLQQLPETIGSLKNITTLKIDENQLMYL-PDSIGGLISVEELDCSFNEVEALP-SSIGQ 320
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L L HN L +L + + L N ++ + ++ + ++ L+
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLS 376
Score = 190 (71.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKLP-DGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L NQL + L + L +L +DL N+ + E Q+ G+ E + N +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTEVP---EVLEQLSGLK---EFWMDANRL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ G + + L+ LD+S N + + + ++L+ L +S N L L ET + L
Sbjct: 220 TFIPGFIGSLKQLTYLDVSKNNIEMVE-EGISTCENLQDLLLSSNSLQQLPETIGS-LKN 277
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYL 304
+ L + N L L GL + + D + N ++A+ + T + F + YL
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN---YL 334
Query: 305 EGNP 308
+ P
Sbjct: 335 QQLP 338
>UNIPROTKB|Q96RT1 [details] [associations]
symbol:ERBB2IP "Protein LAP2" species:9606 "Homo sapiens"
[GO:0006605 "protein targeting" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005200 "structural constituent of
cytoskeleton" evidence=NAS] [GO:0007155 "cell adhesion"
evidence=NAS] [GO:0030056 "hemidesmosome" evidence=IDA] [GO:0005178
"integrin binding" evidence=IPI] [GO:0016049 "cell growth"
evidence=NAS] [GO:0007049 "cell cycle" evidence=NAS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045175 "basal
protein localization" evidence=NAS] [GO:0045197 "establishment or
maintenance of epithelial cell apical/basal polarity" evidence=NAS]
[GO:0009925 "basal plasma membrane" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0045104 "intermediate filament
cytoskeleton organization" evidence=NAS] [GO:0007229
"integrin-mediated signaling pathway" evidence=NAS] [GO:0005176
"ErbB-2 class receptor binding" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA;TAS] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 GO:GO:0005634 GO:GO:0005737
GO:GO:0006605 Reactome:REACT_111102 GO:GO:0007173 GO:GO:0005200
GO:GO:0016049 GO:GO:0031965 eggNOG:COG4886 GO:GO:0007155
GO:GO:0007049 GO:GO:0007229 SUPFAM:SSF50156 GO:GO:0005604
InterPro:IPR025875 Pfam:PF12799 GO:GO:0009925 GO:GO:0030056
GO:GO:0045104 GO:GO:0005176 GO:GO:0045197 GO:GO:0045175 PDB:1MFG
PDB:1MFL PDBsum:1MFG PDBsum:1MFL EMBL:AF263744 EMBL:AF276423
EMBL:AB033051 EMBL:AK001180 EMBL:AK304693 EMBL:AC010359
EMBL:AC025442 EMBL:BC050692 EMBL:BC115012 EMBL:BC126464
EMBL:BC144075 IPI:IPI00438286 IPI:IPI00438287 IPI:IPI00438288
IPI:IPI00438289 IPI:IPI00438290 IPI:IPI00438291 IPI:IPI00438292
RefSeq:NP_001006600.1 RefSeq:NP_001240626.1 RefSeq:NP_001240627.1
RefSeq:NP_001240628.1 RefSeq:NP_001240630.1 RefSeq:NP_061165.1
UniGene:Hs.597241 UniGene:Hs.731734 UniGene:Hs.740465 PDB:1N7T
PDB:2H3L PDB:2QBW PDB:3CH8 PDBsum:1N7T PDBsum:2H3L PDBsum:2QBW
PDBsum:3CH8 ProteinModelPortal:Q96RT1 SMR:Q96RT1 IntAct:Q96RT1
MINT:MINT-199447 STRING:Q96RT1 PhosphoSite:Q96RT1 DMDM:116242614
PaxDb:Q96RT1 PRIDE:Q96RT1 Ensembl:ENST00000284037
Ensembl:ENST00000380935 Ensembl:ENST00000380936
Ensembl:ENST00000380938 Ensembl:ENST00000380939
Ensembl:ENST00000380943 Ensembl:ENST00000506030
Ensembl:ENST00000508515 GeneID:55914 KEGG:hsa:55914 UCSC:uc003jui.2
UCSC:uc003juj.2 UCSC:uc003juk.2 UCSC:uc011cqy.2 CTD:55914
GeneCards:GC05P065258 HGNC:HGNC:15842 HPA:HPA048606 MIM:606944
neXtProt:NX_Q96RT1 PharmGKB:PA27845 HOGENOM:HOG000060229
HOVERGEN:HBG052305 InParanoid:Q96RT1 KO:K12796 OMA:HNNVRAN
OrthoDB:EOG41JZBG PhylomeDB:Q96RT1 ChiTaRS:ERBB2IP
EvolutionaryTrace:Q96RT1 GenomeRNAi:55914 NextBio:61305
ArrayExpress:Q96RT1 Bgee:Q96RT1 CleanEx:HS_ERBB2IP
Genevestigator:Q96RT1 GermOnline:ENSG00000112851 Uniprot:Q96RT1
Length = 1412
Score = 238 (88.8 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 82/292 (28%), Positives = 137/292 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +N
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T + +L L+ L+ F MD N++T + +L L + + N I + +S L
Sbjct: 197 TEVPEVLEQLSGLKEFWMDANRLTFIP-GFIGSLKQLTYLDVSKNNIEMVEEGISTCENL 255
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L + L + I LK + T+ + N++ + + G+ ++ EL
Sbjct: 256 QDLLLSSNSLQQ-LPETIGSLKNITTLKIDENQLMYL------PDSIGGLISVEELDCSF 308
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL-DSLKMLDISHNLLTTLEETSKT 240
NE+E L ++ + L HN L+ + P+ IG ++ +L + N L TL E
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPE--IGSWKNITVLFLHSNKLETLPEEMGD 366
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
+ L+ + +S N L L F L L L+ N K + I L +T +
Sbjct: 367 -MQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPL-IPLQKETDSE 416
Score = 195 (73.7 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 71/296 (23%), Positives = 128/296 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L LTKLQ+ + NQ+ M+ + L L+ + L +N+ T + L L+ L
Sbjct: 151 EFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
++ N+LT F+ I LK+L +D+S N I EG + N+ +L L
Sbjct: 210 KEFWMDANRLT-FIPGFIGSLKQLTYLDVSKNNIEMV---EEG---ISTCENLQDLLLSS 262
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++ L + + ++ L + N+L + PD GL S++ LD S N + L +S
Sbjct: 263 NSLQQLPETIGSLKNITTLKIDENQLMYL-PDSIGGLISVEELDCSFNEVEALP-SSIGQ 320
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L L HN L +L + + L N ++ + ++ + ++ L+
Sbjct: 321 LTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLS 376
Score = 190 (71.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKLP-DGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L NQL + L + L +L +DL N+ + E Q+ G+ E + N +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTEVP---EVLEQLSGLK---EFWMDANRL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ G + + L+ LD+S N + + + ++L+ L +S N L L ET + L
Sbjct: 220 TFIPGFIGSLKQLTYLDVSKNNIEMVE-EGISTCENLQDLLLSSNSLQQLPETIGS-LKN 277
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYL 304
+ L + N L L GL + + D + N ++A+ + T + F + YL
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHN---YL 334
Query: 305 EGNP 308
+ P
Sbjct: 335 QQLP 338
>MGI|MGI:1915557 [details] [associations]
symbol:Lrriq4 "leucine-rich repeats and IQ motif containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000048 PROSITE:PS50096
PROSITE:PS51450 SMART:SM00015 MGI:MGI:1915557 eggNOG:COG4886
GeneTree:ENSGT00700000104287 EMBL:AK015024 EMBL:BC145806
IPI:IPI00134786 IPI:IPI00831402 RefSeq:NP_080944.2
UniGene:Mm.389425 ProteinModelPortal:A6H6A4 SMR:A6H6A4 PRIDE:A6H6A4
Ensembl:ENSMUST00000108265 Ensembl:ENSMUST00000108267
Ensembl:ENSMUST00000172350 GeneID:68307 KEGG:mmu:68307
UCSC:uc008ovc.1 UCSC:uc008ovd.1 CTD:344657 HOGENOM:HOG000113384
HOVERGEN:HBG076273 InParanoid:A6H6A4 OMA:CAEGNEA OrthoDB:EOG49P9Z8
NextBio:326967 Bgee:A6H6A4 Genevestigator:A6H6A4 Uniprot:A6H6A4
Length = 596
Score = 233 (87.1 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 87/334 (26%), Positives = 152/334 (45%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
T L ++L N + L L L+++ +++N+L+++P DI +L Y +N +
Sbjct: 201 TKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLM 260
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
SL L +KL V ++ N I + + L L + L N++ + L L
Sbjct: 261 SLPESLSQCSKLSVLDLTHNSIHSLP-SSLELLTELTEVGLSGNRLEKVPRLLCSWVSLH 319
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
LYL + L L D + L LR +DLS N I F Q+ + N+ L L N
Sbjct: 320 LLYLRNTSL-HGLRDSFKRLINLRFLDLSQNHIEHFPV------QICALKNLEILALDDN 372
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL---LTTLEETSK 239
++ L ++ + L L L+ N L + P++ L SL+ L I + L++L E K
Sbjct: 373 KVRQLPPSISLLSNLKILGLTGNDLLSF-PEEIFSLISLEKLYIGQDQGSKLSSLPENIK 431
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNST 299
+ L+EL++ +N L +L +P L D HN +K + + C+ L
Sbjct: 432 RLMN-LKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLPDAI-----CRTRNLREL 485
Query: 300 LRIYLEGNPVLC-DDSMRAVIDA-METINNNTKI 331
L LE N + C +++ +++ + T+ NN +
Sbjct: 486 L---LEDNLLCCLPENLDHLVNLKVLTLMNNPMV 516
Score = 204 (76.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 75/261 (28%), Positives = 122/261 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L + L+ N+LKS+ G +G L +LQ + N L +LP + S+L L +N I
Sbjct: 223 LYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHNSI 282
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRR--DEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
SL L LT+L + N++ V R + +LH L L+N + + S L
Sbjct: 283 HSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLL---YLRNTSLHGLRDSFKRLI 339
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L +L LS N + F + I LK L + L NK+ + + ++N+ L L
Sbjct: 340 NLRFLDLSQNHIEHFPVQ-ICALKNLEILALDDNKVRQLPP------SISLLSNLKILGL 392
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTIS--PDDFIGLDSLKMLDISHNLLTTLEET 237
N++ + + + L +L + ++ +S P++ L +LK L I +N L L
Sbjct: 393 TGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLP-A 451
Query: 238 SKTFLPALEELFVSHNSLTRL 258
S +P LE L HN L +L
Sbjct: 452 SLGLMPNLEVLDCRHNLLKQL 472
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 62/261 (23%), Positives = 120/261 (45%)
Query: 2 LTDLNWLFLNNNR-LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
LTD + +N+ LK++ ++ L +L+ + +E NQ+ +P IQ LY +NN
Sbjct: 59 LTDRTFFIDGSNQGLKTIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNS 118
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 119
+ L L L+ L+ ++ N + + L L + L +T + + + L
Sbjct: 119 LQDLCPELGALSSLESLDLSGNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLH 178
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L LS N L E L ++I +LR + L N F + + N+ + L
Sbjct: 179 HLELFGLSENFL-ESLPEEIVNQTKLREIYLKQNHFEVFPC------DLCVLYNLEVIDL 231
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N+++++ G + + L + ++ N L ++ P+ L +LD++HN + +L +S
Sbjct: 232 DENKLKSIPGDIGHLVRLQKFYVASNHLMSL-PESLSQCSKLSVLDLTHNSIHSLP-SSL 289
Query: 240 TFLPALEELFVSHNSLTRLDK 260
L L E+ +S N L ++ +
Sbjct: 290 ELLTELTEVGLSGNRLEKVPR 310
Score = 153 (58.9 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 64/267 (23%), Positives = 117/267 (43%)
Query: 46 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 105
QL + + +N + ++ + L +L+ +++ NQI + + Q L N + L N
Sbjct: 58 QLTDRTFFIDGSNQGLKTIPSEILALKELEEVHLENNQIAEIPQG-IQQLQNTKVLYLHN 116
Query: 106 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 165
N + + L L+ L L LS N L ++ + + RLRT L ++ + G
Sbjct: 117 NSLQDLCPELGALSSLESLDLSGNPL---VISSLHVVSRLRT--LRELRLYRTGLTEIPT 171
Query: 166 NQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLD 225
+ + ++ L N +E+L ++ L + L N + P D L +L+++D
Sbjct: 172 GICKSLHHLELFGLSENFLESLPEEIVNQTKLREIYLKQNHFE-VFPCDLCVLYNLEVID 230
Query: 226 ISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQL 285
+ N L ++ L L++ +V+ N L L + L DL HN+I ++ L
Sbjct: 231 LDENKLKSIPGDIG-HLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHNSIHSLPSSL 289
Query: 286 ALKTQCQIFGLNSTLRIYLEGNP-VLC 311
L T+ GL+ LE P +LC
Sbjct: 290 ELLTELTEVGLSGNR---LEKVPRLLC 313
>UNIPROTKB|J3KS54 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR003591 SMART:SM00369
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 EMBL:AC127537 HGNC:HGNC:3750
ChiTaRS:FLII ProteinModelPortal:J3KS54 Ensembl:ENST00000578558
Uniprot:J3KS54
Length = 700
Score = 234 (87.4 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 87/283 (30%), Positives = 135/283 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+T L WL LN L L +L L KL+ L + N L L ++ L ++ A N +
Sbjct: 32 MTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSL 91
Query: 62 TSL---DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+ D + + L L V ++ NQ+T R E +N N+ ++L +N I ++ N
Sbjct: 92 KNSGVPDDIFK-LDDLSVLDLSHNQLTECPR-ELENAKNMLVLNLSHNSIDTIPNQLFIN 149
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
LT L YL LS N+L E L +R L L+T+ L+ N + R Q+ +T + L
Sbjct: 150 LTDLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLR-----QLPAMTALQTL 203
Query: 178 KLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L+ + NL +L G+ L+ +DLS N L + P+ L SL+ L++S N +T L
Sbjct: 204 HLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV-PECLYTLPSLRRLNLSSNQITELS 262
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
++ +E L +S N LT L L L K L N +
Sbjct: 263 LCIDQWVH-VETLNLSRNQLTSLPSAICKLSKLKKLYLNSNKL 304
Score = 226 (84.6 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 72/269 (26%), Positives = 133/269 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--ALPSDIQLFSQLGSLYANNN 59
L L L +++N L +L G+L +L L+ +V N L+ +P DI L L ++N
Sbjct: 55 LQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHN 114
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++T L + V N+ N I + F NL +L + L N++ S+ + L
Sbjct: 115 QLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLESLPPQMRRLV 174
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ N L L + + L+T+ L + T++ ++G++N+ ++ L
Sbjct: 175 HLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQ----RTQSNLPTSLEGLSNLADVDL 230
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISP--DDFIGLDSLKMLDISHNLLTTLEET 237
N++ + L + L RL+LS N++ +S D ++ +++L ++S N LT+L +
Sbjct: 231 SCNDLTRVPECLYTLPSLRRLNLSSNQITELSLCIDQWVHVETL---NLSRNQLTSLP-S 286
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLP 266
+ L L++L+++ N L DF GLP
Sbjct: 287 AICKLSKLKKLYLNSNKL-----DFDGLP 310
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 63/246 (25%), Positives = 114/246 (46%)
Query: 42 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
P +++ + L L N + L L L KL+ ++ N +T + E +L +L +I
Sbjct: 26 PENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAI 84
Query: 102 SLQNNQI--TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ N + + + + L L+ L LSHNQLTE ++ K + ++LS+N I+
Sbjct: 85 VARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTE-CPRELENAKNMLVLNLSHNSIDTI- 142
Query: 160 TRNEGKNQVQ-GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
NQ+ +T++ L L N +E+L + + L L L+ N L +
Sbjct: 143 -----PNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAM 197
Query: 219 DSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+L+ L + T TS L L ++ +S N LTR+ + + LP L + +L+ N
Sbjct: 198 TALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPSLRRLNLSSNQ 257
Query: 278 IKAINI 283
I +++
Sbjct: 258 ITELSL 263
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 72/314 (22%), Positives = 132/314 (42%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L L + N LK+ + + L L +L + NQL P +++ + L ++N
Sbjct: 78 LPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTECPRELENAKNMLVLNLSHN 137
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I ++ L LT L ++ N++ + + + L +L ++ L N + L
Sbjct: 138 SIDTIPNQLFINLTDLLYLDLSENRLESLP-PQMRRLVHLQTLVLNGNPLLHAQLRQLPA 196
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+T L L+L Q T+ L + GL L VDLS N + + + + ++
Sbjct: 197 MTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV------PECLYTLPSLRR 250
Query: 177 LKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I L + +H + L+LS N+L ++ P L LK L ++ N L
Sbjct: 251 LNLSSNQITELSLCIDQWVH-VETLNLSRNQLTSL-PSAICKLSKLKKLYLNSNKLDFDG 308
Query: 236 ETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
S L LEE ++N+L + + P L K L N++ + + T+ ++
Sbjct: 309 LPSGIGKLTNLEEFMAANNNLELVPESLCRCPKLRKLVLNKNHLVTLPEAIHFLTEIEVL 368
Query: 295 GLNSTLRIYLEGNP 308
+ + + P
Sbjct: 369 DVRENPNLVMPPKP 382
>FB|FBgn0263289 [details] [associations]
symbol:scrib "scribbled" species:7227 "Drosophila
melanogaster" [GO:0042048 "olfactory behavior" evidence=IMP]
[GO:0006963 "positive regulation of antibacterial peptide
biosynthetic process" evidence=IMP] [GO:0005918 "septate junction"
evidence=NAS;IDA;TAS] [GO:0016335 "morphogenesis of larval imaginal
disc epithelium" evidence=IMP] [GO:0016336 "establishment or
maintenance of polarity of larval imaginal disc epithelium"
evidence=IMP] [GO:0016333 "morphogenesis of follicular epithelium"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0016327 "apicolateral plasma membrane" evidence=IDA]
[GO:0016328 "lateral plasma membrane" evidence=IDA] [GO:0016332
"establishment or maintenance of polarity of embryonic epithelium"
evidence=TAS] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=TAS] [GO:0016334 "establishment or maintenance of polarity
of follicular epithelium" evidence=IMP] [GO:0045197 "establishment
or maintenance of epithelial cell apical/basal polarity"
evidence=NAS;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007391 "dorsal closure" evidence=IMP;TAS] [GO:0050803
"regulation of synapse structure and activity" evidence=IMP]
[GO:0007280 "pole cell migration" evidence=NAS] [GO:0008406 "gonad
development" evidence=NAS] [GO:0008105 "asymmetric protein
localization" evidence=IMP;TAS] [GO:0008285 "negative regulation of
cell proliferation" evidence=TAS] [GO:0051726 "regulation of cell
cycle" evidence=NAS] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=TAS] [GO:0016323 "basolateral plasma membrane"
evidence=IDA;TAS] [GO:0035088 "establishment or maintenance of
apical/basal cell polarity" evidence=IMP] [GO:0019991 "septate
junction assembly" evidence=IMP] [GO:0045186 "zonula adherens
assembly" evidence=IMP] [GO:0045571 "negative regulation of
imaginal disc growth" evidence=IMP] [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0007472 "wing disc morphogenesis"
evidence=IMP] [GO:0048749 "compound eye development" evidence=IMP]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045198 "establishment of epithelial cell
apical/basal polarity" evidence=IMP] [GO:0022402 "cell cycle
process" evidence=IMP] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0030100 "regulation of endocytosis" evidence=IMP]
[GO:0072002 "Malpighian tubule development" evidence=IMP]
[GO:0001737 "establishment of imaginal disc-derived wing hair
orientation" evidence=IMP] [GO:0042067 "establishment of ommatidial
planar polarity" evidence=IMP] [GO:0007464 "R3/R4 cell fate
commitment" evidence=IMP] [GO:0072089 "stem cell proliferation"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0045169 "fusome" evidence=IDA] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
EMBL:AE014297 GO:GO:0001708 GO:GO:0005576 GO:GO:0005918
GO:GO:0007391 GO:GO:0019991 GO:GO:0007464 eggNOG:COG4886
GO:GO:0048863 GO:GO:0005179 GO:GO:0031594 GO:GO:0050803
GO:GO:0016323 GO:GO:0000122 GO:GO:0051726 GO:GO:0030100
GO:GO:0005923 GO:GO:0007608 GO:GO:0000902 GO:GO:0042048
SUPFAM:SSF50156 GO:GO:0016328 InterPro:IPR025875 Pfam:PF12799
GO:GO:0050680 GO:GO:0007318 GO:GO:0060581 GO:GO:0016327
GO:GO:0045186 GO:GO:0045823 GO:GO:0045169 GO:GO:0042058
GO:GO:0001737 GO:GO:0045198 GO:GO:0072089 GO:GO:0016332
GO:GO:0022402 GO:GO:0008593 GO:GO:0030714 GO:GO:0016336
GO:GO:0046425 GO:GO:0045571 ChiTaRS:scrib
GeneTree:ENSGT00650000093182 EMBL:AF190774 EMBL:AJ252084
EMBL:AJ271647 EMBL:AY167903 EMBL:AY167904 EMBL:AY167905
EMBL:AY167906 EMBL:AY069661 EMBL:BT015240 EMBL:AY060469
RefSeq:NP_001014669.1 RefSeq:NP_001014670.2 RefSeq:NP_001036761.3
RefSeq:NP_001247318.1 RefSeq:NP_524754.2 RefSeq:NP_733154.1
RefSeq:NP_733155.2 RefSeq:NP_733156.1 ProteinModelPortal:Q7KRY7
SMR:Q7KRY7 MINT:MINT-1327318 STRING:Q7KRY7 PaxDb:Q7KRY7
PRIDE:Q7KRY7 EnsemblMetazoa:FBtr0308625 GeneID:44448
KEGG:dme:Dmel_CG43398 CTD:23513 FlyBase:FBgn0263289
InParanoid:Q7KRY7 KO:K16175 OrthoDB:EOG4K0P38 GenomeRNAi:44448
NextBio:837278 Bgee:Q7KRY7 GermOnline:CG5462 GO:GO:0072002
Uniprot:Q7KRY7
Length = 1851
Score = 239 (89.2 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 83/300 (27%), Positives = 136/300 (45%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L LFL+ N ++ L L +L+ L + N++ LP DIQ F L L + N I +
Sbjct: 39 LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L LQV + N I + F L NL + L + +T++ + LT+L L
Sbjct: 99 PDDIKHLQSLQVADFSSNPIPKLPSG-FSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL 157
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N L + L + I L +L+ +DL N+I + + + EL L HN++
Sbjct: 158 ELREN-LLKHLPETISQLTKLKRLDLGDNEIEDLPP------YLGYLPGLHELWLDHNQL 210
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ L L + L+ LD+S N+L + P++ GL SL LD++ NLL L + L
Sbjct: 211 QRLPPELGLLTKLTYLDVSENRLEEL-PNEISGLVSLTDLDLAQNLLEALPDGIAK-LSR 268
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYL 304
L L + N L RL+ + + L N + + + T+ ++ YL
Sbjct: 269 LTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYL 328
Score = 187 (70.9 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 71/298 (23%), Positives = 132/298 (44%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L ++ N + + + L LQ+ N + LPS L L N+ +T+L
Sbjct: 88 LDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPAD 147
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
LT+L+ + N + + + L L + L +N+I + L L L L+L
Sbjct: 148 FGSLTQLESLELRENLLKHLP-ETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLD 206
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
HNQL L ++ L +L +D+S N++ + N++ G+ ++ +L L N +E L
Sbjct: 207 HNQLQR-LPPELGLLTKLTYLDVSENRLEEL------PNEISGLVSLTDLDLAQNLLEAL 259
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKTFLPALE 246
+ + L+ L L N+L+ ++ D +G ++++ L ++ N L+ L S + L
Sbjct: 260 PDGIAKLSRLTILKLDQNRLQRLN--DTLGNCENMQELILTENFLSELP-ASIGQMTKLN 316
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYL 304
L V N+L L + L L N +K + +L T + ++ +YL
Sbjct: 317 NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYL 374
Score = 185 (70.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 62/216 (28%), Positives = 110/216 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L+ L+L++N+L+ L +LG L+KL L + +N+LE LP++I L L N +
Sbjct: 197 LPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL 256
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+L DG+ + L++L + +D N++ + D N N+ + L N ++ + +S+ +TK
Sbjct: 257 EALPDGIAK-LSRLTILKLDQNRLQRLN-DTLGNCENMQELILTENFLSELPASIGQMTK 314
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L + N L E+L +I L + L NK+ K ++ T + L +
Sbjct: 315 LNNLNVDRNAL-EYLPLEIGQCANLGVLSLRDNKLKKLPP------ELGNCTVLHVLDVS 367
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNK---LRTISPD 213
N++ L +L+ + L + LS N+ L T PD
Sbjct: 368 GNQLLYLPYSLVNLQ-LKAVWLSENQSQPLLTFQPD 402
Score = 178 (67.7 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 74/259 (28%), Positives = 119/259 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L LN+ L +L G+L++L+ L + +N L+ LP I ++L L +N I
Sbjct: 128 LKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L L L L +D NQ+ + E L L + + N++ + + +SGL L
Sbjct: 188 EDLPPYLGYLPGLHELWLDHNQLQRLP-PELGLLTKLTYLDVSENRLEELPNEISGLVSL 246
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L+ N L E L D I L RL + L N++ + N+ + N+ EL L
Sbjct: 247 TDLDLAQN-LLEALPDGIAKLSRLTILKLDQNRLQRL---NDTLGNCE---NMQELILTE 299
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL--EETSK 239
N + L ++ + L+ L++ N L + P + +L +L + N L L E +
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYL-PLEIGQCANLGVLSLRDNKLKKLPPELGNC 358
Query: 240 TFLPALEELFVSHNSLTRL 258
T L L+ VS N L L
Sbjct: 359 TVLHVLD---VSGNQLLYL 374
Score = 170 (64.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 61/228 (26%), Positives = 105/228 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L L +N ++ L LG L L L ++ NQL+ LP ++ L ++L L + NR+
Sbjct: 174 LTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRL 233
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + GL L ++ N + + D L L + L N++ +N +L +
Sbjct: 234 EELPNEISGLVSLTDLDLAQNLLEALP-DGIAKLSRLTILKLDQNRLQRLNDTLGNCENM 292
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L+ N L+E L I + +L +++ N + ++ N+ L L+
Sbjct: 293 QELILTENFLSE-LPASIGQMTKLNNLNVDRNALEYLPL------EIGQCANLGVLSLRD 345
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
N+++ L L L LD+S N+L + P + L LK + +S N
Sbjct: 346 NKLKKLPPELGNCTVLHVLDVSGNQLLYL-PYSLVNLQ-LKAVWLSEN 391
Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 46/154 (29%), Positives = 76/154 (49%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L N L++L + LS+L +L ++QN+L+ L + + L N
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
++ L + +TKL N+D N + + E NL +SL++N++ + L T
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPL-EIGQCANLGVLSLRDNKLKKLPPELGNCTV 360
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L L +S NQL +L + L+ L+ V LS N+
Sbjct: 361 LHVLDVSGNQLL-YLPYSLVNLQ-LKAVWLSENQ 392
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 232 (86.7 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 87/316 (27%), Positives = 149/316 (47%)
Query: 4 DLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRI 61
D L L+ NRL L+ G L L +LQ L + NQL L P L +L NR+
Sbjct: 61 DTELLDLSGNRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRL 120
Query: 62 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLT 119
+ G+ GLT L + ++ NQI + F L +L + + +N + + + +GL
Sbjct: 121 RIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLA 180
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
KL+ + L L+ + GL + L ++ + ++G+ + EL++
Sbjct: 181 KLSTITLERCNLST-----VPGLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEI 235
Query: 180 QH-NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
H +E LD G+L+G++ LS L ++ L ++ L L++LD+S N ++ +
Sbjct: 236 HHWPSLEALDPGSLVGLN-LSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPAR 294
Query: 238 SKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGL 296
+ L L+EL +S LT + FHGL D+A N ++ + + A + ++
Sbjct: 295 RLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLE-ETAFPSPDKLV-- 351
Query: 297 NSTLRIYLEGNPVLCD 312
TLR L GNP+ CD
Sbjct: 352 --TLR--LSGNPLTCD 363
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 71/279 (25%), Positives = 122/279 (43%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-G 66
L L + S S+ + + +L+ +P + L ++L L + NR+ L G
Sbjct: 21 LLLPGGSISSCPTVCDCTSQTRAVFCAHRRLDTIPGGLPLDTELLDL--SGNRLWGLQRG 78
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 125
+L L +LQ ++ +NQ++ + F L +L ++ LQ N++ + + SGLT L L
Sbjct: 79 MLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLD 138
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIE 185
L NQ+ FL L L+ +++ N + F G+ + + L+ +
Sbjct: 139 LRLNQIVLFLDGAFSELGSLQQLEVGDNHL-VF----VAPGAFAGLAKLSTITLERCNLS 193
Query: 186 NLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH-NLLTTLEETSKTFLP 243
+ G AL + L L L + + GL LK L+I H L L+ S L
Sbjct: 194 TVPGLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLN 253
Query: 244 ALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAI 281
L L ++ +L+ + + H L L DL+ N I AI
Sbjct: 254 -LSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAI 291
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 77/263 (29%), Positives = 114/263 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---- 55
GL L L L NRL+ + G L+ L LL + NQ+ L D FS+LGSL
Sbjct: 106 GLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQI-VLFLD-GAFSELGSLQQLEV 163
Query: 56 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-S 114
+N+ + G GL KL ++ ++ V L L ++ L+ I + + +
Sbjct: 164 GDNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGA 223
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L GL +L L + H E L D L L L+ + N + + + + I
Sbjct: 224 LRGLGQLKELEIHHWPSLEAL--DPGSLVGLNLSSLAITRCNLSSVPFQALHHLSFL-RI 280
Query: 175 FELKLQHNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
L L N I + L + L L LS L +I+ F GL + +LD++ N L T
Sbjct: 281 --LDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQT 338
Query: 234 LEETSKTFLPALEELFVSHNSLT 256
LEET+ L L +S N LT
Sbjct: 339 LEETAFPSPDKLVTLRLSGNPLT 361
>WB|WBGene00006593 [details] [associations]
symbol:tol-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007166 "cell
surface receptor signaling pathway" evidence=TAS] [GO:0009790
"embryo development" evidence=IMP] [GO:0006952 "defense response"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] [GO:0030424 "axon"
evidence=ND] [GO:0005057 "receptor signaling protein activity"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 GO:GO:0009792 GO:GO:0040007
GO:GO:0006952 GO:GO:0002119 GO:GO:0010171 GO:GO:0005622
GO:GO:0005623 GO:GO:0007166 GO:GO:0005057
GeneTree:ENSGT00700000104286 SUPFAM:SSF52200 HSSP:O60603
EMBL:FO080418 RefSeq:NP_001020983.1 ProteinModelPortal:Q9N5Z3
SMR:Q9N5Z3 DIP:DIP-24325N IntAct:Q9N5Z3 MINT:MINT-1108170
EnsemblMetazoa:C07F11.1 GeneID:171635 KEGG:cel:CELE_C07F11.1
UCSC:C07F11.1 CTD:171635 WormBase:C07F11.1 InParanoid:Q9N5Z3
OMA:NPYLVEI NextBio:872085 ArrayExpress:Q9N5Z3 Uniprot:Q9N5Z3
Length = 1221
Score = 236 (88.1 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 89/339 (26%), Positives = 165/339 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQ-LGSLYANNN 59
L L L ++ N +++ + + +L++L N+L++LP + +Q + + L+ +N
Sbjct: 281 LASLVALNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHN 340
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I L G +L T LQ ++ NQ+ + R + + ++ L NN + + SSLSG
Sbjct: 341 SIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSLSG 400
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L LSHN+LTE + I +++L+ VDLS+N+I K N+++ + +
Sbjct: 401 L-KLESLDLSHNKLTE-VPAAIGKVEQLKKVDLSHNRIAK--VYQYVLNKIK---QLHTV 453
Query: 178 KLQHNEIENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L +N+++++ + L LD+S+N++ + D F L+ + + N + +L+E
Sbjct: 454 DLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKIKSLDE 513
Query: 237 TSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGL 296
T L L VSHN + L + LP + A NN IN+ A L
Sbjct: 514 -GLTEASGLRRLDVSHNEILVLK--WSALPENLEILNADNN--DINLLTAASMSPSTANL 568
Query: 297 NSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGET 335
S + + G ++ D + +++++ NN G+T
Sbjct: 569 KS-VSLSNNGITIMNADQIPNSLESLDVSNNRLAKLGKT 606
Score = 227 (85.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 76/273 (27%), Positives = 132/273 (48%)
Query: 10 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL--DGL 67
L N LK + + L+ L L + +N++EA S + +L L A+ N++ SL + L
Sbjct: 266 LAGNALKRVPDAVAELASLVALNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWL 325
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYL 126
+ ++ +++ N I + N NL ++ L +NQ+ L +K+ L L
Sbjct: 326 QKCEKRIAHLHLEHNSIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPENSKIGNLRL 385
Query: 127 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIEN 186
S+N L + GLK L ++DLS+NK+ + GK V + ++ L HN I
Sbjct: 386 SNNSLELLEPSSLSGLK-LESLDLSHNKLTEVPAAI-GK-----VEQLKKVDLSHNRIAK 438
Query: 187 L-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPAL 245
+ L I L +DLS+N+L++I P F L LD+S+N ++ L + + P L
Sbjct: 439 VYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKDAFARCPKL 498
Query: 246 EELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
++ + N + LD+ L + D++HN I
Sbjct: 499 RKISMKMNKIKSLDEGLTEASGLRRLDVSHNEI 531
Score = 221 (82.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 81/319 (25%), Positives = 154/319 (48%)
Query: 3 TDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNR 60
T+L L L++N+L+ + L SK+ L + N LE L PS + +L SL ++N+
Sbjct: 354 TNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSLSGL-KLESLDLSHNK 412
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 119
+T + + + +L+ ++ N+I V + + L ++ L NNQ+ S+ + S +
Sbjct: 413 LTEVPAAIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSS 472
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
+L L +S+N+++ D +LR + + NKI +EG + G+ L +
Sbjct: 473 ELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKIKSL---DEGLTEASGLRR---LDV 526
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI-GLDSLKMLDISHNLLTTLEETS 238
HNEI L + + L L+ +N + ++ +LK + +S+N +T +
Sbjct: 527 SHNEILVLKWSALP-ENLEILNADNNDINLLTAASMSPSTANLKSVSLSNNGITIMNADQ 585
Query: 239 KTFLP-ALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQC-QIFGL 296
+P +LE L VS+N L +L K + K+ L N+K N+ + T+ ++
Sbjct: 586 ---IPNSLESLDVSNNRLAKLGKT----ALAAKSQLRRLNLKG-NLLTVVATESMKVVEA 637
Query: 297 NSTLRIYLEGNPVLCDDSM 315
L++ + NP++CD M
Sbjct: 638 VHPLKVEISENPLICDCQM 656
Score = 181 (68.8 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 75/276 (27%), Positives = 134/276 (48%)
Query: 10 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLDGLL 68
L+ NRL ++E L + ++ + + N + L D+ L + L L A NRI L L
Sbjct: 201 LSRNRLTNIEQFLRGIPAIRQISVAYNSIAEL--DLSLATPFLQQLDAEANRIVDLTSL- 257
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 128
G T + V N+ N + V D L +L ++++ N+I + NSS+ +L L S+
Sbjct: 258 PG-TVVHV-NLAGNALKRVP-DAVAELASLVALNVSRNEIEAGNSSVFSSPELEMLDASY 314
Query: 129 NQLTEFLLDDIRGL-KRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N+L ++ ++ KR+ + L +N I + G + TN+ L L N++
Sbjct: 315 NKLDSLPVEWLQKCEKRIAHLHLEHNSIEQL----TG-GVLANATNLQTLDLSSNQLRVF 369
Query: 188 -DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALE 246
D L + L LS+N L + P GL L+ LD+SHN LT + + L+
Sbjct: 370 RDEVLPENSKIGNLRLSNNSLELLEPSSLSGL-KLESLDLSHNKLTEVPAAIGK-VEQLK 427
Query: 247 ELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
++ +SHN + ++ + + + L DL++N +++I
Sbjct: 428 KVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSI 463
Score = 141 (54.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 67/288 (23%), Positives = 129/288 (44%)
Query: 22 LGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLDGLLRGLTKLQVFNMD 80
L +L LQ+L I N+L +L + +Q L + + NR+T+++ LRG+ ++ ++
Sbjct: 166 LCSLPHLQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTNIEQFLRGIPAIRQISVA 225
Query: 81 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 140
+N I + D L + + N+I + +SL G + ++ L+ N L + D +
Sbjct: 226 YNSIAEL--DLSLATPFLQQLDAEANRIVDL-TSLPGT--VVHVNLAGNALKR-VPDAVA 279
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGI--HGLS 198
L L +++S N+I G + V + L +N++++L + ++
Sbjct: 280 ELASLVALNVSRNEIEA------GNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIA 333
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
L L HN + ++ +L+ LD+S N L + + L +S+NSL L
Sbjct: 334 HLHLEHNSIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELL 393
Query: 259 D-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGL--NSTLRIY 303
+ GL L DL+HN + + + Q + L N ++Y
Sbjct: 394 EPSSLSGLK-LESLDLSHNKLTEVPAAIGKVEQLKKVDLSHNRIAKVY 440
Score = 135 (52.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 51/203 (25%), Positives = 91/203 (44%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 137
N I D+ N+ +L IS NN ++ LT L +L + + T F +
Sbjct: 54 NTTITPIASSNYDQVANIRSL-FISCDNNNFQFPDAYFKSLTALHHLRIVGCETTHFSVK 112
Query: 138 DIRGLKRLRTVDLSYNKINKFGTRNEGKNQV-QGVTNIFELKLQHNE-IENLDGALMGIH 195
L LR ++L ++I+ T E V + + + L + IE L +
Sbjct: 113 LFEDLAALRRLEL--DQISTASTSFEMTEDVLMPLARLEKFSLTRSRNIELPQRLLCSLP 170
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
L L++S N+L ++ ++ L ++D+S N LT +E+ + +PA+ ++ V++NS+
Sbjct: 171 HLQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTNIEQFLRG-IPAIRQISVAYNSI 229
Query: 256 TRLDKDFHGLPVLCKADLAHNNI 278
LD P L + D N I
Sbjct: 230 AELDLSL-ATPFLQQLDAEANRI 251
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 48/193 (24%), Positives = 90/193 (46%)
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 126
LL L LQV N+ N++ +RR+E L + L N++T++ L G+ + + +
Sbjct: 165 LLCSLPHLQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTNIEQFLRGIPAIRQISV 224
Query: 127 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIEN 186
++N + E LD L+ +D N+I + G + + L N ++
Sbjct: 225 AYNSIAE--LDLSLATPFLQQLDAEANRIVDL-------TSLPGT--VVHVNLAGNALKR 273
Query: 187 LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE-ETSKTFLPAL 245
+ A+ + L L++S N++ + F + L+MLD S+N L +L E + +
Sbjct: 274 VPDAVAELASLVALNVSRNEIEAGNSSVFSSPE-LEMLDASYNKLDSLPVEWLQKCEKRI 332
Query: 246 EELFVSHNSLTRL 258
L + HNS+ +L
Sbjct: 333 AHLHLEHNSIEQL 345
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 234 (87.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 74/236 (31%), Positives = 114/236 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L+ L L L+NN++KSL GQ L L+ L + N L P I+ L L ++N
Sbjct: 135 LSSLVVLHLHNNKIKSL-GQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSN 193
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
I+ + DG G L+ ++ N ++ V F NL +L S+ ++ + +L+G
Sbjct: 194 SISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPNLTGT 253
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L L+ +++ + + K LRT+DLSYN I + N G + E+
Sbjct: 254 VHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPSFN-------GCYALEEIS 306
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
LQ N+I + +G G+ L LDLS N + I F L S+ LDIS N LT+
Sbjct: 307 LQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTS 362
Score = 220 (82.5 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 80/282 (28%), Positives = 137/282 (48%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L L L N L + + L L +L++L ++ NQL+ +PS+ I+ S L SL + N IT
Sbjct: 18 LEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 77
Query: 63 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
S+ + GLT+L+ +D N +T V NL L +++L N+I+S+ + + + L+
Sbjct: 78 SVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSS 137
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L+L +N++ GL L T+DL+YN + +F ++ + ++ EL
Sbjct: 138 LVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEF------PQAIKALPSLKELLFH 191
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI-SHNLLTTLEETS 238
N I + DGA G L + L N L + F L L L I +++ +
Sbjct: 192 SNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPNLT 251
Query: 239 KTFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIK 279
T LE L ++ ++ + + +L DL++NNIK
Sbjct: 252 GTV--HLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIK 291
Score = 200 (75.5 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 63/227 (27%), Positives = 110/227 (48%)
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
N IT L + + L+ + N ++ + L L ++LQNNQ+ ++ S ++
Sbjct: 2 NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIR 61
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL+ L L L N +T D GL +LR + L N + + + + + +
Sbjct: 62 GLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQ-----PLSNLPTLQA 116
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I ++ D A + L L L +NK++++ F GLD+L+ LD+++N L
Sbjct: 117 LTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFP 176
Query: 236 ETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAI 281
+ K LP+L+EL NS++ + D F G P+L L N + +
Sbjct: 177 QAIKA-LPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFV 222
Score = 182 (69.1 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 80/289 (27%), Positives = 132/289 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL +L L L NN+LK++ + + LS LQ L ++ N + ++P D + +QL L+ ++
Sbjct: 38 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDD 97
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LS 116
N +T + L L LQ + N+I+ + F NL +L + L NN+I S+
Sbjct: 98 NSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFD 157
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L++N L EF I+ L L+ + N I+ N + ++++
Sbjct: 158 GLDNLETLDLNYNNLGEFP-QAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYD 216
Query: 177 LKLQ---HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L ++ NL D + I G S + N T+ + + L K+ IS NL
Sbjct: 217 NPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPNLTGTVHLES-LTLTGTKISSISSNLC- 274
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+E L L +S+N++ L F+G L + L N I I
Sbjct: 275 --QEQKM-----LRTLDLSYNNIKDLPS-FNGCYALEEISLQRNQIHQI 315
Score = 177 (67.4 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 75/288 (26%), Positives = 133/288 (46%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN- 58
GL+ L L L+ N + S+ E L++L+ L ++ N L +P +Q S L +L A
Sbjct: 62 GLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVP--VQPLSNLPTLQALTL 119
Query: 59 --NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N+I+S+ D L+ L V ++ N+I + + F L NL+++ L N + ++
Sbjct: 120 ALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAI 179
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L L L N ++ G LRT+ L N ++ F G + ++++
Sbjct: 180 KALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS-F----VGNSAFHNLSDLH 234
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L ++ + L G L L L+ K+ +IS + L+ LD+S+N + L
Sbjct: 235 SLVIRGASMVQRFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLP 294
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
+ + ALEE+ + N + ++ + F GL L DL+ N I I+
Sbjct: 295 SFNGCY--ALEEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIH 340
Score = 155 (59.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 62/231 (26%), Positives = 111/231 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
GL +L L LN N L + L L+ L+ N + +P L +++ +N
Sbjct: 158 GLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDN 217
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMNSSL 115
++ + + L+ L ++ +MV+R F NL +L+S++L +I+S++S+L
Sbjct: 218 PLSFVGNSAFHNLSDLH--SLVIRGASMVQR--FPNLTGTVHLESLTLTGTKISSISSNL 273
Query: 116 SGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
K L L LS+N + + L G L + L N+I++ EG QG+T++
Sbjct: 274 CQEQKMLRTLDLSYNNIKD--LPSFNGCYALEEISLQRNQIHQI---KEGT--FQGLTSL 326
Query: 175 FELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
L L N I + D A + ++ LD+S N+L + + GL+ LK++
Sbjct: 327 RILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTSFPTEGLNGLNQLKLV 377
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIE-QNQLEALPSDIQLFSQLGSLYANNNRIT 62
L + L +N L + LS L LVI + ++ P+ + L SL +I+
Sbjct: 209 LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPN-LTGTVHLESLTLTGTKIS 267
Query: 63 SLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK 120
S+ L + L+ ++ +N I + F + L+ ISLQ NQI + + GLT
Sbjct: 268 SISSNLCQEQKMLRTLDLSYNNIKDL--PSFNGCYALEEISLQRNQIHQIKEGTFQGLTS 325
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQGVTNIFELK 178
L L LS N + E L + +D+S+N++ F T G NQ++ V N F+LK
Sbjct: 326 LRILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTSFPTEGLNGLNQLKLVGN-FKLK 383
>WB|WBGene00002282 [details] [associations]
symbol:let-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0002064
"epithelial cell development" evidence=IMP] [GO:0035150 "regulation
of tube size" evidence=IMP] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0045177 GO:GO:0040011
GO:GO:0040018 GO:GO:0002064 GeneTree:ENSGT00700000104286
GO:GO:0035150 EMBL:Z79598 EMBL:JQ292907 RefSeq:NP_510425.2
ProteinModelPortal:Q93373 SMR:Q93373 STRING:Q93373
EnsemblMetazoa:C44H4.2 GeneID:181554 KEGG:cel:CELE_C44H4.2
CTD:181554 WormBase:C44H4.2 HOGENOM:HOG000018354 OMA:PLVCTEN
Uniprot:Q93373
Length = 773
Score = 233 (87.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 83/323 (25%), Positives = 156/323 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEAL-PSDIQ-LFSQLGSLYA 56
GL +L L L+NN + ++ Q L+KL + + N++ ++ S Q + + + ++
Sbjct: 132 GLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINL 191
Query: 57 NNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SS 114
+N +T++ +RGL +LQ ++ N+I + F NL L+ ++L NQI +N +
Sbjct: 192 GHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQA 251
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
+ L YLYLS N++T+ + ++L +DL+ N+I N + G+ +
Sbjct: 252 FLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPA-----NSLSGLKQL 306
Query: 175 FELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
+L L HN+I N+ + L LS N+L+T++ GL +L+ + N + T+
Sbjct: 307 RQLYLAHNKISNISSNAFTNSSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTI 366
Query: 235 EETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
+ +L L ++ N LT + F L DL+ N + KT
Sbjct: 367 NRNAFYDAASLVMLDLAKNQLTEIAPTTFLAQLNLLLVDLSENKLP--------KTPYSA 418
Query: 294 FGLNSTL-RIYLEGNPVLCDDSM 315
F NS + + L+ NP++C +++
Sbjct: 419 F--NSRVGTVLLKENPLVCTENL 439
Score = 201 (75.8 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 66/236 (27%), Positives = 117/236 (49%)
Query: 51 LGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDE-FQNLHNLDSISLQNNQI 108
L + N+N I + L GL L ++ N I ++ E F NL+ L I+L +N+I
Sbjct: 112 LEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKI 171
Query: 109 TSMNSSLSGLTK--LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKN 166
S+++S K + + L HN +T IRGLK+L+++ L N+I + N N
Sbjct: 172 FSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNF-LN 230
Query: 167 QVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLD 225
V N+ L L N+I L+ A + + L L LS NK+ ++ F + L+MLD
Sbjct: 231 LP--VLNL--LNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLD 286
Query: 226 ISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+++N + + S + L L +L+++HN ++ + + + L+ N +K +
Sbjct: 287 LTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAFTNSSIVVLVLSSNELKTL 342
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 52/181 (28%), Positives = 86/181 (47%)
Query: 107 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGK 165
QI N + GL + L ++ +L E + GL +R +DLS NKI K G
Sbjct: 52 QIIRTNQAQVGL--IQSLTMNQAELVELPPNFFSGLF-IRRLDLSQNKIKKIDDAAFAGI 108
Query: 166 NQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDD-FIGLDSLKM 223
N V + E+ L HN IE + A L G+ L RLDLS+N + I + F L+ L
Sbjct: 109 NPV-----LEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYD 163
Query: 224 LDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
+++ N + ++ T + +++ + + HN++T + GL L L N I+ +
Sbjct: 164 INLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQL 223
Query: 282 N 282
+
Sbjct: 224 D 224
>UNIPROTKB|F1N365 [details] [associations]
symbol:FLII "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 EMBL:DAAA02048990 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 OMA:MEEWNED IPI:IPI00692791
Ensembl:ENSBTAT00000021517 Uniprot:F1N365
Length = 1268
Score = 235 (87.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 86/283 (30%), Positives = 136/283 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+T L WL LN L L +L +L KL+ L + N L L ++ L ++ A N +
Sbjct: 32 MTSLRWLKLNRTGLCYLPEELASLQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSL 91
Query: 62 TSL---DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+ D + + L L V ++ +NQ+T R E +N N+ ++L +N I S+ N
Sbjct: 92 KNSGVPDDIFK-LDDLSVLDLSYNQLTECPR-ELENAKNMLVLNLSHNSIDSIPNQLFIN 149
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
LT L YL LS N+L E L +R L L+T+ L+ N + R Q+ +T + L
Sbjct: 150 LTDLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLR-----QLPALTALQTL 203
Query: 178 KLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L++ + NL +L G+ L+ +DLS N L + P+ L L+ L++S N + L
Sbjct: 204 HLRNTQRTQSNLPTSLEGLSHLADVDLSCNDLTRV-PECLYALPGLRRLNLSSNQIAELS 262
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
++ LE L +S N LT L L L + L N +
Sbjct: 263 LCIDQWVH-LETLNLSRNQLTSLPSAICKLTKLKRLYLNSNQL 304
Score = 233 (87.1 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 75/269 (27%), Positives = 132/269 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--ALPSDIQLFSQLGSLYANNN 59
L L L +++N L +L G+L +L L+ +V N L+ +P DI L L + N
Sbjct: 55 LQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYN 114
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++T L + V N+ N I + F NL +L + L N++ S+ + L
Sbjct: 115 QLTECPRELENAKNMLVLNLSHNSIDSIPNQLFINLTDLLYLDLSENRLESLPPQMRRLV 174
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ N L L + L L+T+ L N T++ ++G++++ ++ L
Sbjct: 175 HLQTLVLNGNPLLHAQLRQLPALTALQTLHLR----NTQRTQSNLPTSLEGLSHLADVDL 230
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISP--DDFIGLDSLKMLDISHNLLTTLEET 237
N++ + L + GL RL+LS N++ +S D ++ L++L ++S N LT+L +
Sbjct: 231 SCNDLTRVPECLYALPGLRRLNLSSNQIAELSLCIDQWVHLETL---NLSRNQLTSLP-S 286
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLP 266
+ L L+ L+++ N L DF GLP
Sbjct: 287 AICKLTKLKRLYLNSNQL-----DFDGLP 310
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 63/246 (25%), Positives = 115/246 (46%)
Query: 42 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
P +++ + L L N + L L L KL+ ++ N +T + E +L +L +I
Sbjct: 26 PENVKAMTSLRWLKLNRTGLCYLPEELASLQKLEHLSVSHNNLTTLH-GELSSLPSLRAI 84
Query: 102 SLQNNQI--TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ N + + + + L L+ L LS+NQLTE ++ K + ++LS+N I+
Sbjct: 85 VARANSLKNSGVPDDIFKLDDLSVLDLSYNQLTE-CPRELENAKNMLVLNLSHNSIDSI- 142
Query: 160 TRNEGKNQVQ-GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
NQ+ +T++ L L N +E+L + + L L L+ N L L
Sbjct: 143 -----PNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAL 197
Query: 219 DSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+L+ L + + T TS L L ++ +S N LTR+ + + LP L + +L+ N
Sbjct: 198 TALQTLHLRNTQRTQSNLPTSLEGLSHLADVDLSCNDLTRVPECLYALPGLRRLNLSSNQ 257
Query: 278 IKAINI 283
I +++
Sbjct: 258 IAELSL 263
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 75/315 (23%), Positives = 131/315 (41%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L L + N LK+ + + L L +L + NQL P +++ + L ++N
Sbjct: 78 LPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYNQLTECPRELENAKNMLVLNLSHN 137
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I S+ L LT L ++ N++ + + + L +L ++ L N + L
Sbjct: 138 SIDSIPNQLFINLTDLLYLDLSENRLESLP-PQMRRLVHLQTLVLNGNPLLHAQLRQLPA 196
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
LT L L+L + Q T+ L + GL L VDLS N + + + + +
Sbjct: 197 LTALQTLHLRNTQRTQSNLPTSLEGLSHLADVDLSCNDLTRV------PECLYALPGLRR 250
Query: 177 LKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I L + +H L L+LS N+L ++ P L LK L ++ N L
Sbjct: 251 LNLSSNQIAELSLCIDQWVH-LETLNLSRNQLTSL-PSAICKLTKLKRLYLNSNQLDFDG 308
Query: 236 ETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
S L +LEE ++N L + + L K L N + + + T+ ++
Sbjct: 309 LPSGIGKLSSLEEFMAANNKLELIPESLCRCTKLRKLVLNKNRLVTLPEAIHFLTEIEVL 368
Query: 295 GLNSTLRIYLEGNPV 309
+ + + PV
Sbjct: 369 DVRENPSLVMPPKPV 383
Score = 121 (47.7 bits), Expect = 0.00075, P = 0.00075
Identities = 35/109 (32%), Positives = 58/109 (53%)
Query: 2 LTDLNWLFLNNNRLK--SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
LT L L+LN+N+L L +G LS L+ + N+LE +P + ++L L N N
Sbjct: 291 LTKLKRLYLNSNQLDFDGLPSGIGKLSSLEEFMAANNKLELIPESLCRCTKLRKLVLNKN 350
Query: 60 RITSLDGLLRGLTKLQVFNMDFN-QITMVRR--DEFQNLHNLDSISLQN 105
R+ +L + LT+++V ++ N + M + D +N+D SLQN
Sbjct: 351 RLVTLPEAIHFLTEIEVLDVRENPSLVMPPKPVDRAAEWYNID-FSLQN 398
>FB|FBgn0028487 [details] [associations]
symbol:f-cup "flyers-cup" species:7227 "Drosophila
melanogaster" [GO:0007265 "Ras protein signal transduction"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014297 InterPro:IPR025875 Pfam:PF12799 HSSP:P07359
GeneTree:ENSGT00700000104287 UniGene:Dm.7643 GeneID:41677
KEGG:dme:Dmel_CG9611 CTD:41677 FlyBase:FBgn0028487 GenomeRNAi:41677
NextBio:825009 RefSeq:NP_731852.2 ProteinModelPortal:Q9V3X1
SMR:Q9V3X1 EnsemblMetazoa:FBtr0082846 UCSC:CG9611-RA
InParanoid:Q9V3X1 OMA:HERSTHE PhylomeDB:Q9V3X1 ArrayExpress:Q9V3X1
Bgee:Q9V3X1 Uniprot:Q9V3X1
Length = 693
Score = 231 (86.4 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 75/277 (27%), Positives = 131/277 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
LN L L++N L + ++ L L +L + N L LP +I +L L ++N+++ L
Sbjct: 158 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 217
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
+ L +L+ N+ +N+ + D +LH L+ + +N I S+ + L +L L
Sbjct: 218 PRAMYSLPELRHLNISYNEFVELNPD-ISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTAL 276
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L +N + E L D+ ++ L+ +DL +N + E ++ + ++ LQHN+I
Sbjct: 277 LLPYNHIKE-LPPDLVNMRSLQKIDLMHNDLTSLP---EDMGLLRKLDCLY---LQHNDI 329
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
L G L+ L S+N ++ I L LK+LD+ N +T L + L
Sbjct: 330 LELP-EFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPD-ELCLLRN 387
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L L VS+N+++ L L L + N IK I
Sbjct: 388 LNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 424
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 68/282 (24%), Positives = 129/282 (45%)
Query: 28 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 87
L L + N L + I+ L L ++N + L + L KL N+ N+++ +
Sbjct: 158 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 217
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
R + +L L +++ N+ +N +S L L +L HN + + L I L RL
Sbjct: 218 PRAMY-SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNI-QSLPGGIGFLVRLTA 275
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+ L YN I + + + ++ ++ L HN++ +L + + L L L HN +
Sbjct: 276 LLLPYNHIKELPP------DLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDI 329
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPV 267
+ P+ F G ++L L S+N + + + + LP L+ L + N +T L + L
Sbjct: 330 LEL-PE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRN 387
Query: 268 LCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV 309
L + D+++N I + + L+ L + + +EGNP+
Sbjct: 388 LNRLDVSNNTISVLPVTLS--------SLAHLISLQVEGNPI 421
Score = 176 (67.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 66/255 (25%), Positives = 124/255 (48%)
Query: 46 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN--QITMVRRDEFQNLHNLDSISL 103
+L + G+L +N + + L + + + N Q+T+ D + N L+++ L
Sbjct: 104 KLARKSGTLNLSNKALARVPKRLYDINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLDL 163
Query: 104 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR-- 161
+N +T ++ + L L L L N L E L +I L++L +++S+NK+++
Sbjct: 164 SSNTLTHISPKIENLQSLTVLTLHDNALVE-LPPEIGKLEKLVRLNVSHNKLSQLPRAMY 222
Query: 162 --------NEGKNQ-VQGVTNIFELKLQ------HNEIENLDGALMGIHGLSRLDLSHNK 206
N N+ V+ +I +L + HN I++L G + + L+ L L +N
Sbjct: 223 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 282
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLP 266
++ + PD + + SL+ +D+ HN LT+L E L L+ L++ HN + L +F G
Sbjct: 283 IKELPPD-LVNMRSLQKIDLMHNDLTSLPE-DMGLLRKLDCLYLQHNDILELP-EFEGNE 339
Query: 267 VLCKADLAHNNIKAI 281
L + ++N IK I
Sbjct: 340 ALNELHASNNFIKII 354
Score = 173 (66.0 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 71/261 (27%), Positives = 117/261 (44%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L L++N L L ++G L KL L + N+L LP + +L L + N
Sbjct: 178 LQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMYSLPELRHLNISYNEF 237
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L+ + L L+ + N I + L L ++ L N I + L + L
Sbjct: 238 VELNPDISDLHMLEFLDGGHNNIQSLPGG-IGFLVRLTALLLPYNHIKELPPDLVNMRSL 296
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+ L HN LT L +D+ L++L + L +N I + + +G + EL +
Sbjct: 297 QKIDLMHNDLTS-LPEDMGLLRKLDCLYLQHNDILELP-------EFEGNEALNELHASN 348
Query: 182 NEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I+ + A+ + L LDL NK+ + PD+ L +L LD+S+N ++ L T +
Sbjct: 349 NFIKIIPKAMCSNLPHLKILDLRDNKITEL-PDELCLLRNLNRLDVSNNTISVLPVTLSS 407
Query: 241 FLPALEELFVSHNSLTRLDKD 261
L L L V N + + +D
Sbjct: 408 -LAHLISLQVEGNPIKTIRRD 427
Score = 136 (52.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 70/292 (23%), Positives = 125/292 (42%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
LN L +NN +K + + L L++L + N++ LP ++ L L L +NN I+
Sbjct: 341 LNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISV 400
Query: 64 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 123
L L L L ++ N I +RRD Q +L + + G+ +
Sbjct: 401 LPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDAST 460
Query: 124 LY-LSHNQLTEFLLDD--IRG----LKRLR-TVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+S +L +DD I G +LR T L+ N + + + + Q+ +
Sbjct: 461 SAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLAVN-LEELTSVPDQVFQIARDEGVH 519
Query: 176 ELKLQHNEIENLDGALMGIHGL-SRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
+ N++ L L + L + L LS+N + + P + L++S+NLL L
Sbjct: 520 VVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYV-PQFISQFTRISFLNLSNNLLNDL 578
Query: 235 EETSKTFLPALEELFVSHNSLTRLDK---DFHGLPVLCKADLAHNNIKAINI 283
T L L EL +++N + + GL +L ++ N+IK +N+
Sbjct: 579 P-TEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASE---NHIKMLNV 626
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L+NN + + + +++ L + N L LP++ + + L L NNR +
Sbjct: 545 LVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNC 604
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
+ L L++ N I M+ QN+ L ++ L+NN I ++ L LT + +L L
Sbjct: 605 VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELV 664
Query: 128 HN 129
N
Sbjct: 665 GN 666
>UNIPROTKB|J3QLG3 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR003591 SMART:SM00369
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 CTD:2314 EMBL:AC127537
RefSeq:NP_001243193.1 UniGene:Hs.513984 GeneID:2314 KEGG:hsa:2314
HGNC:HGNC:3750 ChiTaRS:FLII ProteinModelPortal:J3QLG3
Ensembl:ENST00000579294 Uniprot:J3QLG3
Length = 1258
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 87/283 (30%), Positives = 135/283 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+T L WL LN L L +L L KL+ L + N L L ++ L ++ A N +
Sbjct: 21 MTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSL 80
Query: 62 TSL---DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+ D + + L L V ++ NQ+T R E +N N+ ++L +N I ++ N
Sbjct: 81 KNSGVPDDIFK-LDDLSVLDLSHNQLTECPR-ELENAKNMLVLNLSHNSIDTIPNQLFIN 138
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
LT L YL LS N+L E L +R L L+T+ L+ N + R Q+ +T + L
Sbjct: 139 LTDLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLR-----QLPAMTALQTL 192
Query: 178 KLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L+ + NL +L G+ L+ +DLS N L + P+ L SL+ L++S N +T L
Sbjct: 193 HLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV-PECLYTLPSLRRLNLSSNQITELS 251
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
++ +E L +S N LT L L L K L N +
Sbjct: 252 LCIDQWVH-VETLNLSRNQLTSLPSAICKLSKLKKLYLNSNKL 293
Score = 226 (84.6 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 72/269 (26%), Positives = 133/269 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--ALPSDIQLFSQLGSLYANNN 59
L L L +++N L +L G+L +L L+ +V N L+ +P DI L L ++N
Sbjct: 44 LQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHN 103
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++T L + V N+ N I + F NL +L + L N++ S+ + L
Sbjct: 104 QLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLESLPPQMRRLV 163
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ N L L + + L+T+ L + T++ ++G++N+ ++ L
Sbjct: 164 HLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQ----RTQSNLPTSLEGLSNLADVDL 219
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISP--DDFIGLDSLKMLDISHNLLTTLEET 237
N++ + L + L RL+LS N++ +S D ++ +++L ++S N LT+L +
Sbjct: 220 SCNDLTRVPECLYTLPSLRRLNLSSNQITELSLCIDQWVHVETL---NLSRNQLTSLP-S 275
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLP 266
+ L L++L+++ N L DF GLP
Sbjct: 276 AICKLSKLKKLYLNSNKL-----DFDGLP 299
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 63/246 (25%), Positives = 114/246 (46%)
Query: 42 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
P +++ + L L N + L L L KL+ ++ N +T + E +L +L +I
Sbjct: 15 PENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAI 73
Query: 102 SLQNNQI--TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ N + + + + L L+ L LSHNQLTE ++ K + ++LS+N I+
Sbjct: 74 VARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTE-CPRELENAKNMLVLNLSHNSIDTI- 131
Query: 160 TRNEGKNQVQ-GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
NQ+ +T++ L L N +E+L + + L L L+ N L +
Sbjct: 132 -----PNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAM 186
Query: 219 DSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+L+ L + T TS L L ++ +S N LTR+ + + LP L + +L+ N
Sbjct: 187 TALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPSLRRLNLSSNQ 246
Query: 278 IKAINI 283
I +++
Sbjct: 247 ITELSL 252
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 72/314 (22%), Positives = 132/314 (42%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L L + N LK+ + + L L +L + NQL P +++ + L ++N
Sbjct: 67 LPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTECPRELENAKNMLVLNLSHN 126
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I ++ L LT L ++ N++ + + + L +L ++ L N + L
Sbjct: 127 SIDTIPNQLFINLTDLLYLDLSENRLESLP-PQMRRLVHLQTLVLNGNPLLHAQLRQLPA 185
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+T L L+L Q T+ L + GL L VDLS N + + + + ++
Sbjct: 186 MTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV------PECLYTLPSLRR 239
Query: 177 LKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I L + +H + L+LS N+L ++ P L LK L ++ N L
Sbjct: 240 LNLSSNQITELSLCIDQWVH-VETLNLSRNQLTSL-PSAICKLSKLKKLYLNSNKLDFDG 297
Query: 236 ETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
S L LEE ++N+L + + P L K L N++ + + T+ ++
Sbjct: 298 LPSGIGKLTNLEEFMAANNNLELVPESLCRCPKLRKLVLNKNHLVTLPEAIHFLTEIEVL 357
Query: 295 GLNSTLRIYLEGNP 308
+ + + P
Sbjct: 358 DVRENPNLVMPPKP 371
>ZFIN|ZDB-GENE-071212-3 [details] [associations]
symbol:flii "flightless I homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0045214 "sarcomere organization" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 ZFIN:ZDB-GENE-071212-3
InterPro:IPR003591 SMART:SM00369 GO:GO:0045214 InterPro:IPR007123
PANTHER:PTHR11977 Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 EMBL:BX649547 IPI:IPI00488133
Ensembl:ENSDART00000083263 Uniprot:E7F493
Length = 1260
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 75/269 (27%), Positives = 134/269 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--ALPSDIQLFSQLGSLYANNN 59
L L L +++N L +L G+L +L L+ +V N L+ +P DI L L ++N
Sbjct: 55 LQKLEHLSVSHNSLTTLHGELSSLPNLRAVVARANNLKNSGVPDDIFQLDDLSVLDLSHN 114
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++T + L + V N+ N I + F NL +L + L +N + S+ + L
Sbjct: 115 QLTEIPRDLENSRNMLVLNLSHNSIDNIPNQLFINLTDLLYLDLSDNNLDSLPPQMRRLV 174
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L++N L L + + L+T+ L N T+N ++G++N+ ++ L
Sbjct: 175 HLQTLILNNNPLMHAQLRQLPVMVSLQTLHLR----NTQRTQNNMPTSLEGLSNLTDVDL 230
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISP--DDFIGLDSLKMLDISHNLLTTLEET 237
N++ + L + L RL+LS N++ +S D + L++L ++S N LT+L +
Sbjct: 231 SCNDLTRVPECLYSLVNLKRLNLSSNQISELSLCIDQWTKLETL---NLSRNQLTSLP-S 286
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLP 266
+ L L++L+V+ N + DF GLP
Sbjct: 287 AICKLSKLKKLYVNSNKI-----DFDGLP 310
Score = 212 (79.7 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 73/231 (31%), Positives = 119/231 (51%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNR 60
LTDL +L L++N L SL Q+ L LQ L++ N L A + + L +L+ N +
Sbjct: 150 LTDLLYLDLSDNNLDSLPPQMRRLVHLQTLILNNNPLMHAQLRQLPVMVSLQTLHLRNTQ 209
Query: 61 IT--SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
T ++ L GL+ L ++ N +T V + +L NL ++L +NQI+ ++ +
Sbjct: 210 RTQNNMPTSLEGLSNLTDVDLSCNDLTRVPECLY-SLVNLKRLNLSSNQISELSLCIDQW 268
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
TKL L LS NQLT L I L +L+ + ++ NKI+ F G V ++N+ E
Sbjct: 269 TKLETLNLSRNQLTS-LPSAICKLSKLKKLYVNSNKID-FDGLPSG---VGKLSNLVEFM 323
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
+N +E + L L +L L+ N+L T+ P+ L L++LD+ N
Sbjct: 324 AANNNLELVPEGLCRCGKLKKLVLNKNRLVTL-PEAIHFLTELEVLDVREN 373
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 64/260 (24%), Positives = 121/260 (46%)
Query: 42 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
P ++ + L L N + L L L KL+ ++ N +T + E +L NL ++
Sbjct: 26 PEHVKSMTSLRWLKLNRTGLCYLPEELASLQKLEHLSVSHNSLTTLH-GELSSLPNLRAV 84
Query: 102 SLQNNQI--TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ N + + + + L L+ L LSHNQLTE + D+ + + ++LS+N I+
Sbjct: 85 VARANNLKNSGVPDDIFQLDDLSVLDLSHNQLTE-IPRDLENSRNMLVLNLSHNSIDNI- 142
Query: 160 TRNEGKNQVQ-GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
NQ+ +T++ L L N +++L + + L L L++N L +
Sbjct: 143 -----PNQLFINLTDLLYLDLSDNNLDSLPPQMRRLVHLQTLILNNNPLMHAQLRQLPVM 197
Query: 219 DSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
SL+ L + + T TS L L ++ +S N LTR+ + + L L + +L+ N
Sbjct: 198 VSLQTLHLRNTQRTQNNMPTSLEGLSNLTDVDLSCNDLTRVPECLYSLVNLKRLNLSSNQ 257
Query: 278 IKAINIQLALKTQCQIFGLN 297
I +++ + T+ + L+
Sbjct: 258 ISELSLCIDQWTKLETLNLS 277
Score = 158 (60.7 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 75/319 (23%), Positives = 140/319 (43%)
Query: 24 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 83
+++ L+ L + + L LP ++ +L L ++N +T+L G L L L+ N
Sbjct: 31 SMTSLRWLKLNRTGLCYLPEELASLQKLEHLSVSHNSLTTLHGELSSLPNLRAVVARANN 90
Query: 84 I--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 141
+ + V D FQ L +L + L +NQ+T + L + L LSHN +
Sbjct: 91 LKNSGVPDDIFQ-LDDLSVLDLSHNQLTEIPRDLENSRNMLVLNLSHNSIDNIPNQLFIN 149
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG--ALMGIHGLSR 199
L L +DLS N ++ + +Q + + L H ++ L +L +H L
Sbjct: 150 LTDLLYLDLSDNNLDSLPPQMRRLVHLQTLI-LNNNPLMHAQLRQLPVMVSLQTLH-LRN 207
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
+ N + P GL +L +D+S N LT + E + L L+ L +S N ++ L
Sbjct: 208 TQRTQNNM----PTSLEGLSNLTDVDLSCNDLTRVPECLYS-LVNLKRLNLSSNQISELS 262
Query: 260 KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVI 319
L +L+ N + ++ + ++ + +NS +I +G P + ++
Sbjct: 263 LCIDQWTKLETLNLSRNQLTSLPSAICKLSKLKKLYVNSN-KIDFDGLPSGVG-KLSNLV 320
Query: 320 DAMETINNNTKIHGETICQ 338
+ M NNN ++ E +C+
Sbjct: 321 EFMAA-NNNLELVPEGLCR 338
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 55/193 (28%), Positives = 82/193 (42%)
Query: 145 LRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSH 204
+R VDLS N K G E V+ +T++ LKL + L L + L L +SH
Sbjct: 10 IRGVDLSGNDF-KGGNFPE---HVKSMTSLRWLKLNRTGLCYLPEELASLQKLEHLSVSH 65
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF-LPALEELFVSHNSLTRLDKDFH 263
N L T+ + L +L+ + N L F L L L +SHN LT + +D
Sbjct: 66 NSLTTLH-GELSSLPNLRAVVARANNLKNSGVPDDIFQLDDLSVLDLSHNQLTEIPRDLE 124
Query: 264 GLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV-LCDDSMRAVIDAM 322
+ +L+HN+I I QL + L L + L N + MR ++
Sbjct: 125 NSRNMLVLNLSHNSIDNIPNQLFIN-------LTDLLYLDLSDNNLDSLPPQMRRLVHLQ 177
Query: 323 ETI-NNNTKIHGE 334
I NNN +H +
Sbjct: 178 TLILNNNPLMHAQ 190
>UNIPROTKB|Q13045 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006936 "muscle
contraction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0003779 GO:GO:0006355
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0006351
GO:GO:0005925 GO:GO:0006936 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000016110
OMA:MEEWNED CTD:2314 EMBL:U80184 EMBL:AK295655 EMBL:AC127537
EMBL:BC025300 EMBL:U01184 IPI:IPI00031023 IPI:IPI01013074
PIR:A49674 RefSeq:NP_001243193.1 RefSeq:NP_001243194.1
RefSeq:NP_002009.1 UniGene:Hs.513984 ProteinModelPortal:Q13045
SMR:Q13045 IntAct:Q13045 MINT:MINT-1399971 STRING:Q13045
PhosphoSite:Q13045 DMDM:18202493 PaxDb:Q13045 PeptideAtlas:Q13045
PRIDE:Q13045 DNASU:2314 Ensembl:ENST00000327031
Ensembl:ENST00000545457 GeneID:2314 KEGG:hsa:2314 UCSC:uc002gsq.1
GeneCards:GC17M018148 HGNC:HGNC:3750 HPA:CAB016132 HPA:HPA007084
HPA:HPA008903 MIM:182290 MIM:600362 neXtProt:NX_Q13045 Orphanet:819
PharmGKB:PA28171 HOVERGEN:HBG051627 InParanoid:Q13045
OrthoDB:EOG4TB49G PhylomeDB:Q13045 ChiTaRS:FLII GenomeRNAi:2314
NextBio:9397 ArrayExpress:Q13045 Bgee:Q13045 CleanEx:HS_FLII
Genevestigator:Q13045 GermOnline:ENSG00000177731 Uniprot:Q13045
Length = 1269
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 87/283 (30%), Positives = 135/283 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+T L WL LN L L +L L KL+ L + N L L ++ L ++ A N +
Sbjct: 32 MTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSL 91
Query: 62 TSL---DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+ D + + L L V ++ NQ+T R E +N N+ ++L +N I ++ N
Sbjct: 92 KNSGVPDDIFK-LDDLSVLDLSHNQLTECPR-ELENAKNMLVLNLSHNSIDTIPNQLFIN 149
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
LT L YL LS N+L E L +R L L+T+ L+ N + R Q+ +T + L
Sbjct: 150 LTDLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLR-----QLPAMTALQTL 203
Query: 178 KLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L+ + NL +L G+ L+ +DLS N L + P+ L SL+ L++S N +T L
Sbjct: 204 HLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV-PECLYTLPSLRRLNLSSNQITELS 262
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
++ +E L +S N LT L L L K L N +
Sbjct: 263 LCIDQWVH-VETLNLSRNQLTSLPSAICKLSKLKKLYLNSNKL 304
Score = 226 (84.6 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 72/269 (26%), Positives = 133/269 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--ALPSDIQLFSQLGSLYANNN 59
L L L +++N L +L G+L +L L+ +V N L+ +P DI L L ++N
Sbjct: 55 LQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHN 114
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++T L + V N+ N I + F NL +L + L N++ S+ + L
Sbjct: 115 QLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLESLPPQMRRLV 174
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ N L L + + L+T+ L + T++ ++G++N+ ++ L
Sbjct: 175 HLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQ----RTQSNLPTSLEGLSNLADVDL 230
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISP--DDFIGLDSLKMLDISHNLLTTLEET 237
N++ + L + L RL+LS N++ +S D ++ +++L ++S N LT+L +
Sbjct: 231 SCNDLTRVPECLYTLPSLRRLNLSSNQITELSLCIDQWVHVETL---NLSRNQLTSLP-S 286
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLP 266
+ L L++L+++ N L DF GLP
Sbjct: 287 AICKLSKLKKLYLNSNKL-----DFDGLP 310
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 63/246 (25%), Positives = 114/246 (46%)
Query: 42 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
P +++ + L L N + L L L KL+ ++ N +T + E +L +L +I
Sbjct: 26 PENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAI 84
Query: 102 SLQNNQI--TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ N + + + + L L+ L LSHNQLTE ++ K + ++LS+N I+
Sbjct: 85 VARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTE-CPRELENAKNMLVLNLSHNSIDTI- 142
Query: 160 TRNEGKNQVQ-GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
NQ+ +T++ L L N +E+L + + L L L+ N L +
Sbjct: 143 -----PNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAM 197
Query: 219 DSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+L+ L + T TS L L ++ +S N LTR+ + + LP L + +L+ N
Sbjct: 198 TALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPSLRRLNLSSNQ 257
Query: 278 IKAINI 283
I +++
Sbjct: 258 ITELSL 263
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 72/314 (22%), Positives = 132/314 (42%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L L + N LK+ + + L L +L + NQL P +++ + L ++N
Sbjct: 78 LPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTECPRELENAKNMLVLNLSHN 137
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I ++ L LT L ++ N++ + + + L +L ++ L N + L
Sbjct: 138 SIDTIPNQLFINLTDLLYLDLSENRLESLP-PQMRRLVHLQTLVLNGNPLLHAQLRQLPA 196
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+T L L+L Q T+ L + GL L VDLS N + + + + ++
Sbjct: 197 MTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV------PECLYTLPSLRR 250
Query: 177 LKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I L + +H + L+LS N+L ++ P L LK L ++ N L
Sbjct: 251 LNLSSNQITELSLCIDQWVH-VETLNLSRNQLTSL-PSAICKLSKLKKLYLNSNKLDFDG 308
Query: 236 ETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
S L LEE ++N+L + + P L K L N++ + + T+ ++
Sbjct: 309 LPSGIGKLTNLEEFMAANNNLELVPESLCRCPKLRKLVLNKNHLVTLPEAIHFLTEIEVL 368
Query: 295 GLNSTLRIYLEGNP 308
+ + + P
Sbjct: 369 DVRENPNLVMPPKP 382
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 232 (86.7 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 72/236 (30%), Positives = 116/236 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L+ L L L+NN++KSL L L+ L + N L+ P I+ L L ++N
Sbjct: 200 LSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEFPQAIKALPSLKELGFHSNS 259
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
I+ + DG G L+ ++ N ++ V F NL +L S+ ++ + +L+G
Sbjct: 260 ISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPNLAGTV 319
Query: 120 KLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L L+ +++ + DD+ + K LRT+DLSYN I + N G + E+
Sbjct: 320 HLESLTLTGTKISS-IPDDLCQNQKMLRTLDLSYNDIRDLPSFN-------GCRALEEIS 371
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
LQ N+I + + G+ L LDLS N +R I F L ++ LD+S N LT+
Sbjct: 372 LQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS 427
Score = 216 (81.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 71/248 (28%), Positives = 120/248 (48%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P + F+Q + NN IT L + + L+ + N ++ + L
Sbjct: 48 LTAVPEGLSAFTQALDISMNN--ITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLK 105
Query: 97 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L ++LQNNQ+ ++ S ++ GL+ L L L N +T D GL +LR + L N +
Sbjct: 106 ELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNIL 165
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD 214
+ R + + + L L N I ++ D A + L L L +NK++++S
Sbjct: 166 TEVPVR-----PLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHC 220
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADL 273
F GLD+L+ LD+++N L + K LP+L+EL NS++ + D F G P+L L
Sbjct: 221 FDGLDNLETLDLNYNNLDEFPQAIKA-LPSLKELGFHSNSISVIPDGAFAGNPLLRTIHL 279
Query: 274 AHNNIKAI 281
N + +
Sbjct: 280 YDNPLSFV 287
Score = 212 (79.7 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 79/282 (28%), Positives = 136/282 (48%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L L L N L + + L L +L++L ++ NQL+ +PS+ I+ S L SL + N IT
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 63 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
S+ + GL +L+ +D N +T V NL L +++L N I+S+ + + + L+
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSS 202
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L+L +N++ GL L T+DL+YN +++F ++ + ++ EL
Sbjct: 203 LVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEF------PQAIKALPSLKELGFH 256
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI-SHNLLTTLEETS 238
N I + DGA G L + L N L + F L L L I +L+ +
Sbjct: 257 SNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPNLA 316
Query: 239 KTFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIK 279
T LE L ++ ++ + D +L DL++N+I+
Sbjct: 317 GTV--HLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIR 356
Score = 174 (66.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 74/285 (25%), Positives = 127/285 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL +L L L NN+LK++ + + LS LQ L ++ N + ++P D + QL L+ ++
Sbjct: 103 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LS 116
N +T + L L LQ + N I+ + F NL +L + L NN+I S++
Sbjct: 163 NILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFD 222
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L++N L EF I+ L L+ + N I+ N + ++++
Sbjct: 223 GLDNLETLDLNYNNLDEFP-QAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYD 281
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L + N A + L L + L P+ G L+ L ++ ++++ +
Sbjct: 282 NPLSF--VGN--SAFHNLSDLHSLVIRGASLVQWFPN-LAGTVHLESLTLTGTKISSIPD 336
Query: 237 TSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L L +S+N + L F+G L + L N I I
Sbjct: 337 DLCQNQKMLRTLDLSYNDIRDLPS-FNGCRALEEISLQRNQISLI 380
Score = 173 (66.0 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 77/289 (26%), Positives = 132/289 (45%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN- 58
GL+ L L L+ N + S+ E L +L+ L ++ N L +P ++ S L +L A
Sbjct: 127 GLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVP--VRPLSNLPTLQALTL 184
Query: 59 --NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N I+S+ D L+ L V ++ N+I + + F L NL+++ L N + ++
Sbjct: 185 ALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLDEFPQAI 244
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L L L N ++ G LRT+ L N ++ F G + ++++
Sbjct: 245 KALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLS-F----VGNSAFHNLSDLH 299
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI-GLDSLKMLDISHNLLTTL 234
L ++ + L G L L L+ K+ +I PDD L+ LD+S+N + L
Sbjct: 300 SLVIRGASLVQWFPNLAGTVHLESLTLTGTKISSI-PDDLCQNQKMLRTLDLSYNDIRDL 358
Query: 235 EETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAIN 282
S ALEE+ + N ++ + + F GL L DL+ N I+ I+
Sbjct: 359 P--SFNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIH 405
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 56/189 (29%), Positives = 86/189 (45%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
L + L +N L + LS L LVI L ++ L SL +I+S
Sbjct: 274 LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPNLAGTVHLESLTLTGTKISS 333
Query: 64 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKL 121
+ D L + L+ ++ +N I + F L+ ISLQ NQI+ + ++ GLT L
Sbjct: 334 IPDDLCQNQKMLRTLDLSYNDIRDL--PSFNGCRALEEISLQRNQISLIKETTFQGLTSL 391
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQGVTNIFELK-- 178
L LS N + E L + +D+S+N++ F T G NQ++ V N F+LK
Sbjct: 392 RILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLVGN-FQLKDA 450
Query: 179 LQHNEIENL 187
L + NL
Sbjct: 451 LAARDFANL 459
Score = 130 (50.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 57/231 (24%), Positives = 106/231 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL-GSLYANNN 59
GL +L L LN N L + L L+ L N + +P + L +++ +N
Sbjct: 223 GLDNLETLDLNYNNLDEFPQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDN 282
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMNSSL 115
++ + + L+ L ++ ++V+ F NL +L+S++L +I+S+ L
Sbjct: 283 PLSFVGNSAFHNLSDLH--SLVIRGASLVQW--FPNLAGTVHLESLTLTGTKISSIPDDL 338
Query: 116 SGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
K L L LS+N + + L G + L + L N+I+ + QG+T++
Sbjct: 339 CQNQKMLRTLDLSYNDIRD--LPSFNGCRALEEISLQRNQISLIK-----ETTFQGLTSL 391
Query: 175 FELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
L L N I + GA + ++ LD+S N+L + + GL+ LK++
Sbjct: 392 RILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLV 442
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 231 (86.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 84/339 (24%), Positives = 161/339 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLG-TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
G L L ++NN ++ ++ + L L++L I +N+L +P L L +N
Sbjct: 74 GFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLARIPRGSHELGHLEKLDLRSN 133
Query: 60 RITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSG 117
I+++ L L ++ ++ N I+ + + N++ + L +N IT + + S
Sbjct: 134 LISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSS 193
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L L L+ N +T L++L ++DL+ N I + R NQ+ + N+
Sbjct: 194 FNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIRE--VRFLAFNQLPSLQNV--- 248
Query: 178 KLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L N++ LD G GL L+LS N+++ ++ GL SL++LD+S+N + +
Sbjct: 249 SLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHI 308
Query: 237 TSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFG 295
+S + P L+ L + N + L F L L + L+ N+I +++ + AL +
Sbjct: 309 SSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDSLH-KFALVGMSSLHK 367
Query: 296 LN---STLRIYLEGNPVLCDDSMRAVIDAMETINNNTKI 331
L+ +TL + +E VL + SM + ++ NN ++
Sbjct: 368 LDLSSNTLAVCVEDGAVLYNTSM-PFLRSLRFTNNQLRV 405
Score = 192 (72.6 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 71/274 (25%), Positives = 128/274 (46%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L +P+ I +++ L ++N I S+D L+G LQ ++ N I + + F NL
Sbjct: 43 LSEIPTTIPNNTRI--LLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLP 100
Query: 97 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
NL ++++ N++ + L L L L N ++ +++ L +R+VDLS N I+
Sbjct: 101 NLKILNIRKNRLARIPRGSHELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLIS 160
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDF 215
K NI +L L N I ++ + L L L+ N + T++ F
Sbjct: 161 YLP-----KPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSF 215
Query: 216 IGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAH 275
L L+ LD++ N++ + + LP+L+ + ++ N + RLD G+ C+ L H
Sbjct: 216 SRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDD---GMFYACEG-LKH 271
Query: 276 NNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV 309
N+ +Q T+ +FGL S + L N +
Sbjct: 272 LNLSTNRVQAV--TEGWMFGLTSLEVLDLSYNQI 303
Score = 156 (60.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 65/260 (25%), Positives = 114/260 (43%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLD 65
L L +N + + + + L L + +N + L +L SL N I +
Sbjct: 176 LDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIREVR 235
Query: 66 GL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAY 123
L L LQ ++ N + + F L ++L N++ ++ + GLT L
Sbjct: 236 FLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEV 295
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L LS+NQ+ F + +L+ + L N+I + G +V + + EL L N
Sbjct: 296 LDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPS---GSFRV--LRQLEELILSANS 350
Query: 184 IENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFI----GLDSLKMLDISHNLLTTLEETS 238
I++L AL+G+ L +LDLS N L D + + L+ L ++N L + + +
Sbjct: 351 IDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRSLRFTNNQLRVIPKRA 410
Query: 239 KTFLPALEELFVSHNSLTRL 258
PALEEL ++ N + +
Sbjct: 411 FERFPALEELDLTDNPIATI 430
Score = 151 (58.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 69/260 (26%), Positives = 120/260 (46%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY----ANNNRIT 62
L L N + +L + L KL+ L + +N + + F+QL SL A N+
Sbjct: 200 LKLARNHITTLNQFSFSRLRKLESLDLTRNMIREVR--FLAFNQLPSLQNVSLARNDVYR 257
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKL 121
DG+ L+ N+ N++ V L +L+ + L NQI S + SS S KL
Sbjct: 258 LDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKL 317
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+L L N++ R L++L + LS N I+ K + G++++ +L L
Sbjct: 318 KWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDSLH-----KFALVGMSSLHKLDLSS 372
Query: 182 NEIENL--DGALM---GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
N + DGA++ + L L ++N+LR I F +L+ LD++ N + T+
Sbjct: 373 NTLAVCVEDGAVLYNTSMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHP 432
Query: 237 TSKTFLPA-LEELFVSHNSL 255
+ F P L+ L ++ +S+
Sbjct: 433 --EAFEPLELKRLVMNSSSI 450
Score = 144 (55.7 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 59/236 (25%), Positives = 107/236 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN--N 58
L L L L N ++ + L LQ + + +N + L D ++ G + N
Sbjct: 218 LRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRL-DDGMFYACEGLKHLNLST 276
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
NR+ ++ +G + GLT L+V ++ +NQI + + L +SL +N+I S+ S S
Sbjct: 277 NRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFR 336
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L +L L LS N + + G+ L +DLS N + + + +
Sbjct: 337 VLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTL-AVCVEDGAVLYNTSMPFLRS 395
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
L+ +N++ + A L LDL+ N + TI P+ F L+ +++ S ++L
Sbjct: 396 LRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAFEPLELKRLVMNSSSIL 451
Score = 38 (18.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 276 NNIKAINIQLALKTQCQIFGL 296
+NIK+ + L C FGL
Sbjct: 830 DNIKSTGNGIYLMASCSAFGL 850
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 232 (86.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 90/332 (27%), Positives = 160/332 (48%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYANNNRIT 62
L L L++N + ++ L+ L + N++ L + L L + N NRI+
Sbjct: 145 LESLDLSSNIISEIKTSSFPRMSLKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRIS 204
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKL 121
+ + L LQ + N+I +V FQ L +L S+ +Q N I+ + + + GL +
Sbjct: 205 MIPPKVFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNM 264
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L HN LT + GL+ L+ + +S N I K + + + EL L +
Sbjct: 265 EELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISP-----DAWEFCQRLSELDLSY 319
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT-TLEETSK 239
N++ LD A +G+ L RL+L N++ I+ F L +L+ LD+ +N ++ +E+ S+
Sbjct: 320 NQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASE 379
Query: 240 TF--LPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGL 296
F L +L +L + N + + K F GL L DL +N I ++IQ +Q + GL
Sbjct: 380 AFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAI--MSIQENAFSQTHLKGL 437
Query: 297 NSTLRIYLEGNPVLCDDSMRAVIDAMETINNN 328
L + +LCD ++ ++ + ++NN
Sbjct: 438 ------VLNTSSLLCDCHLKWLLQWL--VDNN 461
Score = 229 (85.7 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 77/284 (27%), Positives = 144/284 (50%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
+D++ L L++NRL + L + + LQ + + N+L +P + + L +N I
Sbjct: 74 SDISSLDLSHNRLSNWNNTLESQT-LQEVKMNYNELTEIPYFGEPTPNITLLSLVHNLIP 132
Query: 63 SLDGLLRGL-TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLT- 119
++ L + L+ ++ N I+ ++ F + +L ++L NN+I+++ + L+
Sbjct: 133 EINAEAFELYSALESLDLSSNIISEIKTSSFPRM-SLKYLNLSNNRISTLEAGCFDNLSD 191
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L + L+ N+++ + + L L+ ++L N+I EG QG+ ++ LK+
Sbjct: 192 SLLVVKLNRNRIS-MIPPKVFKLPHLQFLELKRNRIKIV----EGLT-FQGLDSLRSLKM 245
Query: 180 QHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
Q N I L DGA G++ + L+L HN L ++ GL L+ L +S N + + +
Sbjct: 246 QRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDA 305
Query: 239 KTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
F L EL +S+N LTRLD+ F GL +L + +L N + I
Sbjct: 306 WEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHI 349
Score = 209 (78.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 84/318 (26%), Positives = 150/318 (47%)
Query: 4 DLNWLFLNNNRLKSLEGQLGTL-SKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN--NNR 60
++ L L +N + + + L S L+ L + N + + + F ++ Y N NNR
Sbjct: 120 NITLLSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSS--FPRMSLKYLNLSNNR 177
Query: 61 ITSLD-GLLRGLT-KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSG 117
I++L+ G L+ L V ++ N+I+M+ F+ L +L + L+ N+I + + G
Sbjct: 178 ISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFK-LPHLQFLELKRNRIKIVEGLTFQG 236
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L L L + N +++ GL + ++L +N + G N+G + G+ + +L
Sbjct: 237 LDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLT--GV-NKG--WLYGLRMLQQL 291
Query: 178 KLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
+ N IE + A LS LDLS+N+L + F+GL L+ L++ N +T + +
Sbjct: 292 YMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIAD 351
Query: 237 TSKTFLPALEELFVSHNSLTRLDKD----FHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
FL L+ L + +N ++ +D F GL L K L N IK++ TQ
Sbjct: 352 GVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSV-------TQKA 404
Query: 293 IFGLNSTLRIYLEGNPVL 310
GL S + L N ++
Sbjct: 405 FIGLESLEYLDLNNNAIM 422
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 65/220 (29%), Positives = 108/220 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLF--SQLGSLYANN 58
L L +L L NR+K +EG L L+ L +++N + L D F + + L +
Sbjct: 213 LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKL-KDGAFFGLNNMEELELEH 271
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N +T ++ G L GL LQ M N I + D ++ L + L NQ+T ++ S+
Sbjct: 272 NNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFV 331
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL+ L L L N++T R L L+T+DL N I+ + G+ ++ +
Sbjct: 332 GLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDIS--WAIEDASEAFSGLKSLTK 389
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDF 215
L LQ N I+++ A +G+ L LDL++N + +I + F
Sbjct: 390 LILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAF 429
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 53/245 (21%), Positives = 105/245 (42%)
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L G + ++D + + + L + + N++T + + L L
Sbjct: 68 LSGPLPSDISSLDLSHNRLSNWNNTLESQTLQEVKMNYNELTEIPYFGEPTPNITLLSLV 127
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
HN + E + L ++DLS N I++ T + + ++ L L +N I L
Sbjct: 128 HNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRMSLK------YLNLSNNRISTL 181
Query: 188 D-GALMGIH-GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPAL 245
+ G + L + L+ N++ I P F L L+ L++ N + +E + L +L
Sbjct: 182 EAGCFDNLSDSLLVVKLNRNRISMIPPKVF-KLPHLQFLELKRNRIKIVEGLTFQGLDSL 240
Query: 246 EELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYL 304
L + N +++L D F GL + + +L HNN+ +N + ++GL ++Y+
Sbjct: 241 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVN-------KGWLYGLRMLQQLYM 293
Query: 305 EGNPV 309
N +
Sbjct: 294 SQNAI 298
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 230 (86.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 76/250 (30%), Positives = 119/250 (47%)
Query: 28 LQLLVIEQNQLEALPSDIQLFSQLGSLYAN-NNRITSLDGLLRGLTKLQVFNMDFNQITM 86
+Q LVI+ N+L+ + S +Q ++QL L + N+ +T + KLQ ++D N+I
Sbjct: 74 IQRLVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQ 133
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
V F L + ++L+ N I + + S + KLA L L N+++ + GL L
Sbjct: 134 VSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNL 193
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSH 204
R + L N + T G+ Q + ++ EL L N + G A + GL+RLDL
Sbjct: 194 RVLYLDDNTL----TTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRG 249
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FH 263
L IS D GL SL+ LD+S N L + + L LE+L + N + F
Sbjct: 250 AGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFS 309
Query: 264 GLPVLCKADL 273
GL L +L
Sbjct: 310 GLRELRHLEL 319
Score = 193 (73.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 82/283 (28%), Positives = 131/283 (46%)
Query: 5 LNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNN 59
L L L++N++ + + LG LS + +L + N + L + + FS +L L N
Sbjct: 121 LQELHLDHNKIGQVSNKTFLG-LSTISVLNLRGNLIAEL--EYRTFSPMVKLAELNLGQN 177
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRD-EFQNLHNLDSISLQNNQ-ITSMNSSLS 116
RI+ +D L GL L+V +D N +T V + FQ LH+L + L N +T +
Sbjct: 178 RISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQ 237
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L L L D ++GL LR +DLS N++ T Q + + +
Sbjct: 238 DLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTA-----AFQRLGRLEQ 292
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSH-NKLRTISPDDFIGLDSLKMLDISHNL-LTT 233
L + N+ E + GA G+ L L+L+ +LR + F G +L+ L++S N L
Sbjct: 293 LNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNE 352
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
L + LP L + + N L+ LD+ L DL+ N
Sbjct: 353 LSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQTLDLSEN 395
Score = 192 (72.6 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 81/307 (26%), Positives = 139/307 (45%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLDG 66
L + NN+LK+++ + ++L L + N + +P ++L L+ ++N+I +
Sbjct: 77 LVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSN 136
Query: 67 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 124
GL+ + V N+ N I + F + L ++L N+I+ ++ +L GL L L
Sbjct: 137 KTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVL 196
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQ-VQGVTNIFELKLQHNE 183
YL N LT + ++ + L ++ Y N F T G Q ++G+T L L+
Sbjct: 197 YLDDNTLTT-VPGELT-FQALHSLAELYLGTNSFMTIPGGAFQDLKGLTR---LDLRGAG 251
Query: 184 IENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+ N+ G AL G+ L LDLS N+L I F L L+ L+I N + + + L
Sbjct: 252 LHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGL 311
Query: 243 PALEEL-FVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTL 300
L L L R++ F G +L H N+ + N QL + + GL
Sbjct: 312 RELRHLELTGAQRLRRVESGAFSG-----NTNLEHLNLSS-NKQLNELSSIALGGLPHLS 365
Query: 301 RIYLEGN 307
+ L+ N
Sbjct: 366 TVVLKAN 372
Score = 154 (59.3 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 59/252 (23%), Positives = 108/252 (42%)
Query: 35 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 94
+ L+ LP I L + L NN++ ++D ++ +L ++ FN + + F
Sbjct: 60 EGTLDVLP--IALNPAIQRLVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAY 117
Query: 95 LHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 153
L + L +N+I + N + GL+ ++ L L N + E + +L ++L N
Sbjct: 118 HAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQN 177
Query: 154 KINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGAL--MGIHGLSRLDLSHNKLRTIS 211
+I+ + + G+ N+ L L N + + G L +H L+ L L N TI
Sbjct: 178 RISHIDP-----HALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIP 232
Query: 212 PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCK 270
F L L LD+ L + + L +L L +S N L + F L L +
Sbjct: 233 GGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQ 292
Query: 271 ADLAHNNIKAIN 282
++ N+ + I+
Sbjct: 293 LNIGQNDFEVIS 304
Score = 149 (57.5 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 57/212 (26%), Positives = 100/212 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLG--TLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYAN 57
GL +L L+L++N L ++ G+L L L L + N +P Q L L
Sbjct: 189 GLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLR 248
Query: 58 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SL 115
+ ++ G L+GL L+ ++ N++ + FQ L L+ +++ N ++S +
Sbjct: 249 GAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAF 308
Query: 116 SGLTKLAYLYLSHNQ-LTEFLLDDIRGLKRLRTVDLSYNK-INKFGTRNEGKNQVQGVTN 173
SGL +L +L L+ Q L G L ++LS NK +N+ + G G+ +
Sbjct: 309 SGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALG-----GLPH 363
Query: 174 IFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+ + L+ N++ +LD L+ L LDLS N
Sbjct: 364 LSTVVLKANQLSSLDEGLVPWADLQTLDLSEN 395
Score = 41 (19.5 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLDKDF 262
L+TTL T + E+ H++L R ++++
Sbjct: 466 LITTLALVLYTCRHRIREMLKGHSALGRKEREY 498
>RGD|621818 [details] [associations]
symbol:Omd "osteomodulin" species:10116 "Rattus norvegicus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030500 "regulation
of bone mineralization" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:621818 GO:GO:0005578
eggNOG:COG4886 GO:GO:0007155 GO:GO:0030500 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000234447 HOVERGEN:HBG108061
CTD:4958 KO:K08124 OrthoDB:EOG415GDJ EMBL:AF104362 IPI:IPI00209178
RefSeq:NP_114005.1 UniGene:Rn.30124 ProteinModelPortal:Q9Z1S7
STRING:Q9Z1S7 PRIDE:Q9Z1S7 GeneID:83717 KEGG:rno:83717
InParanoid:Q9Z1S7 NextBio:616285 Genevestigator:Q9Z1S7
GermOnline:ENSRNOG00000039560 Uniprot:Q9Z1S7
Length = 423
Score = 225 (84.3 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 69/234 (29%), Positives = 118/234 (50%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
S+Y +N ++ ++ + + +L N+ FN I V D F N +L I+L +N+I S
Sbjct: 75 SMYCDNRKLKTIPDIPMHIQQL---NLQFNDIEAVTADSFINATHLKEINLSHNKIKSQK 131
Query: 113 SS---LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
+ L+ L L+L HN L EF + L+RL L YN+I+ T + +
Sbjct: 132 IDYGVFAKLSNLQQLHLDHNNLEEFPFPLPKSLERLL---LGYNEISTLPT-----HAMD 183
Query: 170 GVTNIFELKLQHNEIEN--LDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLD-SLKMLD 225
G+ N+ L L +N + + L G ++ + L +L+L +N+L ++ P GL SL L
Sbjct: 184 GLVNVTMLDLCYNHLSDSTLKGKILSKLEKLMQLNLCNNRLESMPP----GLPLSLMYLS 239
Query: 226 ISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIK 279
+ +N ++++ E LP L L +SHN L + D L L + ++ HN +K
Sbjct: 240 LENNSISSIPEDYFQKLPKLHALRISHNKLEDIPYDIFNLSNLIELNVGHNKLK 293
Score = 144 (55.7 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 63/233 (27%), Positives = 110/233 (47%)
Query: 3 TDLNWLFLNNNRLKSLE---GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L + L++N++KS + G LS LQ L ++ N LE P L L L N
Sbjct: 115 THLKEINLSHNKIKSQKIDYGVFAKLSNLQQLHLDHNNLEEFP--FPLPKSLERLLLGYN 172
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQIT--MVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
I++L + GL + + ++ +N ++ ++ L L ++L NN++ SM L
Sbjct: 173 EISTLPTHAMDGLVNVTMLDLCYNHLSDSTLKGKILSKLEKLMQLNLCNNRLESMPPGLP 232
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK-----FGTRN--E---GKN 166
L YL L +N ++ D + L +L + +S+NK+ F N E G N
Sbjct: 233 --LSLMYLSLENNSISSIPEDYFQKLPKLHALRISHNKLEDIPYDIFNLSNLIELNVGHN 290
Query: 167 QVQGV----TNIFELKLQHNEIENLDGALM--GI-----HGLSRLDLSHNKLR 208
+++ N+ L LQ+NEI++++ +M + H L+ L + NKL+
Sbjct: 291 KLKQAFYIPRNLEHLYLQNNEIQSINVTMMCPSLDPLHHHHLTYLRVDQNKLK 343
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 52/192 (27%), Positives = 93/192 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNR 60
L L L L NNRL+S+ L LS L L +E N + ++P D Q +L +L ++N+
Sbjct: 211 LEKLMQLNLCNNRLESMPPGL-PLS-LMYLSLENNSISSIPEDYFQKLPKLHALRISHNK 268
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ + + L+ L N+ N++ + F NL+ + LQNN+I S+N ++
Sbjct: 269 LEDIPYDIFNLSNLIELNVGHNKL----KQAFYIPRNLEHLYLQNNEIQSINVTMM-CPS 323
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRT-VDLSYNKINK--FGT-RNEGKNQVQGVTNIFE 176
L L+ H+ LT +D + + + + + + +I+ +G R+ +Q T +F
Sbjct: 324 LDPLH--HHHLTYLRVDQNKLKEPISSYIFFCFPRIHSIYYGEQRSTNGETIQLKTQVFR 381
Query: 177 LKLQHNEIENLD 188
+ Q E E D
Sbjct: 382 -RYQDEEEEEED 392
>MGI|MGI:1890169 [details] [associations]
symbol:Erbb2ip "Erbb2 interacting protein" species:10090
"Mus musculus" [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006605
"protein targeting" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016323 "basolateral plasma membrane"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030056
"hemidesmosome" evidence=ISO] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
MGI:MGI:1890169 GO:GO:0005737 GO:GO:0006605 GO:GO:0031965
eggNOG:COG4886 GO:GO:0016323 SUPFAM:SSF50156 InterPro:IPR025875
Pfam:PF12799 GO:GO:0030056 GeneTree:ENSGT00650000093182 CTD:55914
HOVERGEN:HBG052305 KO:K12796 OMA:HNNVRAN OrthoDB:EOG41JZBG
EMBL:AK122473 EMBL:AC154310 EMBL:CT009728 EMBL:AK029054
EMBL:AK051733 EMBL:BC005691 EMBL:BC028256 EMBL:AF263743
IPI:IPI00454041 IPI:IPI00457485 IPI:IPI00896710
RefSeq:NP_001005868.1 RefSeq:NP_067538.2 UniGene:Mm.277354
ProteinModelPortal:Q80TH2 SMR:Q80TH2 MINT:MINT-138078 STRING:Q80TH2
PhosphoSite:Q80TH2 PaxDb:Q80TH2 PRIDE:Q80TH2
Ensembl:ENSMUST00000022222 Ensembl:ENSMUST00000053927
Ensembl:ENSMUST00000091269 GeneID:59079 KEGG:mmu:59079
UCSC:uc007rsm.1 NextBio:314720 Bgee:Q80TH2 CleanEx:MM_ERBB2IP
Genevestigator:Q80TH2 GermOnline:ENSMUSG00000021709 Uniprot:Q80TH2
Length = 1402
Score = 233 (87.1 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 83/293 (28%), Positives = 136/293 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +N
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T + +L L+ L+ F MD N++T + +L L + + N I + +S L
Sbjct: 197 TEVPEVLEQLSGLREFWMDGNRLTFIP-GFIGSLRQLTYLDVSKNNIEMVEEGISTCENL 255
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
LS N L + L + I LK + T+ + N++ + + G+ +I EL
Sbjct: 256 QDFLLSSNSLQQ-LPETIGSLKNVTTLKIDENQLMYL------PDSIGGLRSIEELDCSF 308
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
NEIE L ++ + + HN L+ + P+ IG ++ +L + N L TL E
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPPE--IGNWKNITVLFLHCNKLETLPEEMGD 366
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKA-INIQLALKTQCQ 292
+ L+ + +S N L L F L L L+ N K I +Q T+ Q
Sbjct: 367 -MQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDTETQ 418
Score = 189 (71.6 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 76/304 (25%), Positives = 129/304 (42%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKLP-DGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L NQL + L + L +L +DL N+ + E Q+ G+ E + N +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTEVP---EVLEQLSGLR---EFWMDGNRL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ G + + L+ LD+S N + + + ++L+ +S N L L ET + L
Sbjct: 220 TFIPGFIGSLRQLTYLDVSKNNIEMVE-EGISTCENLQDFLLSSNSLQQLPETIGS-LKN 277
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYL 304
+ L + N L L GL + + D + N I+A+ + T + F + YL
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHN---YL 334
Query: 305 EGNP 308
+ P
Sbjct: 335 QQLP 338
Score = 187 (70.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 65/257 (25%), Positives = 113/257 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L LTKLQ+ + NQ+ M+ + L L+ + L +N+ T + L L+ L
Sbjct: 151 EFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
++ N+LT F+ I L++L +D+S N I EG + N+ + L
Sbjct: 210 REFWMDGNRLT-FIPGFIGSLRQLTYLDVSKNNIEMV---EEG---ISTCENLQDFLLSS 262
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++ L + + ++ L + N+L + PD GL S++ LD S N + L +S
Sbjct: 263 NSLQQLPETIGSLKNVTTLKIDENQLMYL-PDSIGGLRSIEELDCSFNEIEALP-SSIGQ 320
Query: 242 LPALEELFVSHNSLTRL 258
L + HN L +L
Sbjct: 321 LTNMRTFAADHNYLQQL 337
>RGD|1307590 [details] [associations]
symbol:Flii "flightless I homolog (Drosophila)" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0007275 "multicellular organismal development"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 RGD:1307590 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 eggNOG:COG4886
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626 EMBL:CH473948
GeneTree:ENSGT00660000095502 HOGENOM:HOG000016110 OMA:MEEWNED
CTD:2314 HOVERGEN:HBG051627 OrthoDB:EOG4TB49G EMBL:BC085829
IPI:IPI00211698 RefSeq:NP_001008280.1 UniGene:Rn.144698
STRING:Q5RKI5 Ensembl:ENSRNOT00000006753 GeneID:287375
KEGG:rno:287375 UCSC:RGD:1307590 InParanoid:Q5RKI5 NextBio:625981
Genevestigator:Q5RKI5 Uniprot:Q5RKI5
Length = 1270
Score = 232 (86.7 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 74/269 (27%), Positives = 133/269 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--ALPSDIQLFSQLGSLYANNN 59
L L L +++N L +L G+L +L L+ +V N L+ +P DI L L ++N
Sbjct: 55 LQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHN 114
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++T L + V N+ N I + F NL +L + L N++ S+ + L
Sbjct: 115 QLTECPRELENAKNMLVLNLSHNSIDSIPNQLFINLTDLLYLDLSENRLESLPPQMRRLV 174
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ N L L + + L+T+ L N T++ ++G++N+ ++ L
Sbjct: 175 HLQTLVLNGNPLLHAQLRQLPAMMALQTLHLR----NTQRTQSNLPTSLEGLSNLSDVDL 230
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISP--DDFIGLDSLKMLDISHNLLTTLEET 237
N++ + L + L RL+LS N++ +S D ++ L++L ++S N LT+L +
Sbjct: 231 SCNDLTRVPECLYTLPNLHRLNLSSNQIAELSLCIDQWVHLETL---NLSRNQLTSLP-S 286
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLP 266
+ L L++L+++ N L DF GLP
Sbjct: 287 AICKLTKLKKLYLNSNKL-----DFDGLP 310
Score = 228 (85.3 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 87/283 (30%), Positives = 133/283 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+T L WL LN L L +L L KL+ L + N L L ++ L ++ A N +
Sbjct: 32 MTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSL 91
Query: 62 TSL---DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+ D + + L L V ++ NQ+T R E +N N+ ++L +N I S+ N
Sbjct: 92 KNSGVPDDIFK-LDDLSVLDLSHNQLTECPR-ELENAKNMLVLNLSHNSIDSIPNQLFIN 149
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
LT L YL LS N+L E L +R L L+T+ L+ N + R Q+ + + L
Sbjct: 150 LTDLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLR-----QLPAMMALQTL 203
Query: 178 KLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L++ + NL +L G+ LS +DLS N L + P+ L +L L++S N + L
Sbjct: 204 HLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRV-PECLYTLPNLHRLNLSSNQIAELS 262
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
++ LE L +S N LT L L L K L N +
Sbjct: 263 LCIDQWVH-LETLNLSRNQLTSLPSAICKLTKLKKLYLNSNKL 304
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 63/246 (25%), Positives = 115/246 (46%)
Query: 42 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
P +++ + L L N + L L L KL+ ++ N +T + E +L +L +I
Sbjct: 26 PENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAI 84
Query: 102 SLQNNQI--TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ N + + + + L L+ L LSHNQLTE ++ K + ++LS+N I+
Sbjct: 85 VARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTE-CPRELENAKNMLVLNLSHNSIDSI- 142
Query: 160 TRNEGKNQVQ-GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
NQ+ +T++ L L N +E+L + + L L L+ N L +
Sbjct: 143 -----PNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAM 197
Query: 219 DSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+L+ L + + T TS L L ++ +S N LTR+ + + LP L + +L+ N
Sbjct: 198 MALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVPECLYTLPNLHRLNLSSNQ 257
Query: 278 IKAINI 283
I +++
Sbjct: 258 IAELSL 263
Score = 160 (61.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 74/314 (23%), Positives = 132/314 (42%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L L + N LK+ + + L L +L + NQL P +++ + L ++N
Sbjct: 78 LPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTECPRELENAKNMLVLNLSHN 137
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I S+ L LT L ++ N++ + + + L +L ++ L N + L
Sbjct: 138 SIDSIPNQLFINLTDLLYLDLSENRLESLP-PQMRRLVHLQTLVLNGNPLLHAQLRQLPA 196
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+ L L+L + Q T+ L + GL L VDLS N + + + + N+
Sbjct: 197 MMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRV------PECLYTLPNLHR 250
Query: 177 LKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I L + +H L L+LS N+L ++ P L LK L ++ N L
Sbjct: 251 LNLSSNQIAELSLCIDQWVH-LETLNLSRNQLTSL-PSAICKLTKLKKLYLNSNKLDFDG 308
Query: 236 ETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
S L +LEE ++N+L + + P L K L N + + + T+ ++
Sbjct: 309 LPSGIGKLTSLEEFMAANNNLELIPESLCRCPKLRKLVLNKNRLVTLPEAIHFLTEIEVL 368
Query: 295 GLNSTLRIYLEGNP 308
+ + + P
Sbjct: 369 DVRENPSLVMPPKP 382
>MGI|MGI:1342286 [details] [associations]
symbol:Flii "flightless I homolog (Drosophila)"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=TAS] [GO:0030054 "cell junction" evidence=IEA] [GO:0051014
"actin filament severing" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 MGI:MGI:1342286 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0030036 eggNOG:COG4886 GO:GO:0006351 GO:GO:0005925
GO:GO:0051014 InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 EMBL:AL596215 CleanEx:MM_FLI1
GeneTree:ENSGT00660000095502 HOGENOM:HOG000016110 OMA:MEEWNED
CTD:2314 HOVERGEN:HBG051627 OrthoDB:EOG4TB49G ChiTaRS:FLII
EMBL:AF142329 EMBL:AF287264 EMBL:BC027744 EMBL:BC032282
IPI:IPI00467104 RefSeq:NP_071292.1 UniGene:Mm.339755
ProteinModelPortal:Q9JJ28 SMR:Q9JJ28 DIP:DIP-47641N
MINT:MINT-4095146 STRING:Q9JJ28 PhosphoSite:Q9JJ28 PaxDb:Q9JJ28
PRIDE:Q9JJ28 Ensembl:ENSMUST00000002889 GeneID:14248 KEGG:mmu:14248
UCSC:uc007jgh.1 InParanoid:Q9JJ28 NextBio:285565 Bgee:Q9JJ28
CleanEx:MM_FLII Genevestigator:Q9JJ28 GermOnline:ENSMUSG00000002812
Uniprot:Q9JJ28
Length = 1271
Score = 232 (86.7 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 88/283 (31%), Positives = 134/283 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+T L WL LN L L +L L KL+ L + N L L ++ L ++ A N +
Sbjct: 32 MTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNHLTTLHGELSSLPSLRAIVARANSL 91
Query: 62 TSL---DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+ D + + L L V ++ NQ+T R E +N N+ ++L +N I S+ N
Sbjct: 92 KNSGVPDDIFK-LDDLSVLDLSHNQLTECPR-ELENAKNMLVLNLSHNGIDSIPNQLFIN 149
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
LT L YL LS N+L E L +R L L+T+ L+ N + R Q+ + + L
Sbjct: 150 LTDLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLR-----QLPAMMALQTL 203
Query: 178 KLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L++ + NL +L G+ LS +DLS N L + P+ L SL+ L++S N + L
Sbjct: 204 HLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRV-PECLYTLPSLRRLNLSSNQIAELS 262
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
++ LE L +S N LT L L L K L N +
Sbjct: 263 LCIDQWVH-LETLNLSRNQLTSLPSAICKLTKLKKLYLNSNKL 304
Score = 230 (86.0 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 74/269 (27%), Positives = 133/269 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--ALPSDIQLFSQLGSLYANNN 59
L L L +++N L +L G+L +L L+ +V N L+ +P DI L L ++N
Sbjct: 55 LQKLEHLSVSHNHLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHN 114
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++T L + V N+ N I + F NL +L + L N++ S+ + L
Sbjct: 115 QLTECPRELENAKNMLVLNLSHNGIDSIPNQLFINLTDLLYLDLSENRLESLPPQMRRLV 174
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ N L L + + L+T+ L N T++ ++G++N+ ++ L
Sbjct: 175 HLQTLVLNGNPLLHAQLRQLPAMMALQTLHLR----NTQRTQSNLPTSLEGLSNLSDVDL 230
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISP--DDFIGLDSLKMLDISHNLLTTLEET 237
N++ + L + L RL+LS N++ +S D ++ L++L ++S N LT+L +
Sbjct: 231 SCNDLTRVPECLYTLPSLRRLNLSSNQIAELSLCIDQWVHLETL---NLSRNQLTSLP-S 286
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLP 266
+ L L++L+++ N L DF GLP
Sbjct: 287 AICKLTKLKKLYLNSNKL-----DFDGLP 310
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 63/246 (25%), Positives = 115/246 (46%)
Query: 42 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
P +++ + L L N + L L L KL+ ++ N +T + E +L +L +I
Sbjct: 26 PENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNHLTTLH-GELSSLPSLRAI 84
Query: 102 SLQNNQI--TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ N + + + + L L+ L LSHNQLTE ++ K + ++LS+N I+
Sbjct: 85 VARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTE-CPRELENAKNMLVLNLSHNGIDSI- 142
Query: 160 TRNEGKNQVQ-GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
NQ+ +T++ L L N +E+L + + L L L+ N L +
Sbjct: 143 -----PNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAM 197
Query: 219 DSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+L+ L + + T TS L L ++ +S N LTR+ + + LP L + +L+ N
Sbjct: 198 MALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVPECLYTLPSLRRLNLSSNQ 257
Query: 278 IKAINI 283
I +++
Sbjct: 258 IAELSL 263
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 74/314 (23%), Positives = 132/314 (42%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L L + N LK+ + + L L +L + NQL P +++ + L ++N
Sbjct: 78 LPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTECPRELENAKNMLVLNLSHN 137
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I S+ L LT L ++ N++ + + + L +L ++ L N + L
Sbjct: 138 GIDSIPNQLFINLTDLLYLDLSENRLESLP-PQMRRLVHLQTLVLNGNPLLHAQLRQLPA 196
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+ L L+L + Q T+ L + GL L VDLS N + + + + ++
Sbjct: 197 MMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRV------PECLYTLPSLRR 250
Query: 177 LKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I L + +H L L+LS N+L ++ P L LK L ++ N L
Sbjct: 251 LNLSSNQIAELSLCIDQWVH-LETLNLSRNQLTSL-PSAICKLTKLKKLYLNSNKLDFDG 308
Query: 236 ETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
S L +LEE ++N+L + + P L K L N + + + T+ Q+
Sbjct: 309 LPSGIGKLTSLEEFMAANNNLELIPESLCRCPKLKKLVLNKNRLVTLPEAIHFLTEIQVL 368
Query: 295 GLNSTLRIYLEGNP 308
+ + + P
Sbjct: 369 DVRENPSLVMPPKP 382
>WB|WBGene00004929 [details] [associations]
symbol:soc-2 species:6239 "Caenorhabditis elegans"
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=IGI]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0031344
"regulation of cell projection organization" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068919 GO:GO:0008543 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0007517 InterPro:IPR025875 Pfam:PF12799
GO:GO:0040025 GO:GO:0046579 GO:GO:0031344 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AF054827 EMBL:FO080091 PIR:B88684
PIR:T30947 PIR:T42998 RefSeq:NP_001021259.1 RefSeq:NP_741391.2
UniGene:Cel.18171 ProteinModelPortal:Q22875 SMR:Q22875
IntAct:Q22875 MINT:MINT-115544 STRING:Q22875 PaxDb:Q22875
PRIDE:Q22875 EnsemblMetazoa:AC7.2a.1 EnsemblMetazoa:AC7.2a.2
GeneID:177286 KEGG:cel:CELE_AC7.2 UCSC:AC7.2b CTD:177286
WormBase:AC7.2a WormBase:AC7.2b InParanoid:Q22875 NextBio:896124
Uniprot:Q22875
Length = 559
Score = 227 (85.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 78/332 (23%), Positives = 155/332 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L LFL N+L L ++G L L+ L + +N L +LP + L +L +N++
Sbjct: 95 LTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKL 154
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T + ++ + L+ + +N+I V ++ NL L + ++ N+I + S++ LT L
Sbjct: 155 TEVPSVIYKIGSLETLWLRYNRIVAVD-EQIGNLSKLKMLDVRENKIRELPSAIGKLTSL 213
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+S+N LT + ++I L +DL +N +++ + GK + N+ + +++
Sbjct: 214 VVCLVSYNHLTR-VPEEIGDCHSLTQLDLQHNDLSEL-PYSIGK-----LVNLVRIGIRY 266
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N+I + L L + N L+ + P+ L + +++S N LT
Sbjct: 267 NKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQ 326
Query: 242 LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN-ST 299
+ + + HN ++++ F L K +L N + +++ L + + I LN ST
Sbjct: 327 FVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENEL--VSLPLDMGSWTSITELNLST 384
Query: 300 LRIYLEGNPVLCDDSMRAV-IDAMETINNNTK 330
++ VL +D + V ++ + NN K
Sbjct: 385 NQL-----KVLPEDIEKLVNLEILVLSNNQLK 411
Score = 216 (81.1 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 77/300 (25%), Positives = 140/300 (46%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L L +N L L +G L L + I N++ +PS+++ QL +N + L
Sbjct: 236 LTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLL 295
Query: 65 D-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLA 122
LL L K+ N+ N++T Q + +I++++NQI+ + + S T+L
Sbjct: 296 PPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLT 355
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L N+L LD + + ++LS N++ ++ + N+ L L +N
Sbjct: 356 KLNLKENELVSLPLD-MGSWTSITELNLSTNQLKVL------PEDIEKLVNLEILVLSNN 408
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+++ L + ++ L LDL N+L T+ P + L L L + N + TL + L
Sbjct: 409 QLKKLPNQIGNLNKLRELDLEENELETV-PTEIGFLQHLTKLWVQSNKILTLPRSIGN-L 466
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN-IKAINIQLALKTQCQIFGL-NSTL 300
+L++L + N+LT + ++ L L L N+ + + +LAL +I + NS L
Sbjct: 467 CSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPL 526
Score = 209 (78.6 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 64/249 (25%), Positives = 123/249 (49%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L++ + S+ + L++L L + +N+L LP++I L L + N +TSL
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDS 137
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L L+ ++ N++T V ++ + +L+++ L+ N+I +++ + L+KL L +
Sbjct: 138 LASLESLETLDLRHNKLTEVPSVIYK-IGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVR 196
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ E L I L L +SYN + + ++ ++ +L LQHN++ L
Sbjct: 197 ENKIRE-LPSAIGKLTSLVVCLVSYNHLTRV------PEEIGDCHSLTQLDLQHNDLSEL 249
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
++ + L R+ + +NK+R I P + L+ + N L L T LP +
Sbjct: 250 PYSIGKLVNLVRIGIRYNKIRCI-PSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHT 308
Query: 248 LFVSHNSLT 256
+ +S N LT
Sbjct: 309 VNLSRNELT 317
Score = 191 (72.3 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 62/253 (24%), Positives = 124/253 (49%)
Query: 29 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 88
Q L + ++ ++PS I+ +QL L+ N++T L + L L+ + N +T +
Sbjct: 76 QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135
Query: 89 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 148
D +L +L+++ L++N++T + S + + L L+L +N++ + + I L +L+ +
Sbjct: 136 -DSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVA-VDEQIGNLSKLKML 193
Query: 149 DLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLR 208
D+ NKI + + GK +T++ + +N + + + H L++LDL HN L
Sbjct: 194 DVRENKIRELPSAI-GK-----LTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLS 247
Query: 209 TISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHG-LPV 267
+ P L +L + I +N + + ++ LEE V N L L + LP
Sbjct: 248 EL-PYSIGKLVNLVRIGIRYNKIRCIPSELES-CQQLEEFIVESNHLQLLPPNLLTMLPK 305
Query: 268 LCKADLAHNNIKA 280
+ +L+ N + A
Sbjct: 306 IHTVNLSRNELTA 318
Score = 164 (62.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 40/133 (30%), Positives = 75/133 (56%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L+NN+LK L Q+G L+KL+ L +E+N+LE +P++I L L+ +N+I
Sbjct: 397 LVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKI 456
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ-ITSMNSSLSGLTK 120
+L + L LQ + N +T + +E +L +L S+ L +N + ++ L+
Sbjct: 457 LTLPRSIGNLCSLQDLRLGENNLTAIP-EEIGHLDSLKSLYLNDNSSLHNLPFELALCQS 515
Query: 121 LAYLYLSHNQLTE 133
L + + ++ L++
Sbjct: 516 LEIMSIENSPLSQ 528
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 46/151 (30%), Positives = 78/151 (51%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
T L L L N L SL +G+ + + L + NQL+ LP DI+ L L +NN++
Sbjct: 352 TRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLK 411
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
L + L KL+ +++ N++ V E L +L + +Q+N+I ++ S+ L L
Sbjct: 412 KLPNQIGNLNKLRELDLEENELETVPT-EIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQ 470
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 153
L L N LT + ++I L L+++ L+ N
Sbjct: 471 DLRLGENNLTA-IPEEIGHLDSLKSLYLNDN 500
>UNIPROTKB|Q22875 [details] [associations]
symbol:soc-2 "Leucine-rich repeat protein soc-2"
species:6239 "Caenorhabditis elegans" [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IMP]
[GO:0040025 "vulval development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 EMBL:AF068919
GO:GO:0008543 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007517 InterPro:IPR025875 Pfam:PF12799 GO:GO:0040025
GO:GO:0046579 GO:GO:0031344 HSSP:P07359 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AF054827 EMBL:FO080091 PIR:B88684 PIR:T30947 PIR:T42998
RefSeq:NP_001021259.1 RefSeq:NP_741391.2 UniGene:Cel.18171
ProteinModelPortal:Q22875 SMR:Q22875 IntAct:Q22875 MINT:MINT-115544
STRING:Q22875 PaxDb:Q22875 PRIDE:Q22875 EnsemblMetazoa:AC7.2a.1
EnsemblMetazoa:AC7.2a.2 GeneID:177286 KEGG:cel:CELE_AC7.2
UCSC:AC7.2b CTD:177286 WormBase:AC7.2a WormBase:AC7.2b
InParanoid:Q22875 NextBio:896124 Uniprot:Q22875
Length = 559
Score = 227 (85.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 78/332 (23%), Positives = 155/332 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L LFL N+L L ++G L L+ L + +N L +LP + L +L +N++
Sbjct: 95 LTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKL 154
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T + ++ + L+ + +N+I V ++ NL L + ++ N+I + S++ LT L
Sbjct: 155 TEVPSVIYKIGSLETLWLRYNRIVAVD-EQIGNLSKLKMLDVRENKIRELPSAIGKLTSL 213
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+S+N LT + ++I L +DL +N +++ + GK + N+ + +++
Sbjct: 214 VVCLVSYNHLTR-VPEEIGDCHSLTQLDLQHNDLSEL-PYSIGK-----LVNLVRIGIRY 266
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N+I + L L + N L+ + P+ L + +++S N LT
Sbjct: 267 NKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQ 326
Query: 242 LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN-ST 299
+ + + HN ++++ F L K +L N + +++ L + + I LN ST
Sbjct: 327 FVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENEL--VSLPLDMGSWTSITELNLST 384
Query: 300 LRIYLEGNPVLCDDSMRAV-IDAMETINNNTK 330
++ VL +D + V ++ + NN K
Sbjct: 385 NQL-----KVLPEDIEKLVNLEILVLSNNQLK 411
Score = 216 (81.1 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 77/300 (25%), Positives = 140/300 (46%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L L +N L L +G L L + I N++ +PS+++ QL +N + L
Sbjct: 236 LTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLL 295
Query: 65 D-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLA 122
LL L K+ N+ N++T Q + +I++++NQI+ + + S T+L
Sbjct: 296 PPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLT 355
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L N+L LD + + ++LS N++ ++ + N+ L L +N
Sbjct: 356 KLNLKENELVSLPLD-MGSWTSITELNLSTNQLKVL------PEDIEKLVNLEILVLSNN 408
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+++ L + ++ L LDL N+L T+ P + L L L + N + TL + L
Sbjct: 409 QLKKLPNQIGNLNKLRELDLEENELETV-PTEIGFLQHLTKLWVQSNKILTLPRSIGN-L 466
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN-IKAINIQLALKTQCQIFGL-NSTL 300
+L++L + N+LT + ++ L L L N+ + + +LAL +I + NS L
Sbjct: 467 CSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPL 526
Score = 209 (78.6 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 64/249 (25%), Positives = 123/249 (49%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L L++ + S+ + L++L L + +N+L LP++I L L + N +TSL
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDS 137
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L L L+ ++ N++T V ++ + +L+++ L+ N+I +++ + L+KL L +
Sbjct: 138 LASLESLETLDLRHNKLTEVPSVIYK-IGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVR 196
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
N++ E L I L L +SYN + + ++ ++ +L LQHN++ L
Sbjct: 197 ENKIRE-LPSAIGKLTSLVVCLVSYNHLTRV------PEEIGDCHSLTQLDLQHNDLSEL 249
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
++ + L R+ + +NK+R I P + L+ + N L L T LP +
Sbjct: 250 PYSIGKLVNLVRIGIRYNKIRCI-PSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHT 308
Query: 248 LFVSHNSLT 256
+ +S N LT
Sbjct: 309 VNLSRNELT 317
Score = 191 (72.3 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 62/253 (24%), Positives = 124/253 (49%)
Query: 29 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 88
Q L + ++ ++PS I+ +QL L+ N++T L + L L+ + N +T +
Sbjct: 76 QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135
Query: 89 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 148
D +L +L+++ L++N++T + S + + L L+L +N++ + + I L +L+ +
Sbjct: 136 -DSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVA-VDEQIGNLSKLKML 193
Query: 149 DLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLR 208
D+ NKI + + GK +T++ + +N + + + H L++LDL HN L
Sbjct: 194 DVRENKIRELPSAI-GK-----LTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLS 247
Query: 209 TISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHG-LPV 267
+ P L +L + I +N + + ++ LEE V N L L + LP
Sbjct: 248 EL-PYSIGKLVNLVRIGIRYNKIRCIPSELES-CQQLEEFIVESNHLQLLPPNLLTMLPK 305
Query: 268 LCKADLAHNNIKA 280
+ +L+ N + A
Sbjct: 306 IHTVNLSRNELTA 318
Score = 164 (62.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 40/133 (30%), Positives = 75/133 (56%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L+NN+LK L Q+G L+KL+ L +E+N+LE +P++I L L+ +N+I
Sbjct: 397 LVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKI 456
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ-ITSMNSSLSGLTK 120
+L + L LQ + N +T + +E +L +L S+ L +N + ++ L+
Sbjct: 457 LTLPRSIGNLCSLQDLRLGENNLTAIP-EEIGHLDSLKSLYLNDNSSLHNLPFELALCQS 515
Query: 121 LAYLYLSHNQLTE 133
L + + ++ L++
Sbjct: 516 LEIMSIENSPLSQ 528
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 46/151 (30%), Positives = 78/151 (51%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
T L L L N L SL +G+ + + L + NQL+ LP DI+ L L +NN++
Sbjct: 352 TRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLK 411
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
L + L KL+ +++ N++ V E L +L + +Q+N+I ++ S+ L L
Sbjct: 412 KLPNQIGNLNKLRELDLEENELETVPT-EIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQ 470
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 153
L L N LT + ++I L L+++ L+ N
Sbjct: 471 DLRLGENNLTA-IPEEIGHLDSLKSLYLNDN 500
>TAIR|locus:2183144 [details] [associations]
symbol:AT5G19680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000211189
HSSP:Q9XHH2 EMBL:BT003139 EMBL:AK228123 IPI:IPI00542629
RefSeq:NP_197469.1 UniGene:At.23794 ProteinModelPortal:Q84WJ9
SMR:Q84WJ9 IntAct:Q84WJ9 PaxDb:Q84WJ9 PRIDE:Q84WJ9
EnsemblPlants:AT5G19680.1 GeneID:832088 KEGG:ath:AT5G19680
TAIR:At5g19680 InParanoid:Q84WJ9 OMA:ANIQKVQ PhylomeDB:Q84WJ9
ProtClustDB:CLSN2687164 Genevestigator:Q84WJ9 Uniprot:Q84WJ9
Length = 328
Score = 219 (82.2 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 66/224 (29%), Positives = 121/224 (54%)
Query: 25 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 84
LS L+ LV+ N+L +P D+ +F++L + N ITSL+G+ + + L+ + N++
Sbjct: 86 LSDLEELVLRDNKLAKVP-DVSIFTKLLVYDISFNEITSLEGISKASSTLKELYVSKNEV 144
Query: 85 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 144
+ E ++LHNL + L +N++ M + L TKL L+L N++ + ++ GLK
Sbjct: 145 NKIM--EIEHLHNLQILELGSNRLRVMEN-LENFTKLEELWLGRNRIK---VVNLCGLKC 198
Query: 145 LRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSH 204
++ + L N++ T +G + + EL L HN I ++G L + L LD+S+
Sbjct: 199 IKKISLQSNRL----TSMKGFEECVALE---ELYLSHNGISKMEG-LSALVNLRVLDVSN 250
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
NKL ++ DD L L+ L ++ N + +LE ++ + E+L
Sbjct: 251 NKLTSV--DDIQNLTKLEDLWLNDNQIESLEAITEAVTGSKEKL 292
Score = 168 (64.2 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 65/256 (25%), Positives = 125/256 (48%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--AL-P-SDIQLFSQLGSLYANNNRITS 63
L L NRL L+ ++ LS L+ L + QN ++ A+ P S S L L +N++
Sbjct: 42 LDLTANRLSGLDSRIAQLSTLKKLSLRQNLIDDSAVEPLSHWDALSDLEELVLRDNKLAK 101
Query: 64 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 123
+ + TKL V+++ FN+IT + + L + + N++ + + L L
Sbjct: 102 VPDVSI-FTKLLVYDISFNEITSLEGISKAS-STLKELYVSKNEVNKI-MEIEHLHNLQI 158
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L N+L +++++ +L + L N+I + G+ I ++ LQ N
Sbjct: 159 LELGSNRLR--VMENLENFTKLEELWLGRNRIKVVN--------LCGLKCIKKISLQSNR 208
Query: 184 IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
+ ++ G + L L LSHN + + + L +L++LD+S+N LT++++ L
Sbjct: 209 LTSMKGFEECV-ALEELYLSHNGISKM--EGLSALVNLRVLDVSNNKLTSVDDIQN--LT 263
Query: 244 ALEELFVSHNSLTRLD 259
LE+L+++ N + L+
Sbjct: 264 KLEDLWLNDNQIESLE 279
Score = 159 (61.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 63/266 (23%), Positives = 133/266 (50%)
Query: 30 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI---TM 86
+L + QL +L + ++L L L NR++ LD + L+ L+ ++ N I +
Sbjct: 19 VLDLTSYQLHSLDT-VELPPNLIELDLTANRLSGLDSRIAQLSTLKKLSLRQNLIDDSAV 77
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRL 145
+ L +L+ + L++N++ + +S TKL +S N++T L+ I + L
Sbjct: 78 EPLSHWDALSDLEELVLRDNKLAKV-PDVSIFTKLLVYDISFNEITS--LEGISKASSTL 134
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+ + +S N++NK +++ + N+ L+L N + ++ L L L L N
Sbjct: 135 KELYVSKNEVNKI-------MEIEHLHNLQILELGSNRLRVMEN-LENFTKLEELWLGRN 186
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGL 265
+++ ++ GL +K + + N LT+++ + ALEEL++SHN +++++ L
Sbjct: 187 RIKVVN---LCGLKCIKKISLQSNRLTSMKGFEECV--ALEELYLSHNGISKME-GLSAL 240
Query: 266 PVLCKADLAHNNIKAIN-IQLALKTQ 290
L D+++N + +++ IQ K +
Sbjct: 241 VNLRVLDVSNNKLTSVDDIQNLTKLE 266
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 40/131 (30%), Positives = 72/131 (54%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
T L L+L NR+K + L L ++ + ++ N+L ++ + + L LY ++N I+
Sbjct: 176 TKLEELWLGRNRIKVVN--LCGLKCIKKISLQSNRLTSMKGFEECVA-LEELYLSHNGIS 232
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT--- 119
++GL L L+V ++ N++T V D+ QNL L+ + L +NQI S+ + +T
Sbjct: 233 KMEGL-SALVNLRVLDVSNNKLTSV--DDIQNLTKLEDLWLNDNQIESLEAITEAVTGSK 289
Query: 120 -KLAYLYLSHN 129
KL +YL +N
Sbjct: 290 EKLTTIYLENN 300
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 228 (85.3 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 76/283 (26%), Positives = 137/283 (48%)
Query: 8 LFLNNNRLKSLEGQL--GTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSL 64
L L+NNR++ + G + +Q L + +N L+ +P S + L L N+I ++
Sbjct: 88 LILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCNKIENI 147
Query: 65 DG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISLQNNQITSMNS-SLSGLTKL 121
+T L N+ NQI + D F N+ +L ++ L NN +T S ++ + L
Sbjct: 148 TTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKAVRNMNNL 207
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L++ +N++ +D L L + L+ N I++ +G +Q N+ L L
Sbjct: 208 IALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEI----KG-GALQNTPNLHYLYLNE 262
Query: 182 NEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N ++ LD G L L LDLS N I+ + F GL+S++ L++ N ++ + +
Sbjct: 263 NNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAFA 322
Query: 241 FLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
P L L++ +N LT + + G P L L++NNI+ ++
Sbjct: 323 GTPLLL-LWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREVH 364
Score = 218 (81.8 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 74/271 (27%), Positives = 130/271 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYAN 57
GL LN L L N+++++ + ++ L + + NQ+ ++ +D + L +L +
Sbjct: 130 GLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILD 189
Query: 58 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SL 115
NN +T +R + L ++ +N+I +R+++F NL +L +SL N I+ + +L
Sbjct: 190 NNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGAL 249
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L YLYL+ N L + K+L+ +DLS+N K +G+ +I
Sbjct: 250 QNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDIT-----KEMFEGLESIQ 304
Query: 176 ELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L L N I + GA G L L L +N L +S G L+M+ +S+N + +
Sbjct: 305 HLNLDSNRISAVAPGAFAGTP-LLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREV 363
Query: 235 EETSKTFLPALEELFVSHNSLTRL-DKDFHG 264
E S LP L L +++N + L +K G
Sbjct: 364 HELSFDHLPNLHTLDLANNKIMSLQNKSLSG 394
Score = 197 (74.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 84/340 (24%), Positives = 162/340 (47%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN---NRITS 63
L L+ N LK + L L L +L ++ N++E + + + F + SL N N+I S
Sbjct: 113 LSLSENNLKEVPTSALAGLRVLNILSLKCNKIENITT--KAFVNMTSLIDVNLGCNQICS 170
Query: 64 L--DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTK 120
+ D LQ +D N +T +N++NL ++ ++ N+I ++ + LT
Sbjct: 171 MAADTFANVKMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTS 230
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L+ L L+ N ++E I+G T +L Y +N+ + ++ + L L
Sbjct: 231 LSMLSLNGNNISE-----IKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLS 285
Query: 181 HNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N ++ + G+ + L+L N++ ++P F G L +L + +N LT + + +
Sbjct: 286 FNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAFAGTPLL-LLWLPNNCLTEVSQQTL 344
Query: 240 TFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNS 298
P L + +S+N++ + + F LP L DLA+N I ++L+ + + G +
Sbjct: 345 KGAPFLRMVSLSNNNIREVHELSFDHLPNLHTLDLANNKI------MSLQNK-SLSGPEN 397
Query: 299 TLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQ 338
L + L+ NPV+C + V+++ E I + + TIC+
Sbjct: 398 -LAVRLQENPVVCVKNGFHVLNSGEAIWLTNEAN--TICK 434
Score = 182 (69.1 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 54/201 (26%), Positives = 99/201 (49%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
+ +L L + N++ ++ + L+ L +L + N + + +Q L LY N N
Sbjct: 204 MNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNEN 263
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+ +LD G+L +LQV ++ FN T + ++ F+ L ++ ++L +N+I+++
Sbjct: 264 NLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAFAG 323
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T L L+L +N LTE ++G LR V LS N I R + + N+ L
Sbjct: 324 TPLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNI-----REVHELSFDHLPNLHTLD 378
Query: 179 LQHNEIENLDG-ALMGIHGLS 198
L +N+I +L +L G L+
Sbjct: 379 LANNKIMSLQNKSLSGPENLA 399
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 61/235 (25%), Positives = 104/235 (44%)
Query: 82 NQITMVRRDEFQNLHN-LDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDI 139
N+I + F L N + +SL N + + S+L+GL L L L N++
Sbjct: 93 NRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCNKIENITTKAF 152
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLS 198
+ L V+L N+I + N + N+ L +N + A+ ++ L
Sbjct: 153 VNMTSLIDVNLGCNQICSMAA-DTFANVKMSLQNLI---LDNNCMTEFPSKAVRNMNNLI 208
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
L + +NK+ I +DF+ L SL ML ++ N ++ ++ + P L L+++ N+L L
Sbjct: 209 ALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNENNLQTL 268
Query: 259 D----KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV 309
D + F L VL DL+ NN I T+ GL S + L+ N +
Sbjct: 269 DNGVLEQFKQLQVL---DLSFNNFTDI-------TKEMFEGLESIQHLNLDSNRI 313
>UNIPROTKB|F1PUU4 [details] [associations]
symbol:FLII "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 EMBL:AAEX03003715
Ensembl:ENSCAFT00000029049 Uniprot:F1PUU4
Length = 1273
Score = 231 (86.4 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 86/314 (27%), Positives = 151/314 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--ALPSDIQLFSQLGSLYANNN 59
L L L +++N L +L G+L +L L+ +V N L+ +P DI L L + N
Sbjct: 55 LQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYN 114
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++T L + V N+ N I + F NL +L + L N++ S+ + L
Sbjct: 115 QLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLESLPPQMRRLV 174
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ N L L + L L+T+ L N T++ ++G++N+ ++ L
Sbjct: 175 HLQTLVLNGNPLLHAQLRQLPALMALQTLHLR----NTQRTQSNLPTSLEGLSNLADVDL 230
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISP--DDFIGLDSLKMLDISHNLLTTLEET 237
N++ + L + L RL+LS N++ +S D ++ +++L ++S N LT+L +
Sbjct: 231 SCNDLTRVPECLYTLPSLRRLNLSSNQISELSLCIDQWVHVETL---NLSRNQLTSLP-S 286
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPV-LCK-ADL-----AHNNIKAINIQLALKTQ 290
+ L L++L+++ N L DF GLP + K A L A+NN++ I L T+
Sbjct: 287 AICKLTKLKKLYLNSNKL-----DFDGLPSGIGKLASLEEFMAANNNLELIPESLCRCTK 341
Query: 291 CQIFGLNSTLRIYL 304
+ LN + L
Sbjct: 342 LRKLVLNKNRLVTL 355
Score = 230 (86.0 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 85/283 (30%), Positives = 136/283 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+T L WL LN L L +L L KL+ L + N L L ++ L ++ A N +
Sbjct: 32 MTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSL 91
Query: 62 TSL---DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+ D + + L L V ++ +NQ+T R E +N N+ ++L +N I ++ N
Sbjct: 92 KNSGVPDDIFK-LDDLSVLDLSYNQLTECPR-ELENAKNMLVLNLSHNSIDTIPNQLFIN 149
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
LT L YL LS N+L E L +R L L+T+ L+ N + R Q+ + + L
Sbjct: 150 LTDLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLR-----QLPALMALQTL 203
Query: 178 KLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L++ + NL +L G+ L+ +DLS N L + P+ L SL+ L++S N ++ L
Sbjct: 204 HLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV-PECLYTLPSLRRLNLSSNQISELS 262
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
++ +E L +S N LT L L L K L N +
Sbjct: 263 LCIDQWVH-VETLNLSRNQLTSLPSAICKLTKLKKLYLNSNKL 304
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 81/320 (25%), Positives = 139/320 (43%)
Query: 25 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 84
++ L+ L + + L LP ++ +L L ++N +T+L G L L L+ N +
Sbjct: 32 MTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSL 91
Query: 85 --TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 142
+ V D F+ L +L + L NQ+T L + L LSHN + L
Sbjct: 92 KNSGVPDDIFK-LDDLSVLDLSYNQLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINL 150
Query: 143 KRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDL 202
L +DLS N++ Q++ + ++ L L N + L L + L L
Sbjct: 151 TDLLYLDLSENRLESLPP------QMRRLVHLQTLVLNGNPL--LHAQLRQLPALMALQT 202
Query: 203 SH--NKLRTIS--PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
H N RT S P GL +L +D+S N LT + E T LP+L L +S N ++ L
Sbjct: 203 LHLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYT-LPSLRRLNLSSNQISEL 261
Query: 259 DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAV 318
+ +L+ N + ++ + T+ + LNS ++ +G P A
Sbjct: 262 SLCIDQWVHVETLNLSRNQLTSLPSAICKLTKLKKLYLNSN-KLDFDGLP--SGIGKLAS 318
Query: 319 IDAMETINNNTKIHGETICQ 338
++ NNN ++ E++C+
Sbjct: 319 LEEFMAANNNLELIPESLCR 338
Score = 158 (60.7 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 63/246 (25%), Positives = 115/246 (46%)
Query: 42 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
P +++ + L L N + L L L KL+ ++ N +T + E +L +L +I
Sbjct: 26 PENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAI 84
Query: 102 SLQNNQI--TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ N + + + + L L+ L LS+NQLTE ++ K + ++LS+N I+
Sbjct: 85 VARANSLKNSGVPDDIFKLDDLSVLDLSYNQLTE-CPRELENAKNMLVLNLSHNSIDTI- 142
Query: 160 TRNEGKNQVQ-GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
NQ+ +T++ L L N +E+L + + L L L+ N L L
Sbjct: 143 -----PNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAL 197
Query: 219 DSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+L+ L + + T TS L L ++ +S N LTR+ + + LP L + +L+ N
Sbjct: 198 MALQTLHLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPSLRRLNLSSNQ 257
Query: 278 IKAINI 283
I +++
Sbjct: 258 ISELSL 263
Score = 141 (54.7 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 71/314 (22%), Positives = 131/314 (41%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L L + N LK+ + + L L +L + NQL P +++ + L ++N
Sbjct: 78 LPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYNQLTECPRELENAKNMLVLNLSHN 137
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I ++ L LT L ++ N++ + + + L +L ++ L N + L
Sbjct: 138 SIDTIPNQLFINLTDLLYLDLSENRLESLP-PQMRRLVHLQTLVLNGNPLLHAQLRQLPA 196
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L+L + Q T+ L + GL L VDLS N + + + + ++
Sbjct: 197 LMALQTLHLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV------PECLYTLPSLRR 250
Query: 177 LKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I L + +H + L+LS N+L ++ P L LK L ++ N L
Sbjct: 251 LNLSSNQISELSLCIDQWVH-VETLNLSRNQLTSL-PSAICKLTKLKKLYLNSNKLDFDG 308
Query: 236 ETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
S L +LEE ++N+L + + L K L N + + + T+ ++
Sbjct: 309 LPSGIGKLASLEEFMAANNNLELIPESLCRCTKLRKLVLNKNRLVTLPEAIHFLTEIEVL 368
Query: 295 GLNSTLRIYLEGNP 308
+ + + P
Sbjct: 369 DVRENPSLVMPPKP 382
>UNIPROTKB|J9P2Y3 [details] [associations]
symbol:FLII "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 OMA:MEEWNED CTD:2314 EMBL:AAEX03003715
RefSeq:XP_536659.4 Ensembl:ENSCAFT00000047161 GeneID:479521
KEGG:cfa:479521 Uniprot:J9P2Y3
Length = 1278
Score = 231 (86.4 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 86/314 (27%), Positives = 151/314 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE--ALPSDIQLFSQLGSLYANNN 59
L L L +++N L +L G+L +L L+ +V N L+ +P DI L L + N
Sbjct: 60 LQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYN 119
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++T L + V N+ N I + F NL +L + L N++ S+ + L
Sbjct: 120 QLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLESLPPQMRRLV 179
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ N L L + L L+T+ L N T++ ++G++N+ ++ L
Sbjct: 180 HLQTLVLNGNPLLHAQLRQLPALMALQTLHLR----NTQRTQSNLPTSLEGLSNLADVDL 235
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISP--DDFIGLDSLKMLDISHNLLTTLEET 237
N++ + L + L RL+LS N++ +S D ++ +++L ++S N LT+L +
Sbjct: 236 SCNDLTRVPECLYTLPSLRRLNLSSNQISELSLCIDQWVHVETL---NLSRNQLTSLP-S 291
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPV-LCK-ADL-----AHNNIKAINIQLALKTQ 290
+ L L++L+++ N L DF GLP + K A L A+NN++ I L T+
Sbjct: 292 AICKLTKLKKLYLNSNKL-----DFDGLPSGIGKLASLEEFMAANNNLELIPESLCRCTK 346
Query: 291 CQIFGLNSTLRIYL 304
+ LN + L
Sbjct: 347 LRKLVLNKNRLVTL 360
Score = 230 (86.0 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 85/283 (30%), Positives = 136/283 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+T L WL LN L L +L L KL+ L + N L L ++ L ++ A N +
Sbjct: 37 MTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSL 96
Query: 62 TSL---DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+ D + + L L V ++ +NQ+T R E +N N+ ++L +N I ++ N
Sbjct: 97 KNSGVPDDIFK-LDDLSVLDLSYNQLTECPR-ELENAKNMLVLNLSHNSIDTIPNQLFIN 154
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
LT L YL LS N+L E L +R L L+T+ L+ N + R Q+ + + L
Sbjct: 155 LTDLLYLDLSENRL-ESLPPQMRRLVHLQTLVLNGNPLLHAQLR-----QLPALMALQTL 208
Query: 178 KLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L++ + NL +L G+ L+ +DLS N L + P+ L SL+ L++S N ++ L
Sbjct: 209 HLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV-PECLYTLPSLRRLNLSSNQISELS 267
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
++ +E L +S N LT L L L K L N +
Sbjct: 268 LCIDQWVH-VETLNLSRNQLTSLPSAICKLTKLKKLYLNSNKL 309
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 81/320 (25%), Positives = 139/320 (43%)
Query: 25 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 84
++ L+ L + + L LP ++ +L L ++N +T+L G L L L+ N +
Sbjct: 37 MTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSL 96
Query: 85 --TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 142
+ V D F+ L +L + L NQ+T L + L LSHN + L
Sbjct: 97 KNSGVPDDIFK-LDDLSVLDLSYNQLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINL 155
Query: 143 KRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDL 202
L +DLS N++ Q++ + ++ L L N + L L + L L
Sbjct: 156 TDLLYLDLSENRLESLPP------QMRRLVHLQTLVLNGNPL--LHAQLRQLPALMALQT 207
Query: 203 SH--NKLRTIS--PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
H N RT S P GL +L +D+S N LT + E T LP+L L +S N ++ L
Sbjct: 208 LHLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYT-LPSLRRLNLSSNQISEL 266
Query: 259 DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAV 318
+ +L+ N + ++ + T+ + LNS ++ +G P A
Sbjct: 267 SLCIDQWVHVETLNLSRNQLTSLPSAICKLTKLKKLYLNSN-KLDFDGLP--SGIGKLAS 323
Query: 319 IDAMETINNNTKIHGETICQ 338
++ NNN ++ E++C+
Sbjct: 324 LEEFMAANNNLELIPESLCR 343
Score = 159 (61.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 65/257 (25%), Positives = 118/257 (45%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 90
L + Q P +++ + L L N + L L L KL+ ++ N +T +
Sbjct: 20 LTVTHPQGGYFPENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLH-G 78
Query: 91 EFQNLHNLDSISLQNNQI--TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 148
E +L +L +I + N + + + + L L+ L LS+NQLTE ++ K + +
Sbjct: 79 ELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYNQLTE-CPRELENAKNMLVL 137
Query: 149 DLSYNKINKFGTRNEGKNQVQ-GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+LS+N I+ NQ+ +T++ L L N +E+L + + L L L+ N L
Sbjct: 138 NLSHNSIDTI------PNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPL 191
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKDFHGLP 266
L +L+ L + + T TS L L ++ +S N LTR+ + + LP
Sbjct: 192 LHAQLRQLPALMALQTLHLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLP 251
Query: 267 VLCKADLAHNNIKAINI 283
L + +L+ N I +++
Sbjct: 252 SLRRLNLSSNQISELSL 268
Score = 141 (54.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 71/314 (22%), Positives = 131/314 (41%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L L + N LK+ + + L L +L + NQL P +++ + L ++N
Sbjct: 83 LPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYNQLTECPRELENAKNMLVLNLSHN 142
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I ++ L LT L ++ N++ + + + L +L ++ L N + L
Sbjct: 143 SIDTIPNQLFINLTDLLYLDLSENRLESLP-PQMRRLVHLQTLVLNGNPLLHAQLRQLPA 201
Query: 118 LTKLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L+L + Q T+ L + GL L VDLS N + + + + ++
Sbjct: 202 LMALQTLHLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRV------PECLYTLPSLRR 255
Query: 177 LKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I L + +H + L+LS N+L ++ P L LK L ++ N L
Sbjct: 256 LNLSSNQISELSLCIDQWVH-VETLNLSRNQLTSL-PSAICKLTKLKKLYLNSNKLDFDG 313
Query: 236 ETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
S L +LEE ++N+L + + L K L N + + + T+ ++
Sbjct: 314 LPSGIGKLASLEEFMAANNNLELIPESLCRCTKLRKLVLNKNRLVTLPEAIHFLTEIEVL 373
Query: 295 GLNSTLRIYLEGNP 308
+ + + P
Sbjct: 374 DVRENPSLVMPPKP 387
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 148 (57.2 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 40/124 (32%), Positives = 69/124 (55%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + I +NQ+ + +D Q L SL N+IT + G
Sbjct: 128 LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIPKG 187
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 125
L GL LQ+ ++ N+I +R + FQ+L NL+ +SL +N++ +++ L + L + L+
Sbjct: 188 LFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLH 247
Query: 126 LSHN 129
L+ N
Sbjct: 248 LAQN 251
Score = 137 (53.3 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 39/132 (29%), Positives = 69/132 (52%)
Query: 124 LYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L+ N+++ + + L LR ++LS NKI + EG G ++ EL L N
Sbjct: 353 LRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKEV---REGA--FDGAASVQELMLTGN 407
Query: 183 EIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
++E + G + G+ GL L L N + +S D F+GL S+++L + N ++T+ + T
Sbjct: 408 QLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTT 467
Query: 242 LPALEELFVSHN 253
L +L + + N
Sbjct: 468 LVSLSTINLLSN 479
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 77/324 (23%), Positives = 144/324 (44%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
L +L + L+NN++K + EG + +Q L++ NQLE + + + S L +L +N
Sbjct: 372 LPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSN 431
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
I+ + GL+ +++ ++ N+I+ + F L +L +I+L +N + N L+ L
Sbjct: 432 LISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSNPF-NCNCHLAWL 490
Query: 119 TKLAYL--YLSHNQLTE--FLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
K +S N + F L +I ++ + D + + N + G + T +
Sbjct: 491 GKWLRKRRIVSGNPRCQKPFFLKEIP-IQDVAIQDFTCEEGNDESSCQLGPRCPEQCTCV 549
Query: 175 FELKLQHNEIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+ N L GI ++ L L N L + P + L ++D+S+N +
Sbjct: 550 ETVVRCSNR--GLRALPRGIPKDVTELYLEGNHLTAV-PRELSIFRHLTLIDLSNNSIGM 606
Query: 234 LEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
L + + + L L +S+N L + F+GL L L N+I ++ +
Sbjct: 607 LTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDISSV-------PEGS 659
Query: 293 IFGLNSTLRIYLEGNPVLCDDSMR 316
L S + L NP+ CD S+R
Sbjct: 660 FNDLTSLSHLALGTNPLHCDCSLR 683
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 79/302 (26%), Positives = 130/302 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP----SDIQLFSQLGSLY 55
GL L L L N++ + +G L LQLL++ N++ L D+Q + L SLY
Sbjct: 167 GLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLL-SLY 225
Query: 56 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N + S GL L +Q ++ N D +L L LQ+N I + +
Sbjct: 226 DNKLQTIS-KGLFAPLQAIQTLHLAQNPFVC---D--CHLKWLADY-LQDNPIETSGARC 278
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRG--LKRLRTVD-----LSYNKINKFGTRNEGKNQ- 167
S +LA +S + +F + + L D L +K GT + NQ
Sbjct: 279 SSPRRLANKRISQIKSKKFRCSGNQDSQYRHLLVADVGSDFLCPDKCRCEGTIVDCSNQK 338
Query: 168 VQGVTN-----IFELKLQHNEIENLD--GALMGIHGLSRLDLSHNKLRTISPDDFIGLDS 220
+ V + + +L+L NEI L+ G + L +++LS+NK++ + F G S
Sbjct: 339 LARVPSHLPEYVTDLRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAAS 398
Query: 221 LKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIK 279
++ L ++ N L T+ L L+ L + N ++ + D F GL + L N I
Sbjct: 399 VQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRIS 458
Query: 280 AI 281
I
Sbjct: 459 TI 460
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 229 (85.7 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 72/236 (30%), Positives = 114/236 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L+ L L L+NN++K+L GQ L L+ L + N L P I+ L L ++N
Sbjct: 154 LSSLVVLHLHNNKIKNL-GQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSN 212
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
I+ + DG G L+ ++ N ++ V F NL +L S+ ++ + +L+G
Sbjct: 213 SISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGT 272
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L L+ +++ + + K LRT+DLSYN I + G + E+
Sbjct: 273 VHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLPS-------FDGCHALEEIS 325
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
LQ N+I + +G G+ L LDLS N++ I F L S+ LDIS N LT+
Sbjct: 326 LQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTS 381
Score = 203 (76.5 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 77/281 (27%), Positives = 134/281 (47%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L L L N L + + L L +L++L ++ NQL+ +PS+ I+ S L SL + N IT
Sbjct: 37 LEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 96
Query: 63 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
S+ + GL +L+ +D N + V NL L +++L N+I+S+ + + + L+
Sbjct: 97 SVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSS 156
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L+L +N++ GL L T+DL+YN + +F ++ + ++ EL
Sbjct: 157 LVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLGEF------PQAIKALPSLKELLFH 210
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N I + DGA G L + L N L + F L L L I + + +
Sbjct: 211 SNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ-QFPNL 269
Query: 240 TFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIK 279
T LE L ++ ++ + + +L DL++N+IK
Sbjct: 270 TGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIK 310
Score = 197 (74.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 63/227 (27%), Positives = 109/227 (48%)
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
N IT L + + L+ + N ++ + L L ++LQNNQ+ ++ S ++
Sbjct: 21 NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIR 80
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL+ L L L N +T D GL +LR + L N + + + + + +
Sbjct: 81 GLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPV-----HPLSNLPTLQA 135
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I ++ D A + L L L +NK++ + F GLD+L+ LD+++N L
Sbjct: 136 LTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLGEFP 195
Query: 236 ETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAI 281
+ K LP+L+EL NS++ + D F G P+L L N + +
Sbjct: 196 QAIKA-LPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFV 241
Score = 176 (67.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 62/212 (29%), Positives = 101/212 (47%)
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYL 126
L L L+ +M N IT + D F+N L+ + L N ++ ++ +LSGL +L L L
Sbjct: 9 LNSLPALRDISM--NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTL 66
Query: 127 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIEN 186
+NQL + IRGL L+++ L N I ++ +G+ + L L N +
Sbjct: 67 QNNQLKTVPSEAIRGLSALQSLRLDANHITSVP-----EDSFEGLAQLRHLWLDDNSLME 121
Query: 187 LD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPAL 245
+ L + L L L+ NK+ +I F L SL +L + +N + L + L L
Sbjct: 122 VPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNL 181
Query: 246 EELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
E L +++N+L + LP L K L H+N
Sbjct: 182 ETLDLNYNNLGEFPQAIKALPSL-KELLFHSN 212
Score = 175 (66.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 79/289 (27%), Positives = 130/289 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL +L L L NN+LK++ + + LS LQ L ++ N + ++P D + +QL L+ ++
Sbjct: 57 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDD 116
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LS 116
N + + L L LQ + N+I+ + F NL +L + L NN+I ++
Sbjct: 117 NSLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFD 176
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L++N L EF I+ L L+ + N I+ N + ++++
Sbjct: 177 GLDNLETLDLNYNNLGEFP-QAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYD 235
Query: 177 LKLQ---HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L ++ NL D + I G S + N T+ + + L K+ IS NL
Sbjct: 236 NPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLES-LTLTGTKISSISSNLC- 293
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+E L L +S+NS+ L F G L + L N I I
Sbjct: 294 --QEQKM-----LRTLDLSYNSIKDLPS-FDGCHALEEISLQRNQIHQI 334
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 75/289 (25%), Positives = 130/289 (44%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN- 58
GL+ L L L+ N + S+ E L++L+ L ++ N L +P + S L +L A
Sbjct: 81 GLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVP--VHPLSNLPTLQALTL 138
Query: 59 --NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N+I+S+ D L+ L V ++ N+I + + F L NL+++ L N + ++
Sbjct: 139 ALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLGEFPQAI 198
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN-I 174
L L L N ++ G LRT+ L N ++ G N + + + + +
Sbjct: 199 KALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVG--NSAFHNLSDLHSLV 256
Query: 175 FELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
+ NL G +H L L L+ K+ +IS + L+ LD+S+N + L
Sbjct: 257 IRGASMVQQFPNLTGT---VH-LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDL 312
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
ALEE+ + N + ++ + F GL L DL+ N I I+
Sbjct: 313 PSFDGCH--ALEEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIH 359
Score = 147 (56.8 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 59/231 (25%), Positives = 110/231 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
GL +L L LN N L + L L+ L+ N + +P L +++ +N
Sbjct: 177 GLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDN 236
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMNSSL 115
++ + + L+ L ++ +MV+ +F NL +L+S++L +I+S++S+L
Sbjct: 237 PLSFVGNSAFHNLSDLH--SLVIRGASMVQ--QFPNLTGTVHLESLTLTGTKISSISSNL 292
Query: 116 SGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
K L L LS+N + + L G L + L N+I++ EG QG+ ++
Sbjct: 293 CQEQKMLRTLDLSYNSIKD--LPSFDGCHALEEISLQRNQIHQI---KEGT--FQGLVSL 345
Query: 175 FELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
L L N+I + A + ++ LD+S N+L + + GL+ LK++
Sbjct: 346 RILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTSFPTEGLSGLNQLKLV 396
Score = 137 (53.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIE-QNQLEALPSDIQLFSQLGSLYANNNRIT 62
L + L +N L + LS L LVI + ++ P+ + L SL +I+
Sbjct: 228 LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPN-LTGTVHLESLTLTGTKIS 286
Query: 63 SLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK 120
S+ L + L+ ++ +N I + F H L+ ISLQ NQI + + GL
Sbjct: 287 SISSNLCQEQKMLRTLDLSYNSIKDL--PSFDGCHALEEISLQRNQIHQIKEGTFQGLVS 344
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQGVTNIFELK 178
L L LS NQ+ E L + +D+S+N++ F T G NQ++ V N+ +LK
Sbjct: 345 LRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTSFPTEGLSGLNQLKLVGNL-KLK 402
>UNIPROTKB|E1BRU5 [details] [associations]
symbol:E1BRU5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005178 "integrin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0030056
"hemidesmosome" evidence=IEA] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
GO:GO:0005634 GO:GO:0005737 GO:GO:0006605 GO:GO:0016323
SUPFAM:SSF50156 InterPro:IPR025875 Pfam:PF12799 GO:GO:0030056
GeneTree:ENSGT00650000093182 OMA:HNNVRAN EMBL:AADN02045981
EMBL:AADN02045982 EMBL:AADN02045983 EMBL:AADN02045984
EMBL:AADN02045985 EMBL:AADN02045986 EMBL:AADN02045987 EMBL:AC145935
IPI:IPI00819393 ProteinModelPortal:E1BRU5
Ensembl:ENSGALT00000038678 ArrayExpress:E1BRU5 Uniprot:E1BRU5
Length = 1403
Score = 231 (86.4 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 79/281 (28%), Positives = 131/281 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +N
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T + +L L+ L+ F MD N++T++ L L + + N I + +SG L
Sbjct: 197 TEVPEVLEQLSGLKEFWMDGNRLTLIP-GFIGTLKQLTYLDVSKNNIEIVEEGISGCESL 255
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L + L + I LK++ T+ + N++ + + G+ ++ EL
Sbjct: 256 QDLLLSSNSLQQ-LPETIGSLKKVTTLKIDENQLIYL------PDSIGGLVSVEELDCSF 308
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
NEIE L ++ + + HN L + P+ IG + +L + N L L E
Sbjct: 309 NEIETLPSSVGQLSNIRTFAADHNFLTQLPPE--IGNWKYITVLFLHSNKLEFLPEEMGD 366
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ L+ + +S N L L F L L L+ N K +
Sbjct: 367 -MQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPL 406
Score = 192 (72.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 74/277 (26%), Positives = 121/277 (43%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L V N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTVVEASVNPISKLP-DGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L NQL + L + L +L +DL N+ + E Q+ G+ E + N +
Sbjct: 167 ELRENQL-KILPKTMSRLTQLERLDLGSNEFTEVP---EVLEQLSGLK---EFWMDGNRL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ G + + L+ LD+S N + + + G +SL+ L +S N L L ET + L
Sbjct: 220 TLIPGFIGTLKQLTYLDVSKNNIEIVE-EGISGCESLQDLLLSSNSLQQLPETIGS-LKK 277
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ L + N L L GL + + D + N I+ +
Sbjct: 278 VTTLKIDENQLIYLPDSIGGLVSVEELDCSFNEIETL 314
Score = 190 (71.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 71/297 (23%), Positives = 131/297 (44%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L LTKLQ+ + NQ+ ++ + L L+ + L +N+ T + L L+ L
Sbjct: 151 EFLPANFGRLTKLQILELRENQLKILPKT-MSRLTQLERLDLGSNEFTEVPEVLEQLSGL 209
Query: 122 AYLYLSHNQLTEFLLDDIRG-LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
++ N+LT L+ G LK+L +D+S N I EG + G ++ +L L
Sbjct: 210 KEFWMDGNRLT--LIPGFIGTLKQLTYLDVSKNNIEIV---EEG---ISGCESLQDLLLS 261
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N ++ L + + ++ L + N+L + PD GL S++ LD S N + TL +S
Sbjct: 262 SNSLQQLPETIGSLKKVTTLKIDENQLIYL-PDSIGGLVSVEELDCSFNEIETLP-SSVG 319
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L + HN LT+L + + L N ++ + ++ + ++ L+
Sbjct: 320 QLSNIRTFAADHNFLTQLPPEIGNWKYITVLFLHSNKLEFLPEEMGDMQKLKVINLS 376
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 54/211 (25%), Positives = 97/211 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L+ L +++ NRL + G +GTL +L L + +N +E + I L L ++N +
Sbjct: 206 LSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEIVEEGISGCESLQDLLLSSNSL 265
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + L K+ +D NQ+ + D L +++ + N+I ++ SS+ L+ +
Sbjct: 266 QQLPETIGSLKKVTTLKIDENQLIYLP-DSIGGLVSVEELDCSFNEIETLPSSVGQLSNI 324
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
HN LT+ L +I K + + L NK+ +F G Q V N L
Sbjct: 325 RTFAADHNFLTQ-LPPEIGNWKYITVLFLHSNKL-EFLPEEMGDMQKLKVIN-----LSD 377
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISP 212
N ++NL + L+ + LS N+ + + P
Sbjct: 378 NRLKNLPFTFTKLQQLTAMWLSDNQSKPLIP 408
Score = 132 (51.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G L L L++N L+ L +G+L K+ L I++NQL LP I + L + N
Sbjct: 251 GCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDSIGGLVSVEELDCSFNE 310
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
I +L + L+ ++ F D N +T + E N + + L +N++ + + + K
Sbjct: 311 IETLPSSVGQLSNIRTFAADHNFLTQLP-PEIGNWKYITVLFLHSNKLEFLPEEMGDMQK 369
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L + LS N+L + L++L + LS N+
Sbjct: 370 LKVINLSDNRLKNLPFTFTK-LQQLTAMWLSDNQ 402
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 227 (85.0 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 73/264 (27%), Positives = 130/264 (49%)
Query: 19 EGQLGTLS-----KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLT 72
EGQL L +Q LVI+ N+++ + S IQ +++L L ++N + ++
Sbjct: 47 EGQLDVLPIALNPSIQRLVIKSNKIKTIDSSIQFYAELTFLDLSSNHLMTIPQRTFAYQK 106
Query: 73 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQL 131
KLQ +++ N+I + F L + ++L+ NQI+ ++ + + L K+ L L N++
Sbjct: 107 KLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRI 166
Query: 132 TEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-A 190
GL +LR + L N + T Q + ++ EL L N ++++ A
Sbjct: 167 GYLDPKAFDGLSQLRILYLDDNAL----TTVPDPVIFQAMPSLAELFLGMNTLQSIQADA 222
Query: 191 LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFV 250
+ GL+RL+L LR IS D F+GL L++LD+S N L + + L LE+L +
Sbjct: 223 FQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSL 282
Query: 251 SHNSLTRLDKD-FHGLPVLCKADL 273
N + + F GL L + ++
Sbjct: 283 GQNDFEVISEGAFMGLKQLKRLEV 306
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 81/342 (23%), Positives = 146/342 (42%)
Query: 4 DLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRI 61
+L +L L++N L ++ + KLQ + + N++ + + + S + L N+I
Sbjct: 83 ELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQI 142
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL--SGL 118
+ L G L K++ N+ N+I + F L L + L +N +T++ + +
Sbjct: 143 SELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAM 202
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
LA L+L N L D + LK L ++L + RN + G+ + L
Sbjct: 203 PSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASL-----RNISHDSFLGLQELRILD 257
Query: 179 LQHNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL-LTTLEE 236
L N ++ + L + L +L L N IS F+GL LK L+++ L L +
Sbjct: 258 LSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMT 317
Query: 237 TSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGL 296
+ + LE L +S N + L+ L L + L H +KA N +L +F
Sbjct: 318 GAFSDNGNLEYLNLSSNKML-LEVQEGALSGL--SQLKHVVLKA-NALTSLAEG--LFPW 371
Query: 297 NSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQ 338
+ L NP+ CD + + + + N + E +C+
Sbjct: 372 KDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVSELLCE 413
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 56/211 (26%), Positives = 104/211 (49%)
Query: 2 LTDLNWLFLNNNRLKSL--EGQLGTLSKLQLLVIEQNQLEALPS----DIQLFSQLGSLY 55
L L L L L+++ + LG L +L++L + N+L+ +PS + QL SL
Sbjct: 226 LKGLTRLELKGASLRNISHDSFLG-LQELRILDLSDNRLDRIPSVGLSKLVRLEQL-SLG 283
Query: 56 ANNNRITSLDGLLRGLTKLQVFNMDFN-QITMVRRDEFQNLHNLDSISLQNNQ--ITSMN 112
N+ + S +G GL +L+ ++ ++ V F + NL+ ++L +N+ +
Sbjct: 284 QNDFEVIS-EGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQE 342
Query: 113 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI----------NKFGTRN 162
+LSGL++L ++ L N LT L + + K L+T+DLS N + N +N
Sbjct: 343 GALSGLSQLKHVVLKANALTS-LAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKN 401
Query: 163 EGKNQVQGVTNIFELKLQHNEIENLDGALMG 193
++ V + F +L+ + +L+ A+MG
Sbjct: 402 ASQDDVSELLCEFPERLRGESLRHLNPAMMG 432
>ZFIN|ZDB-GENE-061103-403 [details] [associations]
symbol:erbb2ip "erbb2 interacting protein"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00595 InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 ZFIN:ZDB-GENE-061103-403
SUPFAM:SSF50156 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00650000093182 EMBL:BX640501 EMBL:CR854840
EMBL:CR925725 IPI:IPI00829181 Ensembl:ENSDART00000129441
Uniprot:E7EYJ7
Length = 1384
Score = 233 (87.1 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 79/276 (28%), Positives = 130/276 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L+ L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +N
Sbjct: 137 LLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T + +L LT ++ MD N++T V L L + + N + + +SG L
Sbjct: 197 TEVPEVLEQLTGIRELWMDGNKLTFVP-GMIGALKQLSYLDVSKNNVEMVEEQISGCENL 255
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS+N LT+ L I LK+L T+ + N++ + + G++++ EL
Sbjct: 256 QDLLLSNNALTQ-LPGSIGSLKKLSTLKVDDNQLMYL------PDTIGGLSHLDELDCSF 308
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKT 240
NEIE L ++ L HN L + P+ +G L ++ +L + N L L E
Sbjct: 309 NEIEALPSSIGQCVNLRTFAADHNLLAQMPPE--MGSLKNVTVLFLHSNKLENLPEEMGD 366
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
+ L+ + +S N L L F L + L+ N
Sbjct: 367 -MQKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSEN 401
Score = 216 (81.1 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 72/296 (24%), Positives = 130/296 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L LTKLQ+ + NQ+ M+ + L L+ + L +N+ T + L LT +
Sbjct: 151 EFLPASFGRLTKLQILELRENQLKMLPKS-MHKLTQLERLDLGSNEFTEVPEVLEQLTGI 209
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L++ N+LT F+ I LK+L +D+S N + + Q+ G N+ +L L +
Sbjct: 210 RELWMDGNKLT-FVPGMIGALKQLSYLDVSKNNVEMV------EEQISGCENLQDLLLSN 262
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N + L G++ + LS L + N+L + PD GL L LD S N + L +
Sbjct: 263 NALTQLPGSIGSLKKLSTLKVDDNQLMYL-PDTIGGLSHLDELDCSFNEIEALPSSIGQC 321
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
+ L HN L ++ + L + L N ++ + ++ + ++ L+
Sbjct: 322 VN-LRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVINLS 376
Score = 202 (76.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 78/296 (26%), Positives = 129/296 (43%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L L + N L LP I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQLLYRLSLPDNDLTVLPPGIANLINLRELDVSKNGIQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L + N I+ + + F L +L + L + + + +S LTKL L
Sbjct: 108 PENIKNCKVLAIVEASVNPISKLP-EGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L NQL + L + L +L +DL N+ E ++ +T I EL + N++
Sbjct: 167 ELRENQL-KMLPKSMHKLTQLERLDLGSNEFT------EVPEVLEQLTGIRELWMDGNKL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ G + + LS LD+S N + + + G ++L+ L +S+N LT L + + L
Sbjct: 220 TFVPGMIGALKQLSYLDVSKNNVEMVE-EQISGCENLQDLLLSNNALTQLPGSIGS-LKK 277
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTL 300
L L V N L L GL L + D + N I+A+ + + F + L
Sbjct: 278 LSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNL 333
Score = 162 (62.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 47/157 (29%), Positives = 76/157 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G +L L L+NN L L G +G+L KL L ++ NQL LP I S L L + N
Sbjct: 251 GCENLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNE 310
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
I +L + L+ F D N + + E +L N+ + L +N++ ++ + + K
Sbjct: 311 IEALPSSIGQCVNLRTFAADHNLLAQMP-PEMGSLKNVTVLFLHSNKLENLPEEMGDMQK 369
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 157
L + LS N+L L L ++ + LS N+ +K
Sbjct: 370 LKVINLSDNKLRN-LPYSFTKLNQMTAMWLSENQQSK 405
Score = 131 (51.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 64/238 (26%), Positives = 106/238 (44%)
Query: 68 LRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 125
LRG + V +D++ ++ V ++ F L+ + L NQI + L L L
Sbjct: 17 LRGEEET-VTTLDYSHCSLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQLLYRLS 75
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF--GTRN-------EGK-NQV----QGV 171
L N LT L I L LR +D+S N I +F +N E N + +G
Sbjct: 76 LPDNDLT-VLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGF 134
Query: 172 TNIFEL-KLQHNE--IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
T + L +L N+ +E L + + L L+L N+L+ + P L L+ LD+
Sbjct: 135 TQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKML-PKSMHKLTQLERLDLGS 193
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA 286
N T + E + L + EL++ N LT + L L D++ NN++ + Q++
Sbjct: 194 NEFTEVPEVLEQ-LTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQIS 250
Score = 126 (49.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 36/135 (26%), Positives = 72/135 (53%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L+ L +++N+L L +G LS L L N++EALPS I L + A++N +
Sbjct: 275 LKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLL 334
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ + L + V + N++ + +E ++ L I+L +N++ ++ S + L ++
Sbjct: 335 AQMPPEMGSLKNVTVLFLHSNKLENLP-EEMGDMQKLKVINLSDNKLRNLPYSFTKLNQM 393
Query: 122 AYLYLSHNQLTEFLL 136
++LS NQ ++ L+
Sbjct: 394 TAMWLSENQQSKPLI 408
Score = 41 (19.5 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 7/31 (22%), Positives = 19/31 (61%)
Query: 304 LEGNPVLCDDSMRAVIDAMETINNNTKIHGE 334
+E P+ D+MR +++ +T+ ++ ++ E
Sbjct: 572 IERIPLKTSDNMRTMVNHDDTLEDSEELSSE 602
Score = 38 (18.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKM--LDISHNLLTTLEETSKTFLPALEELFVSHNS 254
RL L + D + D + M +S + + EE +T P +E S+N+
Sbjct: 753 RLALIEKGINNGVTDQYSKWDQINMNVAKLSPDNMLAYEELERTKSPPAKETMSSNNN 810
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 71/236 (30%), Positives = 115/236 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L+ L L L+NN++KSL L L+ L + N L+ P I+ L L ++N
Sbjct: 200 LSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQAIKALPSLKELGFHSNS 259
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
I+ + DG G L+ ++ N ++ V F NL +L + ++ + +L+G
Sbjct: 260 ISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTV 319
Query: 120 KLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L L+ +++ + DD+ + K LRT+DLSYN I + N G + E+
Sbjct: 320 HLESLTLTGTKISS-IPDDLCQNQKMLRTLDLSYNNIRDLPSFN-------GCRALEEIS 371
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
LQ N+I + + G+ L LDLS N +R I F L ++ LD+S N LT+
Sbjct: 372 LQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS 427
Score = 223 (83.6 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 71/248 (28%), Positives = 121/248 (48%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P + F+Q + NN IT L + + L+ + N ++++ L
Sbjct: 48 LTAVPEGLSAFTQALDISMNN--ITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLK 105
Query: 97 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L ++LQNNQ+ ++ S ++ GL+ L L L N +T D GL +LR + L N +
Sbjct: 106 ELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL 165
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD 214
+ R + + + L L N I ++ D A + L L L +NK++++S
Sbjct: 166 TEVPVR-----PLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHC 220
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADL 273
F GLD+L+ LD+++N L + K LP+L+EL NS++ + D F G P+L L
Sbjct: 221 FDGLDNLETLDLNYNYLDEFPQAIKA-LPSLKELGFHSNSISVIPDGAFGGNPLLRTIHL 279
Query: 274 AHNNIKAI 281
N + +
Sbjct: 280 YDNPLSFV 287
Score = 214 (80.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 80/282 (28%), Positives = 134/282 (47%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L L L N L + + L L +L++L ++ NQL +PS+ I S L SL + N IT
Sbjct: 83 LEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHIT 142
Query: 63 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
S+ + GL +L+ +D N +T V NL L +++L N I+S+ + + + L+
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSS 202
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L+L +N++ GL L T+DL+YN +++F ++ + ++ EL
Sbjct: 203 LVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEF------PQAIKALPSLKELGFH 256
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI-SHNLLTTLEETS 238
N I + DGA G L + L N L + F L L L I +L+ +
Sbjct: 257 SNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLT 316
Query: 239 KTFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIK 279
T LE L ++ ++ + D +L DL++NNI+
Sbjct: 317 GTV--HLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIR 356
Score = 179 (68.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 78/289 (26%), Positives = 131/289 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL +L L L NN+L+++ + + LS LQ L ++ N + ++P D + QL L+ ++
Sbjct: 103 GLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LS 116
N +T + L L LQ + N I+ + F NL +L + L NN+I S++
Sbjct: 163 NSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFD 222
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L++N L EF I+ L L+ + N I+ G N + ++++
Sbjct: 223 GLDNLETLDLNYNYLDEFP-QAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYD 281
Query: 177 LKLQ---HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L ++ NL D + I G S + N T+ + + L K+ I +L
Sbjct: 282 NPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHLES-LTLTGTKISSIPDDLC- 339
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ K L L +S+N++ L F+G L + L N I I
Sbjct: 340 ---QNQKM----LRTLDLSYNNIRDLPS-FNGCRALEEISLQRNQISLI 380
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 77/289 (26%), Positives = 133/289 (46%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN- 58
GL+ L L L+ N + S+ E L +L+ L ++ N L +P ++ S L +L A
Sbjct: 127 GLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVP--VRPLSNLPTLQALTL 184
Query: 59 --NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N I+S+ D L+ L V ++ N+I + + F L NL+++ L N + ++
Sbjct: 185 ALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQAI 244
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L L L N ++ G LRT+ L N ++ F G + ++++
Sbjct: 245 KALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLS-F----VGNSAFHNLSDLH 299
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI-GLDSLKMLDISHNLLTTL 234
L ++ + L G L L L+ K+ +I PDD L+ LD+S+N + L
Sbjct: 300 CLVIRGASLVQWFPNLTGTVHLESLTLTGTKISSI-PDDLCQNQKMLRTLDLSYNNIRDL 358
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
S ALEE+ + N ++ + ++ F GL L DL+ N I+ I+
Sbjct: 359 P--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIH 405
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 56/189 (29%), Positives = 86/189 (45%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
L + L +N L + LS L LVI L ++ L SL +I+S
Sbjct: 274 LRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHLESLTLTGTKISS 333
Query: 64 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKL 121
+ D L + L+ ++ +N I + F L+ ISLQ NQI+ + ++ GLT L
Sbjct: 334 IPDDLCQNQKMLRTLDLSYNNIRDL--PSFNGCRALEEISLQRNQISLIKENTFQGLTSL 391
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQGVTNIFELK-- 178
L LS N + E L + +D+S+N++ F T G NQ++ V N F+LK
Sbjct: 392 RILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLVGN-FKLKDA 450
Query: 179 LQHNEIENL 187
L + NL
Sbjct: 451 LAARDFANL 459
Score = 129 (50.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 58/231 (25%), Positives = 106/231 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL-GSLYANNN 59
GL +L L LN N L + L L+ L N + +P + L +++ +N
Sbjct: 223 GLDNLETLDLNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDN 282
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMNSSL 115
++ + + L+ L + ++V+ F NL +L+S++L +I+S+ L
Sbjct: 283 PLSFVGNSAFHNLSDLHC--LVIRGASLVQW--FPNLTGTVHLESLTLTGTKISSIPDDL 338
Query: 116 SGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
K L L LS+N + + L G + L + L N+I+ +N QG+T++
Sbjct: 339 CQNQKMLRTLDLSYNNIRD--LPSFNGCRALEEISLQRNQISLIK-----ENTFQGLTSL 391
Query: 175 FELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
L L N I + GA + ++ LD+S N+L + + GL+ LK++
Sbjct: 392 RILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLV 442
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 71/236 (30%), Positives = 115/236 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L+ L L L+NN++KSL L L+ L + N L+ P I+ L L ++N
Sbjct: 200 LSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQAIKALPSLKELGFHSNS 259
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
I+ + DG G L+ ++ N ++ V F NL +L + ++ + +L+G
Sbjct: 260 ISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTV 319
Query: 120 KLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L L+ +++ + DD+ + K LRT+DLSYN I + N G + E+
Sbjct: 320 HLESLTLTGTKISS-IPDDLCQNQKMLRTLDLSYNNIRDLPSFN-------GCRALEEIS 371
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
LQ N+I + + G+ L LDLS N +R I F L ++ LD+S N LT+
Sbjct: 372 LQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS 427
Score = 223 (83.6 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 71/248 (28%), Positives = 121/248 (48%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P + F+Q + NN IT L + + L+ + N ++++ L
Sbjct: 48 LTAVPEGLSAFTQALDISMNN--ITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLK 105
Query: 97 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L ++LQNNQ+ ++ S ++ GL+ L L L N +T D GL +LR + L N +
Sbjct: 106 ELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL 165
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD 214
+ R + + + L L N I ++ D A + L L L +NK++++S
Sbjct: 166 TEVPVR-----PLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHC 220
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADL 273
F GLD+L+ LD+++N L + K LP+L+EL NS++ + D F G P+L L
Sbjct: 221 FDGLDNLETLDLNYNYLDEFPQAIKA-LPSLKELGFHSNSISVIPDGAFGGNPLLRTIHL 279
Query: 274 AHNNIKAI 281
N + +
Sbjct: 280 YDNPLSFV 287
Score = 214 (80.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 80/282 (28%), Positives = 134/282 (47%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L L L N L + + L L +L++L ++ NQL +PS+ I S L SL + N IT
Sbjct: 83 LEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHIT 142
Query: 63 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
S+ + GL +L+ +D N +T V NL L +++L N I+S+ + + + L+
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSS 202
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L+L +N++ GL L T+DL+YN +++F ++ + ++ EL
Sbjct: 203 LVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEF------PQAIKALPSLKELGFH 256
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI-SHNLLTTLEETS 238
N I + DGA G L + L N L + F L L L I +L+ +
Sbjct: 257 SNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLT 316
Query: 239 KTFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIK 279
T LE L ++ ++ + D +L DL++NNI+
Sbjct: 317 GTV--HLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIR 356
Score = 179 (68.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 78/289 (26%), Positives = 131/289 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL +L L L NN+L+++ + + LS LQ L ++ N + ++P D + QL L+ ++
Sbjct: 103 GLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LS 116
N +T + L L LQ + N I+ + F NL +L + L NN+I S++
Sbjct: 163 NSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFD 222
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L++N L EF I+ L L+ + N I+ G N + ++++
Sbjct: 223 GLDNLETLDLNYNYLDEFP-QAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYD 281
Query: 177 LKLQ---HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L ++ NL D + I G S + N T+ + + L K+ I +L
Sbjct: 282 NPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHLES-LTLTGTKISSIPDDLC- 339
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ K L L +S+N++ L F+G L + L N I I
Sbjct: 340 ---QNQKM----LRTLDLSYNNIRDLPS-FNGCRALEEISLQRNQISLI 380
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 77/289 (26%), Positives = 133/289 (46%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN- 58
GL+ L L L+ N + S+ E L +L+ L ++ N L +P ++ S L +L A
Sbjct: 127 GLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVP--VRPLSNLPTLQALTL 184
Query: 59 --NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N I+S+ D L+ L V ++ N+I + + F L NL+++ L N + ++
Sbjct: 185 ALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEFPQAI 244
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L L L N ++ G LRT+ L N ++ F G + ++++
Sbjct: 245 KALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLS-F----VGNSAFHNLSDLH 299
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI-GLDSLKMLDISHNLLTTL 234
L ++ + L G L L L+ K+ +I PDD L+ LD+S+N + L
Sbjct: 300 CLVIRGASLVQWFPNLTGTVHLESLTLTGTKISSI-PDDLCQNQKMLRTLDLSYNNIRDL 358
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
S ALEE+ + N ++ + ++ F GL L DL+ N I+ I+
Sbjct: 359 P--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIH 405
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 56/189 (29%), Positives = 86/189 (45%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 63
L + L +N L + LS L LVI L ++ L SL +I+S
Sbjct: 274 LRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHLESLTLTGTKISS 333
Query: 64 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKL 121
+ D L + L+ ++ +N I + F L+ ISLQ NQI+ + ++ GLT L
Sbjct: 334 IPDDLCQNQKMLRTLDLSYNNIRDL--PSFNGCRALEEISLQRNQISLIKENTFQGLTSL 391
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQGVTNIFELK-- 178
L LS N + E L + +D+S+N++ F T G NQ++ V N F+LK
Sbjct: 392 RILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLVGN-FKLKDA 450
Query: 179 LQHNEIENL 187
L + NL
Sbjct: 451 LAARDFANL 459
Score = 129 (50.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 58/231 (25%), Positives = 106/231 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL-GSLYANNN 59
GL +L L LN N L + L L+ L N + +P + L +++ +N
Sbjct: 223 GLDNLETLDLNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDN 282
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMNSSL 115
++ + + L+ L + ++V+ F NL +L+S++L +I+S+ L
Sbjct: 283 PLSFVGNSAFHNLSDLHC--LVIRGASLVQW--FPNLTGTVHLESLTLTGTKISSIPDDL 338
Query: 116 SGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
K L L LS+N + + L G + L + L N+I+ +N QG+T++
Sbjct: 339 CQNQKMLRTLDLSYNNIRD--LPSFNGCRALEEISLQRNQISLIK-----ENTFQGLTSL 391
Query: 175 FELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
L L N I + GA + ++ LD+S N+L + + GL+ LK++
Sbjct: 392 RILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLV 442
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 179 (68.1 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 78/319 (24%), Positives = 140/319 (43%)
Query: 8 LFLNNNRLK--SLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL 64
L LN+N L S +G G L L L +++NQL + P+ + S + L N+I +
Sbjct: 575 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEI 634
Query: 65 DG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LA 122
+ GL +L+ N+ NQI+ V F++L++L S++L +N + N L+ + L
Sbjct: 635 SNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF-NCNCHLAWFAEWLR 693
Query: 123 YLYLSHNQLTEFLLDDIRG--LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L+ +R +K L + + N G +G ++
Sbjct: 694 KKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEGCLGDGYCPPSCTCTGTVVRCS 753
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N+++ + + S L L N++ I + L SL LD+S+N +T L +
Sbjct: 754 RNQLKEIPRGIPA--ETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFA 811
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI---QLALKTQCQIFGLN 297
L L L +S+N L L + H L L NN++ +++ ++++ + L
Sbjct: 812 NLTKLSTLIISYNKLQCLQR--HALSGL-------NNLRVLSLHGNRISMLPEGSFEDLK 862
Query: 298 STLRIYLEGNPVLCDDSMR 316
S I L NP+ CD ++
Sbjct: 863 SLTHIALGSNPLYCDCGLK 881
Score = 164 (62.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 50/154 (32%), Positives = 77/154 (50%)
Query: 4 DLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRI 61
D+ L L N L + E L+KL++L + NQ+ + + Q L L NNNR+
Sbjct: 101 DVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRL 160
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLT 119
++ + + L ++ N IT V R F+ +L S+ L NNQIT ++ + GL
Sbjct: 161 KAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLV 220
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 153
+L L L++N LT + GL RLR + LS N
Sbjct: 221 ELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDN 254
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 83/330 (25%), Positives = 151/330 (45%)
Query: 4 DLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRI 61
D L L N + L + + +L+ + + N + + D + QL +L N+I
Sbjct: 347 DTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKI 406
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLT 119
L G+ +GL LQ+ ++ N+I+ +R+D F++LH+L +SL +N I S+ N + +
Sbjct: 407 KDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMK 466
Query: 120 KLAYLYLSHNQLTEFLLD-DIRGLKRLRTVDLSYNKINKFGTRNEGKNQV--QGVTNIFE 176
+ ++L+ N F+ D ++R L L N I G R E ++ + + ++ E
Sbjct: 467 SIKTVHLAKNP---FICDCNLRWLADY----LHKNPIETSGARCESPKRMHRRRIESLRE 519
Query: 177 --LKLQHNEIE-NLDG---------ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
K +E+ L G A+ G + +D + L+ I P D I L + ++L
Sbjct: 520 EKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTT-VDCTGRGLKEI-PRD-IPLHTTELL 576
Query: 225 DISHNLLTTLEETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
++ N L + F LP L +L + N LT ++ + F G + + L N IK I
Sbjct: 577 -LNDNELGRISSDG-LFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEI 634
Query: 282 NIQLALKTQCQIFGLNSTLRIYLEGNPVLC 311
+ ++ L GL+ + L N + C
Sbjct: 635 SNKMFL-------GLHQLKTLNLYDNQISC 657
Score = 151 (58.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 50/179 (27%), Positives = 90/179 (50%)
Query: 100 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
++ + +TS+ +S + L L N LT D + L +LR + L+ N+I+
Sbjct: 83 NVDCSHRGLTSVPRKISA--DVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIE 140
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
+N Q + ++ L+L +N ++ + + + L RLD+S+N + T+ F G
Sbjct: 141 -----RNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGA 195
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
SL+ L + +N +T L+E + L LE L +++N+LT L + F GL L L+ N
Sbjct: 196 QSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDN 254
Score = 141 (54.7 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 72/292 (24%), Positives = 126/292 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNN 59
L L L LNNNRLK++ T S L L I N + + + +Q L SL +NN
Sbjct: 147 LVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNN 206
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN------QITSMN 112
+IT LD +GL +L++ ++ N +T + + F L L ++ L +N ++ ++
Sbjct: 207 QITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLS 266
Query: 113 SSLSGLTKLA-YLYL-SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG 170
L T+LA Y S +QL + D+ + + L+ + + G N + +
Sbjct: 267 RFLRSATRLAPYTRCQSPSQLKGQNVADLHD-QEFKCSGLTEHAPMECGAENSCPHPCRC 325
Query: 171 VTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
I + + + ++ L + L L N + + P F L+ +D+S+N
Sbjct: 326 ADGIVDCR--EKSLTSVPVTLPD--DTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNN 381
Query: 231 LTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
++ + + + L L L + N + L F GL L L N I I
Sbjct: 382 ISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCI 433
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 66/267 (24%), Positives = 113/267 (42%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQL--EALPSDIQLFSQLGSLYAN 57
GL +L L LNNN L SL + G L +L+ L + N + S + F + + A
Sbjct: 218 GLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAP 277
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ-NLHN--------LDSI-SLQNNQ 107
R S L+G + + +F + + N D I +
Sbjct: 278 YTRCQS-PSQLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKS 336
Query: 108 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQ 167
+TS+ +L T L L N +TE +RLR +DLS N I++ +
Sbjct: 337 LTSVPVTLPDDT--TELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIA-----HDA 389
Query: 168 VQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
+ G+ + L L N+I++L G G+ L L L+ N++ I D F L SL +L +
Sbjct: 390 LSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSL 449
Query: 227 SHNLLTTLEETSKTFLPALEELFVSHN 253
N + +L + + +++ + ++ N
Sbjct: 450 YDNNIQSLANGTFDAMKSIKTVHLAKN 476
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 52/177 (29%), Positives = 87/177 (49%)
Query: 169 QGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLD-SLKMLDI 226
Q +T + L+L N+I ++ + + L RL L++N+L+ I P++F+ SL LDI
Sbjct: 121 QRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAI-PENFVTSSASLLRLDI 179
Query: 227 SHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
S+N++TT+ +L L + +N +T LD+ F GL L L +NN+ ++
Sbjct: 180 SNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSL---- 235
Query: 286 ALKTQCQIFGLNSTLR-IYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQPDS 341
IFG LR + L NP CD + + + + T++ T CQ S
Sbjct: 236 ----PHNIFGGLGRLRALRLSDNPFACDCHLSWL---SRFLRSATRLAPYTRCQSPS 285
Score = 125 (49.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 43/164 (26%), Positives = 80/164 (48%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 97
L ++P I + L NN + R LTKL++ + NQI + R+ FQ+L +
Sbjct: 91 LTSVPRKISADVERLELQGNNLTVIYETDFQR-LTKLRMLQLTDNQIHTIERNSFQDLVS 149
Query: 98 LDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
L+ + L NN++ ++ + ++ L L +S+N +T +G + LR++ L N+I
Sbjct: 150 LERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQIT 209
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRL 200
++ +G+ + L L +N + +L + G GL RL
Sbjct: 210 CLD-----EHAFKGLVELEILTLNNNNLTSLPHNIFG--GLGRL 246
Score = 119 (46.9 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 44/147 (29%), Positives = 69/147 (46%)
Query: 176 ELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
EL+L+ N I L + L R+DLS+N + I+ D GL L L + N + L
Sbjct: 350 ELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDL 409
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
L +L+ L ++ N ++ + KD F L L L NNI++ LA T
Sbjct: 410 PSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQS----LANGT---F 462
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVID 320
+ S ++L NP +CD ++R + D
Sbjct: 463 DAMKSIKTVHLAKNPFICDCNLRWLAD 489
Score = 98 (39.6 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 140 RGLKR------LRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALM 192
RGLK L T +L N N+ G R + ++ +L+L+ N++ ++ A
Sbjct: 559 RGLKEIPRDIPLHTTELLLND-NELG-RISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE 616
Query: 193 GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSH 252
G + L L NK++ IS F+GL LK L++ N ++ + S L +L L ++
Sbjct: 617 GASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLAS 676
Query: 253 N 253
N
Sbjct: 677 N 677
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 230 (86.0 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 92/337 (27%), Positives = 162/337 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNN 59
+ +L+ L L++N+LK L+ L L L LL ++ N L + P + S L L N N
Sbjct: 447 MNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGN 506
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGL 118
++ ++ LR + L+ ++ N IT++ F+ L NL + L N + ++ + L
Sbjct: 507 QLKTVPLALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDL 566
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L L+ N++ ++ V L N++N + ++ L
Sbjct: 567 PNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDIN------GLFSNMPSLLWLN 620
Query: 179 LQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDS-LKM--LDISHNLLTTL 234
+ N +E+ D G + L LDL N+L ++S + GLDS LK+ LD+S N L +
Sbjct: 621 ISDNRLESFDYGHVPST--LQWLDLHKNRLSSLS--NRFGLDSELKLQTLDVSFNQLQRI 676
Query: 235 EETSKTFLP-ALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
+S +P ++E LF++ N +T +D D F L + DL N I ++I+ +L+
Sbjct: 677 GPSS---IPNSIELLFLNDNLITTVDPDTFMHKTNLTRVDLYANQITTLDIK-SLRI-LP 731
Query: 293 IFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNT 329
++ + Y+ GNP CD + ID ++ IN+ T
Sbjct: 732 VWEHRALPEFYIGGNPFTCDCN----IDWLQKINHIT 764
Score = 200 (75.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 60/219 (27%), Positives = 109/219 (49%)
Query: 71 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAY-LYLSH 128
L +L+V +++ N I+M+ L NL ++L +N+I ++ + L + K+ +YL +
Sbjct: 300 LRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQN 359
Query: 129 NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD 188
N ++ L +L+ +DLS N+I KN G+ + L L HN++ L+
Sbjct: 360 NSISVLNPQLFSNLDQLQALDLSMNQITSTWI---DKNTFVGLIRLVLLNLSHNKLTKLE 416
Query: 189 GALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ ++ L L+L HN+L I+ D F +++L L +SHN L L+ + L L
Sbjct: 417 PEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSL 476
Query: 248 LFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
L + +N+L + D F L +L N +K + + L
Sbjct: 477 LSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLAL 515
Score = 193 (73.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 84/308 (27%), Positives = 141/308 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL L L L++N+L LE ++ L LQ+L + NQLE + +D + L +L ++
Sbjct: 398 GLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSH 457
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
N++ LD L GL L + ++D N + V D F+N L ++L NQ+ ++ +L
Sbjct: 458 NKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALRN 517
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+ L + L N +T +GL L + L N + N + + + N+ L
Sbjct: 518 MRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLE-----NITMHTFRDLPNLQIL 572
Query: 178 KLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L N I ++ GA + + L N+L I+ F + SL L+IS N LE
Sbjct: 573 NLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDIN-GLFSNMPSLLWLNISDN---RLES 628
Query: 237 TSKTFLPA-LEELFVSHNSLTRLDKDFHGLPVLCKA---DLAHNNIKAINIQLALKTQCQ 292
+P+ L+ L + N L+ L F GL K D++ N ++ I ++ +
Sbjct: 629 FDYGHVPSTLQWLDLHKNRLSSLSNRF-GLDSELKLQTLDVSFNQLQRIGPS-SIPNSIE 686
Query: 293 IFGLNSTL 300
+ LN L
Sbjct: 687 LLFLNDNL 694
Score = 176 (67.0 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 77/293 (26%), Positives = 136/293 (46%)
Query: 5 LNWLFLNNNRLKSLEGQLG-TLSKLQLLVIEQNQLEALPS----DIQLFSQLGSLYANNN 59
L L L++N + SL + TLS+L L + +N+L+ + D GS + +
Sbjct: 202 LERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQDVNELGFRDRSQEPTNGSTESTST 261
Query: 60 RITSLDGLLRGLT---KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSL 115
++ + L+ ++ N ++ + F L L +S+ NN I+ + + +L
Sbjct: 262 TESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKAL 321
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
SGL L L LS N++ L ++ ++ + + Y + N N + +
Sbjct: 322 SGLKNLQILNLSSNKIVA-LPTELFA-EQAKIIQEVYLQNNSISVLNP--QLFSNLDQLQ 377
Query: 176 ELKLQHNEIEN--LD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L L N+I + +D +G+ L L+LSHNKL + P+ F L +L++L++ HN L
Sbjct: 378 ALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLE 437
Query: 233 TLEETSKTFLPA--LEELFVSHNSLTRLDK-DFHGLPVLCKADLAHNNIKAIN 282
+ + TF P L L +SHN L LD +GL VL L +N + ++
Sbjct: 438 NI--AADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVH 488
Score = 159 (61.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 74/279 (26%), Positives = 127/279 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L+ L L+NN L + S LQ L + NQL+ +P ++ L ++ N
Sbjct: 470 GLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALRNMRHLRTVDLGEN 529
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
IT + D +GL L + N + + F++L NL ++L N+I + +
Sbjct: 530 MITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEM 589
Query: 119 TK-LAYLYLSHNQLTEFLLDDIRGL----KRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
T + + L N+L +DI GL L +++S N++ F + G V +
Sbjct: 590 TSSIQAVRLDGNEL-----NDINGLFSNMPSLLWLNISDNRLESF---DYGH-----VPS 636
Query: 174 IFE-LKLQHNEIENLDGALMGIHG---LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
+ L L N + +L G+ L LD+S N+L+ I P +S+++L ++ N
Sbjct: 637 TLQWLDLHKNRLSSLSNRF-GLDSELKLQTLDVSFNQLQRIGPSSIP--NSIELLFLNDN 693
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPV 267
L+TT++ + L + + N +T LD K LPV
Sbjct: 694 LITTVDPDTFMHKTNLTRVDLYANQITTLDIKSLRILPV 732
Score = 132 (51.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 51 LGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 109
L LYANN+ + + + GL +L + +++ N I + +EF NL NL + LQ+N+I
Sbjct: 885 LAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSNKIA 944
Query: 110 SM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
S+ N S L KL L L N+L F + + L + L+ N+
Sbjct: 945 SIANGSFQMLRKLEVLRLDGNRLMHFEVWQLSANPYLVEISLADNQ 990
Score = 38 (18.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 152 YNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIEN 186
+N +N+ + + V G+ E + HN N
Sbjct: 1332 FNTMNQLSKKQQRDLSVAGMAKTLEHQHHHNHQAN 1366
>FB|FBgn0034476 [details] [associations]
symbol:Toll-7 "Toll-7" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISS;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0002752 "cell surface pattern recognition
receptor signaling pathway" evidence=IC] [GO:0008329 "pattern
recognition receptor activity" evidence=IC] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0046790 "virion binding"
evidence=IDA] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0010508 "positive regulation of autophagy"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 EMBL:AE013599
GO:GO:0016021 GO:GO:0009897 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0010508 GO:GO:0051607
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0008329
GO:GO:0046790 GO:GO:0002752 GeneTree:ENSGT00700000104442
SUPFAM:SSF52200 FlyBase:FBgn0034476 EMBL:AF247765
RefSeq:NP_523797.1 UniGene:Dm.2660 SMR:Q7KIN0
EnsemblMetazoa:FBtr0086336 GeneID:37272 KEGG:dme:Dmel_CG8595
UCSC:CG8595-RA CTD:37272 InParanoid:Q7KIN0 OMA:NHAFIGR
GenomeRNAi:37272 NextBio:802851 Uniprot:Q7KIN0
Length = 1446
Score = 229 (85.7 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 77/277 (27%), Positives = 129/277 (46%)
Query: 26 SKLQLLVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFN 82
S+LQ+L N+L ++ I +L L N ++ L G L GL L++ N+ N
Sbjct: 247 SELQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNN 306
Query: 83 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDD--I 139
+ + F L I LQ N++ + L L +L + LS NQLT +D+
Sbjct: 307 HLETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTF 366
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSR 199
GL RL ++L++N + + R + + N+ + H E D A + ++ L
Sbjct: 367 AGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIE----DNAFLPLYNLHT 422
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
L+L+ N+L T+ F GL L L +++NL++ +E L+EL +S N L +
Sbjct: 423 LNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVP 482
Query: 260 KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGL 296
+ L +L DL N I+ + Q + K Q+ GL
Sbjct: 483 RALQDLAMLRTLDLGENQIRTFDNQ-SFKNLHQLTGL 518
Score = 196 (74.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 76/268 (28%), Positives = 128/268 (47%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL L + L+NN L++L EG +L+ + ++QN+L LP + QL + +
Sbjct: 294 GLASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSG 353
Query: 59 NRITS--LDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSS 114
N++TS +D GL +L V N+ N +T + F+ L+ L ++L+NN I + +++
Sbjct: 354 NQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNA 413
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDD--IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVT 172
L L L L+ N+L LDD GL L + L+ N I+ KN +
Sbjct: 414 FLPLYNLHTLNLAENRL--HTLDDKLFNGLYVLSKLTLNNNLISVVEPA-VFKN----CS 466
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
++ EL L N++ + AL + L LDL N++RT F L L L + N +
Sbjct: 467 DLKELDLSSNQLNEVPRALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIG 526
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK 260
+ LP L L ++ N + +++
Sbjct: 527 NITVGMFQDLPRLSVLNLAKNRIQSIER 554
Score = 194 (73.4 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 85/340 (25%), Positives = 149/340 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNN 59
L +L+ L L NRL +L+ +L L L L + N + + P+ + S L L ++N
Sbjct: 417 LYNLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSN 476
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGL 118
++ + L+ L L+ ++ NQI F+NLH L + L +NQI ++ + L
Sbjct: 477 QLNEVPRALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGMFQDL 536
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+L+ L L+ N++ L + L N + + ++ L
Sbjct: 537 PRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADIN------GVFATLVSLLWLN 590
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDS---LKMLDISHNLLTTLE 235
L N + D A + + L LD+ N + + ++ L +K LD SHN +T +
Sbjct: 591 LSENHLVWFDYAFIPSN-LKWLDIHGNYIEALG--NYYKLQEEIRVKTLDASHNRITEIG 647
Query: 236 ETSKTFLP-ALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
S +P +E LF+++N + + + F L + DL N + + +Q L+ +
Sbjct: 648 PMS---IPNTIELLFINNNLIGNVQPNAFVDKANLARVDLYANQLSKLQLQ-QLRV-APV 702
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINN-NTKIH 332
YL GNP CD +M D ++ INN T+ H
Sbjct: 703 VAPKPLPEFYLGGNPFECDCTM----DWLQRINNLTTRQH 738
Score = 189 (71.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 79/288 (27%), Positives = 130/288 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFS-QLGSLYANNN 59
L L L L N L L G+ L L+ L+++ + N LE LP + S +L ++ N
Sbjct: 271 LRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQN 330
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDE--FQNLHNLDSISLQNNQITSMN-SSL 115
+ L GL L +L V ++ NQ+T D F L L ++L +N +T ++ +
Sbjct: 331 ELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTF 390
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L L L L +N + + L L T++L+ N+++ + G+ +
Sbjct: 391 KELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDK-----LFNGLYVLS 445
Query: 176 ELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
+L L +N I ++ A+ L LDLS N+L + P L L+ LD+ N + T
Sbjct: 446 KLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEV-PRALQDLAMLRTLDLGENQIRTF 504
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
+ S L L L + N + + F LP L +LA N I++I
Sbjct: 505 DNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSI 552
Score = 174 (66.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 82/295 (27%), Positives = 138/295 (46%)
Query: 15 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLD-------- 65
L+ LG L +L L + N L LPS L L NRI + +
Sbjct: 178 LELFPDSLGGLKQLTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNRIRTAEQMGFADMN 237
Query: 66 -GLLRGL--TKLQVFNMDFNQITMVRRD-EFQNLHNLDSISLQNNQITSMNS-SLSGLTK 120
G G ++LQV + N++ + L L ++L N ++ ++ +L+GL
Sbjct: 238 CGAGSGSAGSELQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLAS 297
Query: 121 LAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L + LS+N L E L + + G K LR + L N++ + + + V ++ +L
Sbjct: 298 LRIVNLSNNHL-ETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQL 356
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N ++N A G+ L L+L+HN L I F L L++L++ +N + +E+ +
Sbjct: 357 TSNHVDNTTFA--GLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNA- 413
Query: 240 TFLPA--LEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQC 291
FLP L L ++ N L LD K F+GL VL K L +NN+ ++ ++ A+ C
Sbjct: 414 -FLPLYNLHTLNLAENRLHTLDDKLFNGLYVLSKLTL-NNNLISV-VEPAVFKNC 465
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 81/308 (26%), Positives = 138/308 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
GL L L L +N L ++ + L LQ+L + N + + + L L +L
Sbjct: 368 GLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAE 427
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
NR+ +LD L GL L ++ N I++V F+N +L + L +NQ+ + +L
Sbjct: 428 NRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPRALQD 487
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L L L L NQ+ F + L +L + L N+I G G Q + + L
Sbjct: 488 LAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQI---GNITVG--MFQDLPRLSVL 542
Query: 178 KLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L N I++++ G+ L + L N L I+ F L SL L++S N L +
Sbjct: 543 NLAKNRIQSIERGSFDKNFELEAIRLDRNFLADIN-GVFATLVSLLWLNLSENHLVWFDY 601
Query: 237 TSKTFLPA-LEELFVSHNSLTRLDKDFHGLP--VLCKA-DLAHNNIKAINIQLALKTQCQ 292
F+P+ L+ L + N + L +++ L + K D +HN I I +++ +
Sbjct: 602 A---FIPSNLKWLDIHGNYIEALG-NYYKLQEEIRVKTLDASHNRITEIG-PMSIPNTIE 656
Query: 293 IFGLNSTL 300
+ +N+ L
Sbjct: 657 LLFINNNL 664
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 60/203 (29%), Positives = 94/203 (46%)
Query: 92 FQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLS-HN------QLTEFLLDDIRGLK 143
F L L+++ L + ++ + N++ GL L L LS HN + E D + GLK
Sbjct: 130 FARLQTLEALRLDSCKLLQLPNNAFEGLATLKSLRLSTHNSEWGPTRTLELFPDSLGGLK 189
Query: 144 RLRTVDLSYNKINKFGTR---NEGKNQVQGVT-NIFELKLQHNEIENLDGALMGIHG--L 197
+L +DL N + + + G QV +T N Q + GA G G L
Sbjct: 190 QLTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNRIRTAEQMGFADMNCGAGSGSAGSEL 249
Query: 198 SRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
LD SHN+LR+IS I L L+ L++++N L+ L + L +L + +S+N L
Sbjct: 250 QVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLE 309
Query: 257 RLDKD-FHGLPVLCKADLAHNNI 278
L + F G L + L N +
Sbjct: 310 TLPEGLFAGSKELREIHLQQNEL 332
>UNIPROTKB|Q6EMK4 [details] [associations]
symbol:VASN "Vasorin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR003961
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
SMART:SM00181 GO:GO:0016021 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 EMBL:AY166584 EMBL:AY358298 EMBL:AY358299
EMBL:BC013767 EMBL:BC068575 IPI:IPI00395488 RefSeq:NP_612449.2
UniGene:Hs.372579 ProteinModelPortal:Q6EMK4 SMR:Q6EMK4
DIP:DIP-46245N STRING:Q6EMK4 PhosphoSite:Q6EMK4 DMDM:74748436
PaxDb:Q6EMK4 PeptideAtlas:Q6EMK4 PRIDE:Q6EMK4
Ensembl:ENST00000304735 GeneID:114990 KEGG:hsa:114990
UCSC:uc002cwj.1 CTD:114990 GeneCards:GC16P004421 HGNC:HGNC:18517
HPA:HPA011246 MIM:608843 neXtProt:NX_Q6EMK4 PharmGKB:PA134974883
eggNOG:NOG273568 HOGENOM:HOG000261606 HOVERGEN:HBG084318
InParanoid:Q6EMK4 OMA:VTQLRPN OrthoDB:EOG4GTKD4 PhylomeDB:Q6EMK4
GenomeRNAi:114990 NextBio:79480 Bgee:Q6EMK4 CleanEx:HS_VASN
Genevestigator:Q6EMK4 GermOnline:ENSG00000168140 Uniprot:Q6EMK4
Length = 673
Score = 224 (83.9 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 71/250 (28%), Positives = 124/250 (49%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD 65
L++ N + L+ G L LQLL + QNQ+ +LPS + Q + L +L NR+ +
Sbjct: 57 LYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEIT 116
Query: 66 G-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
RGL +L+ + N+I ++ F L L + LQ+N++ ++ L L +L L
Sbjct: 117 NETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRAL-PPLR-LPRLLLL 174
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
LSHN L L+ G+ L T ++ ++ G + + + N+ +L + N++
Sbjct: 175 DLSHNSL--LALEP--GI--LDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQL 228
Query: 185 ENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
E + + G+ GL+RL L+ N ++ + P+D GL +L+ LD+S+ L L P
Sbjct: 229 ERVPPVIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFP 288
Query: 244 ALEELFVSHN 253
L L + N
Sbjct: 289 RLRLLAAARN 298
Score = 157 (60.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 66/230 (28%), Positives = 103/230 (44%)
Query: 57 NNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SS 114
+ N+I SL G+ + L L ++ N++ + + F+ L L+ + L N+I + +
Sbjct: 84 SQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGA 143
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L +L L L N+L L +R L RL +DLS+N + G + N+
Sbjct: 144 FDTLDRLLELKLQDNELRA--LPPLR-LPRLLLLDLSHNSLLAL---EPG---ILDTANV 194
Query: 175 FELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL-LT 232
L+L ++ LD L + L LD+S N+L + P GL L L ++ N +
Sbjct: 195 EALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPV-IRGLRGLTRLRLAGNTRIA 253
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFHGL-PVLCKADLAHNNIKAI 281
L L AL+EL VS+ SL L D GL P L A N +
Sbjct: 254 QLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCV 303
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 45/156 (28%), Positives = 84/156 (53%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L+L NR++ ++ G TL +L L ++ N+L ALP ++L +L L ++N
Sbjct: 122 GLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP-LRL-PRLLLLDLSHN 179
Query: 60 RITSLD-GLL--RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
+ +L+ G+L + L++ + Q+ +NLH+LD + +NQ+ + +
Sbjct: 180 SLLALEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLD---VSDNQLERVPPVIR 236
Query: 117 GLTKLAYLYLSHN-QLTEFLLDDIRGLKRLRTVDLS 151
GL L L L+ N ++ + +D+ GL L+ +D+S
Sbjct: 237 GLRGLTRLRLAGNTRIAQLRPEDLAGLAALQELDVS 272
>ZFIN|ZDB-GENE-030616-572 [details] [associations]
symbol:scrib "scribbled homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IMP] [GO:0014021 "secondary neural
tube formation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0060027
"convergent extension involved in gastrulation" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA;ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0045211 "postsynaptic membrane" evidence=ISS] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0050918 "positive chemotaxis" evidence=ISS]
[GO:0005913 "cell-cell adherens junction" evidence=ISS] [GO:0016337
"cell-cell adhesion" evidence=ISS] [GO:0042734 "presynaptic
membrane" evidence=ISS] [GO:0032863 "activation of Rac GTPase
activity" evidence=ISS] [GO:0031252 "cell leading edge"
evidence=ISS] [GO:0035089 "establishment of apical/basal cell
polarity" evidence=ISS] [GO:0060561 "apoptotic process involved in
morphogenesis" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 ZFIN:ZDB-GENE-030616-572
GO:GO:0005886 GO:GO:0000132 GO:GO:0005737 GO:GO:0001764
GO:GO:0008283 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0005913 GO:GO:0043065 GO:GO:0016337 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 GO:GO:0050918 GO:GO:0032863
GO:GO:0060027 GO:GO:0045930 GO:GO:0060561 GO:GO:0035089
GeneTree:ENSGT00650000093182 CTD:23513 KO:K16175 EMBL:AB188388
IPI:IPI00650410 RefSeq:NP_001007176.1 UniGene:Dr.41478 HSSP:Q14160
ProteinModelPortal:Q4H4B6 SMR:Q4H4B6 STRING:Q4H4B6 PRIDE:Q4H4B6
Ensembl:ENSDART00000074212 GeneID:368473 KEGG:dre:368473
HOGENOM:HOG000113281 InParanoid:Q4H4B6 OMA:GHRNSLE
OrthoDB:EOG44BB1C NextBio:20812953 ArrayExpress:Q4H4B6 Bgee:Q4H4B6
GO:GO:0014021 Uniprot:Q4H4B6
Length = 1724
Score = 229 (85.7 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 79/259 (30%), Positives = 130/259 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L LN+ L+SL +G LS L L + +N L++LPS + +L L +N +
Sbjct: 127 LRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVL 186
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L L L L+ +D NQ++ + E NL L + + N+++ + + +SGL L
Sbjct: 187 EVLPDTLGALPNLRELWLDRNQLSSLP-PELGNLRQLVCLDVSENRLSELPTEISGLIAL 245
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L E L D I LK+L + ++ N++ T + G+ + N+ EL L
Sbjct: 246 TDLLLSEN-LLEILPDSIGSLKKLSILKVNQNRLVHL-TDSIGECE-----NLTELMLTE 298
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL--EETSK 239
N +++L +L + L+ L++ N+L ++ P + G SL +L + N L L E +
Sbjct: 299 NLLQSLPRSLGKLKKLTNLNVDRNRLSSV-PAELGGCVSLNVLSLRDNRLGKLPPELANA 357
Query: 240 TFLPALEELFVSHNSLTRL 258
T L L+ V+ N L L
Sbjct: 358 TELHVLD---VAGNRLQNL 373
Score = 209 (78.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 74/277 (26%), Positives = 129/277 (46%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L L+ N+L+ L L L+ L + N+++ LP D+ F+QL L + N I+ +
Sbjct: 38 LEELLLDANQLRELPKPFFRLHNLRKLGLSDNEIQKLPPDVANFTQLVELDISRNDISEI 97
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L++ + N +T + D F L L +SL + + S+ + + L+ L L
Sbjct: 98 PENIKFCQSLEIADFSGNPLTRLP-DGFTQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTL 156
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N L + L + L +L +DL N + + + + N+ EL L N++
Sbjct: 157 ELREN-LLKSLPSSLSFLVKLEQLDLGSNVLEVL------PDTLGALPNLRELWLDRNQL 209
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+L L + L LD+S N+L + P + GL +L L +S NLL L ++ + L
Sbjct: 210 SSLPPELGNLRQLVCLDVSENRLSEL-PTEISGLIALTDLLLSENLLEILPDSIGS-LKK 267
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L L V+ N L L L + L N ++++
Sbjct: 268 LSILKVNQNRLVHLTDSIGECENLTELMLTENLLQSL 304
Score = 176 (67.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+L+ N+L SL +LG L +L L + +N+L LP++I L L + N +
Sbjct: 196 LPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEISGLIALTDLLLSENLL 255
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + L KL + ++ N++ + D NL + L N + S+ SL L KL
Sbjct: 256 EILPDSIGSLKKLSILKVNQNRLVHLT-DSIGECENLTELMLTENLLQSLPRSLGKLKKL 314
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L + N+L+ + ++ G L + L N++ K ++ T + L +
Sbjct: 315 TNLNVDRNRLSS-VPAELGGCVSLNVLSLRDNRLGKLPP------ELANATELHVLDVAG 367
Query: 182 NEIENLDGALMGIHGLSRLDLSHNK 206
N ++NL AL ++ L + L+ N+
Sbjct: 368 NRLQNLPFALANLN-LKAMWLAENQ 391
Score = 171 (65.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 70/292 (23%), Positives = 129/292 (44%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
T L L ++ N + + + L++ N L LP L L N+ +
Sbjct: 82 TQLVELDISRNDISEIPENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLAHLSLNDVSLQ 141
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
SL + L+ L + N + + L L+ + L +N + + +L L L
Sbjct: 142 SLPNDIGNLSNLVTLELRENLLKSLP-SSLSFLVKLEQLDLGSNVLEVLPDTLGALPNLR 200
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L+L NQL+ L ++ L++L +D+S N++++ T ++ G+ + +L L N
Sbjct: 201 ELWLDRNQLSS-LPPELGNLRQLVCLDVSENRLSELPT------EISGLIALTDLLLSEN 253
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKTF 241
+E L ++ + LS L ++ N+L ++ D IG ++L L ++ NLL +L S
Sbjct: 254 LLEILPDSIGSLKKLSILKVNQNRLVHLT--DSIGECENLTELMLTENLLQSLPR-SLGK 310
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
L L L V N L+ + + G L L N + + +LA T+ +
Sbjct: 311 LKKLTNLNVDRNRLSSVPAELGGCVSLNVLSLRDNRLGKLPPELANATELHV 362
Score = 169 (64.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 66/266 (24%), Positives = 123/266 (46%)
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
D + R L+ +D NQ+ + + F+ LHNL + L +N+I + ++ T+L L
Sbjct: 29 DEIYRYNRSLEELLLDANQLRELPKPFFR-LHNLRKLGLSDNEIQKLPPDVANFTQLVEL 87
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF--G-TRNEG--------------KNQ 167
+S N ++E + ++I+ + L D S N + + G T+ G N
Sbjct: 88 DISRNDISE-IPENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLAHLSLNDVSLQSLPND 146
Query: 168 VQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDIS 227
+ ++N+ L+L+ N +++L +L + L +LDL N L + PD L +L+ L +
Sbjct: 147 IGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEVL-PDTLGALPNLRELWLD 205
Query: 228 HNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLAL 287
N L++L L L L VS N L+ L + GL L L+ N ++ + +
Sbjct: 206 RNQLSSLPPELGN-LRQLVCLDVSENRLSELPTEISGLIALTDLLLSENLLEILPDSIGS 264
Query: 288 KTQCQIFGLNSTLRIYLEGNPVLCDD 313
+ I +N ++L + C++
Sbjct: 265 LKKLSILKVNQNRLVHLTDSIGECEN 290
Score = 151 (58.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 53/189 (28%), Positives = 91/189 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+ N L+ L +G+L KL +L + QN+L L I L L N
Sbjct: 241 GLIALTDLLLSENLLEILPDSIGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENL 300
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ SL L L KL N+D N+++ V E +L+ +SL++N++ + L+ T+
Sbjct: 301 LQSLPRSLGKLKKLTNLNVDRNRLSSVPA-ELGGCVSLNVLSLRDNRLGKLPPELANATE 359
Query: 121 LAYLYLSHNQLTE--FLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L ++ N+L F L ++ LK + + + KF T ++ + + +T +
Sbjct: 360 LHVLDVAGNRLQNLPFALANLN-LKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQ 418
Query: 179 LQHNEIENL 187
+ +ENL
Sbjct: 419 QPSSSLENL 427
Score = 132 (51.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 50/202 (24%), Positives = 93/202 (46%)
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 143
+T V + ++ +L+ + L NQ+ + L L L LS N++ + L D+
Sbjct: 24 LTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHNLRKLGLSDNEIQK-LPPDVANFT 82
Query: 144 RLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLS 203
+L +D+S N I++ ++ ++ N + L + GL+ L L+
Sbjct: 83 QLVELDISRNDISEI------PENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLAHLSLN 136
Query: 204 HNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFH 263
L+++ P+D L +L L++ NLL +L +S +FL LE+L + N L L
Sbjct: 137 DVSLQSL-PNDIGNLSNLVTLELRENLLKSLP-SSLSFLVKLEQLDLGSNVLEVLPDTLG 194
Query: 264 GLPVLCKADLAHNNIKAINIQL 285
LP L + L N + ++ +L
Sbjct: 195 ALPNLRELWLDRNQLSSLPPEL 216
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 223 (83.6 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 88/316 (27%), Positives = 148/316 (46%)
Query: 4 DLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRI 61
D L L+ NRL L+ G L LS LQ L + NQL L P L +L NR+
Sbjct: 61 DTELLDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRL 120
Query: 62 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLT 119
+ G+ GL+ L + ++ NQI + F L +L + + +N + + + +GL
Sbjct: 121 RIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLA 180
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
KL+ L L L+ + GL R L ++ + ++G+ + EL++
Sbjct: 181 KLSTLTLERCNLST-----VPGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEI 235
Query: 180 Q-HNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
+E LD G+L+G++ LS L ++ L ++ L L++LD+S N ++ +
Sbjct: 236 HLWPSLEALDPGSLVGLN-LSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPAR 294
Query: 238 SKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGL 296
+ L L+EL +S LT + FHGL D+A N ++ + + A + ++
Sbjct: 295 RLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLE-ETAFPSPDKLV-- 351
Query: 297 NSTLRIYLEGNPVLCD 312
TLR L GNP+ CD
Sbjct: 352 --TLR--LSGNPLTCD 363
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 71/262 (27%), Positives = 120/262 (45%)
Query: 26 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI 84
S+ Q ++ QLEA+P + L ++L L + NR+ L G+L L+ LQ ++ +NQ+
Sbjct: 39 SQPQAVLCGHRQLEAVPGGLPLDTELLDL--SGNRLWGLQQGMLSRLSLLQELDLSYNQL 96
Query: 85 TMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLK 143
+ + F L +L ++ LQ N++ M + SGL+ L L L NQ+ FL L
Sbjct: 97 STLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELG 156
Query: 144 RLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDL 202
L+ +++ N + F G+ + L L+ + + G AL + L L L
Sbjct: 157 SLQKLEVGDNHL-VF----VAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALRL 211
Query: 203 SHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALE--ELFVSHNSLTRLD- 259
+ + GL LK L+I +L +LE L L L ++ +L+ +
Sbjct: 212 RELDIGRLPAGALRGLGQLKELEI--HLWPSLEALDPGSLVGLNLSSLAITRCNLSSVPF 269
Query: 260 KDFHGLPVLCKADLAHNNIKAI 281
+ + L L DL+ N I AI
Sbjct: 270 QALYHLSFLRVLDLSQNPISAI 291
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 75/263 (28%), Positives = 112/263 (42%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---- 55
GL L L L NRL+ + G LS L LL + NQ+ L D F +LGSL
Sbjct: 106 GLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQI-VLFLD-GAFGELGSLQKLEV 163
Query: 56 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-S 114
+N+ + G GL KL ++ ++ V L L ++ L+ I + + +
Sbjct: 164 GDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGA 223
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L GL +L L + E L D L L L+ + N + + ++ +
Sbjct: 224 LRGLGQLKELEIHLWPSLEAL--DPGSLVGLNLSSLAITRCNLSSVPFQA---LYHLSFL 278
Query: 175 FELKLQHNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
L L N I + L + L L LS L +I+ F GL + +LD++ N L T
Sbjct: 279 RVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQT 338
Query: 234 LEETSKTFLPALEELFVSHNSLT 256
LEET+ L L +S N LT
Sbjct: 339 LEETAFPSPDKLVTLRLSGNPLT 361
>UNIPROTKB|O77742 [details] [associations]
symbol:OMD "Osteomodulin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005578 eggNOG:COG4886 GO:GO:0007155
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000234447
HOVERGEN:HBG108061 EMBL:U67279 IPI:IPI00706000 RefSeq:NP_776372.1
UniGene:Bt.114 ProteinModelPortal:O77742 STRING:O77742 PRIDE:O77742
GeneID:280885 KEGG:bta:280885 CTD:4958 InParanoid:O77742 KO:K08124
OrthoDB:EOG415GDJ NextBio:20805020 Uniprot:O77742
Length = 422
Score = 219 (82.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 68/234 (29%), Positives = 119/234 (50%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM- 111
S+Y +N ++ ++ + + QV+ + FN+I V D F N +L I+L +N+I S
Sbjct: 75 SMYCDNRKLKTIPNIPAHIQ--QVY-LQFNEIEAVTADSFINATHLKEINLSHNKIKSQK 131
Query: 112 --NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
+ + L L L+L HN L +F + L+R + L YN+I++ T N V
Sbjct: 132 IDHGVFATLPNLLQLHLQHNNLEDFPFPLPKSLER---IFLGYNEISRLQT-----NAVN 183
Query: 170 GVTNIFELKLQHNEIENL---DGALMGIHGLSRLDLSHNKLRTISPDDFIGL-DSLKMLD 225
G+ N+ L L N+I++ + L + L +L+L +N+L ++ P GL SL L
Sbjct: 184 GLVNLTMLDLCFNKIDDSVLQEKVLAKMEKLMQLNLCNNRLESMPP----GLPSSLMYLS 239
Query: 226 ISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIK 279
+ +N ++++ E LP L L +SHN L + + L L + ++ HN +K
Sbjct: 240 LENNSISSIPENYFNKLPKLHALRISHNKLQDIPYNIFNLSNLIELNVGHNKLK 293
Score = 157 (60.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 63/233 (27%), Positives = 111/233 (47%)
Query: 3 TDLNWLFLNNNRLKSLE---GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L + L++N++KS + G TL L L ++ N LE P L L ++ N
Sbjct: 115 THLKEINLSHNKIKSQKIDHGVFATLPNLLQLHLQHNNLEDFP--FPLPKSLERIFLGYN 172
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
I+ L + GL L + ++ FN+I ++++ + L ++L NN++ SM L
Sbjct: 173 EISRLQTNAVNGLVNLTMLDLCFNKIDDSVLQEKVLAKMEKLMQLNLCNNRLESMPPGLP 232
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI-----NKFGTRN--E---GKN 166
+ L YL L +N ++ + L +L + +S+NK+ N F N E G N
Sbjct: 233 --SSLMYLSLENNSISSIPENYFNKLPKLHALRISHNKLQDIPYNIFNLSNLIELNVGHN 290
Query: 167 QVQGV----TNIFELKLQHNEIENLDGALM-------GIHGLSRLDLSHNKLR 208
+++ N+ L L++NEIEN++ +M H L+ + + NKL+
Sbjct: 291 KLKQAFYIPRNLEHLYLENNEIENVNVTVMCPSVDPLHYHHLTHIRIDQNKLK 343
>UNIPROTKB|F1SF23 [details] [associations]
symbol:LOC100520342 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 SMART:SM00082 GO:GO:0030198 GO:GO:0000122
InterPro:IPR000372 SMART:SM00013 GO:GO:0030512 GO:GO:0005614
GeneTree:ENSGT00700000104286 EMBL:CU694620 RefSeq:XP_003121288.1
UniGene:Ssc.79026 Ensembl:ENSSSCT00000004699 GeneID:100520342
KEGG:ssc:100520342 OMA:LPHLKHM Uniprot:F1SF23
Length = 512
Score = 220 (82.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 93/355 (26%), Positives = 162/355 (45%)
Query: 5 LNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRIT 62
L L LN+N + L L KL +L ++ N + +L PS + L SL + N I
Sbjct: 118 LEVLKLNDNSISVLHRSDFEGLKKLTILELKNNLISSLSPSTLSSLVSLQSLVLDGNSIE 177
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
+++G L L+ L +M+ N++ ++ F +L +L +SL +N +T + +L L
Sbjct: 178 TVEGPL-ALSHLTHMSMENNKLHLLPAGFFTSLQSLQFLSLSSNFLTQIPINLP--KSLL 234
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L + N+L +D++ L+ L + LS N ++ F +G Q + N+ L+L N
Sbjct: 235 SLKMERNRLKVVSFEDLKHLENLSHLYLSENSLSSF----DG---AQLLANLTTLELSQN 287
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+++ L L L +LD+S+N ++ ++ DF L LK L + +N+++ E +
Sbjct: 288 QLQMLPLRLPA--RLQKLDISNNLIQKVTAQDFQDLRDLKHLFLDNNIVSLFEAGALQRC 345
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKT--QCQIFGLNST- 299
L L + N L + G L + DL N I+ I + LK Q Q+ L +
Sbjct: 346 SQLSNLALEQNLLLSIPLRLPG--TLARLDLKGNAIQDI-AERELKDLKQLQVLNLRNNK 402
Query: 300 --------------LR-IYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
LR +YL+GNP C S+ + ++ T + G P
Sbjct: 403 ISALDLKALEVLPRLRYLYLDGNPWNCTCSLLRAREVLKA--KGTDVRGGRCAAP 455
Score = 196 (74.1 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 89/290 (30%), Positives = 136/290 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L NN + SL L +L LQ LV++ N +E + + L S L + NN
Sbjct: 138 GLKKLTILELKNNLISSLSPSTLSSLVSLQSLVLDGNSIETVEGPLAL-SHLTHMSMENN 196
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNL-HNLDSISLQNNQITSMN-SSLS 116
++ L G L LQ ++ N +T + NL +L S+ ++ N++ ++ L
Sbjct: 197 KLHLLPAGFFTSLQSLQFLSLSSNFLTQIPI----NLPKSLLSLKMERNRLKVVSFEDLK 252
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK--------NQV 168
L L++LYLS N L+ F D + L L T++LS N++ R + N +
Sbjct: 253 HLENLSHLYLSENSLSSF--DGAQLLANLTTLELSQNQLQMLPLRLPARLQKLDISNNLI 310
Query: 169 QGVT--NIFELK-LQH----NEIENL--DGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
Q VT + +L+ L+H N I +L GAL LS L L N L +I P G
Sbjct: 311 QKVTAQDFQDLRDLKHLFLDNNIVSLFEAGALQRCSQLSNLALEQNLLLSI-PLRLPG-- 367
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVL 268
+L LD+ N + + E L L+ L + +N ++ LD K LP L
Sbjct: 368 TLARLDLKGNAIQDIAERELKDLKQLQVLNLRNNKISALDLKALEVLPRL 417
Score = 172 (65.6 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 68/255 (26%), Positives = 119/255 (46%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L+ L + + NN+L L G +L LQ L + N L +P I L L SL NR
Sbjct: 185 LSHLTHMSMENNKLHLLPAGFFTSLQSLQFLSLSSNFLTQIP--INLPKSLLSLKMERNR 242
Query: 61 --ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+ S + L + L L + N ++ D Q L NL ++ L NQ+ + L
Sbjct: 243 LKVVSFEDL-KHLENLSHLYLSENSLSSF--DGAQLLANLTTLELSQNQLQMLPLRLPA- 298
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+L L +S+N + + D + L+ L+ + L N ++ F +Q + + L
Sbjct: 299 -RLQKLDISNNLIQKVTAQDFQDLRDLKHLFLDNNIVSLFEA-----GALQRCSQLSNLA 352
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L+ N + ++ L G L+RLDL N ++ I+ + L L++L++ +N ++ L+ +
Sbjct: 353 LEQNLLLSIPLRLPGT--LARLDLKGNAIQDIAERELKDLKQLQVLNLRNNKISALDLKA 410
Query: 239 KTFLPALEELFVSHN 253
LP L L++ N
Sbjct: 411 LEVLPRLRYLYLDGN 425
Score = 153 (58.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 66/281 (23%), Positives = 131/281 (46%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L++++++++ L+ + L+ ++ + E++ +D + S L +L N++ +
Sbjct: 52 LYISHSKIQHLQLSNFIQMLALEDFILLASGTESVKNDTFKTLSTLKTLELWKNKLRRIP 111
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYL 124
L L+V ++ N I+++ R +F+ L L + L+NN I+S++ S+LS L L L
Sbjct: 112 SALPA--SLEVLKLNDNSISVLHRSDFEGLKKLTILELKNNLISSLSPSTLSSLVSLQSL 169
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N + ++ L L + + NK++ + ++ L L N +
Sbjct: 170 VLDGNSIET--VEGPLALSHLTHMSMENNKLHLLPA-----GFFTSLQSLQFLSLSSNFL 222
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ L L L + N+L+ +S +D L++L L +S N L++ + L
Sbjct: 223 TQIPINLP--KSLLSLKMERNRLKVVSFEDLKHLENLSHLYLSENSLSSFDGAQ--LLAN 278
Query: 245 LEELFVSHNSLTRLDKDFHGLPV-LCKADLAHNNIKAINIQ 284
L L +S N L L LP L K D+++N I+ + Q
Sbjct: 279 LTTLELSQNQLQMLPLR---LPARLQKLDISNNLIQKVTAQ 316
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 37/158 (23%), Positives = 79/158 (50%)
Query: 102 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
S+Q ++ + S + TK LY+SH+++ L + ++ L D + GT
Sbjct: 32 SVQCYRLLEVPSGIPSTTKK--LYISHSKIQHLQLSNF--IQMLALEDFI---LLASGTE 84
Query: 162 NEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSL 221
+ + + ++ + L+L N++ + AL L L L+ N + + DF GL L
Sbjct: 85 SVKNDTFKTLSTLKTLELWKNKLRRIPSALPA--SLEVLKLNDNSISVLHRSDFEGLKKL 142
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
+L++ +NL+++L ++ + L +L+ L + NS+ ++
Sbjct: 143 TILELKNNLISSLSPSTLSSLVSLQSLVLDGNSIETVE 180
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 141 (54.7 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 39/124 (31%), Positives = 67/124 (54%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + I +NQ+ + P Q L SL N+IT + G
Sbjct: 128 LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKG 187
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 125
L GL LQ+ ++ N+I +R + FQ+L +L +SL +N++ +++ L + L + L+
Sbjct: 188 LFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLH 247
Query: 126 LSHN 129
L+ N
Sbjct: 248 LAQN 251
Score = 134 (52.2 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 124 LYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L+ N+++ I + L LR ++LS N+I + EG G ++ EL L N
Sbjct: 351 LRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEV---KEGA--FDGAASVQELVLTGN 405
Query: 183 EIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
++E G A G+ GL L L N + +S D F GL S+++L + N +TT+ + T
Sbjct: 406 QLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTT 465
Query: 242 LPALEELFVSHN 253
L +L + + N
Sbjct: 466 LVSLSTINLLSN 477
Score = 133 (51.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 48/168 (28%), Positives = 80/168 (47%)
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
I E++L+ N I+++ GA L R+D+S N++ I+PD F GL SL L + N +T
Sbjct: 123 IVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 182
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQC 291
+ + L +L+ L ++ N + L + F L L L N ++ I+ L Q
Sbjct: 183 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQA 242
Query: 292 QIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
TL +L NP +CD +R + D ++ +N + G P
Sbjct: 243 I-----QTL--HLAQNPFVCDCHLRWLADYLQ--DNPIETSGARCSSP 281
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 78/300 (26%), Positives = 131/300 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP----SDIQLFSQLGSLY 55
GL L L L N++ + +G L LQLL++ N++ L D+Q S L SLY
Sbjct: 167 GLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLL-SLY 225
Query: 56 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N + S GL L +Q ++ N D +L L LQ+N I + +
Sbjct: 226 DNKLQTIS-KGLFAPLQAIQTLHLAQNPFVC---D--CHLRWLADY-LQDNPIETSGARC 278
Query: 116 SGLTKLAYLYLSHNQLTEFLL---DDIRGLKRLRT-VDLSY-NKINKFGTRNEGKNQ-VQ 169
S +LA +S + +F +D R +DL ++ GT + NQ +
Sbjct: 279 SSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLA 338
Query: 170 GVTN-----IFELKLQHNEIENLD--GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLK 222
+ + + +L+L NEI L+ G + L +++LS+N+++ + F G S++
Sbjct: 339 RIPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQ 398
Query: 223 MLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L ++ N L T + L L+ L + N ++ + D F GL + L N I I
Sbjct: 399 ELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTI 458
Score = 87 (35.7 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 32/116 (27%), Positives = 53/116 (45%)
Query: 173 NIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
N+ ++ L +N I+ + +GA G + L L+ N+L T F GL LK L + NL+
Sbjct: 372 NLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLI 431
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLA 286
+ + + L ++ L + N +T + F L L +L N N LA
Sbjct: 432 SCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNC-NCHLA 486
Score = 81 (33.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + LS L LS+N+LR I F GL SL++L + N ++++
Sbjct: 594 IDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVP 653
Query: 236 ETSKTFLPALEELFV 250
E S L +L L +
Sbjct: 654 EGSFNDLTSLSHLLL 668
Score = 73 (30.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 27/110 (24%), Positives = 52/110 (47%)
Query: 162 NEGKNQV-QGVT-NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
N G + +G+ ++ EL L+ N + + L L+ +DLS+N + ++ F +
Sbjct: 554 NRGLRALPKGIPKDVTELYLEGNHLTAVPKELSSFRHLTLIDLSNNSIGMLTNYTFSNMS 613
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVL 268
L L +S+N L + S L +L L + N ++ + + F+ L L
Sbjct: 614 HLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSL 663
Score = 48 (22.0 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
EL++ N LT + K+ L DL++N+I
Sbjct: 570 ELYLEGNHLTAVPKELSSFRHLTLIDLSNNSI 601
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L++N ++ L+ + ++RT+ L N +
Sbjct: 2 LNNNNISRILVTSFNHMPKIRTLRLHSNHL 31
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 221 (82.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 86/283 (30%), Positives = 125/283 (44%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
L L LFLN N+L L L T L L+LL + N L LP + + +L L ++N
Sbjct: 145 LVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSN 204
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
R+ SL+ GLL L L + N + + F L +L S++L N++ + S+L
Sbjct: 205 RLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLH 264
Query: 119 T-KLAYLYLSHNQLTEF---LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
+ L +L LS N L E L +I GL+ LR + RN + G+ +
Sbjct: 265 SHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRN-----LTGL-RV 318
Query: 175 FELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
E+ L + A G+ L L LS L ++ GL L+ + + N L L
Sbjct: 319 LEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRAL 378
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
L +LEE+ + HN L L D F LP L L HN
Sbjct: 379 PSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHN 421
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 84/302 (27%), Positives = 136/302 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
+T L L L+++ + ++ G KL+ L + +N++ LPS + L L+ + N
Sbjct: 73 MTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGN 132
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+ SLD L + L LQ ++ NQ+ + F +L NL + L N +T + L G+
Sbjct: 133 ELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGV 192
Query: 119 -TKLAYLYLSHNQLTEF---LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
KL L L N+L LLD +R L L+ L N + R+ + ++
Sbjct: 193 QVKLQKLLLHSNRLASLESGLLDSLRALTELQ---LHTNHL-----RSIVPGAFDRLRSL 244
Query: 175 FELKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
L L N +E L AL + H L+ L LS N L + F + L+ L + L T
Sbjct: 245 SSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRT 304
Query: 234 LEETSKTFLPALEELFVSHNS-LTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQC 291
L + L L L VS + L+ L +D F GL L L+ + ++ L L+ C
Sbjct: 305 LPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGL-LRGLC 363
Query: 292 QI 293
++
Sbjct: 364 RL 365
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 56/189 (29%), Positives = 89/189 (47%)
Query: 97 NLDSISL-QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
NL I L Q + T N+S S +T L L LS + ++ +L+T+ LS NKI
Sbjct: 51 NLTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKI 110
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG--IHGLSRLDLSHNKLRTISPD 213
+ + + + +L L NE+++LD L +H L L L+ N+L +
Sbjct: 111 THLPSA-----LLDNLVLLEQLFLDGNELKSLDQNLFQKLVH-LQELFLNQNQLAFLPAS 164
Query: 214 DFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDF-HGLPVLCKAD 272
F L +LK+LD+S N LT L E L++L + N L L+ L L +
Sbjct: 165 LFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQ 224
Query: 273 LAHNNIKAI 281
L N++++I
Sbjct: 225 LHTNHLRSI 233
>UNIPROTKB|O02678 [details] [associations]
symbol:BGN "Biglycan" species:9615 "Canis lupus familiaris"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0050840 "extracellular matrix binding" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0030133 "transport
vesicle" evidence=IEA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0005539 "glycosaminoglycan
binding" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005578 eggNOG:COG4886 GO:GO:0042383 GO:GO:0030133
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0050840
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 CTD:633 KO:K08118
OrthoDB:EOG4868CN EMBL:U83140 RefSeq:NP_001003229.1
UniGene:Cfa.45046 ProteinModelPortal:O02678 SMR:O02678
STRING:O02678 GeneID:403905 KEGG:cfa:403905 InParanoid:O02678
NextBio:20817397 Uniprot:O02678
Length = 369
Score = 216 (81.1 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 80/255 (31%), Positives = 121/255 (47%)
Query: 76 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 134
+ ++ N I+ +R D+F+ LH+L ++ L NN+I+ ++ + S L KL LY+S N L E
Sbjct: 95 LLDLQNNDISELRADDFKGLHHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI 154
Query: 135 LLDDIRGLKRLRTVDLSYNKINK--F-GTRNEGKNQVQG--VTNI-FE------LKLQHN 182
+ L LR D K+ K F G RN ++ G + N FE LKL +
Sbjct: 155 PPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 214
Query: 183 EIENLDGALMGI-----HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
I + L GI L+ L L HNK++ I +D + L L + HN + +E
Sbjct: 215 RIS--EAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 272
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQI-FGL 296
S +FLP L EL + +N L+R+ L +L L NNI + + C + FG+
Sbjct: 273 SLSFLPTLRELHLDNNKLSRVPSGLPDLKLLQVVYLHTNNITKVGVN----DFCPVGFGV 328
Query: 297 NSTLR--IYLEGNPV 309
I L NPV
Sbjct: 329 KRAYYNGISLFNNPV 343
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L NN++ + E L KLQ L I +N L +P ++ S L L ++N
Sbjct: 113 GLHHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDN 170
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
RI + G+ GL + M N + + F L L+ + + ++T + L
Sbjct: 171 RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP 229
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L+L HN++ L+D+ +L + L +N+I G + + + E
Sbjct: 230 --ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI---ENGS--LSFLPTLRE 282
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L L +N++ + L + L + L N + + +DF
Sbjct: 283 LHLDNNKLSRVPSGLPDLKLLQVVYLHTNNITKVGVNDF 321
>UNIPROTKB|G1K2D8 [details] [associations]
symbol:BGN "Biglycan" species:9615 "Canis lupus familiaris"
[GO:0050840 "extracellular matrix binding" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=IEA] [GO:0030133 "transport vesicle" evidence=IEA]
[GO:0019800 "peptide cross-linking via chondroitin 4-sulfate
glycosaminoglycan" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0005539 "glycosaminoglycan binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042383 GO:GO:0031012
GO:GO:0030133 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0050840 GeneTree:ENSGT00700000104006 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 OMA:IQFGNYK
EMBL:AAEX03027076 Ensembl:ENSCAFT00000030457 Uniprot:G1K2D8
Length = 372
Score = 216 (81.1 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 80/255 (31%), Positives = 121/255 (47%)
Query: 76 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 134
+ ++ N I+ +R D+F+ LH+L ++ L NN+I+ ++ + S L KL LY+S N L E
Sbjct: 98 LLDLQNNDISELRADDFKGLHHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI 157
Query: 135 LLDDIRGLKRLRTVDLSYNKINK--F-GTRNEGKNQVQG--VTNI-FE------LKLQHN 182
+ L LR D K+ K F G RN ++ G + N FE LKL +
Sbjct: 158 PPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 217
Query: 183 EIENLDGALMGI-----HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
I + L GI L+ L L HNK++ I +D + L L + HN + +E
Sbjct: 218 RIS--EAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 275
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQI-FGL 296
S +FLP L EL + +N L+R+ L +L L NNI + + C + FG+
Sbjct: 276 SLSFLPTLRELHLDNNKLSRVPSGLPDLKLLQVVYLHTNNITKVGVN----DFCPVGFGV 331
Query: 297 NSTLR--IYLEGNPV 309
I L NPV
Sbjct: 332 KRAYYNGISLFNNPV 346
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L NN++ + E L KLQ L I +N L +P ++ S L L ++N
Sbjct: 116 GLHHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDN 173
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
RI + G+ GL + M N + + F L L+ + + ++T + L
Sbjct: 174 RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP 232
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L+L HN++ L+D+ +L + L +N+I G + + + E
Sbjct: 233 --ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI---ENGS--LSFLPTLRE 285
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L L +N++ + L + L + L N + + +DF
Sbjct: 286 LHLDNNKLSRVPSGLPDLKLLQVVYLHTNNITKVGVNDF 324
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 223 (83.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 82/300 (27%), Positives = 147/300 (49%)
Query: 25 LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFN 82
L +L+ L ++ NQ+ +L P + S+L LY NN + +L G L L KL++ + N
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 83 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRG 141
+I+ + R F+ L +L + L N + ++ ++ + L L YL+L N++ +
Sbjct: 142 EISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQ 201
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRL 200
L +LR ++LS N++ R+ + ++ L L N +++L + + L L
Sbjct: 202 LGKLRFLNLSANELQP-SLRHAAT--FAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLL 258
Query: 201 DLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK 260
L N+L ++P+ F GL++L+ L + N L+ L L +LE L +S N L+ L
Sbjct: 259 SLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHP 318
Query: 261 DFHG-LPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTL-RIYLEGNPVLCDDSMRAV 318
G L L + L +N + A++ IF + L R+ L+GN CD +R +
Sbjct: 319 ATFGHLGRLRELSLRNNALSALS--------GDIFAASPALYRLDLDGNGWTCDCRLRGL 370
Score = 203 (76.5 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 88/295 (29%), Positives = 136/295 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNN 59
L L L L N+++SL + LS+L+ L + N L+AL P + +L LYAN N
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
I+ L G GL L +D N + + F L NL + L++N+I + ++ +
Sbjct: 142 EISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQ 201
Query: 118 LTKLAYLYLSHNQLTEFLLD--DIRGLKRLRTVDLSYNKINKFGTR------NEGK---- 165
L KL +L LS N+L L L+ L ++ LS N + G R G
Sbjct: 202 LGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLR 261
Query: 166 -NQVQ--------GVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDF 215
NQ+ G+ + EL+L+ N + L AL+ +H L LDLS N+L + P F
Sbjct: 262 GNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATF 321
Query: 216 IGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCK 270
L L+ L + +N L+ L ++F + +L RLD D +G C+
Sbjct: 322 GHLGRLRELSLRNNALSALSG----------DIFAASPALYRLDLDGNGWTCDCR 366
Score = 196 (74.1 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 76/271 (28%), Positives = 123/271 (45%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNN 59
L+ L L+L NN L++L G L L KL++L N++ L + L L + N
Sbjct: 106 LSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGN 165
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMN--SSL 115
+ +L D + L L +++ N+I + ++ F L L ++L N++ S+ ++
Sbjct: 166 ALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHAATF 225
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+ L L+ L LS N L + L RL + L N++ G+ +
Sbjct: 226 APLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPE-----AFWGLEALR 280
Query: 176 ELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
EL+L+ N + L AL+ +H L LDLS N+L + P F L L+ L + +N L+ L
Sbjct: 281 ELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSAL 340
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKDFHGL 265
PAL L + N T D GL
Sbjct: 341 SGDIFAASPALYRLDLDGNGWT-CDCRLRGL 370
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 72/257 (28%), Positives = 112/257 (43%)
Query: 30 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 89
L V+ + P D+ +S LG + N IT+ D L +L+ ++ +NQI +
Sbjct: 46 LRVVPKTSSLPSPHDVLTYS-LGGNFITN--ITAFD--FHRLGQLRRLDLQYNQIRSLHP 100
Query: 90 DEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 148
F+ L L+ + L NN + ++ +L+ L KL LY + N+++ GL+ L +
Sbjct: 101 KTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKL 160
Query: 149 DLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKL 207
L N + G + G N+ L L+ N I L A + L L+LS N+L
Sbjct: 161 RLDGNAL---GALPDAVFAPLG--NLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANEL 215
Query: 208 RTI--SPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+ F L SL L +S N L L LP L L + N LT L + F G
Sbjct: 216 QPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWG 275
Query: 265 LPVLCKADLAHNNIKAI 281
L L + L N + +
Sbjct: 276 LEALRELRLEGNRLSQL 292
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 145 (56.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 39/124 (31%), Positives = 68/124 (54%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DG 66
L N +K++ G KL+ + I +NQ+ + P Q L SL N+IT + G
Sbjct: 314 LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKG 373
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 125
L GL LQ+ ++ N+I +R + FQ+L NL+ +SL +N++ +++ L + L + L+
Sbjct: 374 LFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLH 433
Query: 126 LSHN 129
L+ N
Sbjct: 434 LAQN 437
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L N +T D GLK LR + L N+++ + Q + + L+L N+
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIE-----RGAFQDLKQLERLRLNKNK 120
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L L+RLDLS N+++ I F G+ +K L + +N ++ +E+ + L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 243 PALEELFVSHNSLTR-LDKDFHGLPVLCKADLAHNN 277
LE L +++N+++R L F+ +P + L H+N
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRL-HSN 215
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/168 (26%), Positives = 85/168 (50%)
Query: 69 RGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYL 126
RG+ + + ++D N IT + + +F L NL + L++NQ++ + + L +L L L
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRL 116
Query: 127 SHNQLTEFLLDDI--RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
+ N+L +L ++ + +L +DLS N+I + +G+T++ L+L +N I
Sbjct: 117 NKNKLQ--VLPELLFQSTPKLTRLDLSENQIQGIP-----RKAFRGITDVKNLQLDNNHI 169
Query: 185 ENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ DGA + L L L++N + I F + ++ L + N L
Sbjct: 170 SCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL N + I+ DF GL +L++L + N ++ +E + L LE L ++ N L L
Sbjct: 65 RLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVL 124
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F P L + DL+ N I+ I + A + G+ + L+ N + C D +
Sbjct: 125 PELLFQSTPKLTRLDLSENQIQGIP-RKAFR------GITDVKNLQLDNNHISCIEDGAF 177
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 178 RALRDLEILTLNNN 191
Score = 135 (52.6 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 124 LYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L+ N+++ I + L LR ++LS NKI + EG G ++ EL L N
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEV---REGA--FDGAASVQELMLTGN 591
Query: 183 EIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
++E + G + G+ GL L L N + +S D F GL S+++L + N +TT+ + T
Sbjct: 592 QLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTT 651
Query: 242 LPALEELFVSHN 253
L +L + + N
Sbjct: 652 LVSLSTINLLSN 663
Score = 133 (51.9 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL +L L L +N++ +E G L +L+ L + +N+L+ LP + Q +L L +
Sbjct: 83 GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLS 116
N+I + RG+T ++ +D N I+ + F+ L +L+ ++L NN I+ + +S +
Sbjct: 143 NQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 117 GLTKLAYLYLSHNQL 131
+ K+ L L N L
Sbjct: 203 HMPKIRTLRLHSNHL 217
Score = 132 (51.5 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 38/147 (25%), Positives = 71/147 (48%)
Query: 12 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLL-R 69
NN + + L L++L +E NQ+ + Q QL L N N++ L LL +
Sbjct: 71 NNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSH 128
KL ++ NQI + R F+ + ++ ++ L NN I+ + + + L L L L++
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNN 190
Query: 129 NQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N ++ L+ + ++RT+ L N +
Sbjct: 191 NNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 131 (51.2 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P I ++ L NN RIT +D GL L+V +++ NQ++++ R FQ+L
Sbjct: 52 LRAVPRGIPRNAERLDLDRNNITRITKMD--FAGLKNLRVLHLEDNQVSVIERGAFQDLK 109
Query: 97 NLDSISLQNNQITSMNSSLSGLT-KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N++ + L T KL L LS NQ+ RG+ ++ + L N I
Sbjct: 110 QLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHI 169
Query: 156 N 156
+
Sbjct: 170 S 170
Score = 126 (49.4 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
I E++L+ N I+ + GA L R+D+S N++ I+PD F GL SL L + N +T
Sbjct: 309 IVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQC 291
+ + L +L+ L ++ N + L + F L L L N ++ I+ L Q
Sbjct: 369 EIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ- 427
Query: 292 QIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
S ++L NP +CD ++ + D ++ +N + G P
Sbjct: 428 ------SIQTLHLAQNPFVCDCHLKWLADYLQ--DNPIETSGARCSSP 467
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 80/300 (26%), Positives = 130/300 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP----SDIQLFSQLGSLY 55
GL L L L N++ + +G L LQLL++ N++ L D+Q + L SLY
Sbjct: 353 GLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLL-SLY 411
Query: 56 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N + S GL L +Q ++ N D +L L LQ+N I + +
Sbjct: 412 DNKLQTIS-KGLFAPLQSIQTLHLAQNPFVC---D--CHLKWLADY-LQDNPIETSGARC 464
Query: 116 SGLTKLAYLYLSHNQLTEFLL---DDIRGLKRLRT-VDLSY-NKINKFGTRNEGKNQ--V 168
S +LA +S + +F +D R +DL K GT + NQ V
Sbjct: 465 SSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLV 524
Query: 169 QGVTNIFE----LKLQHNEIENLD--GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLK 222
+ +++ E L+L NE+ L+ G + L +++LS+NK++ + F G S++
Sbjct: 525 RIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQ 584
Query: 223 MLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L ++ N L T+ L L+ L + N + + D F GL + L N I I
Sbjct: 585 ELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTI 644
Score = 100 (40.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 38/149 (25%), Positives = 68/149 (45%)
Query: 11 NNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLL 68
+N +L + L ++ L+L E + LEA + L + +NN+I + +G
Sbjct: 519 SNQKLVRIPSHLPEYVTDLRLNDNEVSVLEAT-GIFKKLPNLRKINLSNNKIKEVREGAF 577
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLS 127
G +Q + NQ+ V F+ L L ++ L++N I + N + +GL+ + L L
Sbjct: 578 DGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLY 637
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
N++T L L T++L N N
Sbjct: 638 DNRITTITPGAFTTLVSLSTINLLSNPFN 666
Score = 99 (39.9 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 79 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLD 137
++ N I + F L I + NQI+ + + GL L L L N++TE +
Sbjct: 314 LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKG 373
Query: 138 DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHG 196
GL L+ + L+ NKIN N Q + N+ L L N+++ + L +
Sbjct: 374 LFDGLVSLQLLLLNANKINCLRV-----NTFQDLQNLNLLSLYDNKLQTISKGLFAPLQS 428
Query: 197 LSRLDLSHN 205
+ L L+ N
Sbjct: 429 IQTLHLAQN 437
Score = 94 (38.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 2 LTDLNWLFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANN 58
+TDL LN+N + LE G L L+ + + N++ E + + L
Sbjct: 534 VTDLR---LNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTG 590
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N++ ++ G + RGL+ L+ + N I V D F L ++ +SL +N+IT++ + +
Sbjct: 591 NQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFT 650
Query: 117 GLTKLAYLYLSHN 129
L L+ + L N
Sbjct: 651 TLVSLSTINLLSN 663
Score = 88 (36.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 173 NIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
N+ ++ L +N+I+ + +GA G + L L+ N+L T+ F GL LK L + NL+
Sbjct: 558 NLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLI 617
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLA 286
+ + L ++ L + N +T + F L L +L N N LA
Sbjct: 618 GCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNC-NCHLA 672
Score = 87 (35.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 167 QVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLD 225
++ + ++ + L +N I L + LS L LS+N+LR I F GL SL++L
Sbjct: 770 ELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLT 829
Query: 226 ISHNLLTTLEETSKTFLPALEELFVSHNSL 255
+ N ++++ E S L +L L + N L
Sbjct: 830 LHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 80 (33.2 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 32/121 (26%), Positives = 56/121 (46%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N L + P + L L ++D+S+N ++ L + + + L L +S+N L
Sbjct: 754 VTELYLEGNHLTAV-PRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR 812
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ F+GL L L N+I ++ + L S + L NP+ CD S+
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSV-------PEGSFNDLTSLSHLALGTNPLHCDCSL 865
Query: 316 R 316
R
Sbjct: 866 R 866
Score = 76 (31.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
G+ + L N ++ I F LK +DIS N ++ + + L +L L + N +
Sbjct: 308 GIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 256 TRLDKD-FHGLPVLCKADLAHNNIKAINI 283
T + K F GL L L N I + +
Sbjct: 368 TEIVKGLFDGLVSLQLLLLNANKINCLRV 396
Score = 75 (31.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
++ EL L+ N + + L + L+ +DLS+N + ++ F + L L +S+N L
Sbjct: 753 DVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR 812
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHN 276
+ + L +L L + N ++ + + F+ L L L N
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 145 (56.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 39/124 (31%), Positives = 68/124 (54%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DG 66
L N +K++ G KL+ + I +NQ+ + P Q L SL N+IT + G
Sbjct: 314 LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKG 373
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 125
L GL LQ+ ++ N+I +R + FQ+L NL+ +SL +N++ +++ L + L + L+
Sbjct: 374 LFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLH 433
Query: 126 LSHN 129
L+ N
Sbjct: 434 LAQN 437
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L N +T D GLK LR + L N+++ + Q + + L+L N+
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIE-----RGAFQDLKQLERLRLNKNK 120
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L L+RLDLS N+++ I F G+ +K L + +N ++ +E+ + L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 243 PALEELFVSHNSLTR-LDKDFHGLPVLCKADLAHNN 277
LE L +++N+++R L F+ +P + L H+N
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRL-HSN 215
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 44/168 (26%), Positives = 85/168 (50%)
Query: 69 RGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYL 126
RG+ + + ++D N IT + + +F L NL + L++NQ++ + + L +L L L
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRL 116
Query: 127 SHNQLTEFLLDDI--RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
+ N+L +L ++ + +L +DLS N+I + +G+T++ L+L +N I
Sbjct: 117 NKNKLQ--VLPELLFQSTPKLTRLDLSENQIQGIP-----RKAFRGITDVKNLQLDNNHI 169
Query: 185 ENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ DGA + L L L++N + I F + ++ L + N L
Sbjct: 170 SCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL N + I+ DF GL +L++L + N ++ +E + L LE L ++ N L L
Sbjct: 65 RLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVL 124
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F P L + DL+ N I+ I + A + G+ + L+ N + C D +
Sbjct: 125 PELLFQSTPKLTRLDLSENQIQGIP-RKAFR------GITDVKNLQLDNNHISCIEDGAF 177
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 178 RALRDLEILTLNNN 191
Score = 135 (52.6 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 124 LYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L+ N+++ I + L LR ++LS NKI + EG G ++ EL L N
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEV---REGA--FDGAASVQELMLTGN 591
Query: 183 EIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
++E + G + G+ GL L L N + +S D F GL S+++L + N +TT+ + T
Sbjct: 592 QLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTT 651
Query: 242 LPALEELFVSHN 253
L +L + + N
Sbjct: 652 LVSLSTINLLSN 663
Score = 133 (51.9 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL +L L L +N++ +E G L +L+ L + +N+L+ LP + Q +L L +
Sbjct: 83 GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLS 116
N+I + RG+T ++ +D N I+ + F+ L +L+ ++L NN I+ + +S +
Sbjct: 143 NQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 117 GLTKLAYLYLSHNQL 131
+ K+ L L N L
Sbjct: 203 HMPKIRTLRLHSNHL 217
Score = 132 (51.5 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 38/147 (25%), Positives = 71/147 (48%)
Query: 12 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLL-R 69
NN + + L L++L +E NQ+ + Q QL L N N++ L LL +
Sbjct: 71 NNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSH 128
KL ++ NQI + R F+ + ++ ++ L NN I+ + + + L L L L++
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNN 190
Query: 129 NQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N ++ L+ + ++RT+ L N +
Sbjct: 191 NNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 131 (51.2 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P I ++ L NN RIT +D GL L+V +++ NQ++++ R FQ+L
Sbjct: 52 LRAVPRGIPRNAERLDLDRNNITRITKMD--FAGLKNLRVLHLEDNQVSVIERGAFQDLK 109
Query: 97 NLDSISLQNNQITSMNSSLSGLT-KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N++ + L T KL L LS NQ+ RG+ ++ + L N I
Sbjct: 110 QLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHI 169
Query: 156 N 156
+
Sbjct: 170 S 170
Score = 126 (49.4 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
I E++L+ N I+ + GA L R+D+S N++ I+PD F GL SL L + N +T
Sbjct: 309 IVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQC 291
+ + L +L+ L ++ N + L + F L L L N ++ I+ L Q
Sbjct: 369 EIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ- 427
Query: 292 QIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
S ++L NP +CD ++ + D ++ +N + G P
Sbjct: 428 ------SIQTLHLAQNPFVCDCHLKWLADYLQ--DNPIETSGARCSSP 467
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 80/300 (26%), Positives = 130/300 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP----SDIQLFSQLGSLY 55
GL L L L N++ + +G L LQLL++ N++ L D+Q + L SLY
Sbjct: 353 GLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLL-SLY 411
Query: 56 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N + S GL L +Q ++ N D +L L LQ+N I + +
Sbjct: 412 DNKLQTIS-KGLFAPLQSIQTLHLAQNPFVC---D--CHLKWLADY-LQDNPIETSGARC 464
Query: 116 SGLTKLAYLYLSHNQLTEFLL---DDIRGLKRLRT-VDLSY-NKINKFGTRNEGKNQ--V 168
S +LA +S + +F +D R +DL K GT + NQ V
Sbjct: 465 SSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLV 524
Query: 169 QGVTNIFE----LKLQHNEIENLD--GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLK 222
+ +++ E L+L NE+ L+ G + L +++LS+NK++ + F G S++
Sbjct: 525 RIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQ 584
Query: 223 MLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L ++ N L T+ L L+ L + N + + D F GL + L N I I
Sbjct: 585 ELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTI 644
Score = 100 (40.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 38/149 (25%), Positives = 68/149 (45%)
Query: 11 NNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLL 68
+N +L + L ++ L+L E + LEA + L + +NN+I + +G
Sbjct: 519 SNQKLVRIPSHLPEYVTDLRLNDNEVSVLEAT-GIFKKLPNLRKINLSNNKIKEVREGAF 577
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLS 127
G +Q + NQ+ V F+ L L ++ L++N I + N + +GL+ + L L
Sbjct: 578 DGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLY 637
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
N++T L L T++L N N
Sbjct: 638 DNRITTITPGAFTTLVSLSTINLLSNPFN 666
Score = 99 (39.9 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 79 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLD 137
++ N I + F L I + NQI+ + + GL L L L N++TE +
Sbjct: 314 LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKG 373
Query: 138 DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHG 196
GL L+ + L+ NKIN N Q + N+ L L N+++ + L +
Sbjct: 374 LFDGLVSLQLLLLNANKINCLRV-----NTFQDLQNLNLLSLYDNKLQTISKGLFAPLQS 428
Query: 197 LSRLDLSHN 205
+ L L+ N
Sbjct: 429 IQTLHLAQN 437
Score = 94 (38.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 2 LTDLNWLFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANN 58
+TDL LN+N + LE G L L+ + + N++ E + + L
Sbjct: 534 VTDLR---LNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTG 590
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N++ ++ G + RGL+ L+ + N I V D F L ++ +SL +N+IT++ + +
Sbjct: 591 NQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFT 650
Query: 117 GLTKLAYLYLSHN 129
L L+ + L N
Sbjct: 651 TLVSLSTINLLSN 663
Score = 88 (36.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 173 NIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
N+ ++ L +N+I+ + +GA G + L L+ N+L T+ F GL LK L + NL+
Sbjct: 558 NLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLI 617
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLA 286
+ + L ++ L + N +T + F L L +L N N LA
Sbjct: 618 GCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNC-NCHLA 672
Score = 87 (35.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 167 QVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLD 225
++ + ++ + L +N I L + LS L LS+N+LR I F GL SL++L
Sbjct: 770 ELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLT 829
Query: 226 ISHNLLTTLEETSKTFLPALEELFVSHNSL 255
+ N ++++ E S L +L L + N L
Sbjct: 830 LHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 80 (33.2 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 32/121 (26%), Positives = 56/121 (46%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N L + P + L L ++D+S+N ++ L + + + L L +S+N L
Sbjct: 754 VTELYLEGNHLTAV-PRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR 812
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ F+GL L L N+I ++ + L S + L NP+ CD S+
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSV-------PEGSFNDLTSLSHLALGTNPLHCDCSL 865
Query: 316 R 316
R
Sbjct: 866 R 866
Score = 76 (31.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
G+ + L N ++ I F LK +DIS N ++ + + L +L L + N +
Sbjct: 308 GIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 256 TRLDKD-FHGLPVLCKADLAHNNIKAINI 283
T + K F GL L L N I + +
Sbjct: 368 TEIVKGLFDGLVSLQLLLLNANKINCLRV 396
Score = 75 (31.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
++ EL L+ N + + L + L+ +DLS+N + ++ F + L L +S+N L
Sbjct: 753 DVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR 812
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHN 276
+ + L +L L + N ++ + + F+ L L L N
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 220 (82.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 88/321 (27%), Positives = 139/321 (43%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL L L L++N+L ++ S L+ L + N LE +P L L
Sbjct: 123 GLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGK 182
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
N +T + + + L LQV + N++T + F L NL ++LQ NQI ++ L
Sbjct: 183 NSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFH 242
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L LYLS+N +++ L +L + L N + + G + N+ E
Sbjct: 243 NNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGP-----MPNLRE 297
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N I +L D + L L LS N++ ISP F GL L+ L + N L L+
Sbjct: 298 LWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLD 357
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
L L+ + + +N L +L + F + L L +N ++ N+ L +
Sbjct: 358 GNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLE--NLPLGIFDH---L 412
Query: 295 GLNSTLRIYLEGNPVLCDDSM 315
G LR+Y NP CD +
Sbjct: 413 GKLCELRLY--DNPWRCDSDI 431
Score = 208 (78.3 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 85/292 (29%), Positives = 125/292 (42%)
Query: 3 TDLNW----LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL-YA 56
T L W L + N + L E +S L L IE+N+L + F LGSL Y
Sbjct: 49 TPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGA--FRNLGSLRYL 106
Query: 57 N--NNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-N 112
+ NN++ L GL +GL L+ + NQ+ ++ F NL + L N + + +
Sbjct: 107 SLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPD 166
Query: 113 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVT 172
+ L L L L N LT + L L+ + L N++ G+
Sbjct: 167 GAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPM-----GTFDGLV 221
Query: 173 NIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
N+ EL LQ N+I L G H L RL LS+N + + P F+ L L L + N L
Sbjct: 222 NLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSL 281
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAIN 282
L +P L EL++ N ++ L D F L L L+ N I I+
Sbjct: 282 KELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFIS 333
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 65/232 (28%), Positives = 116/232 (50%)
Query: 74 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLT 132
LQ+ N IT + F N+ L ++ ++ N+++ + + L L YL L++N+L
Sbjct: 58 LQILN---THITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQ 114
Query: 133 EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGAL 191
+ +GL L ++ LS N++ + + + +N+ EL+L N +E + DGA
Sbjct: 115 VLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQ-----CSNLKELQLHGNHLEYIPDGAF 169
Query: 192 MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVS 251
+ GL++L+L N L ISP F L +L++L + N LT + + L L+EL +
Sbjct: 170 DHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQ 229
Query: 252 HNSLTRLDKD-FHGLPVLCKADLAHNNIK----AINIQLALKTQCQIFGLNS 298
N + L FH L + L++N+I ++ +QL + +FG NS
Sbjct: 230 QNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFG-NS 280
>UNIPROTKB|A6NLG9 [details] [associations]
symbol:BGN "Biglycan" species:9606 "Homo sapiens"
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0005539
"glycosaminoglycan binding" evidence=IEA] [GO:0019800 "peptide
cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0044424 "intracellular
part" evidence=IEA] [GO:0050840 "extracellular matrix binding"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042383
GO:GO:0001974 GO:GO:0031012 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0050840 HOGENOM:HOG000261690 HOVERGEN:HBG016052
InterPro:IPR016352 PIRSF:PIRSF002490 EMBL:U82695 GO:GO:0005539
GO:GO:0019800 GO:GO:0044424 UniGene:Hs.821 HGNC:HGNC:1044
ChiTaRS:BGN EMBL:AK094059 IPI:IPI00643384 SMR:A6NLG9 STRING:A6NLG9
Ensembl:ENST00000370204 Uniprot:A6NLG9
Length = 307
Score = 210 (79.0 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 71/226 (31%), Positives = 110/226 (48%)
Query: 76 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 134
+ ++ N I+ +R+D+F+ L +L ++ L NN+I+ ++ + S L KL LY+S N L E
Sbjct: 33 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI 92
Query: 135 LLDDIRGLKRLRTVDLSYNKINK--F-GTRNEGKNQVQG--VTNI-FE------LKLQHN 182
+ L LR D K+ K F G RN ++ G + N FE LKL +
Sbjct: 93 PPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 152
Query: 183 EIENLDGALMGI-----HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
I + L GI L+ L L HNK++ I +D + L L + HN + +E
Sbjct: 153 RIS--EAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 210
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI 283
S +FLP L EL + +N L R+ L +L L NNI + +
Sbjct: 211 SLSFLPTLRELHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGV 256
Score = 140 (54.3 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L NN++ + E L KLQ L I +N L +P ++ S L L ++N
Sbjct: 51 GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDN 108
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
RI + G+ GL + M N + + F L L+ + + ++T + L
Sbjct: 109 RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP 167
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L+L HN++ L+D+ +L + L +N+I G + + + E
Sbjct: 168 --ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI---ENGS--LSFLPTLRE 220
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L L +N++ + L + L + L N + + +DF
Sbjct: 221 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDF 259
>ZFIN|ZDB-GENE-080917-20 [details] [associations]
symbol:mfhas1 "malignant fibrous histiocytoma
amplified sequence 1" species:7955 "Danio rerio" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001806
Pfam:PF00071 PROSITE:PS51450 ZFIN:ZDB-GENE-080917-20 GO:GO:0005525
GO:GO:0007264 InterPro:IPR003591 SMART:SM00369 InterPro:IPR020859
PROSITE:PS51424 GeneTree:ENSGT00690000102098 OMA:FFQRDAS
EMBL:BX511222 EMBL:BX927162 IPI:IPI00998988
ProteinModelPortal:F1QVP4 Ensembl:ENSDART00000114969 Bgee:F1QVP4
Uniprot:F1QVP4
Length = 994
Score = 223 (83.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 87/282 (30%), Positives = 136/282 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLG-TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
+ ++ L L NN L+ L LG TL+KL++L++ +N+ +PS + SQL L ++N
Sbjct: 48 IKEIEVLNLGNNSLQELPEGLGSTLTKLRILILRRNKFAIVPSAVFQLSQLVELDISHNC 107
Query: 61 IT--SLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+ S D LL+GL KL F+ N+I + + L +L+ + + N++ S S
Sbjct: 108 LNHFSEDIDLLKGLKKL-CFS--HNKIQYLP-SQIGTLQSLEELDISFNELHDFPRSFSQ 163
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG-KNQVQGVTNIFE 176
L KL L + HN+L F +I L L +D S NK+ EG + + +I
Sbjct: 164 LRKLRTLDVDHNKLQRFP-SEILALSDLEELDCSGNKL-------EGLPGNIMMLQSIKI 215
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L L + +L + L L L +N L + P F L LKML++S N +
Sbjct: 216 LWLSSTHLLSLPETFCELQNLESLMLDNNFLTRL-PQSFGKLQKLKMLNLSSNSFEDFPQ 274
Query: 237 TSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
L LEEL++S N LT L ++ L L L +N+I
Sbjct: 275 VIIK-LTRLEELYLSRNKLTFLPEEVGQLCNLANLWLDNNSI 315
Score = 220 (82.5 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 74/253 (29%), Positives = 128/253 (50%)
Query: 29 QLLVIEQN-QLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITM 86
QL + +N Q LP DI+ ++ L NN + L +GL LTKL++ + N+ +
Sbjct: 31 QLTLSTKNSQKITLPEDIK---EIEVLNLGNNSLQELPEGLGSTLTKLRILILRRNKFAI 87
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
V FQ L L + + +N + + + L L L SHN++ ++L I L+ L
Sbjct: 88 VPSAVFQ-LSQLVELDISHNCLNHFSEDIDLLKGLKKLCFSHNKI-QYLPSQIGTLQSLE 145
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNK 206
+D+S+N+++ F +Q++ + L + HN+++ ++ + L LD S NK
Sbjct: 146 ELDISFNELHDFP---RSFSQLRKLRT---LDVDHNKLQRFPSEILALSDLEELDCSGNK 199
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLP 266
L + P + + L S+K+L +S L +L ET L LE L + +N LTRL + F L
Sbjct: 200 LEGL-PGNIMMLQSIKILWLSSTHLLSLPETFCE-LQNLESLMLDNNFLTRLPQSFGKLQ 257
Query: 267 VLCKADLAHNNIK 279
L +L+ N+ +
Sbjct: 258 KLKMLNLSSNSFE 270
Score = 195 (73.7 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 66/230 (28%), Positives = 107/230 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L ++ N L L KL+ L ++ N+L+ PS+I S L L + N++
Sbjct: 141 LQSLEELDISFNELHDFPRSFSQLRKLRTLDVDHNKLQRFPSEILALSDLEELDCSGNKL 200
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L G + L +++ + + + + F L NL+S+ L NN +T + S L KL
Sbjct: 201 EGLPGNIMMLQSIKILWLSSTHLLSLP-ETFCELQNLESLMLDNNFLTRLPQSFGKLQKL 259
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N +F I+ L RL + LS NK+ F G+ + N+ L L +
Sbjct: 260 KMLNLSSNSFEDFPQVIIK-LTRLEELYLSRNKLT-FLPEEVGQ-----LCNLANLWLDN 312
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
N I L +++ + L L L N++ I PD+F L + + + N L
Sbjct: 313 NSITFLPDSIVELGKLEELVLQGNQI-AILPDNFGKLAKVNIWKVKDNPL 361
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 79/278 (28%), Positives = 123/278 (44%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L L N+ + + LS+L L I N L DI L L L ++N+I
Sbjct: 72 LTKLRILILRRNKFAIVPSAVFQLSQLVELDISHNCLNHFSEDIDLLKGLKKLCFSHNKI 131
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + L L+ ++ FN++ R F L L ++ + +N++ S + L+ L
Sbjct: 132 QYLPSQIGTLQSLEELDISFNELHDFPRS-FSQLRKLRTLDVDHNKLQRFPSEILALSDL 190
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L S N+L E L +I L+ ++ + LS + E ++Q N+ L L +
Sbjct: 191 EELDCSGNKL-EGLPGNIMMLQSIKILWLSSTHLLSLP---ETFCELQ---NLESLMLDN 243
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-EETSKT 240
N + L + + L L+LS N P I L L+ L +S N LT L EE +
Sbjct: 244 NFLTRLPQSFGKLQKLKMLNLSSNSFEDF-PQVIIKLTRLEELYLSRNKLTFLPEEVGQ- 301
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
L L L++ +NS+T L L L + L N I
Sbjct: 302 -LCNLANLWLDNNSITFLPDSIVELGKLEELVLQGNQI 338
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L+NN L L G L KL++L + N E P I ++L LY + N++
Sbjct: 233 LQNLESLMLDNNFLTRLPQSFGKLQKLKMLNLSSNSFEDFPQVIIKLTRLEELYLSRNKL 292
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T L + L L +D N IT + D L L+ + LQ NQI + + L K+
Sbjct: 293 TFLPEEVGQLCNLANLWLDNNSITFLP-DSIVELGKLEELVLQGNQIAILPDNFGKLAKV 351
Query: 122 AYLYLSHNQLTE 133
+ N L +
Sbjct: 352 NIWKVKDNPLIQ 363
Score = 139 (54.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 58/207 (28%), Positives = 97/207 (46%)
Query: 94 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG-LKRLRTVDLSY 152
NL L ++S +N+Q ++ + ++ L L +N L E L + + L +LR + L
Sbjct: 28 NLRQL-TLSTKNSQKITLPEDIK---EIEVLNLGNNSLQE-LPEGLGSTLTKLRILIL-- 80
Query: 153 NKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISP 212
+ NKF Q+ + + EL + HN + + + + GL +L SHNK++ + P
Sbjct: 81 -RRNKFAIVPSAVFQL---SQLVELDISHNCLNHFSEDIDLLKGLKKLCFSHNKIQYL-P 135
Query: 213 DDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKAD 272
L SL+ LDIS N L S + L L L V HN L R + L L + D
Sbjct: 136 SQIGTLQSLEELDISFNELHDFPR-SFSQLRKLRTLDVDHNKLQRFPSEILALSDLEELD 194
Query: 273 LAHNNIKAINIQLALKTQCQIFGLNST 299
+ N ++ + + + +I L+ST
Sbjct: 195 CSGNKLEGLPGNIMMLQSIKILWLSST 221
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 52/183 (28%), Positives = 80/183 (43%)
Query: 97 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
NL + L + S L +L + ++T L +DI K + ++L N +
Sbjct: 8 NLKTARLWRDAALRSRKLRSNLRQLTLSTKNSQKIT--LPEDI---KEIEVLNLGNNSLQ 62
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI 216
+ EG +T + L L+ N+ + A+ + L LD+SHN L S D +
Sbjct: 63 ELP---EGLGST--LTKLRILILRRNKFAIVPSAVFQLSQLVELDISHNCLNHFSEDIDL 117
Query: 217 GLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
L LK L SHN + L T L +LEEL +S N L + F L L D+ HN
Sbjct: 118 -LKGLKKLCFSHNKIQYLPSQIGT-LQSLEELDISFNELHDFPRSFSQLRKLRTLDVDHN 175
Query: 277 NIK 279
++
Sbjct: 176 KLQ 178
>ZFIN|ZDB-GENE-050522-29 [details] [associations]
symbol:zgc:113307 "zgc:113307" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-050522-29
eggNOG:COG4886 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HOGENOM:HOG000234447 HOVERGEN:HBG108061 EMBL:BC095895
IPI:IPI00607427 RefSeq:NP_001018560.1 UniGene:Dr.91088
ProteinModelPortal:Q501S3 DNASU:553753 GeneID:553753
KEGG:dre:553753 InParanoid:Q501S3 OrthoDB:EOG4H9XNG
NextBio:20880475 Uniprot:Q501S3
Length = 343
Score = 213 (80.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 77/233 (33%), Positives = 116/233 (49%)
Query: 64 LDGLLRGLT-KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM---NSSLSGLT 119
L+ L GL +LQ + N IT + F N L + L +N++ S N S LT
Sbjct: 62 LNQLPSGLPFRLQYLFLQGNNITSLGSRAFDNTTYLRWLILDHNELLSEQLDNVLFSSLT 121
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
+L L+++HN LT+ GLK+LR L+YN I K +EG Q + ++ + L
Sbjct: 122 RLVNLFINHNNLTKVPAGLPSGLKQLR---LAYNHIEKI---SEG--DFQNLDSLTLILL 173
Query: 180 QHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
Q N ++ ++ G G+ L+ LDLSHN L T P S++ L +S+N LT L E S
Sbjct: 174 QGNRLKTIEEGDFKGLGALNLLDLSHNFLDTF-PKHLP--PSVQQLYLSNNSLTGLSENS 230
Query: 239 KTFLPALEELFVSHNSLT--RLDKDFHGLPVLCKADLAHNNIKAI-NIQLALK 288
L L + HN L RLD L L + DL++N + I ++ + L+
Sbjct: 231 LHAFSGLRYLRLGHNKLRNERLDPGAFNLTSLVELDLSYNRLTEIPSVPITLQ 283
Score = 209 (78.6 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 86/287 (29%), Positives = 137/287 (47%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLG---SLYANNNR 60
L +LFL N + SL + + L+ L+++ N+L + D LFS L +L+ N+N
Sbjct: 73 LQYLFLQGNNITSLGSRAFDNTTYLRWLILDHNELLSEQLDNVLFSSLTRLVNLFINHNN 132
Query: 61 ITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGL 118
+T + GL GL +L+ + +N I + +FQNL +L I LQ N++ ++ GL
Sbjct: 133 LTKVPAGLPSGLKQLR---LAYNHIEKISEGDFQNLDSLTLILLQGNRLKTIEEGDFKGL 189
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L LSHN L F +++L LS N + +N + + + L+
Sbjct: 190 GALNLLDLSHNFLDTFPKHLPPSVQQLY---LSNNSLTGLS-----ENSLHAFSGLRYLR 241
Query: 179 LQHNEIEN--LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L HN++ N LD + L LDLS+N+L I P I L L L+++H ++E
Sbjct: 242 LGHNKLRNERLDPGAFNLTSLVELDLSYNRLTEI-PSVPITLQYL-YLEVNH-----IQE 294
Query: 237 TS-KTFLPALEELFVSHNSLTRLDK---DFHGLP---VLCKADLAHN 276
+ +F + S + RLD ++H LP V C L HN
Sbjct: 295 FNVSSFCRTVGPTSYSRMKILRLDGNKLEYHKLPPDWVFCLRVL-HN 340
Score = 151 (58.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 61/241 (25%), Positives = 112/241 (46%)
Query: 3 TDLNWLFLNNNRLKS--LEGQL-GTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
T L WL L++N L S L+ L +L++L L I N L +P+ + QL Y +
Sbjct: 95 TYLRWLILDHNELLSEQLDNVLFSSLTRLVNLFINHNNLTKVPAGLPSGLKQLRLAYNHI 154
Query: 59 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+I+ +G + L L + + N++ + +F+ L L+ + L +N + + L
Sbjct: 155 EKIS--EGDFQNLDSLTLILLQGNRLKTIEEGDFKGLGALNLLDLSHNFLDTFPKHLP-- 210
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQ-VQGVTNIFEL 177
+ LYLS+N LT + + LR + L +NK+ RNE + +T++ EL
Sbjct: 211 PSVQQLYLSNNSLTGLSENSLHAFSGLRYLRLGHNKL-----RNERLDPGAFNLTSLVEL 265
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNK-------LRTISPDDFIGLDSLKMLDISHNL 230
L +N + + + + L L+++H + RT+ P + +K+L + N
Sbjct: 266 DLSYNRLTEIPSVPITLQYLY-LEVNHIQEFNVSSFCRTVGPTSY---SRMKILRLDGNK 321
Query: 231 L 231
L
Sbjct: 322 L 322
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/162 (30%), Positives = 81/162 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNR 60
LT L LF+N+N L + G S L+ L + N +E + D Q L + NR
Sbjct: 120 LTRLVNLFINHNNLTKVPA--GLPSGLKQLRLAYNHIEKISEGDFQNLDSLTLILLQGNR 177
Query: 61 ITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEF-QNLH-NLDSISLQNNQITSMN-SSLS 116
+ +++ G +GL L + ++ N + D F ++L ++ + L NN +T ++ +SL
Sbjct: 178 LKTIEEGDFKGLGALNLLDLSHNFL-----DTFPKHLPPSVQQLYLSNNSLTGLSENSLH 232
Query: 117 GLTKLAYLYLSHNQLTEFLLDD-IRGLKRLRTVDLSYNKINK 157
+ L YL L HN+L LD L L +DLSYN++ +
Sbjct: 233 AFSGLRYLRLGHNKLRNERLDPGAFNLTSLVELDLSYNRLTE 274
Score = 133 (51.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 44/136 (32%), Positives = 65/136 (47%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L L + L NRLK++E G L L LL + N L+ P + Q LY +NN
Sbjct: 165 LDSLTLILLQGNRLKTIEEGDFKGLGALNLLDLSHNFLDTFPKHLPPSVQ--QLYLSNNS 222
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQ-NLHNLDSISLQNNQITSMNSSLSGL 118
+T L + L + L+ + N++ R D NL +L + L N++T + S +
Sbjct: 223 LTGLSENSLHAFSGLRYLRLGHNKLRNERLDPGAFNLTSLVELDLSYNRLTEIPSV--PI 280
Query: 119 TKLAYLYLSHNQLTEF 134
T L YLYL N + EF
Sbjct: 281 T-LQYLYLEVNHIQEF 295
>UNIPROTKB|P40197 [details] [associations]
symbol:GP5 "Platelet glycoprotein V" species:9606 "Homo
sapiens" [GO:0005518 "collagen binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0010544 "negative
regulation of platelet activation" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0007597 "blood
coagulation, intrinsic pathway" evidence=TAS] [GO:0030168 "platelet
activation" evidence=TAS] Reactome:REACT_604 Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030168 GO:GO:0005887
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007597 GO:GO:0007155 GO:GO:0007160
InterPro:IPR000372 SMART:SM00013 GO:GO:0010544 EMBL:L11238
EMBL:Z23091 IPI:IPI00027410 PIR:A48030 RefSeq:NP_004479.1
UniGene:Hs.73734 ProteinModelPortal:P40197 SMR:P40197 STRING:P40197
PhosphoSite:P40197 DMDM:729616 PaxDb:P40197 PeptideAtlas:P40197
PRIDE:P40197 DNASU:2814 Ensembl:ENST00000323007
Ensembl:ENST00000401815 GeneID:2814 KEGG:hsa:2814 UCSC:uc003ftv.1
CTD:2814 GeneCards:GC03M194115 HGNC:HGNC:4443 MIM:173511
neXtProt:NX_P40197 PharmGKB:PA28823 HOGENOM:HOG000112798
HOVERGEN:HBG005906 InParanoid:P40197 KO:K06260 OMA:AMIKIGQ
OrthoDB:EOG4JHCFD PhylomeDB:P40197 GenomeRNAi:2814 NextBio:11093
PMAP-CutDB:P40197 ArrayExpress:P40197 Bgee:P40197 CleanEx:HS_GP5
Genevestigator:P40197 GermOnline:ENSG00000178732 Uniprot:P40197
Length = 560
Score = 219 (82.2 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 76/258 (29%), Positives = 118/258 (45%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
L +L L L+ N L L +G LG +KL+ L++ N+L +L S + L L + N
Sbjct: 169 LENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRN 228
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG- 117
I S+ G L L + N + + F + HNL ++L N + + L G
Sbjct: 229 HIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGE 288
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+ L L+L+ QL R L RLR + ++ + + +G QG+ + L
Sbjct: 289 MGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSP--RLSALPQGA--FQGLGELQVL 344
Query: 178 KLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L N + L DG L G+ L ++ L N+LR + F L SL+ + + HN L TL
Sbjct: 345 ALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPG 404
Query: 237 TSKTFLPALEELFVSHNS 254
LP L E+ + HNS
Sbjct: 405 DVFGALPRLTEVLLGHNS 422
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 75/289 (25%), Positives = 124/289 (42%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
G+T L L ++++ + ++ G L KL+ L + +N++ LP + L L+ ++
Sbjct: 72 GMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDH 131
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
N + +D + + L LQ ++ NQ+ + F NL NL + L N +T + L G
Sbjct: 132 NALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLG 191
Query: 118 L-TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
KL L L N+L + L L + N I R+ + N+
Sbjct: 192 AQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHI-----RSIAPGAFDRLPNLSS 246
Query: 177 LKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTL 234
L L N + L AL + H L+ L L N L + P G + L+ L ++ L TL
Sbjct: 247 LTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAEL-PGVLFGEMGGLQELWLNRTQLRTL 305
Query: 235 EETSKTFLPALEELFVSHNS-LTRLDKD-FHGLPVLCKADLAHNNIKAI 281
+ L L L V+ + L+ L + F GL L L N + A+
Sbjct: 306 PAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTAL 354
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 50/172 (29%), Positives = 80/172 (46%)
Query: 112 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGV 171
+ S SG+T L L +S + ++ L +L+T+ LS NKI T G + +
Sbjct: 67 SQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKI----THLPGA-LLDKM 121
Query: 172 TNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
+ +L L HN + +D + L L L+ N+L + F L++LK+LD+S N
Sbjct: 122 VLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNN 181
Query: 231 LTTLEETSKTFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIKAI 281
LT L + LE L + N L LD + L L + N+I++I
Sbjct: 182 LTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSI 233
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 168 (64.2 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 46/132 (34%), Positives = 67/132 (50%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD-G 66
L N +K + G KL+ + + NQ+ EA P Q L SL N+IT L G
Sbjct: 200 LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKG 259
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTKLAYLY 125
L GL LQ+ ++ N+I +R D FQ+LHNL+ +SL +N++ T + S L + LY
Sbjct: 260 LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLY 319
Query: 126 LSHNQLTEFLLD 137
H F+ D
Sbjct: 320 ERHLAQNPFICD 331
Score = 135 (52.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 50/170 (29%), Positives = 83/170 (48%)
Query: 164 GKNQVQGVTN----IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
GK + TN I E++L+ N I+ + GA L R+DLS+N++ +PD F GL
Sbjct: 181 GKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGL 240
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT--RLD--KDFHGLPVLCKADLA 274
SL L + N +T L + L +L+ L ++ N + R+D +D H L +L D
Sbjct: 241 RSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-- 298
Query: 275 HNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
N ++ I A T + + + +L NP +CD ++ + D + T
Sbjct: 299 -NKLQTI----AKGTFSPLRAIQTLYERHLAQNPFICDCHLKWLADYLHT 343
Score = 120 (47.3 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 39/149 (26%), Positives = 74/149 (49%)
Query: 11 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLL 68
+N +L + + + +L+L E + LEA + QL + +NN+IT ++ G
Sbjct: 416 SNQKLNKIPDHIPQYTAELRLNNNEFSVLEAT-GIFKKLPQLRKINLSNNKITDIEEGAF 474
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLS 127
G + + + N++ VR F+ L +L ++ L++N+++ + N S +GL+ + L L
Sbjct: 475 DGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLY 534
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
NQ+T L L T++L N N
Sbjct: 535 DNQITTVAPGSFDTLHSLSTLNLLANPFN 563
Score = 117 (46.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 43/138 (31%), Positives = 68/138 (49%)
Query: 94 NL-HNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
NL + I L+ N I + + S KL + LS+NQ++E D +GL+ L ++ L
Sbjct: 190 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLY 249
Query: 152 YNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTI 210
NKI + K +G+ ++ L L N+I L A +H L+ L L NKL+TI
Sbjct: 250 GNKITELP-----KGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 304
Query: 211 SPDDFIGLDSLKMLDISH 228
+ F L +++ L H
Sbjct: 305 AKGTFSPLRAIQTLYERH 322
Score = 110 (43.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 40/153 (26%), Positives = 80/153 (52%)
Query: 57 NNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-S 114
+N ++ + D + + +L++ N +F+ + F+ L L I+L NN+IT + +
Sbjct: 416 SNQKLNKIPDHIPQYTAELRLNNNEFSVLEAT--GIFKKLPQLRKINLSNNKITDIEEGA 473
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
G + + L L+ N+L E + D + +GL+ L+T+ L N+++ G + G+++
Sbjct: 474 FDGASGVNELLLTSNRL-ETVRDKMFKGLESLKTLMLRSNRVSCVGN-----DSFTGLSS 527
Query: 174 IFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
+ L L N+I + G+ +H LS L+L N
Sbjct: 528 VRLLSLYDNQITTVAPGSFDTLHSLSTLNLLAN 560
Score = 108 (43.1 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 40/142 (28%), Positives = 68/142 (47%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T +L N N+F E + + + ++ L +N+I +++ GA G G++ L L+ N
Sbjct: 431 TAELRLNN-NEFSVL-EATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSN 488
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK-DFHG 264
+L T+ F GL+SLK L + N ++ + S T L ++ L + N +T + F
Sbjct: 489 RLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDT 548
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N LA
Sbjct: 549 LHSLSTLNLLANPFNC-NCHLA 569
Score = 107 (42.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN LE G L +L+ + + N++ + S + L +NR+ ++
Sbjct: 434 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 493
Query: 65 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
D + +GL L+ + N+++ V D F L ++ +SL +NQIT++ S L L+
Sbjct: 494 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLS 553
Query: 123 YLYLSHN 129
L L N
Sbjct: 554 TLNLLAN 560
Score = 99 (39.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD--GALMGIHGLSRLDLSH 204
TVD S K+NK + + T EL+L +NE L+ G + L +++LS+
Sbjct: 412 TVDCSNQKLNKI------PDHIPQYTA--ELRLNNNEFSVLEATGIFKKLPQLRKINLSN 463
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FH 263
NK+ I F G + L ++ N L T+ + L +L+ L + N ++ + D F
Sbjct: 464 NKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFT 523
Query: 264 GLPVLCKADLAHNNIKAI 281
GL + L N I +
Sbjct: 524 GLSSVRLLSLYDNQITTV 541
Score = 95 (38.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 27/103 (26%), Positives = 55/103 (53%)
Query: 33 IEQNQLEALPSDIQLFSQLGSLYAN--NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRR 89
++QN LP + ++++L ++ N+I ++ RG ++ +D+NQI+ +
Sbjct: 2 LKQNSSHFLPP-VGVWNELKIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIED 60
Query: 90 DEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQL 131
F+ L +L+ ++L NN IT ++ +S + + KL L N L
Sbjct: 61 GAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 103
Score = 88 (36.0 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + + L L LS+N+LR I F GL SL++L + N ++ +
Sbjct: 678 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVP 737
Query: 236 ETSKTFLPALEELFVSHNSL 255
E + L AL L + N L
Sbjct: 738 EGAFNDLSALSHLAIGANPL 757
Score = 87 (35.7 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N+ T+ P + L ++D+S+N ++TL S + + L L +S+N L
Sbjct: 652 VTELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 710
Query: 257 RLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ + F GL L L N+I + + L++ + + NP+ CD +M
Sbjct: 711 CIPARTFDGLKSLRLLSLHGNDISVV-------PEGAFNDLSALSHLAIGANPLYCDCNM 763
Query: 316 RAVID 320
+ + D
Sbjct: 764 QWLSD 768
Score = 87 (35.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 73 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQL 131
K+++ ++ NQI + R F+ ++ ++ L NQI+ + + + L L L L++N +
Sbjct: 20 KIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI 79
Query: 132 TEFLLDDIRGLKRLRTVDLSYNKI 155
T + + +LRT L N +
Sbjct: 80 TRLSVASFNHMPKLRTFRLHSNNL 103
Score = 87 (35.7 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 98 LDSISLQNNQITSMNSSLSGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
LD++ +N+ + + G+ K + LYL NQ T + ++ K L +DLS N+I+
Sbjct: 630 LDTVVRCSNK--GLKALPKGIPKDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS 686
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDF 215
++ +T + L L +N + + G+ L L L N + + F
Sbjct: 687 TLSNQS-----FSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAF 741
Query: 216 IGLDSLKMLDISHNLL 231
L +L L I N L
Sbjct: 742 NDLSALSHLAIGANPL 757
Score = 84 (34.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 21/84 (25%), Positives = 45/84 (53%)
Query: 27 KLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQI 84
K+++ + +NQ++A+P + + +L + N+I+ + DG R L L+V ++ N I
Sbjct: 20 KIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI 79
Query: 85 TMVRRDEFQNLHNLDSISLQNNQI 108
T + F ++ L + L +N +
Sbjct: 80 TRLSVASFNHMPKLRTFRLHSNNL 103
Score = 82 (33.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 162 NEG-KNQVQGVT-NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
N+G K +G+ ++ EL L N+ + L L+ +DLS+N++ T+S F +
Sbjct: 638 NKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT 697
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
L L +S+N L + + L +L L + N ++ + + F+ L L + N
Sbjct: 698 QLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 755
>DICTYBASE|DDB_G0294094 [details] [associations]
symbol:lrrA "leucine-rich repeat-containing protein
(LRR)" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031589 "cell-substrate adhesion" evidence=IMP] [GO:0031154
"culmination involved in sorocarp development" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030833 "regulation of actin filament
polymerization" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001611
PROSITE:PS51450 dictyBase:DDB_G0294094 GO:GO:0045335 GO:GO:0007163
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GenomeReviews:CM000151_GR EMBL:AAFI02000006 GO:GO:0043326
GO:GO:0016337 GO:GO:0031154 InterPro:IPR025875 Pfam:PF12799
GO:GO:0031589 GO:GO:0030833 GO:GO:0031152 GO:GO:0043327
EMBL:AF200466 RefSeq:XP_628849.1 ProteinModelPortal:Q54AX5
EnsemblProtists:DDB0215361 GeneID:8617996 KEGG:ddi:DDB_G0294094
OMA:TIDNIPS ProtClustDB:CLSZ2728674 Uniprot:Q54AX5
Length = 510
Score = 218 (81.8 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 82/296 (27%), Positives = 142/296 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L +L +++N+L+S + G L LQ+ +N L++LPS+I + +L L +NN++ L
Sbjct: 133 LEYLDISDNQLQSFPLEFGKLYNLQVFNCSKNSLKSLPSEISGWVKLEELNVSNNQLAFL 192
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
+ L L N+ FN++ + +E ++ +L ++ L+ N LS L +L L
Sbjct: 193 PNQICLLGLLSTLNVGFNKLQQLP-EELSSMVSLTNLDLKVNPPLQYVPQLSNLRQLKIL 251
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
+ + Q+T L + L L +D+ N K E + + N+ +L L N +
Sbjct: 252 SIRNLQITHLPLG-LGLLSELIELDIRDNPQLK-----EIPYDIATLINLQKLDLFGNNM 305
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTIS--PDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+ + + L LDL NKL TI P + L +LK L +S+NLL L + +
Sbjct: 306 RIVPREVGNLINLQTLDLRQNKL-TIDNIPSEIGKLVNLKKLLLSNNLLIALPPEIAS-M 363
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNS 298
AL+E S+N L + + L L K +L+ N + +I ++ QI L S
Sbjct: 364 KALKEFEASNNQLQAIPTEIGELSGLTKINLSGNKLTSIPASFGNLSELQICDLKS 419
Score = 208 (78.3 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 74/235 (31%), Positives = 114/235 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN-QLEALPSDIQLFSQLGSL--YANN 58
L L L + N ++ L LG LS+L L I N QL+ +P DI L L + NN
Sbjct: 245 LRQLKILSIRNLQITHLPLGLGLLSELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNN 304
Query: 59 NRITSLDGLLRGLTKLQVFNMDFNQITMVR-RDEFQNLHNLDSISLQNNQITSMNSSLSG 117
RI + + L LQ ++ N++T+ E L NL + L NN + ++ ++
Sbjct: 305 MRIVPRE--VGNLINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIALPPEIAS 362
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+ L S+NQL + + +I L L ++LS NK+ +++Q I +L
Sbjct: 363 MKALKEFEASNNQL-QAIPTEIGELSGLTKINLSGNKLTSIPASFGNLSELQ----ICDL 417
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
K NEI L L G+ +++DLSHN L + P +F L L +LD+ HN LT
Sbjct: 418 K--SNEIAELPTTLDGLKSCTKIDLSHNMLTEL-PWEFGDLIGLTILDVGHNPLT 469
Score = 200 (75.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 71/239 (29%), Positives = 115/239 (48%)
Query: 21 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN-RITSLDGLLRGLTKLQVFNM 79
QL L +L++L I Q+ LP + L S+L L +N ++ + + L LQ ++
Sbjct: 241 QLSNLRQLKILSIRNLQITHLPLGLGLLSELIELDIRDNPQLKEIPYDIATLINLQKLDL 300
Query: 80 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMN--SSLSGLTKLAYLYLSHNQLTEFLLD 137
N + +V R E NL NL ++ L+ N++T N S + L L L LS+N L L
Sbjct: 301 FGNNMRIVPR-EVGNLINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIA-LPP 358
Query: 138 DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGL 197
+I +K L+ + S N++ T ++ G+T I L N++ ++ + + L
Sbjct: 359 EIASMKALKEFEASNNQLQAIPTEI---GELSGLTKI---NLSGNKLTSIPASFGNLSEL 412
Query: 198 SRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
DL N++ + P GL S +D+SHN+LT L + L L V HN LT
Sbjct: 413 QICDLKSNEIAEL-PTTLDGLKSCTKIDLSHNMLTELPWEFGDLI-GLTILDVGHNPLT 469
Score = 185 (70.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 76/310 (24%), Positives = 146/310 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L L++N+L L ++ L+ L I NQL++ P + L + N +
Sbjct: 107 LKNLTRLDLSSNQLDDLPVEISNCEALEYLDISDNQLQSFPLEFGKLYNLQVFNCSKNSL 166
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
SL + G KL+ N+ NQ+ + ++ L L ++++ N++ + LS + L
Sbjct: 167 KSLPSEISGWVKLEELNVSNNQLAFLP-NQICLLGLLSTLNVGFNKLQQLPEELSSMVSL 225
Query: 122 AYLYLSHNQLTEFL--LDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L N +++ L ++R LK L +L + G G ++ + EL +
Sbjct: 226 TNLDLKVNPPLQYVPQLSNLRQLKILSIRNLQITHL-PLGL---GL-----LSELIELDI 276
Query: 180 QHN-EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
+ N +++ + + + L +LDL N +R + P + L +L+ LD+ N LT S
Sbjct: 277 RDNPQLKEIPYDIATLINLQKLDLFGNNMRIV-PREVGNLINLQTLDLRQNKLTIDNIPS 335
Query: 239 KTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
+ L L++L +S+N L L + + L + + ++N ++AI ++ ++ GL
Sbjct: 336 EIGKLVNLKKLLLSNNLLIALPPEIASMKALKEFEASNNQLQAIPTEIG-----ELSGLT 390
Query: 298 STLRIYLEGN 307
+I L GN
Sbjct: 391 ---KINLSGN 397
Score = 182 (69.1 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 73/280 (26%), Positives = 125/280 (44%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-----IT 62
L L+ N L ++ ++G LSK++++ +N++ +P +I + L L+ +NN+ IT
Sbjct: 42 LLLSENDLITIPEEIGKLSKVEIIDFAKNRINYIPPEIGSLATLKQLFLSNNKLFYTPIT 101
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
G L+ LT+L + + + + + E N L+ + + +NQ+ S L L
Sbjct: 102 PNIGALKNLTRLDLSSNQLDDLPV----EISNCEALEYLDISDNQLQSFPLEFGKLYNLQ 157
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
S N L L +I G +L +++S N++ NQ+ + + L + N
Sbjct: 158 VFNCSKNSLKS-LPSEISGWVKLEELNVSNNQLAFL------PNQICLLGLLSTLNVGFN 210
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+++ L L + L+ LDL N P L LK+L I NL T L
Sbjct: 211 KLQQLPEELSSMVSLTNLDLKVNPPLQYVPQ-LSNLRQLKILSI-RNLQITHLPLGLGLL 268
Query: 243 PALEELFVSHN-SLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L EL + N L + D L L K DL NN++ +
Sbjct: 269 SELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRIV 308
Score = 180 (68.4 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 75/277 (27%), Positives = 131/277 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ-LEALPSDIQLFSQLGSLYANNNRITS 63
L+ L + N+L+ L +L ++ L L ++ N L+ +P + QL L N +IT
Sbjct: 202 LSTLNVGFNKLQQLPEELSSMVSLTNLDLKVNPPLQYVPQ-LSNLRQLKILSIRNLQITH 260
Query: 64 LD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
L GLL L +L + D Q+ + D L NL + L N + + + L
Sbjct: 261 LPLGLGLLSELIELDI--RDNPQLKEIPYD-IATLINLQKLDLFGNNMRIVPREVGNLIN 317
Query: 121 LAYLYLSHNQLT-EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L N+LT + + +I L L+ + LS N + ++ + + E +
Sbjct: 318 LQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIALPP------EIASMKALKEFEA 371
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
+N+++ + + + GL++++LS NKL +I P F L L++ D+ N + L T+
Sbjct: 372 SNNQLQAIPTEIGELSGLTKINLSGNKLTSI-PASFGNLSELQICDLKSNEIAELP-TTL 429
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
L + ++ +SHN LT L +F L L D+ HN
Sbjct: 430 DGLKSCTKIDLSHNMLTELPWEFGDLIGLTILDVGHN 466
Score = 179 (68.1 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 60/198 (30%), Positives = 99/198 (50%)
Query: 2 LTDLNWLFLNNNRLK--SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L +L L L N+L ++ ++G L L+ L++ N L ALP +I L A+NN
Sbjct: 315 LINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIALPPEIASMKALKEFEASNN 374
Query: 60 RITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
++ ++ G L GLTK+ N+ N++T + F NL L L++N+I + ++L
Sbjct: 375 QLQAIPTEIGELSGLTKI---NLSGNKLTSIPAS-FGNLSELQICDLKSNEIAELPTTLD 430
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL + LSHN LTE L + L L +D+ +N + T ++G +I +
Sbjct: 431 GLKSCTKIDLSHNMLTE-LPWEFGDLIGLTILDVGHNPL----TIPPNPIVMKGTESIIQ 485
Query: 177 LKLQHNEIENLDGALMGI 194
L+ NE E G + G+
Sbjct: 486 W-LKKNEKEGRKGKVSGL 502
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 80/307 (26%), Positives = 142/307 (46%)
Query: 2 LTDLNWLFLNNNRL--KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
L L LFL+NN+L + +G L L L + NQL+ LP +I L L ++N
Sbjct: 82 LATLKQLFLSNNKLFYTPITPNIGALKNLTRLDLSSNQLDDLPVEISNCEALEYLDISDN 141
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
++ S L LQVFN N + + E L+ +++ NNQ+ + + + L
Sbjct: 142 QLQSFPLEFGKLYNLQVFNCSKNSLKSLP-SEISGWVKLEELNVSNNQLAFLPNQICLLG 200
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L+ L + N+L + L +++ + L +DL N ++ + Q++ + +I L++
Sbjct: 201 LLSTLNVGFNKLQQ-LPEELSSMVSLTNLDLKVNPPLQYVPQLSNLRQLK-ILSIRNLQI 258
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDI-SHNLLTTLEET 237
H L L + L LD+ N +L+ I P D L +L+ LD+ +N+ E
Sbjct: 259 TH-----LPLGLGLLSELIELDIRDNPQLKEI-PYDIATLINLQKLDLFGNNMRIVPREV 312
Query: 238 SKTFLPALEELFVSHNSLT--RLDKDFHGLPVLCKADLAHNNIKAINIQLA-LKTQCQIF 294
L L+ L + N LT + + L L K L++N + A+ ++A +K +
Sbjct: 313 GN--LINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIALPPEIASMKALKEFE 370
Query: 295 GLNSTLR 301
N+ L+
Sbjct: 371 ASNNQLQ 377
Score = 173 (66.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 69/277 (24%), Positives = 126/277 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G L L ++NN+L L Q+ L L L + N+L+ LP ++ L +L N
Sbjct: 175 GWVKLEELNVSNNQLAFLPNQICLLGLLSTLNVGFNKLQQLPEELSSMVSLTNLDLKVNP 234
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-QITSMNSSLSGLT 119
L L +L++ ++ QIT + L L + +++N Q+ + ++ L
Sbjct: 235 PLQYVPQLSNLRQLKILSIRNLQITHLPLG-LGLLSELIELDIRDNPQLKEIPYDIATLI 293
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L N + + ++ L L+T+DL NK+ T + +++ + N+ +L L
Sbjct: 294 NLQKLDLFGNNM-RIVPREVGNLINLQTLDLRQNKL----TIDNIPSEIGKLVNLKKLLL 348
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
+N + L + + L + S+N+L+ I P + L L +++S N LT++ +
Sbjct: 349 SNNLLIALPPEIASMKALKEFEASNNQLQAI-PTEIGELSGLTKINLSGNKLTSIPASFG 407
Query: 240 TFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
L L+ + N + L GL K DL+HN
Sbjct: 408 N-LSELQICDLKSNEIAELPTTLDGLKSCTKIDLSHN 443
>DICTYBASE|DDB_G0289613 [details] [associations]
symbol:gefAA "Ras guanine nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000651 InterPro:IPR001895
InterPro:IPR008937 InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618
PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50212 PROSITE:PS51450
SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0289613 GO:GO:0007264
eggNOG:COG4886 GO:GO:0051056 GenomeReviews:CM000154_GR
GO:GO:0005622 GO:GO:0005085 InterPro:IPR025875 Pfam:PF12799
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 EMBL:AAFI02000147 RefSeq:XP_636129.1
ProteinModelPortal:Q54H95 EnsemblProtists:DDB0233551 GeneID:8627232
KEGG:ddi:DDB_G0289613 InParanoid:Q54H95 OMA:RIQERVI Uniprot:Q54H95
Length = 1371
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 79/311 (25%), Positives = 141/311 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L+DL + N + + L K+ L + +N L+ +P ++ F L +L +N +
Sbjct: 84 LSDLEDFQADGNNISRIGKVFFELKKITDLSLSRNHLKEIPHEMADFKTLKTLQLESNNL 143
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T+L GL+ ++ L+ N+ NQI + D F +L +++L N++T + L+ L
Sbjct: 144 TALPGLISQMSSLKTLNVGQNQIEYIFND-FSLSPSLTALTLFANRLTVLPDLFGRLSTL 202
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+ L L N LT L D LK L T+ L N F + G T++ EL +
Sbjct: 203 SNLNLRSNHLTS-LPDSFSQLKSLTTLSLWDNGFQDFPLA------LCGCTSLTELSFSN 255
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++++ + + L + L +N++ + P + L +L L + HN LT +
Sbjct: 256 NSLQSIPKEIKNLKNLRKFYLQYNQIEQL-PMEMCYLVNLNHLLLHHNRLTMIPCQLAVL 314
Query: 242 LPALEELFVSHNSLTR--LDKDFHGLPVLCKADL-AHNNIKAINIQLALKTQCQIFGLNS 298
+L+ + +S N L L D L + ADL ++ A IQ+ K + F +
Sbjct: 315 SKSLDSINLSGNPLPSKILQADQQSLMRILSADLIVRRDVCARTIQIHYKVWKKQFRFRN 374
Query: 299 TLRIYLEGNPV 309
+ +E N V
Sbjct: 375 VVYTLIEHNKV 385
Score = 196 (74.1 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 65/280 (23%), Positives = 129/280 (46%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 67
L LN+N +K + + + L++ I N++ ++P +I L S L A+ N I+ + +
Sbjct: 44 LNLNDNLIKEIPPDIYKIRTLRIFWINNNKINSIPDEIGLLSDLEDFQADGNNISRIGKV 103
Query: 68 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 127
L K+ ++ N + + E + L ++ L++N +T++ +S ++ L L +
Sbjct: 104 FFELKKITDLSLSRNHLKEIPH-EMADFKTLKTLQLESNNLTALPGLISQMSSLKTLNVG 162
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL 187
NQ+ E++ +D L + L N++ G+ ++ + L L+ N + +L
Sbjct: 163 QNQI-EYIFNDFSLSPSLTALTLFANRLTVLPDLF-GR-----LSTLSNLNLRSNHLTSL 215
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ + L+ L L N + P G SL L S+N L ++ + K L L +
Sbjct: 216 PDSFSQLKSLTTLSLWDNGFQDF-PLALCGCTSLTELSFSNNSLQSIPKEIKN-LKNLRK 273
Query: 248 LFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLAL 287
++ +N + +L + L L L HN + I QLA+
Sbjct: 274 FYLQYNQIEQLPMEMCYLVNLNHLLLHHNRLTMIPCQLAV 313
Score = 167 (63.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 59/254 (23%), Positives = 115/254 (45%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L ++NNN++ S+ ++G LS L+ + N + + ++ L + N + +
Sbjct: 64 LRIFWINNNKINSIPDEIGLLSDLEDFQADGNNISRIGKVFFELKKITDLSLSRNHLKEI 123
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
+ L+ ++ N +T + + +L ++++ NQI + + S L L
Sbjct: 124 PHEMADFKTLKTLQLESNNLTALP-GLISQMSSLKTLNVGQNQIEYIFNDFSLSPSLTAL 182
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N+LT +L D+ G RL T+ + N + + +Q++ +T L L N
Sbjct: 183 TLFANRLT--VLPDLFG--RLSTLSNLNLRSNHLTSLPDSFSQLKSLTT---LSLWDNGF 235
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
++ AL G L+ L S+N L++I P + L +L+ + +N + L +L
Sbjct: 236 QDFPLALCGCTSLTELSFSNNSLQSI-PKEIKNLKNLRKFYLQYNQIEQLP-MEMCYLVN 293
Query: 245 LEELFVSHNSLTRL 258
L L + HN LT +
Sbjct: 294 LNHLLLHHNRLTMI 307
Score = 167 (63.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 77/297 (25%), Positives = 129/297 (43%)
Query: 48 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 107
F+ + L N+N I + + + L++F ++ N+I + DE L +L+ N
Sbjct: 38 FTYIVKLNLNDNLIKEIPPDIYKIRTLRIFWINNNKINSIP-DEIGLLSDLEDFQADGNN 96
Query: 108 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI----------NK 157
I+ + L K+ L LS N L E + ++ K L+T+ L N + +
Sbjct: 97 ISRIGKVFFELKKITDLSLSRNHLKE-IPHEMADFKTLKTLQLESNNLTALPGLISQMSS 155
Query: 158 FGTRNEGKNQVQGVTNIFELK-------LQHNEIENLDGALMGIHGLSRLDLSHNKLRTI 210
T N G+NQ++ + N F L L N + L + LS L+L N L ++
Sbjct: 156 LKTLNVGQNQIEYIFNDFSLSPSLTALTLFANRLTVLPDLFGRLSTLSNLNLRSNHLTSL 215
Query: 211 SPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCK 270
PD F L SL L + N + +L EL S+NSL + K+ L L K
Sbjct: 216 -PDSFSQLKSLTTLSLWDNGFQDFP-LALCGCTSLTELSFSNNSLQSIPKEIKNLKNLRK 273
Query: 271 ADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVID-AMETIN 326
L +N I+ + +++ C + LN L L N + AV+ ++++IN
Sbjct: 274 FYLQYNQIEQLPMEM-----CYLVNLNHLL---LHHNRLTMIPCQLAVLSKSLDSIN 322
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 222 (83.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 70/248 (28%), Positives = 121/248 (48%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P + F+QL + NN IT L + + L+ + N ++ + L
Sbjct: 131 LTAVPEGLSAFTQLLDISMNN--ITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLK 188
Query: 97 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L ++LQNNQ+ ++ S ++ GL+ L L L N +T D GL +LR + L N +
Sbjct: 189 ELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSL 248
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD 214
+ + + + + L L N+I ++ D A + L L L +NK++++
Sbjct: 249 TEVPV-----HPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHC 303
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADL 273
F GLD+L+ LD+++N L + K LP+L+EL NS++ + D F G P+L L
Sbjct: 304 FDGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELLFHSNSISVIPDGAFDGNPLLKTIHL 362
Query: 274 AHNNIKAI 281
N + +
Sbjct: 363 YDNPLSFV 370
Score = 203 (76.5 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 82/320 (25%), Positives = 144/320 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
L L L L N++ S+ T LS L +L + N++++L L +L N N
Sbjct: 259 LPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYN 318
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGL 118
+ ++ L L+ N I+++ F L +I L +N ++ + NS+ L
Sbjct: 319 NLGEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNL 378
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
++L L + + + ++ G RL ++ L+ KI+ N Q + L
Sbjct: 379 SELHSLVIRGASMVQ-RFPNLTGTVRLESLTLTGTKISSISN-----NLCQEQKRLRTLD 432
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L +N I++L + G H L + L N++ I D F GL SLK+LD+S NL+ +++ +
Sbjct: 433 LSYNSIKDLP-SFNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRA 491
Query: 239 KTFLPALEELFVSHNSLTRLDKD-FHGLPVL-------CKADLAHN---NIKAINIQLAL 287
L ++ L VS N LT + +GL L K LA N++++++ A
Sbjct: 492 FAKLGSITNLDVSFNELTSFPTEGLNGLNQLKLVGNFKLKEALAAKDFVNLRSLSVPYAY 551
Query: 288 KTQCQIFGLNSTLRIYLEGN 307
+ C +G +S E N
Sbjct: 552 QC-CAFWGCDSYTHSNTEDN 570
Score = 170 (64.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 74/291 (25%), Positives = 123/291 (42%)
Query: 1 GLTDLNWLF-LNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYAN 57
GL+ L ++ N + L E L+ L + N L + P + +L L
Sbjct: 137 GLSAFTQLLDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQ 196
Query: 58 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSL 115
NN++ ++ +RGL+ LQ +D N IT V D F+ L L + L +N +T + L
Sbjct: 197 NNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPL 256
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
S L L L L+ N+++ L L + L NKI G ++ G+ N+
Sbjct: 257 SNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLG-----QHCFDGLDNLE 311
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDD-FIGLDSLKMLDISHNLLTTL 234
L L +N + A+ + L L L H+ ++ PD F G LK + + N L+ +
Sbjct: 312 TLDLNYNNLGEFPQAIKALPSLKEL-LFHSNSISVIPDGAFDGNPLLKTIHLYDNPLSFV 370
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQL 285
++ L L L + S+ + + G L L I +I+ L
Sbjct: 371 GNSAFHNLSELHSLVIRGASMVQRFPNLTGTVRLESLTLTGTKISSISNNL 421
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 218 (81.8 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 88/288 (30%), Positives = 129/288 (44%)
Query: 2 LTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQ--LGSLYANN 58
L +L L LN N+L L L +L KL++L + +N L LP + L +Q L L +
Sbjct: 145 LLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGL-LGAQIKLEKLLLYS 203
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-- 115
NR+ SLD GLL L L ++ N + + F +L NL +++L N + S+ +L
Sbjct: 204 NRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFL 263
Query: 116 --SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
S LT+L +L E L ++ GL+ L + RN Q G+T
Sbjct: 264 HVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTR 323
Query: 174 IFELKLQHNEIENLDGALMGI-HGLSRLDLS--H-NKLRTISPDDFIGLDSLKMLDISHN 229
N + L G+ HGL+ L + H N L + D GL L+ + + HN
Sbjct: 324 --------NPL--LSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHN 373
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
L L T L +L + + HN L L D F LP L + L HN
Sbjct: 374 RLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRVLLGHN 421
Score = 212 (79.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 92/318 (28%), Positives = 137/318 (43%)
Query: 5 LNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNR 60
L LFL++N L+ L+ L L L+ L + QNQL LP++ LFS LG L + N
Sbjct: 124 LEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPAN--LFSSLGKLKVLDLSRNN 181
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGL 118
+T L GLL KL+ + N++ + NL L + L+ N + S+ + L
Sbjct: 182 LTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSL 241
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L+ L LS N L + L + L N + + G+ + + EL
Sbjct: 242 GNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGE-----MAGLRELW 296
Query: 179 LQHNEIENLDGALM-GIHGLSRLDLSHNKLRT-ISPDDFIGLDSLKMLDISHNLLTTLEE 236
L + L A + GL L L+ N L + + P F GL L++L + N L L E
Sbjct: 297 LNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPE 356
Query: 237 TSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFG 295
+ L L ++ + HN L L + F L L L HN +K + +F
Sbjct: 357 DALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTL--------PGDVFA 408
Query: 296 -LNSTLRIYLEGNPVLCD 312
L R+ L NP LCD
Sbjct: 409 ALPQLTRVLLGHNPWLCD 426
Score = 166 (63.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 60/217 (27%), Positives = 102/217 (47%)
Query: 51 LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 109
L L +++ I+++D G L KL+ + N+I+ + R + L+ + L +N +
Sbjct: 76 LQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALR 135
Query: 110 SMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQV 168
++ +L L L L L+ NQL+ + L +L+ +DLS N + G Q+
Sbjct: 136 DLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGA-QI 194
Query: 169 QGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDIS 227
+ + +L L N + +LD G L + L+ L L N LR+I+P F L +L L +S
Sbjct: 195 K----LEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLS 250
Query: 228 HNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHG 264
NLL +L + L L + N L L + G
Sbjct: 251 GNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFG 287
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 51/170 (30%), Positives = 80/170 (47%)
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
S SG+T L L LS + ++ L +L+T+ L+ NKI+ K +
Sbjct: 69 SFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDK-----MVL 123
Query: 174 IFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
+ +L L HN + +LD L + L L L+ N+L + + F L LK+LD+S N LT
Sbjct: 124 LEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLT 183
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIKAI 281
L + LE+L + N L LD L L + L N++++I
Sbjct: 184 HLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSI 233
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 89/323 (27%), Positives = 142/323 (43%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N ++ + G KL+ L + NQ+ L P Q L SL N+IT L
Sbjct: 311 LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS 370
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTKLAYLY 125
L GL LQ+ ++ N+I +R D FQ+LHNL+ +SL +N++ T + S L + ++
Sbjct: 371 LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMH 430
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG--VTNIFELKLQHNE 183
L+ N F+ D LK L L N I G R ++ + I K + +
Sbjct: 431 LAQNP---FICDC--HLKWLADY-LHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSG 484
Query: 184 IENLDGALMG--IHGLS----------RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
E+ L G L+ +D S+ KL I PD + L +++N
Sbjct: 485 TEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKI-PDHIPQYTA--ELRLNNNEF 541
Query: 232 TTLEETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALK 288
T LE T F LP L ++ +S+N +T +++ F G + + L N ++ N+Q +
Sbjct: 542 TVLEATG-IFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLE--NVQHKM- 597
Query: 289 TQCQIFGLNSTLRIYLEGNPVLC 311
GL S + L N + C
Sbjct: 598 ----FKGLESLKTLMLRSNRISC 616
Score = 154 (59.3 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 48/157 (30%), Positives = 78/157 (49%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T D GL+ LR + L NKI+ T G + + L+L N
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRILQLMENKIS---TIERGA--FHDLKELERLRLNRNN 114
Query: 184 IENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L +G L RLDLS N+++ I F G +K L + +N ++ +E+ + L
Sbjct: 115 LQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNI 278
LE L +++N++TRL F+ +P L L NN+
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 136 (52.9 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 51/170 (30%), Positives = 84/170 (49%)
Query: 164 GKNQVQGVTN----IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
GK + TN I E++L+ N I + GA L RLDLS+N++ ++PD F GL
Sbjct: 292 GKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGL 351
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT--RLD--KDFHGLPVLCKADLA 274
SL L + N +T L ++ L +L+ L ++ N + R+D +D H L +L D
Sbjct: 352 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-- 409
Query: 275 HNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
N ++ + A T L + ++L NP +CD ++ + D + T
Sbjct: 410 -NKLQTV----AKGT---FSALRAIQTMHLAQNPFICDCHLKWLADYLHT 451
Score = 135 (52.6 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 39/135 (28%), Positives = 71/135 (52%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
GL L L L N++ ++E G L +L+ L + +N L+ P + L ++L L +
Sbjct: 77 GLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSE 136
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N+I ++ RG ++ +D+NQI+ + F+ L +L+ ++L NN IT ++ +S +
Sbjct: 137 NQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFN 196
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 197 HMPKLRTFRLHSNNL 211
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 44/134 (32%), Positives = 69/134 (51%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL+ N + I+ DF GL L++L + N ++T+E + L LE L ++ N+L
Sbjct: 59 RLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLF 118
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F G L + DL+ N I+AI + A + I L L+ N + C D +
Sbjct: 119 PELLFLGTAKLYRLDLSENQIQAIP-RKAFRGAVDIKNLQ------LDYNQISCIEDGAF 171
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 172 RALRDLEVLTLNNN 185
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 40/161 (24%), Positives = 70/161 (43%)
Query: 97 NLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N + + L N IT + + +GL L L L N+++ LK L + L+ N +
Sbjct: 56 NTERLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNL 115
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDD 214
F + G ++ L L N+I+ + A G + L L +N++ I
Sbjct: 116 QLFP-----ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA 170
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
F L L++L +++N +T L S +P L + N+L
Sbjct: 171 FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 117 (46.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 36/121 (29%), Positives = 56/121 (46%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L +P +I ++ L NN RIT D GL L++ + N+I+ + R F +L
Sbjct: 46 LRIVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRILQLMENKISTIERGAFHDLK 103
Query: 97 NLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N + L G KL L LS NQ+ RG ++ + L YN+I
Sbjct: 104 ELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQI 163
Query: 156 N 156
+
Sbjct: 164 S 164
Score = 102 (41.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 39/142 (27%), Positives = 68/142 (47%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T +L N N+F T E + + + ++ L +N+I +++ GA G G++ + L+ N
Sbjct: 531 TAELRLNN-NEF-TVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSN 588
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHG- 264
+L + F GL+SLK L + N ++ + S T L ++ L + N +T + G
Sbjct: 589 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGT 648
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N LA
Sbjct: 649 LHSLSTLNLLANPFNC-NCHLA 669
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 221 (82.9 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 78/236 (33%), Positives = 109/236 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L+ L L L+NNR++ L L L+ L + NQL P IQ +L L +NN
Sbjct: 206 LSSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPVAIQTLGRLQELGFHNNN 265
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
I ++ + G LQ + N I V R FQ+L L ++SL L G T
Sbjct: 266 IRAIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFQHLPGLHTLSLNGATDIQEFPDLRGTT 325
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ L + L RLR ++LS+N I EG ++G + E+ L
Sbjct: 326 SLESLTLTRAGLQRLPPGMCQQLPRLRVLELSHNLI-------EGLPSLRGCQKLEEIGL 378
Query: 180 QHNEI-ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
QHN I E + L LDLS N +R+I P+ F L SL LD++ N L+ L
Sbjct: 379 QHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVL 434
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 83/284 (29%), Positives = 123/284 (43%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANN 58
GL+ L L L NNRL + + L L LQ L ++ N + +P + + L L+ ++
Sbjct: 109 GLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDD 168
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
N +T + L L LQ + N+I V F NL +L + L NN+I + + S
Sbjct: 169 NALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSFE 228
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L+ NQL EF + I+ L RL+ + N I + N + + ++
Sbjct: 229 GLQNLETLDLNCNQLHEFPVA-IQTLGRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYD 287
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISP-DDFIGLDSLKMLDISHNLLTTL 234
N I+ + A + GL L L N I D G SL+ L ++ L L
Sbjct: 288 -----NPIQFVGRSAFQHLPGLHTLSL--NGATDIQEFPDLRGTTSLESLTLTRAGLQRL 340
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
LP L L +SHN + L G L + L HN I
Sbjct: 341 PPGMCQQLPRLRVLELSHNLIEGLPS-LRGCQKLEEIGLQHNRI 383
Score = 166 (63.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 70/271 (25%), Positives = 119/271 (43%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITS 63
L W+ + L ++ L L+ L + N L L P L L + NR+
Sbjct: 44 LLWVDCSERGLSTVPAGLDPLTAY--LDLSMNSLTELWPGVFHHLRFLEELRLSGNRLAH 101
Query: 64 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKL 121
+ G GL+ L++ + N++ + + L L S+ L N I+ + + S GLT L
Sbjct: 102 IPGQAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLISLVPDRSFEGLTSL 161
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+L+L N LTE + + L+ L+ V L+ N+I + ++++ L L +
Sbjct: 162 RHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDY-----AFWNLSSLVVLHLHN 216
Query: 182 NEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N I +L + G+ L LDL+ N+L P L L+ L +N + + E K
Sbjct: 217 NRIRHLGAHSFEGLQNLETLDLNCNQLHEF-PVAIQTLGRLQELGFHNNNIRAIPE--KA 273
Query: 241 FL--PALEELFVSHNSLTRLDKD-FHGLPVL 268
FL P L+ + N + + + F LP L
Sbjct: 274 FLGNPLLQTIHFYDNPIQFVGRSAFQHLPGL 304
Score = 149 (57.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 61/237 (25%), Positives = 106/237 (44%)
Query: 25 LSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 83
LS L +L + N++ L + + L +L N N++ ++ L +LQ N
Sbjct: 206 LSSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPVAIQTLGRLQELGFHNNN 265
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSH-NQLTEFLLDDIRG 141
I + F L +I +N I + S+ L L L L+ + EF D+RG
Sbjct: 266 IRAIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFQHLPGLHTLSLNGATDIQEF--PDLRG 323
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLD 201
L ++ L+ + G + Q + + L+L HN IE L +L G L +
Sbjct: 324 TTSLESLTLT-----RAGLQRLPPGMCQQLPRLRVLELSHNLIEGLP-SLRGCQKLEEIG 377
Query: 202 LSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
L HN++ + D F L L+ LD+S N + ++ + + L +L +L ++ N L+ L
Sbjct: 378 LQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVL 434
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 63/230 (27%), Positives = 104/230 (45%)
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
N +T L G+ L L+ + N++ + F L +L + LQNN++ + + +L
Sbjct: 73 NSLTELWPGVFHHLRFLEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALW 132
Query: 117 GLTKLAYLYLSHNQLTEFLLDD--IRGLKRLRTVDLSYNKINKFGTRNEGK-NQVQGVTN 173
L L L L N ++ L+ D GL LR + L N + + R +Q VT
Sbjct: 133 ELPGLQSLRLDANLIS--LVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVT- 189
Query: 174 IFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L N I + D A + L L L +N++R + F GL +L+ LD++ N L
Sbjct: 190 -----LALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLH 244
Query: 233 TLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAI 281
+T L L+EL +N++ + +K F G P+L N I+ +
Sbjct: 245 EFPVAIQT-LGRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPIQFV 293
Score = 130 (50.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 63/230 (27%), Positives = 108/230 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL-GSLYANNN 59
GL +L L LN N+L + TL +LQ L N + A+P L + L +++ +N
Sbjct: 229 GLQNLETLDLNCNQLHEFPVAIQTLGRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDN 288
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMNSSL 115
I + + L L ++ N T ++ EF +L +L+S++L + + +
Sbjct: 289 PIQFVGRSAFQHLPGLHTLSL--NGATDIQ--EFPDLRGTTSLESLTLTRAGLQRLPPGM 344
Query: 116 -SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L +L L LSHN L E L +RG ++L + L +N+I + R + ++ T +
Sbjct: 345 CQQLPRLRVLELSHN-LIEGL-PSLRGCQKLEEIGLQHNRI--WEVRADTFREL---TFL 397
Query: 175 FELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKM 223
L L N I ++ A + L +LDL+ N+L + GL LK+
Sbjct: 398 RSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVLPLAGLGGLVHLKL 447
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 216 (81.1 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 75/269 (27%), Positives = 131/269 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GLT L+ ++ N++K++ Q L L L +L + N++ + ++ + L L
Sbjct: 130 GLTQLD---VSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYE 186
Query: 59 NRITSLDG-LLRGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-L 115
N+IT +D RGL ++ N+ N +T + + L L + +Q N+I +++
Sbjct: 187 NKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDF 246
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVT-NI 174
GL L L L+HN +T + L L +++L NKI+ K+ +G+ N+
Sbjct: 247 EGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVID-----KDAFKGLEENL 301
Query: 175 FELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGL-DSLKMLDISHNLLT 232
L+L N+I + AL +H L LDL +N + ++ D F G DSL L++ N +
Sbjct: 302 QYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIK 361
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD 261
L L +LE L + +N L R+ +D
Sbjct: 362 VLPSLLFENLNSLETLNLQNNKLQRIPQD 390
Score = 216 (81.1 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 88/331 (26%), Positives = 157/331 (47%)
Query: 7 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYANNNRITSL 64
+L L +N L L+G + ++ L I + L A+ + L + L L + N++ ++
Sbjct: 85 YLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTV 144
Query: 65 DG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTK-L 121
L+ L L + N++ N+IT++ + F+ L L+ ++L N+IT ++ + GL +
Sbjct: 145 PSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHI 204
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L N LT + L L+ +++ NKI T +EG +G+ ++ L L H
Sbjct: 205 KRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIR---TISEG--DFEGLQSLDSLILAH 259
Query: 182 NEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLD-SLKMLDISHNLLTTLEETSK 239
N I + + + L+ L+L NK+ I D F GL+ +L+ L + N + T+ +
Sbjct: 260 NMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEAL 319
Query: 240 TFLPALEELFVSHNSLTRLDKD-FHGL-PVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L L L + +N++ L +D F G L +L N+IK + L LN
Sbjct: 320 RPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLL-------FENLN 372
Query: 298 STLRIYLEGNPV--LCDDSMRAVIDAMETIN 326
S + L+ N + + D M VID + I+
Sbjct: 373 SLETLNLQNNKLQRIPQDIMEPVIDTLRIID 403
Score = 213 (80.0 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 79/256 (30%), Positives = 126/256 (49%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQL--GTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYAN 57
GL L L L N++ ++ + G ++ L + N L +P + + S L L
Sbjct: 175 GLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQ 234
Query: 58 NNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SL 115
N+I ++ +G GL L + N IT V + F +L L+S+ L+ N+I+ ++ +
Sbjct: 235 ENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAF 294
Query: 116 SGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
GL + L YL L NQ+ + +R L RLR +DL N IN E G +
Sbjct: 295 KGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLA---EDAFTGFGDSLT 351
Query: 175 FELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIG--LDSLKMLDISHNLL 231
F L LQ N+I+ L L ++ L L+L +NKL+ I P D + +D+L+++DI+ N L
Sbjct: 352 F-LNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRI-PQDIMEPVIDTLRIIDITDNPL 409
Query: 232 TTLEETSKTFLPALEE 247
E T+ P L E
Sbjct: 410 NCSCEL--TWFPKLLE 423
Score = 195 (73.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 79/287 (27%), Positives = 136/287 (47%)
Query: 54 LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISLQNNQITSMN 112
L +N + L G + ++ + + + + + +L L + + NQ+ ++
Sbjct: 86 LKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVP 145
Query: 113 S-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGV 171
S +L L L L L+HN++T + GL+ L + L NKI + E ++
Sbjct: 146 SQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDP--EAFRGLED- 202
Query: 172 TNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
+I L L N++ N+ AL + L +L++ NK+RTIS DF GL SL L ++HN+
Sbjct: 203 -HIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNM 261
Query: 231 LTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPV-LCKADLAHNNIKAINIQLALK 288
+TT+ + L L L + N ++ +DKD F GL L L N I I + AL+
Sbjct: 262 ITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSE-ALR 320
Query: 289 TQCQIFGLNSTLRIYLEGN-PVLCDDSMRAVIDAMETIN---NNTKI 331
++ L+ LR N VL +D+ D++ +N N+ K+
Sbjct: 321 PLHRLRHLD--LR---NNNINVLAEDAFTGFGDSLTFLNLQKNDIKV 362
>UNIPROTKB|F1S2B6 [details] [associations]
symbol:BGN "Biglycan" species:9823 "Sus scrofa" [GO:0050840
"extracellular matrix binding" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IEA] [GO:0030133 "transport vesicle" evidence=IEA]
[GO:0019800 "peptide cross-linking via chondroitin 4-sulfate
glycosaminoglycan" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0005539 "glycosaminoglycan binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042383 GO:GO:0031012
GO:GO:0030133 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0050840 GeneTree:ENSGT00700000104006 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 OMA:IQFGNYK
EMBL:FP102397 Ensembl:ENSSSCT00000013956 ArrayExpress:F1S2B6
Uniprot:F1S2B6
Length = 372
Score = 212 (79.7 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 79/255 (30%), Positives = 122/255 (47%)
Query: 76 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 134
+ ++ N I+ +R+D+F+ L +L ++ L NN+I+ +++ + S L KL LY+S N L E
Sbjct: 98 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHAKAFSPLRKLQKLYISKNHLVEI 157
Query: 135 LLDDIRGLKRLRTVDLSYNKINK--F-GTRNEGKNQVQG--VTNI-FE------LKLQHN 182
+ L LR D K+ K F G RN ++ G + N FE LKL +
Sbjct: 158 PPNLPSSLAELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 217
Query: 183 EIENLDGALMGI-----HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
I + L GI L+ L L HNK++ I +D + L L + HN + +E
Sbjct: 218 RIS--EAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 275
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQI-FGL 296
S +FLP L EL + +N L+R+ L +L L NNI + + C + FG+
Sbjct: 276 SLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVN----DFCPVGFGV 331
Query: 297 NSTLR--IYLEGNPV 309
I L NPV
Sbjct: 332 KRAYYNGISLFNNPV 346
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 54/219 (24%), Positives = 96/219 (43%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L NN++ + + L KLQ L I +N L +P ++ S L L ++N
Sbjct: 116 GLQHLYALVLVNNKISKIHAKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLAELRIHDN 173
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
RI + G+ GL + M N + + F L L+ + + ++T + L
Sbjct: 174 RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP 232
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L+L HN++ L+D+ +L + L +N+I G + + + E
Sbjct: 233 --ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI---ENGS--LSFLPTLRE 285
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L L +N++ + L + L + L N + + +DF
Sbjct: 286 LHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDF 324
>UNIPROTKB|Q06828 [details] [associations]
symbol:FMOD "Fibromodulin" species:9606 "Homo sapiens"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0007181 "transforming growth factor beta receptor complex
assembly" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0018146 "keratan
sulfate biosynthetic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0042339
"keratan sulfate metabolic process" evidence=TAS] [GO:0042340
"keratan sulfate catabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR001611 InterPro:IPR027215
PROSITE:PS51450 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0005975
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
EMBL:CH471067 GO:GO:0007181 GO:GO:0042060 GO:GO:0043202
GO:GO:0005796 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0042476 GO:GO:0018146 GO:GO:0042340 CTD:2331
HOGENOM:HOG000234447 HOVERGEN:HBG108061 KO:K08121 OMA:AQYDEDP
OrthoDB:EOG4CJVHR PANTHER:PTHR24371:SF11 EMBL:X72913 EMBL:X75546
EMBL:AK291632 EMBL:AL359837 EMBL:BC035281 IPI:IPI00000860
PIR:S55275 RefSeq:NP_002014.2 UniGene:Hs.519168
ProteinModelPortal:Q06828 SMR:Q06828 IntAct:Q06828 STRING:Q06828
DMDM:223590208 PaxDb:Q06828 PRIDE:Q06828 DNASU:2331
Ensembl:ENST00000354955 GeneID:2331 KEGG:hsa:2331 UCSC:uc001gzr.3
GeneCards:GC01M203311 H-InvDB:HIX0028648 HGNC:HGNC:3774 MIM:600245
neXtProt:NX_Q06828 PharmGKB:PA28190 InParanoid:Q06828
PhylomeDB:Q06828 GenomeRNAi:2331 NextBio:9461 PMAP-CutDB:Q8IV47
ArrayExpress:Q06828 Bgee:Q06828 CleanEx:HS_FMOD
Genevestigator:Q06828 GermOnline:ENSG00000122176 Uniprot:Q06828
Length = 376
Score = 212 (79.7 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 74/265 (27%), Positives = 124/265 (46%)
Query: 49 SQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQN 105
S++ +Y NN+ITS+ +G+ T L + NQIT V R F L +L+ + L +
Sbjct: 105 SRMKYVYFQNNQITSIQEGVFDNATGLLWIALHGNQITSDKVGRKVFSKLRHLERLYLDH 164
Query: 106 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 165
N +T M L L L+L HNQ++ + + GL+ L + L +N+I + G+
Sbjct: 165 NNLTRMPGPLP--RSLRELHLDHNQISRVPNNALEGLENLTALYLQHNEIQEVGS----- 217
Query: 166 NQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLD 225
++G+ ++ L L +N + + L L +L + HN + T+ F G L +
Sbjct: 218 -SMRGLRSLILLDLSYNHLRKVPDGLPS--ALEQLYMEHNNVYTVPDSYFRGAPKLLYVR 274
Query: 226 ISHNLLTTLEETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQ 284
+SHN LT S TF +L EL +S+N L ++ L L L N I +I
Sbjct: 275 LSHNSLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVNTNLENLY---LQGNRINEFSIS 331
Query: 285 LALKTQCQIFGLNSTLRIYLEGNPV 309
+ T + + + L+GN +
Sbjct: 332 -SFCTVVDVVNFSKLQVLRLDGNEI 355
Score = 195 (73.7 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 72/262 (27%), Positives = 130/262 (49%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNR 60
+ +++ NN++ S+ EG + L + + NQ+ + ++FS+L L Y ++N
Sbjct: 107 MKYVYFQNNQITSIQEGVFDNATGLLWIALHGNQITSDKVGRKVFSKLRHLERLYLDHNN 166
Query: 61 ITSLDGLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
+T + G L R L +L ++D NQI+ V + + L NL ++ LQ+N+I + SS+ GL
Sbjct: 167 LTRMPGPLPRSLREL---HLDHNQISRVPNNALEGLENLTALYLQHNEIQEVGSSMRGLR 223
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L LS+N L + + D GL ++ Y + N T + + +G + ++L
Sbjct: 224 SLILLDLSYNHLRK--VPD--GLPS--ALEQLYMEHNNVYTVPD--SYFRGAPKLLYVRL 275
Query: 180 QHNEIEN--LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
HN + N L L LDLS+N+L+ I P + +L+ L + N + E +
Sbjct: 276 SHNSLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVN----TNLENLYLQGNRIN--EFS 329
Query: 238 SKTFLPALEELFVSHNSLTRLD 259
+F ++ + S + RLD
Sbjct: 330 ISSFCTVVDVVNFSKLQVLRLD 351
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/186 (29%), Positives = 91/186 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNR 60
L L L+L++N L + G L L+ L ++ NQ+ +P++ ++ L +LY +N
Sbjct: 154 LRHLERLYLDHNNLTRMPGPLPR--SLRELHLDHNQISRVPNNALEGLENLTALYLQHNE 211
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLT 119
I + +RGL L + ++ +N + V D + L+ + +++N + T +S G
Sbjct: 212 IQEVGSSMRGLRSLILLDLSYNHLRKVP-DGLPSA--LEQLYMEHNNVYTVPDSYFRGAP 268
Query: 120 KLAYLYLSHNQLTEF-LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
KL Y+ LSHN LT L + L +DLSYN++ K N TN+ L
Sbjct: 269 KLLYVRLSHNSLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVN---------TNLENLY 319
Query: 179 LQHNEI 184
LQ N I
Sbjct: 320 LQGNRI 325
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 53/217 (24%), Positives = 95/217 (43%)
Query: 3 TDLNWLFLNNNRLKSLE-GQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L W+ L+ N++ S + G+ L L+ L ++ N L +P + L L+ ++N
Sbjct: 129 TGLLWIALHGNQITSDKVGRKVFSKLRHLERLYLDHNNLTRMPGPLP--RSLRELHLDHN 186
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+I+ + + L GL L + N+I V + L +L + L N + + L
Sbjct: 187 QISRVPNNALEGLENLTALYLQHNEIQEVG-SSMRGLRSLILLDLSYNHLRKVPDGLP-- 243
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+ L LY+ HN + RG +L V LS+N + G + N +++ EL
Sbjct: 244 SALEQLYMEHNNVYTVPDSYFRGAPKLLYVRLSHNSLTNNGLASNTFNS----SSLLELD 299
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L +N+++ + L L L N++ S F
Sbjct: 300 LSYNQLQKIPPVNTN---LENLYLQGNRINEFSISSF 333
Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 44/166 (26%), Positives = 77/166 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL +L L+L +N ++ + + L L LL + N L +P + S L LY +N
Sbjct: 198 GLENLTALYLQHNEIQEVGSSMRGLRSLILLDLSYNHLRKVPDGLP--SALEQLYMEHNN 255
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+ ++ D RG KL + N +T + + F N +L + L NQ+ + ++
Sbjct: 256 VYTVPDSYFRGAPKLLYVRLSHNSLTNNGLASNTF-NSSSLLELDLSYNQLQKI-PPVN- 312
Query: 118 LTKLAYLYLSHNQLTEFLLD------DIRGLKRLRTVDLSYNKINK 157
T L LYL N++ EF + D+ +L+ + L N+I +
Sbjct: 313 -TNLENLYLQGNRINEFSISSFCTVVDVVNFSKLQVLRLDGNEIKR 357
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 216 (81.1 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 73/236 (30%), Positives = 118/236 (50%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD--IQLFSQLGSLYAN 57
G T L WL L++N++ ++ E L KL+ L + N++ LP+ I L + L L +
Sbjct: 84 GFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFIHLIN-LQILDLS 142
Query: 58 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSL 115
N++T+L+ L GL KLQ+ ++ N + F + +L+ + L NN++ S+ +
Sbjct: 143 FNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNNRLRSLARNGF 202
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+GL KL L+L HN LT+ L L L+ + L +NKIN + E K T +
Sbjct: 203 AGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNKINNLTSTMEWK-----WTTLE 257
Query: 176 ELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
+L L NEI L + + L L L +NKL + SL ++ +S NL
Sbjct: 258 KLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNLDSQTMDMWKSLNVIGLSSNL 313
Score = 204 (76.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 74/255 (29%), Positives = 119/255 (46%)
Query: 51 LGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 109
LG L +N I+ L G T+L ++D NQIT V D FQ L+ L ++L +N+IT
Sbjct: 65 LG-LSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRIT 123
Query: 110 SM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQV 168
+ N++ L L L LS NQ+T + GL++L+ + L N + R
Sbjct: 124 KLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVR-----AF 178
Query: 169 QGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDIS 227
++ L L +N + +L G+ L L L HN L I+ F L +L+ L +
Sbjct: 179 WDCRSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQ 238
Query: 228 HNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQ-L 285
N + L T + LE+L ++ N + L + F LP L L +N + ++ Q +
Sbjct: 239 WNKINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNLDSQTM 298
Query: 286 ALKTQCQIFGLNSTL 300
+ + GL+S L
Sbjct: 299 DMWKSLNVIGLSSNL 313
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 42/118 (35%), Positives = 61/118 (51%)
Query: 188 DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
DG G GLS L HN + +S D F G L L + HN +TT+ E + L L++
Sbjct: 58 DGVDKGALGLS---LRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKD 114
Query: 248 LFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQL--ALKTQCQIFGLNS-TLR 301
L +S N +T+L + F L L DL+ N + A+ +L L+ + QI L S +LR
Sbjct: 115 LNLSSNRITKLPNTTFIHLINLQILDLSFNQMTALEPELFHGLR-KLQILHLRSNSLR 171
>MGI|MGI:2177651 [details] [associations]
symbol:Vasn "vasorin" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0071456 "cellular response
to hypoxia" evidence=IMP] [GO:0071461 "cellular response to redox
state" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
SMART:SM00181 MGI:MGI:2177651 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0071461
SUPFAM:SSF49265 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0071456 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 CTD:114990 eggNOG:NOG273568
HOGENOM:HOG000261606 HOVERGEN:HBG084318 OMA:VTQLRPN
OrthoDB:EOG4GTKD4 EMBL:AJ458938 EMBL:AK012169 EMBL:AK083684
EMBL:AK132325 EMBL:BC050274 IPI:IPI00321074 RefSeq:NP_647468.2
UniGene:Mm.482140 ProteinModelPortal:Q9CZT5 SMR:Q9CZT5
PhosphoSite:Q9CZT5 PaxDb:Q9CZT5 PRIDE:Q9CZT5
Ensembl:ENSMUST00000038770 GeneID:246154 KEGG:mmu:246154
UCSC:uc007xzz.2 InParanoid:Q9CZT5 NextBio:387103 Bgee:Q9CZT5
Genevestigator:Q9CZT5 GermOnline:ENSMUSG00000039646 Uniprot:Q9CZT5
Length = 673
Score = 217 (81.4 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 70/250 (28%), Positives = 123/250 (49%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD 65
L++ N + +L+ G L LQLL + QNQ+ +LP I Q L +L N++ +
Sbjct: 58 LYIFENGITTLDVGCFAGLPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEIS 117
Query: 66 G-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
RGL +L+ + N+I ++ F L L + L +N++ + L L +L L
Sbjct: 118 NETFRGLRRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELRVL-PPLH-LPRLLLL 175
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
LSHN + L+ G+ L T ++ ++ G R + + N+ +L + N++
Sbjct: 176 DLSHNSIPA--LE--AGI--LDTANVEALRLAGLGLRQLDEGLFGRLLNLHDLDVSDNQL 229
Query: 185 ENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
E++ + G+ GL+RL L+ N ++ I P+D GL +L+ LD+S+ L L + P
Sbjct: 230 EHMPSVIQGLRGLTRLRLAGNTRIAQIRPEDLAGLTALQELDVSNLSLQALPSDLSSLFP 289
Query: 244 ALEELFVSHN 253
L L + N
Sbjct: 290 RLRLLAAARN 299
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 70/242 (28%), Positives = 110/242 (45%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSLDG-LLRGLTKLQVFNMDFNQITM 86
L I +N + L D+ F+ L L + N+ITSL G + + L L ++ N++
Sbjct: 58 LYIFENGITTL--DVGCFAGLPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHE 115
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
+ + F+ L L+ + L N+I + + L +L L L N+L +L + L RL
Sbjct: 116 ISNETFRGLRRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELR--VLPPLH-LPRL 172
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSH 204
+DLS+N I G + N+ L+L + LD L G + L LD+S
Sbjct: 173 LLLDLSHNSIPAL---EAG---ILDTANVEALRLAGLGLRQLDEGLFGRLLNLHDLDVSD 226
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNL-LTTLEETSKTFLPALEELFVSHNSLTRLDKDFH 263
N+L + P GL L L ++ N + + L AL+EL VS+ SL L D
Sbjct: 227 NQLEHM-PSVIQGLRGLTRLRLAGNTRIAQIRPEDLAGLTALQELDVSNLSLQALPSDLS 285
Query: 264 GL 265
L
Sbjct: 286 SL 287
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 46/156 (29%), Positives = 80/156 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L+L NR++ ++ G L +L L + N+L LP + L +L L ++N
Sbjct: 123 GLRRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELRVLPP-LHL-PRLLLLDLSHN 180
Query: 60 RITSLD-GLL--RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
I +L+ G+L + L++ + Q+ NLH+LD + +NQ+ M S +
Sbjct: 181 SIPALEAGILDTANVEALRLAGLGLRQLDEGLFGRLLNLHDLD---VSDNQLEHMPSVIQ 237
Query: 117 GLTKLAYLYLSHN-QLTEFLLDDIRGLKRLRTVDLS 151
GL L L L+ N ++ + +D+ GL L+ +D+S
Sbjct: 238 GLRGLTRLRLAGNTRIAQIRPEDLAGLTALQELDVS 273
Score = 128 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 170 GVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
G+ + L L N+I +L G + + LS LDL+ NKL IS + F GL L+ L +
Sbjct: 75 GLPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRLERLYLGK 134
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
N + ++ + L L EL + N L R+ H LP L DL+HN+I A+
Sbjct: 135 NRIRHIQPGAFDALDRLLELKLPDNEL-RVLPPLH-LPRLLLLDLSHNSIPAL 185
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 215 (80.7 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 71/251 (28%), Positives = 125/251 (49%)
Query: 31 LVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVR 88
L + N + AL D FSQL L+ ++N+I+++ + +GL KL+ + N+I +
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 89 RDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL ++ L NQ++S++ L GL KL L+L N L + + L
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNK 206
+DLS N++ R+ +N G+ + EL L+HN++ ++ A + + L L L NK
Sbjct: 186 LDLSTNRL-----RSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 240
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGL 265
+ ++ +L+ LD++ N + ++ T +P L+ L + +N L LD K + L
Sbjct: 241 ISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSL 300
Query: 266 PVLCKADLAHN 276
L L+ N
Sbjct: 301 KSLTTVGLSGN 311
Score = 202 (76.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 62/205 (30%), Positives = 98/205 (47%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 140
N IT + RD+F + L + L +NQI+++ + GL KL L LS N++
Sbjct: 71 NHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFT 130
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSR 199
L L+ +DLS+N+++ G+ + L L+ N + + L L
Sbjct: 131 QLINLQNLDLSFNQLSSLHPE-----LFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
LDLS N+LR+++ + F GL L+ L + HN LT + L +L LF+ N ++ L
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 260 KDFHGL-PVLCKADLAHNNIKAINI 283
L K DL N IKAI++
Sbjct: 246 CGMDWTWSTLEKLDLTGNEIKAIDL 270
Score = 200 (75.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 68/234 (29%), Positives = 119/234 (50%)
Query: 3 TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYANNN 59
+ L WL L++N++ ++ E L KL+ L++ N++ LP+ QL + L +L + N
Sbjct: 85 SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLIN-LQNLDLSFN 143
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+++SL L GL KLQ ++ N + + F + +L+ + L N++ S+ + +G
Sbjct: 144 QLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAG 203
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L+L HNQLT+ L L T+ L +NKI+ G + + + +L
Sbjct: 204 LIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTC---GMDWTW--STLEKL 258
Query: 178 KLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L NEI+ +D + + L L + +NKL ++ L SL + +S NL
Sbjct: 259 DLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGLSGNL 312
Score = 198 (74.8 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 68/251 (27%), Positives = 124/251 (49%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L L +N + +LE Q + S+L L ++ NQ+ + D Q +L L ++N+I L
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 66 GL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAY 123
L LQ ++ FNQ++ + + F L L ++ L++N + ++ L L +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L LS N+L + GL +LR + L +N++ K + + ++++ L LQ N+
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR-----LSSLHTLFLQWNK 240
Query: 184 IENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I NL G L +LDL+ N+++ I F + +LK+L + +N L +L+ L
Sbjct: 241 ISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSL 300
Query: 243 PALEELFVSHN 253
+L + +S N
Sbjct: 301 KSLTTVGLSGN 311
Score = 153 (58.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 74/274 (27%), Positives = 130/274 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---AN 57
L +L L L+ N+L SL +L L KLQ L + N L +P ++LF SL +
Sbjct: 132 LINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP--VRLFWDCRSLEFLDLS 189
Query: 58 NNRITSL--DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
NR+ SL +G GL KL+ +++ NQ+T + F L +L ++ LQ N+I+++ +
Sbjct: 190 TNRLRSLARNGFA-GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGM 248
Query: 116 SGL-TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR--NEGKNQVQ-GV 171
+ L L L+ N++ L + L+ + + NK+N ++ N K+ G+
Sbjct: 249 DWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGL 308
Query: 172 T-NIFELKLQHNEIENLDGALMGI--HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
+ N++E + + + G+ G H + L H+ T D LD++ +
Sbjct: 309 SGNLWECSPRVCALASWLGSFQGRWEHSI----LCHSPDHTQGEDI---LDAVHGFQLCW 361
Query: 229 NLLTTLEETSKTFL-PALEELFVSHNSLTRLDKD 261
NL TT+ + T+ P E +S +S DK+
Sbjct: 362 NLSTTVTAMATTYRDPTTEYTKISSSSYHVGDKE 395
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 42/128 (32%), Positives = 65/128 (50%)
Query: 162 NEGKNQVQGVTN--IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
++G + V T+ L L+HN I L+ L+ L L HN++ T+ D F GL
Sbjct: 49 SQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGL 108
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
LK L +S N + L T+ T L L+ L +S N L+ L + F+GL L L N+
Sbjct: 109 YKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNS 168
Query: 278 IKAINIQL 285
++ I ++L
Sbjct: 169 LRTIPVRL 176
>TAIR|locus:2098267 [details] [associations]
symbol:IMK2 "inflorescence meristem receptor-like kinase
2" species:3702 "Arabidopsis thaliana" [GO:0004672 "protein kinase
activity" evidence=IEA;NAS] [GO:0004674 "protein serine/threonine
kinase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM;IDA]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0016020 "membrane" evidence=NAS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0009505 "plant-type cell
wall" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004672 GO:GO:0009505 InterPro:IPR013210
Pfam:PF08263 HSSP:P58822 HOGENOM:HOG000116554 EMBL:AL132968
EMBL:AF372978 EMBL:AY054515 EMBL:BT006350 EMBL:FJ708739
IPI:IPI00530691 PIR:T46070 RefSeq:NP_190742.1 UniGene:At.669
ProteinModelPortal:Q9SCT4 SMR:Q9SCT4 STRING:Q9SCT4 PaxDb:Q9SCT4
PRIDE:Q9SCT4 EnsemblPlants:AT3G51740.1 GeneID:824337
KEGG:ath:AT3G51740 GeneFarm:540 TAIR:At3g51740 InParanoid:Q9SCT4
OMA:HARAPDS PhylomeDB:Q9SCT4 ProtClustDB:CLSN2915461 Uniprot:Q9SCT4
Length = 836
Score = 221 (82.9 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 79/265 (29%), Positives = 129/265 (48%)
Query: 2 LTDLNWLFLNNNRLK-SLEGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNN 59
L L ++L NNRL S+ LG LQ L + NQL A+P + ++ LY N
Sbjct: 141 LKSLRGVYLFNNRLSGSIPVSLGNCPLLQNLDLSSNQLTGAIPPSL---TESTRLYRLNL 197
Query: 60 RITSLDGLL-----RGLTKLQVFNMDFNQITMVRRDEFQN-LHNLDSISLQNNQIT-SMN 112
SL G L R T L ++ N ++ D F N H L +++L +N+ + ++
Sbjct: 198 SFNSLSGPLPVSVARSYT-LTFLDLQHNNLSGSIPDFFVNGSHPLKTLNLDHNRFSGAVP 256
Query: 113 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVT 172
SL + L + +SHNQL+ + + GL L+++D SYN IN GT + ++
Sbjct: 257 VSLCKHSLLEEVSISHNQLSGSIPRECGGLPHLQSLDFSYNSIN--GTIPDS---FSNLS 311
Query: 173 NIFELKLQHNEIEN-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
++ L L+ N ++ + A+ +H L+ L+L NK+ P+ + +K LD+S N
Sbjct: 312 SLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNF 371
Query: 232 TTLEETSKTFLPALEELFVSHNSLT 256
T S L L VS+N+L+
Sbjct: 372 TGPIPLSLVHLAKLSSFNVSYNTLS 396
Score = 178 (67.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 72/254 (28%), Positives = 118/254 (46%)
Query: 90 DEFQNLHNLDSISLQNNQIT-SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 148
++ L +L +SL NN I S+ SL L L +YL +N+L+ + + L+ +
Sbjct: 112 EKIGQLGSLRKLSLHNNVIAGSVPRSLGYLKSLRGVYLFNNRLSGSIPVSLGNCPLLQNL 171
Query: 149 DLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIEN-LDGALMGIHGLSRLDLSHNKL 207
DLS N++ G + T ++ L L N + L ++ + L+ LDL HN L
Sbjct: 172 DLSSNQLT--GAIPPSLTES---TRLYRLNLSFNSLSGPLPVSVARSYTLTFLDLQHNNL 226
Query: 208 RTISPDDFI-GLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT-RLDKDFHGL 265
PD F+ G LK L++ HN + S LEE+ +SHN L+ + ++ GL
Sbjct: 227 SGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSLLEEVSISHNQLSGSIPRECGGL 286
Query: 266 PVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETI 325
P L D ++N+I I + + LN +L+G P+ D++ + + E
Sbjct: 287 PHLQSLDFSYNSING-TIPDSFSNLSSLVSLNLESN-HLKG-PI--PDAIDRLHNLTELN 341
Query: 326 NNNTKIHG---ETI 336
KI+G ETI
Sbjct: 342 LKRNKINGPIPETI 355
Score = 172 (65.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 74/299 (24%), Positives = 131/299 (43%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNNRIT- 62
L W L + + GQLG+L KL L N + ++P + L +Y NNR++
Sbjct: 101 LPWKGLGGTISEKI-GQLGSLRKLSL---HNNVIAGSVPRSLGYLKSLRGVYLFNNRLSG 156
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKL 121
S+ L LQ ++ NQ+T L ++L N ++ + S++ L
Sbjct: 157 SIPVSLGNCPLLQNLDLSSNQLTGAIPPSLTESTRLYRLNLSFNSLSGPLPVSVARSYTL 216
Query: 122 AYLYLSHNQLTEFLLDD-IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
+L L HN L+ + D + G L+T++L +N+ + + K+ + + E+ +
Sbjct: 217 TFLDLQHNNLSGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSL-----LEEVSIS 271
Query: 181 HNEIE-NLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
HN++ ++ G+ L LD S+N + PD F L SL L++ N L +
Sbjct: 272 HNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPDAI 331
Query: 240 TFLPALEELFVSHNSLTR-LDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L L EL + N + + + + + K DL+ NN I L+L ++ N
Sbjct: 332 DRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNFTG-PIPLSLVHLAKLSSFN 389
Score = 39 (18.8 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 272 DLAHNNIKAINIQLALKTQCQI--FGLN 297
++ H N+ A NI L +T I +GL+
Sbjct: 656 NMIHENLTASNILLDEQTNAHIADYGLS 683
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 215 (80.7 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 73/235 (31%), Positives = 118/235 (50%)
Query: 3 TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---ANN 58
+ L WL L++N++ ++ E L KL+ LV+ N++ LP+ FSQL +L +
Sbjct: 90 SQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTT--FSQLLNLQNLDLSF 147
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 116
N+++SL LL GL KLQ ++ N + + F + +L+ + L N++ S+ + +
Sbjct: 148 NQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFA 207
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL KL L+L HNQLT+ L L T+ L +NKI+ G G +
Sbjct: 208 GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTC---GMEWTWGTLE--K 262
Query: 177 LKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L L N+I+ +D + + L L L +NKL T+ L SL + +S NL
Sbjct: 263 LDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSLPSLSTVGLSGNL 317
Score = 213 (80.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 71/251 (28%), Positives = 124/251 (49%)
Query: 31 LVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVR 88
L + N + L D FSQL L+ ++N+I ++ + +GL KL+ + N+I +
Sbjct: 71 LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLP 130
Query: 89 RDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL ++ L NQ++S++ L GL KL L+L N L + + L
Sbjct: 131 NTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 190
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNK 206
+DLS N++ R+ +N G+ + EL L+HN++ ++ A + + L L L NK
Sbjct: 191 LDLSTNRL-----RSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 245
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGL 265
+ ++ +L+ LD++ N + ++ T +P L+ L + +N L+ LD K L
Sbjct: 246 ISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSL 305
Query: 266 PVLCKADLAHN 276
P L L+ N
Sbjct: 306 PSLSTVGLSGN 316
Score = 206 (77.6 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 63/205 (30%), Positives = 99/205 (48%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 140
N IT + RD+F + L + L +NQI ++ S GL KL L LS N++
Sbjct: 76 NFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFS 135
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSR 199
L L+ +DLS+N+++ + G+ + L L+ N + + L L
Sbjct: 136 QLLNLQNLDLSFNQLSSLHPE-----LLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 190
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
LDLS N+LR+++ + F GL L+ L + HN LT + L +L LF+ N ++ L
Sbjct: 191 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 250
Query: 260 KDFHGL-PVLCKADLAHNNIKAINI 283
L K DL N+IKAI++
Sbjct: 251 CGMEWTWGTLEKLDLTGNDIKAIDL 275
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 69/251 (27%), Positives = 123/251 (49%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L L +N + LE Q + S+L L ++ NQ+ + D Q +L L ++N+I L
Sbjct: 71 LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLP 130
Query: 66 GL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAY 123
L LQ ++ FNQ++ + + L L ++ L++N + ++ L L +
Sbjct: 131 NTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 190
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L LS N+L + GL +LR + L +N++ K + + ++++ L LQ N+
Sbjct: 191 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR-----LSSLHTLFLQWNK 245
Query: 184 IENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I NL + G L +LDL+ N ++ I F + +LK L + +N L+TL+ L
Sbjct: 246 ISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSL 305
Query: 243 PALEELFVSHN 253
P+L + +S N
Sbjct: 306 PSLSTVGLSGN 316
Score = 192 (72.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 73/252 (28%), Positives = 117/252 (46%)
Query: 30 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVR 88
L + ++P+ + S LG L +N IT L+ ++L ++D NQI VR
Sbjct: 49 LFYCDSQGFHSVPNTTEKGS-LG-LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVR 106
Query: 89 RDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
D FQ L+ L + L +N+I + N++ S L L L LS NQL+ + + GL++L+T
Sbjct: 107 EDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQT 166
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNK 206
+ L N + R ++ L L N + +L G+ L L L HN+
Sbjct: 167 LHLRSNSLRTIPVR-----LFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQ 221
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGL 265
L I+ F+ L SL L + N ++ L + LE+L ++ N + +D F +
Sbjct: 222 LTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETM 281
Query: 266 PVLCKADLAHNN 277
P L K L NN
Sbjct: 282 PNL-KTLLLDNN 292
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 216 (81.1 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 65/237 (27%), Positives = 119/237 (50%)
Query: 29 QLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITM 86
Q L + N ++ L S+ +QL LY ++N I+S+D +G+ +L+ + N+IT
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
+ F + NL ++ L N++ ++ S GL KL L+L N L + + + L
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSH 204
+DL YN++ R+ +N G+ + EL L+HN+ ++ A + L + L
Sbjct: 184 DFLDLGYNRL-----RSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQW 238
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD 261
N++R++S SL LD+S N + +E + LP L++L + N LT + ++
Sbjct: 239 NRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQE 295
Score = 208 (78.3 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 63/235 (26%), Positives = 119/235 (50%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL L WL+L++N + S+ E + +L+ L++ N++ L + L +L +
Sbjct: 83 GLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSY 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N++ +L +GL KL + ++ N + V FQ+ NLD + L N++ S++ ++ +
Sbjct: 143 NKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFA 202
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL KL L+L HNQ ++ L LR++ L +N+I R+ + +++
Sbjct: 203 GLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRI-----RSVSQGLTWTWSSLHT 257
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L L N+I+ ++ G + L +L+L NKL +S + SL + +S N+
Sbjct: 258 LDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISLISITLSGNM 312
Score = 180 (68.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 54/185 (29%), Positives = 92/185 (49%)
Query: 101 ISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+SL+ N I + S+ +GL +L +LYL HN ++ D +G++RL+ + LS NKI
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDDFIGL 218
+ V N+ L L +N+++ L G+ L L L N L+T+ F
Sbjct: 126 NKT-----FHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDC 180
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNN 277
+L LD+ +N L +L + L L+EL + HN ++++ F L L L N
Sbjct: 181 RNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNR 240
Query: 278 IKAIN 282
I++++
Sbjct: 241 IRSVS 245
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 63/258 (24%), Positives = 126/258 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
G L+ F + +LKS Q L++L L ++ N + ++ D Q +L L ++N
Sbjct: 62 GSQGLSLRFNSIQKLKS--NQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSN 119
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SG 117
+IT L + L+ ++ +N++ ++ ++F+ L L + L++N + ++ +
Sbjct: 120 KITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQD 179
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L +L L +N+L + GL +L+ + L +N+ +K + + + N+ +
Sbjct: 180 CRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPR-----LFNLRSI 234
Query: 178 KLQHNEIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-E 235
LQ N I ++ L L LDLS N ++ I P F L +L+ L++ N LT + +
Sbjct: 235 YLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQ 294
Query: 236 ETSKTFLPALEELFVSHN 253
ET ++ +L + +S N
Sbjct: 295 ETVNAWI-SLISITLSGN 311
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 37/124 (29%), Positives = 65/124 (52%)
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
EN+ G G GLS L N ++ + + F GL+ L L + HN +++++E + +
Sbjct: 57 ENISG---GSQGLS---LRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRR 110
Query: 245 LEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIY 303
L+EL +S N +T L +K FH +P L DL++N ++ + + Q GL + ++
Sbjct: 111 LKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSE-------QFKGLRKLIILH 163
Query: 304 LEGN 307
L N
Sbjct: 164 LRSN 167
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/113 (34%), Positives = 59/113 (52%)
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+ N I+ L G++ L L L HN + ++ D F G+ LK L +S N +T L
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 236 ETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
+KTF +P L L +S+N L L + F GL L L N++K + I++
Sbjct: 126 --NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRV 176
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 216 (81.1 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 65/237 (27%), Positives = 119/237 (50%)
Query: 29 QLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITM 86
Q L + N ++ L S+ +QL LY ++N I+S+D +G+ +L+ + N+IT
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
+ F + NL ++ L N++ ++ S GL KL L+L N L + + + L
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSH 204
+DL YN++ R+ +N G+ + EL L+HN+ ++ A + L + L
Sbjct: 184 DFLDLGYNRL-----RSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQW 238
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD 261
N++R++S SL LD+S N + +E + LP L++L + N LT + ++
Sbjct: 239 NRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQE 295
Score = 208 (78.3 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 63/235 (26%), Positives = 119/235 (50%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL L WL+L++N + S+ E + +L+ L++ N++ L + L +L +
Sbjct: 83 GLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSY 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N++ +L +GL KL + ++ N + V FQ+ NLD + L N++ S++ ++ +
Sbjct: 143 NKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFA 202
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL KL L+L HNQ ++ L LR++ L +N+I R+ + +++
Sbjct: 203 GLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRI-----RSVSQGLTWTWSSLHT 257
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L L N+I+ ++ G + L +L+L NKL +S + SL + +S N+
Sbjct: 258 LDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISLISITLSGNM 312
Score = 180 (68.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 54/185 (29%), Positives = 92/185 (49%)
Query: 101 ISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+SL+ N I + S+ +GL +L +LYL HN ++ D +G++RL+ + LS NKI
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDDFIGL 218
+ V N+ L L +N+++ L G+ L L L N L+T+ F
Sbjct: 126 NKT-----FHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDC 180
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNN 277
+L LD+ +N L +L + L L+EL + HN ++++ F L L L N
Sbjct: 181 RNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNR 240
Query: 278 IKAIN 282
I++++
Sbjct: 241 IRSVS 245
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 63/258 (24%), Positives = 126/258 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
G L+ F + +LKS Q L++L L ++ N + ++ D Q +L L ++N
Sbjct: 62 GSQGLSLRFNSIQKLKS--NQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSN 119
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SG 117
+IT L + L+ ++ +N++ ++ ++F+ L L + L++N + ++ +
Sbjct: 120 KITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQD 179
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L +L L +N+L + GL +L+ + L +N+ +K + + + N+ +
Sbjct: 180 CRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPR-----LFNLRSI 234
Query: 178 KLQHNEIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-E 235
LQ N I ++ L L LDLS N ++ I P F L +L+ L++ N LT + +
Sbjct: 235 YLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQ 294
Query: 236 ETSKTFLPALEELFVSHN 253
ET ++ +L + +S N
Sbjct: 295 ETVNAWI-SLISITLSGN 311
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 37/124 (29%), Positives = 65/124 (52%)
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
EN+ G G GLS L N ++ + + F GL+ L L + HN +++++E + +
Sbjct: 57 ENISG---GSQGLS---LRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRR 110
Query: 245 LEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIY 303
L+EL +S N +T L +K FH +P L DL++N ++ + + Q GL + ++
Sbjct: 111 LKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSE-------QFKGLRKLIILH 163
Query: 304 LEGN 307
L N
Sbjct: 164 LRSN 167
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/113 (34%), Positives = 59/113 (52%)
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+ N I+ L G++ L L L HN + ++ D F G+ LK L +S N +T L
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 236 ETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
+KTF +P L L +S+N L L + F GL L L N++K + I++
Sbjct: 126 --NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRV 176
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 219 (82.2 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 71/248 (28%), Positives = 121/248 (48%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P + F+Q + NN IT L + + L+ + N ++ + L
Sbjct: 48 LTAVPEGLSAFTQALDISMNN--ITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLK 105
Query: 97 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L ++LQNNQ+ ++ S ++ GL+ L L L N +T D GL +LR + L N +
Sbjct: 106 ELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL 165
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD 214
+ + + + + L L N+I ++ D A + L L L +NK+R++S
Sbjct: 166 TEVPV-----HPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHC 220
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADL 273
F GLD+L+ LD+++N L + K LP+L+EL NS++ + D F G P+L L
Sbjct: 221 FDGLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNSISVIPDGAFDGNPLLRTIHL 279
Query: 274 AHNNIKAI 281
N + +
Sbjct: 280 YDNPLSFV 287
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 69/235 (29%), Positives = 111/235 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L+ L L L+NN+++SL L L+ L + N L P I+ L L ++N
Sbjct: 200 LSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNS 259
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
I+ + DG G L+ ++ N ++ V F NL +L S+ ++ + +L+G
Sbjct: 260 ISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTV 319
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ +++ + + K LRT+DLSYN I + N G + E+ L
Sbjct: 320 HLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPSFN-------GCHALEEISL 372
Query: 180 QHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
Q N+I + +G G+ L LDLS N + I F L + LD+S N LT+
Sbjct: 373 QRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTS 427
Score = 212 (79.7 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 78/281 (27%), Positives = 135/281 (48%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L L L N L + + L L +L++L ++ NQL+ +PS+ I+ S L SL + N IT
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 63 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
S+ + GL +L+ +D N +T V NL L +++L N+I+S+ + + + L+
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSS 202
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L+L +N++ GL L T+DL+YN + +F ++ + ++ EL
Sbjct: 203 LVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEF------PQAIKALPSLKELGFH 256
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N I + DGA G L + L N L + F L L L I + + +
Sbjct: 257 SNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ-QFPNL 315
Query: 240 TFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIK 279
T LE L ++ ++ + + +L DL++NNI+
Sbjct: 316 TGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIR 356
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 79/289 (27%), Positives = 132/289 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL +L L L NN+LK++ + + LS LQ L ++ N + ++P D + QL L+ ++
Sbjct: 103 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 162
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LS 116
N +T + L L LQ + N+I+ + F NL +L + L NN+I S++
Sbjct: 163 NSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFD 222
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L++N L EF I+ L L+ + N I+ N + ++++
Sbjct: 223 GLDNLETLDLNYNNLGEFP-QAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYD 281
Query: 177 LKLQ---HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L ++ NL D + I G S + N T+ + + L K+ I +NL
Sbjct: 282 NPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLES-LTLTGTKISSIPNNLC- 339
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+E L L +S+N++ L F+G L + L N I I
Sbjct: 340 --QEQKM-----LRTLDLSYNNIRDLPS-FNGCHALEEISLQRNQIYQI 380
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 75/290 (25%), Positives = 131/290 (45%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN- 58
GL+ L L L+ N + S+ E L +L+ L ++ N L +P + S L +L A
Sbjct: 127 GLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVP--VHPLSNLPTLQALTL 184
Query: 59 --NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N+I+S+ D L+ L V ++ N+I + + F L NL+++ L N + ++
Sbjct: 185 ALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAI 244
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN-I 174
L L L N ++ G LRT+ L N ++ G N + + + + +
Sbjct: 245 KALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVG--NSAFHNLSDLHSLV 302
Query: 175 FELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDS-LKMLDISHNLLTT 233
+ NL G +H L L L+ K+ +I P++ L+ LD+S+N +
Sbjct: 303 IRGASMVQQFPNLTGT---VH-LESLTLTGTKISSI-PNNLCQEQKMLRTLDLSYNNIRD 357
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
L + ALEE+ + N + ++ + F GL L DL+ N I I+
Sbjct: 358 LPSFNGCH--ALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIH 405
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIE-QNQLEALPSDIQLFSQLGSLYANNNRIT 62
L + L +N L + LS L LVI + ++ P+ + L SL +I+
Sbjct: 274 LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPN-LTGTVHLESLTLTGTKIS 332
Query: 63 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK 120
S+ + L + L+ ++ +N I + F H L+ ISLQ NQI + + GL
Sbjct: 333 SIPNNLCQEQKMLRTLDLSYNNIRDL--PSFNGCHALEEISLQRNQIYQIKEGTFQGLIS 390
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQGVTNIFELK 178
L L LS N + E L + +D+S+N++ F T G NQ++ V N F+LK
Sbjct: 391 LRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQLKLVGN-FKLK 448
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 58/231 (25%), Positives = 105/231 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
GL +L L LN N L + L L+ L N + +P L +++ +N
Sbjct: 223 GLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDN 282
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMNSSL 115
++ + + L+ L ++ +MV+ +F NL +L+S++L +I+S+ ++L
Sbjct: 283 PLSFVGNSAFHNLSDLH--SLVIRGASMVQ--QFPNLTGTVHLESLTLTGTKISSIPNNL 338
Query: 116 SGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
K L L LS+N + + L G L + L N+I + EG QG+ ++
Sbjct: 339 CQEQKMLRTLDLSYNNIRD--LPSFNGCHALEEISLQRNQIYQI---KEGT--FQGLISL 391
Query: 175 FELKLQHNEIENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKML 224
L L N I + G ++ LD+S N+L + + GL+ LK++
Sbjct: 392 RILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQLKLV 442
Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
Identities = 54/193 (27%), Positives = 89/193 (46%)
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSH 204
+ +D+S N I + + KN + EL+L N++ + AL G+ L L L +
Sbjct: 60 QALDISMNNITQL-PEDAFKN----FPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQN 114
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFH 263
N+L+T+ + GL +L+ L + N +T++ E S L L L++ NSLT +
Sbjct: 115 NQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLS 174
Query: 264 GLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV--LCDDSMRAVIDA 321
LP L LA N I +I A L+S + ++L N + L +D
Sbjct: 175 NLPTLQALTLALNKISSIP-DFAFTN------LSSLVVLHLHNNKIRSLSQHCFDG-LDN 226
Query: 322 METINNNTKIHGE 334
+ET++ N GE
Sbjct: 227 LETLDLNYNNLGE 239
>MGI|MGI:88158 [details] [associations]
symbol:Bgn "biglycan" species:10090 "Mus musculus" [GO:0005539
"glycosaminoglycan binding" evidence=IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISS] [GO:0019800
"peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0050840 "extracellular
matrix binding" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:88158 GO:GO:0009986 GO:GO:0005578 eggNOG:COG4886
GO:GO:0042383 GO:GO:0001974 GO:GO:0031012 GO:GO:0030133
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0050840
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 GO:GO:0044424 CTD:633
KO:K08118 OrthoDB:EOG4868CN ChiTaRS:BGN EMBL:X53928 EMBL:L20276
EMBL:BC005452 EMBL:BC019502 EMBL:Y11758 IPI:IPI00123194 PIR:S20811
RefSeq:NP_031568.2 UniGene:Mm.2608 ProteinModelPortal:P28653
SMR:P28653 IntAct:P28653 STRING:P28653 PhosphoSite:P28653
PaxDb:P28653 PRIDE:P28653 Ensembl:ENSMUST00000033741
Ensembl:ENSMUST00000169489 GeneID:12111 KEGG:mmu:12111
InParanoid:P28653 NextBio:280425 Bgee:P28653 CleanEx:MM_BGN
Genevestigator:P28653 GermOnline:ENSMUSG00000031375 Uniprot:P28653
Length = 369
Score = 211 (79.3 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 72/226 (31%), Positives = 111/226 (49%)
Query: 76 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 134
+ ++ N I+ +R+D+F+ L +L ++ L NN+I+ ++ + S L KL LY+S N L E
Sbjct: 95 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI 154
Query: 135 LLDDIRGLKRLRTVDLSYNKINK--F-GTRNEGKNQVQG--VTNI-FE------LKLQHN 182
+ L LR D K+ K F G RN ++ G + N FE LKL +
Sbjct: 155 PPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 214
Query: 183 EIENLDGALMGI-----HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
I + L GI L+ L L HNK++ I +D + L L + HN + +E
Sbjct: 215 RIS--EAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 272
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI 283
S +FLP L EL + +N L+R+ L +L L NNI + I
Sbjct: 273 SLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGI 318
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L NN++ + E L KLQ L I +N L +P ++ S L L ++N
Sbjct: 113 GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDN 170
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
RI + G+ GL + M N + + F L L+ + + ++T + L
Sbjct: 171 RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP 229
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L+L HN++ L+D+ +L + L +N+I G + + + E
Sbjct: 230 --ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI---ENGS--LSFLPTLRE 282
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L L +N++ + L + L + L N + + +DF
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGINDF 321
>RGD|2207 [details] [associations]
symbol:Bgn "biglycan" species:10116 "Rattus norvegicus" [GO:0001974
"blood vessel remodeling" evidence=IEP] [GO:0005539
"glycosaminoglycan binding" evidence=IEA;ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0019800 "peptide cross-linking via chondroitin
4-sulfate glycosaminoglycan" evidence=IEA;ISO] [GO:0030133 "transport
vesicle" evidence=IEA;ISO] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0042383 "sarcolemma" evidence=IEA;ISO] [GO:0050840
"extracellular matrix binding" evidence=IEA;ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:2207 GO:GO:0005578 eggNOG:COG4886 GO:GO:0042383
GO:GO:0001974 GO:GO:0030133 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0050840 GeneTree:ENSGT00700000104006
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 CTD:633 KO:K08118
OMA:IQFGNYK OrthoDB:EOG4868CN EMBL:U17834 EMBL:BC072480
IPI:IPI00191090 PIR:PT0077 PIR:S32793 RefSeq:NP_058783.1
UniGene:Rn.783 ProteinModelPortal:P47853 SMR:P47853 IntAct:P47853
STRING:P47853 PRIDE:P47853 Ensembl:ENSRNOT00000023920 GeneID:25181
KEGG:rno:25181 InParanoid:P47853 NextBio:605671 Genevestigator:P47853
GermOnline:ENSRNOG00000017440 Uniprot:P47853
Length = 369
Score = 211 (79.3 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 72/226 (31%), Positives = 111/226 (49%)
Query: 76 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 134
+ ++ N I+ +R+D+F+ L +L ++ L NN+I+ ++ + S L KL LY+S N L E
Sbjct: 95 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI 154
Query: 135 LLDDIRGLKRLRTVDLSYNKINK--F-GTRNEGKNQVQG--VTNI-FE------LKLQHN 182
+ L LR D K+ K F G RN ++ G + N FE LKL +
Sbjct: 155 PPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 214
Query: 183 EIENLDGALMGI-----HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
I + L GI L+ L L HNK++ I +D + L L + HN + +E
Sbjct: 215 RIS--EAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 272
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI 283
S +FLP L EL + +N L+R+ L +L L NNI + I
Sbjct: 273 SLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGI 318
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L NN++ + E L KLQ L I +N L +P ++ S L L ++N
Sbjct: 113 GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDN 170
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
RI + G+ GL + M N + + F L L+ + + ++T + L
Sbjct: 171 RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP 229
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L+L HN++ L+D+ +L + L +N+I G + + + E
Sbjct: 230 --ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI---ENGS--LSFLPTLRE 282
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L L +N++ + L + L + L N + + +DF
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGINDF 321
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 215 (80.7 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 53/208 (25%), Positives = 113/208 (54%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 136
++ +N + ++ ++F+ L+ L + L +N I++++ ++ +G+ +L L LS N+++ FL
Sbjct: 67 SLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLN 126
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIH 195
+ R + LR +DLSYN+++ G+ Q +G+ + L L+ N + + +
Sbjct: 127 NTFRPVTNLRNLDLSYNQLHSLGSE-----QFRGLRKLLSLHLRSNSLRTIPVRIFQDCR 181
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
L LDL +N++R+++ + F G+ LK L + HN + L L +L+ L++ N +
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKI 241
Query: 256 TRLDKDFHGL-PVLCKADLAHNNIKAIN 282
+ + + L + DL+ N I+A +
Sbjct: 242 SVIGQTMSWTWSSLQRLDLSGNEIEAFS 269
Score = 199 (75.1 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 64/232 (27%), Positives = 115/232 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANN 58
GL L WL+L++N + ++ E + +L+ L++ N++ L + + + L +L +
Sbjct: 83 GLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSY 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
N++ SL RGL KL ++ N + + FQ+ NL+ + L N+I S+ ++ +
Sbjct: 143 NQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFA 202
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
G+ +L L+L HNQ ++ L L L+ + L +NKI+ G + +++
Sbjct: 203 GMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIG-----QTMSWTWSSLQR 257
Query: 177 LKLQHNEIENLDG--ALMGIHGLSRLDLSHNKLRTISP---DDFIGLDSLKM 223
L L NEIE G + L RL+L NKL I D +I L+ + +
Sbjct: 258 LDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISL 309
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 51/185 (27%), Positives = 87/185 (47%)
Query: 104 QNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 162
++ ++ + SS+S G L+ L +N L + + +GL +L + L +N I+ N
Sbjct: 48 ESQKLQEIPSSISAGCLGLS---LRYNSLQKLKYNQFKGLNQLTWLYLDHNHIS-----N 99
Query: 163 EGKNQVQGVTNIFELKLQHNEIEN-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSL 221
+N G+ + EL L N I L+ + L LDLS+N+L ++ + F GL L
Sbjct: 100 IDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKL 159
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKA 280
L + N L T+ LE L + +N + L ++ F G+ L + L HN
Sbjct: 160 LSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSK 219
Query: 281 INIQL 285
+N+ L
Sbjct: 220 LNLAL 224
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 215 (80.7 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 53/208 (25%), Positives = 113/208 (54%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 136
++ +N + ++ ++F+ L+ L + L +N I++++ ++ +G+ +L L LS N+++ FL
Sbjct: 67 SLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLN 126
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIH 195
+ R + LR +DLSYN+++ G+ Q +G+ + L L+ N + + +
Sbjct: 127 NTFRPVTNLRNLDLSYNQLHSLGSE-----QFRGLRKLLSLHLRSNSLRTIPVRIFQDCR 181
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
L LDL +N++R+++ + F G+ LK L + HN + L L +L+ L++ N +
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKI 241
Query: 256 TRLDKDFHGL-PVLCKADLAHNNIKAIN 282
+ + + L + DL+ N I+A +
Sbjct: 242 SVIGQTMSWTWSSLQRLDLSGNEIEAFS 269
Score = 197 (74.4 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 63/232 (27%), Positives = 115/232 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANN 58
GL L WL+L++N + ++ E + +L+ L++ N++ L + + + L +L +
Sbjct: 83 GLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSY 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
N++ SL RGL KL ++ N + + FQ+ NL+ + L N+I S+ ++ +
Sbjct: 143 NQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFA 202
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
G+ +L L+L HNQ ++ L L L+ + + +NKI+ G + +++
Sbjct: 203 GMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIG-----QTMSWTWSSLQR 257
Query: 177 LKLQHNEIENLDG--ALMGIHGLSRLDLSHNKLRTISP---DDFIGLDSLKM 223
L L NEIE G + L RL+L NKL I D +I L+ + +
Sbjct: 258 LDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISL 309
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 51/185 (27%), Positives = 87/185 (47%)
Query: 104 QNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 162
++ ++ + SS+S G L+ L +N L + + +GL +L + L +N I+ N
Sbjct: 48 ESQKLQEIPSSISAGCLGLS---LRYNSLQKLKYNQFKGLNQLTWLYLDHNHIS-----N 99
Query: 163 EGKNQVQGVTNIFELKLQHNEIEN-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSL 221
+N G+ + EL L N I L+ + L LDLS+N+L ++ + F GL L
Sbjct: 100 IDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKL 159
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKA 280
L + N L T+ LE L + +N + L ++ F G+ L + L HN
Sbjct: 160 LSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSK 219
Query: 281 INIQL 285
+N+ L
Sbjct: 220 LNLAL 224
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 215 (80.7 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 53/208 (25%), Positives = 113/208 (54%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 136
++ +N + ++ ++F+ L+ L + L +N I++++ ++ +G+ +L L LS N+++ FL
Sbjct: 67 SLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLN 126
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIH 195
+ R + LR +DLSYN+++ G+ Q +G+ + L L+ N + + +
Sbjct: 127 NTFRPVTNLRNLDLSYNQLHSLGSE-----QFRGLRKLLSLHLRSNSLRTIPVRIFQDCR 181
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
L LDL +N++R+++ + F G+ LK L + HN + L L +L+ L++ N +
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKI 241
Query: 256 TRLDKDFHGL-PVLCKADLAHNNIKAIN 282
+ + + L + DL+ N I+A +
Sbjct: 242 SVIGQTMSWTWSSLQRLDLSGNEIEAFS 269
Score = 197 (74.4 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 63/232 (27%), Positives = 115/232 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANN 58
GL L WL+L++N + ++ E + +L+ L++ N++ L + + + L +L +
Sbjct: 83 GLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSY 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
N++ SL RGL KL ++ N + + FQ+ NL+ + L N+I S+ ++ +
Sbjct: 143 NQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFA 202
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
G+ +L L+L HNQ ++ L L L+ + + +NKI+ G + +++
Sbjct: 203 GMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIG-----QTMSWTWSSLQR 257
Query: 177 LKLQHNEIENLDG--ALMGIHGLSRLDLSHNKLRTISP---DDFIGLDSLKM 223
L L NEIE G + L RL+L NKL I D +I L+ + +
Sbjct: 258 LDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISL 309
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 51/185 (27%), Positives = 87/185 (47%)
Query: 104 QNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 162
++ ++ + SS+S G L+ L +N L + + +GL +L + L +N I+ N
Sbjct: 48 ESQKLQEIPSSISAGCLGLS---LRYNSLQKLKYNQFKGLNQLTWLYLDHNHIS-----N 99
Query: 163 EGKNQVQGVTNIFELKLQHNEIEN-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSL 221
+N G+ + EL L N I L+ + L LDLS+N+L ++ + F GL L
Sbjct: 100 IDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKL 159
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKA 280
L + N L T+ LE L + +N + L ++ F G+ L + L HN
Sbjct: 160 LSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSK 219
Query: 281 INIQL 285
+N+ L
Sbjct: 220 LNLAL 224
>UNIPROTKB|Q99983 [details] [associations]
symbol:OMD "Osteomodulin" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005796 "Golgi lumen"
evidence=TAS] [GO:0005975 "carbohydrate metabolic process"
evidence=TAS] [GO:0018146 "keratan sulfate biosynthetic process"
evidence=TAS] [GO:0030203 "glycosaminoglycan metabolic process"
evidence=TAS] [GO:0042339 "keratan sulfate metabolic process"
evidence=TAS] [GO:0042340 "keratan sulfate catabolic process"
evidence=TAS] [GO:0043202 "lysosomal lumen" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001611 PROSITE:PS51450
Reactome:REACT_116125 GO:GO:0005576 GO:GO:0005975 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0007155
GO:GO:0043202 GO:GO:0005796 EMBL:CH471089 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AL137848 GO:GO:0018146
GO:GO:0042340 HOGENOM:HOG000234447 HOVERGEN:HBG108061 CTD:4958
KO:K08124 OrthoDB:EOG415GDJ EMBL:AB000114 EMBL:AB009589
EMBL:AY358872 EMBL:BC046356 IPI:IPI00020990 RefSeq:NP_005005.1
UniGene:Hs.94070 ProteinModelPortal:Q99983 SMR:Q99983 STRING:Q99983
DMDM:20138850 PaxDb:Q99983 PRIDE:Q99983 Ensembl:ENST00000375550
GeneID:4958 KEGG:hsa:4958 UCSC:uc004asd.4 GeneCards:GC09M095176
HGNC:HGNC:8134 neXtProt:NX_Q99983 PharmGKB:PA31921
InParanoid:Q99983 OMA:FYIPRNL GenomeRNAi:4958 NextBio:19096
Bgee:Q99983 CleanEx:HS_OMD Genevestigator:Q99983
GermOnline:ENSG00000127083 Uniprot:Q99983
Length = 421
Score = 212 (79.7 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 68/234 (29%), Positives = 116/234 (49%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
S+Y +N ++ ++ + + +L + FN+I V + F N +L I+L +N+I S
Sbjct: 75 SMYCDNRKLKTIPNIPMHIQQLY---LQFNEIEAVTANSFINATHLKEINLSHNKIKSQK 131
Query: 113 SS---LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
+ L L L+L HN L EF + L+RL L YN+I+K T N +
Sbjct: 132 IDYGVFAKLPNLLQLHLEHNNLEEFPFPLPKSLERLL---LGYNEISKLQT-----NAMD 183
Query: 170 GVTNIFELKLQHNEI-ENL--DGALMGIHGLSRLDLSHNKLRTISPDDFIGL-DSLKMLD 225
G+ N+ L L +N + ++L D + L +L+L N+L ++ P GL SL L
Sbjct: 184 GLVNLTMLDLCYNYLHDSLLKDKIFAKMEKLMQLNLCSNRLESMPP----GLPSSLMYLS 239
Query: 226 ISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIK 279
+ +N ++++ E LP L L +SHN L + + LP + + + HN +K
Sbjct: 240 LENNSISSIPEKYFDKLPKLHTLRMSHNKLQDIPYNIFNLPNIVELSVGHNKLK 293
Score = 145 (56.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 64/233 (27%), Positives = 111/233 (47%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLV---IEQNQLEALPSDIQLFSQLGSLYANNN 59
T L + L++N++KS + G +KL L+ +E N LE P L L L N
Sbjct: 115 THLKEINLSHNKIKSQKIDYGVFAKLPNLLQLHLEHNNLEEFP--FPLPKSLERLLLGYN 172
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
I+ L + GL L + ++ +N + ++++ F + L ++L +N++ SM L
Sbjct: 173 EISKLQTNAMDGLVNLTMLDLCYNYLHDSLLKDKIFAKMEKLMQLNLCSNRLESMPPGLP 232
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI-----NKFGTRN--E---GKN 166
+ L YL L +N ++ L +L T+ +S+NK+ N F N E G N
Sbjct: 233 --SSLMYLSLENNSISSIPEKYFDKLPKLHTLRMSHNKLQDIPYNIFNLPNIVELSVGHN 290
Query: 167 QVQGV----TNIFELKLQHNEIENLDGALM--GI-----HGLSRLDLSHNKLR 208
+++ N+ L LQ+NEIE ++ +M I H L+ + + NKL+
Sbjct: 291 KLKQAFYIPRNLEHLYLQNNEIEKMNLTVMCPSIDPLHYHHLTYIRVDQNKLK 343
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 52/193 (26%), Positives = 92/193 (47%)
Query: 97 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDD--IRGLKRLRTVDLSYN 153
++ + LQ N+I ++ + S T L + LSHN++ +D L L + L +N
Sbjct: 92 HIQQLYLQFNEIEAVTANSFINATHLKEINLSHNKIKSQKIDYGVFAKLPNLLQLHLEHN 151
Query: 154 KINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLR-TIS 211
+ +F ++ L L +NEI L A+ G+ L+ LDL +N L ++
Sbjct: 152 NLEEF--------PFPLPKSLERLLLGYNEISKLQTNAMDGLVNLTMLDLCYNYLHDSLL 203
Query: 212 PDD-FIGLDSLKMLDISHNLLTTLEETSKTFLPA-LEELFVSHNSLTRL-DKDFHGLPVL 268
D F ++ L L++ N L E+ LP+ L L + +NS++ + +K F LP L
Sbjct: 204 KDKIFAKMEKLMQLNLCSNRL----ESMPPGLPSSLMYLSLENNSISSIPEKYFDKLPKL 259
Query: 269 CKADLAHNNIKAI 281
++HN ++ I
Sbjct: 260 HTLRMSHNKLQDI 272
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 215 (80.7 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 66/237 (27%), Positives = 119/237 (50%)
Query: 29 QLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITM 86
Q L + N ++ L S+ +QL LY ++N I+S+D +G+ +L+ + N+IT
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
+ F + NL ++ L N++ ++ S GL KL L+L N L + + + L
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSH 204
+DL YN++ R+ +N G+ + EL L+HN+ ++ A + L + L
Sbjct: 184 DFLDLGYNRL-----RSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQW 238
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD 261
N++R+IS SL LD+S N + +E + LP L++L + N LT + ++
Sbjct: 239 NRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQE 295
Score = 212 (79.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 64/235 (27%), Positives = 119/235 (50%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL L WL+L++N + S+ E + +L+ L++ N++ L + L +L +
Sbjct: 83 GLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSY 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N++ +L +GL KL + ++ N + V FQ+ NLD + L N++ S++ ++ +
Sbjct: 143 NKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFA 202
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL KL L+L HNQ ++ L LR++ L +N+I ++G +++
Sbjct: 203 GLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSI---SQGLTWTW--SSLHN 257
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L L N+I+ ++ G + L +L+L NKL IS + SL + +S N+
Sbjct: 258 LDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISLISITLSGNM 312
Score = 196 (74.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 68/271 (25%), Positives = 129/271 (47%)
Query: 14 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 73
+LK + L L L L+++ Q A P + + ++ +Y ++ + + G +
Sbjct: 8 QLKGMSVVLVLLPTLLLVMLTGAQ-RACPKNCRCDGKI--VYCESHAFADIPENISGGS- 63
Query: 74 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLT 132
Q ++ FN I ++ ++F L+ L + L +N I+S++ + G+ +L L LS N++T
Sbjct: 64 -QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKIT 122
Query: 133 EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GAL 191
+ LR +DLSYNK+ ++E Q +G+ + L L+ N ++ +
Sbjct: 123 YLHNKTFHPVPNLRNLDLSYNKLQTL--QSE---QFKGLRKLIILHLRSNSLKTVPIRVF 177
Query: 192 MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVS 251
L LDL +N+LR++S + F GL LK L + HN + + L L +++
Sbjct: 178 QDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQ 237
Query: 252 HNSLTRLDKDFHGL-PVLCKADLAHNNIKAI 281
N + + + L DL+ N+I+ I
Sbjct: 238 WNRIRSISQGLTWTWSSLHNLDLSGNDIQGI 268
Score = 181 (68.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 55/185 (29%), Positives = 92/185 (49%)
Query: 101 ISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+SL+ N I + S+ +GL +L +LYL HN ++ D +G++RL+ + LS NKI
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDDFIGL 218
+ V N+ L L +N+++ L G+ L L L N L+T+ F
Sbjct: 126 NKT-----FHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDC 180
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNN 277
+L LD+ +N L +L + L L+EL + HN ++++ F L L L N
Sbjct: 181 RNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNR 240
Query: 278 IKAIN 282
I++I+
Sbjct: 241 IRSIS 245
Score = 180 (68.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 63/258 (24%), Positives = 126/258 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
G L+ F + +LKS Q L++L L ++ N + ++ D Q +L L ++N
Sbjct: 62 GSQGLSLRFNSIQKLKS--NQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSN 119
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SG 117
+IT L + L+ ++ +N++ ++ ++F+ L L + L++N + ++ +
Sbjct: 120 KITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQD 179
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L +L L +N+L + GL +L+ + L +N+ +K + + + N+ +
Sbjct: 180 CRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPR-----LFNLRSI 234
Query: 178 KLQHNEIENLDGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-E 235
LQ N I ++ L L LDLS N ++ I P F L +L+ L++ N LT + +
Sbjct: 235 YLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQ 294
Query: 236 ETSKTFLPALEELFVSHN 253
ET ++ +L + +S N
Sbjct: 295 ETVNAWI-SLISITLSGN 311
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 37/124 (29%), Positives = 65/124 (52%)
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
EN+ G G GLS L N ++ + + F GL+ L L + HN +++++E + +
Sbjct: 57 ENISG---GSQGLS---LRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRR 110
Query: 245 LEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIY 303
L+EL +S N +T L +K FH +P L DL++N ++ + + Q GL + ++
Sbjct: 111 LKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSE-------QFKGLRKLIILH 163
Query: 304 LEGN 307
L N
Sbjct: 164 LRSN 167
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/113 (34%), Positives = 59/113 (52%)
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L+ N I+ L G++ L L L HN + ++ D F G+ LK L +S N +T L
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 236 ETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
+KTF +P L L +S+N L L + F GL L L N++K + I++
Sbjct: 126 --NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRV 176
>UNIPROTKB|P21810 [details] [associations]
symbol:BGN "Biglycan" species:9606 "Homo sapiens"
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0005539
"glycosaminoglycan binding" evidence=IEA] [GO:0019800 "peptide
cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA] [GO:0050840
"extracellular matrix binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009986 "cell
surface" evidence=IDA] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0030206
"chondroitin sulfate biosynthetic process" evidence=TAS]
[GO:0030207 "chondroitin sulfate catabolic process" evidence=TAS]
[GO:0030208 "dermatan sulfate biosynthetic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0030133 "transport
vesicle" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISS;IDA] Reactome:REACT_111217 InterPro:IPR001611
PROSITE:PS51450 Reactome:REACT_116125 GO:GO:0009986 GO:GO:0005975
GO:GO:0005578 eggNOG:COG4886 GO:GO:0042383 GO:GO:0001974
GO:GO:0043202 GO:GO:0005796 GO:GO:0030133 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0050840 GO:GO:0030207
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 EMBL:CH471172 EMBL:U82695 GO:GO:0030206
GO:GO:0005201 GO:GO:0030208 GO:GO:0005539 GO:GO:0019800 CTD:633
KO:K08118 OMA:IQFGNYK OrthoDB:EOG4868CN EMBL:J04599 EMBL:M65153
EMBL:M65152 EMBL:BT007323 EMBL:BC002416 EMBL:BC004244 EMBL:U11686
IPI:IPI00010790 PIR:A40757 RefSeq:NP_001702.1 UniGene:Hs.821
ProteinModelPortal:P21810 SMR:P21810 IntAct:P21810 STRING:P21810
PhosphoSite:P21810 DMDM:266762 PaxDb:P21810 PRIDE:P21810 DNASU:633
Ensembl:ENST00000331595 GeneID:633 KEGG:hsa:633 UCSC:uc004fhr.2
GeneCards:GC0XP152762 HGNC:HGNC:1044 HPA:CAB003678 HPA:HPA003157
MIM:301870 neXtProt:NX_P21810 PharmGKB:PA25346 InParanoid:P21810
ChiTaRS:BGN GenomeRNAi:633 NextBio:2558 PMAP-CutDB:P21810
ArrayExpress:P21810 Bgee:P21810 CleanEx:HS_BGN
Genevestigator:P21810 GermOnline:ENSG00000182492 Uniprot:P21810
Length = 368
Score = 210 (79.0 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 71/226 (31%), Positives = 110/226 (48%)
Query: 76 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 134
+ ++ N I+ +R+D+F+ L +L ++ L NN+I+ ++ + S L KL LY+S N L E
Sbjct: 94 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI 153
Query: 135 LLDDIRGLKRLRTVDLSYNKINK--F-GTRNEGKNQVQG--VTNI-FE------LKLQHN 182
+ L LR D K+ K F G RN ++ G + N FE LKL +
Sbjct: 154 PPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 213
Query: 183 EIENLDGALMGI-----HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
I + L GI L+ L L HNK++ I +D + L L + HN + +E
Sbjct: 214 RIS--EAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 271
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI 283
S +FLP L EL + +N L R+ L +L L NNI + +
Sbjct: 272 SLSFLPTLRELHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGV 317
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L NN++ + E L KLQ L I +N L +P ++ S L L ++N
Sbjct: 112 GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDN 169
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
RI + G+ GL + M N + + F L L+ + + ++T + L
Sbjct: 170 RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP 228
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L+L HN++ L+D+ +L + L +N+I G + + + E
Sbjct: 229 --ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI---ENGS--LSFLPTLRE 281
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L L +N++ + L + L + L N + + +DF
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDF 320
>UNIPROTKB|P21809 [details] [associations]
symbol:BGN "Biglycan" species:9913 "Bos taurus" [GO:0030133
"transport vesicle" evidence=ISS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0050840 "extracellular
matrix binding" evidence=IEA] [GO:0042383 "sarcolemma"
evidence=IEA] [GO:0019800 "peptide cross-linking via chondroitin
4-sulfate glycosaminoglycan" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0005539 "glycosaminoglycan binding"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 GO:GO:0042383 GO:GO:0030133 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0050840
GeneTree:ENSGT00700000104006 HOGENOM:HOG000261690
HOVERGEN:HBG016052 InterPro:IPR016352 PIRSF:PIRSF002490
GO:GO:0005539 GO:GO:0019800 EMBL:S82652 EMBL:BT021201 EMBL:BC118460
IPI:IPI00697081 PIR:S32559 RefSeq:NP_847888.2 UniGene:Bt.5351
PDB:2FT3 PDBsum:2FT3 ProteinModelPortal:P21809 SMR:P21809
IntAct:P21809 STRING:P21809 PRIDE:P21809 Ensembl:ENSBTAT00000047242
GeneID:280733 KEGG:bta:280733 CTD:633 InParanoid:P21809 KO:K08118
OMA:IQFGNYK OrthoDB:EOG4868CN EvolutionaryTrace:P21809
NextBio:20804907 ArrayExpress:P21809 Uniprot:P21809
Length = 369
Score = 210 (79.0 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 79/255 (30%), Positives = 121/255 (47%)
Query: 76 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 134
+ ++ N I+ +R+D+F+ L +L ++ L NN+I+ ++ + S L KL LY+S N L E
Sbjct: 95 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEI 154
Query: 135 LLDDIRGLKRLRTVDLSYNKINK--F-GTRNEGKNQVQG--VTNI-FE------LKLQHN 182
+ L LR D K+ K F G RN ++ G + N FE LKL +
Sbjct: 155 PPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 214
Query: 183 EIENLDGALMGI-----HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
I + L GI L+ L L HNK++ I +D + L L + HN + +E
Sbjct: 215 RIS--EAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 272
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQI-FGL 296
S +FLP L EL + +N L+R+ L +L L NNI + + C + FG+
Sbjct: 273 SLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVN----DFCPVGFGV 328
Query: 297 NSTLR--IYLEGNPV 309
I L NPV
Sbjct: 329 KRAYYNGISLFNNPV 343
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L L NN++ + E L KLQ L I +N L +P ++ S L L ++N
Sbjct: 113 GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDN 170
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
RI + G+ GL + M N + + F L L+ + + ++T + L
Sbjct: 171 RIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP 229
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L+L HN++ L+D+ +L + L +N+I G + + + E
Sbjct: 230 --ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI---ENGS--LSFLPTLRE 282
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
L L +N++ + L + L + L N + + +DF
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDF 321
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 88/323 (27%), Positives = 141/323 (43%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N ++ + G KL+ L + NQ+ L P Q L SL N+IT L
Sbjct: 307 LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS 366
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTKLAYLY 125
L GL LQ+ ++ N+I +R D FQ+LHNL+ +SL +N++ T + S L + ++
Sbjct: 367 LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMH 426
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG--VTNIFELKLQHNE 183
L+ N F+ D LK L L N I G R ++ + I K + +
Sbjct: 427 LAQNP---FICDC--HLKWLADY-LHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSG 480
Query: 184 IENLDGALMG--IHGLS----------RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
E+ L G L+ +D S+ +L I PD + L +++N
Sbjct: 481 TEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKI-PDHIPQYTA--ELRLNNNEF 537
Query: 232 TTLEETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALK 288
T LE T F LP L ++ S+N +T +++ F G + + L N ++ N+Q +
Sbjct: 538 TVLEATG-IFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE--NVQHKM- 593
Query: 289 TQCQIFGLNSTLRIYLEGNPVLC 311
GL S + L N + C
Sbjct: 594 ----FKGLESLKTLMLRSNRISC 612
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/157 (30%), Positives = 79/157 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T D GL+ LR + L N+I+ T G Q + + L+L N
Sbjct: 60 LDLNGNNITRITKIDFAGLRHLRVLQLMENRIS---TIERGA--FQDLKELERLRLNRNN 114
Query: 184 IENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L +G L RLDLS N+++ I F G +K L + +N ++ +E+ + L
Sbjct: 115 LQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNI 278
LE L +++N++TRL F+ +P L L NN+
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 138 (53.6 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 40/135 (29%), Positives = 71/135 (52%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
GL L L L NR+ ++E G L +L+ L + +N L+ P + L ++L L +
Sbjct: 77 GLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSE 136
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N+I ++ RG ++ +D+NQI+ + F+ L +L+ ++L NN IT ++ +S +
Sbjct: 137 NQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFN 196
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 197 HMPKLRTFRLHSNNL 211
Score = 136 (52.9 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 51/170 (30%), Positives = 84/170 (49%)
Query: 164 GKNQVQGVTN----IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
GK + TN I E++L+ N I + GA L RLDLS+N++ ++PD F GL
Sbjct: 288 GKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGL 347
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT--RLD--KDFHGLPVLCKADLA 274
SL L + N +T L ++ L +L+ L ++ N + R+D +D H L +L D
Sbjct: 348 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-- 405
Query: 275 HNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
N ++ + A T L + ++L NP +CD ++ + D + T
Sbjct: 406 -NKLQTV----AKGT---FSALRAIQTMHLAQNPFICDCHLKWLADYLHT 447
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 100 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKF 158
++ N ++ + + T A L L++N+ T I + L +LR ++ S NKI
Sbjct: 508 TVDCSNQRLNKIPDHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 565
Query: 159 GTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIG 217
EG +G + + E+ L N +EN+ + G+ L L L N++ + D FIG
Sbjct: 566 ---EEGA--FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIG 620
Query: 218 LDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
L S+++L + N +TT+ + L +L L
Sbjct: 621 LGSVRLLSLYDNQITTVAPGAFDSLHSLSTL 651
Score = 128 (50.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 38/121 (31%), Positives = 59/121 (48%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L ++P +I ++ L NN RIT +D GL L+V + N+I+ + R FQ+L
Sbjct: 46 LRSVPRNIPRNTERLDLNGNNITRITKID--FAGLRHLRVLQLMENRISTIERGAFQDLK 103
Query: 97 NLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N + L G KL L LS NQ+ RG ++ + L YN+I
Sbjct: 104 ELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQI 163
Query: 156 N 156
+
Sbjct: 164 S 164
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 44/134 (32%), Positives = 69/134 (51%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL+ N + I+ DF GL L++L + N ++T+E + L LE L ++ N+L
Sbjct: 59 RLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLF 118
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F G L + DL+ N I+AI + A + I L L+ N + C D +
Sbjct: 119 PELLFLGTAKLYRLDLSENQIQAIP-RKAFRGAVDIKNLQ------LDYNQISCIEDGAF 171
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 172 RALRDLEVLTLNNN 185
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 40/161 (24%), Positives = 70/161 (43%)
Query: 97 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N + + L N IT + +GL L L L N+++ + LK L + L+ N +
Sbjct: 56 NTERLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNL 115
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDD 214
F + G ++ L L N+I+ + A G + L L +N++ I
Sbjct: 116 QLFP-----ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA 170
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
F L L++L +++N +T L S +P L + N+L
Sbjct: 171 FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 116 (45.9 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 34/92 (36%), Positives = 52/92 (56%)
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 124
G+ + +T+L +D NQ T+V + E N +L I L NN+I+++ N S S +T+L L
Sbjct: 743 GIPKDVTELY---LDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 798
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
LS+N+L GLK LR + L N I+
Sbjct: 799 ILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 830
Score = 115 (45.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 11 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLL 68
+N RL + + + +L+L E LEA + QL + +NN+IT ++ G
Sbjct: 512 SNQRLNKIPDHIPQYTAELRLNNNEFTVLEAT-GIFKKLPQLRKINFSNNKITDIEEGAF 570
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLS 127
G + + + N++ V+ F+ L +L ++ L++N+I+ + N S GL + L L
Sbjct: 571 EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLY 630
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
NQ+T L L T++L N N
Sbjct: 631 DNQITTVAPGAFDSLHSLSTLNLLANPFN 659
Score = 96 (38.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + + L L LS+N+LR I P F GL SL++L + N ++ +
Sbjct: 774 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP 833
Query: 236 ETSKTFLPALEELFVSHNSL 255
E + L AL L + N L
Sbjct: 834 EGAFNDLSALSHLAIGANPL 853
Score = 95 (38.5 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN LE G L +L+ + N++ + + S + + +NR+ ++
Sbjct: 530 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 589
Query: 65 DG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
+ +GL L+ + N+I+ V D F L ++ +SL +NQIT++ + L L+
Sbjct: 590 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLS 649
Query: 123 YLYLSHN 129
L L N
Sbjct: 650 TLNLLAN 656
Score = 94 (38.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T +L N N+F T E + + + ++ +N+I +++ GA G G++ + L+ N
Sbjct: 527 TAELRLNN-NEF-TVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 584
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L + F GL+SLK L + N ++ + S L ++ L + N +T + F
Sbjct: 585 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDS 644
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N LA
Sbjct: 645 LHSLSTLNLLANPFNC-NCHLA 665
Score = 87 (35.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N+ T+ P + L ++D+S+N ++TL S + + L L +S+N L
Sbjct: 748 VTELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 806
Query: 257 RLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ + F GL L L N+I + + L++ + + NP+ CD +M
Sbjct: 807 CIPPRTFDGLKSLRLLSLHGNDISVV-------PEGAFNDLSALSHLAIGANPLYCDCNM 859
Query: 316 RAVID 320
+ + D
Sbjct: 860 QWLSD 864
Score = 83 (34.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 31/117 (26%), Positives = 50/117 (42%)
Query: 117 GLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
G+ K + LYL NQ T + ++ K L +DLS N+I+ ++ +T +
Sbjct: 743 GIPKDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQS-----FSNMTQLL 796
Query: 176 ELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
L L +N + + G+ L L L N + + F L +L L I N L
Sbjct: 797 TLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 853
Score = 81 (33.6 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 162 NEG-KNQVQGVT-NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
N+G K +G+ ++ EL L N+ + L L+ +DLS+N++ T+S F +
Sbjct: 734 NKGLKVLPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT 793
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
L L +S+N L + + L +L L + N ++ + + F+ L L + N
Sbjct: 794 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 851
Score = 72 (30.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 25/84 (29%), Positives = 48/84 (57%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD--IQLFS-QLGSLYA 56
G + +N + L +NRL++++ ++ L L+ L++ N++ + +D I L S +L SLY
Sbjct: 572 GASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLY- 630
Query: 57 NNNRITSL-DGLLRGLTKLQVFNM 79
+N+IT++ G L L N+
Sbjct: 631 -DNQITTVAPGAFDSLHSLSTLNL 653
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T D GL+ LR + L NKI+ T G Q + + L+L N
Sbjct: 56 LDLNGNNITRITKTDFAGLRHLRVLQLMENKIS---TIERGA--FQDLKELERLRLNRNN 110
Query: 184 IENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L +G L RLDLS N+++ I F G +K L + +N ++ +E+ + L
Sbjct: 111 LQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 170
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNI 278
LE L +++N++TRL F+ +P L L NN+
Sbjct: 171 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 207
Score = 164 (62.8 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 44/124 (35%), Positives = 66/124 (53%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD-G 66
L N +K + G KL+ + + NQ+ EA P Q L SL N+IT L G
Sbjct: 303 LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKG 362
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTKLAYLY 125
L GL LQ+ ++ N+I +R D FQ+LHNL+ +SL +N++ T + S L + L+
Sbjct: 363 LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLH 422
Query: 126 LSHN 129
L+ N
Sbjct: 423 LAQN 426
Score = 143 (55.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 46/134 (34%), Positives = 71/134 (52%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL+ N + I+ DF GL L++L + N ++T+E + L LE L ++ N+L L
Sbjct: 55 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLL 114
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F G P L + DL+ N I+AI + A + I L L+ N + C D +
Sbjct: 115 SELLFLGTPKLYRLDLSENQIQAIP-RKAFRGAVDIKNLQ------LDYNQISCIEDGAF 167
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 168 RALRDLEVLTLNNN 181
Score = 132 (51.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 41/137 (29%), Positives = 72/137 (52%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA--- 56
GL L L L N++ ++E G L +L+ L + +N L+ L S++ LF LY
Sbjct: 73 GLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLL-SEL-LFLGTPKLYRLDL 130
Query: 57 NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SS 114
+ N+I ++ RG ++ +D+NQI+ + F+ L +L+ ++L NN IT ++ +S
Sbjct: 131 SENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVAS 190
Query: 115 LSGLTKLAYLYLSHNQL 131
+ + KL L N L
Sbjct: 191 FNHMPKLRTFRLHSNNL 207
Score = 129 (50.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 50/170 (29%), Positives = 84/170 (49%)
Query: 164 GKNQVQGVTN----IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
GK + TN I E++L+ N I+ + GA L R+DLS+N++ +PD F GL
Sbjct: 284 GKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGL 343
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT--RLD--KDFHGLPVLCKADLA 274
SL L + N +T L + L +L+ L ++ N + R+D +D H L +L D
Sbjct: 344 RSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-- 401
Query: 275 HNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
N ++ I A T + + + ++L NP +CD ++ + D + T
Sbjct: 402 -NKLQTI----AKGTFSPLRAIQT---LHLAQNPFICDCHLKWLADYLHT 443
Score = 128 (50.1 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 38/121 (31%), Positives = 59/121 (48%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L +P +I ++ L NN RIT D GL L+V + N+I+ + R FQ+L
Sbjct: 42 LRGVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRVLQLMENKISTIERGAFQDLK 99
Query: 97 NLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N + ++ L G KL L LS NQ+ RG ++ + L YN+I
Sbjct: 100 ELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQI 159
Query: 156 N 156
+
Sbjct: 160 S 160
Score = 124 (48.7 bits), Expect = 0.00043, P = 0.00043
Identities = 43/139 (30%), Positives = 70/139 (50%)
Query: 94 NL-HNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
NL + I L+ N I + + S KL + LS+NQ++E D +GL+ L ++ L
Sbjct: 293 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLY 352
Query: 152 YNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTI 210
NKI + K +G+ ++ L L N+I L A +H L+ L L NKL+TI
Sbjct: 353 GNKITELP-----KGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 407
Query: 211 SPDDFIGLDSLKMLDISHN 229
+ F L +++ L ++ N
Sbjct: 408 AKGTFSPLRAIQTLHLAQN 426
Score = 120 (47.3 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 39/152 (25%), Positives = 70/152 (46%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L LN N + + + L L++L + +N++ + Q +L L N N + L
Sbjct: 56 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLS 115
Query: 66 GLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAY 123
LL G KL ++ NQI + R F+ ++ ++ L NQI+ + + + L L
Sbjct: 116 ELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 175
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L L++N +T + + +LRT L N +
Sbjct: 176 LTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 207
Score = 120 (47.3 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 39/149 (26%), Positives = 74/149 (49%)
Query: 11 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLL 68
+N +L + + + +L+L E + LEA + QL + +NN+IT ++ G
Sbjct: 516 SNQKLNKIPDHIPQYTAELRLNNNEFSVLEAT-GIFKKLPQLRKINLSNNKITDIEEGAF 574
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLS 127
G + + + N++ VR F+ L +L ++ L++N+++ + N S +GL+ + L L
Sbjct: 575 DGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLY 634
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
NQ+T L L T++L N N
Sbjct: 635 DNQITTVAPGSFDTLHSLSTLNLLANPFN 663
Score = 110 (43.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 40/153 (26%), Positives = 80/153 (52%)
Query: 57 NNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-S 114
+N ++ + D + + +L++ N +F+ + F+ L L I+L NN+IT + +
Sbjct: 516 SNQKLNKIPDHIPQYTAELRLNNNEFSVLEAT--GIFKKLPQLRKINLSNNKITDIEEGA 573
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
G + + L L+ N+L E + D + +GL+ L+T+ L N+++ G + G+++
Sbjct: 574 FDGASGVNELLLTSNRL-ETVRDKMFKGLESLKTLMLRSNRVSCVGN-----DSFTGLSS 627
Query: 174 IFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
+ L L N+I + G+ +H LS L+L N
Sbjct: 628 VRLLSLYDNQITTVAPGSFDTLHSLSTLNLLAN 660
Score = 108 (43.1 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 40/142 (28%), Positives = 68/142 (47%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T +L N N+F E + + + ++ L +N+I +++ GA G G++ L L+ N
Sbjct: 531 TAELRLNN-NEFSVL-EATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSN 588
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK-DFHG 264
+L T+ F GL+SLK L + N ++ + S T L ++ L + N +T + F
Sbjct: 589 RLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDT 648
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N LA
Sbjct: 649 LHSLSTLNLLANPFNC-NCHLA 669
Score = 107 (42.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN LE G L +L+ + + N++ + S + L +NR+ ++
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 593
Query: 65 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
D + +GL L+ + N+++ V D F L ++ +SL +NQIT++ S L L+
Sbjct: 594 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLS 653
Query: 123 YLYLSHN 129
L L N
Sbjct: 654 TLNLLAN 660
Score = 99 (39.9 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD--GALMGIHGLSRLDLSH 204
TVD S K+NK + + T EL+L +NE L+ G + L +++LS+
Sbjct: 512 TVDCSNQKLNKI------PDHIPQYTA--ELRLNNNEFSVLEATGIFKKLPQLRKINLSN 563
Query: 205 NKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FH 263
NK+ I F G + L ++ N L T+ + L +L+ L + N ++ + D F
Sbjct: 564 NKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFT 623
Query: 264 GLPVLCKADLAHNNIKAI 281
GL + L N I +
Sbjct: 624 GLSSVRLLSLYDNQITTV 641
Score = 88 (36.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + + L L LS+N+LR I F GL SL++L + N ++ +
Sbjct: 778 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVP 837
Query: 236 ETSKTFLPALEELFVSHNSL 255
E + L AL L + N L
Sbjct: 838 EGAFNDLSALSHLAIGANPL 857
Score = 87 (35.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N+ T+ P + L ++D+S+N ++TL S + + L L +S+N L
Sbjct: 752 VTELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 810
Query: 257 RLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ + F GL L L N+I + + L++ + + NP+ CD +M
Sbjct: 811 CIPARTFDGLKSLRLLSLHGNDISVV-------PEGAFNDLSALSHLAIGANPLYCDCNM 863
Query: 316 RAVID 320
+ + D
Sbjct: 864 QWLSD 868
Score = 82 (33.9 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 162 NEG-KNQVQGVT-NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
N+G K +G+ ++ EL L N+ + L L+ +DLS+N++ T+S F +
Sbjct: 738 NKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT 797
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
L L +S+N L + + L +L L + N ++ + + F+ L L + N
Sbjct: 798 QLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 855
Score = 79 (32.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 27/119 (22%), Positives = 55/119 (46%)
Query: 43 SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
+D L L N+I++++ G + L +L+ ++ N + ++ F L +
Sbjct: 69 TDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRL 128
Query: 102 SLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDD--IRGLKRLRTVDLSYNKINK 157
L NQI ++ + G + L L +NQ++ ++D R L+ L + L+ N I +
Sbjct: 129 DLSENQIQAIPRKAFRGAVDIKNLQLDYNQIS--CIEDGAFRALRDLEVLTLNNNNITR 185
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 217 (81.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 69/235 (29%), Positives = 111/235 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L+ L L L+NN+++SL L L+ L + N L P I+ L L ++N
Sbjct: 176 LSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNS 235
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
I+ + DG G L+ ++ N ++ V F NL +L S+ ++ + +L+G
Sbjct: 236 ISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTV 295
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L L L+ +++ + + K LRT+DLSYN I + N G + E+ L
Sbjct: 296 HLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPSFN-------GCHALEEISL 348
Query: 180 QHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
Q N+I + +G G+ L LDLS N + I F L + LD+S N LT+
Sbjct: 349 QRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTS 403
Score = 211 (79.3 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 77/278 (27%), Positives = 134/278 (48%)
Query: 8 LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL- 64
L L N L + + L L +L++L ++ NQL+ +PS+ I+ S L SL + N ITS+
Sbjct: 62 LQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVP 121
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAY 123
+ GL +L+ +D N +T V NL L +++L N+I+S+ + + + L+ L
Sbjct: 122 EDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVV 181
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L+L +N++ GL L T+DL+YN + +F ++ + ++ EL N
Sbjct: 182 LHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEF------PQAIKALPSLKELGFHSNS 235
Query: 184 IENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I + DGA G L + L N L + F L L L I + + + T
Sbjct: 236 ISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ-QFPNLTGT 294
Query: 243 PALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIK 279
LE L ++ ++ + + +L DL++NNI+
Sbjct: 295 VHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIR 332
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 64/222 (28%), Positives = 109/222 (49%)
Query: 64 LDGLLRGLTKL-QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 121
L + GL+ Q + N ++ + L L ++LQNNQ+ ++ S ++ GL+ L
Sbjct: 48 LTAVPEGLSAFTQALQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSAL 107
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L L N +T D GL +LR + L N + + + + + + L L
Sbjct: 108 QSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPV-----HPLSNLPTLQALTLAL 162
Query: 182 NEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
N+I ++ D A + L L L +NK+R++S F GLD+L+ LD+++N L + K
Sbjct: 163 NKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAIKA 222
Query: 241 FLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAI 281
LP+L+EL NS++ + D F G P+L L N + +
Sbjct: 223 -LPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFV 263
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 79/289 (27%), Positives = 132/289 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL +L L L NN+LK++ + + LS LQ L ++ N + ++P D + QL L+ ++
Sbjct: 79 GLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDD 138
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LS 116
N +T + L L LQ + N+I+ + F NL +L + L NN+I S++
Sbjct: 139 NSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFD 198
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L++N L EF I+ L L+ + N I+ N + ++++
Sbjct: 199 GLDNLETLDLNYNNLGEFP-QAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYD 257
Query: 177 LKLQ---HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L ++ NL D + I G S + N T+ + + L K+ I +NL
Sbjct: 258 NPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLES-LTLTGTKISSIPNNLC- 315
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+E L L +S+N++ L F+G L + L N I I
Sbjct: 316 --QEQKM-----LRTLDLSYNNIRDLPS-FNGCHALEEISLQRNQIYQI 356
Score = 160 (61.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 64/256 (25%), Positives = 107/256 (41%)
Query: 29 QLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITM 86
Q L + N L + P + +L L NN++ ++ +RGL+ LQ +D N IT
Sbjct: 60 QALQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITS 119
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
V D F+ L L + L +N +T + LS L L L L+ N+++ L L
Sbjct: 120 VPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSL 179
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+ L NKI R+ ++ G+ N+ L L +N + A+ + L L N
Sbjct: 180 VVLHLHNNKI-----RSLSQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSN 234
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGL 265
+ I F G L+ + + N L+ + ++ L L L + S+ + + G
Sbjct: 235 SISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGT 294
Query: 266 PVLCKADLAHNNIKAI 281
L L I +I
Sbjct: 295 VHLESLTLTGTKISSI 310
Score = 133 (51.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIE-QNQLEALPSDIQLFSQLGSLYANNNRIT 62
L + L +N L + LS L LVI + ++ P+ + L SL +I+
Sbjct: 250 LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPN-LTGTVHLESLTLTGTKIS 308
Query: 63 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK 120
S+ + L + L+ ++ +N I + F H L+ ISLQ NQI + + GL
Sbjct: 309 SIPNNLCQEQKMLRTLDLSYNNIRDL--PSFNGCHALEEISLQRNQIYQIKEGTFQGLIS 366
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQGVTNIFELK 178
L L LS N + E L + +D+S+N++ F T G NQ++ V N F+LK
Sbjct: 367 LRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQLKLVGN-FKLK 424
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 58/231 (25%), Positives = 105/231 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
GL +L L LN N L + L L+ L N + +P L +++ +N
Sbjct: 199 GLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDN 258
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMNSSL 115
++ + + L+ L ++ +MV+ +F NL +L+S++L +I+S+ ++L
Sbjct: 259 PLSFVGNSAFHNLSDLH--SLVIRGASMVQ--QFPNLTGTVHLESLTLTGTKISSIPNNL 314
Query: 116 SGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
K L L LS+N + + L G L + L N+I + EG QG+ ++
Sbjct: 315 CQEQKMLRTLDLSYNNIRD--LPSFNGCHALEEISLQRNQIYQI---KEGT--FQGLISL 367
Query: 175 FELKLQHNEIENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKML 224
L L N I + G ++ LD+S N+L + + GL+ LK++
Sbjct: 368 RILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQLKLV 418
>WB|WBGene00001443 [details] [associations]
symbol:fli-1 species:6239 "Caenorhabditis elegans"
[GO:0003779 "actin binding" evidence=IEA] [GO:0008406 "gonad
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 GO:GO:0005634 GO:GO:0008406
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR007123
PANTHER:PTHR11977 Pfam:PF00626 EMBL:U01183 EMBL:FO080165 PIR:A88536
PIR:S27783 RefSeq:NP_498913.2 UniGene:Cel.5659
ProteinModelPortal:P34268 SMR:P34268 STRING:P34268 PaxDb:P34268
EnsemblMetazoa:B0523.5 GeneID:176215 KEGG:cel:CELE_B0523.5
UCSC:B0523.5 CTD:176215 WormBase:B0523.5
GeneTree:ENSGT00660000095502 HOGENOM:HOG000016110 InParanoid:P34268
OMA:MEEWNED NextBio:891612 Uniprot:P34268
Length = 1257
Score = 218 (81.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 78/283 (27%), Positives = 140/283 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+T + WL LN+++L+ + +L + L+ L + NQL ++ ++ +L S+ +N +
Sbjct: 31 MTQMTWLKLNDSKLEQVPDELSRCANLEHLQMAHNQLISVHGELSDLPRLRSVIVRDNNL 90
Query: 62 TSLD---GLLRGLTKLQVFNMDFNQITMVRRD-EFQNLHNLDSISLQNNQITSMNSSLSG 117
+ + R + L + ++ NQ+ V + E+ + ++S NN T NS +
Sbjct: 91 KTAGIPTDIFR-MKDLTIIDLSRNQLREVPTNLEYAKGSIVLNLSY-NNIETIPNSVCAN 148
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L L +L LS+N+L + L IR L L+++ LS N +N F + Q+ +T++ L
Sbjct: 149 LIDLLFLDLSNNKL-DMLPPQIRRLSMLQSLKLSNNPLNHFQLK-----QLPSMTSLSVL 202
Query: 178 KLQHNE--IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ + ++N+ L +H L +D S N L I P+ L +L+ L++S N + L
Sbjct: 203 HMSNTNRTLDNIPPTLDDMHNLRDVDFSENNL-PIVPEALFKLRNLRKLNLSGNKIEKLN 261
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
T + LE L +SHN LT L L L K A+N +
Sbjct: 262 MTEGEW-ENLETLNMSHNQLTVLPDCVVKLTRLTKLYAANNQL 303
Score = 209 (78.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 67/265 (25%), Positives = 128/265 (48%)
Query: 4 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA--LPSDIQLFSQLGSLYANNNRI 61
+L L + +N+L S+ G+L L +L+ +++ N L+ +P+DI L + + N++
Sbjct: 56 NLEHLQMAHNQLISVHGELSDLPRLRSVIVRDNNLKTAGIPTDIFRMKDLTIIDLSRNQL 115
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ L V N+ +N I + NL +L + L NN++ + + L+ L
Sbjct: 116 REVPTNLEYAKGSIVLNLSYNNIETIPNSVCANLIDLLFLDLSNNKLDMLPPQIRRLSML 175
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS+N L F L + + L + +S N+ T + + + N+ ++
Sbjct: 176 QSLKLSNNPLNHFQLKQLPSMTSLSVLHMS--NTNR--TLDNIPPTLDDMHNLRDVDFSE 231
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N + + AL + L +L+LS NK+ ++ + ++L+ L++SHN LT L +
Sbjct: 232 NNLPIVPEALFKLRNLRKLNLSGNKIEKLNMTEG-EWENLETLNMSHNQLTVLPDCVVK- 289
Query: 242 LPALEELFVSHNSLTRLDKDFHGLP 266
L L +L+ ++N LT F G+P
Sbjct: 290 LTRLTKLYAANNQLT-----FEGIP 309
Score = 184 (69.8 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 73/281 (25%), Positives = 131/281 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYANNN 59
+ DL + L+ N+L+ + L +L + N +E +P+ + L L L +NN
Sbjct: 102 MKDLTIIDLSRNQLREVPTNLEYAKGSIVLNLSYNNIETIPNSVCANLIDLL-FLDLSNN 160
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN--SSLSG 117
++ L +R L+ LQ + N + + + ++ +L + + N T N +L
Sbjct: 161 KLDMLPPQIRRLSMLQSLKLSNNPLNHFQLKQLPSMTSLSVLHMSNTNRTLDNIPPTLDD 220
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+ L + S N L + + + L+ LR ++LS NKI K EG+ + N+ L
Sbjct: 221 MHNLRDVDFSENNLP-IVPEALFKLRNLRKLNLSGNKIEKLNM-TEGEWE-----NLETL 273
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEE 236
+ HN++ L ++ + L++L ++N+L IG L L +L +S+N L + E
Sbjct: 274 NMSHNQLTVLPDCVVKLTRLTKLYAANNQLTFEGIPSGIGKLIQLTVLHLSYNKLELVPE 333
Query: 237 TSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNN 277
+ L++L + HN L L + H LP L DL H N
Sbjct: 334 GISRCVK-LQKLKLDHNRLITLPEGIHLLPDLKVLDL-HEN 372
Score = 166 (63.5 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 66/242 (27%), Positives = 114/242 (47%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQ--LEALPSDIQLFSQLGSLYANN 58
L+ L L L+NN L + QL +++ L +L + L+ +P + L + +
Sbjct: 172 LSMLQSLKLSNNPLNHFQLKQLPSMTSLSVLHMSNTNRTLDNIPPTLDDMHNLRDVDFSE 231
Query: 59 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
N + + L L L+ N+ N+I + E + NL+++++ +NQ+T + + L
Sbjct: 232 NNLPIVPEALFKLRNLRKLNLSGNKIEKLNMTEGE-WENLETLNMSHNQLTVLPDCVVKL 290
Query: 119 TKLAYLYLSHNQLT-EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
T+L LY ++NQLT E + I L +L + LSYNK+ EG + + +L
Sbjct: 291 TRLTKLYAANNQLTFEGIPSGIGKLIQLTVLHLSYNKLELVP---EG---ISRCVKLQKL 344
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
KL HN + L + + L LDL N+ + P D+ K L +N+ +LE
Sbjct: 345 KLDHNRLITLPEGIHLLPDLKVLDLHENENLVMPPKPN---DARKKLAF-YNIDFSLEHQ 400
Query: 238 SK 239
K
Sbjct: 401 RK 402
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 60/250 (24%), Positives = 113/250 (45%)
Query: 39 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 98
+ P D++ +Q+ L N++++ + L L+ M NQ+ V E +L L
Sbjct: 22 DRFPHDVEQMTQMTWLKLNDSKLEQVPDELSRCANLEHLQMAHNQLISVH-GELSDLPRL 80
Query: 99 DSISLQNNQITSMN--SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
S+ +++N + + + + + L + LS NQL E + ++ K ++LSYN I
Sbjct: 81 RSVIVRDNNLKTAGIPTDIFRMKDLTIIDLSRNQLRE-VPTNLEYAKGSIVLNLSYNNIE 139
Query: 157 KFGTRNEGKNQV-QGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
N V + ++ L L +N+++ L + + L L LS+N L
Sbjct: 140 TI------PNSVCANLIDLLFLDLSNNKLDMLPPQIRRLSMLQSLKLSNNPLNHFQLKQL 193
Query: 216 IGLDSLKMLDISHNLLTTLEETSKTF--LPALEELFVSHNSLTRLDKDFHGLPVLCKADL 273
+ SL +L +S N TL+ T + L ++ S N+L + + L L K +L
Sbjct: 194 PSMTSLSVLHMS-NTNRTLDNIPPTLDDMHNLRDVDFSENNLPIVPEALFKLRNLRKLNL 252
Query: 274 AHNNIKAINI 283
+ N I+ +N+
Sbjct: 253 SGNKIEKLNM 262
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 71/251 (28%), Positives = 124/251 (49%)
Query: 31 LVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVR 88
L + N + AL D FSQL L+ ++N+I+++ + +GL KL+ + N+I +
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 89 RDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL ++ L NQ++S++ L GL KL L+L N L + + L
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNK 206
+DLS N++ R+ +N G+ + EL L+HN++ ++ A + + L L L NK
Sbjct: 186 LDLSTNRL-----RSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 240
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGL 265
+ ++ +L+ LD++ N + ++ T +P L+ L + +N L LD K L
Sbjct: 241 ISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSSL 300
Query: 266 PVLCKADLAHN 276
L L+ N
Sbjct: 301 RSLTTVGLSGN 311
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 62/205 (30%), Positives = 98/205 (47%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 140
N IT + RD+F + L + L +NQI+++ + GL KL L LS N++
Sbjct: 71 NHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFT 130
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSR 199
L L+ +DLS+N+++ G+ + L L+ N + + L L
Sbjct: 131 QLINLQNLDLSFNQLSSLHPE-----LFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
LDLS N+LR+++ + F GL L+ L + HN LT + L +L LF+ N ++ L
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 260 KDFHGL-PVLCKADLAHNNIKAINI 283
L K DL N IKAI++
Sbjct: 246 CGMEWTWSTLEKLDLTGNEIKAIDL 270
Score = 200 (75.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 68/234 (29%), Positives = 118/234 (50%)
Query: 3 TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYANNN 59
+ L WL L++N++ ++ E L KL+ L++ N++ LP+ QL + L +L + N
Sbjct: 85 SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLIN-LQNLDLSFN 143
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+++SL L GL KLQ ++ N + + F + +L+ + L N++ S+ + +G
Sbjct: 144 QLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAG 203
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L+L HNQLT+ L L T+ L +NKI+ E + + +L
Sbjct: 204 LIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWT-----WSTLEKL 258
Query: 178 KLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L NEI+ +D + + L L + +NKL ++ L SL + +S NL
Sbjct: 259 DLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSSLRSLTTVGLSGNL 312
Score = 199 (75.1 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 68/251 (27%), Positives = 125/251 (49%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L L +N + +LE Q + S+L L ++ NQ+ + D Q +L L ++N+I L
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 66 GL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAY 123
L LQ ++ FNQ++ + + F L L ++ L++N + ++ L L +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L LS N+L + GL +LR + L +N++ K + + ++++ L LQ N+
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR-----LSSLHTLFLQWNK 240
Query: 184 IENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I NL G L +LDL+ N+++ I F + +LK+L + +N L +L+ + L
Sbjct: 241 ISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSSL 300
Query: 243 PALEELFVSHN 253
+L + +S N
Sbjct: 301 RSLTTVGLSGN 311
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 74/271 (27%), Positives = 126/271 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---AN 57
L +L L L+ N+L SL +L L KLQ L + N L +P ++LF SL +
Sbjct: 132 LINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP--VRLFWDCRSLEFLDLS 189
Query: 58 NNRITSL--DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
NR+ SL +G GL KL+ +++ NQ+T + F L +L ++ LQ N+I+++ +
Sbjct: 190 TNRLRSLARNGFA-GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGM 248
Query: 116 SGL-TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
+ L L L+ N++ L + L+ + + NK+N ++ + ++ +T +
Sbjct: 249 EWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKI--LSSLRSLTTV 306
Query: 175 FELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG---LDSLKMLDISHNLL 231
L E AL G + H+ L SPD G LD++ + NL
Sbjct: 307 -GLSGNLWECSPRVCALASWLGSFQGRWEHSIL-CHSPDHTQGEDILDAVHGFQLCWNLS 364
Query: 232 TTLEETSKTFL-PALEELFVSHNSLTRLDKD 261
TT+ + T+ P E +S +S DK+
Sbjct: 365 TTVTAMATTYRDPTTEYTKISSSSYHVGDKE 395
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 42/128 (32%), Positives = 65/128 (50%)
Query: 162 NEGKNQVQGVTN--IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
++G + V T+ L L+HN I L+ L+ L L HN++ T+ D F GL
Sbjct: 49 SQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGL 108
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
LK L +S N + L T+ T L L+ L +S N L+ L + F+GL L L N+
Sbjct: 109 YKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNS 168
Query: 278 IKAINIQL 285
++ I ++L
Sbjct: 169 LRTIPVRL 176
>UNIPROTKB|Q723K6 [details] [associations]
symbol:inlA "Internalin-A" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00746 GO:GO:0005618
GO:GO:0005576 GO:GO:0009405 eggNOG:COG4886 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0030260 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR019948
InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847 EMBL:U25445
RefSeq:YP_013078.1 ProteinModelPortal:Q723K6 STRING:Q723K6
GeneID:2798475 KEGG:lmf:LMOf2365_0471 PATRIC:20322143 KO:K13730
OMA:NLTNINW ProtClustDB:CLSK225140 Gene3D:2.60.40.1220
InterPro:IPR014755 InterPro:IPR013378 InterPro:IPR012569
Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543 Uniprot:Q723K6
Length = 800
Score = 215 (80.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 85/311 (27%), Positives = 147/311 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L + +NNN++ + L LS L L + NQ+ + ++ + L L ++N I
Sbjct: 119 LTKLVDILMNNNQIADIT-PLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNTI 176
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ + L GLT LQ + NQ+T ++ NL L+ + + +N+++ + S L+ LT L
Sbjct: 177 SDISAL-SGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI-SVLAKLTNL 231
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE---------GKNQVQ--- 169
L ++NQ+++ + + L L + L+ N++ GT NQ+
Sbjct: 232 ESLIATNNQISD--ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLA 289
Query: 170 ---GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
G+T + ELKL N+I N+ L G+ L+ L+L+ N+L ISP L +L L +
Sbjct: 290 PLSGLTKLTELKLGANQISNIS-PLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 346
Query: 227 SHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLA 286
N ++ + S L L+ LF +N ++ + L + HN I + LA
Sbjct: 347 YFNNISDISPVSS--LTKLQRLFFYNNKVSDVSS-LANLTNINWLSAGHNQISDLT-PLA 402
Query: 287 LKTQCQIFGLN 297
T+ GLN
Sbjct: 403 NLTRITQLGLN 413
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 49/182 (26%), Positives = 93/182 (51%)
Query: 75 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 134
QV + +++ + D + L+NL I+ NNQ+T + + L LTKL + +++NQ+ +
Sbjct: 77 QVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDI-TPLKDLTKLVDILMNNNQIAD- 134
Query: 135 LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGI 194
+ + L L + L N+I + ++ +TN+ L+L N I ++ AL G+
Sbjct: 135 -ITPLANLSNLTGLTLFNNQITDI-------DPLKNLTNLNRLELSSNTISDIS-ALSGL 185
Query: 195 HGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNS 254
L +L N++ + P L +L+ LDIS N ++ + +K L LE L ++N
Sbjct: 186 TSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAK--LTNLESLIATNNQ 240
Query: 255 LT 256
++
Sbjct: 241 IS 242
>ZFIN|ZDB-GENE-051113-288 [details] [associations]
symbol:ppp1r7 "protein phosphatase 1, regulatory
(inhibitor) subunit 7" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-051113-288 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00670000097777 CTD:5510 HOGENOM:HOG000211189
HOVERGEN:HBG082161 OMA:PQYRRKI OrthoDB:EOG4894MX EMBL:BC108074
IPI:IPI00501923 RefSeq:NP_001032463.1 UniGene:Dr.76971
ProteinModelPortal:Q32PL1 STRING:Q32PL1 Ensembl:ENSDART00000022356
GeneID:560323 KEGG:dre:560323 InParanoid:Q32PL1 NextBio:20883385
Bgee:Q32PL1 Uniprot:Q32PL1
Length = 345
Score = 207 (77.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 64/210 (30%), Positives = 115/210 (54%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT+L L ++ N L+ +EG L +L+K++ L + N++ ++ +++ + L L +NRI
Sbjct: 126 LTELEQLDVSFNLLRKIEG-LDSLTKVKKLFLLHNKIASI-ANLDHLTSLQMLELGSNRI 183
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
++ L L+ L+ + N+IT ++ LHNL +S+Q+N+IT + L L L
Sbjct: 184 RVIENL-DSLSSLESLFLGTNKITQLQN--LDGLHNLTVLSIQSNRITKLEG-LQNLVNL 239
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
LYLSHN + +++ + K+L T+D++ N+I K +N + +T++ E +
Sbjct: 240 RELYLSHNGIE--VMEGLENNKKLSTLDIAANRIKKI------EN-ISHLTDLKEFWMND 290
Query: 182 NEIEN---LDGALMGIHGLSRLDLSHNKLR 208
N+IEN LD L GL + L N L+
Sbjct: 291 NQIENWADLD-ELKNAKGLETVYLERNPLQ 319
Score = 189 (71.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 70/251 (27%), Positives = 126/251 (50%)
Query: 10 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 69
L N +K +E L +L L+ L + NQ+ L ++Q ++L L + N + ++GL
Sbjct: 90 LRQNLIKRIEN-LESLVSLRELDLYDNQIRKL-ENLQALTELEQLDVSFNLLRKIEGL-D 146
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 129
LTK++ + N+I + +L +L + L +N+I + + L L+ L L+L N
Sbjct: 147 SLTKVKKLFLLHNKIASIAN--LDHLTSLQMLELGSNRIRVIEN-LDSLSSLESLFLGTN 203
Query: 130 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG 189
++T+ L ++ GL L + + N+I K EG +Q + N+ EL L HN IE ++G
Sbjct: 204 KITQ--LQNLDGLHNLTVLSIQSNRITKL----EG---LQNLVNLRELYLSHNGIEVMEG 254
Query: 190 ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT---LEETSKTFLPALE 246
L LS LD++ N+++ I ++ L LK ++ N + L+E LE
Sbjct: 255 -LENNKKLSTLDIAANRIKKI--ENISHLTDLKEFWMNDNQIENWADLDELKNA--KGLE 309
Query: 247 ELFVSHNSLTR 257
+++ N L +
Sbjct: 310 TVYLERNPLQK 320
Score = 160 (61.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 73/274 (26%), Positives = 130/274 (47%)
Query: 11 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 70
+ + KSL G++ +L + V E++ ++ I L + + + RI ++GL
Sbjct: 26 DETKRKSLNGEVDSL-QAPSTVPEESPVDM--DTITLDPEEEDVDLVHCRIGKIEGL-EV 81
Query: 71 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 130
L K + ++ N I + + ++L +L + L +NQI + + L LT+L L +S N
Sbjct: 82 LLKAKTISLRQNLIKRI--ENLESLVSLRELDLYDNQIRKLEN-LQALTELEQLDVSFNL 138
Query: 131 LTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA 190
L + ++ + L +++ + L +NKI + +T++ L+L N I ++
Sbjct: 139 LRK--IEGLDSLTKVKKLFLLHNKIASIANLDH-------LTSLQMLELGSNRIRVIEN- 188
Query: 191 LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFV 250
L + L L L NK+ + D GL +L +L I N +T LE L L EL++
Sbjct: 189 LDSLSSLESLFLGTNKITQLQNLD--GLHNLTVLSIQSNRITKLEGLQN--LVNLRELYL 244
Query: 251 SHNSLTRLDKDFHGLPVLCKADLAHNNIKAI-NI 283
SHN + ++ L D+A N IK I NI
Sbjct: 245 SHNGIEVME-GLENNKKLSTLDIAANRIKKIENI 277
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/157 (29%), Positives = 83/157 (52%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L L +NR++ +E L +LS L+ L + N++ L ++ L L +NRI
Sbjct: 170 LTSLQMLELGSNRIRVIEN-LDSLSSLESLFLGTNKITQL-QNLDGLHNLTVLSIQSNRI 227
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
T L+GL + L L+ + N I ++ + +N L ++ + N+I + + +S LT L
Sbjct: 228 TKLEGL-QNLVNLRELYLSHNGIEVM--EGLENNKKLSTLDIAANRIKKIEN-ISHLTDL 283
Query: 122 AYLYLSHNQLTEFL-LDDIRGLKRLRTVDLSYNKINK 157
+++ NQ+ + LD+++ K L TV L N + K
Sbjct: 284 KEFWMNDNQIENWADLDELKNAKGLETVYLERNPLQK 320
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 161 (61.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 49/157 (31%), Positives = 79/157 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T D GL+ LR + L NKI+ T G Q + + L+L N
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKIS---TIERGA--FQDLKELERLRLNRNH 114
Query: 184 IENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L +G L RLDLS N+++ I F G +K L + +N ++ +E+ + L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNI 278
LE L +++N++TRL F+ +P L L NN+
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 151 (58.2 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 41/124 (33%), Positives = 64/124 (51%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N +K + G KL+ + + NQ+ L P Q L SL N+IT L
Sbjct: 307 LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS 366
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTKLAYLY 125
L GL LQ+ ++ N+I +R D FQ+LHNL+ +SL +N++ T + S L + ++
Sbjct: 367 LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMH 426
Query: 126 LSHN 129
L+ N
Sbjct: 427 LAQN 430
Score = 138 (53.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 40/135 (29%), Positives = 71/135 (52%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
GL L L L N++ ++E G L +L+ L + +N L+ P + L S+L L +
Sbjct: 77 GLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSE 136
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N+I ++ RG ++ +D+NQI+ + F+ L +L+ ++L NN IT ++ +S +
Sbjct: 137 NQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFN 196
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 197 HMPKLRTFRLHSNNL 211
Score = 134 (52.2 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 50/170 (29%), Positives = 86/170 (50%)
Query: 164 GKNQVQGVTN----IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
GK + TN I E++L+ N I+ + GA L R+DLS+N++ ++PD F GL
Sbjct: 288 GKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL 347
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT--RLD--KDFHGLPVLCKADLA 274
SL L + N +T L ++ L +L+ L ++ N + R+D +D H L +L D
Sbjct: 348 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-- 405
Query: 275 HNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
N ++ I A T + + + ++L NP +CD ++ + D + T
Sbjct: 406 -NKLQTI----AKGTFSPLRAIQT---MHLAQNPFICDCHLKWLADYLHT 447
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 100 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKF 158
++ N ++T + + T A L L++N+ T I + L +LR ++ S NKI
Sbjct: 516 TVDCSNQKLTKIPDHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 573
Query: 159 GTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIG 217
EG +G + E+ L N +EN+ + G+ L L L N++ + D FIG
Sbjct: 574 ---EEGA--FEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIG 628
Query: 218 LDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
L S+++L + N + T+ + L +L L
Sbjct: 629 LSSVRLLSLYDNQIATIAPGAFDTLHSLSTL 659
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 44/134 (32%), Positives = 68/134 (50%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL+ N + I+ DF GL L++L + N ++T+E + L LE L ++ N L
Sbjct: 59 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLF 118
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F G L + DL+ N I+AI + A + I L L+ N + C D +
Sbjct: 119 PELLFLGTSKLYRLDLSENQIQAIP-RKAFRGAVDIKNLQ------LDYNQISCIEDGAF 171
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 172 RALRDLEVLTLNNN 185
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00020
Identities = 40/161 (24%), Positives = 72/161 (44%)
Query: 97 NLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N + + L N IT + + +GL L L L N+++ + LK L + L+ N +
Sbjct: 56 NTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHL 115
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDD 214
F + G + ++ L L N+I+ + A G + L L +N++ I
Sbjct: 116 QLFP-----ELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA 170
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
F L L++L +++N +T L S +P L + N+L
Sbjct: 171 FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 125 (49.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 38/121 (31%), Positives = 58/121 (47%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L ++P I ++ L NN RIT D GL L+V + N+I+ + R FQ+L
Sbjct: 46 LRSVPRSIPRNTERLDLNGNNITRITKTD--FAGLRHLRVLQLMENKISTIERGAFQDLK 103
Query: 97 NLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N + L G +KL L LS NQ+ RG ++ + L YN+I
Sbjct: 104 ELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQI 163
Query: 156 N 156
+
Sbjct: 164 S 164
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 42/139 (30%), Positives = 71/139 (51%)
Query: 94 NL-HNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
NL + I L+ N I + + S KL + LS+NQ++E D +GL+ L ++ L
Sbjct: 297 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 356
Query: 152 YNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTI 210
NKI + K+ +G+ ++ L L N+I L A +H L+ L L NKL+TI
Sbjct: 357 GNKITELP-----KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 411
Query: 211 SPDDFIGLDSLKMLDISHN 229
+ F L +++ + ++ N
Sbjct: 412 AKGTFSPLRAIQTMHLAQN 430
Score = 113 (44.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 124
G+ R +T+L +D N T+V + E N +L I L NN+I+++ N S S +T+L L
Sbjct: 751 GIPRDVTELY---LDGNHFTLVPK-ELYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 806
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
LS+N+L GLK LR + L N I+
Sbjct: 807 ILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 838
Score = 111 (44.1 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 35/124 (28%), Positives = 60/124 (48%)
Query: 36 NQ-LEALPSDIQLFSQLGSLYANNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRRDEF 92
NQ L +P I ++ L NNN T L+ G+ + L +L+ N N+IT + F
Sbjct: 521 NQKLTKIPDHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF 578
Query: 93 QNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
+ ++ I L +N++ ++ + GL L L L N+++ D GL +R + L
Sbjct: 579 EGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLY 638
Query: 152 YNKI 155
N+I
Sbjct: 639 DNQI 642
Score = 97 (39.2 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + + L L LS+N+LR I P F GL SL++L + N ++ +
Sbjct: 782 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP 841
Query: 236 ETSKTFLPALEELFVSHNSL 255
E + + L AL L + N L
Sbjct: 842 EGAFSDLSALSHLAIGANPL 861
Score = 87 (35.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 28/113 (24%), Positives = 56/113 (49%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T +L N N+F T E + + + ++ +N+I +++ GA G G++ + L+ N
Sbjct: 535 TAELRLNN-NEF-TVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSN 592
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
+L + F GL+SLK L + N ++ + S L ++ L + N + +
Sbjct: 593 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATI 645
Score = 87 (35.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 31/125 (24%), Positives = 58/125 (46%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N T+ P + L ++D+S+N ++TL S + + L L +S+N L
Sbjct: 756 VTELYLDGNHF-TLVPKELYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 814
Query: 257 RLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ + F GL L L N+I + + L++ + + NP+ CD +M
Sbjct: 815 CIPPRTFDGLKSLRLLSLHGNDISVV-------PEGAFSDLSALSHLAIGANPLYCDCNM 867
Query: 316 RAVID 320
+ + D
Sbjct: 868 QWLSD 872
Score = 86 (35.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN LE G L +L+ + N++ + + + + + +NR+ ++
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENV 597
Query: 65 DG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
+ +GL L+ + N+I+ V D F L ++ +SL +NQI ++ + L L+
Sbjct: 598 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLS 657
Query: 123 YLYLSHN 129
L L N
Sbjct: 658 TLNLLAN 664
Score = 80 (33.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 28/109 (25%), Positives = 50/109 (45%)
Query: 176 ELKLQHNEIENLD--GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
EL+L +NE L+ G + L +++ S+NK+ I F G + + ++ N L
Sbjct: 537 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLEN 596
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
++ L +L+ L + N ++ + D F GL + L N I I
Sbjct: 597 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATI 645
Score = 77 (32.2 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 26/97 (26%), Positives = 47/97 (48%)
Query: 162 NEG-KNQVQGVT-NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
N+G K +G+ ++ EL L N + L L+ +DLS+N++ T+S F +
Sbjct: 742 NKGLKVLPKGIPRDVTELYLDGNHFTLVPKELYNYKHLTLIDLSNNRISTLSNQSFSNMT 801
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
L L +S+N L + + L +L L + N ++
Sbjct: 802 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 838
Score = 76 (31.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 28/109 (25%), Positives = 45/109 (41%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
LYL N T + ++ K L +DLS N+I+ ++ +T + L L +N
Sbjct: 759 LYLDGNHFT-LVPKELYNYKHLTLIDLSNNRISTLSNQS-----FSNMTQLLTLILSYNR 812
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ + G+ L L L N + + F L +L L I N L
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPL 861
Score = 67 (28.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD--IQLFS-QLGSLYA 56
G +N + L +NRL++++ ++ L L+ L++ N++ + +D I L S +L SLY
Sbjct: 580 GAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLY- 638
Query: 57 NNNRITSLDGLLRGLTKLQVFNM 79
+N T G L L N+
Sbjct: 639 DNQIATIAPGAFDTLHSLSTLNL 661
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 83/300 (27%), Positives = 145/300 (48%)
Query: 25 LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFN 82
L +L+ L ++ NQ+ +L P + S+L LY NN + +L G L L KL++ + N
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGN 141
Query: 83 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRG 141
+I + R F+ L +L + L N + ++ ++ + L L YL+L N++ +
Sbjct: 142 EIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQ 201
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRL 200
L +LR ++LS N++ + V + ++ L L N +++L + + L L
Sbjct: 202 LGKLRFLNLSANELQP--SLRHAATFVP-LRSLSTLILSANSLQHLGPRVFQHLPRLGLL 258
Query: 201 DLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK 260
LS N+L ++P+ F GL++L+ L + N L L T L +LE L +S N L+ L
Sbjct: 259 SLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHP 318
Query: 261 DFHGLPV-LCKADLAHNNIKAINIQLALKTQCQIFGLNSTL-RIYLEGNPVLCDDSMRAV 318
G L + L N + A++ IF + L R+ L+GN CD +R +
Sbjct: 319 ATFGHQGRLRELSLRDNALSALS--------GDIFAASPALYRLDLDGNGWTCDCRLRGL 370
Score = 185 (70.2 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 69/236 (29%), Positives = 114/236 (48%)
Query: 77 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFL 135
+++ N IT + +F L L + LQ NQI S++ + L++L LYL +N L +
Sbjct: 64 YSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALV 123
Query: 136 LDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIH 195
+ L++LR + Y N+ G + G +G+ ++ +L+L N + L A+
Sbjct: 124 PGTLAPLRKLRIL---YANGNEIGRLSRGS--FEGLESLVKLRLDGNVLGALPDAVFAPL 178
Query: 196 G-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP--ALEELFVSH 252
G L L L N++R + + F L L+ L++S N L + TF+P +L L +S
Sbjct: 179 GNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSA 238
Query: 253 NSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGN 307
NSL L + F LP L L+ N + LA + +GL + + LEGN
Sbjct: 239 NSLQHLGPRVFQHLPRLGLLSLSGNQLT----HLAPEA---FWGLEALRELRLEGN 287
Score = 181 (68.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 75/271 (27%), Positives = 120/271 (44%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNN 59
L+ L L+L NN L++L G L L KL++L N++ L + L L + N
Sbjct: 106 LSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGN 165
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSLS- 116
+ +L D + L L +++ N+I + ++ F L L ++L N++ S+ + +
Sbjct: 166 VLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATF 225
Query: 117 -GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L L+ L LS N L + L RL + LS N++ G+ +
Sbjct: 226 VPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPE-----AFWGLEALR 280
Query: 176 ELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
EL+L+ N + L L+ +H L LDLS N+L + P F L+ L + N L+ L
Sbjct: 281 ELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSAL 340
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKDFHGL 265
PAL L + N T D GL
Sbjct: 341 SGDIFAASPALYRLDLDGNGWT-CDCRLRGL 370
>DICTYBASE|DDB_G0278509 [details] [associations]
symbol:DDB_G0278509 "MLK family protein kinase
DDB_G0278509" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 dictyBase:DDB_G0278509
GO:GO:0005524 EMBL:AAFI02000023 SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
ProtClustDB:CLSZ2846780 RefSeq:XP_642407.1
ProteinModelPortal:Q54XZ5 EnsemblProtists:DDB0220138 GeneID:8621612
KEGG:ddi:DDB_G0278509 OMA:LEIPENC Uniprot:Q54XZ5
Length = 1248
Score = 217 (81.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 71/262 (27%), Positives = 130/262 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L L++N L + +LG LS L+ L + N L+ P+ L++ L L +NN+I
Sbjct: 456 LKHLTILDLSHNNLHEICRELGNLSFLRELYLSNNSLKKFPTTGNLYN-LKKLILDNNQI 514
Query: 62 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
T++ + L +LQ ++ FN+I + + + NN S +
Sbjct: 515 TTIPIECVEPLIQLQTLDLSFNKIGTITSSTTTT--TTTTTTNNNNNNGGGGSIYQKMKN 572
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L LSHN+L E + +R L +L ++ + YN+I+ + V ++ + +L +
Sbjct: 573 LKQLNLSHNELQE-IPSSLRHLSKLHSLSIDYNQISVLPDK-----VVASLSRLAKLTIS 626
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
+N+I+ L A+ + L L+ S+N + + PD L +LK L++++N L L ++
Sbjct: 627 NNKIKQLPFAINNLSSLIELNASNNVIELL-PDSICYLSNLKKLNLNNNNLKELP-SNIG 684
Query: 241 FLPALEELFVSHNSLTRLDKDF 262
FL L +L + +N ++ L F
Sbjct: 685 FLTKLVDLQLYNNQISSLPISF 706
Score = 211 (79.3 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 73/280 (26%), Positives = 129/280 (46%)
Query: 29 QLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 87
+++ + N ++++P D S L L NN ++ + + L L + ++ N + +
Sbjct: 413 KIIDLSFNNIKSIPLDAFTNISNLEQLIMFNNNLSDVPSSIEFLKHLTILDLSHNNLHEI 472
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
R E NL L + L NN + ++ L L L L +NQ+T ++ + L +L+T
Sbjct: 473 CR-ELGNLSFLRELYLSNNSLKKFPTT-GNLYNLKKLILDNNQITTIPIECVEPLIQLQT 530
Query: 148 VDLSYNKINKFG----------TRNEGKNQ------VQGVTNIFELKLQHNEIENLDGAL 191
+DLS+NKI T N N Q + N+ +L L HNE++ + +L
Sbjct: 531 LDLSFNKIGTITSSTTTTTTTTTTNNNNNNGGGGSIYQKMKNLKQLNLSHNELQEIPSSL 590
Query: 192 MGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKTFLPALEELFV 250
+ L L + +N++ ++ PD + L L L IS+N + L L +L EL
Sbjct: 591 RHLSKLHSLSIDYNQI-SVLPDKVVASLSRLAKLTISNNKIKQLPFAINN-LSSLIELNA 648
Query: 251 SHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
S+N + L L L K +L +NN+K + + T+
Sbjct: 649 SNNVIELLPDSICYLSNLKKLNLNNNNLKELPSNIGFLTK 688
Score = 196 (74.1 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 71/285 (24%), Positives = 140/285 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+++L L + NN L + + L L +L + N L + ++ S L LY +NN +
Sbjct: 433 ISNLEQLIMFNNNLSDVPSSIEFLKHLTILDLSHNNLHEICRELGNLSFLRELYLSNNSL 492
Query: 62 TSLD--GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
G L L KL +D NQIT + + + L L ++ L N+I ++ SS + T
Sbjct: 493 KKFPTTGNLYNLKKLI---LDNNQITTIPIECVEPLIQLQTLDLSFNKIGTITSSTTTTT 549
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
++N + + +K L+ ++LS+N++ + + ++ ++ + L +
Sbjct: 550 TTTTTNNNNNNGGGGSI--YQKMKNLKQLNLSHNELQEI------PSSLRHLSKLHSLSI 601
Query: 180 QHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
+N+I L D + + L++L +S+NK++ + P L SL L+ S+N++ L + S
Sbjct: 602 DYNQISVLPDKVVASLSRLAKLTISNNKIKQL-PFAINNLSSLIELNASNNVIELLPD-S 659
Query: 239 KTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI 283
+L L++L +++N+L L + L L L +N I ++ I
Sbjct: 660 ICYLSNLKKLNLNNNNLKELPSNIGFLTKLVDLQLYNNQISSLPI 704
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 75/278 (26%), Positives = 129/278 (46%)
Query: 75 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 134
++ ++ FN I + D F N+ NL+ + + NN ++ + SS+ L L L LSHN L E
Sbjct: 413 KIIDLSFNNIKSIPLDAFTNISNLEQLIMFNNNLSDVPSSIEFLKHLTILDLSHNNLHE- 471
Query: 135 LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMG 193
+ ++ L LR + LS N + KF T + N+ +L L +N+I + +
Sbjct: 472 ICRELGNLSFLRELYLSNNSLKKFPTTGN-------LYNLKKLILDNNQITTIPIECVEP 524
Query: 194 IHGLSRLDLSHNKLRTISPDD---------------------FIGLDSLKMLDISHNLLT 232
+ L LDLS NK+ TI+ + + +LK L++SHN L
Sbjct: 525 LIQLQTLDLSFNKIGTITSSTTTTTTTTTTNNNNNNGGGGSIYQKMKNLKQLNLSHNELQ 584
Query: 233 TLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQC 291
+ +S L L L + +N ++ L DK L L K +++N IK + A+
Sbjct: 585 EIP-SSLRHLSKLHSLSIDYNQISVLPDKVVASLSRLAKLTISNNKIK--QLPFAINNLS 641
Query: 292 QIFGLNSTLRIYLEGNPVLCDDSMRAVIDAME-TINNN 328
+ LN++ + +E L DS+ + + + +NNN
Sbjct: 642 SLIELNASNNV-IE----LLPDSICYLSNLKKLNLNNN 674
Score = 141 (54.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 41/162 (25%), Positives = 82/162 (50%)
Query: 46 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 105
Q L L ++N + + LR L+KL ++D+NQI+++ +L L +++ N
Sbjct: 568 QKMKNLKQLNLSHNELQEIPSSLRHLSKLHSLSIDYNQISVLPDKVVASLSRLAKLTISN 627
Query: 106 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 165
N+I + +++ L+ L L S+N + E L D I L L+ ++L+ N + + + N G
Sbjct: 628 NKIKQLPFAINNLSSLIELNASNNVI-ELLPDSICYLSNLKKLNLNNNNLKELPS-NIGF 685
Query: 166 NQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+T + +L+L +N+I +L + + + + N L
Sbjct: 686 -----LTKLVDLQLYNNQISSLPISFLKCRSIREIGTDGNPL 722
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 214 (80.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 83/300 (27%), Positives = 145/300 (48%)
Query: 25 LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFN 82
L +L+ L ++ NQ+ +L P + S+L LY NN + +L G L L KL++ + N
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 83 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRG 141
+I + R F+ L +L + L N + ++ ++ + L L YL+L N++ +
Sbjct: 142 EIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQ 201
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRL 200
L +LR ++LS N++ + V + ++ L L N +++L + + L L
Sbjct: 202 LGKLRFLNLSANELQP--SLRHAATFVP-LRSLSTLILSANSLQHLGPRVFQHLPRLGLL 258
Query: 201 DLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK 260
LS N+L ++P+ F GL++L+ L + N L L T L +LE L +S N L+ L
Sbjct: 259 SLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHP 318
Query: 261 DFHGLPV-LCKADLAHNNIKAINIQLALKTQCQIFGLNSTL-RIYLEGNPVLCDDSMRAV 318
G L + L N + A++ IF + L R+ L+GN CD +R +
Sbjct: 319 ATFGHQGRLRELSLRDNALSALS--------GDIFAASPALYRLDLDGNGWTCDCRLRGL 370
Score = 183 (69.5 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 69/236 (29%), Positives = 113/236 (47%)
Query: 77 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFL 135
+++ N IT + +F L L + LQ NQI S++ + L++L LYL +N L
Sbjct: 64 YSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALA 123
Query: 136 LDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIH 195
+ L++LR + Y N+ G + G +G+ ++ +L+L N + L A+
Sbjct: 124 PGTLAPLRKLRIL---YANGNEIGRLSRGS--FEGLESLVKLRLDGNVLGALPDAVFAPL 178
Query: 196 G-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP--ALEELFVSH 252
G L L L N++R + + F L L+ L++S N L + TF+P +L L +S
Sbjct: 179 GNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSA 238
Query: 253 NSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGN 307
NSL L + F LP L L+ N + LA + +GL + + LEGN
Sbjct: 239 NSLQHLGPRVFQHLPRLGLLSLSGNQLT----HLAPEA---FWGLEALRELRLEGN 287
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 75/271 (27%), Positives = 120/271 (44%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNN 59
L+ L L+L NN L++L G L L KL++L N++ L + L L + N
Sbjct: 106 LSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGN 165
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSLS- 116
+ +L D + L L +++ N+I + ++ F L L ++L N++ S+ + +
Sbjct: 166 VLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATF 225
Query: 117 -GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L L+ L LS N L + L RL + LS N++ G+ +
Sbjct: 226 VPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPE-----AFWGLEALR 280
Query: 176 ELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
EL+L+ N + L L+ +H L LDLS N+L + P F L+ L + N L+ L
Sbjct: 281 ELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSAL 340
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKDFHGL 265
PAL L + N T D GL
Sbjct: 341 SGDIFAASPALYRLDLDGNGWT-CDCRLRGL 370
>TAIR|locus:2005507 [details] [associations]
symbol:ER "ERECTA" species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0048281
"inflorescence morphogenesis" evidence=IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=IMP] [GO:0042742
"defense response to bacterium" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0050832 "defense response to
fungus" evidence=IMP] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA;IMP] [GO:0001558 "regulation of cell growth"
evidence=IGI;IMP] [GO:0009965 "leaf morphogenesis"
evidence=RCA;IMP] [GO:0010148 "transpiration" evidence=IMP]
[GO:0030155 "regulation of cell adhesion" evidence=IMP] [GO:0051302
"regulation of cell division" evidence=IGI;IMP] [GO:0009664
"plant-type cell wall organization" evidence=IMP] [GO:0008356
"asymmetric cell division" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0031540 "regulation of
anthocyanin biosynthetic process" evidence=RCA] [GO:0019199
"transmembrane receptor protein kinase activity" evidence=ISS]
[GO:2000027 "regulation of organ morphogenesis" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030155 GO:GO:0050832
GO:GO:0001558 eggNOG:COG0515 GO:GO:0042742 SUPFAM:SSF56112
GO:GO:0004674 GO:GO:0010148 GO:GO:0019199 GO:GO:0009965
GO:GO:0009944 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
GO:GO:0048281 GO:GO:0051302 GO:GO:0010103 EMBL:D83257 EMBL:U47029
EMBL:AC004484 EMBL:AY035110 EMBL:FJ708701 EMBL:AK221886
EMBL:EF598332 EMBL:EF598333 EMBL:EF598334 EMBL:EF598335
EMBL:EF598336 EMBL:EF598337 EMBL:EF598338 EMBL:EF598339
EMBL:EF598340 EMBL:EF598341 EMBL:EF598342 EMBL:EF598343
EMBL:EF598344 EMBL:EF598345 EMBL:EF598346 EMBL:EF598347
EMBL:EF598348 EMBL:EF598349 EMBL:EF598350 EMBL:EF598351
EMBL:EF598352 EMBL:EF598353 EMBL:EF598354 IPI:IPI00532140
PIR:B84659 RefSeq:NP_180201.1 UniGene:At.10804 HSSP:P58822
ProteinModelPortal:Q42371 SMR:Q42371 STRING:Q42371 PaxDb:Q42371
PRIDE:Q42371 EnsemblPlants:AT2G26330.1 GeneID:817173
KEGG:ath:AT2G26330 GeneFarm:2563 TAIR:At2g26330 InParanoid:Q42371
OMA:PSSDYCV PhylomeDB:Q42371 ProtClustDB:CLSN2687327 GO:GO:0009664
GO:GO:2000027 Uniprot:Q42371
Length = 976
Score = 215 (80.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 71/230 (30%), Positives = 112/230 (48%)
Query: 2 LTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNN 59
++ L++L LN+N L + +LG L+ L L + N LE +P + + L SL + N
Sbjct: 330 MSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSSCTNLNSLNVHGN 389
Query: 60 RIT-SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+ + ++ + L + N+ N I E + NLD++ L NN+I + SSL
Sbjct: 390 KFSGTIPRAFQKLESMTYLNLSSNNIKGPIPVELSRIGNLDTLDLSNNKINGIIPSSLGD 449
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L L + LS N +T + D L+ + +DLS N I+ G E NQ+Q NI L
Sbjct: 450 LEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDIS--GPIPEELNQLQ---NIILL 504
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKL----------RTISPDDFIG 217
+L++N + G+L L+ L++SHN L SPD FIG
Sbjct: 505 RLENNNLTGNVGSLANCLSLTVLNVSHNNLVGDIPKNNNFSRFSPDSFIG 554
Score = 170 (64.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 71/277 (25%), Positives = 132/277 (47%)
Query: 8 LFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRIT-SL 64
L L+ N+L + +G L ++ L ++ NQL +PS I L L L + N ++ S+
Sbjct: 241 LDLSYNQLTGEIPFDIGFL-QVATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLSGSI 299
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAY 123
+L LT + + N++T E N+ L + L +N +T + L LT L
Sbjct: 300 PPILGNLTFTEKLYLHSNKLTGSIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFD 359
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L +++N L + D + L ++++ NK + GT +++ +T L L N
Sbjct: 360 LNVANNDLEGPIPDHLSSCTNLNSLNVHGNKFS--GTIPRAFQKLESMTY---LNLSSNN 414
Query: 184 IEN-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I+ + L I L LDLS+NK+ I P L+ L +++S N +T + L
Sbjct: 415 IKGPIPVELSRIGNLDTLDLSNNKINGIIPSSLGDLEHLLKMNLSRNHITGVVPGDFGNL 474
Query: 243 PALEELFVSHNSLTR-LDKDFHGLPVLCKADLAHNNI 278
++ E+ +S+N ++ + ++ + L + L +NN+
Sbjct: 475 RSIMEIDLSNNDISGPIPEELNQLQNIILLRLENNNL 511
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 64/283 (22%), Positives = 130/283 (45%)
Query: 1 GLTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANN 58
G + L L N+L + +G + L +L + N L ++P + + LY ++
Sbjct: 257 GFLQVATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLSGSIPPILGNLTFTEKLYLHS 316
Query: 59 NRIT-SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLS 116
N++T S+ L ++KL ++ N +T E L +L +++ NN + + LS
Sbjct: 317 NKLTGSIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLS 376
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
T L L + N+ + + + L+ + ++LS N I + ++ + N+
Sbjct: 377 SCTNLNSLNVHGNKFSGTIPRAFQKLESMTYLNLSSNNI-----KGPIPVELSRIGNLDT 431
Query: 177 LKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L +N+I + + +G + L +++LS N + + P DF L S+ +D+S+N ++
Sbjct: 432 LDLSNNKINGIIPSSLGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDISGPI 491
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
L + L + +N+LT L +++HNN+
Sbjct: 492 PEELNQLQNIILLRLENNNLTGNVGSLANCLSLTVLNVSHNNL 534
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 75/294 (25%), Positives = 129/294 (43%)
Query: 2 LTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEA-LPSDI---QLFSQLGSLYA 56
L L L L NN+L + L + L++L + QN+L +P I ++ LG
Sbjct: 139 LKQLEQLILKNNQLIGPIPSTLSQIPNLKILDLAQNKLSGEIPRLIYWNEVLQYLG--LR 196
Query: 57 NNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
NN + ++ L LT L F++ N +T + N + L NQ+T
Sbjct: 197 GNNLVGNISPDLCQLTGLWYFDVRNNSLTGSIPETIGNCTAFQVLDLSYNQLTGEIPFDI 256
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG-VTNIF 175
G ++A L L NQL+ + I ++ L +DLS N ++ G+ + G +T
Sbjct: 257 GFLQVATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLS--GSIPP----ILGNLTFTE 310
Query: 176 ELKLQHNEIE-NLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
+L L N++ ++ L + L L+L+ N L P + L L L++++N L
Sbjct: 311 KLYLHSNKLTGSIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGP 370
Query: 235 EETSKTFLPALEELFVSHNSLT-RLDKDFHGLPVLCKADLAHNNIKA-INIQLA 286
+ L L V N + + + F L + +L+ NNIK I ++L+
Sbjct: 371 IPDHLSSCTNLNSLNVHGNKFSGTIPRAFQKLESMTYLNLSSNNIKGPIPVELS 424
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 211 (79.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 90/344 (26%), Positives = 150/344 (43%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL L L + + +L + L+ L L + N LEALP + Q + L SL+
Sbjct: 95 GLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQG 154
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
N++ +L L + LT L+ N+ N + + + F L +L ++ L NN ++ + + G
Sbjct: 155 NQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFG 214
Query: 118 -LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L+L N ++E L L + L N I + + N+
Sbjct: 215 KLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPL-----SIFASLGNLTF 269
Query: 177 LKLQHNEIENLDGALMGIHG--LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
L LQ N + L L H L L L+HN+L T++ F L +L+ L +S+N +T L
Sbjct: 270 LSLQWNMLRVLPAGLFA-HTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHL 328
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
L L +L++ N+LT L F L L L+ N + + + T +
Sbjct: 329 PAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGI-FDTNYNL 387
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETIC 337
F L L GNP CD + + + ++ + ++ +T C
Sbjct: 388 FNLA------LHGNPWQCDCHLAYLFNWLQQYTDRL-LNIQTYC 424
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 71/280 (25%), Positives = 124/280 (44%)
Query: 28 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQ 83
+Q + +L +P DI +++ ++ + T+L+ G LTK+ N Q
Sbjct: 30 VQEVFCSDEELATVPLDIPPYTK-NIIFVETS-FTTLETRAFGSNPNLTKVVFLN---TQ 84
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDI-RG 141
+ R D F L L+ + + + ++++++ S LT L L L+ N L E L + + +
Sbjct: 85 LCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNML-EALPEGLFQH 143
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRL 200
L L ++ L N++ R Q +T++ L L N + L L + L L
Sbjct: 144 LAALESLHLQGNQLQALPRR-----LFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTL 198
Query: 201 DLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK 260
LS+N L + F L SL+ L + N ++ L + L LE L++ N++T L
Sbjct: 199 KLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPL 258
Query: 261 D-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNST 299
F L L L N ++ + L T C + GL+ T
Sbjct: 259 SIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLV-GLSLT 297
>RGD|1359464 [details] [associations]
symbol:Lrg1 "leucine-rich alpha-2-glycoprotein 1" species:10116
"Rattus norvegicus" [GO:0005615 "extracellular space" evidence=ISO]
[GO:0050873 "brown fat cell differentiation" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 RGD:1359464
CTD:116844 HOVERGEN:HBG000045 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 EMBL:BC088434 IPI:IPI00393521
RefSeq:NP_001009717.1 UniGene:Rn.17847 ProteinModelPortal:Q5I0E1
GeneID:367455 KEGG:rno:367455 NextBio:691280 Genevestigator:Q5I0E1
Uniprot:Q5I0E1
Length = 332
Score = 205 (77.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 79/258 (30%), Positives = 129/258 (50%)
Query: 31 LVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVR 88
L +E + L LP+ +Q L L+ ++NR+ L GLL + +L+V ++ N + +
Sbjct: 56 LSVEFSSLTQLPAAALQGCPGLQELHLSSNRLQELSPGLLAPVPRLRVLDLTRNALRSLP 115
Query: 89 RDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F++ L+++ L+ NQ+ ++ L GL L YL L+ N+L + L L T
Sbjct: 116 PGLFRSSAALNTLVLRENQLQEASARWLQGLDALGYLDLAENRLRSLPARLLANLGALHT 175
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHG-LSRLDLSHNK 206
+DL +N + EG ++G + L L+ N ++ L+ L+ L L L+ N+
Sbjct: 176 LDLGHNLLESLP---EGF--LRGPRRLQRLHLEGNRLQRLEAGLLAPQPFLGVLFLNDNQ 230
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL--PA--LEELF-VSHNSLTRLDKD 261
L ++ D F GL L MLD+S+N L++ FL P +++ F VSHN DKD
Sbjct: 231 LTAVAADSFRGLKQLDMLDLSNNSLSSTPPGLWAFLGRPTRDMQDGFDVSHNPWV-CDKD 289
Query: 262 FHGLPVLCKADLAHNNIK 279
L LC+ LA N K
Sbjct: 290 ---LVDLCRW-LAANRHK 303
Score = 161 (61.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 57/207 (27%), Positives = 97/207 (46%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLL 136
+++F+ +T + Q L + L +N++ ++ L + + +L L L+ N L
Sbjct: 57 SVEFSSLTQLPAAALQGCPGLQELHLSSNRLQELSPGLLAPVPRLRVLDLTRNALRSLPP 116
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHG 196
R L T+ L N++ + R +QG+ + L L N + +L L+ G
Sbjct: 117 GLFRSSAALNTLVLRENQLQEASAR-----WLQGLDALGYLDLAENRLRSLPARLLANLG 171
Query: 197 -LSRLDLSHNKLRTISPDDFI-GLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNS 254
L LDL HN L ++ P+ F+ G L+ L + N L LE P L LF++ N
Sbjct: 172 ALHTLDLGHNLLESL-PEGFLRGPRRLQRLHLEGNRLQRLEAGLLAPQPFLGVLFLNDNQ 230
Query: 255 LTRLDKD-FHGLPVLCKADLAHNNIKA 280
LT + D F GL L DL++N++ +
Sbjct: 231 LTAVAADSFRGLKQLDMLDLSNNSLSS 257
Score = 154 (59.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 50/156 (32%), Positives = 74/156 (47%)
Query: 5 LNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRIT 62
L L L N L+SL G + + L LV+ +NQL EA +Q LG L NR+
Sbjct: 101 LRVLDLTRNALRSLPPGLFRSSAALNTLVLRENQLQEASARWLQGLDALGYLDLAENRLR 160
Query: 63 SLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK- 120
SL LL L L ++ N + + + L + L+ N++ + + L
Sbjct: 161 SLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGNRLQRLEAGLLAPQPF 220
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
L L+L+ NQLT D RGLK+L +DLS N ++
Sbjct: 221 LGVLFLNDNQLTAVAADSFRGLKQLDMLDLSNNSLS 256
Score = 144 (55.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 42/113 (37%), Positives = 60/113 (53%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL L +L L NRL+SL +L L L L + N LE+LP ++ +L L+
Sbjct: 145 GLDALGYLDLAENRLRSLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEG 204
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 110
NR+ L+ GLL L V ++ NQ+T V D F+ L LD + L NN ++S
Sbjct: 205 NRLQRLEAGLLAPQPFLGVLFLNDNQLTAVAADSFRGLKQLDMLDLSNNSLSS 257
>UNIPROTKB|Q96NW7 [details] [associations]
symbol:LRRC7 "Leucine-rich repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
Pfam:PF00595 Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001478
PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228 GO:GO:0005886
GO:GO:0005737 GO:GO:0014069 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 SUPFAM:SSF50156 InterPro:IPR025875 Pfam:PF12799
HOVERGEN:HBG052305 EMBL:AF434715 EMBL:AF498274 EMBL:AL158840
EMBL:AL391728 EMBL:AL359412 EMBL:AL157948 EMBL:AL117353
EMBL:CR749629 EMBL:AB037786 IPI:IPI00384313 IPI:IPI00426267
IPI:IPI00426269 RefSeq:NP_065845.1 UniGene:Hs.479658
ProteinModelPortal:Q96NW7 SMR:Q96NW7 IntAct:Q96NW7 MINT:MINT-223197
STRING:Q96NW7 PhosphoSite:Q96NW7 DMDM:50401129 PaxDb:Q96NW7
PRIDE:Q96NW7 Ensembl:ENST00000035383 Ensembl:ENST00000310961
GeneID:57554 KEGG:hsa:57554 UCSC:uc001dep.3 CTD:57554
GeneCards:GC01P069998 HGNC:HGNC:18531 HPA:HPA002314 HPA:HPA005625
MIM:614453 neXtProt:NX_Q96NW7 PharmGKB:PA134879588
InParanoid:Q96NW7 PhylomeDB:Q96NW7 ChiTaRS:LRRC7 GenomeRNAi:57554
NextBio:64030 ArrayExpress:Q96NW7 Bgee:Q96NW7 CleanEx:HS_LRRC7
Genevestigator:Q96NW7 Uniprot:Q96NW7
Length = 1537
Score = 217 (81.4 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 79/277 (28%), Positives = 131/277 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L+ L I N L LP+ I L L + N +
Sbjct: 48 LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L + N I+ + D F L NL + L + + + ++ L KL L
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLP-DGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N L + L + L +L +DL N N+FG E +Q+Q N+ EL + +N +
Sbjct: 167 ELRENHL-KTLPKSMHKLAQLERLDLG-N--NEFGELPEVLDQIQ---NLRELWMDNNAL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ L G++ + L LD+S N++ T+ D G ++L+ L +S N+L L + S L
Sbjct: 220 QVLPGSIGKLKMLVYLDMSKNRIETVDMD-ISGCEALEDLLLSSNMLQQLPD-SIGLLKK 277
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L L V N LT L L +L + D + N ++++
Sbjct: 278 LTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESL 314
Score = 213 (80.0 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 78/281 (27%), Positives = 127/281 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+LN+ L+ L G L KL++L + +N L+ LP + +QL L NN
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L +L + L+ MD N + V L L + + N+I +++ +SG L
Sbjct: 197 GELPEVLDQIQNLRELWMDNNAL-QVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEAL 255
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L + L D I LK+L T+ + N++ N + ++ + E
Sbjct: 256 EDLLLSSNMLQQ-LPDSIGLLKKLTTLKVDDNQLTML------PNTIGNLSLLEEFDCSC 308
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-EETSKT 240
NE+E+L + +H L L + N L + P + ++ ++ + N L L EE +
Sbjct: 309 NELESLPSTIGYLHSLRTLAVDENFLPEL-PREIGSCKNVTVMSLRSNKLEFLPEEIGQ- 366
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ L L +S N L L F L L L+ N KA+
Sbjct: 367 -MQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406
Score = 179 (68.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 60/211 (28%), Positives = 101/211 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+ +L L+++NN L+ L G +G L L L + +N++E + DI L L ++N +
Sbjct: 206 IQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNML 265
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + L KL +D NQ+TM+ + NL L+ N++ S+ S++ L L
Sbjct: 266 QQLPDSIGLLKKLTTLKVDDNQLTMLP-NTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 324
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L + N L E L +I K + + L NK+ +F G+ Q V N L
Sbjct: 325 RTLAVDENFLPE-LPREIGSCKNVTVMSLRSNKL-EFLPEEIGQMQKLRVLN-----LSD 377
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISP 212
N ++NL + + L+ L LS N+ + + P
Sbjct: 378 NRLKNLPFSFTKLKELAALWLSDNQSKALIP 408
Score = 163 (62.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 65/296 (21%), Positives = 123/296 (41%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L L KL++ + N + + + L L+ + L NN+ + L + L
Sbjct: 151 EFLPANFGRLVKLRILELRENHLKTLPKS-MHKLAQLERLDLGNNEFGELPEVLDQIQNL 209
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L++ +N L + L I LK L +D+S N+I + G + +L L
Sbjct: 210 RELWMDNNAL-QVLPGSIGKLKMLVYLDMSKNRIETVDM------DISGCEALEDLLLSS 262
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++ L ++ + L+ L + N+L T+ P+ L L+ D S N L +L T +
Sbjct: 263 NMLQQLPDSIGLLKKLTTLKVDDNQL-TMLPNTIGNLSLLEEFDCSCNELESLPSTIG-Y 320
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L +L L V N L L ++ + L N ++ + ++ + ++ L+
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLS 376
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 46/154 (29%), Positives = 74/154 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G L L L++N L+ L +G L KL L ++ NQL LP+ I S L + N
Sbjct: 251 GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNE 310
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ SL + L L+ +D N + + R E + N+ +SL++N++ + + + K
Sbjct: 311 LESLPSTIGYLHSLRTLAVDENFLPELPR-EIGSCKNVTVMSLRSNKLEFLPEEIGQMQK 369
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L L LS N+L + LK L + LS N+
Sbjct: 370 LRVLNLSDNRLKNLPFSFTK-LKELAALWLSDNQ 402
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 157 (60.3 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 52/169 (30%), Positives = 82/169 (48%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T +D GLK+LR + L N+I G G + + L+L N+
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQI---GAVERGA--FDDMKELERLRLNRNQ 120
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L LSRLDLS N L+ + F G LK L + N ++ +EE + L
Sbjct: 121 LQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
LE L +++N++T + F+ +P L L H+N + LA +Q
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL-HSNHLFCDCHLAWLSQ 228
Score = 153 (58.9 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 52/156 (33%), Positives = 76/156 (48%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + + NQ+ E P Q L SL N+IT L G
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRG 375
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLY 125
+ GL LQ+ ++ N+I +R D FQ+L NL +SL +N+I S+ + + L + L+
Sbjct: 376 VFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLH 435
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
L+ N F+ D LK L L N I G R
Sbjct: 436 LAQNP---FICDC--NLKWLADF-LRTNPIETTGAR 465
Score = 151 (58.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 84/337 (24%), Positives = 148/337 (43%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L+ L L+ N L+++ + + L+ L +++NQ+ + + L L NNN IT
Sbjct: 135 LSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNIT 194
Query: 63 SLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS--LQNNQITSMNSSLSGLT 119
++ + KL+ F + N + F + H L +S L+ + + SG
Sbjct: 195 TIPVSSFNHMPKLRTFRLHSNHL-------FCDCH-LAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG--KNQVQGVTNI--- 174
L L ++ Q +EF ++ LS + + G + +G+T I
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLTAIPAN 306
Query: 175 -----FELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
E++L+ N I+++ GA L R+DLS+N++ I+PD F GL SL L +
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLAL 287
N +T L L L+ L ++ N + + D F L L L N I++ LA
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS----LAK 422
Query: 288 KTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
T L + ++L NP +CD +++ + D + T
Sbjct: 423 GT---FTSLRAIQTLHLAQNPFICDCNLKWLADFLRT 456
Score = 139 (54.0 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANN 58
GL L L L N++ ++E G + +L+ L + +NQL+ LP + +Q L L +
Sbjct: 83 GLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSE 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N + ++ RG T L+ +D NQI+ + F+ L L+ ++L NN IT++ SS +
Sbjct: 143 NSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN 202
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 203 HMPKLRTFRLHSNHL 217
Score = 136 (52.9 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 37/127 (29%), Positives = 70/127 (55%)
Query: 124 LYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L++N+++ + + L L+ ++LS NK+++ +G +G T++ EL L N
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEI---EDGT--FEGATSVSELHLTAN 599
Query: 183 EIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
++E++ G G+ GL L L +N++ I D F GL ++++L + N +TT+ +
Sbjct: 600 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 659
Query: 242 LPALEEL 248
L AL L
Sbjct: 660 LQALSTL 666
Score = 131 (51.2 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 31 LVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMV 87
L + N++ L + + S L + +NN+++ + DG G T + ++ NQ+ V
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
R F+ L L ++ L+NN+I+ + N S +GL + L L N +T L+ L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 664
Query: 147 TVDLSYNKIN 156
T++L N N
Sbjct: 665 TLNLLANPFN 674
Score = 119 (46.9 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 36/127 (28%), Positives = 64/127 (50%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN + LE G LS L+ + + N++ + + + + L+ N++ S+
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 65 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
G+ RGL L+ + N+I+ + D F L N+ +SL +N IT+++ + L L+
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 664
Query: 123 YLYLSHN 129
L L N
Sbjct: 665 TLNLLAN 671
Score = 111 (44.1 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L LN N + + + L +L++L + +NQ+ A+ +L L N N++ L
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 66 GLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 123
LL + L ++ N + V R F+ +L ++ L NQI+ + + L L
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEV 185
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L L++N +T + + +LRT L N +
Sbjct: 186 LTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 107 (42.7 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 37/121 (30%), Positives = 56/121 (46%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L+A+P +I ++ L NN RI D GL +L+V + NQI V R F ++
Sbjct: 52 LQAIPKNIPRNTERLELNGNNITRIHKND--FAGLKQLRVLQLMENQIGAVERGAFDDMK 109
Query: 97 NLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L NQ+ + L L+ L LS N L RG L+ + L N+I
Sbjct: 110 ELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQI 169
Query: 156 N 156
+
Sbjct: 170 S 170
Score = 106 (42.4 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
T +L N N+ E + ++++ ++ L +N++ + DG G +S L L+ N
Sbjct: 542 TTELRLNN-NEISIL-EATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTAN 599
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L ++ F GLD L+ L + +N ++ + S T L + L + N +T + F
Sbjct: 600 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 659
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N QLA
Sbjct: 660 LQALSTLNLLANPFNC-NCQLA 680
Score = 92 (37.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N+I +L + + + L+ L LS+N L+ I P F GL SL++L + N ++TL+E
Sbjct: 791 LSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEG 850
Query: 238 SKTFLPALEELFVSHNSL 255
+ +L L + N L
Sbjct: 851 IFADVTSLSHLAIGANPL 868
Score = 91 (37.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
N+ EL L N+ + G L L +DLS+NK+ ++S F + L L +S+N L
Sbjct: 762 NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK 260
+ + L +L L + N ++ L +
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDVSTLQE 849
Score = 41 (19.5 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHG 333
+ LNS +Y+ G PV D A + +N T HG
Sbjct: 1274 YTLNSEAPLYVGGMPV---DVNSAAFRLWQILNG-TSFHG 1309
Score = 38 (18.4 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAIN 282
EL++ N T + L DL++N I +++
Sbjct: 765 ELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLS 800
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 157 (60.3 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 52/169 (30%), Positives = 82/169 (48%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T +D GLK+LR + L N+I G G + + L+L N+
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQI---GAVERGA--FDDMKELERLRLNRNQ 120
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L LSRLDLS N L+ + F G LK L + N ++ +EE + L
Sbjct: 121 LQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
LE L +++N++T + F+ +P L L H+N + LA +Q
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL-HSNHLFCDCHLAWLSQ 228
Score = 153 (58.9 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 52/156 (33%), Positives = 76/156 (48%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + + NQ+ E P Q L SL N+IT L G
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRG 375
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLY 125
+ GL LQ+ ++ N+I +R D FQ+L NL +SL +N+I S+ + + L + L+
Sbjct: 376 VFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLH 435
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
L+ N F+ D LK L L N I G R
Sbjct: 436 LAQNP---FICDC--NLKWLADF-LRTNPIETTGAR 465
Score = 151 (58.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 84/337 (24%), Positives = 148/337 (43%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L+ L L+ N L+++ + + L+ L +++NQ+ + + L L NNN IT
Sbjct: 135 LSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNIT 194
Query: 63 SLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS--LQNNQITSMNSSLSGLT 119
++ + KL+ F + N + F + H L +S L+ + + SG
Sbjct: 195 TIPVSSFNHMPKLRTFRLHSNHL-------FCDCH-LAWLSQWLRQRPTIGLFTQCSGPA 246
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG--KNQVQGVTNI--- 174
L L ++ Q +EF ++ LS + + G + +G+T I
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLTAIPAN 306
Query: 175 -----FELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
E++L+ N I+++ GA L R+DLS+N++ I+PD F GL SL L +
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLAL 287
N +T L L L+ L ++ N + + D F L L L N I++ LA
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS----LAK 422
Query: 288 KTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
T L + ++L NP +CD +++ + D + T
Sbjct: 423 GT---FTSLRAIQTLHLAQNPFICDCNLKWLADFLRT 456
Score = 139 (54.0 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANN 58
GL L L L N++ ++E G + +L+ L + +NQL+ LP + +Q L L +
Sbjct: 83 GLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSE 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N + ++ RG T L+ +D NQI+ + F+ L L+ ++L NN IT++ SS +
Sbjct: 143 NSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN 202
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 203 HMPKLRTFRLHSNHL 217
Score = 136 (52.9 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 37/127 (29%), Positives = 70/127 (55%)
Query: 124 LYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L++N+++ + + L L+ ++LS NK+++ +G +G T++ EL L N
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEI---EDGT--FEGATSVSELHLTAN 599
Query: 183 EIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
++E++ G G+ GL L L +N++ I D F GL ++++L + N +TT+ +
Sbjct: 600 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 659
Query: 242 LPALEEL 248
L AL L
Sbjct: 660 LQALSTL 666
Score = 131 (51.2 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 31 LVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMV 87
L + N++ L + + S L + +NN+++ + DG G T + ++ NQ+ V
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
R F+ L L ++ L+NN+I+ + N S +GL + L L N +T L+ L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 664
Query: 147 TVDLSYNKIN 156
T++L N N
Sbjct: 665 TLNLLANPFN 674
Score = 119 (46.9 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 36/127 (28%), Positives = 64/127 (50%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN + LE G LS L+ + + N++ + + + + L+ N++ S+
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 65 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
G+ RGL L+ + N+I+ + D F L N+ +SL +N IT+++ + L L+
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 664
Query: 123 YLYLSHN 129
L L N
Sbjct: 665 TLNLLAN 671
Score = 111 (44.1 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L LN N + + + L +L++L + +NQ+ A+ +L L N N++ L
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 66 GLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 123
LL + L ++ N + V R F+ +L ++ L NQI+ + + L L
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEV 185
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L L++N +T + + +LRT L N +
Sbjct: 186 LTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 107 (42.7 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 37/121 (30%), Positives = 56/121 (46%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L+A+P +I ++ L NN RI D GL +L+V + NQI V R F ++
Sbjct: 52 LQAIPKNIPRNTERLELNGNNITRIHKND--FAGLKQLRVLQLMENQIGAVERGAFDDMK 109
Query: 97 NLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L NQ+ + L L+ L LS N L RG L+ + L N+I
Sbjct: 110 ELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQI 169
Query: 156 N 156
+
Sbjct: 170 S 170
Score = 106 (42.4 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
T +L N N+ E + ++++ ++ L +N++ + DG G +S L L+ N
Sbjct: 542 TTELRLNN-NEISIL-EATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTAN 599
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L ++ F GLD L+ L + +N ++ + S T L + L + N +T + F
Sbjct: 600 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 659
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N QLA
Sbjct: 660 LQALSTLNLLANPFNC-NCQLA 680
Score = 92 (37.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N+I +L + + + L+ L LS+N L+ I P F GL SL++L + N ++TL+E
Sbjct: 791 LSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEG 850
Query: 238 SKTFLPALEELFVSHNSL 255
+ +L L + N L
Sbjct: 851 IFADVTSLSHLAIGANPL 868
Score = 91 (37.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
N+ EL L N+ + G L L +DLS+NK+ ++S F + L L +S+N L
Sbjct: 762 NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK 260
+ + L +L L + N ++ L +
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDVSTLQE 849
Score = 41 (19.5 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHG 333
+ LNS +Y+ G PV D A + +N T HG
Sbjct: 1274 YTLNSEAPLYVGGMPV---DVNSAAFRLWQILNG-TSFHG 1309
Score = 38 (18.4 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAIN 282
EL++ N T + L DL++N I +++
Sbjct: 765 ELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLS 800
>ZFIN|ZDB-GENE-050522-43 [details] [associations]
symbol:vasna "vasorin a" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR003961 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 SMART:SM00181 ZFIN:ZDB-GENE-050522-43
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG084318 EMBL:AY838878 IPI:IPI01006442 UniGene:Dr.83310
ProteinModelPortal:Q3MKM9 IntAct:Q3MKM9 InParanoid:Q3MKM9
Uniprot:Q3MKM9
Length = 688
Score = 212 (79.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 74/252 (29%), Positives = 123/252 (48%)
Query: 8 LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---ANNNRIT- 62
L++ N++ L+ Q L +L++L + QN L +P + FS L SL+ ++N IT
Sbjct: 57 LYVFQNKINILQQQDFVELGELEMLDLSQNSLSEIPDGV--FSPLSSLHNLDLSSNYITH 114
Query: 63 -SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
S D + GL L+ + N I + F+ L NL + LQ NQI S+ +L L +L
Sbjct: 115 ISKDSFI-GLVNLERLYLYSNIIQNIHPAAFEGLENLLELKLQGNQI-SVLPALQ-LPRL 171
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
+L LS+N + + D L+T L KI G + + + + N+ L +
Sbjct: 172 LHLDLSYNSIPPLVAQD------LQTPHLESLKIAGLGLTSLDEELLGSLVNLHVLDVSQ 225
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N++ ++ L + GL L+L+ N L ++ +DF L +L LD+S+ L E
Sbjct: 226 NQLVDIQPTLKSMGGLRNLNLTGNPLGSLKHEDFQNLVNLLELDLSNLNLQGFPEGFFNL 285
Query: 242 LPALEELFVSHN 253
P LE+L + N
Sbjct: 286 FPKLEKLTAAEN 297
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 76/264 (28%), Positives = 115/264 (43%)
Query: 22 LGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 80
L LS L LL + L + P D N I GL +L VF
Sbjct: 4 LSPLSHLILLQLLCGCLSSRCPHDCTCLPSNNIFCVQRNLIYMPRGLPSTGKQLYVFQ-- 61
Query: 81 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDI 139
N+I ++++ +F L L+ + L N ++ + + S L+ L L LS N +T D
Sbjct: 62 -NKINILQQQDFVELGELEMLDLSQNSLSEIPDGVFSPLSSLHNLDLSSNYITHISKDSF 120
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSR 199
GL L + L Y+ I +N +G+ N+ ELKLQ N+I L AL + L
Sbjct: 121 IGLVNLERLYL-YSNI----IQNIHPAAFEGLENLLELKLQGNQISVLP-ALQ-LPRLLH 173
Query: 200 LDLSHNKLRTISPDDFIG--LDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTR 257
LDLS+N + + D L+SLK+ + LT+L+E L L L VS N L
Sbjct: 174 LDLSYNSIPPLVAQDLQTPHLESLKIAGLG---LTSLDEELLGSLVNLHVLDVSQNQLVD 230
Query: 258 LDKDFHGLPVLCKADLAHNNIKAI 281
+ + L +L N + ++
Sbjct: 231 IQPTLKSMGGLRNLNLTGNPLGSL 254
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 47/159 (29%), Positives = 74/159 (46%)
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N + + DG + L LDLS N + IS D FIGL +L+ L + N++ +
Sbjct: 81 LDLSQNSLSEIPDGVFSPLSSLHNLDLSSNYITHISKDSFIGLVNLERLYLYSNIIQNIH 140
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI---NIQLALKTQCQ 292
+ L L EL + N ++ L LP L DL++N+I + ++Q +
Sbjct: 141 PAAFEGLENLLELKLQGNQISVLPA--LQLPRLLHLDLSYNSIPPLVAQDLQTPHLESLK 198
Query: 293 IFGLNST-LRIYLEGNPV---LCDDSMRAVIDAMETINN 327
I GL T L L G+ V + D S ++D T+ +
Sbjct: 199 IAGLGLTSLDEELLGSLVNLHVLDVSQNQLVDIQPTLKS 237
>MGI|MGI:1350918 [details] [associations]
symbol:Omd "osteomodulin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1350918 GO:GO:0005578 eggNOG:COG4886
GO:GO:0007155 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4958 KO:K08124 OrthoDB:EOG415GDJ OMA:FYIPRNL
EMBL:AB007848 IPI:IPI00127402 RefSeq:NP_036180.1 UniGene:Mm.390589
ProteinModelPortal:O35103 SMR:O35103 STRING:O35103 PRIDE:O35103
Ensembl:ENSMUST00000065494 GeneID:27047 KEGG:mmu:27047
UCSC:uc007qjp.1 InParanoid:O35103 NextBio:304973 Bgee:O35103
CleanEx:MM_OMD Genevestigator:O35103 GermOnline:ENSMUSG00000048368
Uniprot:O35103
Length = 423
Score = 208 (78.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 67/234 (28%), Positives = 117/234 (50%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
S+Y +N ++ ++ + + +L N+ FN I V + F N +L I+L +N+I S
Sbjct: 75 SMYCDNRKLKTIPIIPMHIQQL---NLQFNDIEAVTANSFINATHLKEINLSHNKIKSQK 131
Query: 113 SS---LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
+ L+ L L+L HN L EF + L+RL L YN+I+ T N +
Sbjct: 132 IDYGVFAKLSNLQQLHLEHNNLEEFPFPLPKSLERLL---LGYNEISILPT-----NAMD 183
Query: 170 GVTNIFELKLQHNEIENL---DGALMGIHGLSRLDLSHNKLRTISPDDFIGL-DSLKMLD 225
G+ N+ L L +N + + + L + L +L+L +N+L ++ P +GL SL L
Sbjct: 184 GLVNVTMLDLCYNHLSDSMLKEKTLSKMEKLMQLNLCNNRLESM-P---LGLPSSLMYLS 239
Query: 226 ISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIK 279
+ +N ++++ + LP L L +SHN L + D L L + ++ HN +K
Sbjct: 240 LENNSISSIPDNYFDKLPKLHALRISHNKLEDIPYDIFNLSNLIELNVGHNKLK 293
Score = 153 (58.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 55/215 (25%), Positives = 101/215 (46%)
Query: 3 TDLNWLFLNNNRLKSLE---GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L + L++N++KS + G LS LQ L +E N LE P L L L N
Sbjct: 115 THLKEINLSHNKIKSQKIDYGVFAKLSNLQQLHLEHNNLEEFP--FPLPKSLERLLLGYN 172
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQIT--MVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
I+ L + GL + + ++ +N ++ M++ + L ++L NN++ SM L
Sbjct: 173 EISILPTNAMDGLVNVTMLDLCYNHLSDSMLKEKTLSKMEKLMQLNLCNNRLESMPLGLP 232
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+ L YL L +N ++ + L +L + +S+NK+ + ++N+ E
Sbjct: 233 --SSLMYLSLENNSISSIPDNYFDKLPKLHALRISHNKLEDI------PYDIFNLSNLIE 284
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
L + HN+++ A L L L +N++ +I+
Sbjct: 285 LNVGHNKLKQ---AFYIPRNLEHLYLQNNEIESIN 316
>UNIPROTKB|P51890 [details] [associations]
symbol:LUM "Lumican" species:9031 "Gallus gallus"
[GO:0007601 "visual perception" evidence=IEA] [GO:0030199 "collagen
fibril organization" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027219 PROSITE:PS51450 GO:GO:0005615 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0005583
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:M80584 IPI:IPI00592361 PIR:A41748
RefSeq:XP_416135.1 UniGene:Gga.4078 ProteinModelPortal:P51890
PRIDE:P51890 Ensembl:ENSGALT00000018392 GeneID:417891
KEGG:gga:417891 InParanoid:P51890 NextBio:20821127 Uniprot:P51890
Length = 343
Score = 205 (77.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 81/268 (30%), Positives = 129/268 (48%)
Query: 5 LNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNR 60
+ +L+L NN ++++E ++ LQ L+++ N LE ++FS+L +L + N N
Sbjct: 71 IKYLYLRNNMIEAIEENTFDNVTDLQWLILDHNHLENSKIKGRVFSKLKNLKKLHINYNN 130
Query: 61 ITSLDGLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT--SMNSSLSG 117
+T G L + L LQ + N+IT V + L NL I LQNNQ+ S++ + G
Sbjct: 131 LTEAVGPLPKTLDDLQ---LSHNKITKVNPGALEGLVNLTVIHLQNNQLKTDSISGAFKG 187
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L L YL LS NQLT+ GL ++ + Y N+ N QG + L
Sbjct: 188 LNSLLYLDLSFNQLTKLPT----GLPH--SLLMLYFDNNQIS--NIPDEYFQGFKTLQYL 239
Query: 178 KLQHNEIEN--LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+L HN++ + + G + I L LDLS N+L++I P L++ L ++ L
Sbjct: 240 RLSHNKLTDSGIPGNVFNITSLVELDLSFNQLKSI-PTVSENLENF-YLQVNKINKFPLS 297
Query: 236 ETSKTFLPA----LEELFVSHNSLTRLD 259
K P + L + N+LTR D
Sbjct: 298 SFCKVVGPLTYSKITHLRLDGNNLTRAD 325
Score = 192 (72.6 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 70/242 (28%), Positives = 124/242 (51%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQL-GTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYAN 57
+TDL WL L++N L++ ++G++ L L+ L I N L EA+ L L L +
Sbjct: 92 VTDLQWLILDHNHLENSKIKGRVFSKLKNLKKLHINYNNLTEAVGP---LPKTLDDLQLS 148
Query: 58 NNRITSLD-GLLRGLTKLQVFNMDFNQI-TMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
+N+IT ++ G L GL L V ++ NQ+ T F+ L++L + L NQ+T + + L
Sbjct: 149 HNKITKVNPGALEGLVNLTVIHLQNNQLKTDSISGAFKGLNSLLYLDLSFNQLTKLPTGL 208
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L LY +NQ++ + +G K L+ + LS+NK+ G V +T++
Sbjct: 209 PH--SLLMLYFDNNQISNIPDEYFQGFKTLQYLRLSHNKLTDSGI----PGNVFNITSLV 262
Query: 176 ELKLQHNEI-------ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
EL L N++ ENL+ + ++ +++ LS + + + P + + L+ LD +
Sbjct: 263 ELDLSFNQLKSIPTVSENLENFYLQVNKINKFPLS-SFCKVVGPLTYSKITHLR-LD-GN 319
Query: 229 NL 230
NL
Sbjct: 320 NL 321
Score = 190 (71.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 68/239 (28%), Positives = 123/239 (51%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
++Y +N ++ ++ + G+ L + N N I + + F N+ +L + L +N + N
Sbjct: 53 AMYCDNLKLKTIPIVPSGIKYLYLRN---NMIEAIEENTFDNVTDLQWLILDHNHLE--N 107
Query: 113 SSLSG-----LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQ 167
S + G L L L++++N LTE + + K L + LS+NKI K N G
Sbjct: 108 SKIKGRVFSKLKNLKKLHINYNNLTE-AVGPLP--KTLDDLQLSHNKITKV---NPGA-- 159
Query: 168 VQGVTNIFELKLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD-SLKML 224
++G+ N+ + LQ+N++ +++ GA G++ L LDLS N+L + P GL SL ML
Sbjct: 160 LEGLVNLTVIHLQNNQLKTDSISGAFKGLNSLLYLDLSFNQLTKL-PT---GLPHSLLML 215
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTR--LDKDFHGLPVLCKADLAHNNIKAI 281
+N ++ + + L+ L +SHN LT + + + L + DL+ N +K+I
Sbjct: 216 YFDNNQISNIPDEYFQGFKTLQYLRLSHNKLTDSGIPGNVFNITSLVELDLSFNQLKSI 274
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/172 (29%), Positives = 83/172 (48%)
Query: 1 GLTDLNWLFLNNNRLK--SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 58
GL +L + L NN+LK S+ G L+ L L + NQL LP+ + L LY +N
Sbjct: 162 GLVNLTVIHLQNNQLKTDSISGAFKGLNSLLYLDLSFNQLTKLPTGLP--HSLLMLYFDN 219
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N+I+++ D +G LQ + N++T + + F N+ +L + L NQ+ S+ +
Sbjct: 220 NQISNIPDEYFQGFKTLQYLRLSHNKLTDSGIPGNVF-NITSLVELDLSFNQLKSIPTVS 278
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD-LSYNKINKFGTRNEGKN 166
L YL N++ +F L + V L+Y+KI R +G N
Sbjct: 279 ENLENF---YLQVNKINKFPLSSF-----CKVVGPLTYSKITHL--RLDGNN 320
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 179 (68.1 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 89/323 (27%), Positives = 143/323 (44%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-G 66
L N +K + G +L+ + + NQ+ L SD Q L SL N+IT L G
Sbjct: 298 LEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKG 357
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTKLAYLY 125
L GL LQ+ ++ N+I +R D FQ+L NL+ +SL +N++ T + S L + L+
Sbjct: 358 LFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLH 417
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG--VTNIFELKLQHNE 183
L+ N F+ D LK L L N I G R ++ + I K + +
Sbjct: 418 LAQNP---FMCDC--HLKWLADY-LQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCSG 471
Query: 184 IENLDGALMG--IHGLS----------RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+E+ L G L+ +D S KL I PD + L +++N
Sbjct: 472 VEDYRSKLGGDCFADLACPEKCRCEGTTVDCSGQKLTKI-PDHIPQYTA--ELRLNNNEF 528
Query: 232 TTLEETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALK 288
T LE T F LP L ++ +S+N +T +++ F G + + L N ++ ++ + LK
Sbjct: 529 TVLEATG-IFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSM-LK 586
Query: 289 TQCQIFGLNSTLRIYLEGNPVLC 311
GL + L N + C
Sbjct: 587 ------GLGGLRTLMLRSNRISC 603
Score = 163 (62.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/157 (31%), Positives = 80/157 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N LT+ D GLK LR + L NKI+ + Q + + L+L N
Sbjct: 53 LDLNANNLTKITKADFAGLKNLRVLQLMENKISSIE-----RGAFQDLQELERLRLNRNN 107
Query: 184 IENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L +G L RLDLS N+++ I F G +K L + +N ++ +E+ + L
Sbjct: 108 LQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRAL 167
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNI 278
LE L +++N+++RL F+ +P L L NN+
Sbjct: 168 GDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNL 204
Score = 144 (55.7 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 41/135 (30%), Positives = 74/135 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
GL +L L L N++ S+E G L +L+ L + +N L+ LP + L ++L L +
Sbjct: 70 GLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSE 129
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N+I + RG T+++ +D+NQI+ + F+ L +L+ ++L NN I+ ++ +S +
Sbjct: 130 NQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLSVASFN 189
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 190 HMPKLRTFRLHSNNL 204
Score = 137 (53.3 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 47/155 (30%), Positives = 72/155 (46%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L ++P +I + L ANN +IT D GL L+V + N+I+ + R FQ+L
Sbjct: 39 LRSVPRNIPRNVERLDLNANNLTKITKAD--FAGLKNLRVLQLMENKISSIERGAFQDLQ 96
Query: 97 NLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N + + L G TKL L LS NQ+ RG ++ + L YN+I
Sbjct: 97 ELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQI 156
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA 190
+ +G + G + L L +N I L A
Sbjct: 157 SCI---EDGAFRALGDLEV--LTLNNNNISRLSVA 186
Score = 132 (51.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 44/136 (32%), Positives = 72/136 (52%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
+ RLDL+ N L I+ DF GL +L++L + N ++++E + L LE L ++ N+L
Sbjct: 50 VERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQ 109
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DD 313
L + F G L + DL+ N I+ I + A + +I L L+ N + C D
Sbjct: 110 VLPELLFLGTTKLFRLDLSENQIQGIP-RKAFRGSTEIKNLQ------LDYNQISCIEDG 162
Query: 314 SMRAVIDA-METINNN 328
+ RA+ D + T+NNN
Sbjct: 163 AFRALGDLEVLTLNNN 178
Score = 130 (50.8 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 41/151 (27%), Positives = 76/151 (50%)
Query: 100 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKF 158
++ ++T + + T A L L++N+ T I + L +LR ++LS NKI
Sbjct: 499 TVDCSGQKLTKIPDHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDI 556
Query: 159 GTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIG 217
EG +G + + EL L N +E + +++ G+ GL L L N++ ++ F G
Sbjct: 557 ---EEGT--FEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTG 611
Query: 218 LDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
L S+++L + NL+T++ + L +L L
Sbjct: 612 LSSVRLLSLYDNLITSMSPGAFDTLHSLSTL 642
Score = 124 (48.7 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 51/182 (28%), Positives = 84/182 (46%)
Query: 164 GKNQVQGVTN----IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
GK + TN I E++L+ N I+ + GA L R+DLS+N++ ++ D F GL
Sbjct: 279 GKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGL 338
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
SL L + N +T L + L +L+ L ++ N + L D F L L L N
Sbjct: 339 RSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNK 398
Query: 278 IKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETIC 337
++ I A T L + ++L NP +CD ++ + D ++ +N + G
Sbjct: 399 LQTI----AKGT---FSSLRAIQTLHLAQNPFMCDCHLKWLADYLQ--DNPIETSGARCT 449
Query: 338 QP 339
P
Sbjct: 450 SP 451
Score = 123 (48.4 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 8 LFLN-NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L LN NN K + L L++L + +N++ ++ Q +L L N N + L
Sbjct: 53 LDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLP 112
Query: 66 GLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAY 123
LL G TKL ++ NQI + R F+ + ++ L NQI+ + + + L L
Sbjct: 113 ELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEV 172
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L L++N ++ + + +LRT L N +
Sbjct: 173 LTLNNNNISRLSVASFNHMPKLRTFRLHSNNL 204
Score = 112 (44.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 124
G+ R +T+L + +F Q+ + E N +L I L NNQI+++ N S S +++L L
Sbjct: 734 GIPRDVTELYLDGNEFTQVPL----ELSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTL 789
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
LS+N+L GLK LR + L N I
Sbjct: 790 ILSYNRLRCIPAKAFDGLKSLRLLSLHGNDI 820
Score = 99 (39.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN LE G L +L+ + + N++ + + S + L +NR+ +
Sbjct: 521 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGV 580
Query: 65 D-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
+L+GL L+ + N+I+ V F L ++ +SL +N ITSM+ + L L+
Sbjct: 581 HYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLS 640
Query: 123 YLYLSHN 129
L L N
Sbjct: 641 TLNLLAN 647
Score = 97 (39.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 29/109 (26%), Positives = 54/109 (49%)
Query: 50 QLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 108
QL + +NN+IT ++ G G + + + N++ V + L L ++ L++N+I
Sbjct: 542 QLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRI 601
Query: 109 TSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
+ +N+ S +GL+ + L L N +T L L T++L N N
Sbjct: 602 SCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFN 650
Score = 87 (35.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 36/125 (28%), Positives = 58/125 (46%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N+ + P + L ++D+S+N ++TL S + + L L +S+N L
Sbjct: 739 VTELYLDGNEFTQV-PLELSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLR 797
Query: 257 RLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ K F GL L L H N A+ A K L+S + L NP+ CD M
Sbjct: 798 CIPAKAFDGLKSLRLLSL-HGNDIAVIPDGAFKD------LSSLSHLALGANPLYCDCHM 850
Query: 316 RAVID 320
+ + D
Sbjct: 851 QWLSD 855
Score = 85 (35.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 33/118 (27%), Positives = 54/118 (45%)
Query: 162 NEG-KNQVQGVT-NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
N+G K +G+ ++ EL L NE + L L+ +DLS+N++ T+S F +
Sbjct: 725 NKGLKVLPKGIPRDVTELYLDGNEFTQVPLELSNYKHLTLIDLSNNQISTLSNHSFSNMS 784
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHN 276
L L +S+N L + + L +L L + N + + D F L L L N
Sbjct: 785 ELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGAN 842
Score = 85 (35.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 36/142 (25%), Positives = 64/142 (45%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T +L N N+F T E + + + ++ L +N+I +++ G G G++ L L+ N
Sbjct: 518 TAELRLNN-NEF-TVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSN 575
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L + GL L+ L + N ++ + S T L ++ L + N +T + F
Sbjct: 576 RLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDT 635
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N LA
Sbjct: 636 LHSLSTLNLLANPFNC-NCHLA 656
Score = 82 (33.9 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N+I L + + L L LS+N+LR I F GL SL++L + N + +
Sbjct: 765 IDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIP 824
Query: 236 ETSKTFLPALEELFVSHNSL 255
+ + L +L L + N L
Sbjct: 825 DGAFKDLSSLSHLALGANPL 844
Score = 62 (26.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALP--SDIQLFS-QLGSLYA 56
G + +N L L +NRL+ + L L L+ L++ N++ + S L S +L SLY
Sbjct: 563 GASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLY- 621
Query: 57 NNNRITSLD-GLLRGLTKLQVFNM 79
+N ITS+ G L L N+
Sbjct: 622 -DNLITSMSPGAFDTLHSLSTLNL 644
>MGI|MGI:2676665 [details] [associations]
symbol:Lrrc7 "leucine rich repeat containing 7"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0010976 "positive regulation
of neuron projection development" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0015629 "actin
cytoskeleton" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030175 "filopodium"
evidence=ISO] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043194 "axon initial segment" evidence=ISO] [GO:0043197
"dendritic spine" evidence=ISO] [GO:0045202 "synapse" evidence=ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA] Pfam:PF00595
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 MGI:MGI:2676665 GO:GO:0005886
GO:GO:0005737 GO:GO:0014069 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 SUPFAM:SSF50156 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000060229 HOVERGEN:HBG052305 EMBL:AK122498
IPI:IPI00831714 UniGene:Mm.132162 ProteinModelPortal:Q80TE7
SMR:Q80TE7 IntAct:Q80TE7 STRING:Q80TE7 PhosphoSite:Q80TE7
PaxDb:Q80TE7 PRIDE:Q80TE7 UCSC:uc008rvw.1 CleanEx:MM_LRRC7
Genevestigator:Q80TE7 GermOnline:ENSMUSG00000028176 Uniprot:Q80TE7
Length = 1490
Score = 215 (80.7 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 78/277 (28%), Positives = 131/277 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L+ L I N L +LP+ I L L + N +
Sbjct: 48 LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L + N I+ + D F L NL + L + + + ++ L KL L
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLP-DGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N L + L + L +L +DL N N+F E +Q+Q N+ EL + +N +
Sbjct: 167 ELRENHL-KTLPKSMHKLAQLERLDLG-N--NEFSELPEVLDQIQ---NLRELWMDNNAL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ L G++ + L LD+S N++ T+ D G ++L+ L +S N+L L + S L
Sbjct: 220 QVLPGSIGKLKMLVYLDMSKNRIETVDMD-ISGCEALEDLLLSSNMLQQLPD-SIGLLKK 277
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L L V N LT L L +L + D + N ++++
Sbjct: 278 LTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESL 314
Score = 214 (80.4 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 78/281 (27%), Positives = 128/281 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+LN+ L+ L G L KL++L + +N L+ LP + +QL L NN
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ L +L + L+ MD N + V L L + + N+I +++ +SG L
Sbjct: 197 SELPEVLDQIQNLRELWMDNNAL-QVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEAL 255
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L + L D I LK+L T+ + N++ N + ++ + E
Sbjct: 256 EDLLLSSNMLQQ-LPDSIGLLKKLTTLKVDDNQLTML------PNTIGNLSLLEEFDCSC 308
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-EETSKT 240
NE+E+L + +H L L + N L + P + ++ ++ + N L L EE +
Sbjct: 309 NELESLPPTIGYLHSLRTLAVDENFLPEL-PREIGSCKNVTVMSLRSNKLEFLPEEIGQ- 366
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ L L +S N L L F L L L+ N KA+
Sbjct: 367 -MQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 59/211 (27%), Positives = 100/211 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+ +L L+++NN L+ L G +G L L L + +N++E + DI L L ++N +
Sbjct: 206 IQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNML 265
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + L KL +D NQ+TM+ + NL L+ N++ S+ ++ L L
Sbjct: 266 QQLPDSIGLLKKLTTLKVDDNQLTMLP-NTIGNLSLLEEFDCSCNELESLPPTIGYLHSL 324
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L + N L E L +I K + + L NK+ +F G+ Q V N L
Sbjct: 325 RTLAVDENFLPE-LPREIGSCKNVTVMSLRSNKL-EFLPEEIGQMQRLRVLN-----LSD 377
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISP 212
N ++NL + + L+ L LS N+ + + P
Sbjct: 378 NRLKNLPFSFTKLKELAALWLSDNQSKALIP 408
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 65/296 (21%), Positives = 124/296 (41%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L L KL++ + N + + + L L+ + L NN+ + + L + L
Sbjct: 151 EFLPANFGRLVKLRILELRENHLKTLPKS-MHKLAQLERLDLGNNEFSELPEVLDQIQNL 209
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L++ +N L + L I LK L +D+S N+I + G + +L L
Sbjct: 210 RELWMDNNAL-QVLPGSIGKLKMLVYLDMSKNRIETVDM------DISGCEALEDLLLSS 262
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++ L ++ + L+ L + N+L T+ P+ L L+ D S N L +L T +
Sbjct: 263 NMLQQLPDSIGLLKKLTTLKVDDNQL-TMLPNTIGNLSLLEEFDCSCNELESLPPTIG-Y 320
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L +L L V N L L ++ + L N ++ + ++ + ++ L+
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLS 376
Score = 139 (54.0 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 45/154 (29%), Positives = 74/154 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G L L L++N L+ L +G L KL L ++ NQL LP+ I S L + N
Sbjct: 251 GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNE 310
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ SL + L L+ +D N + + R E + N+ +SL++N++ + + + +
Sbjct: 311 LESLPPTIGYLHSLRTLAVDENFLPELPR-EIGSCKNVTVMSLRSNKLEFLPEEIGQMQR 369
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L L LS N+L + LK L + LS N+
Sbjct: 370 LRVLNLSDNRLKNLPFSFTK-LKELAALWLSDNQ 402
>RGD|708527 [details] [associations]
symbol:Lrrc7 "leucine rich repeat containing 7" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006950 "response
to stress" evidence=IEP] [GO:0008022 "protein C-terminus binding"
evidence=IDA] [GO:0010976 "positive regulation of neuron projection
development" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0030054 "cell junction" evidence=IEA] [GO:0030175
"filopodium" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043194 "axon initial segment" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] Pfam:PF00595
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 RGD:708527 GO:GO:0005886
GO:GO:0005737 GO:GO:0014069 GO:GO:0010976 GO:GO:0006950
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 GO:GO:0030175
GO:GO:0014070 GO:GO:0008022 SUPFAM:SSF50156 InterPro:IPR025875
Pfam:PF12799 GO:GO:0043194 HOGENOM:HOG000060229 HOVERGEN:HBG052305
CTD:57554 EMBL:U66707 EMBL:AF266164 IPI:IPI00189777 IPI:IPI00454351
IPI:IPI00454352 IPI:IPI00454353 IPI:IPI00454354 PIR:T31434
RefSeq:NP_476483.1 UniGene:Rn.89629 MINT:MINT-1785354 STRING:P70587
PhosphoSite:P70587 PRIDE:P70587 GeneID:117284 KEGG:rno:117284
NextBio:620243 ArrayExpress:P70587 Genevestigator:P70587
GermOnline:ENSRNOG00000011980 Uniprot:P70587
Length = 1490
Score = 215 (80.7 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 78/277 (28%), Positives = 131/277 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L+ L I N L +LP+ I L L + N +
Sbjct: 48 LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L + N I+ + D F L NL + L + + + ++ L KL L
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLP-DGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N L + L + L +L +DL N N+F E +Q+Q N+ EL + +N +
Sbjct: 167 ELRENHL-KTLPKSMHKLAQLERLDLG-N--NEFSELPEVLDQIQ---NLRELWMDNNAL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ L G++ + L LD+S N++ T+ D G ++L+ L +S N+L L + S L
Sbjct: 220 QVLPGSIGKLKMLVYLDMSKNRIETVDMD-ISGCEALEDLLLSSNMLQQLPD-SIGLLKK 277
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L L V N LT L L +L + D + N ++++
Sbjct: 278 LTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESL 314
Score = 214 (80.4 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 78/281 (27%), Positives = 128/281 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+LN+ L+ L G L KL++L + +N L+ LP + +QL L NN
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ L +L + L+ MD N + V L L + + N+I +++ +SG L
Sbjct: 197 SELPEVLDQIQNLRELWMDNNAL-QVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEAL 255
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L + L D I LK+L T+ + N++ N + ++ + E
Sbjct: 256 EDLLLSSNMLQQ-LPDSIGLLKKLTTLKVDDNQLTML------PNTIGNLSLLEEFDCSC 308
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-EETSKT 240
NE+E+L + +H L L + N L + P + ++ ++ + N L L EE +
Sbjct: 309 NELESLPPTIGYLHSLRTLAVDENFLPEL-PREIGSCKNVTVMSLRSNKLEFLPEEIGQ- 366
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ L L +S N L L F L L L+ N KA+
Sbjct: 367 -MQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 406
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 59/211 (27%), Positives = 100/211 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+ +L L+++NN L+ L G +G L L L + +N++E + DI L L ++N +
Sbjct: 206 IQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNML 265
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + L KL +D NQ+TM+ + NL L+ N++ S+ ++ L L
Sbjct: 266 QQLPDSIGLLKKLTTLKVDDNQLTMLP-NTIGNLSLLEEFDCSCNELESLPPTIGYLHSL 324
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L + N L E L +I K + + L NK+ +F G+ Q V N L
Sbjct: 325 RTLAVDENFLPE-LPREIGSCKNVTVMSLRSNKL-EFLPEEIGQMQRLRVLN-----LSD 377
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISP 212
N ++NL + + L+ L LS N+ + + P
Sbjct: 378 NRLKNLPFSFTKLKELAALWLSDNQSKALIP 408
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 65/296 (21%), Positives = 124/296 (41%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L L KL++ + N + + + L L+ + L NN+ + + L + L
Sbjct: 151 EFLPANFGRLVKLRILELRENHLKTLPKS-MHKLAQLERLDLGNNEFSELPEVLDQIQNL 209
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L++ +N L + L I LK L +D+S N+I + G + +L L
Sbjct: 210 RELWMDNNAL-QVLPGSIGKLKMLVYLDMSKNRIETVDM------DISGCEALEDLLLSS 262
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++ L ++ + L+ L + N+L T+ P+ L L+ D S N L +L T +
Sbjct: 263 NMLQQLPDSIGLLKKLTTLKVDDNQL-TMLPNTIGNLSLLEEFDCSCNELESLPPTIG-Y 320
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L +L L V N L L ++ + L N ++ + ++ + ++ L+
Sbjct: 321 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLS 376
Score = 139 (54.0 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 45/154 (29%), Positives = 74/154 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G L L L++N L+ L +G L KL L ++ NQL LP+ I S L + N
Sbjct: 251 GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNE 310
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ SL + L L+ +D N + + R E + N+ +SL++N++ + + + +
Sbjct: 311 LESLPPTIGYLHSLRTLAVDENFLPELPR-EIGSCKNVTVMSLRSNKLEFLPEEIGQMQR 369
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L L LS N+L + LK L + LS N+
Sbjct: 370 LRVLNLSDNRLKNLPFSFTK-LKELAALWLSDNQ 402
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 160 (61.4 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 49/157 (31%), Positives = 79/157 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T D GL+ LR + L NKI+ T G Q + + L+L N
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKIS---TIERGA--FQDLKELERLRLNRNH 114
Query: 184 IENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L +G L RLDLS N+++ I F G +K L + +N ++ +E+ + L
Sbjct: 115 LQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRAL 174
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNI 278
LE L +++N++TRL F+ +P L L NN+
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 151 (58.2 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 41/124 (33%), Positives = 64/124 (51%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N +K + G KL+ + + NQ+ L P Q L SL N+IT L
Sbjct: 307 LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS 366
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTKLAYLY 125
L GL LQ+ ++ N+I +R D FQ+LHNL+ +SL +N++ T + S L + ++
Sbjct: 367 LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMH 426
Query: 126 LSHN 129
L+ N
Sbjct: 427 LAQN 430
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 81/298 (27%), Positives = 130/298 (43%)
Query: 39 EALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 97
E P Q L SL N+IT L L GL LQ+ ++ N+I +R D FQ+LHN
Sbjct: 338 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 397
Query: 98 LDSISLQNNQI-TSMNSSLSGLTKLAYLYLSHNQLT-----EFLLD-------DIRGLK- 143
L+ +SL +N++ T + S L + ++L+ N ++L D + G +
Sbjct: 398 LNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARC 457
Query: 144 ----RLRTVDLSYNKINKFGTRNEGKNQ--VQGVTNIFELKLQHNEIENLD-GALMGIHG 196
RL + K KF R K Q + G T + KL + +L G
Sbjct: 458 TSPRRLANKRIGQIKSKKF--RCSAKEQYFIPG-TEDYRSKLSGDCFADLACPEKCRCEG 514
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF--LPALEELFVSHNS 254
+ +D S+ KL I P+ + L +++N T LE T F LP L ++ S+N
Sbjct: 515 TT-VDCSNQKLNKI-PEHIPQYTA--ELRLNNNEFTVLEATG-IFKKLPQLRKINFSNNK 569
Query: 255 LTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC 311
+T +++ F G + + L N ++ N+Q + GL S + L N + C
Sbjct: 570 ITDIEEGAFEGASGVNEILLTSNRLE--NVQHKM-----FKGLESLKTLMLRSNRITC 620
Score = 135 (52.6 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 39/135 (28%), Positives = 71/135 (52%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
GL L L L N++ ++E G L +L+ L + +N L+ P + L ++L L +
Sbjct: 77 GLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSE 136
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N+I ++ RG ++ +D+NQI+ + F+ L +L+ ++L NN IT ++ +S +
Sbjct: 137 NQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFN 196
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 197 HMPKLRTFRLHSNNL 211
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 100 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKF 158
++ N ++ + + T A L L++N+ T I + L +LR ++ S NKI
Sbjct: 516 TVDCSNQKLNKIPEHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 573
Query: 159 GTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIG 217
EG +G + + E+ L N +EN+ + G+ L L L N++ + D FIG
Sbjct: 574 ---EEGA--FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIG 628
Query: 218 LDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
L S+++L + N +TT+ + L +L L
Sbjct: 629 LSSVRLLSLYDNQITTVAPGAFDTLHSLSTL 659
Score = 133 (51.9 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 50/170 (29%), Positives = 86/170 (50%)
Query: 164 GKNQVQGVTN----IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
GK + TN I E++L+ N I+ + GA L R+DLS+N++ ++PD F GL
Sbjct: 288 GKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL 347
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT--RLD--KDFHGLPVLCKADLA 274
SL L + N +T L ++ L +L+ L ++ N + R+D +D H L +L D
Sbjct: 348 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-- 405
Query: 275 HNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
N ++ I A T + + + ++L NP +CD ++ + D + T
Sbjct: 406 -NKLQTI----AKGTFSPLRAIQT---MHLAQNPFICDCHLKWLADYLHT 447
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 44/134 (32%), Positives = 68/134 (50%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL+ N + I+ DF GL L++L + N ++T+E + L LE L ++ N L
Sbjct: 59 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLF 118
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F G L + DL+ N I+AI + A + I L L+ N + C D +
Sbjct: 119 PELLFLGTAKLYRLDLSENQIQAIP-RKAFRGAVDIKNLQ------LDYNQISCIEDGAF 171
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 172 RALRDLEVLTLNNN 185
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 40/161 (24%), Positives = 71/161 (44%)
Query: 97 NLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N + + L N IT + + +GL L L L N+++ + LK L + L+ N +
Sbjct: 56 NTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHL 115
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDD 214
F + G ++ L L N+I+ + A G + L L +N++ I
Sbjct: 116 QLFP-----ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA 170
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
F L L++L +++N +T L S +P L + N+L
Sbjct: 171 FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 125 (49.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 38/121 (31%), Positives = 58/121 (47%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L ++P +I ++ L NN RIT D GL L+V + N+I+ + R FQ+L
Sbjct: 46 LRSVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRVLQLMENKISTIERGAFQDLK 103
Query: 97 NLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N + L G KL L LS NQ+ RG ++ + L YN+I
Sbjct: 104 ELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQI 163
Query: 156 N 156
+
Sbjct: 164 S 164
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 42/139 (30%), Positives = 71/139 (51%)
Query: 94 NL-HNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
NL + I L+ N I + + S KL + LS+NQ++E D +GL+ L ++ L
Sbjct: 297 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 356
Query: 152 YNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTI 210
NKI + K+ +G+ ++ L L N+I L A +H L+ L L NKL+TI
Sbjct: 357 GNKITELP-----KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 411
Query: 211 SPDDFIGLDSLKMLDISHN 229
+ F L +++ + ++ N
Sbjct: 412 AKGTFSPLRAIQTMHLAQN 430
Score = 119 (46.9 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 35/92 (38%), Positives = 52/92 (56%)
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 124
G+ R +T+L +D NQ T+V + E N +L I L NN+I+++ N S S +T+L L
Sbjct: 751 GIPRDVTELY---LDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 806
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
LS+N+L GLK LR + L N I+
Sbjct: 807 ILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 838
Score = 117 (46.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 36/124 (29%), Positives = 60/124 (48%)
Query: 36 NQ-LEALPSDIQLFSQLGSLYANNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRRDEF 92
NQ L +P I ++ L NNN T L+ G+ + L +L+ N N+IT + F
Sbjct: 521 NQKLNKIPEHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF 578
Query: 93 QNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
+ ++ I L +N++ ++ + GL L L L N++T D GL +R + L
Sbjct: 579 EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLY 638
Query: 152 YNKI 155
N+I
Sbjct: 639 DNQI 642
Score = 98 (39.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN LE G L +L+ + N++ + + S + + +NR+ ++
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 597
Query: 65 DG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
+ +GL L+ + N+IT V D F L ++ +SL +NQIT++ + L L+
Sbjct: 598 QHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLS 657
Query: 123 YLYLSHN 129
L L N
Sbjct: 658 TLNLLAN 664
Score = 96 (38.9 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + + L L LS+N+LR I P F GL SL++L + N ++ +
Sbjct: 782 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP 841
Query: 236 ETSKTFLPALEELFVSHNSL 255
E + L AL L + N L
Sbjct: 842 EGAFNDLSALSHLAIGANPL 861
Score = 96 (38.9 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 30/111 (27%), Positives = 56/111 (50%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T +L N N+F T E + + + ++ +N+I +++ GA G G++ + L+ N
Sbjct: 535 TAELRLNN-NEF-TVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 592
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
+L + F GL+SLK L + N +T + S L ++ L + N +T
Sbjct: 593 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT 643
Score = 87 (35.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N+ T+ P + L ++D+S+N ++TL S + + L L +S+N L
Sbjct: 756 VTELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 814
Query: 257 RLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ + F GL L L N+I + + L++ + + NP+ CD +M
Sbjct: 815 CIPPRTFDGLKSLRLLSLHGNDISVV-------PEGAFNDLSALSHLAIGANPLYCDCNM 867
Query: 316 RAVID 320
+ + D
Sbjct: 868 QWLSD 872
Score = 81 (33.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 29/109 (26%), Positives = 46/109 (42%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
LYL NQ T + ++ K L +DLS N+I+ ++ +T + L L +N
Sbjct: 759 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQS-----FSNMTQLLTLILSYNR 812
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ + G+ L L L N + + F L +L L I N L
Sbjct: 813 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 861
Score = 81 (33.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 162 NEG-KNQVQGVT-NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
N+G K +G+ ++ EL L N+ + L L+ +DLS+N++ T+S F +
Sbjct: 742 NKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT 801
Query: 220 SLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
L L +S+N L + + L +L L + N ++ + + F+ L L + N
Sbjct: 802 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 859
Score = 70 (29.7 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 25/84 (29%), Positives = 48/84 (57%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD--IQLFS-QLGSLYA 56
G + +N + L +NRL++++ ++ L L+ L++ N++ + +D I L S +L SLY
Sbjct: 580 GASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLY- 638
Query: 57 NNNRITSL-DGLLRGLTKLQVFNM 79
+N+IT++ G L L N+
Sbjct: 639 -DNQITTVAPGAFDTLHSLSTLNL 661
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 154 (59.3 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 52/169 (30%), Positives = 82/169 (48%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T +D GLK+LR + L N+I G G + + L+L N+
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQI---GAVERGA--FDDMKELERLRLNRNQ 120
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L LSRLDLS N L+ + F G LK L + N ++ +EE + L
Sbjct: 121 LQVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRAL 180
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
LE L +++N++T + F+ +P L L H+N + LA +Q
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL-HSNHLFCDCHLAWLSQ 228
Score = 153 (58.9 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 52/156 (33%), Positives = 76/156 (48%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + + NQ+ E P Q L SL N+IT L G
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRG 375
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLY 125
+ GL LQ+ ++ N+I +R D FQ+L NL +SL +N+I S+ + + L + L+
Sbjct: 376 VFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLH 435
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
L+ N F+ D LK L L N I G R
Sbjct: 436 LAQNP---FICDC--NLKWLADF-LRTNPIETTGAR 465
Score = 135 (52.6 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 46/151 (30%), Positives = 75/151 (49%)
Query: 176 ELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
E++L+ N I+++ GA L R+DLS+N++ I+PD F GL SL L + N +T L
Sbjct: 313 EIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDL 372
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
L L+ L ++ N + + D F L L L N I++ LA T
Sbjct: 373 PRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS----LAKGT---F 425
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
L + ++L NP +CD +++ + D + T
Sbjct: 426 TSLRAIQTLHLAQNPFICDCNLKWLADFLRT 456
Score = 133 (51.9 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 41/135 (30%), Positives = 70/135 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANN 58
GL L L L N++ ++E G + +L+ L + +NQL+ LP + +Q L L +
Sbjct: 83 GLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSE 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N + ++ RG T L+ +D N+I+ + F+ L L+ ++L NN IT++ SS +
Sbjct: 143 NFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN 202
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 203 HMPKLRTFRLHSNHL 217
Score = 133 (51.9 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 46/176 (26%), Positives = 81/176 (46%)
Query: 62 TSLDGLLRGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLT 119
T L + + + + + ++ N IT + +++F L L + L NQI ++ + +
Sbjct: 50 TGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMK 109
Query: 120 KLAYLYLSHNQLT---EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+L L L+ NQL E L + + L RL DLS N + + +G T++
Sbjct: 110 ELERLRLNRNQLQVLPELLFQNNQALSRL---DLSENFLQAVP-----RKAFRGATDLKN 161
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
L+L N I ++ GA + GL L L++N + TI F + L+ + N L
Sbjct: 162 LQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 132 (51.5 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 36/127 (28%), Positives = 69/127 (54%)
Query: 124 LYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L++N+++ + + L L+ ++LS NK+++ +G +G ++ EL L N
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEI---EDGT--FEGAASVSELHLTAN 599
Query: 183 EIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
++E++ G G+ GL L L +N++ I D F GL ++++L + N +TT+ +
Sbjct: 600 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 659
Query: 242 LPALEEL 248
L AL L
Sbjct: 660 LQALSTL 666
Score = 125 (49.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 31 LVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMV 87
L + N++ L + + S L + +NN+++ + DG G + ++ NQ+ +
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESI 604
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
R F+ L L ++ L+NN+I+ + N S +GL + L L N +T L+ L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 664
Query: 147 TVDLSYNKIN 156
T++L N N
Sbjct: 665 TLNLLANPFN 674
Score = 120 (47.3 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 36/127 (28%), Positives = 64/127 (50%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN + LE G LS L+ + + N++ + + + + L+ N++ S+
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESI 604
Query: 65 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
G+ RGL L+ + N+I+ + D F L N+ +SL +N IT+++ + L L+
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 664
Query: 123 YLYLSHN 129
L L N
Sbjct: 665 TLNLLAN 671
Score = 116 (45.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 32 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRR 89
V+E + L+ ++ L NNN I+ L+ GL + L+ L+ N+ N+++ +
Sbjct: 523 VVECSSLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIED 582
Query: 90 DEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 148
F+ ++ + L NQ+ S+ S + GL L L L +N+++ D GL+ +R +
Sbjct: 583 GTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLL 642
Query: 149 DLSYNKI 155
L N I
Sbjct: 643 SLYDNHI 649
Score = 104 (41.7 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 37/152 (24%), Positives = 69/152 (45%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L LN N + + + L +L++L + +NQ+ A+ +L L N N++ L
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 66 GLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 123
LL + L ++ N + V R F+ +L ++ L N+I+ + + L L
Sbjct: 126 ELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEV 185
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L L++N +T + + +LRT L N +
Sbjct: 186 LTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 100 (40.3 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 34/132 (25%), Positives = 62/132 (46%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
T +L N N+ E + ++++ ++ L +N++ + DG G +S L L+ N
Sbjct: 542 TTELRLNN-NEISIL-EATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTAN 599
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L +I F GLD L+ L + +N ++ + S T L + L + N +T + F
Sbjct: 600 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 659
Query: 265 LPVLCKADLAHN 276
L L +L N
Sbjct: 660 LQALSTLNLLAN 671
Score = 92 (37.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N+I +L + + + L+ L LS+N L+ I P F GL SL++L + N ++TL+E
Sbjct: 791 LSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEG 850
Query: 238 SKTFLPALEELFVSHNSL 255
+ +L L + N L
Sbjct: 851 IFADVTSLSHLAIGANPL 868
Score = 91 (37.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
N+ EL L N+ + G L L +DLS+NK+ ++S F + L L +S+N L
Sbjct: 762 NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK 260
+ + L +L L + N ++ L +
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDVSTLQE 849
Score = 41 (19.5 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHG 333
+ LNS +Y+ G PV D A + +N T HG
Sbjct: 1274 YTLNSEAPLYVGGMPV---DVNSAAFRLWQILNG-TSFHG 1309
Score = 38 (18.4 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAIN 282
EL++ N T + L DL++N I +++
Sbjct: 765 ELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLS 800
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 208 (78.3 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 70/251 (27%), Positives = 124/251 (49%)
Query: 31 LVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVR 88
L + N + L D FSQL L+ ++N+I+++ + +GL KL+ + N+I +
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 89 RDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL ++ L NQ++S++ L GL KL L+L N L + + L
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNK 206
+DLS N++ R+ +N G+ + EL L+HN++ ++ A + + L L L NK
Sbjct: 186 LDLSTNRL-----RSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 240
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGL 265
+ ++ +L+ LD++ N + ++ T +P L+ L + +N L LD K + L
Sbjct: 241 ISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSL 300
Query: 266 PVLCKADLAHN 276
L L+ N
Sbjct: 301 RSLTTVGLSGN 311
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 69/234 (29%), Positives = 117/234 (50%)
Query: 3 TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYANNN 59
+ L WL L++N++ ++ E L KL+ L++ N++ LP+ QL + L +L + N
Sbjct: 85 SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLIN-LQNLDLSFN 143
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+++SL L GL KLQ ++ N + + F + +L+ + L N++ S+ + +G
Sbjct: 144 QLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAG 203
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L+L HNQLT+ L L T+ L +NKI+ G G +L
Sbjct: 204 LIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTC---GMEWTWGTLE--KL 258
Query: 178 KLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L NEI+ +D + + L L + +NKL ++ L SL + +S NL
Sbjct: 259 DLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLSGNL 312
Score = 202 (76.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 68/251 (27%), Positives = 124/251 (49%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L L +N + LE Q + S+L L ++ NQ+ + D Q +L L ++N+I L
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 66 GL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAY 123
L LQ ++ FNQ++ + + F L L ++ L++N + ++ L L +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L LS N+L + GL +LR + L +N++ K + + ++++ L LQ N+
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR-----LSSLHTLFLQWNK 240
Query: 184 IENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I NL + G L +LDL+ N+++ I F + +LK+L + +N L +L+ L
Sbjct: 241 ISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSL 300
Query: 243 PALEELFVSHN 253
+L + +S N
Sbjct: 301 RSLTTVGLSGN 311
Score = 201 (75.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 62/205 (30%), Positives = 98/205 (47%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 140
N IT + RD+F + L + L +NQI+++ + GL KL L LS N++
Sbjct: 71 NHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFT 130
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSR 199
L L+ +DLS+N+++ G+ + L L+ N + + L L
Sbjct: 131 QLINLQNLDLSFNQLSSLHPE-----LFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
LDLS N+LR+++ + F GL L+ L + HN LT + L +L LF+ N ++ L
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 260 KDFHGL-PVLCKADLAHNNIKAINI 283
L K DL N IKAI++
Sbjct: 246 CGMEWTWGTLEKLDLTGNEIKAIDL 270
Score = 183 (69.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 68/231 (29%), Positives = 109/231 (47%)
Query: 51 LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 109
LG L +N IT L+ ++L ++D NQI+ V+ D FQ L+ L + L +N+I
Sbjct: 64 LG-LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIF 122
Query: 110 SM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQV 168
+ N++ + L L L LS NQL+ + GL++L+T+ L N + R
Sbjct: 123 YLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR-----LF 177
Query: 169 QGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDIS 227
++ L L N + +L G+ L L L HN+L I+ F+ L SL L +
Sbjct: 178 WDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQ 237
Query: 228 HNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
N ++ L + LE+L ++ N + +D F +P L K L NN
Sbjct: 238 WNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNL-KILLMDNN 287
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/128 (32%), Positives = 65/128 (50%)
Query: 162 NEGKNQVQGVTN--IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
++G + V T+ L L+HN I L+ L+ L L HN++ T+ D F GL
Sbjct: 49 SQGFHSVPNATDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGL 108
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
LK L +S N + L T+ T L L+ L +S N L+ L + F+GL L L N+
Sbjct: 109 YKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNS 168
Query: 278 IKAINIQL 285
++ I ++L
Sbjct: 169 LRTIPVRL 176
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 208 (78.3 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 70/251 (27%), Positives = 124/251 (49%)
Query: 31 LVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVR 88
L + N + L D FSQL L+ ++N+I+++ + +GL KL+ + N+I +
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 89 RDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL ++ L NQ++S++ L GL KL L+L N L + + L
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA-LMGIHGLSRLDLSHNK 206
+DLS N++ R+ +N G+ + EL L+HN++ ++ A + + L L L NK
Sbjct: 186 LDLSTNRL-----RSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK 240
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGL 265
+ ++ +L+ LD++ N + ++ T +P L+ L + +N L LD K + L
Sbjct: 241 ISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSL 300
Query: 266 PVLCKADLAHN 276
L L+ N
Sbjct: 301 RSLTTVGLSGN 311
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 69/234 (29%), Positives = 117/234 (50%)
Query: 3 TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYANNN 59
+ L WL L++N++ ++ E L KL+ L++ N++ LP+ QL + L +L + N
Sbjct: 85 SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLIN-LQNLDLSFN 143
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
+++SL L GL KLQ ++ N + + F + +L+ + L N++ S+ + +G
Sbjct: 144 QLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAG 203
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L KL L+L HNQLT+ L L T+ L +NKI+ G G +L
Sbjct: 204 LIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTC---GMEWTWGTLE--KL 258
Query: 178 KLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L NEI+ +D + + L L + +NKL ++ L SL + +S NL
Sbjct: 259 DLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLSGNL 312
Score = 202 (76.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 68/251 (27%), Positives = 124/251 (49%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 65
L L +N + LE Q + S+L L ++ NQ+ + D Q +L L ++N+I L
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 66 GL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAY 123
L LQ ++ FNQ++ + + F L L ++ L++N + ++ L L +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L LS N+L + GL +LR + L +N++ K + + ++++ L LQ N+
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLR-----LSSLHTLFLQWNK 240
Query: 184 IENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I NL + G L +LDL+ N+++ I F + +LK+L + +N L +L+ L
Sbjct: 241 ISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSL 300
Query: 243 PALEELFVSHN 253
+L + +S N
Sbjct: 301 RSLTTVGLSGN 311
Score = 201 (75.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 62/205 (30%), Positives = 98/205 (47%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 140
N IT + RD+F + L + L +NQI+++ + GL KL L LS N++
Sbjct: 71 NHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFT 130
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSR 199
L L+ +DLS+N+++ G+ + L L+ N + + L L
Sbjct: 131 QLINLQNLDLSFNQLSSLHPE-----LFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
LDLS N+LR+++ + F GL L+ L + HN LT + L +L LF+ N ++ L
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 260 KDFHGL-PVLCKADLAHNNIKAINI 283
L K DL N IKAI++
Sbjct: 246 CGMEWTWGTLEKLDLTGNEIKAIDL 270
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 69/250 (27%), Positives = 116/250 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---AN 57
L +L L L+ N+L SL +L L KLQ L + N L +P ++LF SL +
Sbjct: 132 LINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP--VRLFWDCRSLEFLDLS 189
Query: 58 NNRITSL--DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
NR+ SL +G GL KL+ +++ NQ+T + F L +L ++ LQ N+I+++ +
Sbjct: 190 TNRLRSLARNGFA-GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGM 248
Query: 116 SGLT-KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L L L+ N++ L + L+ + + NK+N ++ N ++ +T +
Sbjct: 249 EWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKI--LNSLRSLTTV 306
Query: 175 FELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG---LDSLKMLDISHNLL 231
L E AL G + H+ L SPD G LD++ + NL
Sbjct: 307 -GLSGNLWECSPRICALASWLGSFQGRWEHSIL-CHSPDHTQGEDILDAVHGFQLCWNLS 364
Query: 232 TTLEETSKTF 241
TT+ + T+
Sbjct: 365 TTVTAMATTY 374
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/128 (32%), Positives = 65/128 (50%)
Query: 162 NEGKNQVQGVTN--IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
++G + V T+ L L+HN I L+ L+ L L HN++ T+ D F GL
Sbjct: 49 SQGFHSVPNTTDKGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGL 108
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
LK L +S N + L T+ T L L+ L +S N L+ L + F+GL L L N+
Sbjct: 109 YKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNS 168
Query: 278 IKAINIQL 285
++ I ++L
Sbjct: 169 LRTIPVRL 176
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 212 (79.7 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 83/336 (24%), Positives = 154/336 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQL-EALPSDIQLF-SQLGSLYANN 58
L+ L + LN+N++ S+ + LS L L +E N + + P + + L L +
Sbjct: 125 LSTLMSMNLNSNQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLLDVSG 184
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
N + ++ +LR L ++ N I+ + E NL L + +QNN + ++ +
Sbjct: 185 NCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHPMAFM 244
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+ +L YLYL N ++ + ++G K L +D+S N + + ++ + N+ +
Sbjct: 245 NVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALYALPS-------LKDLPNLKQ 297
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+++ N I ++ A L + + +N + IS + F LD L +L + +N L +E
Sbjct: 298 VRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIE 357
Query: 236 ETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAIN----------IQ 284
+ L++L + +N+LT LD F L L DL HN I I
Sbjct: 358 RGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFW 417
Query: 285 LALKTQCQIFGLNSTL------RIYLEGNPVLCDDS 314
L L +I G +++ I L+GN ++CD+S
Sbjct: 418 LDLSNN-KISGFKTSVFKKKISNILLDGNQLICDES 452
Score = 173 (66.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 78/311 (25%), Positives = 145/311 (46%)
Query: 8 LFLNNNRLKSLEGQLGT--LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 65
L N +K++ +GT + +L +L ++E+LP F+ L ++ N+ + S
Sbjct: 41 LSCNGEDVKTIAQTVGTSQIDELHILNGTDVKIESLP-----FNGLRTIAILNSTLQSFS 95
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 124
+ + ++ N + F NL L S++L +NQI+S+ + + +GL+ L L
Sbjct: 96 PTAWRHVEATIEHITINGNELKTVPVFGNLSTLMSMNLNSNQISSIPDKAFNGLSALTQL 155
Query: 125 YLSHNQLTEFLLDDIRGLKR-LRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L +N + +F + +K L +D+S N ++ + ++ N+ L L N
Sbjct: 156 RLENNAICDFPPKSLDAVKASLVLLDVSGNCLDAIPAQI-----LRNAANLMYLDLGSNN 210
Query: 184 IENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
I ++ LM + L L + +N LR I P F+ + L+ L + N+++TL+
Sbjct: 211 ISEINNFELMNLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGF 270
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQ--LALKTQCQIFGLNSTL 300
LE L VS+N+L + LP L DL N+K + + L K + F N L
Sbjct: 271 KNLEVLDVSNNAL-------YALPSL--KDLP--NLKQVRVDGNLITKIETLAFSNNPNL 319
Query: 301 R-IYLEGNPVL 310
+ I ++ N ++
Sbjct: 320 QLISVQNNNIV 330
Score = 148 (57.2 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 50/164 (30%), Positives = 80/164 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN---QLEALPSDIQLFSQLGSLYAN 57
G +L L ++NN L +L L L L+ + ++ N ++E L QL S+ N
Sbjct: 269 GFKNLEVLDVSNNALYALPS-LKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQ-N 326
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
NN + L KL V + N + + R F + NL +S++NN +T+++ SS +
Sbjct: 327 NNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFA 386
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 160
L L L L HN++ + L +L +DLS NKI+ F T
Sbjct: 387 QLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKISGFKT 430
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 210 (79.0 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 70/248 (28%), Positives = 122/248 (49%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 90
++ + LE +P +I ++ +L N ++ D + L L++ + NQI +
Sbjct: 53 VICARQHLEEVPDNISNNTRYLNLQENTIQVIKSD-TFKHLRHLEILQLSKNQIRQIEVG 111
Query: 91 EFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
F L NL+++ L +N++T + S + L+KL L+L +N + + LR +D
Sbjct: 112 AFNGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLD 171
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRT 209
L ++ K ++ G+ N+ L L ++++ L + L L+LS N+L
Sbjct: 172 LG--ELKKLDYISDAA--FVGLINLRYLNLGMCGLKDIPN-LTPLVRLEELELSGNRLEI 226
Query: 210 ISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVL 268
I P F GL+SL+ L + H+ ++ +E + L LEEL +SHNSL L D F L L
Sbjct: 227 IRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKL 286
Query: 269 CKADLAHN 276
+ L HN
Sbjct: 287 ERVHLNHN 294
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 45/162 (27%), Positives = 77/162 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN- 58
GL +LN L L +NRL + Q LSKL+ L + N +E LP F ++ SL +
Sbjct: 115 GLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPG--YAFHRVPSLRRLDL 172
Query: 59 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH---NLDSISLQNNQITSMN-SS 114
+ LD + + + N+ + + M + NL L+ + L N++ + S
Sbjct: 173 GELKKLD-YISDAAFVGLINLRYLNLGMCGLKDIPNLTPLVRLEELELSGNRLEIIRPGS 231
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
GL L L+L H+Q++ + LK L ++LS+N ++
Sbjct: 232 FQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLH 273
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 179 (68.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 89/323 (27%), Positives = 142/323 (43%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N ++ + G KL+ L + NQ+ L P Q L SL N+IT L
Sbjct: 225 LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS 284
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTKLAYLY 125
L GL LQ+ ++ N+I +R D FQ+LHNL+ +SL +N++ T + S L + ++
Sbjct: 285 LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMH 344
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG--VTNIFELKLQHNE 183
L+ N F+ D LK L L N I G R ++ + I K + +
Sbjct: 345 LAQNP---FICDC--HLKWLADY-LHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSG 398
Query: 184 IENLDGALMG--IHGLS----------RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
E+ L G L+ +D S+ KL I PD + L +++N
Sbjct: 399 TEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKI-PDHIPQYTA--ELRLNNNEF 455
Query: 232 TTLEETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALK 288
T LE T F LP L ++ +S+N +T +++ F G + + L N ++ N+Q +
Sbjct: 456 TVLEATG-IFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLE--NVQHKM- 511
Query: 289 TQCQIFGLNSTLRIYLEGNPVLC 311
GL S + L N + C
Sbjct: 512 ----FKGLESLKTLMLRSNRISC 530
Score = 136 (52.9 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 51/170 (30%), Positives = 84/170 (49%)
Query: 164 GKNQVQGVTN----IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
GK + TN I E++L+ N I + GA L RLDLS+N++ ++PD F GL
Sbjct: 206 GKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGL 265
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT--RLD--KDFHGLPVLCKADLA 274
SL L + N +T L ++ L +L+ L ++ N + R+D +D H L +L D
Sbjct: 266 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-- 323
Query: 275 HNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
N ++ + A T L + ++L NP +CD ++ + D + T
Sbjct: 324 -NKLQTV----AKGT---FSALRAIQTMHLAQNPFICDCHLKWLADYLHT 365
Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDD 214
NK T G Q + + L+L N ++ L +G L RLDLS N+++ I
Sbjct: 3 NKISTIERGA--FQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKA 60
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADL 273
F G +K L + +N ++ +E+ + L LE L +++N++TRL F+ +P L L
Sbjct: 61 FRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRL 120
Query: 274 AHNNI 278
NN+
Sbjct: 121 HSNNL 125
Score = 123 (48.4 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 34/123 (27%), Positives = 66/123 (53%)
Query: 13 NRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLDG-LLR 69
N++ ++E G L +L+ L + +N L+ P + L ++L L + N+I ++ R
Sbjct: 3 NKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFR 62
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSH 128
G ++ +D+NQI+ + F+ L +L+ ++L NN IT ++ +S + + KL L
Sbjct: 63 GAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHS 122
Query: 129 NQL 131
N L
Sbjct: 123 NNL 125
Score = 102 (41.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 39/142 (27%), Positives = 68/142 (47%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T +L N N+F T E + + + ++ L +N+I +++ GA G G++ + L+ N
Sbjct: 445 TAELRLNN-NEF-TVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSN 502
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHG- 264
+L + F GL+SLK L + N ++ + S T L ++ L + N +T + G
Sbjct: 503 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGT 562
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N LA
Sbjct: 563 LHSLSTLNLLANPFNC-NCHLA 583
Score = 92 (37.4 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIR 140
N+I+ + R FQ+L L+ + L N + L G KL L LS NQ+ R
Sbjct: 3 NKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFR 62
Query: 141 GLKRLRTVDLSYNKIN 156
G ++ + L YN+I+
Sbjct: 63 GAVDIKNLQLDYNQIS 78
Score = 46 (21.3 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQL 38
L DL L LNNN + L + KL+ + N L
Sbjct: 88 LRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 125
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 150 (57.9 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 44/157 (28%), Positives = 78/157 (49%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L N +T D GLK LR + L N+I+ + +G+ + ++L N
Sbjct: 57 LDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIE-----RGAFEGLKQLERIRLNRNR 111
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L LSRLDLS N+++ + F G+ ++K L + N ++ +E+ + L
Sbjct: 112 LQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRAL 171
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNI 278
LE L +++N++T + F+ +P L L NN+
Sbjct: 172 RDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNL 208
Score = 149 (57.5 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 42/135 (31%), Positives = 74/135 (54%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL +L L L NN++ +E G L +L+ + + +N+L+ LP + Q ++L L +
Sbjct: 74 GLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSE 133
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N+I ++ RG+T ++ +D N I+ + F+ L +L+ ++L NN IT + SS +
Sbjct: 134 NQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITLIPLSSFN 193
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L L N L
Sbjct: 194 HMPKLRTLRLHSNNL 208
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 81/325 (24%), Positives = 146/325 (44%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-G 66
L N +K++ G T KL+ + + +NQ+ + D L SL N+I + G
Sbjct: 306 LEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKG 365
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 125
L GL LQ+ ++ N+I +R + F++L NL+ +SL +N++ +++ L + L + L+
Sbjct: 366 LFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLH 425
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG--VTNIFELKLQHNE 183
L+ N F+ D LK L L N I G R ++ ++ + K +
Sbjct: 426 LAQNP---FMCDC--HLKWLADY-LFDNPIETSGARCSHPRRLANKRISQVKGKKFRCTG 479
Query: 184 IENLDGALMG--IHGL---SR-------LDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
E+ L G L R +D S+ KL I P L++ D N +
Sbjct: 480 AEDYRSRLSGECFQDLVCPERCRCEGTVVDCSNLKLTKIPPHLPEHTTDLRLND---NEI 536
Query: 232 TTLEETSK-TFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
+ LE T LP L ++ +S+N L + + F G + + L N +++++ ++ K
Sbjct: 537 SILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRM-FKG 595
Query: 290 QCQIFGLNSTLRIYLEGNPVLCDDS 314
+ GL + + L N + C D+
Sbjct: 596 ---LIGLKTLM---LRSNQISCVDN 614
Score = 137 (53.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 40/148 (27%), Positives = 71/148 (47%)
Query: 12 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLL-R 69
NN + + L L++L +E NQ+ + + QL + N NR+ L LL +
Sbjct: 62 NNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQ 121
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSH 128
TKL ++ NQI V R F+ + + ++ L +N I+ + + + L L L L++
Sbjct: 122 STTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNN 181
Query: 129 NQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
N +T L + +LRT+ L N ++
Sbjct: 182 NNITLIPLSSFNHMPKLRTLRLHSNNLH 209
Score = 132 (51.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 40/134 (29%), Positives = 70/134 (52%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL N + I+ DF GL +L++L + +N ++ +E + L LE + ++ N L L
Sbjct: 56 RLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVL 115
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F L + DL+ N I+A+ + A + G+ + + L+ N + C D +
Sbjct: 116 PELLFQSTTKLSRLDLSENQIQAVP-RKAFR------GITTVKNLQLDSNHISCIEDGAF 168
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 169 RALRDLEILTLNNN 182
Score = 130 (50.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 35 QNQ-LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 92
Q Q + +P I ++ L NN RIT +D GL L+V +++ NQI+++ R F
Sbjct: 39 QGQAFKTVPRGIPRNAERLDLDRNNITRITKVD--FSGLKNLRVLHLENNQISVIERGAF 96
Query: 93 QNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
+ L L+ I L N++ + L TKL+ L LS NQ+ RG+ ++ + L
Sbjct: 97 EGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLD 156
Query: 152 YNKIN 156
N I+
Sbjct: 157 SNHIS 161
Score = 117 (46.2 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 45/168 (26%), Positives = 77/168 (45%)
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
I E++L+ N I+N+ GA L R+DLS N++ I+ D F GL SL L + N +
Sbjct: 301 IVEIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIA 360
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQC 291
+ + L +L+ L ++ N + L + F L L L N ++ I+ L
Sbjct: 361 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAP--- 417
Query: 292 QIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
L + ++L NP +CD ++ + D + +N + G P
Sbjct: 418 ----LRAIKTLHLAQNPFMCDCHLKWLADYL--FDNPIETSGARCSHP 459
Score = 106 (42.4 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 43/140 (30%), Positives = 64/140 (45%)
Query: 176 ELKLQHNEIENLD--GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+L+L NEI L+ GA + L +++LS+NKLR I F G + L ++ N L +
Sbjct: 528 DLRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQS 587
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
+ L L+ L + N ++ +D F GL + L N I I A T
Sbjct: 588 VSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTI-APGAFNT--- 643
Query: 293 IFGLNSTLRIYLEGNPVLCD 312
L+S I L NP +CD
Sbjct: 644 ---LHSLSTINLLSNPYVCD 660
Score = 99 (39.9 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 35/132 (26%), Positives = 66/132 (50%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
T DL N N+ E + + N+ ++ L +N++ ++ +GA G G+ L L+ N
Sbjct: 526 TTDLRLND-NEISIL-EATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGN 583
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
KL+++S F GL LK L + N ++ ++ + T L ++ L + N ++ + F+
Sbjct: 584 KLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNT 643
Query: 265 LPVLCKADLAHN 276
L L +L N
Sbjct: 644 LHSLSTINLLSN 655
Score = 96 (38.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 32/111 (28%), Positives = 64/111 (57%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQL-G--SLYA 56
L +L + L+NN+L+ + EG G L+LL + N+L+++ ++F L G +L
Sbjct: 548 LPNLRKINLSNNKLRDIREGAFDGAGGVLELL-LTGNKLQSVSG--RMFKGLIGLKTLML 604
Query: 57 NNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 106
+N+I+ +D GL+ +++ ++ N+I+ + F LH+L +I+L +N
Sbjct: 605 RSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSN 655
Score = 90 (36.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 31/106 (29%), Positives = 51/106 (48%)
Query: 103 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 162
L+ N +TS+ L L +L L LS+N ++ + +L T+ LSYN+I R
Sbjct: 752 LEGNLLTSVPKELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQI-----RC 806
Query: 163 EGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKL 207
+ G+ ++ L L N++ + +GA + LS L L N L
Sbjct: 807 VPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGANPL 852
Score = 88 (36.0 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 140 RGLKRL-RTVDLSYNKINKFGTR-NEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHG 196
RGL+ L +T+ ++ G ++ + + L L +N I +L +
Sbjct: 734 RGLRSLPKTIPKDTTELYLEGNLLTSVPKELPNLKQLTLLDLSNNSISHLAPLTFSNMTQ 793
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
L+ L LS+N++R + F GL SL++L + N L+T+ E + L +L L + N L
Sbjct: 794 LATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGANPL 852
Score = 88 (36.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 3 TDLNWLFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS---LYAN 57
TDL LN+N + LE G L L+ + + N+L + F G L
Sbjct: 527 TDLR---LNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGA--FDGAGGVLELLLT 581
Query: 58 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSL 115
N++ S+ G + +GL L+ + NQI+ V F L ++ +SL +N+I+++ +
Sbjct: 582 GNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAF 641
Query: 116 SGLTKLAYLYLSHN 129
+ L L+ + L N
Sbjct: 642 NTLHSLSTINLLSN 655
Score = 86 (35.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 54 LYANNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 111
L N+N I+ L+ G + L L+ N+ N++ +R F + + L N++ S+
Sbjct: 529 LRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSV 588
Query: 112 NSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
+ + GL L L L NQ++ GL +R + L N+I+
Sbjct: 589 SGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRIS 634
Score = 82 (33.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 28/127 (22%), Positives = 60/127 (47%)
Query: 31 LVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMV 87
L + N++ L + + L + +NN++ + +G G + + N++ V
Sbjct: 529 LRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSV 588
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
F+ L L ++ L++NQI+ + N++ +GL+ + L L N+++ L L
Sbjct: 589 SGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLS 648
Query: 147 TVDLSYN 153
T++L N
Sbjct: 649 TINLLSN 655
Score = 76 (31.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 23/89 (25%), Positives = 40/89 (44%)
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
G+ + L N ++ I F LK +D+S N ++ + E + + L +L L + N +
Sbjct: 300 GIVEIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKI 359
Query: 256 TRLDKD-FHGLPVLCKADLAHNNIKAINI 283
+ K F GL L L N I + +
Sbjct: 360 AEIPKGLFDGLVSLQLLLLNANKINCLRV 388
Score = 74 (31.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
EL L+ N + ++ L + L+ LDLS+N + ++P F + L L +S+N + +
Sbjct: 749 ELYLEGNLLTSVPKELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVP 808
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
+ L +L L + N L+ + + F+ L L L N
Sbjct: 809 VHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGAN 850
Score = 74 (31.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 32/120 (26%), Positives = 53/120 (44%)
Query: 198 SRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTR 257
+ L L N L ++ P + L L +LD+S+N ++ L + + + L L +S+N +
Sbjct: 748 TELYLEGNLLTSV-PKELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRC 806
Query: 258 LDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMR 316
+ F GL L L H N L+ + L S + L NP+ CD +R
Sbjct: 807 VPVHAFDGLRSLRLLTL-HGN------DLSTVPEGAFNHLTSLSHLALGANPLYCDCELR 859
Score = 57 (25.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 24/95 (25%), Positives = 41/95 (43%)
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
L KT EL++ N LT + K+ L L DL++N+I + L Q+
Sbjct: 736 LRSLPKTIPKDTTELYLEGNLLTSVPKELPNLKQLTLLDLSNNSISHL-APLTFSNMTQL 794
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNN 328
L + + PV D +R++ + T++ N
Sbjct: 795 ATLILSYN-QIRCVPVHAFDGLRSL--RLLTLHGN 826
>UNIPROTKB|F1MCA7 [details] [associations]
symbol:LRRC7 "Leucine-rich repeat-containing protein 7"
species:9913 "Bos taurus" [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00595 Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001478
PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228 GO:GO:0005886
GO:GO:0005737 GO:GO:0014069 GO:GO:0030054 GO:GO:0045211
SUPFAM:SSF50156 InterPro:IPR025875 Pfam:PF12799 EMBL:DAAA02008400
EMBL:DAAA02008401 EMBL:DAAA02008402 EMBL:DAAA02008403
EMBL:DAAA02008404 IPI:IPI01000778 UniGene:Bt.38250 Uniprot:F1MCA7
Length = 1536
Score = 213 (80.0 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 77/281 (27%), Positives = 130/281 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+LN+ L+ L G L+KL++L + +N L+ LP + +QL L NN
Sbjct: 137 LLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF 196
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+ L +L + L+ MD N + ++ L L + + N+I +++ +SG L
Sbjct: 197 SELPEVLDQIQNLRELWMDNNALQVL--PGVWKLKMLVYLDMSKNRIETVDMDISGCEAL 254
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L + L D I LK+L T+ + N++ N + ++ + E
Sbjct: 255 EDLLLSSNMLQQ-LPDSIGLLKKLTTLKVDDNQLTIL------PNTIGNLSLLEEFDCSC 307
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL-EETSKT 240
NE+E+L + +H L L + N L + P + ++ ++ + N L L EE +
Sbjct: 308 NELESLPSTIGYLHSLRTLAVDENFLPEL-PREIGSCKNVTVMSLRSNKLEFLPEEIGQ- 365
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ L L +S N L L F L L L+ N KA+
Sbjct: 366 -MQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 405
Score = 200 (75.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 78/277 (28%), Positives = 129/277 (46%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L+L+ N+++ L QL L+ L I N L LP+ I L L + N +
Sbjct: 48 LEELYLDANQIEELPKQLFNCQALKKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L + N I+ + D F L NL + L + + + ++ L KL L
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLP-DGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRIL 166
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N L + L + L +L +DL N N+F E +Q+Q N+ EL + +N +
Sbjct: 167 ELRENHL-KTLPKSMHKLAQLERLDLG-N--NEFSELPEVLDQIQ---NLRELWMDNNAL 219
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
+ L G + + L LD+S N++ T+ D G ++L+ L +S N+L L + S L
Sbjct: 220 QVLPG-VWKLKMLVYLDMSKNRIETVDMD-ISGCEALEDLLLSSNMLQQLPD-SIGLLKK 276
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L L V N LT L L +L + D + N ++++
Sbjct: 277 LTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESL 313
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 65/296 (21%), Positives = 124/296 (41%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L ++ N ++ + L ++ N + LP L LY N+ +
Sbjct: 91 LVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFL 150
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L L KL++ + N + + + L L+ + L NN+ + + L + L
Sbjct: 151 EFLPANFGRLAKLRILELRENHLKTLPKS-MHKLAQLERLDLGNNEFSELPEVLDQIQNL 209
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L++ +N L +L + LK L +D+S N+I + G + +L L
Sbjct: 210 RELWMDNNALQ--VLPGVWKLKMLVYLDMSKNRIETVDM------DISGCEALEDLLLSS 261
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N ++ L ++ + L+ L + N+L TI P+ L L+ D S N L +L T +
Sbjct: 262 NMLQQLPDSIGLLKKLTTLKVDDNQL-TILPNTIGNLSLLEEFDCSCNELESLPSTIG-Y 319
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L +L L V N L L ++ + L N ++ + ++ + ++ L+
Sbjct: 320 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLS 375
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 58/211 (27%), Positives = 100/211 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
+ +L L+++NN L+ L G + L L L + +N++E + DI L L ++N +
Sbjct: 206 IQNLRELWMDNNALQVLPG-VWKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNML 264
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L + L KL +D NQ+T++ + NL L+ N++ S+ S++ L L
Sbjct: 265 QQLPDSIGLLKKLTTLKVDDNQLTILP-NTIGNLSLLEEFDCSCNELESLPSTIGYLHSL 323
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L + N L E L +I K + + L NK+ +F G+ Q V N L
Sbjct: 324 RTLAVDENFLPE-LPREIGSCKNVTVMSLRSNKL-EFLPEEIGQMQKLRVLN-----LSD 376
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISP 212
N ++NL + + L+ L LS N+ + + P
Sbjct: 377 NRLKNLPFSFTKLKELAALWLSDNQSKALIP 407
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 46/154 (29%), Positives = 74/154 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G L L L++N L+ L +G L KL L ++ NQL LP+ I S L + N
Sbjct: 250 GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNE 309
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ SL + L L+ +D N + + R E + N+ +SL++N++ + + + K
Sbjct: 310 LESLPSTIGYLHSLRTLAVDENFLPELPR-EIGSCKNVTVMSLRSNKLEFLPEEIGQMQK 368
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L L LS N+L + LK L + LS N+
Sbjct: 369 LRVLNLSDNRLKNLPFSFTK-LKELAALWLSDNQ 401
>UNIPROTKB|O62702 [details] [associations]
symbol:KERA "Keratocan" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0061303 "cornea development in camera-type eye" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0061303
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 EMBL:U48360 EMBL:AF036962 EMBL:BC120375
IPI:IPI00691502 RefSeq:NP_776335.1 UniGene:Bt.5391
ProteinModelPortal:O62702 STRING:O62702 PRIDE:O62702
Ensembl:ENSBTAT00000019066 GeneID:280785 KEGG:bta:280785 CTD:11081
InParanoid:O62702 KO:K08123 OrthoDB:EOG4KSPK3 NextBio:20804946
Uniprot:O62702
Length = 352
Score = 202 (76.2 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 57/215 (26%), Positives = 107/215 (49%)
Query: 3 TDLNWLFLNNNRLKSL---EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L W+ LN N++ + +G L L KL L +E N+LE +PS + L L N
Sbjct: 95 TQLRWINLNKNKITNYGIEKGALSQLKKLLFLFLEDNELEEVPSPLP--RSLEQLQLARN 152
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
+++ + G L L + ++ N++ +RD F+ L NL +++ N + +M L
Sbjct: 153 KVSRIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLP 212
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
T ++L +N + + + ++ + L++NK++ G + G N V++I +
Sbjct: 213 ANTM--QVFLDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFN----VSSILD 266
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
L+L HN++ + + H L L L HNK+R ++
Sbjct: 267 LQLSHNQLTKVPK--ISAH-LQHLHLDHNKIRNVN 298
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 64/261 (24%), Positives = 124/261 (47%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITM--V 87
L E L+ +P+ + S++ LY NN I ++ + T+L+ N++ N+IT +
Sbjct: 56 LYCENRGLKEIPA---IPSRIWYLYLENNLIETIPEKPFENATQLRWINLNKNKITNYGI 112
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
+ L L + L++N++ + S L L L L+ N+++ L+ L
Sbjct: 113 EKGALSQLKKLLFLFLEDNELEEVPSPLP--RSLEQLQLARNKVSRIPQGTFSNLENLTL 170
Query: 148 VDLSYNKI--NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+DL +NK+ N F ++ +G+ N+ +L + N + N+ L ++ L +N
Sbjct: 171 LDLQHNKLLDNAFQ-----RDTFKGLKNLMQLNMAKNALRNMPPRLPA--NTMQVFLDNN 223
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF-LPALEELFVSHNSLTRLDKDFHG 264
+ I + F + + L ++HN L+ S F + ++ +L +SHN LT++ K
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFNVSSILDLQLSHNQLTKVPKISAH 283
Query: 265 LPVLCKADLAHNNIKAINIQL 285
L L L HN I+ +N+ +
Sbjct: 284 LQHL---HLDHNKIRNVNVSV 301
Score = 169 (64.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 70/261 (26%), Positives = 119/261 (45%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD- 65
L+ N LK + S++ L +E N +E +P + +QL + N N+IT+
Sbjct: 56 LYCENRGLKEIPA---IPSRIWYLYLENNLIETIPEKPFENATQLRWINLNKNKITNYGI 112
Query: 66 --GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLA 122
G L L KL ++ N++ V ++L L L N+++ + + S L L
Sbjct: 113 EKGALSQLKKLLFLFLEDNELEEVPSPLPRSLEQLQ---LARNKVSRIPQGTFSNLENLT 169
Query: 123 YLYLSHNQLTE--FLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L HN+L + F D +GLK L ++++ N + R N +Q +F L
Sbjct: 170 LLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA-NTMQ----VF---LD 221
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTIS-PDDFIGLDSLKMLDISHNLLTTLEETS 238
+N IE + + I ++ L L+HNKL P + S+ L +SHN LT + + S
Sbjct: 222 NNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFNVSSILDLQLSHNQLTKVPKIS 281
Query: 239 KTFLPALEELFVSHNSLTRLD 259
L+ L + HN + ++
Sbjct: 282 AH----LQHLHLDHNKIRNVN 298
Score = 150 (57.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 60/239 (25%), Positives = 111/239 (46%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
+LY N + + + + L + N N I + F+N L I+L N+IT+
Sbjct: 55 ALYCENRGLKEIPAIPSRIWYLYLEN---NLIETIPEKPFENATQLRWINLNKNKITNYG 111
Query: 113 ---SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
+LS L KL +L+L N+L E R L++L+ L+ NK+++ +
Sbjct: 112 IEKGALSQLKKLLFLFLEDNELEEVPSPLPRSLEQLQ---LARNKVSRIP-----QGTFS 163
Query: 170 GVTNIFELKLQHNEIENLDGALM-----GIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
+ N+ L LQHN++ LD A G+ L +L+++ N LR + P + +++++
Sbjct: 164 NLENLTLLDLQHNKL--LDNAFQRDTFKGLKNLMQLNMAKNALRNMPPR--LPANTMQVF 219
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADL--AHNNIKAI 281
+ +N + + E +P + L ++HN L+ G V DL +HN + +
Sbjct: 220 -LDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFNVSSILDLQLSHNQLTKV 277
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 159 (61.0 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 49/157 (31%), Positives = 78/157 (49%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T D GL+ LR + L NKI T G Q + + L+L N
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKIT---TIERGA--FQDLKELERLRLNRNH 114
Query: 184 IENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L +G L RLDLS N+++ I F G +K L + +N ++ +E+ + L
Sbjct: 115 LQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRAL 174
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNI 278
LE L +++N++TRL F+ +P L L NN+
Sbjct: 175 RDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 151 (58.2 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 41/124 (33%), Positives = 64/124 (51%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N +K + G KL+ + + NQ+ L P Q L SL N+IT L
Sbjct: 309 LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS 368
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTKLAYLY 125
L GL LQ+ ++ N+I +R D FQ+LHNL+ +SL +N++ T + S L + ++
Sbjct: 369 LFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMH 428
Query: 126 LSHN 129
L+ N
Sbjct: 429 LAQN 432
Score = 140 (54.3 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 42/151 (27%), Positives = 74/151 (49%)
Query: 100 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKF 158
++ N ++T + + T A L L++N+ T I + L +LR ++ S NKI
Sbjct: 518 TVDCSNQKLTKIPDHIPQYT--AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 575
Query: 159 GTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIG 217
EG +G + + E+ L N +EN+ + G+ L L L N++ + D FIG
Sbjct: 576 ---EEGA--FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIG 630
Query: 218 LDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
L S+++L + N +TT+ + L +L L
Sbjct: 631 LSSVRLLSLYDNQITTIAPGAFDTLHSLSTL 661
Score = 134 (52.2 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 50/170 (29%), Positives = 86/170 (50%)
Query: 164 GKNQVQGVTN----IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
GK + TN I E++L+ N I+ + GA L R+DLS+N++ ++PD F GL
Sbjct: 290 GKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL 349
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT--RLD--KDFHGLPVLCKADLA 274
SL L + N +T L ++ L +L+ L ++ N + R+D +D H L +L D
Sbjct: 350 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-- 407
Query: 275 HNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
N ++ I A T + + + ++L NP +CD ++ + D + T
Sbjct: 408 -NKLQTI----AKGTFSPLRAIQT---MHLAQNPFICDCHLKWLADYLHT 449
Score = 132 (51.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANN 58
GL L L L N++ ++E G L +L+ L + +N L+ P + L S+L L +
Sbjct: 77 GLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSE 136
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N+I ++ RG ++ +D+N I+ + F+ L +L+ ++L NN IT ++ +S +
Sbjct: 137 NQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNITRLSVASFN 196
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 197 HMPKLRTFRLHSNNL 211
Score = 131 (51.2 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL+ N + I+ DF GL L++L + N +TT+E + L LE L ++ N L
Sbjct: 59 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLF 118
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F G L + DL+ N I+AI + A + I L L+ N + C D +
Sbjct: 119 PELLFLGTSKLYRLDLSENQIQAIP-RKAFRGAVDIKNLQ------LDYNHISCIEDGAF 171
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 172 RALRDLEVLTLNNN 185
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 41/161 (25%), Positives = 71/161 (44%)
Query: 97 NLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N + + L N IT + + +GL L L L N++T + LK L + L+ N +
Sbjct: 56 NTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHL 115
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDD 214
F + G + ++ L L N+I+ + A G + L L +N + I
Sbjct: 116 QLFP-----ELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGA 170
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
F L L++L +++N +T L S +P L + N+L
Sbjct: 171 FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 128 (50.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 39/121 (32%), Positives = 58/121 (47%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L ++P +I ++ L NN RIT D GL L+V + N+IT + R FQ+L
Sbjct: 46 LRSVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRVLQLMENKITTIERGAFQDLK 103
Query: 97 NLDSISLQNNQITSMNSSLS-GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N + L G +KL L LS NQ+ RG ++ + L YN I
Sbjct: 104 ELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHI 163
Query: 156 N 156
+
Sbjct: 164 S 164
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 42/139 (30%), Positives = 71/139 (51%)
Query: 94 NL-HNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
NL + I L+ N I + + S KL + LS+NQ++E D +GL+ L ++ L
Sbjct: 299 NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 358
Query: 152 YNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTI 210
NKI + K+ +G+ ++ L L N+I L A +H L+ L L NKL+TI
Sbjct: 359 GNKITELP-----KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI 413
Query: 211 SPDDFIGLDSLKMLDISHN 229
+ F L +++ + ++ N
Sbjct: 414 AKGTFSPLRAIQTMHLAQN 432
Score = 119 (46.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 35/92 (38%), Positives = 52/92 (56%)
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 124
G+ R +T+L +D NQ T+V + E N +L I L NN+I+++ N S S +T+L L
Sbjct: 753 GIPRDVTELY---LDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 808
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
LS+N+L GLK LR + L N I+
Sbjct: 809 ILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 840
Score = 113 (44.8 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 39/149 (26%), Positives = 72/149 (48%)
Query: 11 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLL 68
+N +L + + + +L+L E LEA + QL + +NN+IT ++ G
Sbjct: 522 SNQKLTKIPDHIPQYTAELRLNNNEFTVLEAT-GIFKKLPQLRKINFSNNKITDIEEGAF 580
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLS 127
G + + + N++ V+ F+ L +L ++ L++N+I+ + N S GL+ + L L
Sbjct: 581 EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLY 640
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
NQ+T L L T++L N N
Sbjct: 641 DNQITTIAPGAFDTLHSLSTLNLLANPFN 669
Score = 96 (38.9 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + + L L LS+N+LR I P F GL SL++L + N ++ +
Sbjct: 784 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP 843
Query: 236 ETSKTFLPALEELFVSHNSL 255
E + L AL L + N L
Sbjct: 844 EGAFNDLAALSHLAIGANPL 863
Score = 94 (38.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN LE G L +L+ + N++ + + S + + +NR+ ++
Sbjct: 540 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 599
Query: 65 DG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
+ +GL L+ + N+I+ V D F L ++ +SL +NQIT++ + L L+
Sbjct: 600 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLS 659
Query: 123 YLYLSHN 129
L L N
Sbjct: 660 TLNLLAN 666
Score = 93 (37.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 29/113 (25%), Positives = 57/113 (50%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T +L N N+F T E + + + ++ +N+I +++ GA G G++ + L+ N
Sbjct: 537 TAELRLNN-NEF-TVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 594
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
+L + F GL+SLK L + N ++ + S L ++ L + N +T +
Sbjct: 595 RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTI 647
Score = 84 (34.6 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 31/125 (24%), Positives = 58/125 (46%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N+ T+ P + L ++D+S+N ++TL S + + L L +S+N L
Sbjct: 758 VTELYLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 816
Query: 257 RLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ + F GL L L N+I + + L + + + NP+ CD +M
Sbjct: 817 CIPPRTFDGLKSLRLLSLHGNDISVV-------PEGAFNDLAALSHLAIGANPLYCDCNM 869
Query: 316 RAVID 320
+ + D
Sbjct: 870 QWLSD 874
Score = 82 (33.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 28/109 (25%), Positives = 50/109 (45%)
Query: 176 ELKLQHNEIENLD--GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
EL+L +NE L+ G + L +++ S+NK+ I F G + + ++ N L
Sbjct: 539 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 598
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
++ L +L+ L + N ++ + D F GL + L N I I
Sbjct: 599 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTI 647
Score = 79 (32.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 26/105 (24%), Positives = 49/105 (46%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
++ EL L N+ + L L+ +DLS+N++ T+S F + L L +S+N L
Sbjct: 757 DVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 816
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
+ + L +L L + N ++ + + F+ L L + N
Sbjct: 817 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGAN 861
Score = 79 (32.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 29/109 (26%), Positives = 46/109 (42%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
LYL NQ T + ++ K L +DLS N+I+ ++ +T + L L +N
Sbjct: 761 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQS-----FSNMTQLLTLILSYNR 814
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ + G+ L L L N + + F L +L L I N L
Sbjct: 815 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPL 863
Score = 72 (30.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 25/84 (29%), Positives = 48/84 (57%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD--IQLFS-QLGSLYA 56
G + +N + L +NRL++++ ++ L L+ L++ N++ + +D I L S +L SLY
Sbjct: 582 GASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLY- 640
Query: 57 NNNRITSL-DGLLRGLTKLQVFNM 79
+N+IT++ G L L N+
Sbjct: 641 -DNQITTIAPGAFDTLHSLSTLNL 663
>RGD|1305816 [details] [associations]
symbol:Kera "keratocan" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0061303 "cornea development in camera-type eye"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1305816 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0061303 EMBL:CH473960 GeneTree:ENSGT00600000084286 CTD:11081
KO:K08123 OrthoDB:EOG4KSPK3 OMA:RWINLNK IPI:IPI00206593
RefSeq:NP_001101557.1 UniGene:Rn.9330 Ensembl:ENSRNOT00000006234
GeneID:314771 KEGG:rno:314771 UCSC:RGD:1305816 NextBio:668195
Uniprot:D3ZVD7
Length = 351
Score = 201 (75.8 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 57/215 (26%), Positives = 106/215 (49%)
Query: 3 TDLNWLFLNNNRLKSL---EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L W+ LN N++ + +G L L KL L +E N+LE +PS + L L N
Sbjct: 96 TQLRWINLNKNKITNYGIEKGALSQLKKLLFLFLEDNELEEVPSPLP--RSLEQLQLARN 153
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
+++S+ G L L + ++ N++ +RD F+ L NL +++ N + +M L
Sbjct: 154 KVSSIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLP 213
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
T L+L +N + + + ++ + L++NK++ G + G + V++I +
Sbjct: 214 ANTM--QLFLDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSRGFD----VSSILD 267
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
L+L HN++ N L L L HNK++ ++
Sbjct: 268 LQLSHNQLTNFPRINAN---LQHLHLDHNKIKNVN 299
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 68/257 (26%), Positives = 117/257 (45%)
Query: 26 SKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDF 81
S+++ L +E N +E +P + +QL + N N+IT+ G L L KL ++
Sbjct: 72 SRIRYLYLENNLIETIPEKPFENATQLRWINLNKNKITNYGIEKGALSQLKKLLFLFLED 131
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTE--FLLDD 138
N++ V ++L L L N+++S+ + S L L L L HN+L + F D
Sbjct: 132 NELEEVPSPLPRSLEQLQ---LARNKVSSIPQGTFSNLENLTLLDLQHNKLLDNAFQRDT 188
Query: 139 IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGL 197
+GLK L ++++ N + R N +L L +N IE + + I +
Sbjct: 189 FKGLKNLMQLNMAKNALRNMPPRLPA--------NTMQLFLDNNSIEGIPENYFNVIPKV 240
Query: 198 SRLDLSHNKLRTIS-PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
+ L L+HNKL P + S+ L +SHN LT + L+ L + HN +
Sbjct: 241 AFLRLNHNKLSDAGLPSRGFDVSSILDLQLSHNQLTNFPRINAN----LQHLHLDHNKIK 296
Query: 257 RLDKDFHGLPVLCKADL 273
++ + V+C + L
Sbjct: 297 NVN-----MSVICPSTL 308
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 67/277 (24%), Positives = 127/277 (45%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
+LY N +T + + ++++ ++ N I + F+N L I+L N+IT+
Sbjct: 56 ALYCENRGLTEIPAIP---SRIRYLYLENNLIETIPEKPFENATQLRWINLNKNKITNYG 112
Query: 113 ---SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
+LS L KL +L+L N+L E R L++L+ L+ NK++ +
Sbjct: 113 IEKGALSQLKKLLFLFLEDNELEEVPSPLPRSLEQLQ---LARNKVSSIP-----QGTFS 164
Query: 170 GVTNIFELKLQHNEIENLDGALM-----GIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
+ N+ L LQHN++ LD A G+ L +L+++ N LR + P + +++++
Sbjct: 165 NLENLTLLDLQHNKL--LDNAFQRDTFKGLKNLMQLNMAKNALRNMPPR--LPANTMQLF 220
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQ 284
+ +N + + E +P + L ++HN L+ G V DL ++ + N
Sbjct: 221 -LDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSRGFDVSSILDLQLSHNQLTNFP 279
Query: 285 LALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDA 321
+ Q L+ +I V+C ++RA DA
Sbjct: 280 -RINANLQHLHLDHN-KIKNVNMSVICPSTLRAGQDA 314
>TAIR|locus:2074728 [details] [associations]
symbol:PIRL9 "plant intracellular ras group-related LRR
9" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0009555 "pollen development" evidence=IGI]
[GO:0055046 "microgametogenesis" evidence=IGI] [GO:0016132
"brassinosteroid biosynthetic process" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0055046 InterPro:IPR025875 Pfam:PF12799
EMBL:AY072078 EMBL:AY122958 EMBL:AY849579 IPI:IPI00535260
RefSeq:NP_187741.2 UniGene:At.39776 ProteinModelPortal:Q8VYG9
SMR:Q8VYG9 PaxDb:Q8VYG9 PRIDE:Q8VYG9 EnsemblPlants:AT3G11330.1
GeneID:820306 KEGG:ath:AT3G11330 TAIR:At3g11330
HOGENOM:HOG000239210 InParanoid:Q8VYG9 OMA:HASANPV PhylomeDB:Q8VYG9
ProtClustDB:CLSN2686671 ArrayExpress:Q8VYG9 Genevestigator:Q8VYG9
Uniprot:Q8VYG9
Length = 499
Score = 205 (77.2 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 69/242 (28%), Positives = 120/242 (49%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL LN L+NN+L+S+ + L L L + N LE LP I L S+L L + N+
Sbjct: 222 GLLVLN---LSNNKLESIPDSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNK 278
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
+TSL D + R L + ++ FN++T + + L NL+ + +Q N+I S +S+ +
Sbjct: 279 LTSLPDSICR-CGSLVILDVSFNRLTYLPTNIGPELVNLEKLLVQYNKIRSFPTSIGEMR 337
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L +L N+L L D L L ++LS N F + + ++ EL L
Sbjct: 338 SLKHLDAHFNELNG-LPDSFVLLTNLEYLNLSSN----FSDLKDLPFSFGELISLQELDL 392
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI--GLDSLKMLDISHNLLTTLEET 237
+N+I L + L++L++ N L + P++ + G++++K + ++ LEE
Sbjct: 393 SNNQIHALPDTFGTLDSLTKLNVDQNPL-VVPPEEVVKEGVEAVKTY-MGQRRISMLEEE 450
Query: 238 SK 239
K
Sbjct: 451 EK 452
Score = 191 (72.3 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 63/213 (29%), Positives = 111/213 (52%)
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 125
G ++GL V N+ N++ + D LH+L + + N + ++ S+ L+KL L
Sbjct: 218 GRIQGLL---VLNLSNNKLESIP-DSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILN 273
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIE 185
+S N+LT L D I L +D+S+N++ T N G V N+ +L +Q+N+I
Sbjct: 274 VSTNKLTS-LPDSICRCGSLVILDVSFNRLTYLPT-NIGPELV----NLEKLLVQYNKIR 327
Query: 186 NLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF--LP 243
+ ++ + L LD N+L + PD F+ L +L+ L++S N + L++ +F L
Sbjct: 328 SFPTSIGEMRSLKHLDAHFNELNGL-PDSFVLLTNLEYLNLSSNF-SDLKDLPFSFGELI 385
Query: 244 ALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
+L+EL +S+N + L F L L K ++ N
Sbjct: 386 SLQELDLSNNQIHALPDTFGTLDSLTKLNVDQN 418
Score = 188 (71.2 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 64/258 (24%), Positives = 129/258 (50%)
Query: 10 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 69
L+ +L+ L G + L +L + N+LE++P I L L + N + +L +
Sbjct: 205 LSGRKLRLLPEAFGRIQGLLVLNLSNNKLESIPDSIAGLHSLVELDVSTNSLETLPDSIG 264
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG-LTKLAYLYLSH 128
L+KL++ N+ N++T + D +L + + N++T + +++ L L L + +
Sbjct: 265 LLSKLKILNVSTNKLTSLP-DSICRCGSLVILDVSFNRLTYLPTNIGPELVNLEKLLVQY 323
Query: 129 NQLTEF--LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN--EI 184
N++ F + ++R LK L D +N++N + +TN+ L L N ++
Sbjct: 324 NKIRSFPTSIGEMRSLKHL---DAHFNELNGL------PDSFVLLTNLEYLNLSSNFSDL 374
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN-LLTTLEETSKTFLP 243
++L + + L LDLS+N++ + PD F LDSL L++ N L+ EE K +
Sbjct: 375 KDLPFSFGELISLQELDLSNNQIHAL-PDTFGTLDSLTKLNVDQNPLVVPPEEVVKEGVE 433
Query: 244 ALEELFVSHNSLTRLDKD 261
A++ ++ ++ L+++
Sbjct: 434 AVKT-YMGQRRISMLEEE 450
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 52/199 (26%), Positives = 86/199 (43%)
Query: 135 LLDDIRG-LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG 193
LL + G ++ L ++LS NK+ + + G+ ++ EL + N +E L ++
Sbjct: 212 LLPEAFGRIQGLLVLNLSNNKLESI------PDSIAGLHSLVELDVSTNSLETLPDSIGL 265
Query: 194 IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHN 253
+ L L++S NKL ++ PD SL +LD+S N LT L L LE+L V +N
Sbjct: 266 LSKLKILNVSTNKLTSL-PDSICRCGSLVILDVSFNRLTYLPTNIGPELVNLEKLLVQYN 324
Query: 254 SLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDD 313
+ + L D N + + L T + L+S L+ P
Sbjct: 325 KIRSFPTSIGEMRSLKHLDAHFNELNGLPDSFVLLTNLEYLNLSSNFSD-LKDLPF---- 379
Query: 314 SMRAVIDAMETINNNTKIH 332
S +I E +N +IH
Sbjct: 380 SFGELISLQELDLSNNQIH 398
>RGD|1598149 [details] [associations]
symbol:Vasn "vasorin" species:10116 "Rattus norvegicus"
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071461 "cellular response to redox state"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 SMART:SM00181 RGD:1598149
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104056
CTD:114990 OMA:VTQLRPN OrthoDB:EOG4GTKD4 EMBL:CH474017
IPI:IPI00204993 RefSeq:NP_001102852.1 UniGene:Rn.198255
Ensembl:ENSRNOT00000005490 GeneID:679921 KEGG:rno:679921
UCSC:RGD:1598149 NextBio:717547 Uniprot:D3ZAE6
Length = 673
Score = 207 (77.9 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 68/250 (27%), Positives = 122/250 (48%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD 65
L++ N + +L+ G LQLL + QNQ+ +LP I Q L +L N++ +
Sbjct: 58 LYIFENGITTLDVGCFAGFPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEIS 117
Query: 66 G-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
RGL +L+ + N+I ++ F L +L + L +N++ + L L +L L
Sbjct: 118 NETFRGLRRLERLYLGKNRIRHIQPGAFDALDHLLELKLPDNELRVL-PPLH-LPRLLLL 175
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
LSHN + L+ G+ L T ++ ++ G R + + N+ +L + N++
Sbjct: 176 DLSHNSIPA--LE--AGI--LDTANVEALRLAGLGLRQLDEGLFGRLRNLHDLDVSDNQL 229
Query: 185 ENLDGALMGIHGLSRLDLSHN-KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
++ + G+ GL+RL L+ N ++ I P+D GL +L+ LD+S+ L L + P
Sbjct: 230 GHMPSVIQGLRGLTRLRLAGNTRIAQIRPEDLAGLTALQELDVSNLSLQALPSDLSSLFP 289
Query: 244 ALEELFVSHN 253
L L + N
Sbjct: 290 RLRLLAAARN 299
Score = 156 (60.0 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 65/222 (29%), Positives = 100/222 (45%)
Query: 48 FSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 106
F L L + N+ITSL G + + L L ++ N++ + + F+ L L+ + L N
Sbjct: 76 FPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRLERLYLGKN 135
Query: 107 QITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 165
+I + + L L L L N+L +L + L RL +DLS+N I G
Sbjct: 136 RIRHIQPGAFDALDHLLELKLPDNELR--VLPPLH-LPRLLLLDLSHNSIPAL---EAG- 188
Query: 166 NQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
+ N+ L+L + LD L G + L LD+S N+L + P GL L L
Sbjct: 189 --ILDTANVEALRLAGLGLRQLDEGLFGRLRNLHDLDVSDNQLGHM-PSVIQGLRGLTRL 245
Query: 225 DISHNL-LTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGL 265
++ N + + L AL+EL VS+ SL L D L
Sbjct: 246 RLAGNTRIAQIRPEDLAGLTALQELDVSNLSLQALPSDLSSL 287
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 70/253 (27%), Positives = 114/253 (45%)
Query: 28 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITM 86
L LLV+ + +++ PS Q +Q +++ + T++ + L +F N IT
Sbjct: 12 LLLLVLLGSGVQSCPSGCQC-NQPQTVFCTARQGTTVPRDVPPDTVGLYIFE---NGITT 67
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
+ F L + L NQITS+ + L L+ L L+ N+L E + RGL+RL
Sbjct: 68 LDVGCFAGFPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRL 127
Query: 146 RTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+ L N+I R+ + ++ ELKL NE+ L + + L LDLSHN
Sbjct: 128 ERLYLGKNRI-----RHIQPGAFDALDHLLELKLPDNELRVLPP--LHLPRLLLLDLSHN 180
Query: 206 KLRTISPD--DFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFH 263
+ + D +++L++ + L L+E L L +L VS N L +
Sbjct: 181 SIPALEAGILDTANVEALRLAGLG---LRQLDEGLFGRLRNLHDLDVSDNQLGHMPSVIQ 237
Query: 264 GLPVLCKADLAHN 276
GL L + LA N
Sbjct: 238 GLRGLTRLRLAGN 250
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 46/156 (29%), Positives = 80/156 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL L L+L NR++ ++ G L L L + N+L LP + L +L L ++N
Sbjct: 123 GLRRLERLYLGKNRIRHIQPGAFDALDHLLELKLPDNELRVLPP-LHL-PRLLLLDLSHN 180
Query: 60 RITSLD-GLL--RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
I +L+ G+L + L++ + Q+ +NLH+LD + +NQ+ M S +
Sbjct: 181 SIPALEAGILDTANVEALRLAGLGLRQLDEGLFGRLRNLHDLD---VSDNQLGHMPSVIQ 237
Query: 117 GLTKLAYLYLSHN-QLTEFLLDDIRGLKRLRTVDLS 151
GL L L L+ N ++ + +D+ GL L+ +D+S
Sbjct: 238 GLRGLTRLRLAGNTRIAQIRPEDLAGLTALQELDVS 273
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 177 LKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I +L G + + LS LDL+ NKL IS + F GL L+ L + N + ++
Sbjct: 82 LDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRLERLYLGKNRIRHIQ 141
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+ L L EL + N L R+ H LP L DL+HN+I A+
Sbjct: 142 PGAFDALDHLLELKLPDNEL-RVLPPLH-LPRLLLLDLSHNSIPAL 185
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 209 (78.6 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 88/284 (30%), Positives = 128/284 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANN 58
GL L L L NN+L + + L L LQ L ++ N + +P + L L+ ++
Sbjct: 111 GLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDD 170
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 116
N +T + G L L LQ + N+I+ V FQNL +L + L NN+I + + S
Sbjct: 171 NALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFE 230
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L+HN+L EF + IR L RL+ + N I + N + + ++
Sbjct: 231 GLHSLETLDLNHNELQEFPVA-IRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYD 289
Query: 177 LKLQHNEIENLDGALMGIHGLSRLD-LSHNKLRTISP-DDFIGLDSLKMLDISHNLLTTL 234
N I+ + G H L RL LS N I D G SL++L ++ L L
Sbjct: 290 -----NPIQFV-GRSAFRH-LPRLHTLSLNGASDIQEFPDLKGTTSLEILTLTRAGLQRL 342
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNI 278
LP L+ L +SHN + L H L K L HN I
Sbjct: 343 PPGMCQQLPRLQVLELSHNQIQGLPS-LHRCQKLEKIGLQHNRI 385
Score = 193 (73.0 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 75/287 (26%), Positives = 135/287 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
L+ L L L+ N L + GQ L L++L+++ NQL +P++ + L SL + N
Sbjct: 88 LSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDAN 147
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 117
I+ + DG GL L+ +D N +T V +L L +++L N+I+ + + +
Sbjct: 148 LISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQN 207
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L+ L L+L +N++ GL L T+DL++N++ +F ++Q EL
Sbjct: 208 LSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQEFPVAIRTLGRLQ------EL 261
Query: 178 KLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
+N I+ + + A +G L + N ++ + F L L L + N + ++E
Sbjct: 262 GFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFRHLPRLHTLSL--NGASDIQE 319
Query: 237 -TSKTFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIKAI 281
+LE L ++ L RL LP L +L+HN I+ +
Sbjct: 320 FPDLKGTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQIQGL 366
Score = 180 (68.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 69/261 (26%), Positives = 118/261 (45%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNN 59
L L + L NR+ + + LS L +L + N+++ L + + L +L N+N
Sbjct: 184 LPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHN 243
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGL 118
+ +R L +LQ N I + F L +I +N I + S+ L
Sbjct: 244 ELQEFPVAIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFRHL 303
Query: 119 TKLAYLYLSH-NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+L L L+ + + EF D++G T L + + G + Q + + L
Sbjct: 304 PRLHTLSLNGASDIQEF--PDLKG-----TTSLEILTLTRAGLQRLPPGMCQQLPRLQVL 356
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
+L HN+I+ L +L L ++ L HN++ I D F L SL+ LD+S N + ++
Sbjct: 357 ELSHNQIQGLP-SLHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNAIRSIHPE 415
Query: 238 SKTFLPALEELFVSHNSLTRL 258
+ L AL +L ++HN LT L
Sbjct: 416 AFATLRALVKLDLTHNQLTML 436
Score = 178 (67.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 69/248 (27%), Positives = 114/248 (45%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P D+ + L NN +T L GL R L+ L+ + N ++ + F L+
Sbjct: 56 LSAVPGDLHPLTAYLDLSMNN--LTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLY 113
Query: 97 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
+L + LQNNQ+ + + +L L L L L N ++ GL LR + L N +
Sbjct: 114 SLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNAL 173
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD 214
+ + + + + L N I ++ D A + L L L +N+++ +
Sbjct: 174 TEVPV-----GALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHS 228
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEEL-FVSHNSLTRLDKDFHGLPVLCKADL 273
F GL SL+ LD++HN L +T L L+EL F ++N T +K F G P+L
Sbjct: 229 FEGLHSLETLDLNHNELQEFPVAIRT-LGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHF 287
Query: 274 AHNNIKAI 281
N I+ +
Sbjct: 288 YDNPIQFV 295
Score = 151 (58.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 66/255 (25%), Positives = 117/255 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL-GSLYANNN 59
GL L L LN+N L+ + TL +LQ L N ++ +P L + L +++ +N
Sbjct: 231 GLHSLETLDLNHNELQEFPVAIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDN 290
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITMVRR-DEFQNLHNLDSISLQNNQITSMNSSL-S 116
I + R L +L ++ N + ++ + + +L+ ++L + + +
Sbjct: 291 PIQFVGRSAFRHLPRLHTLSL--NGASDIQEFPDLKGTTSLEILTLTRAGLQRLPPGMCQ 348
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L +L L LSHNQ+ L + ++L + L +N+I + G + +T++
Sbjct: 349 QLPRLQVLELSHNQIQG--LPSLHRCQKLEKIGLQHNRIWEIGA-----DTFSQLTSLQA 401
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N I ++ A + L +LDL+HN+L T+ P GL L L + NL + +
Sbjct: 402 LDLSWNAIRSIHPEAFATLRALVKLDLTHNQL-TMLP--LAGLGGLVHLKLKGNLGLS-Q 457
Query: 236 ETSKTFLPALEELFV 250
SK P L L V
Sbjct: 458 AFSKDSFPKLRTLEV 472
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 57/226 (25%), Positives = 100/226 (44%)
Query: 94 NLHNLDS-ISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
+LH L + + L N +T + L L+ L L LS N L+ GL L+ + L
Sbjct: 62 DLHPLTAYLDLSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQ 121
Query: 152 YNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTI 210
N++ G E ++ + + L+L N I + DG+ G+ L L L N L +
Sbjct: 122 NNQLG--GIPAEALWELPSLQS---LRLDANLISLVPDGSFEGLPALRHLWLDDNALTEV 176
Query: 211 SPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLC 269
L +L+ + ++ N ++ + + + L +L L + +N + L F GL L
Sbjct: 177 PVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLE 236
Query: 270 KADLAHNNIKAINIQLALKTQCQIFGL-NSTLRIYLE----GNPVL 310
DL HN ++ + + + Q G N+ ++ E GNP+L
Sbjct: 237 TLDLNHNELQEFPVAIRTLGRLQELGFHNNNIQTIPEKAFLGNPLL 282
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 205 (77.2 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 71/229 (31%), Positives = 112/229 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL L WL+L++N + S+EG L +++ L + N++ LP++ + L S+ +
Sbjct: 87 GLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSY 146
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 116
N + SL+ L GL KL +M N I V FQ+ +L + + NQ+ S+ +S +
Sbjct: 147 NNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL KL L+L HN L + L L L ++ L NK+ N + + + +
Sbjct: 207 GLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIV------VNTLDWIWQLEK 260
Query: 177 LKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
L L NEIE ++ + + L L L N+L I D I LDS K L
Sbjct: 261 LDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYI--DSRI-LDSWKSL 306
Score = 179 (68.1 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 68/287 (23%), Positives = 131/287 (45%)
Query: 54 LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN- 112
LY + +T + L G+ L ++ +N ++ + +F L L + L +N I S+
Sbjct: 50 LYCESLNLTEMPRNLSGMMGL---SLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEG 106
Query: 113 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVT 172
++ L ++ L LS N++T+ + R + LR+VDLSYN + + G+
Sbjct: 107 NAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEP-----DLFHGLR 161
Query: 173 NIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ L ++ N I+ + + L LD+ +N+L++++ + F GL L L + HN L
Sbjct: 162 KLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKT-Q 290
+ L +L L + N +T + + L K DL+ N I+ I +
Sbjct: 222 VKVNLAHFPRLISLHSLCLRRNKVTIVVNTLDWIWQLEKLDLSGNEIEYIEPHVFESVPH 281
Query: 291 CQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETIC 337
+ L+S Y++ +L DS +++ +++ NT G +C
Sbjct: 282 LKSLQLDSNRLTYIDSR-IL--DSWKSLTSI--SLSANTWDCGRNVC 323
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 33/111 (29%), Positives = 57/111 (51%)
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
E +L + E NL + G+ L L +N L + F GL L L + HN + ++E
Sbjct: 46 EGRLLYCESLNLTEMPRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVE 105
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
+ L ++EL +S N +T+L + F +P L DL++NN++++ L
Sbjct: 106 GNAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDL 156
>UNIPROTKB|E1C0D6 [details] [associations]
symbol:E1C0D6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0001921 "positive regulation of receptor recycling"
evidence=IEA] [GO:0005913 "cell-cell adherens junction"
evidence=IEA] [GO:0008105 "asymmetric protein localization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0016080 "synaptic vesicle targeting" evidence=IEA] [GO:0016323
"basolateral plasma membrane" evidence=IEA] [GO:0016337 "cell-cell
adhesion" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0032863
"activation of Rac GTPase activity" evidence=IEA] [GO:0034750
"Scrib-APC-beta-catenin complex" evidence=IEA] [GO:0035089
"establishment of apical/basal cell polarity" evidence=IEA]
[GO:0035748 "myelin sheath abaxonal region" evidence=IEA]
[GO:0042060 "wound healing" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0045930 "negative regulation of mitotic
cell cycle" evidence=IEA] [GO:0048488 "synaptic vesicle
endocytosis" evidence=IEA] [GO:0050918 "positive chemotaxis"
evidence=IEA] [GO:0060561 "apoptotic process involved in
morphogenesis" evidence=IEA] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IEA] [GO:0071896 "protein localization to
adherens junction" evidence=IEA] Pfam:PF00595 Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 GO:GO:0031252 GO:GO:0016477
GO:GO:0008283 GO:GO:0045211 InterPro:IPR003591 SMART:SM00369
GO:GO:0016323 GO:GO:0042734 GO:GO:0005913 GO:GO:0043065
GO:GO:0016337 GO:GO:0042060 SUPFAM:SSF50156 GO:GO:0008105
GO:GO:0001921 InterPro:IPR025875 Pfam:PF12799 GO:GO:0050918
GO:GO:0034750 GO:GO:0032863 GO:GO:0045930 GO:GO:0035748
GO:GO:0071896 GO:GO:0035089 GeneTree:ENSGT00650000093182
OMA:GHRNSLE EMBL:AADN02016576 EMBL:AADN02016577 EMBL:AADN02016578
EMBL:AADN02016579 EMBL:AADN02016580 EMBL:AADN02016581
EMBL:AADN02016582 EMBL:AADN02016583 EMBL:AADN02016584
EMBL:AADN02016585 EMBL:AADN02016586 EMBL:AADN02016587
EMBL:AADN02016588 EMBL:AADN02016589 EMBL:AADN02016590
EMBL:AADN02016591 EMBL:AADN02016592 EMBL:AADN02016593
EMBL:AADN02016594 EMBL:AADN02016595 EMBL:AADN02016596
EMBL:AADN02016597 EMBL:AADN02016598 EMBL:AADN02016599
EMBL:AADN02016600 EMBL:AADN02016601 EMBL:AADN02016602
EMBL:AADN02016603 IPI:IPI00820029 ProteinModelPortal:E1C0D6
Ensembl:ENSGALT00000036525 Uniprot:E1C0D6
Length = 1526
Score = 211 (79.3 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 75/258 (29%), Positives = 123/258 (47%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L L L LN+ L+SL +G L+ L L + +N L+ LP+ + +L L N +
Sbjct: 128 LRSLGHLALNDVSLQSLPNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDL 187
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L L L L+ +D NQ++ + E NL L + + N++ + + +SGL L
Sbjct: 188 EVLPDTLGALPNLRELWLDRNQLSALP-PELGNLRRLVCLDVSENKLEQLPNEVSGLVAL 246
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L LS N L E + D I LK+L + + N++ + T + G + N+ EL L
Sbjct: 247 TDLLLSQN-LLECIPDGIGQLKQLSILKVDQNRLTEV-TESIGDCE-----NLSELILTE 299
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE-ETSKT 240
N + L +L + L+ L++ N+L ++ P + G +L +L + N L L E + T
Sbjct: 300 NMLTALPKSLGKLTKLTNLNVDRNRLTSL-PAEIGGCANLNVLSLRDNRLALLPAELANT 358
Query: 241 FLPALEELFVSHNSLTRL 258
L L V+ N L L
Sbjct: 359 --TELHVLDVAGNRLQNL 374
Score = 197 (74.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 60/206 (29%), Positives = 105/206 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L L + N +
Sbjct: 197 LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLLSQNLL 256
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+ DG+ + L +L + +D N++T V + + NL + L N +T++ SL LTK
Sbjct: 257 ECIPDGIGQ-LKQLSILKVDQNRLTEVT-ESIGDCENLSELILTENMLTALPKSLGKLTK 314
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L + N+LT L +I G L + L N++ ++ T + L +
Sbjct: 315 LTNLNVDRNRLTS-LPAEIGGCANLNVLSLRDNRLALLPA------ELANTTELHVLDVA 367
Query: 181 HNEIENLDGALMGIHGLSRLDLSHNK 206
N ++NL AL ++ L L L+ N+
Sbjct: 368 GNRLQNLPFALTNLN-LKALWLAENQ 392
Score = 192 (72.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 73/286 (25%), Positives = 128/286 (44%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L L+ N+L+ L L L+ L + N+++ LP ++ F QL L + N I +
Sbjct: 39 LEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEI 98
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
++ L++ + N ++ + + F L +L ++L + + S+ + + L L L
Sbjct: 99 PESIKFCKSLEIADFSGNPLSRLP-EGFTQLRSLGHLALNDVSLQSLPNDIGNLANLVTL 157
Query: 125 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
L N L + L + L +L +DL N + + + + N+ EL L N++
Sbjct: 158 ELREN-LLKTLPTSLSFLVKLEQLDLGGNDLEVL------PDTLGALPNLRELWLDRNQL 210
Query: 185 ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
L L + L LD+S NKL + P++ GL +L L +S NLL + + L
Sbjct: 211 SALPPELGNLRRLVCLDVSENKLEQL-PNEVSGLVALTDLLLSQNLLECIPDGIGQ-LKQ 268
Query: 245 LEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
L L V N LT + + L + L N + A+ L T+
Sbjct: 269 LSILKVDQNRLTEVTESIGDCENLSELILTENMLTALPKSLGKLTK 314
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/167 (29%), Positives = 85/167 (50%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL L L L+ N L+ + +G L +L +L ++QN+L + I L L N
Sbjct: 242 GLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLSELILTENM 301
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
+T+L L LTKL N+D N++T + E NL+ +SL++N++ + + L+ T+
Sbjct: 302 LTALPKSLGKLTKLTNLNVDRNRLTSLPA-EIGGCANLNVLSLRDNRLALLPAELANTTE 360
Query: 121 LAYLYLSHNQLTE--FLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 165
L L ++ N+L F L ++ LK L + + KF T ++ K
Sbjct: 361 LHVLDVAGNRLQNLPFALTNLN-LKALWLAENQSQPMLKFQTEDDEK 406
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
V + ++ +L+ + L NQ+ + L L L LS N++ L ++ +L
Sbjct: 28 VPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQR-LPPEVANFMQLV 86
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNK 206
+D+S N I + ++ ++ N + L + L L L+
Sbjct: 87 ELDISRNDIPEI------PESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLGHLALNDVS 140
Query: 207 LRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLP 266
L+++ P+D L +L L++ NLL TL TS +FL LE+L + N L L LP
Sbjct: 141 LQSL-PNDIGNLANLVTLELRENLLKTLP-TSLSFLVKLEQLDLGGNDLEVLPDTLGALP 198
Query: 267 VLCKADLAHNNIKAINIQL 285
L + L N + A+ +L
Sbjct: 199 NLRELWLDRNQLSALPPEL 217
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 206 (77.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 65/248 (26%), Positives = 122/248 (49%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 90
++ + L+ +P + ++ +L N ++ +D + L L++ + N I +
Sbjct: 61 VICTRRGLKDVPDGVSTNTRYLNLQDNQIQVIKVDSF-KHLRHLEILQLSRNHIRNIEIG 119
Query: 91 EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
F L +L+++ L +N++T++ N + L+KL L+L +N + D L LR +D
Sbjct: 120 AFNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLD 179
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRT 209
L ++ + + G QG++N+ L L ++ + + + L L++S N+L
Sbjct: 180 LG--ELKRLSYISSGA--FQGLSNLRYLNLGMCNLKEVPN-IQPLIRLDELEMSGNQLTV 234
Query: 210 ISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHG-LPVL 268
I P F GL L+ L + H + T+E S L +L EL ++HN+LT L D + L L
Sbjct: 235 IQPSSFKGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHL 294
Query: 269 CKADLAHN 276
+ L HN
Sbjct: 295 QRVHLHHN 302
Score = 171 (65.3 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 53/162 (32%), Positives = 83/162 (51%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GLT LN L L +NRL ++ G LSKL+ L + N +E++PSD FS+L SL
Sbjct: 123 GLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDA--FSRLPSLRRLDL 180
Query: 56 ANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R++ + G +GL+ L+ N+ + V Q L LD + + NQ+T + S
Sbjct: 181 GELKRLSYISSGAFQGLSNLRYLNLGMCNLKEV--PNIQPLIRLDELEMSGNQLTVIQPS 238
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GL L L++ H Q+ + L LR ++L++N +
Sbjct: 239 SFKGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNL 280
>MGI|MGI:1913856 [details] [associations]
symbol:Lrrc57 "leucine rich repeat containing 57"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1913856 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 HOGENOM:HOG000116557
HOVERGEN:HBG054710 OrthoDB:EOG4F1X40 EMBL:AK003037 EMBL:AK003592
IPI:IPI00623216 UniGene:Mm.428639 ProteinModelPortal:Q9D1G5
SMR:Q9D1G5 PhosphoSite:Q9D1G5 PaxDb:Q9D1G5 PRIDE:Q9D1G5
InParanoid:Q9D1G5 ChiTaRS:LRRC57 CleanEx:MM_LRRC57
Genevestigator:Q9D1G5 GermOnline:ENSMUSG00000027286 Uniprot:Q9D1G5
Length = 239
Score = 183 (69.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 64/217 (29%), Positives = 106/217 (48%)
Query: 17 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQ-LFSQLGSLYANNNRITSLDGLLRG-LTKL 74
+L + T K + ++ L PS++Q L S L ++ +NN+I SL L+ G T L
Sbjct: 5 ALRAHVETAQKTGVFQLKDRGLTEFPSELQKLTSNLRTIDLSNNKIDSLPPLIIGKFTLL 64
Query: 75 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 134
+ +++ N++T++ DE NL L+++SL NN + + S+ L+ L L LS NQL
Sbjct: 65 KSLSLNNNKLTVLP-DELCNLKKLETLSLNNNHLRELPSTFGQLSALKTLSLSGNQLGA- 122
Query: 135 LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGI 194
L + L+ L VDLS N+I + ++Q + EL L N+I L +
Sbjct: 123 LPPQLCCLRHLDVVDLSKNQIRSIP---DTVGELQAI----ELNLNQNQISQLSVKISCC 175
Query: 195 HGLSRLDLSHNKLR-TISPDDFIGLDSLKMLDISHNL 230
L L L N L ++ P + + +L + NL
Sbjct: 176 PRLKVLRLEENCLELSMLPQSILSDSQICLLAVEGNL 212
Score = 139 (54.0 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 43/129 (33%), Positives = 64/129 (49%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
T L L LNNN+L L +L L KL+ L + N L LPS S L +L + N++
Sbjct: 62 TLLKSLSLNNNKLTVLPDELCNLKKLETLSLNNNHLRELPSTFGQLSALKTLSLSGNQLG 121
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
+L L L L V ++ NQI + D L ++ ++L NQI+ ++ +S +L
Sbjct: 122 ALPPQLCCLRHLDVVDLSKNQIRSIP-DTVGELQAIE-LNLNQNQISQLSVKISCCPRLK 179
Query: 123 YLYLSHNQL 131
L L N L
Sbjct: 180 VLRLEENCL 188
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 51/208 (24%), Positives = 91/208 (43%)
Query: 109 TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQV 168
+++ + + K L LTEF + + LRT+DLS NKI+ GK
Sbjct: 4 SALRAHVETAQKTGVFQLKDRGLTEFPSELQKLTSNLRTIDLSNNKIDSLPPLIIGK--- 60
Query: 169 QGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
T + L L +N++ L L + L L L++N LR + P F L +LK L +S
Sbjct: 61 --FTLLKSLSLNNNKLTVLPDELCNLKKLETLSLNNNHLREL-PSTFGQLSALKTLSLSG 117
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALK 288
N L L L L+ + +S N + + L + + +L N I ++++++
Sbjct: 118 NQLGALPP-QLCCLRHLDVVDLSKNQIRSIPDTVGELQAI-ELNLNQNQISQLSVKISCC 175
Query: 289 TQCQIFGLNST-LRIYLEGNPVLCDDSM 315
+ ++ L L + + +L D +
Sbjct: 176 PRLKVLRLEENCLELSMLPQSILSDSQI 203
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 83/285 (29%), Positives = 136/285 (47%)
Query: 3 TDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNR 60
T++ L L +N+L+ L S+L +L N + L ++ Q L L +N
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 61 ITSLDG----LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS--MNSS 114
I+ L LT+L + + N I ++ D F+NL NL + L +N ++S + +
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMS---NSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQ 168
Query: 115 LSGLTKLAYLYLSHNQLTEFLLD--DIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQGV 171
L L L L LS+N+++ + D G L+ ++LS N+I +F ++ G+
Sbjct: 169 LQ-LENLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGL 227
Query: 172 TNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD--SLKMLDISHN 229
+ + KL + E L L + L LS N+L TIS F GL +L LD+S N
Sbjct: 228 S-LNNAKLSPSLTEKLCLELSNT-SIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRN 285
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADL 273
L + S +LP LE L + +N++ L + F+GL L + DL
Sbjct: 286 SLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDL 330
Score = 194 (73.4 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 84/298 (28%), Positives = 137/298 (45%)
Query: 3 TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPS-------DIQLFSQLGSL 54
T+L L L+ N L+ + L L+ L +E N +E L S +++ S
Sbjct: 275 TNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSF 334
Query: 55 YANNNRITSL----DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN--QI 108
+ +TSL D + L L+ NMD N ++R+ F L L +SL N+ +
Sbjct: 335 TRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSL 394
Query: 109 TSMNS----SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 164
++ + SL+G L L L+ N++++ L L +DL N+I + T E
Sbjct: 395 RTLTNETFLSLAGCP-LLLLNLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEW 453
Query: 165 KNQVQGVTNIFELKLQHNE-IENLDGALMGIHGLSRLDLSHNKLRTI--SPDDFIGLDSL 221
+ G+ NI E+ L +N+ +E + + L RL L L+ + SP F L +L
Sbjct: 454 R----GLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNL 509
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFH-GLPVLCKADLAHNNI 278
+LD+S+N + + + L LE L + HN+L RL K + G PV L H +I
Sbjct: 510 VILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHI 567
Score = 164 (62.8 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 54/165 (32%), Positives = 81/165 (49%)
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + L L+HNQL + +L +D +N I+K Q + + L
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPE-----LCQSLPWLEILN 106
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
LQHNEI L D + L+ L L N ++ I D F L +L LD+SHN L++ +
Sbjct: 107 LQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLG 166
Query: 238 SKTFLPALEELFVSHN---SLTRLDKDFHGLPVLCKADLAHNNIK 279
++ L L+EL +S+N SLT + DF G L + +L+ N IK
Sbjct: 167 TQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSNQIK 211
Score = 158 (60.7 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 89/326 (27%), Positives = 141/326 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ----LGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYA 56
L +L L L+NN++ SL + LG S L+ L + NQ+ E P +L L
Sbjct: 171 LENLQELLLSNNKISSLTPEEFDFLGN-SSLKRLELSSNQIKEFSPGCFHTLGELSGLSL 229
Query: 57 NNNRIT-SL-DGLLRGLTKLQVFNMDF--NQITMVRRDEFQNLH--NLDSISLQNNQITS 110
NN +++ SL + L L+ + N+ NQ+ + F L NL ++ L N +
Sbjct: 230 NNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRV 289
Query: 111 M-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
M N S + L L YL L +N + GL LR +DL F TR Q
Sbjct: 290 MGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLR----RSF-TR-----QSI 339
Query: 170 GVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
+T++ ++ D + + L L++ N I + F GL LK L +S++
Sbjct: 340 SLTSLPKID---------DFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNS 390
Query: 230 LLTTLEETSKTFLPA----LEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQ 284
+ T++TFL L L ++ N ++++ F L L DL N I +
Sbjct: 391 FSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQ---E 447
Query: 285 LALKTQCQIFGLNSTLRIYLEGNPVL 310
L T + GL++ + IYL N L
Sbjct: 448 L---TGQEWRGLDNIVEIYLSYNKYL 470
Score = 157 (60.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 84/346 (24%), Positives = 146/346 (42%)
Query: 1 GLTDLNWLFLNNN--RLKSLEGQLG-TLSKLQLLVIE--QNQLEALPSDIQLFSQLGSLY 55
GL L +L L+N+ L++L + +L+ LL++ +N++ + S FS LG L
Sbjct: 378 GLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGA--FSWLGHLE 435
Query: 56 ANN---NRI-TSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 110
+ N I L G RGL + + +N+ + + F ++ +L + L+ + +
Sbjct: 436 VLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKN 495
Query: 111 MNSSLSG---LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQ 167
++ S S L L L LS+N + + ++GL++L +DL +N + +
Sbjct: 496 VDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGP 555
Query: 168 VQGVTNIFEL---KLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKM 223
VQ + +F L L N + + A + L +DL N L + F SLK
Sbjct: 556 VQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKS 615
Query: 224 LDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCK-ADLAHNNIKAIN 282
L + NL+T++++T F PA L D + + H NI ++
Sbjct: 616 LSLQKNLITSVQKT--VFGPAFRNLSYLDMRFNPFDCTCESIAWFVNWINSTHTNISELS 673
Query: 283 IQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNN 328
T Q G L + +P C DS A + + IN N
Sbjct: 674 NHYLCNTPPQYHGYPVML---FDVSP--CKDS--APFELLFMININ 712
Score = 137 (53.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 41/131 (31%), Positives = 64/131 (48%)
Query: 172 TNIFELKLQHNEIENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
TNI L L HN++ L A + L+ LD N + + P+ L L++L++ HN
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 231 LTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
++ L + + F L EL + NS+ ++ D F L L K DL+HN + + L T
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTK----LGT 167
Query: 290 QCQIFGLNSTL 300
Q Q+ L L
Sbjct: 168 QLQLENLQELL 178
>UNIPROTKB|F1SQ08 [details] [associations]
symbol:KERA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0061303
GeneTree:ENSGT00600000084286 KO:K08123 OMA:RWINLNK EMBL:CU468030
RefSeq:XP_001927163.2 UniGene:Ssc.12936 ProteinModelPortal:F1SQ08
Ensembl:ENSSSCT00000001001 GeneID:100157843 KEGG:ssc:100157843
ArrayExpress:F1SQ08 Uniprot:F1SQ08
Length = 353
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 57/215 (26%), Positives = 106/215 (49%)
Query: 3 TDLNWLFLNNNRLKSL---EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L W+ LN N++ + +G L L KL L +E N+LE +PS + L L N
Sbjct: 95 TQLRWINLNKNKITNYGIEKGALSQLKKLLFLFLEDNELEEVPSPLP--RSLEQLQLARN 152
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
+++ + G L L + ++ N++ +RD F+ L NL +++ N + +M L
Sbjct: 153 KVSRIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLP 212
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
T L+L +N + + + ++ + L++NK++ G + G N V++I +
Sbjct: 213 ANTM--QLFLDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFN----VSSILD 266
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
L+L HN + + + H L L L HNK++ ++
Sbjct: 267 LQLSHNRLTKVPR--ISAH-LQHLHLDHNKIKNVN 298
Score = 177 (67.4 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 66/265 (24%), Positives = 125/265 (47%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITM--V 87
L E L+ +P+ + S++ LY NN I ++ + T+L+ N++ N+IT +
Sbjct: 56 LYCENRGLKEIPA---IPSRIWYLYLENNLIETIPEKPFENATQLRWINLNKNKITNYGI 112
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
+ L L + L++N++ + S L L L L+ N+++ L+ L
Sbjct: 113 EKGALSQLKKLLFLFLEDNELEEVPSPLP--RSLEQLQLARNKVSRIPQGTFSNLENLTL 170
Query: 148 VDLSYNKI--NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+DL +NK+ N F ++ +G+ N+ +L + N + N+ L +L L +N
Sbjct: 171 LDLQHNKLLDNAFQ-----RDTFKGLKNLMQLNMAKNALRNMPPRLPA--NTMQLFLDNN 223
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF-LPALEELFVSHNSLTRLDKDFHG 264
+ I + F + + L ++HN L+ S F + ++ +L +SHN LT++ +
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFNVSSILDLQLSHNRLTKVPRISAH 283
Query: 265 LPVLCKADLAHNNIKAINIQLALKT 289
L L L HN IK +N+ + T
Sbjct: 284 LQHL---HLDHNKIKNVNVSVICPT 305
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 69/261 (26%), Positives = 116/261 (44%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD- 65
L+ N LK + S++ L +E N +E +P + +QL + N N+IT+
Sbjct: 56 LYCENRGLKEIPA---IPSRIWYLYLENNLIETIPEKPFENATQLRWINLNKNKITNYGI 112
Query: 66 --GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLA 122
G L L KL ++ N++ V ++L L L N+++ + + S L L
Sbjct: 113 EKGALSQLKKLLFLFLEDNELEEVPSPLPRSLEQLQ---LARNKVSRIPQGTFSNLENLT 169
Query: 123 YLYLSHNQLTE--FLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L HN+L + F D +GLK L ++++ N + R N +L L
Sbjct: 170 LLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA--------NTMQLFLD 221
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTIS-PDDFIGLDSLKMLDISHNLLTTLEETS 238
+N IE + + I ++ L L+HNKL P + S+ L +SHN LT + S
Sbjct: 222 NNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFNVSSILDLQLSHNRLTKVPRIS 281
Query: 239 KTFLPALEELFVSHNSLTRLD 259
L+ L + HN + ++
Sbjct: 282 AH----LQHLHLDHNKIKNVN 298
Score = 151 (58.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 60/239 (25%), Positives = 111/239 (46%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
+LY N + + + + L + N N I + F+N L I+L N+IT+
Sbjct: 55 ALYCENRGLKEIPAIPSRIWYLYLEN---NLIETIPEKPFENATQLRWINLNKNKITNYG 111
Query: 113 ---SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
+LS L KL +L+L N+L E R L++L+ L+ NK+++ +
Sbjct: 112 IEKGALSQLKKLLFLFLEDNELEEVPSPLPRSLEQLQ---LARNKVSRIP-----QGTFS 163
Query: 170 GVTNIFELKLQHNEIENLDGALM-----GIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
+ N+ L LQHN++ LD A G+ L +L+++ N LR + P + +++++
Sbjct: 164 NLENLTLLDLQHNKL--LDNAFQRDTFKGLKNLMQLNMAKNALRNMPPR--LPANTMQLF 219
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADL--AHNNIKAI 281
+ +N + + E +P + L ++HN L+ G V DL +HN + +
Sbjct: 220 -LDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFNVSSILDLQLSHNRLTKV 277
>UNIPROTKB|A6QPQ1 [details] [associations]
symbol:NEPN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030512 "negative regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005614 "interstitial
matrix" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
GO:GO:0030198 GO:GO:0000122 InterPro:IPR000372 SMART:SM00013
GO:GO:0030512 GO:GO:0005614 GeneTree:ENSGT00700000104286
EMBL:DAAA02025759 EMBL:DAAA02025760 EMBL:DAAA02025761 EMBL:BC149425
IPI:IPI00867027 IPI:IPI01028059 RefSeq:NP_001096797.1
UniGene:Bt.98028 STRING:A6QPQ1 Ensembl:ENSBTAT00000055571
GeneID:100125284 KEGG:bta:100125284 CTD:66650 eggNOG:NOG261221
HOGENOM:HOG000152307 HOVERGEN:HBG075864 InParanoid:A6QPQ1
OMA:RRLYISH OrthoDB:EOG49KFQM NextBio:20788795 Uniprot:A6QPQ1
Length = 512
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 89/355 (25%), Positives = 160/355 (45%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L L LN+N + L G L KL++L ++ N + ++ + + L SL + N I
Sbjct: 118 LEVLKLNDNSIYVLHGSDFEGLKKLKILELKNNLISSISTSMLSSLVSLQSLMLDANNIE 177
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
+++G L L L+ +M+ N++ ++ F +L +L +S +N +T + +L L
Sbjct: 178 NVEGPL-ALPHLKHLSMENNKLHLIPASFFTSLQSLQFLSFSSNFLTKIPINLP--KSLL 234
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L + N+L D++ L+ L + LS N ++ EG Q + N+ L++ N
Sbjct: 235 SLKMERNRLKAVRFRDMKHLENLSHLYLSENSLSSI----EG---AQLLANLTTLEVSQN 287
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+++ L L L +LD+S+N +R ++ DF L LK L + +N+++ E +
Sbjct: 288 QLQTLPLRLPA--RLQKLDISNNLIRKVTAQDFRDLRDLKHLFLDNNIVSLFEAGALQKC 345
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKT--QCQIFGLNST- 299
L L + N L + G L + DL N I+ I + +K Q Q+ L +
Sbjct: 346 SQLSNLALEQNLLLSIPLRLPG--TLARLDLKGNAIQDI-AEREVKDLKQLQVLNLRNNR 402
Query: 300 --------------LR-IYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
LR +YL+GNP C S+ + ++ T + G P
Sbjct: 403 LSALDLKALEVLPRLRHLYLDGNPWNCTCSLLRAREVLKA--KGTDVRGGQCVAP 455
Score = 173 (66.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 70/250 (28%), Positives = 113/250 (45%)
Query: 37 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK---LQVFNMDFNQITMVRRDEFQ 93
+L +PS I S LY ++++I L L T+ L+ F + + V D F+
Sbjct: 37 RLTEVPSGIP--STTKKLYISHSKIQHLQ--LSNFTQMLALEDFLLLASGTESVENDTFK 92
Query: 94 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 153
L L ++ L N++ + +L L L L+ N + D GLK+L+ ++L N
Sbjct: 93 TLSTLKTLELWKNKLRRVPRALPA--SLEVLKLNDNSIYVLHGSDFEGLKKLKILELKNN 150
Query: 154 KINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPD 213
I+ T + + + ++ L L N IEN++G L H L L + +NKL I
Sbjct: 151 LISSIST-----SMLSSLVSLQSLMLDANNIENVEGPLALPH-LKHLSMENNKLHLIPAS 204
Query: 214 DFIGLDSLKMLDISHNLLTTLEETSKTFLP-ALEELFVSHNSLTRLD-KDFHGLPVLCKA 271
F L SL+ L S N LT + LP +L L + N L + +D L L
Sbjct: 205 FFTSLQSLQFLSFSSNFLTKIPIN----LPKSLLSLKMERNRLKAVRFRDMKHLENLSHL 260
Query: 272 DLAHNNIKAI 281
L+ N++ +I
Sbjct: 261 YLSENSLSSI 270
Score = 172 (65.6 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 72/276 (26%), Positives = 133/276 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NN 58
L L L L+ N ++++EG L L L+ L +E N+L +P+ F+ L SL ++
Sbjct: 163 LVSLQSLMLDANNIENVEGPLA-LPHLKHLSMENNKLHLIPASF--FTSLQSLQFLSFSS 219
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS--L 115
N +T + L + L L+ M+ N++ VR + ++L NL + L N ++S+ + L
Sbjct: 220 NFLTKIPINLPKSLLSLK---MERNRLKAVRFRDMKHLENLSHLYLSENSLSSIEGAQLL 276
Query: 116 SGLT------------------KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 157
+ LT +L L +S+N + + D R L+ L+ + L N ++
Sbjct: 277 ANLTTLEVSQNQLQTLPLRLPARLQKLDISNNLIRKVTAQDFRDLRDLKHLFLDNNIVSL 336
Query: 158 FGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG 217
F +Q + + L L+ N + ++ L G L+RLDL N ++ I+ +
Sbjct: 337 FEA-----GALQKCSQLSNLALEQNLLLSIPLRLPGT--LARLDLKGNAIQDIAEREVKD 389
Query: 218 LDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHN 253
L L++L++ +N L+ L+ + LP L L++ N
Sbjct: 390 LKQLQVLNLRNNRLSALDLKALEVLPRLRHLYLDGN 425
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 78/277 (28%), Positives = 130/277 (46%)
Query: 24 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFN 82
TLS L+ L + +N+L +P + + L L N+N I L G GL KL++ + N
Sbjct: 93 TLSTLKTLELWKNKLRRVPRALP--ASLEVLKLNDNSIYVLHGSDFEGLKKLKILELKNN 150
Query: 83 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 142
I+ + +L +L S+ L N I ++ L+ L L +L + +N+L L
Sbjct: 151 LISSISTSMLSSLVSLQSLMLDANNIENVEGPLA-LPHLKHLSMENNKLHLIPASFFTSL 209
Query: 143 KRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLD 201
+ L+ + S N + K N K+ + LK++ N ++ + M + LS L
Sbjct: 210 QSLQFLSFSSNFLTKIPI-NLPKS-------LLSLKMERNRLKAVRFRDMKHLENLSHLY 261
Query: 202 LSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA-LEELFVSHNSLTRLD- 259
LS N L +I + +L L++S N L TL LPA L++L +S+N + ++
Sbjct: 262 LSENSLSSIEGAQLLA--NLTTLEVSQNQLQTLPLR----LPARLQKLDISNNLIRKVTA 315
Query: 260 KDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGL 296
+DF L L K NNI ++ AL+ Q+ L
Sbjct: 316 QDFRDLRDL-KHLFLDNNIVSLFEAGALQKCSQLSNL 351
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 42/180 (23%), Positives = 87/180 (48%)
Query: 102 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
S+Q ++T + S + TK LY+SH+++ L + + L L + GT
Sbjct: 32 SVQCYRLTEVPSGIPSTTKK--LYISHSKIQHLQLSNFTQMLALEDFLLLAS-----GTE 84
Query: 162 NEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSL 221
+ + + ++ + L+L N++ + AL L L L+ N + + DF GL L
Sbjct: 85 SVENDTFKTLSTLKTLELWKNKLRRVPRALPA--SLEVLKLNDNSIYVLHGSDFEGLKKL 142
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
K+L++ +NL++++ + + L +L+ L + N++ ++ LP L + +N + I
Sbjct: 143 KILELKNNLISSISTSMLSSLVSLQSLMLDANNIENVEGPL-ALPHLKHLSMENNKLHLI 201
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 154 (59.3 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 52/156 (33%), Positives = 76/156 (48%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSL-DG 66
L N +KS+ G KL+ + + NQ+ E P Q L SL N+IT L G
Sbjct: 178 LELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQG 237
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLY 125
+ GL LQ+ ++ N+I +R D FQ+L NL +SL +N+I S+ + + L + L+
Sbjct: 238 VFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLH 297
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
L+ N F+ D LK L L N I G R
Sbjct: 298 LAQNP---FICDC--NLKWLADF-LRSNPIETSGAR 327
Score = 143 (55.4 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 84/329 (25%), Positives = 141/329 (42%)
Query: 28 LQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQIT 85
L+ L +++NQ+ + + L L NNN IT++ + KL+ F + N +
Sbjct: 21 LKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL- 79
Query: 86 MVRRDEFQNLHNLDSIS--LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 143
F + H L +S L+ + + SG L L ++ Q +EF
Sbjct: 80 ------FCDCH-LAWLSQWLRQRPTIGLFTQCSGPAGLRGLNVAEVQKSEFSCSGQGEAG 132
Query: 144 RLRTVDLSYNKINKFGTRNEG--KNQVQGVTNI--------FELKLQHNEIENLD-GALM 192
R + LS + G + +G+T I E++L+ N I+++ GA
Sbjct: 133 RTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPEAMTEIRLELNGIKSIPPGAFS 192
Query: 193 GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSH 252
L R+DLS+N++ I+PD F GL SL L + N +T L + L L+ L ++
Sbjct: 193 PYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNA 252
Query: 253 NSLT--RLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVL 310
N + RLD F L L L N I++ LA T L + ++L NP +
Sbjct: 253 NKINCIRLDA-FQDLQNLSLLSLYDNKIQS----LAKGT---FTSLRAIQTLHLAQNPFI 304
Query: 311 CDDSMRAVIDAMETINNNTKIHGETICQP 339
CD +++ + D + + N + G P
Sbjct: 305 CDCNLKWLADFLRS--NPIETSGARCASP 331
Score = 129 (50.5 bits), Expect = 6.1e-09, Sum P(4) = 6.1e-09
Identities = 36/129 (27%), Positives = 69/129 (53%)
Query: 122 AYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
A L L++N+++ + + L L+ ++LS NK+++ +G +G ++ EL L
Sbjct: 405 AELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEI---EDGA--FEGAASVSELHLT 459
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N++E++ G G+ GL L L +N++ I D F GL ++++L + N + T+ +
Sbjct: 460 ANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAF 519
Query: 240 TFLPALEEL 248
L AL L
Sbjct: 520 DTLQALSTL 528
Score = 123 (48.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 33/130 (25%), Positives = 63/130 (48%)
Query: 31 LVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMV 87
L + N++ L + + + L + +NN+++ + DG G + ++ NQ+ +
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 466
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
R F+ L L ++ L+NN+I+ + N S +GL + L L NQ+ L+ L
Sbjct: 467 RSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALS 526
Query: 147 TVDLSYNKIN 156
T++L N N
Sbjct: 527 TLNLLANPFN 536
Score = 119 (46.9 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 35/127 (27%), Positives = 64/127 (50%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN + LE G L+ L+ + + N++ + + + + L+ N++ S+
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 466
Query: 65 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
G+ RGL L+ + N+I+ + D F L N+ +SL +NQI +++ + L L+
Sbjct: 467 RSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALS 526
Query: 123 YLYLSHN 129
L L N
Sbjct: 527 TLNLLAN 533
Score = 118 (46.6 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 38/127 (29%), Positives = 66/127 (51%)
Query: 82 NQITMVRRDE-FQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDI 139
N+I+++ F+ L +L I+L NN+++ + + + G ++ L+L+ NQL
Sbjct: 412 NEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMF 471
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLS 198
RGL+ LRT+ L N+I+ N+ G+ N+ L L N+I + GA + LS
Sbjct: 472 RGLEGLRTLMLRNNRISCI--HNDS---FTGLRNVRLLSLYDNQIATISPGAFDTLQALS 526
Query: 199 RLDLSHN 205
L+L N
Sbjct: 527 TLNLLAN 533
Score = 109 (43.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
T +L N N+ E + +T++ ++ L +N++ + DGA G +S L L+ N
Sbjct: 404 TAELRLNN-NEISIL-EATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTAN 461
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L +I F GL+ L+ L + +N ++ + S T L + L + N + + F
Sbjct: 462 QLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDT 521
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N QLA
Sbjct: 522 LQALSTLNLLANPFNC-NCQLA 542
Score = 98 (39.6 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
LT L + L+NN++ +E G + + L + NQLE++ S + + L +L NN
Sbjct: 426 LTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNN 485
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
RI+ + + GL +++ ++ NQI + F L L +++L N + N L+ L
Sbjct: 486 RISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPF-NCNCQLAWL 544
Score = 94 (38.1 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N+I +L + + + L+ L LS+N L+ I P F GL SL++L + N ++TL+E
Sbjct: 653 LSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEG 712
Query: 238 SKTFLPALEELFVSHNSL 255
+ +L L + N L
Sbjct: 713 IFADVTSLSHLAIGANPL 730
Score = 90 (36.7 bits), Expect = 6.1e-09, Sum P(4) = 6.1e-09
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLS 127
RG T L+ +D NQI + F+ L L+ ++L NN IT++ SS + + KL L
Sbjct: 16 RGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLH 75
Query: 128 HNQL 131
N L
Sbjct: 76 SNHL 79
Score = 85 (35.0 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
N+ EL L N+ + L L +DLS+NK+ ++S F + L L +S+N L
Sbjct: 624 NVTELYLDGNQFTLVPAQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQ 683
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK 260
+ + L +L L + N ++ L +
Sbjct: 684 CIPPLAFQGLRSLRLLSLHGNDISTLQE 711
Score = 71 (30.1 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 140
N I + R F+ +L ++ L NQI + + L L L L++N +T +
Sbjct: 5 NTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN 64
Query: 141 GLKRLRTVDLSYNKI 155
+ +LRT L N +
Sbjct: 65 HMPKLRTFRLHSNHL 79
Score = 61 (26.5 bits), Expect = 4.0e-06, Sum P(4) = 4.0e-06
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANN 58
G TDL L L+ N++ +E G L L++L + N + +P S +L + ++
Sbjct: 17 GATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHS 76
Query: 59 NRI 61
N +
Sbjct: 77 NHL 79
Score = 41 (19.5 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHG 333
+ LNS +Y+ G PV D A + +N T HG
Sbjct: 1139 YTLNSDAPLYVGGMPV---DVNSAAFRLWQILNG-TSFHG 1174
Score = 39 (18.8 bits), Expect = 6.1e-09, Sum P(4) = 6.1e-09
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAIN 282
EL++ N T + L DL++N I +++
Sbjct: 627 ELYLDGNQFTLVPAQLSTFKYLQLVDLSNNKISSLS 662
>UNIPROTKB|Q15435 [details] [associations]
symbol:PPP1R7 "Protein phosphatase 1 regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030234 "enzyme
regulator activity" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0008599 "protein phosphatase type 1 regulator
activity" evidence=TAS] [GO:0050790 "regulation of catalytic
activity" evidence=NAS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005634 GO:GO:0005737 EMBL:CH471063 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GO:GO:0008599 CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161
OMA:PQYRRKI OrthoDB:EOG4894MX EMBL:Z50749 EMBL:AF067136
EMBL:AF067130 EMBL:AF067132 EMBL:AF067133 EMBL:AF067134
EMBL:AF067135 EMBL:AF067131 EMBL:BT007296 EMBL:BT020134
EMBL:AK294043 EMBL:BC000910 EMBL:BC012397 EMBL:BC013001
IPI:IPI00033600 IPI:IPI00395771 IPI:IPI00759705 IPI:IPI00759816
PIR:S68209 RefSeq:NP_002703.1 UniGene:Hs.36587
ProteinModelPortal:Q15435 SMR:Q15435 DIP:DIP-1005N IntAct:Q15435
STRING:Q15435 PhosphoSite:Q15435 DMDM:74762145
REPRODUCTION-2DPAGE:IPI00033600 PaxDb:Q15435 PRIDE:Q15435
DNASU:5510 Ensembl:ENST00000234038 Ensembl:ENST00000272983
Ensembl:ENST00000401987 Ensembl:ENST00000406106
Ensembl:ENST00000407025 GeneID:5510 KEGG:hsa:5510 UCSC:uc002was.3
UCSC:uc002wat.1 UCSC:uc002wau.1 GeneCards:GC02P242088
HGNC:HGNC:9295 HPA:HPA034501 MIM:602877 neXtProt:NX_Q15435
PharmGKB:PA33658 InParanoid:Q15435 PhylomeDB:Q15435 ChiTaRS:PPP1R7
GenomeRNAi:5510 NextBio:21312 ArrayExpress:Q15435 Bgee:Q15435
CleanEx:HS_PPP1R7 Genevestigator:Q15435 GermOnline:ENSG00000115685
Uniprot:Q15435
Length = 360
Score = 200 (75.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 67/257 (26%), Positives = 136/257 (52%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L + L L N +K +E L L L+ L + NQ++ + +++ ++L L + N +
Sbjct: 97 LKKVKTLCLRQNLIKCIEN-LEELQSLRELDLYDNQIKKI-ENLEALTELEILDISFNLL 154
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
+++G+ + LT+L+ + N+I+ + + NLH L + L +N+I ++ + + LT L
Sbjct: 155 RNIEGVDK-LTRLKKLFLVNNKISKI--ENLSNLHQLQMLELGSNRIRAIEN-IDTLTNL 210
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L+L N++T+ L ++ L L + + N++ K EG +Q + N+ EL L H
Sbjct: 211 ESLFLGKNKITK--LQNLDALTNLTVLSMQSNRLTKI----EG---LQNLVNLRELYLSH 261
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N IE ++G L + L+ LD++ N+++ I ++ L L+ ++ NLL + + +
Sbjct: 262 NGIEVIEG-LENNNKLTMLDIASNRIKKI--ENISHLTELQEFWMNDNLLESWSDLDELK 318
Query: 242 -LPALEELFVSHNSLTR 257
+LE +++ N L +
Sbjct: 319 GARSLETVYLERNPLQK 335
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 84/301 (27%), Positives = 131/301 (43%)
Query: 34 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR-DEF 92
E+++L I L + N+ RI ++G L K++ + N I + +E
Sbjct: 61 EEHELPVDMETINLDRDAEDVDLNHYRIGKIEGF-EVLKKVKTLCLRQNLIKCIENLEEL 119
Query: 93 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 152
Q+L LD L +NQI + + L LT+L L +S N L ++ + L RL+ + L
Sbjct: 120 QSLRELD---LYDNQIKKIEN-LEALTELEILDISFNLLRN--IEGVDKLTRLKKLFLVN 173
Query: 153 NKINKFGTRNEGKNQVQGVTNIFELKLQH-NEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
NKI+K + +Q+Q + EL IEN+D + L L L NK+ +
Sbjct: 174 NKISKIENLSN-LHQLQ----MLELGSNRIRAIENIDT----LTNLESLFLGKNKITKLQ 224
Query: 212 PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKA 271
D L +L +L + N LT +E L L EL++SHN + ++ L
Sbjct: 225 NLD--ALTNLTVLSMQSNRLTKIEGLQN--LVNLRELYLSHNGIEVIE-GLENNNKLTML 279
Query: 272 DLAHNNIKAI-NIQLALKTQ---------------CQIFGLNSTLRIYLEGNPVLCDDSM 315
D+A N IK I NI + Q ++ G S +YLE NP+ D
Sbjct: 280 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 339
Query: 316 R 316
R
Sbjct: 340 R 340
>MGI|MGI:109347 [details] [associations]
symbol:Lum "lumican" species:10090 "Mus musculus" [GO:0005518
"collagen binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO;IDA] [GO:0005583 "fibrillar collagen" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] InterPro:IPR001611 InterPro:IPR027219
PROSITE:PS51450 MGI:MGI:109347 GO:GO:0005615 GO:GO:0005578
GO:GO:0045944 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0014070 GO:GO:0051216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0070848 GO:GO:0005583
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:S79461 EMBL:AF013262 EMBL:AK014312
EMBL:AK075737 EMBL:AK164774 EMBL:BC005550 IPI:IPI00313900
RefSeq:NP_032550.2 UniGene:Mm.18888 ProteinModelPortal:P51885
SMR:P51885 STRING:P51885 PhosphoSite:P51885 PaxDb:P51885
PRIDE:P51885 Ensembl:ENSMUST00000038160 GeneID:17022 KEGG:mmu:17022
UCSC:uc007gwz.2 InParanoid:P51885 NextBio:291134 Bgee:P51885
CleanEx:MM_LUM Genevestigator:P51885 GermOnline:ENSMUSG00000036446
Uniprot:P51885
Length = 338
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 73/268 (27%), Positives = 133/268 (49%)
Query: 28 LQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRI--TSLDG-LLRGLTKLQVFNMDFNQ 83
++ L + NQ++ + + + L L ++N + + + G + L +L+ ++++N
Sbjct: 68 IKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGKVFSKLKQLKKLHINYNN 127
Query: 84 ITMVRRDEFQNL-HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD-DIRG 141
+T + L +L + L NN+I+ + S GL L ++YL HNQL E + ++G
Sbjct: 128 LT----ESVGPLPKSLQDLQLTNNKISKLGS-FDGLVNLTFIYLQHNQLKEDAVSASLKG 182
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGV-TNIFELKLQHNEIENL-DGALMGIHGLSR 199
LK L +DLS+N+++K G+ T++ L L +N+I N+ D GL
Sbjct: 183 LKSLEYLDLSFNQMSKLPA---------GLPTSLLTLYLDNNKISNIPDEYFKRFTGLQY 233
Query: 200 LDLSHNKLRTIS-PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
L LSHN+L P + + SL LD+S+N L ++ ++ LE ++ N L +
Sbjct: 234 LRLSHNELADSGVPGNSFNISSLLELDLSYNKLKSIPTVNEN----LENYYLEVNELEKF 289
Query: 259 D-KDFHGLPVLCK--ADLAHNNIKAINI 283
D K F CK L+++ IK + +
Sbjct: 290 DVKSF------CKILGPLSYSKIKHLRL 311
Score = 158 (60.7 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 60/242 (24%), Positives = 114/242 (47%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 58
+TDL WL L++N L++ ++G++ L +L+ L I N L + L L N
Sbjct: 89 VTDLQWLILDHNLLENSKIKGKVFSKLKQLKKLHINYNNLTESVGPLP--KSLQDLQLTN 146
Query: 59 NRITSLDGLLRGLTKLQVFNMDFNQITM-VRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
N+I+ L G GL L + NQ+ + L +L+ + L NQ++ + + L
Sbjct: 147 NKISKL-GSFDGLVNLTFIYLQHNQLKEDAVSASLKGLKSLEYLDLSFNQMSKLPAGLP- 204
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
T L LYL +N+++ + + L+ + LS+N++ G N ++++ EL
Sbjct: 205 -TSLLTLYLDNNKISNIPDEYFKRFTGLQYLRLSHNELADSGVPGNSFN----ISSLLEL 259
Query: 178 KLQHNEI-------ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L +N++ ENL+ + ++ L + D+ + + + P + +K L + N
Sbjct: 260 DLSYNKLKSIPTVNENLENYYLEVNELEKFDVK-SFCKILGP---LSYSKIKHLRLDGNP 315
Query: 231 LT 232
LT
Sbjct: 316 LT 317
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/189 (26%), Positives = 94/189 (49%)
Query: 1 GLTDLNWLFLNNNRLK--SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 58
GL +L +++L +N+LK ++ L L L+ L + NQ+ LP+ + + L +LY +N
Sbjct: 157 GLVNLTFIYLQHNQLKEDAVSASLKGLKSLEYLDLSFNQMSKLPAGLP--TSLLTLYLDN 214
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N+I+++ D + T LQ + N++ + V + F N+ +L + L N++ S+ +
Sbjct: 215 NKISNIPDEYFKRFTGLQYLRLSHNELADSGVPGNSF-NISSLLELDLSYNKLKSIPTVN 273
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L Y YL N+L +F D++ ++ LSY+KI Q +++
Sbjct: 274 ENLEN--Y-YLEVNELEKF---DVKSFCKILG-PLSYSKIKHLRLDGNPLTQSSLPPDMY 326
Query: 176 ELKLQHNEI 184
E NEI
Sbjct: 327 ECLRVANEI 335
>WB|WBGene00002632 [details] [associations]
symbol:let-413 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0060465
"pharynx development" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IMP] [GO:0030728 "ovulation" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0007043 "cell-cell junction
assembly" evidence=IMP] [GO:0030029 "actin filament-based process"
evidence=IMP] [GO:0016323 "basolateral plasma membrane"
evidence=IDA] Pfam:PF00595 InterPro:IPR001611 InterPro:IPR001478
PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228 GO:GO:0009792
GO:GO:0030728 GO:GO:0007163 GO:GO:0015031 eggNOG:COG4886
GO:GO:0040011 GO:GO:0007155 GO:GO:0016323 GO:GO:0005912
GO:GO:0040035 GO:GO:0040015 SUPFAM:SSF50156 GO:GO:0007043
GO:GO:0060465 GO:GO:0030029 EMBL:AJ276590 EMBL:FO081227 PIR:T33295
RefSeq:NP_001023850.1 RefSeq:NP_001023851.1 UniGene:Cel.6189
ProteinModelPortal:O61967 SMR:O61967 DIP:DIP-25349N IntAct:O61967
MINT:MINT-1058604 STRING:O61967 PaxDb:O61967 PRIDE:O61967
EnsemblMetazoa:F26D11.11b GeneID:179171 KEGG:cel:CELE_F26D11.11
UCSC:F26D11.11a CTD:179171 WormBase:F26D11.11a WormBase:F26D11.11b
GeneTree:ENSGT00650000093182 HOGENOM:HOG000116557 InParanoid:O61967
OMA:FERHNTP NextBio:904226 GO:GO:0045108 Uniprot:O61967
Length = 699
Score = 206 (77.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 75/275 (27%), Positives = 128/275 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L DLN L +NN +K L+ +L +L L++L + N+L LP++I +QL L N N I
Sbjct: 38 LEDLN-LTMNN--IKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSI 94
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L ++ L N+ N T + + ++ +SL +T + S++ LT L
Sbjct: 95 AKLPDTMQNCKLLTTLNLSSNPFTRLP-ETICECSSITILSLNETSLTLLPSNIGSLTNL 153
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L N L L + L++L +DL N++ GK +T++ E +
Sbjct: 154 RVLEARDNLLRTIPLSIVE-LRKLEELDLGQNELEALPAEI-GK-----LTSLREFYVDI 206
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N + +L ++ G L +LD+S N++ + P++ + +L L+IS N + L +S
Sbjct: 207 NSLTSLPDSISGCRMLDQLDVSENQIIRL-PENLGRMPNLTDLNISINEIIELP-SSFGE 264
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
L L+ L NSL L + L + L N
Sbjct: 265 LKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQN 299
Score = 192 (72.6 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 66/244 (27%), Positives = 116/244 (47%)
Query: 35 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 94
Q+ L+A+PSDI F +L L N I LD L L L++ ++ N++ ++ E N
Sbjct: 22 QSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPA-EIGN 80
Query: 95 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L L ++L N I + ++ L L LS N T L + I + + L+
Sbjct: 81 LTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTR-LPETICECSSITILSLNETS 139
Query: 155 INKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDD 214
+ + N G +TN+ L+ + N + + +++ + L LDL N+L + P +
Sbjct: 140 LTLLPS-NIGS-----LTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEAL-PAE 192
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLA 274
L SL+ + N LT+L + S + L++L VS N + RL ++ +P L +++
Sbjct: 193 IGKLTSLREFYVDINSLTSLPD-SISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNIS 251
Query: 275 HNNI 278
N I
Sbjct: 252 INEI 255
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 66/252 (26%), Positives = 115/252 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT+L L +N L+++ + L KL+ L + QN+LEALP++I + L Y + N +
Sbjct: 150 LTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSL 209
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
TSL + G L ++ NQI + + + NL +++ N+I + SS L +L
Sbjct: 210 TSLPDSISGCRMLDQLDVSENQIIRLP-ENLGRMPNLTDLNISINEIIELPSSFGELKRL 268
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L N L L +I + L + L N + + + + + L +
Sbjct: 269 QMLKADRNSLHN-LTSEIGKCQSLTELYLGQNFLTDL------PDTIGDLRQLTTLNVDC 321
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N + ++ + L+ L L N L + P ++L +LD++ N L L T K
Sbjct: 322 NNLSDIPDTIGNCKSLTVLSLRQNILTEL-PMTIGKCENLTVLDVASNKLPHLPFTVKV- 379
Query: 242 LPALEELFVSHN 253
L L+ L++S N
Sbjct: 380 LYKLQALWLSEN 391
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 49/198 (24%), Positives = 85/198 (42%)
Query: 98 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD-IRGLKRLRTVDLSYNKIN 156
+DSI + + ++ S + KL L L+ N + E LD + L+ LR +D+S N++
Sbjct: 15 VDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKE--LDHRLFSLRHLRILDVSDNELA 72
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI 216
++ +T + EL L N I L + L+ L+LS N + P+
Sbjct: 73 VLPA------EIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRL-PETIC 125
Query: 217 GLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
S+ +L ++ LT L + L L L N L + L L + DL N
Sbjct: 126 ECSSITILSLNETSLTLLPSNIGS-LTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQN 184
Query: 277 NIKAINIQLALKTQCQIF 294
++A+ ++ T + F
Sbjct: 185 ELEALPAEIGKLTSLREF 202
>UNIPROTKB|O61967 [details] [associations]
symbol:let-413 "Protein lap1" species:6239 "Caenorhabditis
elegans" [GO:0045108 "regulation of intermediate filament
polymerization or depolymerization" evidence=IMP] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IEP]
[GO:0015031 "protein transport" evidence=IEP] [GO:0005912 "adherens
junction" evidence=IDA] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
GO:GO:0009792 GO:GO:0030728 GO:GO:0007163 GO:GO:0015031
eggNOG:COG4886 GO:GO:0040011 GO:GO:0007155 GO:GO:0016323
GO:GO:0005912 GO:GO:0040035 GO:GO:0040015 SUPFAM:SSF50156
GO:GO:0007043 GO:GO:0060465 GO:GO:0030029 EMBL:AJ276590
EMBL:FO081227 PIR:T33295 RefSeq:NP_001023850.1
RefSeq:NP_001023851.1 UniGene:Cel.6189 ProteinModelPortal:O61967
SMR:O61967 DIP:DIP-25349N IntAct:O61967 MINT:MINT-1058604
STRING:O61967 PaxDb:O61967 PRIDE:O61967 EnsemblMetazoa:F26D11.11b
GeneID:179171 KEGG:cel:CELE_F26D11.11 UCSC:F26D11.11a CTD:179171
WormBase:F26D11.11a WormBase:F26D11.11b
GeneTree:ENSGT00650000093182 HOGENOM:HOG000116557 InParanoid:O61967
OMA:FERHNTP NextBio:904226 GO:GO:0045108 Uniprot:O61967
Length = 699
Score = 206 (77.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 75/275 (27%), Positives = 128/275 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L DLN L +NN +K L+ +L +L L++L + N+L LP++I +QL L N N I
Sbjct: 38 LEDLN-LTMNN--IKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSI 94
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
L ++ L N+ N T + + ++ +SL +T + S++ LT L
Sbjct: 95 AKLPDTMQNCKLLTTLNLSSNPFTRLP-ETICECSSITILSLNETSLTLLPSNIGSLTNL 153
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L N L L + L++L +DL N++ GK +T++ E +
Sbjct: 154 RVLEARDNLLRTIPLSIVE-LRKLEELDLGQNELEALPAEI-GK-----LTSLREFYVDI 206
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N + +L ++ G L +LD+S N++ + P++ + +L L+IS N + L +S
Sbjct: 207 NSLTSLPDSISGCRMLDQLDVSENQIIRL-PENLGRMPNLTDLNISINEIIELP-SSFGE 264
Query: 242 LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
L L+ L NSL L + L + L N
Sbjct: 265 LKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQN 299
Score = 192 (72.6 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 66/244 (27%), Positives = 116/244 (47%)
Query: 35 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 94
Q+ L+A+PSDI F +L L N I LD L L L++ ++ N++ ++ E N
Sbjct: 22 QSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPA-EIGN 80
Query: 95 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L L ++L N I + ++ L L LS N T L + I + + L+
Sbjct: 81 LTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTR-LPETICECSSITILSLNETS 139
Query: 155 INKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDD 214
+ + N G +TN+ L+ + N + + +++ + L LDL N+L + P +
Sbjct: 140 LTLLPS-NIGS-----LTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEAL-PAE 192
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLA 274
L SL+ + N LT+L + S + L++L VS N + RL ++ +P L +++
Sbjct: 193 IGKLTSLREFYVDINSLTSLPD-SISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNIS 251
Query: 275 HNNI 278
N I
Sbjct: 252 INEI 255
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 66/252 (26%), Positives = 115/252 (45%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT+L L +N L+++ + L KL+ L + QN+LEALP++I + L Y + N +
Sbjct: 150 LTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSL 209
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 121
TSL + G L ++ NQI + + + NL +++ N+I + SS L +L
Sbjct: 210 TSLPDSISGCRMLDQLDVSENQIIRLP-ENLGRMPNLTDLNISINEIIELPSSFGELKRL 268
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
L N L L +I + L + L N + + + + + L +
Sbjct: 269 QMLKADRNSLHN-LTSEIGKCQSLTELYLGQNFLTDL------PDTIGDLRQLTTLNVDC 321
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N + ++ + L+ L L N L + P ++L +LD++ N L L T K
Sbjct: 322 NNLSDIPDTIGNCKSLTVLSLRQNILTEL-PMTIGKCENLTVLDVASNKLPHLPFTVKV- 379
Query: 242 LPALEELFVSHN 253
L L+ L++S N
Sbjct: 380 LYKLQALWLSEN 391
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 49/198 (24%), Positives = 85/198 (42%)
Query: 98 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD-IRGLKRLRTVDLSYNKIN 156
+DSI + + ++ S + KL L L+ N + E LD + L+ LR +D+S N++
Sbjct: 15 VDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKE--LDHRLFSLRHLRILDVSDNELA 72
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI 216
++ +T + EL L N I L + L+ L+LS N + P+
Sbjct: 73 VLPA------EIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRL-PETIC 125
Query: 217 GLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
S+ +L ++ LT L + L L L N L + L L + DL N
Sbjct: 126 ECSSITILSLNETSLTLLPSNIGS-LTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQN 184
Query: 277 NIKAINIQLALKTQCQIF 294
++A+ ++ T + F
Sbjct: 185 ELEALPAEIGKLTSLREF 202
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 154 (59.3 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 53/156 (33%), Positives = 76/156 (48%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + + NQ+ E P Q L SL N+IT L G
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRG 375
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLY 125
+ GL LQ+ ++ N+I VR D FQ+L NL +SL +N+I S+ + + L + L+
Sbjct: 376 VFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLH 435
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
L+ N F+ D LK L L N I G R
Sbjct: 436 LAQNP---FICDC--NLKWLADF-LRTNPIETSGAR 465
Score = 154 (59.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 52/169 (30%), Positives = 81/169 (47%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T +D GLK+LR + L N+I G G + + L+L N+
Sbjct: 66 LELNGNNITRIHKNDFVGLKQLRVLQLMENQI---GVVERGA--FDDMKELERLRLNRNQ 120
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+ L L LSRLDLS N ++ I F G LK L + N ++ +EE + L
Sbjct: 121 LHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
LE L +++N++T + F+ +P L L H+N + LA +Q
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL-HSNHLFCDCHLAWLSQ 228
Score = 137 (53.3 bits), Expect = 7.8e-13, Sum P(4) = 7.8e-13
Identities = 43/135 (31%), Positives = 68/135 (50%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANN 58
GL L L L N++ +E G + +L+ L + +NQL LP + +Q L L +
Sbjct: 83 GLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSE 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N I ++ RG T L+ +D NQI+ + F+ L L+ ++L NN IT++ SS +
Sbjct: 143 NTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFN 202
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 203 HMPKLRTFRLHSNHL 217
Score = 134 (52.2 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 45/155 (29%), Positives = 72/155 (46%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQL---TEFLLD 137
N IT + +++F L L + L NQI + + + +L L L+ NQL E L
Sbjct: 71 NNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQ 130
Query: 138 DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHG 196
+ + L RL DLS N I + +G T++ L+L N+I ++ GA + G
Sbjct: 131 NNQALSRL---DLSENTIQAIP-----RKAFRGATDLKNLQLDKNQISCIEEGAFRALRG 182
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
L L L++N + TI F + L+ + N L
Sbjct: 183 LEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 123 (48.4 bits), Expect = 7.8e-13, Sum P(4) = 7.8e-13
Identities = 34/112 (30%), Positives = 61/112 (54%)
Query: 143 KRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLD 201
++LR +DLS N+I + + QG+ ++ L L N+I +L G G++ L L
Sbjct: 333 RKLRRIDLSNNQIAEIAP-----DAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLL 387
Query: 202 LSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHN 253
L+ NK+ + PD F L +L +L + N + +L + + T L A++ L ++ N
Sbjct: 388 LNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 122 (48.0 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 33/130 (25%), Positives = 63/130 (48%)
Query: 31 LVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMV 87
L + N++ L + + + L + +NN+++ + DG G + ++ NQ+ +
Sbjct: 545 LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
R F+ L L ++ L+NN+I+ + N S +GL + L L NQ+ L+ L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALS 664
Query: 147 TVDLSYNKIN 156
T++L N N
Sbjct: 665 TLNLLANPFN 674
Score = 120 (47.3 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 37 QLEALPSDIQLFSQLGSLYANNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRRDEFQN 94
+L +P I L NNN I+ L+ G+ + LT L+ N+ N+++ + F+
Sbjct: 530 KLTKIPERIP--QSTAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEG 587
Query: 95 LHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 153
++ + L NQ+ S+ S + GL L L L +N+++ D GL+ +R + L N
Sbjct: 588 AASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDN 647
Query: 154 KI 155
+I
Sbjct: 648 QI 649
Score = 116 (45.9 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 35/127 (27%), Positives = 64/127 (50%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN + LE G L+ L+ + + N++ + + + + L+ N++ S+
Sbjct: 545 LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 65 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
G+ RGL L+ + N+I+ + D F L N+ +SL +NQI +++ + L L+
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALS 664
Query: 123 YLYLSHN 129
L L N
Sbjct: 665 TLNLLAN 671
Score = 110 (43.8 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 171 VTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
+T++ ++ L +N++ + DGA G +S L L+ N+L +I F GLD L+ L + +N
Sbjct: 564 LTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNN 623
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLA 286
++ + S T L + L + N + + F L L +L N N QLA
Sbjct: 624 RISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNC-NCQLA 680
Score = 98 (39.6 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
LT L + L+NN++ +E G + + L + NQLE++ S + + L +L NN
Sbjct: 564 LTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNN 623
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
RI+ + + GL +++ ++ NQI + F L L +++L N + N L+ L
Sbjct: 624 RISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPF-NCNCQLAWL 682
Score = 97 (39.2 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 176 ELKLQHNEIENLD--GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
EL+L +NEI L+ G + L +++LS+NK+ I F G S+ L ++ N L +
Sbjct: 544 ELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 603
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
+ L L L + +N ++ + D F GL + L N I I+
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATIS 653
Score = 96 (38.9 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N+I +L + + + L+ L LS+N L+ I P F GL SL++L + N ++TL E
Sbjct: 791 LSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLREG 850
Query: 238 SKTFLPALEELFVSHNSL 255
T + +L L + N L
Sbjct: 851 IFTDVTSLSHLAIGANPL 868
Score = 91 (37.1 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
N+ EL L N+ + G L L +DLS+NK+ ++S F + L L +S+N L
Sbjct: 762 NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 233 TLEETSKTFLPALEELFVSHNSLTRL 258
+ + L +L L + N ++ L
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDISTL 847
Score = 68 (29.0 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 27/102 (26%), Positives = 46/102 (45%)
Query: 177 LKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N+I + A G+ L+ L L NK+ + F GL +L++L ++ N + +
Sbjct: 338 IDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVR 397
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHN 276
+ L L L + N + L K F L + LA N
Sbjct: 398 PDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 66 (28.3 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 22/87 (25%), Positives = 44/87 (50%)
Query: 198 SRLDLSHNKLRTISPDD-FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
+ L L++N++ + F L LK +++S+N ++ +E+ + ++ EL ++ N L
Sbjct: 543 AELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLE 602
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAIN 282
+ F GL L L +N I I+
Sbjct: 603 SIRSGMFRGLDGLRTLMLRNNRISCIH 629
Score = 41 (19.5 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHG 333
+ LNS +Y+ G PV D A + +N T HG
Sbjct: 1277 YTLNSEAPLYVGGMPV---DVNSAAFRLWQILNG-TSFHG 1312
Score = 38 (18.4 bits), Expect = 7.8e-13, Sum P(4) = 7.8e-13
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAIN 282
EL++ N T + L DL++N I +++
Sbjct: 765 ELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLS 800
>TAIR|locus:2197563 [details] [associations]
symbol:AT1G33590 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006952 "defense
response" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] [GO:0005618 "cell wall" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009617 "response to bacterium"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] Pfam:PF00560 InterPro:IPR001611
EMBL:CP002684 GO:GO:0009507 GO:GO:0080167 GO:GO:0009505
InterPro:IPR013210 Pfam:PF08263 IPI:IPI00516781 RefSeq:NP_564426.1
UniGene:At.26728 ProteinModelPortal:F4HR88 SMR:F4HR88 PRIDE:F4HR88
EnsemblPlants:AT1G33590.1 GeneID:840253 KEGG:ath:AT1G33590
OMA:YLELGHN Uniprot:F4HR88
Length = 477
Score = 203 (76.5 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 76/285 (26%), Positives = 128/285 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G D+ FL+ SL +L L + ++ N + P + L +Y NNR
Sbjct: 80 GQADVAGSFLSGTLSPSL-AKLKHLDGIYFTDLK-NITGSFPQFLFQLPNLKYVYIENNR 137
Query: 61 IT-SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSLSGL 118
++ +L + L++L+ F+++ N+ T NL L + L NN +T ++ ++ L
Sbjct: 138 LSGTLPANIGALSQLEAFSLEGNRFTGPIPSSISNLTLLTQLKLGNNLLTGTIPLGVANL 197
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE-L 177
++YL L N+LT + D + + LR++ LS N G + + I L
Sbjct: 198 KLMSYLNLGGNRLTGTIPDIFKSMPELRSLTLSRN-----GFSGNLPPSIASLAPILRFL 252
Query: 178 KLQHNEIEN-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
+L HN++ + L L LDLS N+ + P F L + LD+SHNLLT +
Sbjct: 253 ELGHNKLSGTIPNFLSNFKALDTLDLSKNRFSGVIPKSFANLTKIFNLDLSHNLLT--DP 310
Query: 237 TSKTFLPALEELFVSHNS--LTRLDKDFHGLPVLCKADLAHNNIK 279
+ +E L +S+N L + K P++ LA IK
Sbjct: 311 FPVLNVKGIESLDLSYNQFHLNTIPKWVTSSPIIFSLKLAKCGIK 355
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 146 (56.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 40/124 (32%), Positives = 68/124 (54%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + I +NQ+ + P Q L SL N+IT + G
Sbjct: 314 LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKG 373
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 125
L GL LQ+ ++ N+I +R + FQ+L NL+ +SL +N++ +++ L + L + L+
Sbjct: 374 LFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLH 433
Query: 126 LSHN 129
L+ N
Sbjct: 434 LAQN 437
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L N +T D GLK LR + L N+++ + Q + + L+L N+
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIE-----RGAFQDLKQLERLRLNKNK 120
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L L+RLDLS N+++ I F G+ +K L + +N ++ +E+ + L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 243 PALEELFVSHNSLTR-LDKDFHGLPVLCKADLAHNN 277
LE L +++N+++R L F+ +P + L H+N
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRL-HSN 215
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/168 (26%), Positives = 84/168 (50%)
Query: 69 RGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYL 126
RG+ + + ++D N IT + + +F L NL + L++NQ++ + + L +L L L
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRL 116
Query: 127 SHNQLTEFLLDDI--RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
+ N+L +L ++ + +L +DLS N+I + +GVT + L+L +N I
Sbjct: 117 NKNKLQ--VLPELLFQSTPKLTRLDLSENQIQGIP-----RKAFRGVTGVKNLQLDNNHI 169
Query: 185 ENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ DGA + L L L++N + I F + ++ L + N L
Sbjct: 170 SCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL N + I+ DF GL +L++L + N ++ +E + L LE L ++ N L L
Sbjct: 65 RLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVL 124
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F P L + DL+ N I+ I + A + G+ + L+ N + C D +
Sbjct: 125 PELLFQSTPKLTRLDLSENQIQGIP-RKAFR------GVTGVKNLQLDNNHISCIEDGAF 177
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 178 RALRDLEILTLNNN 191
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 43/155 (27%), Positives = 74/155 (47%)
Query: 101 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFG 159
+ N +++ + S L T L L+ N + I + L LR ++LS N+I +
Sbjct: 516 VDCSNQKLSRIPSHLPEYT--TDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEV- 572
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGL 218
EG G + EL L N++E + G + G+ GL L L N + ++ D F GL
Sbjct: 573 --REGA--FDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGL 628
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHN 253
S+++L + N +TT+ + T L +L + + N
Sbjct: 629 SSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 132 (51.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
I E++L+ N I+++ GA + L R+D+S N++ I+PD F GL SL L + N +T
Sbjct: 309 IVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQC 291
+ + L +L+ L ++ N + L + F L L L N ++ I+ L Q
Sbjct: 369 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ- 427
Query: 292 QIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
S ++L NP +CD ++ + D ++ +N + G P
Sbjct: 428 ------SIQTLHLAQNPFVCDCHLKWLADYLQ--DNPIETSGARCSSP 467
Score = 131 (51.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL +L L L +N++ +E G L +L+ L + +N+L+ LP + Q +L L +
Sbjct: 83 GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLS 116
N+I + RG+T ++ +D N I+ + F+ L +L+ ++L NN I+ + +S +
Sbjct: 143 NQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 117 GLTKLAYLYLSHNQL 131
+ K+ L L N L
Sbjct: 203 HMPKIRTLRLHSNHL 217
Score = 130 (50.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P I ++ L NN RIT +D GL L+V +++ NQ++++ R FQ+L
Sbjct: 52 LRAVPRGIPRNAERLDLDRNNITRITKMD--FTGLKNLRVLHLEDNQVSVIERGAFQDLK 109
Query: 97 NLDSISLQNNQITSMNSSLSGLT-KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N++ + L T KL L LS NQ+ RG+ ++ + L N I
Sbjct: 110 QLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHI 169
Query: 156 N 156
+
Sbjct: 170 S 170
Score = 128 (50.1 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 38/147 (25%), Positives = 70/147 (47%)
Query: 12 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLL-R 69
NN + + L L++L +E NQ+ + Q QL L N N++ L LL +
Sbjct: 71 NNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSH 128
KL ++ NQI + R F+ + + ++ L NN I+ + + + L L L L++
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNN 190
Query: 129 NQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N ++ L+ + ++RT+ L N +
Sbjct: 191 NNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 109 (43.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 36 NQ-LEALPSDIQLFSQLGSLYANNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRRDEF 92
NQ L +PS + ++ L N+N I L+ G+ + L L+ N+ N+I VR F
Sbjct: 520 NQKLSRIPSHLPEYTT--DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAF 577
Query: 93 QNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
+ + L NQ+ +M+ + GL+ L L L N ++ D GL +R + L
Sbjct: 578 DGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLY 637
Query: 152 YNKI 155
N+I
Sbjct: 638 DNRI 641
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/108 (28%), Positives = 60/108 (55%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
L +L + L+NNR+K + EG + +Q L++ NQLE + + + S L +L +N
Sbjct: 556 LPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSN 615
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 106
I+ ++ GL+ +++ ++ N+IT + F L +L +I+L +N
Sbjct: 616 LISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 98 (39.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSL-DGLLRGLTKLQVFNMDFNQITM 86
L + N + L + +F +L +L +NNRI + +G G +Q + NQ+
Sbjct: 537 LRLNDNDIAVLEAT-GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLET 595
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
+ F+ L L ++ L++N I+ +N+ + +GL+ + L L N++T L L
Sbjct: 596 MHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSL 655
Query: 146 RTVDLSYNKIN 156
T++L N N
Sbjct: 656 STINLLSNPFN 666
Score = 96 (38.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 3 TDLNWLFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNN 59
TDL LN+N + LE G L L+ + + N++ E + + L N
Sbjct: 535 TDLR---LNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGN 591
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
++ ++ G + RGL+ L+ + N I+ V D F L ++ +SL +N+IT+++ + +
Sbjct: 592 QLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTT 651
Query: 118 LTKLAYLYLSHN 129
L L+ + L N
Sbjct: 652 LVSLSTINLLSN 663
Score = 95 (38.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 36/132 (27%), Positives = 60/132 (45%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
T DL N N E + + N+ ++ L +N I+ + +GA G G+ L L+ N
Sbjct: 534 TTDLRLND-NDIAVL-EATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGN 591
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L T+ F GL LK L + NL++ + + L ++ L + N +T + F
Sbjct: 592 QLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTT 651
Query: 265 LPVLCKADLAHN 276
L L +L N
Sbjct: 652 LVSLSTINLLSN 663
Score = 87 (35.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/112 (24%), Positives = 53/112 (47%)
Query: 97 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
++ + L+ N +T++ LS +L + LS+N ++ + L T+ LSYN++
Sbjct: 753 DVTELYLEGNHLTAVPKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKL 207
+ G+ ++ L L N+I ++ +G+ + LS L L N L
Sbjct: 813 CIPV-----HAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 85 (35.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + LS L LS+N+LR I F GL SL++L + N ++++
Sbjct: 780 IDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVP 839
Query: 236 ETSKTFLPALEELFVSHNSL 255
E S L +L L + N L
Sbjct: 840 EGSFNDLTSLSHLALGINPL 859
Score = 84 (34.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/89 (28%), Positives = 41/89 (46%)
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
G+ + L N +++I FI LK +DIS N ++ + + L +L L + N +
Sbjct: 308 GIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 256 TRLDKD-FHGLPVLCKADLAHNNIKAINI 283
T + K F GL L L N I + +
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRV 396
Score = 75 (31.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF--LPALEELFVSHNS 254
++ L L N L + P + L ++D+S+N ++ L T+ TF + L L +S+N
Sbjct: 754 VTELYLEGNHLTAV-PKELSTFRQLTLIDLSNNSISML--TNHTFSNMSHLSTLILSYNR 810
Query: 255 LTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDD 313
L + F+GL L L N+I ++ + L S + L NP+ CD
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSV-------PEGSFNDLTSLSHLALGINPLHCDC 863
Query: 314 SMR 316
S+R
Sbjct: 864 SLR 866
Score = 72 (30.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
++ EL L+ N + + L L+ +DLS+N + ++ F + L L +S+N L
Sbjct: 753 DVTELYLEGNHLTAVPKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHN 276
+ + L +L L + N ++ + + F+ L L L N
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 146 (56.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 40/124 (32%), Positives = 68/124 (54%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + I +NQ+ + P Q L SL N+IT + G
Sbjct: 314 LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKG 373
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 125
L GL LQ+ ++ N+I +R + FQ+L NL+ +SL +N++ +++ L + L + L+
Sbjct: 374 LFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLH 433
Query: 126 LSHN 129
L+ N
Sbjct: 434 LAQN 437
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L N +T D GLK LR + L N+++ + Q + + L+L N+
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIE-----RGAFQDLKQLERLRLNKNK 120
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L L+RLDLS N+++ I F G+ +K L + +N ++ +E+ + L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 243 PALEELFVSHNSLTR-LDKDFHGLPVLCKADLAHNN 277
LE L +++N+++R L F+ +P + L H+N
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRL-HSN 215
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/168 (26%), Positives = 84/168 (50%)
Query: 69 RGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYL 126
RG+ + + ++D N IT + + +F L NL + L++NQ++ + + L +L L L
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRL 116
Query: 127 SHNQLTEFLLDDI--RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
+ N+L +L ++ + +L +DLS N+I + +GVT + L+L +N I
Sbjct: 117 NKNKLQ--VLPELLFQSTPKLTRLDLSENQIQGIP-----RKAFRGVTGVKNLQLDNNHI 169
Query: 185 ENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ DGA + L L L++N + I F + ++ L + N L
Sbjct: 170 SCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL N + I+ DF GL +L++L + N ++ +E + L LE L ++ N L L
Sbjct: 65 RLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVL 124
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F P L + DL+ N I+ I + A + G+ + L+ N + C D +
Sbjct: 125 PELLFQSTPKLTRLDLSENQIQGIP-RKAFR------GVTGVKNLQLDNNHISCIEDGAF 177
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 178 RALRDLEILTLNNN 191
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 43/155 (27%), Positives = 74/155 (47%)
Query: 101 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFG 159
+ N +++ + S L T L L+ N + I + L LR ++LS N+I +
Sbjct: 516 VDCSNQKLSRIPSHLPEYT--TDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEV- 572
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGL 218
EG G + EL L N++E + G + G+ GL L L N + ++ D F GL
Sbjct: 573 --REGA--FDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGL 628
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHN 253
S+++L + N +TT+ + T L +L + + N
Sbjct: 629 SSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 132 (51.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
I E++L+ N I+++ GA + L R+D+S N++ I+PD F GL SL L + N +T
Sbjct: 309 IVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQC 291
+ + L +L+ L ++ N + L + F L L L N ++ I+ L Q
Sbjct: 369 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQ- 427
Query: 292 QIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
S ++L NP +CD ++ + D ++ +N + G P
Sbjct: 428 ------SIQTLHLAQNPFVCDCHLKWLADYLQ--DNPIETSGARCSSP 467
Score = 131 (51.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL +L L L +N++ +E G L +L+ L + +N+L+ LP + Q +L L +
Sbjct: 83 GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLS 116
N+I + RG+T ++ +D N I+ + F+ L +L+ ++L NN I+ + +S +
Sbjct: 143 NQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 117 GLTKLAYLYLSHNQL 131
+ K+ L L N L
Sbjct: 203 HMPKIRTLRLHSNHL 217
Score = 130 (50.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P I ++ L NN RIT +D GL L+V +++ NQ++++ R FQ+L
Sbjct: 52 LRAVPRGIPRNAERLDLDRNNITRITKMD--FTGLKNLRVLHLEDNQVSVIERGAFQDLK 109
Query: 97 NLDSISLQNNQITSMNSSLSGLT-KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N++ + L T KL L LS NQ+ RG+ ++ + L N I
Sbjct: 110 QLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHI 169
Query: 156 N 156
+
Sbjct: 170 S 170
Score = 128 (50.1 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 38/147 (25%), Positives = 70/147 (47%)
Query: 12 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLL-R 69
NN + + L L++L +E NQ+ + Q QL L N N++ L LL +
Sbjct: 71 NNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSH 128
KL ++ NQI + R F+ + + ++ L NN I+ + + + L L L L++
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNN 190
Query: 129 NQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N ++ L+ + ++RT+ L N +
Sbjct: 191 NNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 109 (43.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 36 NQ-LEALPSDIQLFSQLGSLYANNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRRDEF 92
NQ L +PS + ++ L N+N I L+ G+ + L L+ N+ N+I VR F
Sbjct: 520 NQKLSRIPSHLPEYTT--DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAF 577
Query: 93 QNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
+ + L NQ+ +M+ + GL+ L L L N ++ D GL +R + L
Sbjct: 578 DGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLY 637
Query: 152 YNKI 155
N+I
Sbjct: 638 DNRI 641
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/108 (28%), Positives = 60/108 (55%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
L +L + L+NNR+K + EG + +Q L++ NQLE + + + S L +L +N
Sbjct: 556 LPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSN 615
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 106
I+ ++ GL+ +++ ++ N+IT + F L +L +I+L +N
Sbjct: 616 LISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 98 (39.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSL-DGLLRGLTKLQVFNMDFNQITM 86
L + N + L + +F +L +L +NNRI + +G G +Q + NQ+
Sbjct: 537 LRLNDNDIAVLEAT-GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLET 595
Query: 87 VRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
+ F+ L L ++ L++N I+ +N+ + +GL+ + L L N++T L L
Sbjct: 596 MHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSL 655
Query: 146 RTVDLSYNKIN 156
T++L N N
Sbjct: 656 STINLLSNPFN 666
Score = 96 (38.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 3 TDLNWLFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNN 59
TDL LN+N + LE G L L+ + + N++ E + + L N
Sbjct: 535 TDLR---LNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGN 591
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
++ ++ G + RGL+ L+ + N I+ V D F L ++ +SL +N+IT+++ + +
Sbjct: 592 QLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTT 651
Query: 118 LTKLAYLYLSHN 129
L L+ + L N
Sbjct: 652 LVSLSTINLLSN 663
Score = 95 (38.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 36/132 (27%), Positives = 60/132 (45%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
T DL N N E + + N+ ++ L +N I+ + +GA G G+ L L+ N
Sbjct: 534 TTDLRLND-NDIAVL-EATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGN 591
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L T+ F GL LK L + NL++ + + L ++ L + N +T + F
Sbjct: 592 QLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTT 651
Query: 265 LPVLCKADLAHN 276
L L +L N
Sbjct: 652 LVSLSTINLLSN 663
Score = 87 (35.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/112 (24%), Positives = 53/112 (47%)
Query: 97 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
++ + L+ N +T++ LS +L + LS+N ++ + L T+ LSYN++
Sbjct: 753 DVTELYLEGNHLTAVPKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKL 207
+ G+ ++ L L N+I ++ +G+ + LS L L N L
Sbjct: 813 CIPV-----HAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 85 (35.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + LS L LS+N+LR I F GL SL++L + N ++++
Sbjct: 780 IDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVP 839
Query: 236 ETSKTFLPALEELFVSHNSL 255
E S L +L L + N L
Sbjct: 840 EGSFNDLTSLSHLALGINPL 859
Score = 84 (34.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/89 (28%), Positives = 41/89 (46%)
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
G+ + L N +++I FI LK +DIS N ++ + + L +L L + N +
Sbjct: 308 GIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 256 TRLDKD-FHGLPVLCKADLAHNNIKAINI 283
T + K F GL L L N I + +
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRV 396
Score = 75 (31.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF--LPALEELFVSHNS 254
++ L L N L + P + L ++D+S+N ++ L T+ TF + L L +S+N
Sbjct: 754 VTELYLEGNHLTAV-PKELSTFRQLTLIDLSNNSISML--TNHTFSNMSHLSTLILSYNR 810
Query: 255 LTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDD 313
L + F+GL L L N+I ++ + L S + L NP+ CD
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSV-------PEGSFNDLTSLSHLALGINPLHCDC 863
Query: 314 SMR 316
S+R
Sbjct: 864 SLR 866
Score = 72 (30.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
++ EL L+ N + + L L+ +DLS+N + ++ F + L L +S+N L
Sbjct: 753 DVTELYLEGNHLTAVPKELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHN 276
+ + L +L L + N ++ + + F+ L L L N
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 145 (56.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 40/124 (32%), Positives = 67/124 (54%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + I +NQ+ + P Q L SL N+IT + G
Sbjct: 314 LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKG 373
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-GLTKLAYLY 125
L GL LQ+ ++ N+I +R + FQ+L NL+ +SL +N++ +++ L L + L+
Sbjct: 374 LFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLH 433
Query: 126 LSHN 129
L+ N
Sbjct: 434 LAQN 437
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/168 (26%), Positives = 84/168 (50%)
Query: 69 RGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYL 126
RG+ + + ++D N IT + + +F L NL + L++NQ++ + + L +L L L
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRL 116
Query: 127 SHNQLTEFLLDDI--RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
+ N+L +L ++ + +L +DLS N+I + +GVT + L+L +N I
Sbjct: 117 NKNKLQ--VLPELLFQSTPKLTRLDLSENQIQGIP-----RKAFRGVTGVKNLQLDNNHI 169
Query: 185 ENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ DGA + L L L++N + I F + ++ L + N L
Sbjct: 170 SCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L N +T D GLK LR + L N+++ + Q + + L+L N+
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIE-----RGAFQDLKQLERLRLNKNK 120
Query: 184 IENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++ L L L+RLDLS N+++ I F G+ +K L + +N ++ +E+ + L
Sbjct: 121 LQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 243 PALEELFVSHNSLTR-LDKDFHGLPVLCKADLAHNN 277
LE L +++N+++R L F+ +P + L H+N
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRL-HSN 215
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 199 RLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
RLDL N + I+ DF GL +L++L + N ++ +E + L LE L ++ N L L
Sbjct: 65 RLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVL 124
Query: 259 DKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--DDSM 315
+ F P L + DL+ N I+ I + A + G+ + L+ N + C D +
Sbjct: 125 PELLFQSTPKLTRLDLSENQIQGIP-RKAFR------GVTGVKNLQLDNNHISCIEDGAF 177
Query: 316 RAVIDA-METINNN 328
RA+ D + T+NNN
Sbjct: 178 RALRDLEILTLNNN 191
Score = 132 (51.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
I E++L+ N I+++ GA L R+D+S N++ I+PD F GL SL L + N +T
Sbjct: 309 IVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQC 291
+ + L +L+ L ++ N + L + F L L L N ++ I+ L + Q
Sbjct: 369 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQ- 427
Query: 292 QIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
S ++L NP +CD ++ + D ++ +N + G P
Sbjct: 428 ------SIQTLHLAQNPFVCDCHLKWLADYLQ--DNPIETSGARCSSP 467
Score = 131 (51.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL +L L L +N++ +E G L +L+ L + +N+L+ LP + Q +L L +
Sbjct: 83 GLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLS 116
N+I + RG+T ++ +D N I+ + F+ L +L+ ++L NN I+ + +S +
Sbjct: 143 NQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 117 GLTKLAYLYLSHNQL 131
+ K+ L L N L
Sbjct: 203 HMPKIRTLRLHSNHL 217
Score = 130 (50.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 38 LEALPSDIQLFSQLGSLYANN-NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L A+P I ++ L NN RIT +D GL L+V +++ NQ++++ R FQ+L
Sbjct: 52 LRAVPRGIPRNAERLDLDRNNITRITKMD--FAGLKNLRVLHLEDNQVSIIERGAFQDLK 109
Query: 97 NLDSISLQNNQITSMNSSLSGLT-KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L+ + L N++ + L T KL L LS NQ+ RG+ ++ + L N I
Sbjct: 110 QLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHI 169
Query: 156 N 156
+
Sbjct: 170 S 170
Score = 130 (50.8 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 43/155 (27%), Positives = 73/155 (47%)
Query: 101 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFG 159
+ N ++ + S L T L L+ N ++ I + L LR ++LS N+I +
Sbjct: 516 VDCSNQKLARIPSHLPEYT--TDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEV- 572
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGL 218
EG G + EL L N++E + G + G+ L L L N + +S D F GL
Sbjct: 573 --REGA--FDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGL 628
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHN 253
S+++L + N +TT+ + T L +L + + N
Sbjct: 629 SSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 129 (50.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 38/147 (25%), Positives = 70/147 (47%)
Query: 12 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLL-R 69
NN + + L L++L +E NQ+ + Q QL L N N++ L LL +
Sbjct: 71 NNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSH 128
KL ++ NQI + R F+ + + ++ L NN I+ + + + L L L L++
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNN 190
Query: 129 NQLTEFLLDDIRGLKRLRTVDLSYNKI 155
N ++ L+ + ++RT+ L N +
Sbjct: 191 NNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 100 (40.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSL-DGLLRGLTKLQVFNMDFNQITM 86
L + N + L + +F +L +L +NNRI + +G G +Q + NQ+
Sbjct: 537 LRLNDNDISVLEAT-GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLET 595
Query: 87 VRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 145
+ F+ L +L ++ L++N I+ + N + +GL+ + L L N++T L L
Sbjct: 596 MHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSL 655
Query: 146 RTVDLSYNKIN 156
T++L N N
Sbjct: 656 STINLLSNPFN 666
Score = 97 (39.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 3 TDLNWLFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNN 59
TDL LN+N + LE G L L+ + + N++ E + + L N
Sbjct: 535 TDLR---LNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGN 591
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSG 117
++ ++ G + RGL+ L+ + N I+ V D F L ++ +SL +N+IT++ + +
Sbjct: 592 QLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTT 651
Query: 118 LTKLAYLYLSHN 129
L L+ + L N
Sbjct: 652 LVSLSTINLLSN 663
Score = 97 (39.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 79 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLD 137
++ N I + F L I + NQI+ + + GL L L L N++TE
Sbjct: 314 LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKG 373
Query: 138 DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHG 196
GL L+ + L+ NKIN N Q + N+ L L N+++ + G + +
Sbjct: 374 LFDGLVSLQLLLLNANKINCLRV-----NTFQDLQNLNLLSLYDNKLQTISKGLFVPLQS 428
Query: 197 LSRLDLSHN 205
+ L L+ N
Sbjct: 429 IQTLHLAQN 437
Score = 86 (35.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 177 LKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ L +N I L + LS L LS+N+LR I F GL SL++L + N ++++
Sbjct: 780 IDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVP 839
Query: 236 ETSKTFLPALEELFVSHNSL 255
E S L +L L + N L
Sbjct: 840 EGSFNDLTSLSHLALGTNPL 859
Score = 79 (32.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF--LPALEELFVSHNS 254
++ L L N L + P + L ++D+S+N ++ L T+ TF + L L +S+N
Sbjct: 754 VTELYLEGNHLTAV-PKELSAFRQLTLIDLSNNSISML--TNHTFSNMSHLSTLILSYNR 810
Query: 255 LTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDD 313
L + F+GL L L N+I ++ + L S + L NP+ CD
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSV-------PEGSFNDLTSLSHLALGTNPLHCDC 863
Query: 314 SMR 316
S+R
Sbjct: 864 SLR 866
Score = 79 (32.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 24/89 (26%), Positives = 40/89 (44%)
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
G+ + L N +++I F LK +DIS N ++ + + L +L L + N +
Sbjct: 308 GIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 256 TRLDKD-FHGLPVLCKADLAHNNIKAINI 283
T + K F GL L L N I + +
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRV 396
Score = 75 (31.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
++ EL L+ N + + L L+ +DLS+N + ++ F + L L +S+N L
Sbjct: 753 DVTELYLEGNHLTAVPKELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK-DFHGLPVLCKADLAHN 276
+ + L +L L + N ++ + + F+ L L L N
Sbjct: 813 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
>UNIPROTKB|B4DHD1 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
EMBL:AC107219 UniGene:Hs.591686 HGNC:HGNC:19718 HOVERGEN:HBG026354
HOGENOM:HOG000049056 EMBL:AC019341 EMBL:AC107056 EMBL:AC108017
EMBL:AC121161 EMBL:AC125489 EMBL:AK295040 IPI:IPI00910652
SMR:B4DHD1 STRING:B4DHD1 Ensembl:ENST00000448688 UCSC:uc010iql.3
Uniprot:B4DHD1
Length = 652
Score = 205 (77.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 66/226 (29%), Positives = 115/226 (50%)
Query: 26 SKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQ 83
S + + ++ N + LP D + + L LY NN+ITS+ RGL L + N+
Sbjct: 45 SNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNR 104
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDD--IR 140
IT ++ F++LH L+ + +++N ++ ++ + GL L L L +N LT L D +
Sbjct: 105 ITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTR-LPDKPLCQ 163
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSR 199
+ RL + + NKIN NE N + + EL L N+IENL + + LS+
Sbjct: 164 HMPRLHWLVMRKNKINHL---NE--NTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQ 218
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPAL 245
L+LS+N ++ I + F L LK L + ++ +++ + F P +
Sbjct: 219 LNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQ--RMFRPLM 262
Score = 171 (65.3 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 59/217 (27%), Positives = 103/217 (47%)
Query: 72 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQ 130
+ + ++ +N I + D F+N H+L + LQNN+ITS++ + GL L LYLSHN+
Sbjct: 45 SNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNR 104
Query: 131 LTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG 189
+T FL + L RL + + N +++ G+ ++ L L +N + L
Sbjct: 105 IT-FLKPGVFEDLHRLEWLIIEDNHLSRISPPT-----FYGLNSLILLVLMNNVLTRLPD 158
Query: 190 ALMGIH--GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ H L L + NK+ ++ + F L L LD+ N + L L L +
Sbjct: 159 KPLCQHMPRLHWLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQ 218
Query: 248 LFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQ 284
L +S+N + ++ + V K+ L+ I+ NIQ
Sbjct: 219 LNLSYNPIQKIQANQFDYLVKLKS-LSLEGIEISNIQ 254
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 49/186 (26%), Positives = 90/186 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL L L+L++NR+ L+ G L +L+ L+IE N L + P + L L N
Sbjct: 91 GLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMN 150
Query: 59 NRITSLDG--LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL- 115
N +T L L + + +L M N+I + + F L LD + L +N+I ++ +
Sbjct: 151 NVLTRLPDKPLCQHMPRLHWLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIF 210
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L +L+ L LS+N + + + L +L+++ L +I+ R + +++I+
Sbjct: 211 KDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMF--RPLMNLSHIY 268
Query: 176 ELKLQH 181
K Q+
Sbjct: 269 FKKFQY 274
>UNIPROTKB|E9PCA3 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0030154 GO:GO:0004930 GO:GO:0007189 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007567
InterPro:IPR000372 SMART:SM00013 EMBL:AC107219 GO:GO:0060427
HGNC:HGNC:19718 GO:GO:0060658 EMBL:AC019341 EMBL:AC107056
EMBL:AC108017 EMBL:AC121161 EMBL:AC125489 IPI:IPI00965023
ProteinModelPortal:E9PCA3 SMR:E9PCA3 Ensembl:ENST00000460056
ArrayExpress:E9PCA3 Bgee:E9PCA3 Uniprot:E9PCA3
Length = 676
Score = 205 (77.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 64/229 (27%), Positives = 112/229 (48%)
Query: 26 SKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQ 83
S + + ++ N + LP D + + L LY NN+ITS+ RGL L + N+
Sbjct: 45 SNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNR 104
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDD--IR 140
IT ++ F++LH L+ + +++N ++ ++ + GL L L L +N LT L D +
Sbjct: 105 ITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTR-LPDKPLCQ 163
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSR 199
+ RL +DL N I+ RN +N+ L ++ N+I +L + + L
Sbjct: 164 HMPRLHWLDLEGNHIHNL--RNL---TFISCSNLTVLVMRKNKINHLNENTFAPLQKLDE 218
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
LDL NK+ + P F L L L++S+N + ++ +L L+ L
Sbjct: 219 LDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSL 267
Score = 180 (68.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 61/215 (28%), Positives = 103/215 (47%)
Query: 72 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQ 130
+ + ++ +N I + D F+N H+L + LQNN+ITS++ + GL L LYLSHN+
Sbjct: 45 SNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNR 104
Query: 131 LTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG 189
+T FL + L RL + + N +++ G+ ++ L L +N + L
Sbjct: 105 IT-FLKPGVFEDLHRLEWLIIEDNHLSRISPPT-----FYGLNSLILLVLMNNVLTRLPD 158
Query: 190 ALMGIH--GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ H L LDL N + + FI +L +L + N + L E + L L+E
Sbjct: 159 KPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDE 218
Query: 248 LFVSHNSLTRLDK-DFHGLPVLCKADLAHNNIKAI 281
L + N + L F L L + +L++N I+ I
Sbjct: 219 LDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKI 253
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 56/192 (29%), Positives = 92/192 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL L L+L++NR+ L+ G L +L+ L+IE N L + P + L L N
Sbjct: 91 GLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMN 150
Query: 59 NRITSLDG--LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSL 115
N +T L L + + +L +++ N I +R F + NL + ++ N+I +N ++
Sbjct: 151 NVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTF 210
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+ L KL L L N++ + LK L ++LSYN I K NQ + +
Sbjct: 211 APLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQA-----NQFDYLVKLK 265
Query: 176 ELKLQHNEIENL 187
L L+ EI N+
Sbjct: 266 SLSLEGIEISNI 277
Score = 154 (59.3 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 60/225 (26%), Positives = 106/225 (47%)
Query: 28 LQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSLD-GLLRGLTKLQVFNMDFNQ 83
LQ L ++ N++ ++ I F L SL Y ++NRIT L G+ L +L+ ++ N
Sbjct: 71 LQKLYLQNNKITSI--SIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNH 128
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMNSS--LSGLTKLAYLYLSHNQLTEFLLDDIRG 141
++ + F L++L + L NN +T + + +L +L L N +
Sbjct: 129 LSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFIS 188
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRL 200
L + + NKIN NE N + + EL L N+IENL + + LS+L
Sbjct: 189 CSNLTVLVMRKNKINHL---NE--NTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQL 243
Query: 201 DLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPAL 245
+LS+N ++ I + F L LK L + ++ +++ + F P +
Sbjct: 244 NLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQ--RMFRPLM 286
>UNIPROTKB|Q9HBX9 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007188
"adenylate cyclase-modulating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007567 "parturition" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0042562
"hormone binding" evidence=IEA] [GO:0060427 "lung connective tissue
development" evidence=IEA] [GO:0060658 "nipple morphogenesis"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0030154 GO:GO:0046872
GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 EMBL:CH471056
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 EMBL:AF190500 EMBL:AY899848 EMBL:AY899849
EMBL:AY899850 EMBL:AK300379 EMBL:BC112142 EMBL:BC113617
IPI:IPI00012456 IPI:IPI00219888 IPI:IPI00654878 IPI:IPI00876893
RefSeq:NP_001240657.1 RefSeq:NP_001240658.1 RefSeq:NP_067647.2
UniGene:Hs.591686 PDB:2JM4 PDBsum:2JM4 ProteinModelPortal:Q9HBX9
SMR:Q9HBX9 MINT:MINT-231156 STRING:Q9HBX9 PhosphoSite:Q9HBX9
DMDM:166209887 PRIDE:Q9HBX9 DNASU:59350 Ensembl:ENST00000307765
Ensembl:ENST00000343542 Ensembl:ENST00000423548
Ensembl:ENST00000470033 Ensembl:ENST00000471616 GeneID:59350
KEGG:hsa:59350 UCSC:uc003ipz.3 UCSC:uc010iqm.3 UCSC:uc010iqo.3
CTD:59350 GeneCards:GC04P159236 H-InvDB:HIX0024561 HGNC:HGNC:19718
HPA:HPA027067 MIM:606654 neXtProt:NX_Q9HBX9 PharmGKB:PA134868312
HOVERGEN:HBG026354 InParanoid:Q9HBX9 KO:K04306 OMA:YTLTTRP
PhylomeDB:Q9HBX9 ChEMBL:CHEMBL1293316 EvolutionaryTrace:Q9HBX9
GenomeRNAi:59350 NextBio:65261 ArrayExpress:Q9HBX9 Bgee:Q9HBX9
CleanEx:HS_RXFP1 Genevestigator:Q9HBX9 GermOnline:ENSG00000171509
GO:GO:0060658 Uniprot:Q9HBX9
Length = 757
Score = 205 (77.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/229 (27%), Positives = 112/229 (48%)
Query: 26 SKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQ 83
S + + ++ N + LP D + + L LY NN+ITS+ RGL L + N+
Sbjct: 126 SNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNR 185
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDD--IR 140
IT ++ F++LH L+ + +++N ++ ++ + GL L L L +N LT L D +
Sbjct: 186 ITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTR-LPDKPLCQ 244
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSR 199
+ RL +DL N I+ RN +N+ L ++ N+I +L + + L
Sbjct: 245 HMPRLHWLDLEGNHIHNL--RNL---TFISCSNLTVLVMRKNKINHLNENTFAPLQKLDE 299
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
LDL NK+ + P F L L L++S+N + ++ +L L+ L
Sbjct: 300 LDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSL 348
Score = 180 (68.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 61/215 (28%), Positives = 103/215 (47%)
Query: 72 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQ 130
+ + ++ +N I + D F+N H+L + LQNN+ITS++ + GL L LYLSHN+
Sbjct: 126 SNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNR 185
Query: 131 LTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG 189
+T FL + L RL + + N +++ G+ ++ L L +N + L
Sbjct: 186 IT-FLKPGVFEDLHRLEWLIIEDNHLSRISPPT-----FYGLNSLILLVLMNNVLTRLPD 239
Query: 190 ALMGIH--GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ H L LDL N + + FI +L +L + N + L E + L L+E
Sbjct: 240 KPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDE 299
Query: 248 LFVSHNSLTRLDK-DFHGLPVLCKADLAHNNIKAI 281
L + N + L F L L + +L++N I+ I
Sbjct: 300 LDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKI 334
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 56/192 (29%), Positives = 92/192 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL L L+L++NR+ L+ G L +L+ L+IE N L + P + L L N
Sbjct: 172 GLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMN 231
Query: 59 NRITSLDG--LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSL 115
N +T L L + + +L +++ N I +R F + NL + ++ N+I +N ++
Sbjct: 232 NVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTF 291
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+ L KL L L N++ + LK L ++LSYN I K NQ + +
Sbjct: 292 APLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQA-----NQFDYLVKLK 346
Query: 176 ELKLQHNEIENL 187
L L+ EI N+
Sbjct: 347 SLSLEGIEISNI 358
Score = 154 (59.3 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 60/225 (26%), Positives = 106/225 (47%)
Query: 28 LQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSLD-GLLRGLTKLQVFNMDFNQ 83
LQ L ++ N++ ++ I F L SL Y ++NRIT L G+ L +L+ ++ N
Sbjct: 152 LQKLYLQNNKITSI--SIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNH 209
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMNSS--LSGLTKLAYLYLSHNQLTEFLLDDIRG 141
++ + F L++L + L NN +T + + +L +L L N +
Sbjct: 210 LSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFIS 269
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRL 200
L + + NKIN NE N + + EL L N+IENL + + LS+L
Sbjct: 270 CSNLTVLVMRKNKINHL---NE--NTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQL 324
Query: 201 DLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPAL 245
+LS+N ++ I + F L LK L + ++ +++ + F P +
Sbjct: 325 NLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQ--RMFRPLM 367
>RGD|1549776 [details] [associations]
symbol:Aspn "asporin" species:10116 "Rattus norvegicus"
[GO:0005509 "calcium ion binding" evidence=ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0015288
"porin activity" evidence=IEA] [GO:0030282 "bone mineralization"
evidence=ISO] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=ISO]
[GO:0046930 "pore complex" evidence=IEA] [GO:0070171 "negative
regulation of tooth mineralization" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:1549776 GO:GO:0005578 eggNOG:COG4886
GO:GO:0005509 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030282 GO:GO:0015288 CTD:54829 GeneTree:ENSGT00700000104006
HOGENOM:HOG000261690 HOVERGEN:HBG016052 KO:K08120 OMA:LCSAKPL
OrthoDB:EOG4KWJT1 GO:GO:0070171 GO:GO:0030512 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0046930 EMBL:CH473977 EMBL:BC083711
IPI:IPI00365784 RefSeq:NP_001014030.1 RefSeq:XP_003751698.1
UniGene:Rn.160633 SMR:Q5XIH1 IntAct:Q5XIH1 STRING:Q5XIH1
Ensembl:ENSRNOT00000020704 GeneID:306805 KEGG:rno:306805
InParanoid:Q5XIH1 NextBio:656531 Genevestigator:Q5XIH1
Uniprot:Q5XIH1
Length = 375
Score = 199 (75.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 58/247 (23%), Positives = 118/247 (47%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L ++PS+I +++ L NN+I + + +GLT L ++ N++T + F
Sbjct: 88 LTSVPSNIPFDTRMVDL--QNNKIKEIKENDFKGLTSLYALILNNNKLTKIHPKTFLTTK 145
Query: 97 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
L + L +NQ++ + +L LA L + N++ + D +G+ L +++S N ++
Sbjct: 146 KLRRLYLSHNQLSEIPLNLP--RSLAELRIHDNKVKKIQKDTFKGMNALHVLEMSANPLD 203
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI 216
G +GVT +F +++ ++ ++ L L L L NK+ T+ +DF
Sbjct: 204 NNGIE---PGAFEGVT-VFHIRIAEAKLTSIPKGLPPT--LLELHLDFNKISTVELEDFK 257
Query: 217 GLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
L+ L + +N +T +E + +P + E+ + HN L ++ L L L +N
Sbjct: 258 RYKELQRLGLGNNKITDIENGTFANIPRVREIHLEHNKLKKIPSGLQELKYLQIIFLHNN 317
Query: 277 NIKAINI 283
+I + +
Sbjct: 318 SITKVGV 324
Score = 180 (68.4 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 80/295 (27%), Positives = 142/295 (48%)
Query: 42 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 101
P Q +S++ ++ ++ +TS+ + T++ ++ N+I ++ ++F+ L +L ++
Sbjct: 71 PFGCQCYSRV--VHCSDLGLTSVPSNIPFDTRM--VDLQNNKIKEIKENDFKGLTSLYAL 126
Query: 102 SLQNNQITSMNSSLSGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 160
L NN++T ++ TK L LYLSHNQL+E L+ R L LR D KI K
Sbjct: 127 ILNNNKLTKIHPKTFLTTKKLRRLYLSHNQLSEIPLNLPRSLAELRIHDNKVKKIQK--D 184
Query: 161 RNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD- 219
+G N + V + L +N IE GA G+ + + ++ KL +I P GL
Sbjct: 185 TFKGMNALH-VLEMSANPLDNNGIE--PGAFEGVT-VFHIRIAEAKLTSI-PK---GLPP 236
Query: 220 SLKMLDISHNLLTTLE-ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
+L L + N ++T+E E K + L+ L + +N +T ++ F +P + + L HN
Sbjct: 237 TLLELHLDFNKISTVELEDFKRY-KELQRLGLGNNKITDIENGTFANIPRVREIHLEHNK 295
Query: 278 IKAINIQLALKTQCQIFGL--NSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTK 330
+K I L QI L NS ++ + +++ A+ NN K
Sbjct: 296 LKKIPSGLQELKYLQIIFLHNNSITKVGVNDFCPTVPKMKKSLYSAISLFNNPMK 350
Score = 170 (64.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 55/219 (25%), Positives = 100/219 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLG-TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GLT L L LNNN+L + + T KL+ L + NQL +P + L L L ++N
Sbjct: 119 GLTSLYALILNNNKLTKIHPKTFLTTKKLRRLYLSHNQLSEIP--LNLPRSLAELRIHDN 176
Query: 60 RITSLD-GLLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
++ + +G+ L V M N + + F+ + + I + ++TS+ L
Sbjct: 177 KVKKIQKDTFKGMNALHVLEMSANPLDNNGIEPGAFEGV-TVFHIRIAEAKLTSIPKGLP 235
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L+L N+++ L+D + K L+ + L NKI G + + E
Sbjct: 236 --PTLLELHLDFNKISTVELEDFKRYKELQRLGLGNNKITDI---ENGT--FANIPRVRE 288
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
+ L+HN+++ + L + L + L +N + + +DF
Sbjct: 289 IHLEHNKLKKIPSGLQELKYLQIIFLHNNSITKVGVNDF 327
>UNIPROTKB|F1S6B4 [details] [associations]
symbol:PRELP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0007569 "cell aging" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450 GO:GO:0031012
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 PANTHER:PTHR24371:SF15 OMA:NKLEHLY
EMBL:CU466494 Ensembl:ENSSSCT00000016640 Uniprot:F1S6B4
Length = 375
Score = 199 (75.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 64/239 (26%), Positives = 116/239 (48%)
Query: 3 TDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
T L W+ L+NNR++ ++ + L L L L +E+NQLE +PS + L L + N+I
Sbjct: 125 TGLRWINLDNNRIRKVDQRVLEKLPSLVFLYMEKNQLEEVPSALP--RNLEQLRLSQNQI 182
Query: 62 TSLD-GLLRGLTKLQVFNMDFNQIT--MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+ + G+ L L + ++ N+++ + + D FQ L NL ++L +N + M +
Sbjct: 183 SRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDTFQGLKNLMQLNLAHNILRKMPPKVP-- 240
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + LYL N++ +G L + L+YNK++ G N ++N+ L
Sbjct: 241 TAIHQLYLDSNKIETIPNGYFKGFPNLAFIRLNYNKLSDRGLPKNSFN----ISNLLVLH 296
Query: 179 LQHNEIEN---LDGALMGIH---GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
L HN+I N ++ L ++ + +S ++ T DD + L+ L + N L
Sbjct: 297 LSHNKISNVPAINNKLEHLYLNNNSIEIKMSISEFPTTIVDDLENVPHLRYLRLDGNYL 355
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 60/213 (28%), Positives = 103/213 (48%)
Query: 49 SQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 107
S++ LY NN IT L + T L+ N+D N+I V + + L +L + ++ NQ
Sbjct: 101 SRIHYLYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPSLVFLYMEKNQ 160
Query: 108 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQ 167
+ + S+L L L LS NQ++ L+ L +DL +NK++ G +
Sbjct: 161 LEEVPSALP--RNLEQLRLSQNQISRIPPGVFSKLENLLLLDLQHNKLSD-GVFKP--DT 215
Query: 168 VQGVTNIFELKLQHNEIENLDGAL-MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
QG+ N+ +L L HN + + + IH +L L NK+ TI F G +L + +
Sbjct: 216 FQGLKNLMQLNLAHNILRKMPPKVPTAIH---QLYLDSNKIETIPNGYFKGFPNLAFIRL 272
Query: 227 SHNLLTTLEETSKTF-LPALEELFVSHNSLTRL 258
++N L+ +F + L L +SHN ++ +
Sbjct: 273 NYNKLSDRGLPKNSFNISNLLVLHLSHNKISNV 305
>RGD|620984 [details] [associations]
symbol:Lum "lumican" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005518 "collagen
binding" evidence=IEA;ISO] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISO;IDA] [GO:0005583 "fibrillar collagen"
evidence=IEA;ISO] [GO:0005615 "extracellular space"
evidence=IEA;ISO] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEP] [GO:0070848 "response to growth factor
stimulus" evidence=IEP] [GO:0031012 "extracellular matrix"
evidence=ISO] InterPro:IPR001611 InterPro:IPR027219 PROSITE:PS51450
RGD:620984 GO:GO:0005615 GO:GO:0005578 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0014070 GO:GO:0051216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0070848
GO:GO:0005583 GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:X84039 EMBL:BC061878 IPI:IPI00206403
PIR:S52284 RefSeq:NP_112312.1 UniGene:Rn.3087
ProteinModelPortal:P51886 STRING:P51886 PRIDE:P51886
Ensembl:ENSRNOT00000006109 GeneID:81682 KEGG:rno:81682
UCSC:RGD:620984 InParanoid:P51886 NextBio:615304
Genevestigator:P51886 GermOnline:ENSRNOG00000004610 Uniprot:P51886
Length = 338
Score = 197 (74.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 73/268 (27%), Positives = 133/268 (49%)
Query: 28 LQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRI--TSLDG-LLRGLTKLQVFNMDFNQ 83
++ L + NQ++ + + + L L ++N + + + G + L +L+ ++++N
Sbjct: 68 IKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGKVFSKLKQLKKLHINYNN 127
Query: 84 ITMVRRDEFQNL-HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD-DIRG 141
+T + L +L + L NN+I+ + S GL L ++YL HNQL E + ++G
Sbjct: 128 LT----ESVGPLPKSLQDLQLANNKISKLGS-FDGLVNLTFIYLQHNQLKEEAVSASLKG 182
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGV-TNIFELKLQHNEIENL-DGALMGIHGLSR 199
LK L +DLS+N+++K G+ T++ L L +N+I N+ D GL
Sbjct: 183 LKSLEYLDLSFNQMSKLPA---------GLPTSLLTLYLDNNKITNIPDEYFNRFTGLQY 233
Query: 200 LDLSHNKLRTIS-PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
L LSHN+L P + + SL LD+S+N L ++ ++ LE ++ N L +
Sbjct: 234 LRLSHNELADSGVPGNSFNISSLLELDLSYNKLKSIPTVNEN----LENYYLEVNKLEKF 289
Query: 259 D-KDFHGLPVLCK--ADLAHNNIKAINI 283
D K F CK L+++ IK + +
Sbjct: 290 DVKSF------CKILGPLSYSKIKHLRL 311
Score = 158 (60.7 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 61/242 (25%), Positives = 113/242 (46%)
Query: 2 LTDLNWLFLNNNRLKS--LEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 58
+TDL WL L++N L++ ++G++ L +L+ L I N L + L L N
Sbjct: 89 VTDLQWLILDHNLLENSKIKGKVFSKLKQLKKLHINYNNLTESVGPLP--KSLQDLQLAN 146
Query: 59 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-EFQNLHNLDSISLQNNQITSMNSSLSG 117
N+I+ L G GL L + NQ+ + L +L+ + L NQ++ + + L
Sbjct: 147 NKISKL-GSFDGLVNLTFIYLQHNQLKEEAVSASLKGLKSLEYLDLSFNQMSKLPAGLP- 204
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
T L LYL +N++T + L+ + LS+N++ G N ++++ EL
Sbjct: 205 -TSLLTLYLDNNKITNIPDEYFNRFTGLQYLRLSHNELADSGVPGNSFN----ISSLLEL 259
Query: 178 KLQHNEI-------ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L +N++ ENL+ + ++ L + D+ + + + P + +K L + N
Sbjct: 260 DLSYNKLKSIPTVNENLENYYLEVNKLEKFDVK-SFCKILGP---LSYSKIKHLRLDGNP 315
Query: 231 LT 232
LT
Sbjct: 316 LT 317
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/189 (27%), Positives = 93/189 (49%)
Query: 1 GLTDLNWLFLNNNRLK--SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 58
GL +L +++L +N+LK ++ L L L+ L + NQ+ LP+ + + L +LY +N
Sbjct: 157 GLVNLTFIYLQHNQLKEEAVSASLKGLKSLEYLDLSFNQMSKLPAGLP--TSLLTLYLDN 214
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSL 115
N+IT++ D T LQ + N++ + V + F N+ +L + L N++ S+ +
Sbjct: 215 NKITNIPDEYFNRFTGLQYLRLSHNELADSGVPGNSF-NISSLLELDLSYNKLKSIPTVN 273
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
L Y YL N+L +F D++ ++ LSY+KI Q +++
Sbjct: 274 ENLEN--Y-YLEVNKLEKF---DVKSFCKILG-PLSYSKIKHLRLDGNPLTQSSLPPDMY 326
Query: 176 ELKLQHNEI 184
E NEI
Sbjct: 327 ECLRVANEI 335
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 205 (77.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 89/305 (29%), Positives = 135/305 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YA 56
GL L L L NN L+ + + L L LQ L ++ N++ ++P FS L SL +
Sbjct: 112 GLYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPPSC--FSGLHSLRHLWL 169
Query: 57 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS- 114
++N +T + R L+ LQ + N+I + F NL +L + L NN+I S+
Sbjct: 170 DDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKC 229
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
GL L L L++N L EF +R L L+ + N I + G ++
Sbjct: 230 FDGLHSLETLDLNYNNLDEFPTA-VRTLSNLKELGFHSNNIKSIPEK-----AFVGNPSL 283
Query: 175 FELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+ N I+ + A + L L L+ T PD G SL+ L ++ +++
Sbjct: 284 ITIHFYDNPIQLVGRSAFQHLPELRTLTLNGASQITEFPD-LTGTASLESLTLTGAQISS 342
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
L +T LP L+ L +S+N L L F L K DL HN I I T Q+
Sbjct: 343 LPQTVCDQLPNLQVLDLSYNLLEDLPS-FSVCQKLQKIDLRHNEIYEIQAD----TFQQL 397
Query: 294 FGLNS 298
F L S
Sbjct: 398 FSLRS 402
Score = 178 (67.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 78/320 (24%), Positives = 144/320 (45%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
L+ L + L N++ + + G LS L +L + N++ +L L +L N N
Sbjct: 185 LSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 244
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGL 118
+ +R L+ L+ N I + F +L +I +N I + S+ L
Sbjct: 245 NLDEFPTAVRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHL 304
Query: 119 TKLAYLYLSH-NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+L L L+ +Q+TEF D+ G L ++ L+ +I+ + + N+ L
Sbjct: 305 PELRTLTLNGASQITEF--PDLTGTASLESLTLTGAQISSLP-----QTVCDQLPNLQVL 357
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N +E+L + L ++DL HN++ I D F L SL+ L+++ N + ++
Sbjct: 358 DLSYNLLEDLPSFSV-CQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPN 416
Query: 238 SKTFLPALEELFVSHNSLTRLD-KDFHGLPVL-------CKADLAHNNIKAIN-IQLALK 288
+ + LP+L +L +S N L+ + HGL L ++ ++ N + I++
Sbjct: 417 AFSTLPSLRKLDLSSNRLSSIPVTGLHGLTHLKLTGNHALQSLISSENFPELKVIEMPYA 476
Query: 289 TQCQIFGLNSTLRIYLEGNP 308
QC FG+ +Y NP
Sbjct: 477 YQCCAFGVCEN--VYKISNP 494
Score = 173 (66.0 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 67/248 (27%), Positives = 115/248 (46%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L LPS++ +F+ L NN I+ L L L L+ + N +T + + F L+
Sbjct: 57 LSELPSNLSVFTSYLDLSMNN--ISQLPPSPLHSLRFLEELRLAGNALTYIPKGAFAGLY 114
Query: 97 NLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
+L + LQNN + + +L L L L L N+++ GL LR + L N +
Sbjct: 115 SLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNAL 174
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD 214
+ + + ++ + + L N+I ++ D A + L L L +N++ ++
Sbjct: 175 TEIPVQ-----AFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKC 229
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEEL-FVSHNSLTRLDKDFHGLPVLCKADL 273
F GL SL+ LD+++N L +T L L+EL F S+N + +K F G P L
Sbjct: 230 FDGLHSLETLDLNYNNLDEFPTAVRT-LSNLKELGFHSNNIKSIPEKAFVGNPSLITIHF 288
Query: 274 AHNNIKAI 281
N I+ +
Sbjct: 289 YDNPIQLV 296
Score = 147 (56.8 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 67/251 (26%), Positives = 121/251 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS-QLGSLYANNN 59
GL L L LN N L + TLS L+ L N ++++P + + L +++ +N
Sbjct: 232 GLHSLETLDLNYNNLDEFPTAVRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDN 291
Query: 60 RITSLD-GLLRGLTKLQVFNMD-FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
I + + L +L+ ++ +QIT + +L+S++L QI+S+ ++
Sbjct: 292 PIQLVGRSAFQHLPELRTLTLNGASQITEF--PDLTGTASLESLTLTGAQISSLPQTVCD 349
Query: 118 -LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L LS+N L + L ++L+ +DL +N+I + + Q + ++
Sbjct: 350 QLPNLQVLDLSYNLLED--LPSFSVCQKLQKIDLRHNEIYEIQA-----DTFQQLFSLRS 402
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I +D A + L +LDLS N+L +I GL LK+ +H L + +
Sbjct: 403 LNLAWNKIAIIDPNAFSTLPSLRKLDLSSNRLSSIPVTGLHGLTHLKLTG-NHALQSLI- 460
Query: 236 ETSKTFLPALE 246
+S+ F P L+
Sbjct: 461 -SSENF-PELK 469
Score = 139 (54.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 58/230 (25%), Positives = 105/230 (45%)
Query: 60 RITSLD-GLLRGLTKLQVF----NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NS 113
R+ D GL + L VF ++ N I+ + +L L+ + L N +T +
Sbjct: 49 RVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLPPSPLHSLRFLEELRLAGNALTYIPKG 108
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
+ +GL L L L +N L + + ++ L+ L+++ L N+I+ + G+ +
Sbjct: 109 AFAGLYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPP-----SCFSGLHS 163
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLL 231
+ L L N + + A + L + L+ NK+ I PD G L SL +L + +N +
Sbjct: 164 LRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHI-PDYAFGNLSSLVVLHLHNNRI 222
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+L + L +LE L +++N+L L L + NNIK+I
Sbjct: 223 HSLGKKCFDGLHSLETLDLNYNNLDEFPTAVRTLSNLKELGFHSNNIKSI 272
>UNIPROTKB|E2R423 [details] [associations]
symbol:KERA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061303 "cornea development in camera-type
eye" evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0061303
GeneTree:ENSGT00600000084286 CTD:11081 KO:K08123 OMA:RWINLNK
EMBL:AAEX03009927 RefSeq:XP_852485.1 Ensembl:ENSCAFT00000009924
GeneID:482598 KEGG:cfa:482598 NextBio:20857165 Uniprot:E2R423
Length = 350
Score = 197 (74.4 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 56/215 (26%), Positives = 107/215 (49%)
Query: 3 TDLNWLFLNNNRLKSL---EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L W+ LN N++ + +G L L KL L +E N+LE +PS + L L N
Sbjct: 95 TQLRWINLNKNKITNYGIEKGALSQLKKLLFLFLEDNELEEVPSPLP--RSLEQLQLARN 152
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
+++ + G L L + ++ N++ +RD F+ L NL +++ N + +M L
Sbjct: 153 KVSRIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLP 212
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
T L+L +N + + + ++ + L++NK++ G + G + V++I +
Sbjct: 213 ANTM--QLFLDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFD----VSSILD 266
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
L+L HN++ + + H L L L HNK++ ++
Sbjct: 267 LQLSHNQLTKVPR--ISAH-LQHLHLDHNKIKNVN 298
Score = 186 (70.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 73/290 (25%), Positives = 135/290 (46%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITM--V 87
L E L+ +P + S++ LY NN I ++ + T+L+ N++ N+IT +
Sbjct: 56 LYCENRGLKEIPP---IPSRIWYLYLENNLIETIPEKPFENATQLRWINLNKNKITNYGI 112
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
+ L L + L++N++ + S L L L L+ N+++ L+ L
Sbjct: 113 EKGALSQLKKLLFLFLEDNELEEVPSPLP--RSLEQLQLARNKVSRIPQGTFSNLENLTL 170
Query: 148 VDLSYNKI--NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+DL +NK+ N F ++ +G+ N+ +L + N + N+ L +L L +N
Sbjct: 171 LDLQHNKLLDNAFQ-----RDTFKGLKNLMQLNMAKNALRNMPPRLPA--NTMQLFLDNN 223
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF-LPALEELFVSHNSLTRLDKDFHG 264
+ I + F + + L ++HN L+ S F + ++ +L +SHN LT++ +
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFDVSSILDLQLSHNQLTKVPRISAH 283
Query: 265 LPVLCKADLAHNNIKAINIQLA----LKTQCQIFGLNSTLR-IYLEGNPV 309
L L L HN IK +N+ + L + FG LR + L+GN +
Sbjct: 284 LQHL---HLDHNKIKNVNVSVICPPILPAEQDSFGYGPHLRYLRLDGNEI 330
Score = 169 (64.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 71/270 (26%), Positives = 119/270 (44%)
Query: 8 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD- 65
L+ N LK + S++ L +E N +E +P + +QL + N N+IT+
Sbjct: 56 LYCENRGLKEIPP---IPSRIWYLYLENNLIETIPEKPFENATQLRWINLNKNKITNYGI 112
Query: 66 --GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLA 122
G L L KL ++ N++ V ++L L L N+++ + + S L L
Sbjct: 113 EKGALSQLKKLLFLFLEDNELEEVPSPLPRSLEQLQ---LARNKVSRIPQGTFSNLENLT 169
Query: 123 YLYLSHNQLTE--FLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L HN+L + F D +GLK L ++++ N + R N +L L
Sbjct: 170 LLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLPA--------NTMQLFLD 221
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTIS-PDDFIGLDSLKMLDISHNLLTTLEETS 238
+N IE + + I ++ L L+HNKL P + S+ L +SHN LT + S
Sbjct: 222 NNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFDVSSILDLQLSHNQLTKVPRIS 281
Query: 239 KTFLPALEELFVSHNSLTRLDKDFHGLPVL 268
L+ L + HN + ++ P+L
Sbjct: 282 AH----LQHLHLDHNKIKNVNVSVICPPIL 307
Score = 150 (57.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 60/239 (25%), Positives = 111/239 (46%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
+LY N + + + + L + N N I + F+N L I+L N+IT+
Sbjct: 55 ALYCENRGLKEIPPIPSRIWYLYLEN---NLIETIPEKPFENATQLRWINLNKNKITNYG 111
Query: 113 ---SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
+LS L KL +L+L N+L E R L++L+ L+ NK+++ +
Sbjct: 112 IEKGALSQLKKLLFLFLEDNELEEVPSPLPRSLEQLQ---LARNKVSRIP-----QGTFS 163
Query: 170 GVTNIFELKLQHNEIENLDGALM-----GIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
+ N+ L LQHN++ LD A G+ L +L+++ N LR + P + +++++
Sbjct: 164 NLENLTLLDLQHNKL--LDNAFQRDTFKGLKNLMQLNMAKNALRNMPPR--LPANTMQLF 219
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADL--AHNNIKAI 281
+ +N + + E +P + L ++HN L+ G V DL +HN + +
Sbjct: 220 -LDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSSGFDVSSILDLQLSHNQLTKV 277
>DICTYBASE|DDB_G0288183 [details] [associations]
symbol:roco9 "LRRK family protein kinase Roco9"
species:44689 "Dictyostelium discoideum" [GO:0016791 "phosphatase
activity" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016311 "dephosphorylation" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000198
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR008271
InterPro:IPR008936 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR017906 Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50238 PROSITE:PS51450 SMART:SM00324
dictyBase:DDB_G0288183 GO:GO:0005524 GO:GO:0007165 GO:GO:0005096
GO:GO:0043547 Gene3D:1.10.555.10 SUPFAM:SSF48350 SUPFAM:SSF56112
HSSP:P15056 GO:GO:0004674 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GenomeReviews:CM000154_GR GO:GO:0005622 GO:GO:0016791
EMBL:AAFI02000109 EMBL:AY232271 RefSeq:XP_636835.1
ProteinModelPortal:Q6XHA7 EnsemblProtists:DDB0191512 GeneID:8626504
KEGG:ddi:DDB_G0288183 OMA:TCELLTE Uniprot:Q6XHA7
Length = 3365
Score = 211 (79.3 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 84/300 (28%), Positives = 144/300 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQL----GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 57
L++L L+L +NR+KS+ L G+ KLQ + N LE+L I S L L +
Sbjct: 1549 LSNLTHLWLQDNRIKSIPSSLLKLIGSKLKLQEFDLSHNLLESLHKSIYTLSTLTKLVLD 1608
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
NN++ + + + +L+ ++ N+++ + L+ + +QNNQI +
Sbjct: 1609 NNKLIIIPESISKMKQLKCLSVQNNRLSSFPQ-ALSLCVGLEELYVQNNQIRELPLGFFK 1667
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN-IFE 176
L L L L +NQ+T+F K + D S +N+ G N +Q ++N +FE
Sbjct: 1668 LGSLRMLDLRNNQITKF--------KCHKLDDKSCFLMNEIIHFRMGPNPLQKLSNQMFE 1719
Query: 177 LK-LQHNEIENLDGA------LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
++ L H E+ + L + L L L+ NKL IS D F L L +LD+S N
Sbjct: 1720 MRSLIHLELTGCSLSTVPLKLLDNLVNLEALYLNQNKLSEISID-FKRLFKLSVLDLSDN 1778
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALK 288
T + LP+L++L++ +N L + DF+ LP+L + L N + ++ + K
Sbjct: 1779 QFTNVP--IHAMLPSLKKLYLHNNQLYNISFNDFN-LPLLSELRLDGNKLTYVSPSIGTK 1835
Score = 192 (72.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 74/281 (26%), Positives = 130/281 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFS---QLGSLYAN 57
LT LN L+ N + ++ LS L L ++ N+++++PS + +L +L +
Sbjct: 1529 LTKLN---LSRNYFNTFPIEIILLSNLTHLWLQDNRIKSIPSSLLKLIGSKLKLQEFDLS 1585
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+N + SL + L+ L +D N++ ++ + + L +S+QNN+++S +LS
Sbjct: 1586 HNLLESLHKSIYTLSTLTKLVLDNNKLIIIP-ESISKMKQLKCLSVQNNRLSSFPQALSL 1644
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L LY+ +NQ+ E L + L LR +DL N+I KF + I
Sbjct: 1645 CVGLEELYVQNNQIRELPLGFFK-LGSLRMLDLRNNQITKFKCHKLDDKSCFLMNEIIHF 1703
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
++ N ++ L + + L L+L+ L T+ L +L+ L ++ N L+ +
Sbjct: 1704 RMGPNPLQKLSNQMFEMRSLIHLELTGCSLSTVPLKLLDNLVNLEALYLNQNKLSEISID 1763
Query: 238 SKTFLPALEELFVSHNSLTRLDKDFHG-LPVLCKADLAHNN 277
K L L +S N T + H LP L K L HNN
Sbjct: 1764 FKRLFK-LSVLDLSDNQFTNVP--IHAMLPSLKKLYL-HNN 1800
Score = 165 (63.1 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 75/298 (25%), Positives = 137/298 (45%)
Query: 9 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 68
FL+ +R +L TL+KL L +N P +I L S L L+ +NRI S+ L
Sbjct: 1515 FLSIDR--NLLSYFSTLTKLNL---SRNYFNTFPIEIILLSNLTHLWLQDNRIKSIPSSL 1569
Query: 69 RGLT----KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
L KLQ F++ N + + + + L L + L NN++ + S+S + +L L
Sbjct: 1570 LKLIGSKLKLQEFDLSHNLLESLHKSIY-TLSTLTKLVLDNNKLIIIPESISKMKQLKCL 1628
Query: 125 YLSHNQLTEF--LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
+ +N+L+ F L GL+ L + ++ G G ++ + N K + +
Sbjct: 1629 SVQNNRLSSFPQALSLCVGLEELYVQNNQIREL-PLGFFKLGSLRMLDLRNNQITKFKCH 1687
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
++++ LM + + + N L+ +S F + SL L+++ L+T+ L
Sbjct: 1688 KLDDKSCFLM--NEIIHFRMGPNPLQKLSNQMF-EMRSLIHLELTGCSLSTVPLKLLDNL 1744
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTL 300
LE L+++ N L+ + DF L L DL+ N + I L + +++ N+ L
Sbjct: 1745 VNLEALYLNQNKLSEISIDFKRLFKLSVLDLSDNQFTNVPIHAMLPSLKKLYLHNNQL 1802
Score = 163 (62.4 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 71/286 (24%), Positives = 133/286 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L+ L L L+NN+L + + + +L+ L ++ N+L + P + L L LY NN+I
Sbjct: 1599 LSTLTKLVLDNNKLIIIPESISKMKQLKCLSVQNNRLSSFPQALSLCVGLEELYVQNNQI 1658
Query: 62 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQN-----LHNLDSISLQNNQITSMNSSL 115
L G + L L++ ++ NQIT + + + ++ + + N + +++ +
Sbjct: 1659 RELPLGFFK-LGSLRMLDLRNNQITKFKCHKLDDKSCFLMNEIIHFRMGPNPLQKLSNQM 1717
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+ L +L L+ L+ L + L L + L+ NK+++ + + +
Sbjct: 1718 FEMRSLIHLELTGCSLSTVPLKLLDNLVNLEALYLNQNKLSEISI------DFKRLFKLS 1771
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+ N+ M + L +L L +N+L IS +DF L L L + N LT +
Sbjct: 1772 VLDLSDNQFTNVPIHAM-LPSLKKLYLHNNQLYNISFNDF-NLPLLSELRLDGNKLTYVS 1829
Query: 236 ETSKTFLPALEELFVSHN-SLTRLDKDFHGLPVL--CKADLAHNNI 278
+ T L +L L + N +T L H L +L K+ + ++NI
Sbjct: 1830 PSIGTKLLSLTLLNLDRNPQITTLP---HTLALLKKLKSLIVNSNI 1872
>TAIR|locus:2011339 [details] [associations]
symbol:AT1G35710 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0004713 "protein tyrosine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0009814
"defense response, incompatible interaction" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003591 SMART:SM00369
Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0004713 EMBL:AC021198
HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263 HSSP:P25146
EMBL:AK319165 EMBL:FJ708647 EMBL:AY042808 IPI:IPI00538994
IPI:IPI00954379 IPI:IPI00954382 PIR:B86479 RefSeq:NP_174809.1
UniGene:At.15433 UniGene:At.74997 ProteinModelPortal:Q9LP24
SMR:Q9LP24 STRING:Q9LP24 PaxDb:Q9LP24 PRIDE:Q9LP24
EnsemblPlants:AT1G35710.1 GeneID:840475 KEGG:ath:AT1G35710
GeneFarm:669 TAIR:At1g35710 InParanoid:Q9LP24 OMA:GNMESMT
PhylomeDB:Q9LP24 ProtClustDB:CLSN2914378 Uniprot:Q9LP24
Length = 1120
Score = 206 (77.6 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 70/259 (27%), Positives = 124/259 (47%)
Query: 2 LTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNN 59
L+ L + L+ N L + LG L L +L + QN L + +PS++ + L + N
Sbjct: 125 LSKLIYFDLSTNHLTGEISPSLGNLKNLTVLYLHQNYLTSVIPSELGNMESMTDLALSQN 184
Query: 60 RIT-SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSLSG 117
++T S+ L L L V + N +T V E N+ ++ ++L N++T S+ S+L
Sbjct: 185 KLTGSIPSSLGNLKNLMVLYLYENYLTGVIPPELGNMESMTDLALSQNKLTGSIPSTLGN 244
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L L LYL N LT + +I ++ + + LS NK+ G+ ++ +T + L
Sbjct: 245 LKNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKLT--GSIPSSLGNLKNLT-LLSL 301
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
Q+ + L I + L+LS+NKL P L +L +L + N LT +
Sbjct: 302 -FQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPP 360
Query: 238 SKTFLPALEELFVSHNSLT 256
+ ++ +L +++N LT
Sbjct: 361 ELGNMESMIDLQLNNNKLT 379
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 69/247 (27%), Positives = 114/247 (46%)
Query: 9 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRIT-SLDG 66
FL N + G L + N+ + S+ + +LG+L +NN IT ++
Sbjct: 517 FLGNKFTGDIFEAFGIYPDLNFIDFSHNKFHGEISSNWEKSPKLGALIMSNNNITGAIPT 576
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLY 125
+ +T+L ++ N + + NL NL + L NQ++ + + LS LT L L
Sbjct: 577 EIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGNQLSGRVPAGLSFLTNLESLD 636
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIE 185
LS N + + +L ++LS NK + R + +T + +L L HN+++
Sbjct: 637 LSSNNFSSEIPQTFDSFLKLHDMNLSRNKFDGSIPR------LSKLTQLTQLDLSHNQLD 690
Query: 186 N-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT-TLEETS---KT 240
+ L + L +LDLSHN L + P F G+ +L +DIS+N L L +T K
Sbjct: 691 GEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDISNNKLEGPLPDTPTFRKA 750
Query: 241 FLPALEE 247
ALEE
Sbjct: 751 TADALEE 757
Score = 183 (69.5 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 69/274 (25%), Positives = 122/274 (44%)
Query: 8 LFLNNNRLK-SLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRIT-SL 64
L L+ N+L S+ LG L L LL + QN L +P + + L +NN++T S+
Sbjct: 275 LALSQNKLTGSIPSSLGNLKNLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSI 334
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSLSGLTKLAY 123
L L L + + N +T V E N+ ++ + L NN++T S+ SS L L Y
Sbjct: 335 PSSLGNLKNLTILYLYENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTY 394
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
LYL N LT + ++ ++ + +DLS NK+ G+ + + +++ L++ H
Sbjct: 395 LYLYLNYLTGVIPQELGNMESMINLDLSQNKLT--GSVPDSFGNFTKLESLY-LRVNHLS 451
Query: 184 IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT-TLEETSKTFL 242
G H L+ L L N P+ L+ + + +N L + ++ +
Sbjct: 452 GAIPPGVANSSH-LTTLILDTNNFTGFFPETVCKGRKLQNISLDYNHLEGPIPKSLRDCK 510
Query: 243 PALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
+ F+ + + + F P L D +HN
Sbjct: 511 SLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHN 544
Score = 170 (64.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 73/286 (25%), Positives = 124/286 (43%)
Query: 3 TDLNWLFLNNNRLK-SLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNR 60
T L L+L N L ++ + S L L+++ N P + +L ++ + N
Sbjct: 438 TKLESLYLRVNHLSGAIPPGVANSSHLTTLILDTNNFTGFFPETVCKGRKLQNISLDYNH 497
Query: 61 ITS-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGL 118
+ + LR L N+ T + F +L+ I +N+ ++S+
Sbjct: 498 LEGPIPKSLRDCKSLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHNKFHGEISSNWEKS 557
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
KL L +S+N +T + +I + +L +DLS N N FG E + +TN+ L+
Sbjct: 558 PKLGALIMSNNNITGAIPTEIWNMTQLVELDLSTN--NLFGELPEA---IGNLTNLSRLR 612
Query: 179 LQHNEIEN-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT-TLEE 236
L N++ + L + L LDLS N + P F L +++S N ++
Sbjct: 613 LNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRNKFDGSIPR 672
Query: 237 TSKTFLPALEELFVSHNSLT-RLDKDFHGLPVLCKADLAHNNIKAI 281
SK L L +L +SHN L + L L K DL+HNN+ +
Sbjct: 673 LSK--LTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGL 716
Score = 168 (64.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 55/184 (29%), Positives = 85/184 (46%)
Query: 73 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ-NNQITSMNSSLSGLTKLAYLYLSHNQL 131
KL M N IT E N+ L + L NN + ++ LT L+ L L+ NQL
Sbjct: 559 KLGALIMSNNNITGAIPTEIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGNQL 618
Query: 132 TEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGAL 191
+ + + L L ++DLS N + +E + ++ L N+ + L
Sbjct: 619 SGRVPAGLSFLTNLESLDLSSNNFS-----SEIPQTFDSFLKLHDMNLSRNKFDGSIPRL 673
Query: 192 MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVS 251
+ L++LDLSHN+L P L SL LD+SHN L+ L T+ + AL + +S
Sbjct: 674 SKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDIS 733
Query: 252 HNSL 255
+N L
Sbjct: 734 NNKL 737
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 79/333 (23%), Positives = 139/333 (41%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNN 59
L +L +L+L N L + Q LG + + L + QN+L ++P F++L SLY N
Sbjct: 389 LKNLTYLYLYLNYLTGVIPQELGNMESMINLDLSQNKLTGSVPDSFGNFTKLESLYLRVN 448
Query: 60 RIT-SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSG 117
++ ++ + + L +D N T + L +ISL N + + SL
Sbjct: 449 HLSGAIPPGVANSSHLTTLILDTNNFTGFFPETVCKGRKLQNISLDYNHLEGPIPKSLRD 508
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L N+ T + + L +D S+NK + + N K+ G L
Sbjct: 509 CKSLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHNKFHGEISSNWEKSPKLGA-----L 563
Query: 178 KLQHNEIEN-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
+ +N I + + + L LDLS N L P+ L +L L ++ N L+
Sbjct: 564 IMSNNNITGAIPTEIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGNQLSGRVP 623
Query: 237 TSKTFLPALEELFVSHNSLT-RLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFG 295
+FL LE L +S N+ + + + F L +L+ N +L+ TQ
Sbjct: 624 AGLSFLTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRNKFDGSIPRLSKLTQLTQLD 683
Query: 296 LNSTLRIYLEGNPVLCDDSMRAVIDAMETINNN 328
L+ L+G S+++ +D ++ +NN
Sbjct: 684 LSHN---QLDGEIPSQLSSLQS-LDKLDLSHNN 712
>TAIR|locus:2094613 [details] [associations]
symbol:RLP38 "receptor like protein 38" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263
EMBL:AB026655 HOGENOM:HOG000116562 IPI:IPI00522339
RefSeq:NP_188953.1 UniGene:At.65133 ProteinModelPortal:Q9LS79
SMR:Q9LS79 EnsemblPlants:AT3G23120.1 GeneID:821887
KEGG:ath:AT3G23120 TAIR:At3g23120 InParanoid:Q9LS79 OMA:YARNTSS
PhylomeDB:Q9LS79 ProtClustDB:CLSN2684197 Genevestigator:Q9LS79
Uniprot:Q9LS79
Length = 784
Score = 204 (76.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 81/298 (27%), Positives = 128/298 (42%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSL-YANNNRIT 62
L +L + LKS L L L L + L+ +PS I+ S L L + N+ +
Sbjct: 90 LYFLSTASTSLKS-SSALFKLQHLTHLDLSNCNLQGEIPSSIENLSHLTHLDLSTNHLVG 148
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
+ + L +L+ ++ N + F NL L + L N T + LS LT LA
Sbjct: 149 EVPASIGNLNQLEYIDLRGNHLRGNIPTSFANLTKLSLLDLHENNFTGGDIVLSNLTSLA 208
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L LS N F D+ GL L + + N F + ++++ +++L N
Sbjct: 209 ILDLSSNHFKSFFSADLSGLHNLEQI---FGNENSFVGLFPAS--LLKISSLDKIQLSQN 263
Query: 183 EIEN-LD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKT 240
+ E +D G L+ LD+SHN P L +L++LD+SHN L S +
Sbjct: 264 QFEGPIDFGNTSSSSRLTMLDISHNNFIGRVPSSLSKLVNLELLDLSHNNFRGLSPRSIS 323
Query: 241 FLPALEELFVSHNSLTRLDKDFHGLPV-LCKADLAHNNIKAINIQLALKTQCQIFGLN 297
L L L +S+N L F P L DL+HN+ + + + ++ GLN
Sbjct: 324 KLVNLTSLDISYNKLEGQVPYFIWKPSNLQSVDLSHNSFFDLGKSVEVVNGAKLVGLN 381
>UNIPROTKB|F1S6B5 [details] [associations]
symbol:FMOD "Fibromodulin" species:9823 "Sus scrofa"
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GO:GO:0031012 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00600000084286 OMA:AQYDEDP
PANTHER:PTHR24371:SF11 EMBL:CU657939 Ensembl:ENSSSCT00000016639
ArrayExpress:F1S6B5 Uniprot:F1S6B5
Length = 379
Score = 198 (74.8 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 73/263 (27%), Positives = 131/263 (49%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNR 60
+ +++ NN++ S+ EG + L + + NQ+ + ++FS+L L Y ++N
Sbjct: 110 MKYVYFQNNQISSIQEGVFDNATGLLWIALHGNQITSDKVGKKVFSKLRHLERLYLDHNN 169
Query: 61 ITSLDGLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
+T + G L R L +L ++D NQI+ V + + L NL ++ LQ+N+I + SS+ GL
Sbjct: 170 LTRMPGPLPRSLREL---HLDHNQISRVPNNALEGLENLTALYLQHNEIQEVGSSMRGLR 226
Query: 120 KLAYLYLSHNQLTEFLLDDIRGL-KRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L LS+N L + + D GL L + L +N N + + + +G + ++
Sbjct: 227 SLILLDLSYNHLRK--VPD--GLPSALEQLYLEHN--NVYSVPD---SYFRGSPKLLYVR 277
Query: 179 LQHNEIEN--LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
L HN + N L L LDLS+N+L+ I P + +L+ L + N + E
Sbjct: 278 LSHNSLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVN----TNLENLYLQGNRIN--EF 331
Query: 237 TSKTFLPALEELFVSHNSLTRLD 259
+ +F ++ + S + RLD
Sbjct: 332 SISSFCTVVDVMNFSKLQVLRLD 354
Score = 185 (70.2 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 75/242 (30%), Positives = 120/242 (49%)
Query: 101 ISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ QNNQI+S+ + T L ++ L NQ+T + + +LR ++ Y N
Sbjct: 113 VYFQNNQISSIQEGVFDNATGLLWIALHGNQITSDKVGK-KVFSKLRHLERLYLDHNNL- 170
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
TR G ++ EL L HN+I + + AL G+ L+ L L HN+++ + GL
Sbjct: 171 TRMPGPLP----RSLRELHLDHNQISRVPNNALEGLENLTALYLQHNEIQEVG-SSMRGL 225
Query: 219 DSLKMLDISHNLLTTLEETSKTFLP-ALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHN 276
SL +LD+S+N L + + LP ALE+L++ HN++ + D F G P L L+HN
Sbjct: 226 RSLILLDLSYNHLRKVPDG----LPSALEQLYLEHNNVYSVPDSYFRGSPKLLYVRLSHN 281
Query: 277 NIK----AIN-------IQLALK-TQCQ-IFGLNSTLR-IYLEGNPV--LCDDSMRAVID 320
++ A N ++L L Q Q I +N+ L +YL+GN + S V+D
Sbjct: 282 SLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVNTNLENLYLQGNRINEFSISSFCTVVD 341
Query: 321 AM 322
M
Sbjct: 342 VM 343
Score = 168 (64.2 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 56/186 (30%), Positives = 92/186 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNR 60
L L L+L++N L + G L L+ L ++ NQ+ +P++ ++ L +LY +N
Sbjct: 157 LRHLERLYLDHNNLTRMPGPLPR--SLRELHLDHNQISRVPNNALEGLENLTALYLQHNE 214
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLT 119
I + +RGL L + ++ +N + V D + L+ + L++N + S+ +S G
Sbjct: 215 IQEVGSSMRGLRSLILLDLSYNHLRKVP-DGLPSA--LEQLYLEHNNVYSVPDSYFRGSP 271
Query: 120 KLAYLYLSHNQLTEF-LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
KL Y+ LSHN LT L + L +DLSYN++ K N TN+ L
Sbjct: 272 KLLYVRLSHNSLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVN---------TNLENLY 322
Query: 179 LQHNEI 184
LQ N I
Sbjct: 323 LQGNRI 328
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 59/248 (23%), Positives = 110/248 (44%)
Query: 3 TDLNWLFLNNNRLKSLE-GQ--LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L W+ L+ N++ S + G+ L L+ L ++ N L +P + L L+ ++N
Sbjct: 132 TGLLWIALHGNQITSDKVGKKVFSKLRHLERLYLDHNNLTRMPGPLP--RSLRELHLDHN 189
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+I+ + + L GL L + N+I V + L +L + L N + + L
Sbjct: 190 QISRVPNNALEGLENLTALYLQHNEIQEVG-SSMRGLRSLILLDLSYNHLRKVPDGLP-- 246
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+ L LYL HN + RG +L V LS+N + G + N +++ EL
Sbjct: 247 SALEQLYLEHNNVYSVPDSYFRGSPKLLYVRLSHNSLTNNGLASNTFNS----SSLLELD 302
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE--E 236
L +N+++ + L L L N++ S F + + +++ S + L+ E
Sbjct: 303 LSYNQLQKIPPVNTN---LENLYLQGNRINEFSISSFCTV--VDVMNFSKLQVLRLDGNE 357
Query: 237 TSKTFLPA 244
++ +PA
Sbjct: 358 IKRSAMPA 365
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
GL +L L+L +N ++ + + L L LL + N L +P + S L LY +N
Sbjct: 201 GLENLTALYLQHNEIQEVGSSMRGLRSLILLDLSYNHLRKVPDGLP--SALEQLYLEHNN 258
Query: 61 ITSL-DGLLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
+ S+ D RG KL + N +T + + F N +L + L NQ+ + ++
Sbjct: 259 VYSVPDSYFRGSPKLLYVRLSHNSLTNNGLASNTF-NSSSLLELDLSYNQLQKI-PPVN- 315
Query: 118 LTKLAYLYLSHNQLTEFLLD------DIRGLKRLRTVDLSYNKINK 157
T L LYL N++ EF + D+ +L+ + L N+I +
Sbjct: 316 -TNLENLYLQGNRINEFSISSFCTVVDVMNFSKLQVLRLDGNEIKR 360
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 44/167 (26%), Positives = 81/167 (48%)
Query: 119 TKLAYLYLSHNQLT---EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+++ Y+Y +NQ++ E + D+ GL + L N+I + GK + ++
Sbjct: 108 SRMKYVYFQNNQISSIQEGVFDNATGLL---WIALHGNQIT---SDKVGKKVFSKLRHLE 161
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L HN + + G L L L L HN++ + + GL++L L + HN + +
Sbjct: 162 RLYLDHNNLTRMPGPLP--RSLRELHLDHNQISRVPNNALEGLENLTALYLQHNEIQEVG 219
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLP-VLCKADLAHNNIKAI 281
+ + L +L L +S+N L ++ GLP L + L HNN+ ++
Sbjct: 220 SSMRG-LRSLILLDLSYNHLRKVPD---GLPSALEQLYLEHNNVYSV 262
>TAIR|locus:2156349 [details] [associations]
symbol:GSO2 "GASSHO 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0008544 "epidermis development"
evidence=IGI] [GO:0009790 "embryo development" evidence=IGI]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0009790
HSSP:P36897 GO:GO:0009553 GO:GO:0008544 InterPro:IPR025875
Pfam:PF12799 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
ProtClustDB:CLSN2687271 EMBL:AB016874 IPI:IPI00520102
RefSeq:NP_199283.1 UniGene:At.7718 ProteinModelPortal:Q9FIZ3
SMR:Q9FIZ3 PaxDb:Q9FIZ3 PRIDE:Q9FIZ3 EnsemblPlants:AT5G44700.1
GeneID:834499 KEGG:ath:AT5G44700 GeneFarm:664 TAIR:At5g44700
InParanoid:Q9FIZ3 OMA:PRINEMA PhylomeDB:Q9FIZ3 ArrayExpress:Q9FIZ3
Uniprot:Q9FIZ3
Length = 1252
Score = 206 (77.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 81/285 (28%), Positives = 129/285 (45%)
Query: 2 LTDLNWLFLNNNRLK-SLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNN 59
L +L L L +N L ++ G L LQ+L + +L L PS QL +L +N
Sbjct: 143 LVNLKSLKLGDNELNGTIPETFGNLVNLQMLALASCRLTGLIPSRFGRLVQLQTLILQDN 202
Query: 60 RITS-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSG 117
+ + + T L +F FN++ E L NL +++L +N + + S L
Sbjct: 203 ELEGPIPAEIGNCTSLALFAAAFNRLNGSLPAELNRLKNLQTLNLGDNSFSGEIPSQLGD 262
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L + YL L NQL + + L L+T+DLS N + G +E + + + L
Sbjct: 263 LVSIQYLNLIGNQLQGLIPKRLTELANLQTLDLSSNNLT--GVIHE---EFWRMNQLEFL 317
Query: 178 KLQHNEIE-NLDGALMGIH-GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L N + +L + + L +L LS +L P + SLK+LD+S+N LT
Sbjct: 318 VLAKNRLSGSLPKTICSNNTSLKQLFLSETQLSGEIPAEISNCQSLKLLDLSNNTLTGQI 377
Query: 236 ETSKTFLPALEELFVSHNSLT-RLDKDFHGLPVLCKADLAHNNIK 279
S L L L++++NSL L L L + L HNN++
Sbjct: 378 PDSLFQLVELTNLYLNNNSLEGTLSSSISNLTNLQEFTLYHNNLE 422
Score = 197 (74.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 88/334 (26%), Positives = 157/334 (47%)
Query: 2 LTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSL--YAN 57
LT+L L +N L+ + ++G L KL+++ + +N+ +P +I ++L + Y N
Sbjct: 408 LTNLQEFTLYHNNLEGKVPKEIGFLGKLEIMYLYENRFSGEMPVEIGNCTRLQEIDWYGN 467
Query: 58 --NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSS 114
+ I S G L+ LT+L + N++ N H + I L +NQ++ S+ SS
Sbjct: 468 RLSGEIPSSIGRLKDLTRLHLRE---NELVGNIPASLGNCHQMTVIDLADNQLSGSIPSS 524
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
LT L + +N L L D + LK L ++ S NK N G+ + + G ++
Sbjct: 525 FGFLTALELFMIYNNSLQGNLPDSLINLKNLTRINFSSNKFN--GSISP----LCGSSSY 578
Query: 175 FELKLQHNEIE-NLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+ N E ++ L L RL L N+ P F + L +LDIS N L+
Sbjct: 579 LSFDVTENGFEGDIPLELGKSTNLDRLRLGKNQFTGRIPRTFGKISELSLLDISRNSLSG 638
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKDFHG-LPVLCKADLAHNNIKAINIQLALKTQCQ 292
+ L + +++N L+ + + G LP+L + L+ N K + +L T+
Sbjct: 639 IIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSN--KFVG---SLPTE-- 691
Query: 293 IFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETIN 326
IF L + L ++L+GN + + S+ I ++ +N
Sbjct: 692 IFSLTNILTLFLDGNSL--NGSIPQEIGNLQALN 723
Score = 166 (63.5 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 64/260 (24%), Positives = 123/260 (47%)
Query: 2 LTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLE-ALPSDI-QLFSQLGSLYANN 58
L +L L L++N L + + +++L+ LV+ +N+L +LP I + L L+ +
Sbjct: 287 LANLQTLDLSSNNLTGVIHEEFWRMNQLEFLVLAKNRLSGSLPKTICSNNTSLKQLFLSE 346
Query: 59 NRITS-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSLS 116
+++ + + L++ ++ N +T D L L ++ L NN + +++SS+S
Sbjct: 347 TQLSGEIPAEISNCQSLKLLDLSNNTLTGQIPDSLFQLVELTNLYLNNNSLEGTLSSSIS 406
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
LT L L HN L + +I L +L ++ Y N+F E ++ T + E
Sbjct: 407 NLTNLQEFTLYHNNLEGKVPKEIGFLGKL---EIMYLYENRFS--GEMPVEIGNCTRLQE 461
Query: 177 LKLQHNEIEN-LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ N + + ++ + L+RL L N+L P + ++D++ N L+
Sbjct: 462 IDWYGNRLSGEIPSSIGRLKDLTRLHLRENELVGNIPASLGNCHQMTVIDLADNQLSGSI 521
Query: 236 ETSKTFLPALEELFVSHNSL 255
+S FL ALE + +NSL
Sbjct: 522 PSSFGFLTALELFMIYNNSL 541
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 79/300 (26%), Positives = 133/300 (44%)
Query: 21 QLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK-LQVFN 78
+LG + L L + +NQ +P S+L L + N ++ + + GL K L +
Sbjct: 595 ELGKSTNLDRLRLGKNQFTGRIPRTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHID 654
Query: 79 MDFNQITMVRRDEFQNLHNLDSISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 137
++ N ++ V L L + L +N+ + S+ + + LT + L+L N L +
Sbjct: 655 LNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQ 714
Query: 138 DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHG 196
+I L+ L ++L N+++ GK ++ +FEL+L N + +G +
Sbjct: 715 EIGNLQALNALNLEENQLSGPLPSTIGK-----LSKLFELRLSRNALTGEIPVEIGQLQD 769
Query: 197 L-SRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
L S LDLS+N P L L+ LD+SHN L + +L L +S+N+L
Sbjct: 770 LQSALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNL 829
Query: 256 T-RLDKDFH--------GLPVLCKADLAHNNIKAINIQLAL--KTQCQIFGLNSTLRIYL 304
+L K F G LC + L+H N Q +L KT I ++S I L
Sbjct: 830 EGKLKKQFSRWQADAFVGNAGLCGSPLSHCNRAGSKNQRSLSPKTVVIISAISSLAAIAL 889
Score = 133 (51.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 47/156 (30%), Positives = 79/156 (50%)
Query: 5 LNWLFLNNNR-LKSLEGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNNRIT 62
L L L++N+ + SL ++ +L+ + L ++ N L ++P +I L +L N+++
Sbjct: 674 LGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLS 733
Query: 63 S-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS-ISLQNNQITS-MNSSLSGLT 119
L + L+KL + N +T E L +L S + L N T + S++S L
Sbjct: 734 GPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLP 793
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
KL L LSHNQL + I +K L ++LSYN +
Sbjct: 794 KLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNL 829
>UNIPROTKB|E1C125 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:AADN02013465 IPI:IPI00592627 RefSeq:XP_420266.3
Ensembl:ENSGALT00000011717 GeneID:422287 KEGG:gga:422287
Uniprot:E1C125
Length = 837
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/178 (25%), Positives = 90/178 (50%)
Query: 166 NQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
N T+ L+L +N+++N++G A +G+ L +L L++N+L+ + D F+G+++L+ L
Sbjct: 77 NTFLNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYL 136
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQ 284
+NL+ ++E + L L+ L ++ N ++ L + L D+ N I+ +
Sbjct: 137 QADYNLIKSIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGNRIQKLPYI 196
Query: 285 LALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQPDSN 342
L+ + + + LE NP C + + +E + N I GE IC+ S+
Sbjct: 197 GVLEH------IGRIVELQLEDNPWNCTCDLLPLKAWLENMPYNIYI-GEAICETPSD 247
Score = 131 (51.2 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 43/152 (28%), Positives = 76/152 (50%)
Query: 35 QNQLEAL--PSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDE 91
QN L + P+ F+ SL NN++ +++G GL+ L+ +++ N++ ++R D
Sbjct: 67 QNNLLIILYPNTFLNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADT 126
Query: 92 FQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 150
F + NL+ + N I S+ + + L KL L L+ N L FL D+I L +D+
Sbjct: 127 FLGIENLEYLQADYNLIKSIERGAFNKLHKLKVLILNDN-LISFLPDNIFRFASLTHLDI 185
Query: 151 SYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
N+I K ++ + I EL+L+ N
Sbjct: 186 RGNRIQKLPYIGV----LEHIGRIVELQLEDN 213
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD 65
L +N N +K ++ L LL + N++ A+ ++ + + L LY N N+I L
Sbjct: 382 LHVNGNYIKDVDTADFTEFEGLDLLHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLS 441
Query: 66 G-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
+ GL LQ +++N I + F + NL + L NN + S+ + + LA L
Sbjct: 442 PEMFAGLHNLQYLYLEYNVIKEILAGTFDLMPNLQLLYLNNNLLRSLPAYIFAGAPLARL 501
Query: 125 YLSHNQLTEFLLDDIRG-LKRLRTVDLSYN 153
L +N + + LK L +DL N
Sbjct: 502 NLRNNHFMYLPVSGVLDQLKSLTQIDLEGN 531
Score = 123 (48.4 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 44/164 (26%), Positives = 80/164 (48%)
Query: 177 LKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N I + G + + L RL L+ N++ +SP+ F GL +L+ L + +N++ +
Sbjct: 406 LHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLSPEMFAGLHNLQYLYLEYNVIKEIL 465
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
+ +P L+ L++++N L L F G P L + +L +N+ + + L
Sbjct: 466 AGTFDLMPNLQLLYLNNNLLRSLPAYIFAGAP-LARLNLRNNHFMYLPVSGVLDQ----- 519
Query: 295 GLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQ 338
L S +I LEGNP C + A+ +E ++ + E C+
Sbjct: 520 -LKSLTQIDLEGNPWDCTCDLVALKLWLEKLSEGIVVK-ELKCE 561
Score = 100 (40.3 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 39/128 (30%), Positives = 67/128 (52%)
Query: 8 LFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL 64
L L NN+L+++EG LG LS L+ L + N+L+ L +D L L L A+ N I S+
Sbjct: 88 LQLGNNKLQNIEGGAFLG-LSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKSI 146
Query: 65 D-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN--SSLSGLTKL 121
+ G L KL+V ++ N I+ + + F+ +L + ++ N+I + L + ++
Sbjct: 147 ERGAFNKLHKLKVLILNDNLISFLPDNIFR-FASLTHLDIRGNRIQKLPYIGVLEHIGRI 205
Query: 122 AYLYLSHN 129
L L N
Sbjct: 206 VELQLEDN 213
Score = 98 (39.6 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
G+ +L +L + N +KS+E G L KL++L++ N + LP +I F+ L L N
Sbjct: 129 GIENLEYLQADYNLIKSIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGN 188
Query: 60 RITSLD--GLLRGLTKLQVFNMDFN 82
RI L G+L + ++ ++ N
Sbjct: 189 RIQKLPYIGVLEHIGRIVELQLEDN 213
Score = 82 (33.9 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 31/123 (25%), Positives = 53/123 (43%)
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
Q IE++ L +L ++ N ++ + DF + L +L + N ++ +
Sbjct: 362 QERNIESMAELLPKPLNAKKLHVNGNYIKDVDTADFTEFEGLDLLHLGSNRISAIRGEVF 421
Query: 240 TFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINI-QLALKTQCQIFGLN 297
L L L+++ N + RL + F GL L L +N IK I L Q+ LN
Sbjct: 422 RNLTNLRRLYLNGNQIERLSPEMFAGLHNLQYLYLEYNVIKEILAGTFDLMPNLQLLYLN 481
Query: 298 STL 300
+ L
Sbjct: 482 NNL 484
Score = 70 (29.7 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYAN 57
GL+ L L LNNN LK L LG + L+ L + N ++++ +L L N
Sbjct: 105 GLSALKQLHLNNNELKILRADTFLG-IENLEYLQADYNLIKSIERGAFNKLHKLKVLILN 163
Query: 58 NNRITSL-DGLLR--GLTKLQV 76
+N I+ L D + R LT L +
Sbjct: 164 DNLISFLPDNIFRFASLTHLDI 185
Score = 66 (28.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 33/154 (21%), Positives = 59/154 (38%)
Query: 55 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS- 113
+ NN I T + N++ + F L L + L NN++ + +
Sbjct: 66 FQNNLLIILYPNTFLNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRAD 125
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
+ G+ L YL +N + L +L+ + L+ N I+ F N + +
Sbjct: 126 TFLGIENLEYLQADYNLIKSIERGAFNKLHKLKVLILNDNLIS-FLPDN-----IFRFAS 179
Query: 174 IFELKLQHNEIENLD--GALMGIHGLSRLDLSHN 205
+ L ++ N I+ L G L I + L L N
Sbjct: 180 LTHLDIRGNRIQKLPYIGVLEHIGRIVELQLEDN 213
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N +T +D GLK+LR + L N+I+ + + + L+L N+
Sbjct: 73 LELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVE-----RGAFDDMKELERLRLNRNQ 127
Query: 184 IENLDGALMGIH-GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+ L L + LSRLDLS N ++ I F G LK L + N ++ +E+ + L
Sbjct: 128 LHTLPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRAL 187
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
LE L +++N++T + F+ +P L L H+N + LA Q
Sbjct: 188 RGLEVLTLNNNNITSIPVSSFNHMPKLRTFRL-HSNHLFCDCHLAWLAQ 235
Score = 140 (54.3 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 44/135 (32%), Positives = 68/135 (50%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANN 58
GL L L L N++ +E G + +L+ L + +NQL LP + +Q L L +
Sbjct: 90 GLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSE 149
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N I ++ RG T L+ +D NQI+ + F+ L L+ ++L NN ITS+ SS +
Sbjct: 150 NFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSFN 209
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 210 HMPKLRTFRLHSNHL 224
Score = 140 (54.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 43/130 (33%), Positives = 66/130 (50%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLV------IEQNQL-EALPSDIQLFSQLGSLYANNNRI 61
L N +KS+ G KL+ ++ + NQ+ E P Q L SL N+I
Sbjct: 323 LELNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKI 382
Query: 62 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLT 119
T L G+ GL LQ+ ++ N+I VR D FQ+L NL +SL +N+I S+ + + L
Sbjct: 383 TDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 442
Query: 120 KLAYLYLSHN 129
+ L+L+ N
Sbjct: 443 AIQTLHLAQN 452
Score = 139 (54.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLS 127
RG +L+ ++ N IT + +++F L L + L NQI+ + + + +L L L+
Sbjct: 68 RGTERLE---LNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLN 124
Query: 128 HNQL---TEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
NQL E L + L RL DLS N I + +G T++ L+L N+I
Sbjct: 125 RNQLHTLPELLFQHNQALSRL---DLSENFIQAIP-----RKAFRGATDLKNLQLDKNQI 176
Query: 185 ENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
+ DGA + GL L L++N + +I F + L+ + N L
Sbjct: 177 SCIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSNHL 224
Score = 137 (53.3 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 71/255 (27%), Positives = 117/255 (45%)
Query: 33 IEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRD 90
+ NQ+ E P Q L SL N+IT L G+ GL LQ+ ++ N+I VR D
Sbjct: 353 LSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLNANKINCVRAD 412
Query: 91 EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLT-----EFLLDDIR---- 140
FQ+L NL +SL +N+I S+ + + L + L+L+ N ++L D +R
Sbjct: 413 AFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCNLKWLADFLRANPI 472
Query: 141 ---GLK-----RLRTVDLSYNKINKFGTRNEGKNQ--VQGVTNIFELKLQHNEIENLDGA 190
G + RL + K KF R K Q + G T ++L + N
Sbjct: 473 ETSGARCASPRRLANKRIGQIKSKKF--RCSAKEQYFIPG-TEDYQLNSECNSDVVCPPK 529
Query: 191 LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF--LPALEEL 248
G+ ++ S+ KL I P+ S L +++N ++ LE T F LP L+++
Sbjct: 530 CRCEAGV--VECSNLKLTKI-PERIP--QSTAELRLNNNEISILEATG-IFKKLPHLKKI 583
Query: 249 FVSHNSLTRLDKDFH 263
+S+N ++ ++ H
Sbjct: 584 NLSNNKVSEIEGIHH 598
Score = 118 (46.6 bits), Expect = 0.00095, P = 0.00095
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
G RL+L+ N + I +DF GL L++L + N ++ +E + + LE L ++ N L
Sbjct: 69 GTERLELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQL 128
Query: 256 TRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC--D 312
L + F L + DL+ N I+AI + A + G + L+ N + C D
Sbjct: 129 HTLPELLFQHNQALSRLDLSENFIQAIP-RKAFR------GATDLKNLQLDKNQISCIED 181
Query: 313 DSMRAV--IDAMETINNN 328
+ RA+ ++ + T+NNN
Sbjct: 182 GAFRALRGLEVL-TLNNN 198
Score = 113 (44.8 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 176 ELKLQHNEIENLD-GALMGIHGLSRL------DLSHNKLRTISPDDFIGLDSLKMLDISH 228
E++L+ N I+++ GA L R+ DLS+N++ I+PD F GL SL L +
Sbjct: 320 EIRLELNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYG 379
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLAL 287
N +T L + L AL+ L ++ N + + D F L L L N I++ LA
Sbjct: 380 NKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQS----LAK 435
Query: 288 KTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
T L + ++L NP +CD +++ + D + N + G P
Sbjct: 436 GT---FTSLRAIQTLHLAQNPFVCDCNLKWLADFLRA--NPIETSGARCASP 482
Score = 107 (42.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/136 (27%), Positives = 67/136 (49%)
Query: 131 LTEFLLDDIRGLKRLRTVDLS-YNKINKF---GTRNEGKNQV--------QGVTNIFELK 178
+TE L+ + G+K + S Y K+ + G R+ NQ+ QG+ ++ L
Sbjct: 318 MTEIRLE-LNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLV 376
Query: 179 LQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L N+I +L G G+ L L L+ NK+ + D F L +L +L + N + +L +
Sbjct: 377 LYGNKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKG 436
Query: 238 SKTFLPALEELFVSHN 253
+ T L A++ L ++ N
Sbjct: 437 TFTSLRAIQTLHLAQN 452
Score = 94 (38.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 32/116 (27%), Positives = 56/116 (48%)
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
L + L + LS+NQ++E D +GL+ L ++ L NKI K G+ +
Sbjct: 342 LRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLP-----KGVFGGLFAL 396
Query: 175 FELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
L L N+I + A + LS L L NK+++++ F L +++ L ++ N
Sbjct: 397 QLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 452
Score = 55 (24.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISP 212
N+ EL L N+ + G L L + LS+N L+ I P
Sbjct: 776 NVTELYLDGNQFTQVPGQLSTFKYLQLVILSYNSLQCIPP 815
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 204 (76.9 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 85/288 (29%), Positives = 128/288 (44%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YA 56
GL L L L NN+L+ + E L L LQ L ++ N + +P FS L SL +
Sbjct: 112 GLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSC--FSGLHSLRHLWL 169
Query: 57 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS- 114
++N +T + R L+ LQ + N+I + F NL +L + L NN+I S+
Sbjct: 170 DDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKC 229
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
GL L L L++N L EF I+ L L+ + N I R G ++
Sbjct: 230 FDGLHSLETLDLNYNNLDEFPTA-IKTLSNLKELGFHSNNIRSIPER-----AFVGNPSL 283
Query: 175 FELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+ N I+ + A + L L L+ T PD G +L+ L ++ +++
Sbjct: 284 ITIHFYDNPIQFVGISAFQHLPELRTLTLNGASQITEFPD-LTGTATLESLTLTGAKISS 342
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L +T LP L+ L +S+N L L G L K DL HN I I
Sbjct: 343 LPQTVCDQLPNLQVLDLSYNLLEDLPS-LSGCQKLQKIDLRHNEIYEI 389
Score = 186 (70.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 71/250 (28%), Positives = 116/250 (46%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L LPS++ +F+ L NN I+ L LL L L+ + N +T + + F LH
Sbjct: 57 LSELPSNLSVFTSYLDLSMNN--ISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLH 114
Query: 97 NLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
+L + LQNNQ+ + +L L L L L N ++ GL LR + L N +
Sbjct: 115 SLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 156 NKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDD 214
+ + ++ + + L N+I ++ D A + L L L +N++ ++
Sbjct: 175 TDVPVQ-----AFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKC 229
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEEL-FVSHNSLTRLDKDFHGLPVLCKADL 273
F GL SL+ LD+++N L KT L L+EL F S+N + ++ F G P L
Sbjct: 230 FDGLHSLETLDLNYNNLDEFPTAIKT-LSNLKELGFHSNNIRSIPERAFVGNPSLITIHF 288
Query: 274 AHNNIKAINI 283
N I+ + I
Sbjct: 289 YDNPIQFVGI 298
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 68/269 (25%), Positives = 124/269 (46%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
L+ L + L N++ + + G LS L +L + N++ +L L +L N N
Sbjct: 185 LSALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 244
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGL 118
+ ++ L+ L+ N I + F +L +I +N I + S+ L
Sbjct: 245 NLDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGISAFQHL 304
Query: 119 TKLAYLYLSH-NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+L L L+ +Q+TEF D+ G L ++ L+ KI+ + + N+ L
Sbjct: 305 PELRTLTLNGASQITEF--PDLTGTATLESLTLTGAKISSLP-----QTVCDQLPNLQVL 357
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N +E+L +L G L ++DL HN++ I F L +L+ L+++ N + +
Sbjct: 358 DLSYNLLEDLP-SLSGCQKLQKIDLRHNEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPN 416
Query: 238 SKTFLPALEELFVSHNSLTRLD-KDFHGL 265
+ + LP+L +L +S N L+ HGL
Sbjct: 417 AFSTLPSLIKLDLSSNLLSSFPVTGLHGL 445
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 77/296 (26%), Positives = 135/296 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YA 56
GL L L+L++N L + Q +LS LQ + + N++ + +D F L SL +
Sbjct: 160 GLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHI-AD-HAFGNLSSLVVLHL 217
Query: 57 NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEF----QNLHNLDSISLQNNQITSM 111
+NNRI SL GL L+ ++++N + DEF + L NL + +N I S+
Sbjct: 218 HNNRIHSLGKKCFDGLHSLETLDLNYNNL-----DEFPTAIKTLSNLKELGFHSNNIRSI 272
Query: 112 -NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS-YNKINKFGTRNEGKNQVQ 169
+ G L ++ N + + + L LRT+ L+ ++I +F +
Sbjct: 273 PERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGASQITEFP-------DLT 325
Query: 170 GVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
G + L L +I +L + + L LDLS+N L + P G L+ +D+ H
Sbjct: 326 GTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNLLEDL-PS-LSGCQKLQKIDLRH 383
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINI 283
N + ++ + L L L ++ N + + + F LP L K DL+ N + + +
Sbjct: 384 NEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPV 439
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 70/283 (24%), Positives = 120/283 (42%)
Query: 6 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRI 61
++L L+ N + L L L L+ L + N L +P F+ L SL NN++
Sbjct: 69 SYLDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGA--FAGLHSLKVLMLQNNQL 126
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLT 119
+ + L+ L LQ +D N I+ V F LH+L + L +N +T + + L+
Sbjct: 127 RQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLS 186
Query: 120 KLAYLYLSHNQLTEFLLDDIRG-LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L + L+ N++ + D G L L + L N+I+ G K G+ ++ L
Sbjct: 187 ALQAMTLALNKI-HHIADHAFGNLSSLVVLHLHNNRIHSLG-----KKCFDGLHSLETLD 240
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETS 238
L +N ++ A+ + L L N +R+I F+G SL + N + + ++
Sbjct: 241 LNYNNLDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGISA 300
Query: 239 KTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
LP L L ++ S D G L L I ++
Sbjct: 301 FQHLPELRTLTLNGASQITEFPDLTGTATLESLTLTGAKISSL 343
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 61/228 (26%), Positives = 107/228 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS-QLGSLYANNN 59
GL L L LN N L + TLS L+ L N + ++P + + L +++ +N
Sbjct: 232 GLHSLETLDLNYNNLDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDN 291
Query: 60 RITSLD-GLLRGLTKLQVFNMD-FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
I + + L +L+ ++ +QIT + L+S++L +I+S+ ++
Sbjct: 292 PIQFVGISAFQHLPELRTLTLNGASQITEF--PDLTGTATLESLTLTGAKISSLPQTVCD 349
Query: 118 -LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L LS+N L + L + G ++L+ +DL +N+I + +G Q + N+
Sbjct: 350 QLPNLQVLDLSYNLLED--LPSLSGCQKLQKIDLRHNEIYEI----KG-GTFQQLFNLRS 402
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKM 223
L L N+I + A + L +LDLS N L + GL LK+
Sbjct: 403 LNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTGLHGLTHLKL 450
Score = 128 (50.1 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 56/232 (24%), Positives = 109/232 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE--QNQLEALP-SDIQLFSQLGSLYANN 58
L++L L ++N ++S+ + + L+ I N ++ + S Q +L +L N
Sbjct: 256 LSNLKELGFHSNNIRSIP-ERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNG 314
Query: 59 -NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
++IT L G L+ + +I+ + + L NL + L N + + SLSG
Sbjct: 315 ASQITEFPDLT-GTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNLLEDL-PSLSG 372
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
KL + L HN++ E + L LR+++L+ NKI N + ++ +L
Sbjct: 373 CQKLQKIDLRHNEIYEIKGGTFQQLFNLRSLNLARNKIAIIHP-----NAFSTLPSLIKL 427
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNK-LRTISPDDFIGLDSLKMLDISH 228
L N + + + G+HGL+ L L+ N+ L+++ P LK++++ +
Sbjct: 428 DLSSNLLSSFP--VTGLHGLTHLKLTGNRALQSLIPS--ANFPELKIIEMPY 475
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 56/218 (25%), Positives = 94/218 (43%)
Query: 101 ISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ L N I+ + +SL L L L L+ N LT GL L+ + L N++
Sbjct: 71 LDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQL---- 126
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
R + +Q + ++ L+L N I + G+H L L L N L + F L
Sbjct: 127 -RQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSL 185
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
+L+ + ++ N + + + + L +L L + +N + L K F GL L DL +NN
Sbjct: 186 SALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNN 245
Query: 278 IKAINIQLALKTQCQIFGLNST-LRIYLE----GNPVL 310
+ + + + G +S +R E GNP L
Sbjct: 246 LDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSL 283
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 153 (58.9 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 52/156 (33%), Positives = 76/156 (48%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + + NQ+ E P Q L SL N+IT L G
Sbjct: 202 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRG 261
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLY 125
+ GL LQ+ ++ N+I +R D FQ+L NL +SL +N+I S+ + + L + L+
Sbjct: 262 VFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLH 321
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
L+ N F+ D LK L L N I G R
Sbjct: 322 LAQNP---FICDC--NLKWLADF-LRTNPIETTGAR 351
Score = 151 (58.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 84/337 (24%), Positives = 148/337 (43%)
Query: 5 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L+ L L+ N L+++ + + L+ L +++NQ+ + + L L NNN IT
Sbjct: 21 LSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNIT 80
Query: 63 SLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS--LQNNQITSMNSSLSGLT 119
++ + KL+ F + N + F + H L +S L+ + + SG
Sbjct: 81 TIPVSSFNHMPKLRTFRLHSNHL-------FCDCH-LAWLSQWLRQRPTIGLFTQCSGPA 132
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG--KNQVQGVTNI--- 174
L L ++ Q +EF ++ LS + + G + +G+T I
Sbjct: 133 SLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLTAIPAN 192
Query: 175 -----FELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
E++L+ N I+++ GA L R+DLS+N++ I+PD F GL SL L +
Sbjct: 193 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 252
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLAL 287
N +T L L L+ L ++ N + + D F L L L N I++ LA
Sbjct: 253 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS----LAK 308
Query: 288 KTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
T L + ++L NP +CD +++ + D + T
Sbjct: 309 GT---FTSLRAIQTLHLAQNPFICDCNLKWLADFLRT 342
Score = 136 (52.9 bits), Expect = 5.8e-07, Sum P(4) = 5.8e-07
Identities = 37/127 (29%), Positives = 70/127 (55%)
Query: 124 LYLSHNQLTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L++N+++ + + L L+ ++LS NK+++ +G +G T++ EL L N
Sbjct: 431 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEI---EDGT--FEGATSVSELHLTAN 485
Query: 183 EIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
++E++ G G+ GL L L +N++ I D F GL ++++L + N +TT+ +
Sbjct: 486 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 545
Query: 242 LPALEEL 248
L AL L
Sbjct: 546 LQALSTL 552
Score = 131 (51.2 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 31 LVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMV 87
L + N++ L + + S L + +NN+++ + DG G T + ++ NQ+ V
Sbjct: 431 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 490
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
R F+ L L ++ L+NN+I+ + N S +GL + L L N +T L+ L
Sbjct: 491 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 550
Query: 147 TVDLSYNKIN 156
T++L N N
Sbjct: 551 TLNLLANPFN 560
Score = 121 (47.7 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 72 TKLQVFNMDFNQITMVRRDE-FQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHN 129
T+L++ N N+I+++ F+ L +L I+L NN+++ + + + G T ++ L+L+ N
Sbjct: 429 TELRLNN---NEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTAN 485
Query: 130 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD- 188
QL RGL LRT+ L N+I+ N+ G+ N+ L L N I +
Sbjct: 486 QLESVRSGMFRGLDGLRTLMLRNNRISCI--HNDS---FTGLRNVRLLSLYDNHITTISP 540
Query: 189 GALMGIHGLSRLDLSHN 205
GA + LS L+L N
Sbjct: 541 GAFDTLQALSTLNLLAN 557
Score = 119 (46.9 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 36/127 (28%), Positives = 64/127 (50%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN + LE G LS L+ + + N++ + + + + L+ N++ S+
Sbjct: 431 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 490
Query: 65 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
G+ RGL L+ + N+I+ + D F L N+ +SL +N IT+++ + L L+
Sbjct: 491 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 550
Query: 123 YLYLSHN 129
L L N
Sbjct: 551 TLNLLAN 557
Score = 106 (42.4 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
T +L N N+ E + ++++ ++ L +N++ + DG G +S L L+ N
Sbjct: 428 TTELRLNN-NEISIL-EATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTAN 485
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L ++ F GLD L+ L + +N ++ + S T L + L + N +T + F
Sbjct: 486 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 545
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N QLA
Sbjct: 546 LQALSTLNLLANPFNC-NCQLA 566
Score = 92 (37.4 bits), Expect = 8.4e-12, Sum P(3) = 8.4e-12
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N+I +L + + + L+ L LS+N L+ I P F GL SL++L + N ++TL+E
Sbjct: 677 LSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEG 736
Query: 238 SKTFLPALEELFVSHNSL 255
+ +L L + N L
Sbjct: 737 IFADVTSLSHLAIGANPL 754
Score = 91 (37.1 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
N+ EL L N+ + G L L +DLS+NK+ ++S F + L L +S+N L
Sbjct: 648 NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 707
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK 260
+ + L +L L + N ++ L +
Sbjct: 708 CIPPLAFQGLRSLRLLSLHGNDVSTLQE 735
Score = 69 (29.3 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIR 140
NQ+ ++ FQN L + L N + ++ + G T L L L NQ++ R
Sbjct: 5 NQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFR 64
Query: 141 GLKRLRTVDLSYNKI 155
L+ L + L+ N I
Sbjct: 65 ALRGLEVLTLNNNNI 79
Score = 63 (27.2 bits), Expect = 5.8e-07, Sum P(4) = 5.8e-07
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANN 58
G TDL L L+ N++ +E G L L++L + N + +P S +L + ++
Sbjct: 41 GATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHS 100
Query: 59 NRI 61
N +
Sbjct: 101 NHL 103
Score = 41 (19.5 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHG 333
+ LNS +Y+ G PV D A + +N T HG
Sbjct: 1160 YTLNSEAPLYVGGMPV---DVNSAAFRLWQILNG-TSFHG 1195
Score = 38 (18.4 bits), Expect = 5.8e-07, Sum P(4) = 5.8e-07
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAIN 282
EL++ N T + L DL++N I +++
Sbjct: 651 ELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLS 686
>UNIPROTKB|E1C5R1 [details] [associations]
symbol:LOC428618 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0000122 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030512 GO:GO:0005614
GeneTree:ENSGT00700000104286 OMA:RRLYISH EMBL:AADN02001982
IPI:IPI00573069 RefSeq:XP_426175.3 ProteinModelPortal:E1C5R1
Ensembl:ENSGALT00000024034 GeneID:428618 KEGG:gga:428618
Uniprot:E1C5R1
Length = 512
Score = 200 (75.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 93/334 (27%), Positives = 149/334 (44%)
Query: 5 LNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L L L +N + +L L KL++L I N + LPS L SL + N +
Sbjct: 118 LEILKLADNSINTLHATDFEGLVKLRVLDIRNNLIATLPSSAFSSLCNLQSLILDGNNME 177
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 122
+ L+ L +L+ +M N++ + F + NL +SL N +T + L L
Sbjct: 178 FVSAPLK-LPRLKYLSMADNRLNSLPASFFASFGNLQFLSLSGNFLTKVPLDLP--KSLL 234
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
L L NQL L D++ L+ L LS N++ T +G + + +T L+L N
Sbjct: 235 SLKLDKNQLKTVQLQDMKHLENLSEFFLSENQL----TSVDGAHLLPNLTT---LELSKN 287
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+++ L L G L +LD S+N ++ ++ +F GL LK L + +N ++ E +
Sbjct: 288 QLQALPLRLPG--RLQKLDCSNNLIQRVTAQEFQGLQDLKHLFLDNNAVSMFEAGALQHC 345
Query: 243 PALEELFVSHNSLTRLDKDFHGLP-VLCKADLAHNNIKAINIQLALKT--QCQIFGLNST 299
L L + N L + LP L + DL N+I+ + Q LK Q Q+ L +
Sbjct: 346 AQLSNLALEQNLLISIPLR---LPDTLARLDLKGNDIEDVGEQ-ELKDLKQLQVLNLRNN 401
Query: 300 ---------------LR-IYLEGNPVLCD-DSMR 316
LR +YL+GNP C D +R
Sbjct: 402 KISALDRKVLEYLPRLRHLYLDGNPWNCTCDLLR 435
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 66/254 (25%), Positives = 118/254 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L L +L + +NRL SL + LQ L + N L +P D+ L SL + N+
Sbjct: 185 LPRLKYLSMADNRLNSLPASFFASFGNLQFLSLSGNFLTKVPLDLP--KSLLSLKLDKNQ 242
Query: 61 ITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
+ ++ ++ L L F + NQ+T V D L NL ++ L NQ+ ++ L G
Sbjct: 243 LKTVQLQDMKHLENLSEFFLSENQLTSV--DGAHLLPNLTTLELSKNQLQALPLRLPG-- 298
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
+L L S+N + + +GL+ L+ + L N ++ F +Q + L L
Sbjct: 299 RLQKLDCSNNLIQRVTAQEFQGLQDLKHLFLDNNAVSMFEA-----GALQHCAQLSNLAL 353
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
+ N + ++ L L+RLDL N + + + L L++L++ +N ++ L+
Sbjct: 354 EQNLLISIPLRLPDT--LARLDLKGNDIEDVGEQELKDLKQLQVLNLRNNKISALDRKVL 411
Query: 240 TFLPALEELFVSHN 253
+LP L L++ N
Sbjct: 412 EYLPRLRHLYLDGN 425
Score = 185 (70.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 77/276 (27%), Positives = 133/276 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
++ L L L+ + +S+E LS L+ L + +NQL+ +P I L S L L +N
Sbjct: 70 MSALEELVLSCSGTESIENNTFKALSSLKSLELYKNQLKQIP--IFLPSGLEILKLADNS 127
Query: 61 ITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
I +L GL KL+V ++ N I + F +L NL S+ L N + +++ L L
Sbjct: 128 INTLHATDFEGLVKLRVLDIRNNLIATLPSSAFSSLCNLQSLILDGNNMEFVSAPLK-LP 186
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG--------TRNEGKNQVQGV 171
+L YL ++ N+L L+ + LS N + K + KNQ++ V
Sbjct: 187 RLKYLSMADNRLNSLPASFFASFGNLQFLSLSGNFLTKVPLDLPKSLLSLKLDKNQLKTV 246
Query: 172 T--------NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKM 223
N+ E L N++ ++DGA + + L+ L+LS N+L+ + P G L+
Sbjct: 247 QLQDMKHLENLSEFFLSENQLTSVDGAHL-LPNLTTLELSKNQLQAL-PLRLPG--RLQK 302
Query: 224 LDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
LD S+NL+ + L L+ LF+ +N+++ +
Sbjct: 303 LDCSNNLIQRVTAQEFQGLQDLKHLFLDNNAVSMFE 338
Score = 153 (58.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 43/158 (27%), Positives = 82/158 (51%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
LY+SH+++ + + D R + L + LS + GT + N + ++++ L+L N+
Sbjct: 52 LYISHSKIKQLQITDFRRMSALEELVLSCS-----GTESIENNTFKALSSLKSLELYKNQ 106
Query: 184 IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
++ + L GL L L+ N + T+ DF GL L++LDI +NL+ TL ++ + L
Sbjct: 107 LKQIPIFLPS--GLEILKLADNSINTLHATDFEGLVKLRVLDIRNNLIATLPSSAFSSLC 164
Query: 244 ALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L+ L + N++ + LP L +A N + ++
Sbjct: 165 NLQSLILDGNNMEFVSAPLK-LPRLKYLSMADNRLNSL 201
Score = 117 (46.2 bits), Expect = 0.00066, P = 0.00066
Identities = 37/108 (34%), Positives = 56/108 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GL DL LFL+NN + E G L ++L L +EQN L ++P ++L L L N
Sbjct: 320 GLQDLKHLFLDNNAVSMFEAGALQHCAQLSNLALEQNLLISIP--LRLPDTLARLDLKGN 377
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 106
I + + L+ L +LQV N+ N+I+ + R + L L + L N
Sbjct: 378 DIEDVGEQELKDLKQLQVLNLRNNKISALDRKVLEYLPRLRHLYLDGN 425
>UNIPROTKB|O42235 [details] [associations]
symbol:KERA "Keratocan" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0061303 "cornea development in camera-type eye" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:11081 KO:K08123 OrthoDB:EOG4KSPK3
EMBL:AF022890 IPI:IPI00588620 RefSeq:NP_989507.1 UniGene:Gga.4837
ProteinModelPortal:O42235 Ensembl:ENSGALT00000018391 GeneID:373995
KEGG:gga:373995 InParanoid:O42235 OMA:RWINLNK NextBio:20813523
Uniprot:O42235
Length = 353
Score = 196 (74.1 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 56/215 (26%), Positives = 113/215 (52%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLV---IEQNQLEALPSDIQLFSQLGSLYANNN 59
T L W+ LN N++ + + G LSKL+ L+ +E N+LE +P+ + + L L N
Sbjct: 96 THLRWINLNKNKITNNGIESGVLSKLKRLLYLFLEDNELEEVPAPLPV--GLEQLRLARN 153
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
+I+ + +G+ L L + ++ N + + ++ D FQ L++L +++ N + M S+
Sbjct: 154 KISRIPEGVFSNLENLTMLDLHQNNLLDSALQSDTFQGLNSLMQLNIAKNSLKKMPLSIP 213
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
T L+L +N + + + ++ + L+YNK++ G G N V++I +
Sbjct: 214 ANT--LQLFLDNNSIEVIPENYFSAIPKVTFLRLNYNKLSDDGIPPNGFN----VSSILD 267
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
L+L HN++ + + H L L L HN++++++
Sbjct: 268 LQLSHNQLTKIPP--INAH-LEHLHLDHNRIKSVN 299
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 64/239 (26%), Positives = 114/239 (47%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-- 110
+LY +N + + + + L + N N I + F N +L I+L N+IT+
Sbjct: 56 ALYCDNKGLKEIPAIPARIWYLYLQN---NLIETISEKPFVNATHLRWINLNKNKITNNG 112
Query: 111 MNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
+ S LS L +L YL+L N+L E GL++LR L+ NKI++ EG
Sbjct: 113 IESGVLSKLKRLLYLFLEDNELEEVPAPLPVGLEQLR---LARNKISRIP---EGV--FS 164
Query: 170 GVTNIFELKLQHNEIENLDGALM-----GIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
+ N+ L L N + LD AL G++ L +L+++ N L+ + I ++L++
Sbjct: 165 NLENLTMLDLHQNNL--LDSALQSDTFQGLNSLMQLNIAKNSLKKMPLS--IPANTLQLF 220
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADL--AHNNIKAI 281
+ +N + + E + +P + L +++N L+ +G V DL +HN + I
Sbjct: 221 -LDNNSIEVIPENYFSAIPKVTFLRLNYNKLSDDGIPPNGFNVSSILDLQLSHNQLTKI 278
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 62/290 (21%), Positives = 132/290 (45%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITM--V 87
L + L+ +P+ + +++ LY NN I ++ + T L+ N++ N+IT +
Sbjct: 57 LYCDNKGLKEIPA---IPARIWYLYLQNNLIETISEKPFVNATHLRWINLNKNKITNNGI 113
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
L L + L++N++ + + L L L L+ N+++ L+ L
Sbjct: 114 ESGVLSKLKRLLYLFLEDNELEEVPAPLP--VGLEQLRLARNKISRIPEGVFSNLENLTM 171
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+DL N + +++ QG+ ++ +L + N ++ + ++ +L L +N +
Sbjct: 172 LDLHQNNLLDSALQSD---TFQGLNSLMQLNIAKNSLKKMPLSIPA--NTLQLFLDNNSI 226
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF-LPALEELFVSHNSLTRLDKDFHGLP 266
I + F + + L +++N L+ F + ++ +L +SHN LT++ L
Sbjct: 227 EVIPENYFSAIPKVTFLRLNYNKLSDDGIPPNGFNVSSILDLQLSHNQLTKIPPINAHLE 286
Query: 267 VLCKADLAHNNIKAIN------IQLALKTQCQIFGLNSTLR-IYLEGNPV 309
L L HN IK++N + +A+ ++G LR + L+GN +
Sbjct: 287 HL---HLDHNRIKSVNGTQICPVSIAVAEDYGLYGNIPRLRYLRLDGNEI 333
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 60/242 (24%), Positives = 110/242 (45%)
Query: 7 WLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL--EALPSDI-QLFSQLGSLYANNNRIT 62
+L+L NN ++++ E + L+ + + +N++ + S + +L L+ +N +
Sbjct: 76 YLYLQNNLIETISEKPFVNATHLRWINLNKNKITNNGIESGVLSKLKRLLYLFLEDNELE 135
Query: 63 SLDGLLR-GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL-QNNQITS--MNSSLSGL 118
+ L GL +L++ N+I+ + F NL NL + L QNN + S + + GL
Sbjct: 136 EVPAPLPVGLEQLRLAR---NKISRIPEGVFSNLENLTMLDLHQNNLLDSALQSDTFQGL 192
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L ++ N L + L +L L N I +N + + L+
Sbjct: 193 NSLMQLNIAKNSLKKMPLSIPANTLQLF---LDNNSIEVIP-----ENYFSAIPKVTFLR 244
Query: 179 LQHNEIENLDGALM-GIHGLSRLDL--SHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L +N++ + DG G + S LDL SHN+L I P + L+ L + HN + ++
Sbjct: 245 LNYNKLSD-DGIPPNGFNVSSILDLQLSHNQLTKIPPINA----HLEHLHLDHNRIKSVN 299
Query: 236 ET 237
T
Sbjct: 300 GT 301
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 149 (57.5 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 42/124 (33%), Positives = 64/124 (51%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + + NQ+ E P Q L SL N+IT L G
Sbjct: 180 LELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRG 239
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLY 125
+ GL LQ+ ++ N+I VR D FQ+L NL +SL +N+I + + + L + L+
Sbjct: 240 VFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLH 299
Query: 126 LSHN 129
L+ N
Sbjct: 300 LAQN 303
Score = 133 (51.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 77/301 (25%), Positives = 128/301 (42%)
Query: 28 LQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQIT 85
L+ L +++NQ+ + + L L NNN I+++ + KL+ F + N +
Sbjct: 23 LKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHSNHL- 81
Query: 86 MVRRDEFQNLHNLDSIS--LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 143
F + H L +S L+ + + SG L L ++ Q +EF
Sbjct: 82 ------FCDCH-LAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAG 134
Query: 144 RLRTVDLSYNKINKFGTRNEG--KNQVQGVTNI--------FELKLQHNEIENLD-GALM 192
R+ + LS + G + +G+T I E++L+ N I+++ GA
Sbjct: 135 RVPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFS 194
Query: 193 GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSH 252
L R+DLS+N++ I+PD F GL SL L + N +T L L L+ L ++
Sbjct: 195 PYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLFTLQLLLLNA 254
Query: 253 NSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLC 311
N + + D F L L L N I+ LA T L + ++L NP +C
Sbjct: 255 NKINCVRPDAFQDLQNLSLLSLYDNKIQG----LAKGT---FTSLRAIQTLHLAQNPFIC 307
Query: 312 D 312
D
Sbjct: 308 D 308
Score = 122 (48.0 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 33/130 (25%), Positives = 63/130 (48%)
Query: 31 LVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMV 87
L + N++ L + + + L + +NN+++ + DG G + ++ NQ+ +
Sbjct: 408 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 467
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
R F+ L L ++ L+NN+I+ + N S +GL + L L NQ+ L+ L
Sbjct: 468 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALS 527
Query: 147 TVDLSYNKIN 156
T++L N N
Sbjct: 528 TLNLLANPFN 537
Score = 121 (47.7 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 32 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRR 89
V+E + L+ ++ L NNN I+ L+ G+ + LT L+ N+ N+++ +
Sbjct: 386 VVECSSLKLSKIPERIPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIED 445
Query: 90 DEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 148
F+ ++ + L NQ+ S+ S + GL L L L +N+++ D GL+ +R +
Sbjct: 446 GAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLL 505
Query: 149 DLSYNKI 155
L N+I
Sbjct: 506 SLYDNQI 512
Score = 119 (46.9 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 35/127 (27%), Positives = 64/127 (50%)
Query: 8 LFLNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL 64
L LNNN + LE G L+ L+ + + N++ + + + + L+ N++ S+
Sbjct: 408 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 467
Query: 65 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 122
G+ RGL L+ + N+I+ + D F L N+ +SL +NQI +++ + L L+
Sbjct: 468 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALS 527
Query: 123 YLYLSHN 129
L L N
Sbjct: 528 TLNLLAN 534
Score = 116 (45.9 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 38/127 (29%), Positives = 65/127 (51%)
Query: 82 NQITMVRRDE-FQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDI 139
N+I+++ F+ L +L I+L NN+++ + + + G ++ L+L+ NQL
Sbjct: 413 NEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMF 472
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLS 198
RGL LRT+ L N+I+ N+ G+ N+ L L N+I + GA + LS
Sbjct: 473 RGLDGLRTLMLRNNRISCI--HNDS---FTGLRNVRLLSLYDNQIATISPGAFDTLQALS 527
Query: 199 RLDLSHN 205
L+L N
Sbjct: 528 TLNLLAN 534
Score = 113 (44.8 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHN 205
T +L N N+ E + +T++ ++ L +N++ + DGA G +S L L+ N
Sbjct: 405 TAELRLNN-NEISIL-EATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTAN 462
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
+L +I F GLD L+ L + +N ++ + S T L + L + N + + F
Sbjct: 463 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDT 522
Query: 265 LPVLCKADLAHNNIKAINIQLA 286
L L +L N N QLA
Sbjct: 523 LQALSTLNLLANPFNC-NCQLA 543
Score = 98 (39.6 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
LT L + L+NN++ +E G + + L + NQLE++ S + + L +L NN
Sbjct: 427 LTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNN 486
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
RI+ + + GL +++ ++ NQI + F L L +++L N + N L+ L
Sbjct: 487 RISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPF-NCNCQLAWL 545
Score = 93 (37.8 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N+I +L + + + L+ L LS+N L+ I P F GL SL++L + N ++TL+E
Sbjct: 654 LSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEG 713
Query: 238 SKTFLPALEELFVSHNSL 255
+ +L L + N L
Sbjct: 714 IFADVTSLSHLAIGANPL 731
Score = 91 (37.1 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
N+ EL L N+ + G L L +DLS+NK+ ++S F + L L +S+N L
Sbjct: 625 NVTELYLDGNQFMLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 684
Query: 233 TLEETSKTFLPALEELFVSHNSLTRLDK 260
+ + L +L L + N ++ L +
Sbjct: 685 CIPPLAFQGLRSLRLLSLHGNDISTLQE 712
Score = 89 (36.4 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 69 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLS 127
RG T L+ +D NQI+ + F+ L L+ ++L NN I+++ SS + + KL L
Sbjct: 18 RGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLH 77
Query: 128 HNQL 131
N L
Sbjct: 78 SNHL 81
Score = 70 (29.7 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 140
N I + R F+ +L ++ L NQI+ + + L L L L++N ++ +
Sbjct: 7 NTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFN 66
Query: 141 GLKRLRTVDLSYNKI 155
+ +LRT L N +
Sbjct: 67 HMPKLRTFRLHSNHL 81
Score = 64 (27.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANN 58
G TDL L L+ N++ +E G L L++L + N + +P S +L + ++
Sbjct: 19 GATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHS 78
Query: 59 NRI 61
N +
Sbjct: 79 NHL 81
Score = 38 (18.4 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHG 333
+ LNS +Y+ G PV D A + +N ++ HG
Sbjct: 1140 YTLNSEAPLYVGGMPV---DVNSAAFRLWQILNGSS-FHG 1175
>UNIPROTKB|Q86UE6 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0035418 "protein
localization to synapse" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0060076 "excitatory synapse"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030426
"growth cone" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 EMBL:CH471053 GO:GO:0007610 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0035418 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG EMBL:AY182024
EMBL:AK056644 EMBL:AK290512 EMBL:AY358310 EMBL:BC045113
IPI:IPI00328716 RefSeq:NP_849161.2 UniGene:Hs.591580
ProteinModelPortal:Q86UE6 SMR:Q86UE6 MINT:MINT-7027295
STRING:Q86UE6 PhosphoSite:Q86UE6 DMDM:146330009 PRIDE:Q86UE6
DNASU:347730 Ensembl:ENST00000295057 Ensembl:ENST00000409148
Ensembl:ENST00000417012 Ensembl:ENST00000433224 GeneID:347730
KEGG:hsa:347730 UCSC:uc002sok.1 GeneCards:GC02M080427
H-InvDB:HIX0002207 HGNC:HGNC:19408 MIM:610867 neXtProt:NX_Q86UE6
PharmGKB:PA134887293 InParanoid:Q86UE6 OMA:EPDLFHG PhylomeDB:Q86UE6
GenomeRNAi:347730 NextBio:99250 ArrayExpress:Q86UE6 Bgee:Q86UE6
CleanEx:HS_LRRTM1 Genevestigator:Q86UE6 GermOnline:ENSG00000162951
Uniprot:Q86UE6
Length = 522
Score = 200 (75.5 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 67/235 (28%), Positives = 112/235 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL L WL+L++N + S++G L +++ L + NQ+ LP+ + L S+ +
Sbjct: 87 GLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSY 146
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 116
N++ +L L GL KL +M N I V FQ+ +L + + NQ+ S+ +S +
Sbjct: 147 NKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL KL L+L HN L + L L ++ L NK+ + + V N+ +
Sbjct: 207 GLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIV------VSSLDWVWNLEK 260
Query: 177 LKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
+ L NEIE ++ + + L L L N+L I P SL + ++ NL
Sbjct: 261 MDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWKSLTSITLAGNL 315
Score = 185 (70.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 64/243 (26%), Positives = 118/243 (48%)
Query: 25 LSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFN 82
LS L L + N L L + QL LY ++N I S+ G + L +++ + N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 83 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRG 141
QIT + F+ + NL S+ L N++ ++ L GL KL L++ N + + +
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQD 183
Query: 142 LKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGA----LMGIHGL 197
+ L+ +D+ YN++ +N G+ + EL L+HN++ ++ A L+ +H L
Sbjct: 184 CRSLKFLDIGYNQLKSLA-----RNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSL 238
Query: 198 SRLDLSHNKLR-TISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
L NK+ +S D++ +L+ +D+S N + +E +P L+ L + N LT
Sbjct: 239 C---LRRNKVAIVVSSLDWVW--NLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLT 293
Query: 257 RLD 259
++
Sbjct: 294 YIE 296
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 69/257 (26%), Positives = 119/257 (46%)
Query: 29 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMV 87
+LL E L P ++ S L L N ++ L G GL +L +D N I V
Sbjct: 48 RLLYCEALNLTEAPHNL---SGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSV 104
Query: 88 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 146
+ D FQ L + ++L +NQIT + N++ + L + LS+N+L D GL++L
Sbjct: 105 QGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLT 164
Query: 147 TVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHN 205
T+ + N I R Q ++ L + +N++++L + G+ L+ L L HN
Sbjct: 165 TLHMRANAIQFVPVRI-----FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHN 219
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHG 264
L ++ F L SL L + N + + +S ++ LE++ +S N + ++ F
Sbjct: 220 DLVKVNFAHFPRLISLHSLCLRRNKVAIVV-SSLDWVWNLEKMDLSGNEIEYMEPHVFET 278
Query: 265 LPVLCKADLAHNNIKAI 281
+P L L N + I
Sbjct: 279 VPHLQSLQLDSNRLTYI 295
Score = 170 (64.9 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 57/238 (23%), Positives = 111/238 (46%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
L+ L L L N L L GQ L +L L ++ N + ++ D Q ++ L ++N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 60 RITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SG 117
+IT L R + L+ ++ +N++ + D F L L ++ ++ N I + +
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQD 183
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L +L + +NQL + GL +L + L +N + K + + + ++ L
Sbjct: 184 CRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPR-----LISLHSL 238
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L+ N++ + +L + L ++DLS N++ + P F + L+ L + N LT +E
Sbjct: 239 CLRRNKVAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIE 296
Score = 144 (55.7 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 108 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQ 167
+T +LSGL L+ L +N L+E GL +L + L +N I +G +
Sbjct: 57 LTEAPHNLSGLLGLS---LRYNSLSELRAGQFTGLMQLTWLYLDHNHICSV----QG-DA 108
Query: 168 VQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDI 226
Q + + EL L N+I L + L +DLS+NKL+ ++PD F GL L L +
Sbjct: 109 FQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHM 168
Query: 227 SHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
N + + +L+ L + +N L L ++ F GL L + L HN++ +N
Sbjct: 169 RANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVN 225
Score = 127 (49.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 35/117 (29%), Positives = 60/117 (51%)
Query: 171 VTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
++ + L L++N + L G G+ L+ L L HN + ++ D F L +K L +S N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
+T L T+ +P L + +S+N L L D FHGL L + N I+ + +++
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI 180
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
E +L + E NL A + GL L L +N L + F GL L L + HN + +++
Sbjct: 46 EGRLLYCEALNLTEAPHNLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQ 105
Query: 236 ETSKTFLPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAI 281
+ L ++EL +S N +T+L + F +P L DL++N ++A+
Sbjct: 106 GDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQAL 152
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 204 (76.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 76/261 (29%), Positives = 120/261 (45%)
Query: 36 NQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQN 94
N EA+ SDI ++ L +N I L L+ L +++N I + F+
Sbjct: 93 NLTEAI-SDIPRYTT--HLNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFRG 149
Query: 95 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 154
L NL ++L N+I S+N+S GL+ L L LSHNQ+T D L +L+ + LS N
Sbjct: 150 LENLTLLNLVENKIQSVNNSFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNN 209
Query: 155 INKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDD 214
I+ F E VQ + + L L +N I LD + + L+ L NKLR ++
Sbjct: 210 ISDFSGILEA---VQHLPCLERLDLTNNSIMYLDHSPRSLVSLTHLSFEGNKLRELN-FS 265
Query: 215 FIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLA 274
+ L +L L S N ++ LP L+ L +S + + L L DL+
Sbjct: 266 ALSLPNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSGTVIKLENLSAKHLQNLRAMDLS 325
Query: 275 HNNIKAINIQLALKTQCQIFG 295
+ ++ + L +KT C + G
Sbjct: 326 NWELR--HGHLDMKTVCHLLG 344
Score = 193 (73.0 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 86/316 (27%), Positives = 137/316 (43%)
Query: 4 DL-NWLFLNNNR-LKSLEGQLGTLSKLQLLVIEQNQLEA-----LPSDIQL-FSQLGSLY 55
DL NW + + +K++ LG L KL+ LV ++N A L +L F LG
Sbjct: 323 DLSNWELRHGHLDMKTVCHLLGNLPKLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQ-- 380
Query: 56 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSS 114
N++ I D L LQ N++ Q++ + + +L NL S+ L +N+ S + +
Sbjct: 381 -NSDLIYLNDSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFA 439
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
S L L +L LS N +TE GL L+ ++L+ I + N+
Sbjct: 440 FSPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTID-----RYSFTQFPNL 494
Query: 175 FELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
L L N I L+ G + L L LSHN L+ + P+ F GL +L+ LD+ +N L+
Sbjct: 495 EVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSY 554
Query: 234 LEETSKTFLPALEELFVSHNSLT-RLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQ 292
E + L L L + N +T + P + L N++ + +
Sbjct: 555 FHEHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNF 614
Query: 293 IFGLNSTLRIYLEGNP 308
GL S + L NP
Sbjct: 615 FQGLGSLQELLLGKNP 630
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 65/287 (22%), Positives = 127/287 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
GL +L L L N+++S+ LS L+ L++ NQ+ + D +L L + N
Sbjct: 149 GLENLTLLNLVENKIQSVNNSFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRN 208
Query: 60 RITSLDGLLRGLTKLQVFN-MDFNQITMVRRDEF-QNLHNLDSISLQNNQITSMNSSLSG 117
I+ G+L + L +D +++ D ++L +L +S + N++ +N S
Sbjct: 209 NISDFSGILEAVQHLPCLERLDLTNNSIMYLDHSPRSLVSLTHLSFEGNKLRELNFSALS 268
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN--KINKFGTRNEGKNQVQGVTNIF 175
L L L S N ++ L +L++++LS K+ ++ + ++N +
Sbjct: 269 LPNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSGTVIKLENLSAKHLQNLRAMDLSN-W 327
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL-LTTL 234
EL+ H +++ + L + L L N L LD+ N L L
Sbjct: 328 ELRHGHLDMKTVCHLLGNLPKLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYL 387
Query: 235 EETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNIKA 280
++ LP+L++L ++ L+ ++ + + L L DL+HN K+
Sbjct: 388 NDSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKS 434
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 91/324 (28%), Positives = 140/324 (43%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
L +L L L++N+ KS + L L+ L + +N + L + FS L +L N
Sbjct: 419 LQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNN--LAFSGLFALKELNLA 476
Query: 61 ---ITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSL 115
I ++D L+V ++ N I + F+ L L S+ L +N + + +S
Sbjct: 477 ACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSF 536
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
SGLT L L L +N L+ F GL++L + L +NKI TR + ++
Sbjct: 537 SGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLK 596
Query: 176 ELKL--QHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL- 231
+L L Q + I+ + G+ L L L N + F L +L LDIS
Sbjct: 597 QLNLEGQRHGIQVVPSNFFQGLGSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDG 656
Query: 232 -TTLEETSKTF--LPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLAL 287
+L + F L L+ L + +N+L L D F L L L NN+K IN Q L
Sbjct: 657 DRSLYLNASLFQNLKRLKILRLENNNLESLVPDMFSSLQSLQVFSLRFNNLKVIN-QSHL 715
Query: 288 KTQCQIFGLNSTLRIYLEGNPVLC 311
K L S + + GN + C
Sbjct: 716 KN------LKSLMFFDVYGNKLQC 733
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 75/284 (26%), Positives = 122/284 (42%)
Query: 12 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRG 70
N+ K EG L L LL + +N+++++ + + S L +L ++N+IT +
Sbjct: 137 NSIWKIDEGAFRGLENLTLLNLVENKIQSVNNSFEGLSSLKTLLLSHNQITHIHKDAFTP 196
Query: 71 LTKLQVFNMDFNQITMVRR--DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 128
L KL+ ++ N I+ + Q+L L+ + L NN I ++ S L L +L
Sbjct: 197 LIKLKYLSLSRNNISDFSGILEAVQHLPCLERLDLTNNSIMYLDHSPRSLVSLTHLSFEG 256
Query: 129 NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN--EIEN 186
N+L E + L L + S N NK +N ++ + + L L ++EN
Sbjct: 257 NKLRELNFSAL-SLPNLTNLSASRNG-NKV-IQNV---YLKTLPQLKSLNLSGTVIKLEN 310
Query: 187 LDGA-LMGIHG--LSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKTFL 242
L L + LS +L H L + +G L L+ L N+ T E K
Sbjct: 311 LSAKHLQNLRAMDLSNWELRHGHLDMKTVCHLLGNLPKLETLVFQKNV--TNAEGIKQLA 368
Query: 243 PALEELFVS--HNS-LTRL-DKDFHGLPVLCKADLAHNNIKAIN 282
LF+ NS L L D +F+ LP L K +L + IN
Sbjct: 369 KCTRLLFLDLGQNSDLIYLNDSEFNALPSLQKLNLNKCQLSFIN 412
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 202 (76.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 65/248 (26%), Positives = 123/248 (49%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 90
++ + +L +P+ I + ++ +L N+ ++ D + L L++ + N + +
Sbjct: 72 VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTD-TFKHLRHLEILQLSKNLVRKIEVG 130
Query: 91 EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
F L +L+++ L +N++T++ + L+KL L+L +N + + LR +D
Sbjct: 131 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 190
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRT 209
L ++ + +E +G+ N+ L L ++++ L + L L+LS N+L
Sbjct: 191 LG--ELKRLEYISEAA--FEGLVNLRYLNLGMCNLKDIPN-LTALVRLEELELSGNRLDL 245
Query: 210 ISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVL 268
I P F GL SL+ L + H + T+E + L +LEEL +SHN+L L D F L L
Sbjct: 246 IRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRL 305
Query: 269 CKADLAHN 276
+ L HN
Sbjct: 306 ERVHLNHN 313
Score = 157 (60.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 66/255 (25%), Positives = 119/255 (46%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 136
N+ N I ++R D F++L +L+ + L N + + + +GL L L L N+LT
Sbjct: 94 NLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 153
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHG 196
L +LR + L N I + N+V + + +L+ E + + A G+
Sbjct: 154 QAFEYLSKLRELWLRNNPIESIPSY--AFNRVPSLRRLDLGELKRLEYIS-EAAFEGLVN 210
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
L L+L L+ I P+ L L+ L++S N L + S L +L +L++ H +
Sbjct: 211 LRYLNLGMCNLKDI-PN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVA 268
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCD-DS 314
++++ F L L + +L+HNN+ ++ L L+ R++L NP C+ D
Sbjct: 269 TIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP-------LHRLERVHLNHNPWHCNCDV 321
Query: 315 MRAVIDAMETINNNT 329
+ ET+ +NT
Sbjct: 322 LWLSWWLKETVPSNT 336
Score = 127 (49.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 46/162 (28%), Positives = 76/162 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL LN L L +NRL ++ Q LSKL+ L + N +E++PS F+++ SL
Sbjct: 134 GLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS--YAFNRVPSLRRLDL 191
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R+ + + GL L+ N+ + + L L+ + L N++ +
Sbjct: 192 GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPG 249
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GLT L L+L H Q+ + LK L ++LS+N +
Sbjct: 250 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 291
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 202 (76.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 65/248 (26%), Positives = 123/248 (49%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 90
++ + +L +P+ I + ++ +L N+ ++ D + L L++ + N + +
Sbjct: 72 VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTD-TFKHLRHLEILQLSKNLVRKIEVG 130
Query: 91 EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
F L +L+++ L +N++T++ + L+KL L+L +N + + LR +D
Sbjct: 131 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 190
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRT 209
L ++ + +E +G+ N+ L L ++++ L + L L+LS N+L
Sbjct: 191 LG--ELKRLEYISEAA--FEGLVNLRYLNLGMCNLKDIPN-LTALVRLEELELSGNRLDL 245
Query: 210 ISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVL 268
I P F GL SL+ L + H + T+E + L +LEEL +SHN+L L D F L L
Sbjct: 246 IRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRL 305
Query: 269 CKADLAHN 276
+ L HN
Sbjct: 306 ERVHLNHN 313
Score = 157 (60.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 66/255 (25%), Positives = 119/255 (46%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 136
N+ N I ++R D F++L +L+ + L N + + + +GL L L L N+LT
Sbjct: 94 NLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 153
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHG 196
L +LR + L N I + N+V + + +L+ E + + A G+
Sbjct: 154 QAFEYLSKLRELWLRNNPIESIPSY--AFNRVPSLRRLDLGELKRLEYIS-EAAFEGLVN 210
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
L L+L L+ I P+ L L+ L++S N L + S L +L +L++ H +
Sbjct: 211 LRYLNLGMCNLKDI-PN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVA 268
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCD-DS 314
++++ F L L + +L+HNN+ ++ L L+ R++L NP C+ D
Sbjct: 269 TIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP-------LHRLERVHLNHNPWHCNCDV 321
Query: 315 MRAVIDAMETINNNT 329
+ ET+ +NT
Sbjct: 322 LWLSWWLKETVPSNT 336
Score = 127 (49.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 46/162 (28%), Positives = 76/162 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL LN L L +NRL ++ Q LSKL+ L + N +E++PS F+++ SL
Sbjct: 134 GLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS--YAFNRVPSLRRLDL 191
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R+ + + GL L+ N+ + + L L+ + L N++ +
Sbjct: 192 GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPG 249
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GLT L L+L H Q+ + LK L ++LS+N +
Sbjct: 250 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 291
>RGD|1561361 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1561361 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:LQADYNY OrthoDB:EOG4GTKC9
IPI:IPI00361290 Ensembl:ENSRNOT00000015401 Uniprot:D3ZK41
Length = 846
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 51/174 (29%), Positives = 86/174 (49%)
Query: 166 NQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
N+ +N L L +N ++ + GA G+ L RL L++NKL + D F+GL+SL+ L
Sbjct: 80 NEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYL 139
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQ 284
+N ++T+E + + L L+ L ++ N L L + +L DL N +K +
Sbjct: 140 QADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMPFA 199
Query: 285 LALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQ 338
L+ I G+ + I LE NP C + + ++TI T GE +C+
Sbjct: 200 GVLE---HIGGI---MEIQLEENPWNCTCDLLPLKAWLDTI---TVFVGEIVCE 244
Score = 135 (52.6 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 165 KNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKM 223
KN + T++ L L +N I + +GA + L RL L+ N L + P F GL SL+
Sbjct: 393 KNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQY 452
Query: 224 LDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI 283
L + +N++ ++ + L L+ LF+++N L L + G L + +L +N+ + +
Sbjct: 453 LYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNNHFSHLPV 512
Query: 284 QLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQ 338
+ L Q F ++I L+ NP C + + D E N+ I+ E C+
Sbjct: 513 KGVLD-QLPAF-----IQIDLQENPWDCTCDIMGLKDWTEHANSPVIIN-EVTCE 560
Score = 118 (46.6 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 40/153 (26%), Positives = 68/153 (44%)
Query: 8 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL- 64
LFLN N L L + S L + N L+ + P L L+ NNN++ L
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
+ GL L+ D+N I+ + F L+ L + L +N + S+ S++ L +L
Sbjct: 127 EDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVLLTHL 186
Query: 125 YLSHNQLTEF----LLDDIRGLKRLRTVDLSYN 153
L N+L +L+ I G+ ++ + +N
Sbjct: 187 DLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWN 219
Score = 108 (43.1 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 48/187 (25%), Positives = 84/187 (44%)
Query: 93 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 152
Q+ N +++ Q + T+++ T LYL+ N L +D L ++DL +
Sbjct: 350 QSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKND---LLEYTSLDLLH 406
Query: 153 NKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTIS 211
N+ EG +T++ L L N +E L ++ G+ L L L +N ++ I
Sbjct: 407 LGNNRIAVIQEGA--FTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIK 464
Query: 212 PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD--FHGLPVLC 269
P F L +L++L +++NLL +L + AL L + +N + L LP
Sbjct: 465 PLTFDALINLQLLFLNNNLLRSLPDNIFGGT-ALTRLNLRNNHFSHLPVKGVLDQLPAFI 523
Query: 270 KADLAHN 276
+ DL N
Sbjct: 524 QIDLQEN 530
Score = 65 (27.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYAN 57
GL L L LNNN+L+ L LG L L+ L + N + + + ++L L N
Sbjct: 108 GLKTLKRLHLNNNKLEVLREDTFLG-LESLEYLQADYNYISTIEAGAFSKLNKLKVLILN 166
Query: 58 NNRITSLDGLLRGLTKLQVFNMDFNQI-TMVRRDEFQNLHNLDSISLQNN 106
+N + SL + L ++ N++ M +++ + I L+ N
Sbjct: 167 DNLLLSLPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN 216
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 196 (74.1 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 62/228 (27%), Positives = 106/228 (46%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 97
L A P + S L + + L + + K ++ N+ N ++ + F+ + N
Sbjct: 20 LAACPQNCHCHSDLQHVICDK---VGLQKIPKVSEKTKLLNLQRNNFPVLAANSFRAMPN 76
Query: 98 LDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
L S+ LQ+ QI + + + GL +L YLYLSHN + L L + L +NK+
Sbjct: 77 LVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVT 136
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDF 215
+ + + + N+F L+L +N+I L GA G L L LS N L ++ P
Sbjct: 137 ELP-----RGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGAL 191
Query: 216 IGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDF 262
+++L + N L++ + + L +EEL +SHN L + D F
Sbjct: 192 DDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAF 239
Score = 175 (66.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 64/211 (30%), Positives = 102/211 (48%)
Query: 50 QLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 108
QL LY ++N I L G LT+L +D N++T + R L NL + L NN+I
Sbjct: 100 QLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKI 159
Query: 109 TSMNS-SLSGLTKLAYLYLSHNQLTEF---LLDDIRGLKRLRTVDLSYNKINKFGTRNEG 164
+ + + G L +LYLS N L+ LDD+ L + VD N+++ + +
Sbjct: 160 RELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFH-VDR--NQLSSYPSAALS 216
Query: 165 KNQVQGVTNIFELKLQHNEIENL-DGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLK 222
K +V + ELKL HN ++++ D A L L L + L S F+G+ +LK
Sbjct: 217 KLRV-----VEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLK 271
Query: 223 MLDISHNLLTTLEETSKTFLPALEELFVSHN 253
+ + +N L L S +LE L +++N
Sbjct: 272 HVHLENNRLNQLP--SNFPFDSLETLALTNN 300
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 59/212 (27%), Positives = 101/212 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA--- 56
GL L +L+L++N ++ L G L++L L ++ N++ LP L S L +L+
Sbjct: 97 GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRG--LLSPLVNLFILQL 154
Query: 57 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS- 114
NNN+I L G +G L+ + N ++ ++ ++ NL + NQ++S S+
Sbjct: 155 NNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAA 214
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKR-LRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
LS L + L LSHN L + + R L T+ L + KF ++G GVT
Sbjct: 215 LSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKF---SDGA--FLGVTT 269
Query: 174 IFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+ + L++N + L L L L++N
Sbjct: 270 LKHVHLENNRLNQLPSNFP-FDSLETLALTNN 300
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
G DL WL+L+ N L SL+ G L + L +++NQL + PS + + L ++
Sbjct: 169 GAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSH 228
Query: 59 NRITSL-DGLLRGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
N + S+ D + + L+ +D + F + L + L+NN++ + S+
Sbjct: 229 NPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQLPSNFP 288
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKR 144
L L L++N +RGL+R
Sbjct: 289 -FDSLETLALTNNPWK--CTCQLRGLRR 313
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 196 (74.1 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 62/228 (27%), Positives = 106/228 (46%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 97
L A P + S L + + L + + K ++ N+ N ++ + F+ + N
Sbjct: 22 LAACPQNCHCHSDLQHVICDK---VGLQKIPKVSEKTKLLNLQRNNFPVLATNSFRAMPN 78
Query: 98 LDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
L S+ LQ+ QI + + + GL +L YLYLSHN + L L + L +NK+
Sbjct: 79 LVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVT 138
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDF 215
+ + + + N+F L+L +N+I L GA G L L LS N L ++ P
Sbjct: 139 ELP-----RGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGAL 193
Query: 216 IGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL-DKDF 262
+++L + N L++ + + L +EEL +SHN L + D F
Sbjct: 194 DDVENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAF 241
Score = 176 (67.0 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 64/211 (30%), Positives = 101/211 (47%)
Query: 50 QLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 108
QL LY ++N I L G LT+L +D N++T + R L NL + L NN+I
Sbjct: 102 QLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKI 161
Query: 109 TSMNS-SLSGLTKLAYLYLSHNQLTEF---LLDDIRGLKRLRTVDLSYNKINKFGTRNEG 164
+ S + G L +LYLS N L+ LDD+ L + L N+++ + +
Sbjct: 162 RELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFY---LDRNQLSSYPSAALS 218
Query: 165 KNQVQGVTNIFELKLQHNEIENL-DGALMGI-HGLSRLDLSHNKLRTISPDDFIGLDSLK 222
K +V + ELKL HN ++++ D A L L L + L S F+G+ +LK
Sbjct: 219 KLRV-----VEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLK 273
Query: 223 MLDISHNLLTTLEETSKTFLPALEELFVSHN 253
+ + +N L L S +LE L +++N
Sbjct: 274 HVHLENNRLHQLP--SNFPFDSLETLTLTNN 302
Score = 161 (61.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 60/212 (28%), Positives = 101/212 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA--- 56
GL L +L+L++N ++ L G L++L L ++ N++ LP L S L +L+
Sbjct: 99 GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRG--LLSPLVNLFILQL 156
Query: 57 NNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS- 114
NNN+I L G +G L+ + N ++ ++ ++ NL L NQ++S S+
Sbjct: 157 NNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAA 216
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKR-LRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
LS L + L LSHN L + + R L T+ L + KF ++G GVT
Sbjct: 217 LSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKF---SDGA--FLGVTT 271
Query: 174 IFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+ + L++N + L L L L++N
Sbjct: 272 LKHVHLENNRLHQLPSNFP-FDSLETLTLTNN 302
>UNIPROTKB|F1SUE4 [details] [associations]
symbol:ASPN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070171 "negative regulation of tooth mineralization"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030282 "bone mineralization" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005578 GO:GO:0005509 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030282
GeneTree:ENSGT00700000104006 OMA:LCSAKPL GO:GO:0070171
GO:GO:0030512 InterPro:IPR016352 PIRSF:PIRSF002490 EMBL:CU855543
EMBL:FP312776 Ensembl:ENSSSCT00000008845 ArrayExpress:F1SUE4
Uniprot:F1SUE4
Length = 370
Score = 196 (74.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 57/247 (23%), Positives = 118/247 (47%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 96
L ++PS+I +++ L NN+I + + +GLT L ++ N++T + F
Sbjct: 83 LSSVPSNIPFDTRMVDL--QNNKIKEIKENDFKGLTSLYALILNNNKLTKIHPKAFLTTK 140
Query: 97 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 156
L + L +NQ++ + +L LA L + N++ + + +G+ L +++S N ++
Sbjct: 141 KLRRLYLSHNQLSEIPLNLP--KSLAELRIHENKVKKIQKETFKGMNALHVLEMSANPLD 198
Query: 157 KFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFI 216
G +GVT +F +++ ++ ++ L L L L +NK+ T+ +DF
Sbjct: 199 NNGIE---PGAFEGVT-VFHIRIAEAKLTSIPKELPST--LLELHLDYNKISTVELEDFK 252
Query: 217 GLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHN 276
L+ L + +N +T +E S +P + E+ + +N L ++ L L L N
Sbjct: 253 RYKELQRLGLGNNRITDIENGSLANIPRVREIHLENNKLKKIPSGLQELKYLQIIFLHSN 312
Query: 277 NIKAINI 283
+I + +
Sbjct: 313 SITKVGV 319
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 53/219 (24%), Positives = 101/219 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLG-TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
GLT L L LNNN+L + + T KL+ L + NQL +P + L L L + N
Sbjct: 114 GLTSLYALILNNNKLTKIHPKAFLTTKKLRRLYLSHNQLSEIP--LNLPKSLAELRIHEN 171
Query: 60 RITSLDG-LLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
++ + +G+ L V M N + + F+ + + I + ++TS+ L
Sbjct: 172 KVKKIQKETFKGMNALHVLEMSANPLDNNGIEPGAFEGV-TVFHIRIAEAKLTSIPKELP 230
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
+ L L+L +N+++ L+D + K L+ + L N+I G + + + E
Sbjct: 231 --STLLELHLDYNKISTVELEDFKRYKELQRLGLGNNRITDI---ENGS--LANIPRVRE 283
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDF 215
+ L++N+++ + L + L + L N + + +DF
Sbjct: 284 IHLENNKLKKIPSGLQELKYLQIIFLHSNSITKVGVNDF 322
>UNIPROTKB|O60938 [details] [associations]
symbol:KERA "Keratocan" species:9606 "Homo sapiens"
[GO:0007601 "visual perception" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0061303 "cornea development in
camera-type eye" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0018146 "keratan sulfate biosynthetic process" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0042339 "keratan sulfate metabolic process" evidence=TAS]
[GO:0042340 "keratan sulfate catabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001611 PROSITE:PS51450 Reactome:REACT_116125
GO:GO:0005975 GO:GO:0007601 GO:GO:0005578 eggNOG:COG4886
GO:GO:0050896 GO:GO:0043202 GO:GO:0005796 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0061303 GO:GO:0018146
GO:GO:0042340 HOGENOM:HOG000234447 HOVERGEN:HBG108061 CTD:11081
KO:K08123 OrthoDB:EOG4KSPK3 OMA:RWINLNK EMBL:AF065988 EMBL:AF063301
EMBL:AF205403 EMBL:BC032667 IPI:IPI00013049 RefSeq:NP_008966.1
UniGene:Hs.125750 ProteinModelPortal:O60938 SMR:O60938
STRING:O60938 PhosphoSite:O60938 PRIDE:O60938 DNASU:11081
Ensembl:ENST00000266719 GeneID:11081 KEGG:hsa:11081 UCSC:uc001tbl.3
GeneCards:GC12M091377 HGNC:HGNC:6309 HPA:HPA039321 MIM:217300
MIM:603288 neXtProt:NX_O60938 Orphanet:53691 PharmGKB:PA30088
InParanoid:O60938 PhylomeDB:O60938 GenomeRNAi:11081 NextBio:42130
Bgee:O60938 CleanEx:HS_KERA Genevestigator:O60938
GermOnline:ENSG00000139330 Uniprot:O60938
Length = 352
Score = 195 (73.7 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 56/215 (26%), Positives = 108/215 (50%)
Query: 3 TDLNWLFLNNNRLKSL---EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
T L W+ LN N++ + +G L L KL L +E N+LE +PS + L L N
Sbjct: 95 TQLRWINLNKNKITNYGIEKGALSQLKKLLFLFLEDNELEEVPSPLP--RSLEQLQLARN 152
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQIT--MVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
+++ + G L L + ++ N++ +RD F+ L NL +++ N + +M L
Sbjct: 153 KVSRIPQGTFSNLENLTLLDLQNNKLVDNAFQRDTFKGLKNLMQLNMAKNALRNMPPRLP 212
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
T L+L +N + + + ++ + L++NK++ G + G + V++I +
Sbjct: 213 ANTM--QLFLDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDEGLPSRGFD----VSSILD 266
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
L+L HN++ + + H L L L HNK+++++
Sbjct: 267 LQLSHNQLTKVPR--ISAH-LQHLHLDHNKIKSVN 298
Score = 177 (67.4 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 72/292 (24%), Positives = 136/292 (46%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITM--V 87
L E L+ +P+ + S++ LY NN I ++ + T+L+ N++ N+IT +
Sbjct: 56 LYCENRGLKEIPA---IPSRIWYLYLQNNLIETIPEKPFENATQLRWINLNKNKITNYGI 112
Query: 88 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
+ L L + L++N++ + S L L L L+ N+++ L+ L
Sbjct: 113 EKGALSQLKKLLFLFLEDNELEEVPSPLP--RSLEQLQLARNKVSRIPQGTFSNLENLTL 170
Query: 148 VDLSYNKI--NKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
+DL NK+ N F ++ +G+ N+ +L + N + N+ L +L L +N
Sbjct: 171 LDLQNNKLVDNAFQ-----RDTFKGLKNLMQLNMAKNALRNMPPRLPA--NTMQLFLDNN 223
Query: 206 KLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF-LPALEELFVSHNSLTRLDKDFHG 264
+ I + F + + L ++HN L+ S+ F + ++ +L +SHN LT++ +
Sbjct: 224 SIEGIPENYFNVIPKVAFLRLNHNKLSDEGLPSRGFDVSSILDLQLSHNQLTKVPRISAH 283
Query: 265 LPVLCKADLAHNNIKAINIQLA------LKTQCQIFGLNSTLR-IYLEGNPV 309
L L L HN IK++N+ + L + F LR + L+GN +
Sbjct: 284 LQHL---HLDHNKIKSVNVSVICPSPSMLPAERDSFSYGPHLRYLRLDGNEI 332
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 68/273 (24%), Positives = 119/273 (43%)
Query: 7 WLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRIT 62
+L+L NN ++++ E ++L+ + + +N++ + SQL L + +N +
Sbjct: 75 YLYLQNNLIETIPEKPFENATQLRWINLNKNKITNYGIEKGALSQLKKLLFLFLEDNELE 134
Query: 63 SLDGLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS---MNSSLSGL 118
+ L R L +LQ+ N+++ + + F NL NL + LQNN++ + GL
Sbjct: 135 EVPSPLPRSLEQLQLAR---NKVSRIPQGTFSNLENLTLLDLQNNKLVDNAFQRDTFKGL 191
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN--EG--KNQVQGVTNI 174
L L ++ N L R L N + F N EG +N + +
Sbjct: 192 KNLMQLNMAKNAL------------RNMPPRLPANTMQLFLDNNSIEGIPENYFNVIPKV 239
Query: 175 FELKLQHNEI--ENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
L+L HN++ E L + + L LSHN+L + P I L+ L + HN +
Sbjct: 240 AFLRLNHNKLSDEGLPSRGFDVSSILDLQLSHNQLTKV-PR--ISAH-LQHLHLDHNKIK 295
Query: 233 TLEET----SKTFLPALEELFV--SHNSLTRLD 259
++ + S + LPA + F H RLD
Sbjct: 296 SVNVSVICPSPSMLPAERDSFSYGPHLRYLRLD 328
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 201 (75.8 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 65/248 (26%), Positives = 122/248 (49%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 90
++ + +L +P+ I + ++ +L N ++ D + L L++ + N + +
Sbjct: 70 VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTD-TFKHLRHLEILQLSKNLVRKIEVG 128
Query: 91 EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
F L +L+++ L +N++T++ + L+KL L+L +N + + LR +D
Sbjct: 129 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 188
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRT 209
L ++ + +E +G+ N+ L L ++++ L + L L+LS N+L
Sbjct: 189 LG--ELKRLEYISEAA--FEGLVNLRYLNLGMCNLKDIPN-LTALVRLEELELSGNRLDL 243
Query: 210 ISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVL 268
I P F GL SL+ L + H + T+E + L +LEEL +SHN+L L D F L L
Sbjct: 244 IRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRL 303
Query: 269 CKADLAHN 276
+ L HN
Sbjct: 304 ERVHLNHN 311
Score = 155 (59.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 66/255 (25%), Positives = 119/255 (46%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 136
N+ N I ++R D F++L +L+ + L N + + + +GL L L L N+LT
Sbjct: 92 NLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 151
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHG 196
L +LR + L N I + N+V + + +L+ E + + A G+
Sbjct: 152 QAFEYLSKLRELWLRNNPIESIPSY--AFNRVPSLRRLDLGELKRLEYIS-EAAFEGLVN 208
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
L L+L L+ I P+ L L+ L++S N L + S L +L +L++ H +
Sbjct: 209 LRYLNLGMCNLKDI-PN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVA 266
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCD-DS 314
++++ F L L + +L+HNN+ ++ L L+ R++L NP C+ D
Sbjct: 267 TIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP-------LHRLERVHLNHNPWHCNCDV 319
Query: 315 MRAVIDAMETINNNT 329
+ ET+ +NT
Sbjct: 320 LWLSWWLKETVPSNT 334
Score = 127 (49.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 46/162 (28%), Positives = 76/162 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL LN L L +NRL ++ Q LSKL+ L + N +E++PS F+++ SL
Sbjct: 132 GLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS--YAFNRVPSLRRLDL 189
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R+ + + GL L+ N+ + + L L+ + L N++ +
Sbjct: 190 GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPG 247
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GLT L L+L H Q+ + LK L ++LS+N +
Sbjct: 248 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 289
>DICTYBASE|DDB_G0276371 [details] [associations]
symbol:gefL "Ras guanine nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0046956 "positive phototaxis"
evidence=IMP] [GO:0043052 "thermotaxis" evidence=IMP] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0030036 "actin cytoskeleton organization"
evidence=IEA] [GO:0017048 "Rho GTPase binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000651 InterPro:IPR001895
InterPro:IPR010473 InterPro:IPR016024 Pfam:PF00617 Pfam:PF00618
Pfam:PF06371 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50212
PROSITE:PS51450 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0276371
GO:GO:0007264 SUPFAM:SSF48371 GO:GO:0030036 InterPro:IPR003591
SMART:SM00369 GO:GO:0051056 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0030587 GO:GO:0005622 GO:GO:0005085
GO:GO:0046956 Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
InterPro:IPR014768 PROSITE:PS51232 eggNOG:KOG3417 GO:GO:0043052
EMBL:AY160101 RefSeq:XP_643190.2 ProteinModelPortal:B0M0P8
STRING:B0M0P8 EnsemblProtists:DDB0185197 GeneID:8620463
KEGG:ddi:DDB_G0276371 Uniprot:B0M0P8
Length = 2356
Score = 207 (77.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 77/258 (29%), Positives = 126/258 (48%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT L L L+ N+L ++ +L +L ++ L +++NQ PS + +L +L +NN +
Sbjct: 115 LTTLRLLDLSGNQLGTIPVRLFSLVSMRELYLDENQFSNFPSHLCELQKLTTLGFSNNLL 174
Query: 62 TSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG- 117
S+ G + GL KL + I M E NL +L + +N ++S+ + L
Sbjct: 175 KSIPTQIGQMIGLKKLILSGNQMESIPM----EISNLKSLTHLDCSSNILSSIPNELGNK 230
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
L++L++L+L HN+L + D+I + L ++ L+ N I ++ G+ + N+ EL
Sbjct: 231 LSQLSFLFLQHNKLRS-IPDEIGQCQSLVSLRLNNNSITLL-PQSIGE-----LENLQEL 283
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE- 236
LQ N + L L L +L L NKL + PD F L L +L + NLL L
Sbjct: 284 YLQENRLNTLPSELGNCCSLKKLYLEFNKLIAL-PDRFKRLHCLNVLSLHDNLLDDLPNF 342
Query: 237 TSKTFLPALEELFVSHNS 254
S F L F HN+
Sbjct: 343 LSLEFSQHLIR-FTIHNN 359
Score = 202 (76.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 79/278 (28%), Positives = 133/278 (47%)
Query: 8 LFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 66
+ + + RLK L G++ +L L+ L IE N+++ +P+ QL QL L NN I
Sbjct: 52 VIIKSCRLKVLPGEISSLGGHLKKLHIEDNKIQEIPNLEQL-EQLEELILPNNDIAKFQV 110
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 126
+ LT L++ ++ NQ+ + F +L ++ + L NQ ++ S L L KL L
Sbjct: 111 SISKLTTLRLLDLSGNQLGTIPVRLF-SLVSMRELYLDENQFSNFPSHLCELQKLTTLGF 169
Query: 127 SHNQLTEF--LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEI 184
S+N L + + GLK+L LS N++ ++ + ++ L N +
Sbjct: 170 SNNLLKSIPTQIGQMIGLKKLI---LSGNQMESIPM------EISNLKSLTHLDCSSNIL 220
Query: 185 ENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
++ L + LS L L HNKLR+I PD+ SL L +++N +T L ++ L
Sbjct: 221 SSIPNELGNKLSQLSFLFLQHNKLRSI-PDEIGQCQSLVSLRLNNNSITLLPQSIGE-LE 278
Query: 244 ALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L+EL++ N L L + L K L N + A+
Sbjct: 279 NLQELYLQENRLNTLPSELGNCCSLKKLYLEFNKLIAL 316
Score = 177 (67.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 69/259 (26%), Positives = 113/259 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS--QLGSLYANNN 59
L L L L NN + + + L+ L+LL + NQL +P ++LFS + LY + N
Sbjct: 92 LEQLEELILPNNDIAKFQVSISKLTTLRLLDLSGNQLGTIP--VRLFSLVSMRELYLDEN 149
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 119
+ ++ L L KL N + + Q + L + L NQ+ S+ +S L
Sbjct: 150 QFSNFPSHLCELQKLTTLGFSNNLLKSIPTQIGQMI-GLKKLILSGNQMESIPMEISNLK 208
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
L +L S N L+ + L +L + L +NK+ +++ ++ L+L
Sbjct: 209 SLTHLDCSSNILSSIPNELGNKLSQLSFLFLQHNKLRSI------PDEIGQCQSLVSLRL 262
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
+N I L ++ + L L L N+L T+ P + SLK L + N L L + K
Sbjct: 263 NNNSITLLPQSIGELENLQELYLQENRLNTL-PSELGNCCSLKKLYLEFNKLIALPDRFK 321
Query: 240 TFLPALEELFVSHNSLTRL 258
L L L + N L L
Sbjct: 322 R-LHCLNVLSLHDNLLDDL 339
Score = 171 (65.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
L+ L++LFL +N+L+S+ ++G L L + N + LP I L LY NR+
Sbjct: 231 LSQLSFLFLQHNKLRSIPDEIGQCQSLVSLRLNNNSITLLPQSIGELENLQELYLQENRL 290
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS-GLTK 120
+L L L+ ++FN++ + D F+ LH L+ +SL +N + + + LS ++
Sbjct: 291 NTLPSELGNCCSLKKLYLEFNKLIALP-DRFKRLHCLNVLSLHDNLLDDLPNFLSLEFSQ 349
Query: 121 LAYLYLSHNQ--LTEFLLDDIRGLKRLRTVDLSY-NKINKFGTRNEGKN 166
+ HN L E +D I L+ L + LS N IN +N+ N
Sbjct: 350 HLIRFTIHNNPFLRENGIDVIDSLQFLNSHLLSIQNFINNHDQQNDNSN 398
Score = 168 (64.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 72/284 (25%), Positives = 132/284 (46%)
Query: 31 LVIEQNQLEALPSDIQ-LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 89
++I+ +L+ LP +I L L L+ +N+I + L + L +L+ + N I +
Sbjct: 52 VIIKSCRLKVLPGEISSLGGHLKKLHIEDNKIQEIPNLEQ-LEQLEELILPNNDIAKFQV 110
Query: 90 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
L L + L NQ+ ++ L L + LYL NQ + F + L++L T+
Sbjct: 111 S-ISKLTTLRLLDLSGNQLGTIPVRLFSLVSMRELYLDENQFSNFP-SHLCELQKLTTLG 168
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRT 209
S N + T Q+ + + +L L N++E++ + + L+ LD S N L +
Sbjct: 169 FSNNLLKSIPT------QIGQMIGLKKLILSGNQMESIPMEISNLKSLTHLDCSSNILSS 222
Query: 210 ISPDDFIG--LDSLKMLDISHNLLTTL-EETSKTFLPALEELFVSHNSLTRLDKDFHGLP 266
I P++ +G L L L + HN L ++ +E + +L L +++NS+T L + L
Sbjct: 223 I-PNE-LGNKLSQLSFLFLQHNKLRSIPDEIGQC--QSLVSLRLNNNSITLLPQSIGELE 278
Query: 267 VLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVL 310
L + L N + + +L C S ++YLE N ++
Sbjct: 279 NLQELYLQENRLNTLPSELG--NCC------SLKKLYLEFNKLI 314
Score = 163 (62.4 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 69/267 (25%), Positives = 120/267 (44%)
Query: 16 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG---SLYANNNRITSLDGLLRGLT 72
K EG L K + ++ + P I+L G ++ + R+ L G + L
Sbjct: 11 KLFEGSLSKDGKTSRIEHQKIKQSGCPLLIKLMKDNGHITNVIIKSCRLKVLPGEISSLG 70
Query: 73 -KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 131
L+ +++ N+I + + L L+ + L NN I S+S LT L L LS NQL
Sbjct: 71 GHLKKLHIEDNKIQEI--PNLEQLEQLEELILPNNDIAKFQVSISKLTTLRLLDLSGNQL 128
Query: 132 TEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGAL 191
+ + L +R + L N+ + F + ++Q +T L +N ++++ +
Sbjct: 129 GTIPVR-LFSLVSMRELYLDENQFSNFPSH---LCELQKLTT---LGFSNNLLKSIPTQI 181
Query: 192 MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVS 251
+ GL +L LS N++ +I P + L SL LD S N+L+++ L L LF+
Sbjct: 182 GQMIGLKKLILSGNQMESI-PMEISNLKSLTHLDCSSNILSSIPNELGNKLSQLSFLFLQ 240
Query: 252 HNSLTRLDKDFHGLPVLCKADLAHNNI 278
HN L + + L L +N+I
Sbjct: 241 HNKLRSIPDEIGQCQSLVSLRLNNNSI 267
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 201 (75.8 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 65/248 (26%), Positives = 122/248 (49%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 90
++ + +L +P+ I + ++ +L N ++ D + L L++ + N + +
Sbjct: 70 VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTD-TFKHLRHLEILQLSKNLVRKIEVG 128
Query: 91 EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
F L +L+++ L +N++T++ + L+KL L+L +N + + LR +D
Sbjct: 129 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 188
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRT 209
L ++ + +E +G+ N+ L L ++++ L + L L+LS N+L
Sbjct: 189 LG--ELKRLEYISEAA--FEGLVNLRYLNLGMCNLKDIPN-LTALVRLEELELSGNRLDL 243
Query: 210 ISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVL 268
I P F GL SL+ L + H + T+E + L +LEEL +SHN+L L D F L L
Sbjct: 244 IRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRL 303
Query: 269 CKADLAHN 276
+ L HN
Sbjct: 304 ERVHLNHN 311
Score = 155 (59.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 66/255 (25%), Positives = 119/255 (46%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 136
N+ N I ++R D F++L +L+ + L N + + + +GL L L L N+LT
Sbjct: 92 NLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 151
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHG 196
L +LR + L N I + N+V + + +L+ E + + A G+
Sbjct: 152 QAFEYLSKLRELWLRNNPIESIPSY--AFNRVPSLRRLDLGELKRLEYIS-EAAFEGLVN 208
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
L L+L L+ I P+ L L+ L++S N L + S L +L +L++ H +
Sbjct: 209 LRYLNLGMCNLKDI-PN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVA 266
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCD-DS 314
++++ F L L + +L+HNN+ ++ L L+ R++L NP C+ D
Sbjct: 267 TIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP-------LHRLERVHLNHNPWHCNCDV 319
Query: 315 MRAVIDAMETINNNT 329
+ ET+ +NT
Sbjct: 320 LWLSWWLKETVPSNT 334
Score = 127 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 46/162 (28%), Positives = 76/162 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL LN L L +NRL ++ Q LSKL+ L + N +E++PS F+++ SL
Sbjct: 132 GLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS--YAFNRVPSLRRLDL 189
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R+ + + GL L+ N+ + + L L+ + L N++ +
Sbjct: 190 GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPG 247
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GLT L L+L H Q+ + LK L ++LS+N +
Sbjct: 248 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 289
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 201 (75.8 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 65/248 (26%), Positives = 122/248 (49%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 90
++ + +L +P+ I + ++ +L N ++ D + L L++ + N + +
Sbjct: 70 VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTD-TFKHLRHLEILQLSKNLVRKIEVG 128
Query: 91 EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
F L +L+++ L +N++T++ + L+KL L+L +N + + LR +D
Sbjct: 129 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 188
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRT 209
L ++ + +E +G+ N+ L L ++++ L + L L+LS N+L
Sbjct: 189 LG--ELKRLEYISEAA--FEGLVNLRYLNLGMCNLKDIPN-LTALVRLEELELSGNRLDL 243
Query: 210 ISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVL 268
I P F GL SL+ L + H + T+E + L +LEEL +SHN+L L D F L L
Sbjct: 244 IRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRL 303
Query: 269 CKADLAHN 276
+ L HN
Sbjct: 304 ERVHLNHN 311
Score = 155 (59.6 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 66/255 (25%), Positives = 119/255 (46%)
Query: 78 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 136
N+ N I ++R D F++L +L+ + L N + + + +GL L L L N+LT
Sbjct: 92 NLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 151
Query: 137 DDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHG 196
L +LR + L N I + N+V + + +L+ E + + A G+
Sbjct: 152 QAFEYLSKLRELWLRNNPIESIPSY--AFNRVPSLRRLDLGELKRLEYIS-EAAFEGLVN 208
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
L L+L L+ I P+ L L+ L++S N L + S L +L +L++ H +
Sbjct: 209 LRYLNLGMCNLKDI-PN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVA 266
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCD-DS 314
++++ F L L + +L+HNN+ ++ L L+ R++L NP C+ D
Sbjct: 267 TIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP-------LHRLERVHLNHNPWHCNCDV 319
Query: 315 MRAVIDAMETINNNT 329
+ ET+ +NT
Sbjct: 320 LWLSWWLKETVPSNT 334
Score = 127 (49.8 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 46/162 (28%), Positives = 76/162 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL LN L L +NRL ++ Q LSKL+ L + N +E++PS F+++ SL
Sbjct: 132 GLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS--YAFNRVPSLRRLDL 189
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R+ + + GL L+ N+ + + L L+ + L N++ +
Sbjct: 190 GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDI--PNLTALVRLEELELSGNRLDLIRPG 247
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GLT L L+L H Q+ + LK L ++LS+N +
Sbjct: 248 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 289
>UNIPROTKB|F1RQ64 [details] [associations]
symbol:LOC100525800 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:TVFVAFC EMBL:CU928352 RefSeq:XP_003135482.1
Ensembl:ENSSSCT00000023710 Ensembl:ENSSSCT00000034435
GeneID:100525800 KEGG:ssc:100525800 Uniprot:F1RQ64
Length = 838
Score = 157 (60.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 44/178 (24%), Positives = 89/178 (50%)
Query: 166 NQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKML 224
N ++ L+L +N+++N++G A +G+ L +L L++N+L+ + D F+G+++L+ L
Sbjct: 77 NTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYL 136
Query: 225 DISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQ 284
+NL+ +E + L L+ L ++ N ++ L + L D+ N I+ +
Sbjct: 137 QADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGNRIQKLPYI 196
Query: 285 LALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQPDSN 342
L+ + + + LE NP C + + +E + N I GE IC+ S+
Sbjct: 197 GVLEH------IGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYI-GEAICETPSD 247
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 41/150 (27%), Positives = 68/150 (45%)
Query: 8 LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL- 64
L +N N +K ++ L LL + NQ+ A+ D+ + L LY N N+I L
Sbjct: 382 LHVNGNSIKDVDISDFAEFEGLDLLHLGSNQIAAIKGDVFHNLTNLRRLYLNGNQIERLY 441
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 124
+ GL LQ +++N I + F ++ NL + L NN + S+ + LA L
Sbjct: 442 PEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAPLARL 501
Query: 125 YLSHNQLTEFLLDDIRG-LKRLRTVDLSYN 153
L +N+ + + L+ L +DL N
Sbjct: 502 NLRNNKFMYLPVSGVLDQLQSLTQIDLEGN 531
Score = 129 (50.5 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 31 LVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVR 88
L + N L L P+ FS SL NN++ +++G GL+ L+ +++ N++ ++R
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 89 RDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
D F + NL+ + N I + + + L KL L L+ N L FL D+I L
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDN-LISFLPDNIFRFASLTH 182
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
+D+ N+I K ++ + + EL+L+ N
Sbjct: 183 LDIRGNRIQKLPYIGV----LEHIGRVVELQLEDN 213
Score = 129 (50.5 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 50/186 (26%), Positives = 83/186 (44%)
Query: 49 SQLG-SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 107
S LG S+ I S+ L+ + +++ N I V +F LD + L +NQ
Sbjct: 353 SDLGLSVNCQEKNIQSMSELIPKPFNAKKLHVNGNSIKDVDISDFAEFEGLDLLHLGSNQ 412
Query: 108 ITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF--GTRNEG 164
I ++ + LT L LYL+ NQ+ + GL L+ + L YN I + GT
Sbjct: 413 IAAIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGT---- 468
Query: 165 KNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKM 223
+ N+ L L +N +++L + L+RL+L +NK + + L SL
Sbjct: 469 ---FDSMPNLQLLYLNNNLLKSLPVYIFSGAPLARLNLRNNKFMYLPVSGVLDQLQSLTQ 525
Query: 224 LDISHN 229
+D+ N
Sbjct: 526 IDLEGN 531
Score = 123 (48.4 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 45/164 (27%), Positives = 80/164 (48%)
Query: 177 LKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I + G + + L RL L+ N++ + P+ F GL +L+ L + +NL+ +
Sbjct: 406 LHLGSNQIAAIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEIL 465
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
+ +P L+ L++++N L L F G P L + +L +N + + L
Sbjct: 466 AGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMYLPVSGVLDQ----- 519
Query: 295 GLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQ 338
L S +I LEGNP C + A+ +E +N+ + E C+
Sbjct: 520 -LQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVK-ELRCE 561
Score = 93 (37.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 34/108 (31%), Positives = 59/108 (54%)
Query: 8 LFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL 64
L L NN+L+++EG LG LS L+ L + N+L+ L +D L L L A+ N I +
Sbjct: 88 LQLGNNKLQNIEGGAFLG-LSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYI 146
Query: 65 D-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 111
+ G L KL+V ++ N I+ + + F+ +L + ++ N+I +
Sbjct: 147 ERGAFNKLHKLKVLILNDNLISFLPDNIFR-FASLTHLDIRGNRIQKL 193
Score = 91 (37.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 59
G+ +L +L + N +K +E G L KL++L++ N + LP +I F+ L L N
Sbjct: 129 GIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGN 188
Query: 60 RITSLD--GLLRGLTKLQVFNMDFN 82
RI L G+L + ++ ++ N
Sbjct: 189 RIQKLPYIGVLEHIGRVVELQLEDN 213
Score = 76 (31.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 24/103 (23%), Positives = 46/103 (44%)
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
Q I+++ + +L ++ N ++ + DF + L +L + N + ++
Sbjct: 362 QEKNIQSMSELIPKPFNAKKLHVNGNSIKDVDISDFAEFEGLDLLHLGSNQIAAIKGDVF 421
Query: 240 TFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAI 281
L L L+++ N + RL + F GL L L +N IK I
Sbjct: 422 HNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEI 464
Score = 67 (28.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYAN 57
GL+ L L LNNN LK L LG + L+ L + N ++ + +L L N
Sbjct: 105 GLSALKQLHLNNNELKILRADTFLG-IENLEYLQADYNLIKYIERGAFNKLHKLKVLILN 163
Query: 58 NNRITSL-DGLLR--GLTKLQV 76
+N I+ L D + R LT L +
Sbjct: 164 DNLISFLPDNIFRFASLTHLDI 185
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 200 (75.5 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 67/250 (26%), Positives = 123/250 (49%)
Query: 29 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 88
+++ + +N L +P I ++L +L+ N +I ++ + L L++ + N I +
Sbjct: 59 KVICVRKN-LREVPDGISTNTRLLNLHENQIQIIKVNSF-KHLRHLEILQLSRNHIRTIE 116
Query: 89 RDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL+++ L +N++T++ N + L+KL L+L +N + + LR
Sbjct: 117 IGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRR 176
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+DL ++ + +EG +G++N+ L L + + L + L LDLS N L
Sbjct: 177 LDLG--ELKRLSYISEGA--FEGLSNLRYLNLAMCNLREIPN-LTPLIKLDELDLSGNHL 231
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLP 266
I P F GL L+ L + + + +E + L +L E+ ++HN+LT L D F L
Sbjct: 232 SAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 291
Query: 267 VLCKADLAHN 276
L + L HN
Sbjct: 292 HLERIHLHHN 301
Score = 127 (49.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL +LN L L +NRL ++ G LSKL+ L + N +E++PS F+++ SL
Sbjct: 122 GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDL 179
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R++ + +G GL+ L+ N+ + + L LD + L N ++++
Sbjct: 180 GELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPG 237
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GL L L++ +Q+ + L+ L ++L++N +
Sbjct: 238 SFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 279
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 200 (75.5 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 67/250 (26%), Positives = 123/250 (49%)
Query: 29 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 88
+++ + +N L +P I ++L +L+ N +I ++ + L L++ + N I +
Sbjct: 59 KVICVRKN-LREVPDGISTNTRLLNLHENQIQIIKVNSF-KHLRHLEILQLSRNHIRTIE 116
Query: 89 RDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL+++ L +N++T++ N + L+KL L+L +N + + LR
Sbjct: 117 IGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRR 176
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+DL ++ + +EG +G++N+ L L + + L + L LDLS N L
Sbjct: 177 LDLG--ELKRLSYISEGA--FEGLSNLRYLNLAMCNLREIPN-LTPLIKLDELDLSGNHL 231
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLP 266
I P F GL L+ L + + + +E + L +L E+ ++HN+LT L D F L
Sbjct: 232 SAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 291
Query: 267 VLCKADLAHN 276
L + L HN
Sbjct: 292 HLERIHLHHN 301
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL +LN L L +NRL ++ G LSKL+ L + N +E++PS F+++ SL
Sbjct: 122 GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDL 179
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R++ + +G GL+ L+ N+ + + L LD + L N ++++
Sbjct: 180 GELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPG 237
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GL L L++ +Q+ + L+ L ++L++N +
Sbjct: 238 SFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 279
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 200 (75.5 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 67/250 (26%), Positives = 123/250 (49%)
Query: 29 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 88
+++ + +N L +P I ++L +L+ N +I ++ + L L++ + N I +
Sbjct: 59 KVICVRKN-LREVPDGISTNTRLLNLHENQIQIIKVNSF-KHLRHLEILQLSRNHIRTIE 116
Query: 89 RDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL+++ L +N++T++ N + L+KL L+L +N + + LR
Sbjct: 117 IGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRR 176
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+DL ++ + +EG +G++N+ L L + + L + L LDLS N L
Sbjct: 177 LDLG--ELKRLSYISEGA--FEGLSNLRYLNLAMCNLREIPN-LTPLVKLDELDLSGNHL 231
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLP 266
I P F GL L+ L + + + +E + L +L E+ ++HN+LT L D F L
Sbjct: 232 SAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 291
Query: 267 VLCKADLAHN 276
L + L HN
Sbjct: 292 HLERIHLHHN 301
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL +LN L L +NRL ++ G LSKL+ L + N +E++PS F+++ SL
Sbjct: 122 GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDL 179
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R++ + +G GL+ L+ N+ + + L LD + L N ++++
Sbjct: 180 GELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLVKLDELDLSGNHLSAIRPG 237
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GL L L++ +Q+ + L+ L ++L++N +
Sbjct: 238 SFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 279
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 200 (75.5 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 67/250 (26%), Positives = 123/250 (49%)
Query: 29 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 88
+++ + +N L +P I ++L +L+ N +I ++ + L L++ + N I +
Sbjct: 59 KVICVRKN-LREVPDGISTNTRLLNLHENQIQIIKVNSF-KHLRHLEILQLSRNHIRTIE 116
Query: 89 RDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL+++ L +N++T++ N + L+KL L+L +N + + LR
Sbjct: 117 IGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRR 176
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+DL ++ + +EG +G++N+ L L + + L + L LDLS N L
Sbjct: 177 LDLG--ELKRLSYISEGA--FEGLSNLRYLNLAMCNLREIPN-LTPLIKLDELDLSGNHL 231
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLP 266
I P F GL L+ L + + + +E + L +L E+ ++HN+LT L D F L
Sbjct: 232 SAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 291
Query: 267 VLCKADLAHN 276
L + L HN
Sbjct: 292 HLERIHLHHN 301
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL +LN L L +NRL ++ G LSKL+ L + N +E++PS F+++ SL
Sbjct: 122 GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDL 179
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R++ + +G GL+ L+ N+ + + L LD + L N ++++
Sbjct: 180 GELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPG 237
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GL L L++ +Q+ + L+ L ++L++N +
Sbjct: 238 SFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 279
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 200 (75.5 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 67/250 (26%), Positives = 123/250 (49%)
Query: 29 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 88
+++ + +N L +P I ++L +L+ N +I ++ + L L++ + N I +
Sbjct: 59 KVICVRKN-LREVPDGISTNTRLLNLHENQIQIIKVNSF-KHLRHLEILQLSRNHIRTIE 116
Query: 89 RDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL+++ L +N++T++ N + L+KL L+L +N + + LR
Sbjct: 117 IGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRR 176
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+DL ++ + +EG +G++N+ L L + + L + L LDLS N L
Sbjct: 177 LDLG--ELKRLSYISEGA--FEGLSNLRYLNLAMCNLREIPN-LTPLIKLDELDLSGNHL 231
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLP 266
I P F GL L+ L + + + +E + L +L E+ ++HN+LT L D F L
Sbjct: 232 SAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 291
Query: 267 VLCKADLAHN 276
L + L HN
Sbjct: 292 HLERIHLHHN 301
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL +LN L L +NRL ++ G LSKL+ L + N +E++PS F+++ SL
Sbjct: 122 GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDL 179
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R++ + +G GL+ L+ N+ + + L LD + L N ++++
Sbjct: 180 GELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPG 237
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GL L L++ +Q+ + L+ L ++L++N +
Sbjct: 238 SFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 279
>ZFIN|ZDB-GENE-041008-23 [details] [associations]
symbol:fmoda "fibromodulin a" species:7955 "Danio
rerio" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450
ZFIN:ZDB-GENE-041008-23 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000234447
HOVERGEN:HBG108061 PANTHER:PTHR24371:SF11 EMBL:BC096939
IPI:IPI00487287 RefSeq:NP_001025243.1 UniGene:Dr.133900
ProteinModelPortal:Q4V9E0 STRING:Q4V9E0 GeneID:791822
KEGG:dre:791822 CTD:791822 InParanoid:Q4V9E0 NextBio:20930800
Uniprot:Q4V9E0
Length = 342
Score = 194 (73.4 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 63/234 (26%), Positives = 115/234 (49%)
Query: 53 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
++Y +N I + + ++++ + NQIT V + F N NL + L N I S+
Sbjct: 57 AMYCDNRNIQKMPYIP---SRMKYVYLQHNQITSVPDNAFGNATNLVWVMLHENHINSVG 113
Query: 113 S-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGV 171
+ + L+ L LYL++N LTE + R L+ LR L++NKI K N +G+
Sbjct: 114 KQAFAKLSNLNRLYLNNNNLTEVPSNLPRSLRDLR---LNHNKIGKLAP-----NAFEGM 165
Query: 172 TNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
N+ L L HN ++++ L G+ L+ LD+S N+L+ + P+ + L L + N +
Sbjct: 166 ENLTILLLHHNSLQDIGVGLKGLKSLTLLDVSRNQLKKV-PESLP--EMLHQLYLDSNSI 222
Query: 232 TTLEETSKTFLPALEELFVSHNSLTR--LDKDFHGLPVLCKADLAHNNIKAINI 283
+ L+ + +HN LT + ++ L + DL+ N +++I +
Sbjct: 223 GAVPANFLNQFSNLQYVRFAHNELTNKGIPQNTFNNSGLVELDLSFNKLESIPV 276
Score = 140 (54.3 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 49/164 (29%), Positives = 80/164 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 60
G+ +L L L++N L+ + L L L LL + +NQL+ +P + L LY ++N
Sbjct: 164 GMENLTILLLHHNSLQDIGVGLKGLKSLTLLDVSRNQLKKVPESLP--EMLHQLYLDSNS 221
Query: 61 ITSLDG-LLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
I ++ L + LQ N++T + ++ F N L + L N++ S+ +S
Sbjct: 222 IGAVPANFLNQFSNLQYVRFAHNELTNKGIPQNTFNN-SGLVELDLSFNKLESI-PVVS- 278
Query: 118 LTKLAYLYLSHNQLTEFLLD------DIRGLKRLRTVDLSYNKI 155
T L +LYL NQ+ EF L D+ RLR + L N+I
Sbjct: 279 -TSLQHLYLQANQIKEFTLGSFCSVVDVMNFSRLRVLRLEGNEI 321
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/187 (24%), Positives = 82/187 (43%)
Query: 3 TDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
T+L W+ L+ N + S+ Q LS L L + N L +PS++ L L N+N+I
Sbjct: 97 TNLVWVMLHENHINSVGKQAFAKLSNLNRLYLNNNNLTEVPSNLP--RSLRDLRLNHNKI 154
Query: 62 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 120
L G+ L + + N + + + L +L + + NQ+ + SL +
Sbjct: 155 GKLAPNAFEGMENLTILLLHHNSLQDIGVG-LKGLKSLTLLDVSRNQLKKVPESLPEM-- 211
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L LYL N + + + L+ V ++N++ G N + + EL L
Sbjct: 212 LHQLYLDSNSIGAVPANFLNQFSNLQYVRFAHNELTNKGIPQNTFNN----SGLVELDLS 267
Query: 181 HNEIENL 187
N++E++
Sbjct: 268 FNKLESI 274
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 44/157 (28%), Positives = 80/157 (50%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNR 60
L++LN L+LNNN L + L L+ L + N++ L P+ + L L ++N
Sbjct: 120 LSNLNRLYLNNNNLTEVPSNLPR--SLRDLRLNHNKIGKLAPNAFEGMENLTILLLHHNS 177
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLT 119
+ + L+GL L + ++ NQ+ V + LH L L +N I ++ ++ L+ +
Sbjct: 178 LQDIGVGLKGLKSLTLLDVSRNQLKKVPESLPEMLHQL---YLDSNSIGAVPANFLNQFS 234
Query: 120 KLAYLYLSHNQLT-EFLLDDIRGLKRLRTVDLSYNKI 155
L Y+ +HN+LT + + + L +DLS+NK+
Sbjct: 235 NLQYVRFAHNELTNKGIPQNTFNNSGLVELDLSFNKL 271
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 53/235 (22%), Positives = 107/235 (45%)
Query: 26 SKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQ 83
S+++ + ++ NQ+ ++P + + L + + N I S+ L+ L ++ N
Sbjct: 73 SRMKYVYLQHNQITSVPDNAFGNATNLVWVMLHENHINSVGKQAFAKLSNLNRLYLNNNN 132
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 142
+T V + ++L +L L +N+I + ++ G+ L L L HN L + + ++GL
Sbjct: 133 LTEVPSNLPRSLRDL---RLNHNKIGKLAPNAFEGMENLTILLLHHNSLQDIGVG-LKGL 188
Query: 143 KRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLD 201
K L +D+S N++ K E ++ + +L L N I + + L +
Sbjct: 189 KSLTLLDVSRNQLKKVP---ESLPEM-----LHQLYLDSNSIGAVPANFLNQFSNLQYVR 240
Query: 202 LSHNKLRTIS-PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
+HN+L P + L LD+S N L ++ S + L+ L++ N +
Sbjct: 241 FAHNELTNKGIPQNTFNNSGLVELDLSFNKLESIPVVSTS----LQHLYLQANQI 291
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 200 (75.5 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 66/248 (26%), Positives = 122/248 (49%)
Query: 31 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 90
++ + L +P I ++ +L N ++ +D + L L++ + N I +
Sbjct: 61 VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSF-KHLRHLEILQLSKNHIRNIEIG 119
Query: 91 EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 149
F L NL+++ L +N++T++ N + L+KL L+L +N + + LR +D
Sbjct: 120 AFNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLD 179
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRT 209
L ++ + +EG +G++N+ L L ++ + L+ + L L++S N+L
Sbjct: 180 LG--ELKRLSYISEGA--FEGLSNLRYLNLGMCNLKEIPN-LIPLVRLDELEMSGNQLSI 234
Query: 210 ISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVL 268
I P F GL L+ L + H + T+E + L +L EL ++HN+LT L D F L L
Sbjct: 235 IRPGSFKGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHL 294
Query: 269 CKADLAHN 276
+ L HN
Sbjct: 295 ERVHLHHN 302
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 44/162 (27%), Positives = 80/162 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL +LN L L +NRL ++ G LSKL+ L + N +E++PS F+++ SL
Sbjct: 123 GLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPS--YAFNRVPSLRRLDL 180
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R++ + +G GL+ L+ N+ + + L LD + + NQ++ +
Sbjct: 181 GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEI--PNLIPLVRLDELEMSGNQLSIIRPG 238
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GL L L++ H Q+ + L+ L ++L++N +
Sbjct: 239 SFKGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNL 280
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 202 (76.2 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 83/285 (29%), Positives = 134/285 (47%)
Query: 3 TDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNR 60
T++ L L +N+L+ L S+L L N + L ++ Q L L +N
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 61 ITSLDG----LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS--MNSS 114
I+ L LT+L + + N I ++ D F+NL NL + L +N ++S + +
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMS---NSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQ 168
Query: 115 LSGLTKLAYLYLSHNQLTEFLLD--DIRGLKRLRTVDLSYNKINKFGTRN-EGKNQVQGV 171
L L L L LS+N+++ D G L+ ++LS N+I +F ++ G+
Sbjct: 169 LQ-LENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGL 227
Query: 172 TNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLD--SLKMLDISHN 229
+ + KL + E L L + L LS N+L TIS F GL +L LD+S N
Sbjct: 228 S-LNNAKLSPSLTEKLCLELSNT-SIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRN 285
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKADL 273
L + S +LP LE L + +N++ L + F+GL L + DL
Sbjct: 286 SLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDL 330
Score = 193 (73.0 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 84/298 (28%), Positives = 137/298 (45%)
Query: 3 TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPS-------DIQLFSQLGSL 54
T+L L L+ N L+ + L L+ L +E N +E L S +++ S
Sbjct: 275 TNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSF 334
Query: 55 YANNNRITSL----DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN--QI 108
+ +TSL D + L L+ NMD N ++R+ F L L +SL N+ +
Sbjct: 335 TRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSL 394
Query: 109 TSMNS----SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 164
++ + SL+G L L L+ N++++ L L +DL N+I + T E
Sbjct: 395 RTLTNETFLSLAGCP-LLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEW 453
Query: 165 KNQVQGVTNIFELKLQHNE-IENLDGALMGIHGLSRLDLSHNKLRTI--SPDDFIGLDSL 221
+ G+ NI E+ L +N+ +E + + L RL L L+ + SP F L +L
Sbjct: 454 R----GLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNL 509
Query: 222 KMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFH-GLPVLCKADLAHNNI 278
+LD+S+N + + + L LE L + HN+L RL K + G PV L H +I
Sbjct: 510 VILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHI 567
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 55/165 (33%), Positives = 82/165 (49%)
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T + L L+HNQL + +L T+D +N I+K Q + + L
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSISKLEPE-----LCQSLPWLEILN 106
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
LQHNEI L D + L+ L L N ++ I D F L +L LD+SHN L++ +
Sbjct: 107 LQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLG 166
Query: 238 SKTFLPALEELFVSHN---SLTRLDKDFHGLPVLCKADLAHNNIK 279
++ L L+EL +S+N SLT + DF G L + +L+ N IK
Sbjct: 167 TQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIK 211
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 84/346 (24%), Positives = 148/346 (42%)
Query: 1 GLTDLNWLFLNNN--RLKSLEGQLG-TLSKLQLLVIE--QNQLEALPSDIQLFSQLGSLY 55
GL L +L L+N+ L++L + +L+ LL+++ +N++ + S FS LG L
Sbjct: 378 GLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGA--FSWLGHLE 435
Query: 56 ANN---NRI-TSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 110
+ N I L G RGL + + +N+ + + F ++ +L + L+ + +
Sbjct: 436 VLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKN 495
Query: 111 MNSSLSG---LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQ 167
++ S S L L L LS+N + + ++GL++L +DL +N + +
Sbjct: 496 VDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGP 555
Query: 168 VQGVTNIFEL---KLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKM 223
VQ + +F L L N + + A + L +DL N L + F SLK
Sbjct: 556 VQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKS 615
Query: 224 LDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCK-ADLAHNNIKAIN 282
L + NL+T++++T F PA L D + ++ H NI ++
Sbjct: 616 LSLQKNLITSVQKT--VFGPAFRNLSYLDMRFNPFDCTCESIAWFVNWINITHTNISELS 673
Query: 283 IQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNN 328
T Q G L + +P C DS A + + IN N
Sbjct: 674 NHYLCNTPPQYHGYPVML---FDVSP--CKDS--APFELLFMININ 712
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 89/325 (27%), Positives = 141/325 (43%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTL--SKLQLLVIEQNQL-EALPSDIQLFSQLGSLYAN 57
L +L L L+NN++ SL G+ L S L+ L + NQ+ E P +L L N
Sbjct: 171 LENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGLSLN 230
Query: 58 NNRIT-SL-DGLLRGLTKLQVFNMDF--NQITMVRRDEFQNLH--NLDSISLQNNQITSM 111
N +++ SL + L L+ + N+ NQ+ + F L NL ++ L N + M
Sbjct: 231 NAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVM 290
Query: 112 -NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG 170
N S + L L YL L +N + GL LR +DL F TR Q
Sbjct: 291 GNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLR----RSF-TR-----QSIS 340
Query: 171 VTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
+T++ ++ D + + L L++ N I + F GL LK L +S++
Sbjct: 341 LTSLPKID---------DFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSF 391
Query: 231 LTTLEETSKTFLPA----LEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQL 285
+ T++TFL L L ++ N ++++ F L L DL N I +L
Sbjct: 392 SSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQ---EL 448
Query: 286 ALKTQCQIFGLNSTLRIYLEGNPVL 310
T + GL++ + IYL N L
Sbjct: 449 ---TGQEWRGLDNIVEIYLSYNKYL 470
Score = 139 (54.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 41/131 (31%), Positives = 64/131 (48%)
Query: 172 TNIFELKLQHNEIENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
TNI L L HN++ L A + L+ LD N + + P+ L L++L++ HN
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 231 LTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKT 289
++ L + + F L EL + NS+ ++ D F L L K DL+HN + + L T
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTK----LGT 167
Query: 290 QCQIFGLNSTL 300
Q Q+ L L
Sbjct: 168 QLQLENLQELL 178
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 202 (76.2 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 85/290 (29%), Positives = 131/290 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YA 56
GL L L L NN+L+ + + L L LQ L ++ N + +P FS L SL +
Sbjct: 112 GLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSC--FSGLHSLRHLWL 169
Query: 57 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS- 114
++N +T + R L+ LQ + N+I + F NL +L + L NN+I S+
Sbjct: 170 DDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKC 229
Query: 115 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNI 174
GL L L L++N L EF IR L L+ + N I R+ + G ++
Sbjct: 230 FDGLHSLETLDLNYNNLDEFPTA-IRTLSNLKELGFHSNNI-----RSIPEKAFVGNPSL 283
Query: 175 FELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTT 233
+ N I+ + A + L L L+ T PD G +L+ L ++ +++
Sbjct: 284 ITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPD-LTGTANLESLTLTGAQISS 342
Query: 234 LEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINI 283
L +T LP L+ L +S+N L L F L K DL HN I I +
Sbjct: 343 LPQTVCNQLPNLQVLDLSYNLLEDLPS-FSVCQKLQKIDLRHNEIYEIKV 391
Score = 201 (75.8 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 76/259 (29%), Positives = 116/259 (44%)
Query: 15 LKSLEGQLGTL-SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLT 72
L L L S L L + +QL LP+ + L L N +T + G GL
Sbjct: 57 LSELPSNLSVFTSYLDLSMNNISQL--LPNPLPSLRFLEELRLAGNALTYIPKGAFTGLY 114
Query: 73 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQL 131
L+V + NQ+ V + QNL +L S+ L N I+ + S SGL L +L+L N L
Sbjct: 115 SLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 132 TEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGAL 191
TE + R L L+ + L+ NKI+ G ++++ L L +N I +L
Sbjct: 175 TEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGN-----LSSLVVLHLHNNRIHSLGKKC 229
Query: 192 M-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFV 250
G+H L LDL++N L P L +LK L N + ++ E + P+L +
Sbjct: 230 FDGLHSLETLDLNYNNLDEF-PTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHF 288
Query: 251 SHNSLTRLDKD-FHGLPVL 268
N + + + F LP L
Sbjct: 289 YDNPIQFVGRSAFQHLPEL 307
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 77/308 (25%), Positives = 139/308 (45%)
Query: 2 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 59
L+ L + L N++ + + G LS L +L + N++ +L L +L N N
Sbjct: 185 LSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 244
Query: 60 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGL 118
+ +R L+ L+ N I + F +L +I +N I + S+ L
Sbjct: 245 NLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHL 304
Query: 119 TKLAYLYLSH-NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFEL 177
+L L L+ +Q+TEF D+ G L ++ L+ +I+ NQ+ N+ L
Sbjct: 305 PELRTLTLNGASQITEF--PDLTGTANLESLTLTGAQISSLP--QTVCNQLP---NLQVL 357
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N +E+L + L ++DL HN++ I D F L SL+ L+++ N + +
Sbjct: 358 DLSYNLLEDLPSFSV-CQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPN 416
Query: 238 SKTFLPALEELFVSHNSLTRLD-KDFHGLPVL-------CKADLAHNNIKAIN-IQLALK 288
+ + LP+L +L +S N L+ HGL L ++ ++ N + I++
Sbjct: 417 AFSTLPSLIKLDLSSNLLSSFPITGLHGLTHLKLTGNHALQSLISSENFPELKVIEMPYA 476
Query: 289 TQCQIFGL 296
QC FG+
Sbjct: 477 YQCCAFGV 484
Score = 137 (53.3 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 66/251 (26%), Positives = 117/251 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS-QLGSLYANNN 59
GL L L LN N L + TLS L+ L N + ++P + + L +++ +N
Sbjct: 232 GLHSLETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDN 291
Query: 60 RITSLD-GLLRGLTKLQVFNMD-FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
I + + L +L+ ++ +QIT + NL+S++L QI+S+ ++
Sbjct: 292 PIQFVGRSAFQHLPELRTLTLNGASQITEF--PDLTGTANLESLTLTGAQISSLPQTVCN 349
Query: 118 -LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L LS+N L + L ++L+ +DL +N+I + + Q + ++
Sbjct: 350 QLPNLQVLDLSYNLLED--LPSFSVCQKLQKIDLRHNEIYEIKV-----DTFQQLLSLRS 402
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I + A + L +LDLS N L + GL LK+ +H L + +
Sbjct: 403 LNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITGLHGLTHLKLTG-NHALQSLI- 460
Query: 236 ETSKTFLPALE 246
+S+ F P L+
Sbjct: 461 -SSENF-PELK 469
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 58/230 (25%), Positives = 105/230 (45%)
Query: 60 RITSLD-GLLRGLTKLQVF----NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NS 113
R+ D GL + L VF ++ N I+ + + +L L+ + L N +T +
Sbjct: 49 RVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKG 108
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTN 173
+ +GL L L L +NQL + ++ L+ L+++ L N I+ + G+ +
Sbjct: 109 AFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPP-----SCFSGLHS 163
Query: 174 IFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLL 231
+ L L N + + A + L + L+ NK+ I PD G L SL +L + +N +
Sbjct: 164 LRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHI-PDYAFGNLSSLVVLHLHNNRI 222
Query: 232 TTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
+L + L +LE L +++N+L L L + NNI++I
Sbjct: 223 HSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIRSI 272
Score = 119 (46.9 bits), Expect = 0.00084, P = 0.00084
Identities = 56/218 (25%), Positives = 92/218 (42%)
Query: 101 ISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ L N I+ + + L L L L L+ N LT GL L+ + L N++
Sbjct: 71 LDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVP 130
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
T +Q + ++ L+L N I + G+H L L L N L I F L
Sbjct: 131 TE-----ALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSL 185
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
+L+ + ++ N + + + + L +L L + +N + L K F GL L DL +NN
Sbjct: 186 SALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNN 245
Query: 278 IKAINIQLALKTQCQIFGLNST-LRIYLE----GNPVL 310
+ + + + G +S +R E GNP L
Sbjct: 246 LDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSL 283
>MGI|MGI:1922228 [details] [associations]
symbol:Lrriq1 "leucine-rich repeats and IQ motif containing
1" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001611
InterPro:IPR000048 Pfam:PF00612 PROSITE:PS50096 PROSITE:PS51450
SMART:SM00015 MGI:MGI:1922228 EMBL:AC122850 EMBL:AC162918
EMBL:BC051400 EMBL:AK015687 EMBL:AK158531 IPI:IPI00944096
IPI:IPI00944193 RefSeq:NP_001157031.1 RefSeq:NP_083410.1
UniGene:Mm.483817 PhosphoSite:Q0P5X1 PRIDE:Q0P5X1
Ensembl:ENSMUST00000020043 Ensembl:ENSMUST00000166240 GeneID:74978
KEGG:mmu:74978 UCSC:uc007gyi.1 CTD:84125 eggNOG:NOG119359
GeneTree:ENSGT00510000049718 HOGENOM:HOG000113382
HOVERGEN:HBG095533 InParanoid:Q0P5X1 OMA:VKIQAKY OrthoDB:EOG4QJRMB
NextBio:341934 Bgee:Q0P5X1 CleanEx:MM_LRRIQ1 Genevestigator:Q0P5X1
Uniprot:Q0P5X1
Length = 1673
Score = 205 (77.2 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 83/284 (29%), Positives = 135/284 (47%)
Query: 57 NNNRITSLD--GL--LRGL---TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 109
+N +I SL GL L+GL T+L+ + N I + +NL NL + L NN +T
Sbjct: 831 SNLQILSLRRCGLTSLQGLSHCTRLKYIDAQENHIEAI---SCENLENLSVVLLNNNLLT 887
Query: 110 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQ 169
S++ G T L L LSHN++T + + LK L+ + + +N++ T K +
Sbjct: 888 SIHG-FDGCTNLQSLELSHNKITR--ISGLESLKYLQELTVDHNQL--IST----KGLCE 938
Query: 170 GVTNIFELKLQHNEIENLDGALMGIHGLSRL-DLSHNKLRTISPDDFIGLDSLKMLDISH 228
T ++ L HN + +DG +G GL ++ L N LR P L+ L +
Sbjct: 939 APTIVY-LDCSHNHLTGIDG--IGNCGLLQIIKLQGNYLR--EPPSLRNHVLLRELHLDD 993
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALK 288
N ++++E S +LP L+ L +S NSL + FH L L K D+++N + +
Sbjct: 994 NSISSVEGLSSCWLPLLQYLSISQNSLATIVPLFH-LVSLEKLDVSNNCLSDLT-----N 1047
Query: 289 TQCQIFGLNSTLRIYLEGNPVLCD----DSMRAVIDAMETINNN 328
C S + L GNPVL + DS+ + A+ +N +
Sbjct: 1048 VMCWFNACYSLRELCLTGNPVLQEINWRDSILKTLPALRVLNGD 1091
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 154 (59.3 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 47/166 (28%), Positives = 84/166 (50%)
Query: 176 ELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
E++L+ N+I ++ + + L+RLDLS N + I P F+GL +L L + N +T L
Sbjct: 291 EIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDL 350
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
+ + L +L+ L ++ N LT + + F +P L L N+IK+I+ +
Sbjct: 351 KSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSIS-------EVTF 403
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTKIHGETICQP 339
L S ++L NP++CD +++ + A + N + G QP
Sbjct: 404 QNLTSLSTLHLAKNPLICDCNLQWL--AQINLQKNIETSGARCEQP 447
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 82/322 (25%), Positives = 140/322 (43%)
Query: 10 LNNNRLKSLEGQ-LGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLDG- 66
L N++ S+ L L L + +N + E P L +L N IT L
Sbjct: 294 LEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSD 353
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLY 125
GL LQ+ ++ NQ+T +RR F ++ L +SL +N I S++ + LT L+ L+
Sbjct: 354 TFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLH 413
Query: 126 LSHNQLT-EFLLDDIRGLKRLRTVDLSYNKIN--------KFGTRNEGKNQVQGVTNIFE 176
L+ N L + L + + + ++ S + KF T K + +G +
Sbjct: 414 LAKNPLICDCNLQWLAQINLQKNIETSGARCEQPKRLRKKKFATLPPNKFKCKGSESFVS 473
Query: 177 LKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEE 236
+ I+++ +G + +D + L TI P I + ++L +S N ++T++
Sbjct: 474 MYADSCFIDSICPTQCDCYGTT-VDCNKRGLNTI-PTS-IPRFATQLL-LSGNNISTVDL 529
Query: 237 TSKTF-LPALEELFVSHNSLTRL-DKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIF 294
S L LE L +S+N +T + DK F L L + L N + + + L Q
Sbjct: 530 NSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFS-SMVLDEQ---- 584
Query: 295 GLNSTLRIY-LEGNPVLCDDSM 315
S L I L GN + C S+
Sbjct: 585 ---SNLEILDLSGNNIQCFSSI 603
Score = 113 (44.8 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 42/131 (32%), Positives = 66/131 (50%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDI- 139
N+IT + ++F +L NL ++ L +NQI ++ N S S L L L LS N++ L D++
Sbjct: 54 NEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRH-LPDNVF 112
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIH-GLS 198
+ +L +DLS N I Q+QG + L L N I L+ ++ L
Sbjct: 113 QNNLKLTHLDLSENDITVVSDA-----QLQGPEFLEVLNLDKNHIFCLENNVISSWVSLE 167
Query: 199 RLDLSHNKLRT 209
L L+ N+L T
Sbjct: 168 VLTLNGNRLTT 178
Score = 109 (43.4 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 32/107 (29%), Positives = 59/107 (55%)
Query: 150 LSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLR 208
L N IN+ + N++ +T +L L HN + +L+ + LS L +S+NKLR
Sbjct: 711 LDANYINEIPAHD--LNRLYSLT---KLDLSHNRLISLENNTFSNLTRLSTLIISYNKLR 765
Query: 209 TISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
+ P F GL++L++L + N ++ L +++ + L ++ + V NSL
Sbjct: 766 CLQPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSNSL 812
Score = 104 (41.7 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 38/119 (31%), Positives = 52/119 (43%)
Query: 198 SRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTR 257
+ L L N + I D L SL LD+SHN L +LE + + L L L +S+N L
Sbjct: 707 TELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRC 766
Query: 258 LDK-DFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
L F+GL L L H N ++ Q L S I + N + CD +M
Sbjct: 767 LQPLAFNGLNALRILSL-HGN------DISFLPQSAFSNLTSITHIAVGSNSLYCDCNM 818
Score = 101 (40.6 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 32/112 (28%), Positives = 61/112 (54%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
L +L L L +N++ ++ Q +L LQ L + +N++ LP ++ Q +L L + N
Sbjct: 67 LMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSEN 126
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 110
IT + D L+G L+V N+D N I + + + +L+ ++L N++T+
Sbjct: 127 DITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGNRLTT 178
Score = 99 (39.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 32/105 (30%), Positives = 52/105 (49%)
Query: 176 ELKLQHNEIENLDGA-LMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
EL L N I + L ++ L++LDLSHN+L ++ + F L L L IS+N L L
Sbjct: 708 ELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCL 767
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNI 278
+ + L AL L + N ++ L + F L + + N++
Sbjct: 768 QPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSNSL 812
Score = 93 (37.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 34/132 (25%), Positives = 56/132 (42%)
Query: 101 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 160
+ N +TS S + T LYL N + E D+ L L +DLS+N++
Sbjct: 688 VRCSNKNLTSFPSRIPFDT--TELYLDANYINEIPAHDLNRLYSLTKLDLSHNRL--ISL 743
Query: 161 RNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLSRLDLSHNKLRTISPDDFIGLD 219
N N +T + L + +N++ L A G++ L L L N + + F L
Sbjct: 744 EN---NTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSNLT 800
Query: 220 SLKMLDISHNLL 231
S+ + + N L
Sbjct: 801 SITHIAVGSNSL 812
Score = 92 (37.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 38 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 97
L +P+ I F+ L NN L+ + L L+V ++ N IT + F+ L
Sbjct: 503 LNTIPTSIPRFATQLLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSK 562
Query: 98 LDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
L + L +N++ +S L + L L LS N + F R+R + + N +
Sbjct: 563 LRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKVIGNDL 621
Score = 86 (35.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/133 (25%), Positives = 60/133 (45%)
Query: 31 LVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVR 88
L ++ N++ + P+D L +L +N+I ++ L LQ + N+I +
Sbjct: 49 LDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLP 108
Query: 89 RDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDD--IRGLKRL 145
+ FQN L + L N IT ++ + L G L L L N + F L++ I L
Sbjct: 109 DNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHI--FCLENNVISSWVSL 166
Query: 146 RTVDLSYNKINKF 158
+ L+ N++ F
Sbjct: 167 EVLTLNGNRLTTF 179
Score = 81 (33.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 198 SRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTR 257
+ + L N++ +I F L +L LD+S N++T ++ + L L L + N++T
Sbjct: 290 TEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITD 349
Query: 258 LDKD-FHGLPVLCKADLAHNNIKAI 281
L D F GL L L N + I
Sbjct: 350 LKSDTFEGLGSLQLLLLNANQLTCI 374
>UNIPROTKB|F1S7K2 [details] [associations]
symbol:LRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615 OMA:RCAGPEA
GO:GO:0050873 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00690000102197 EMBL:CU972396
ProteinModelPortal:F1S7K2 Ensembl:ENSSSCT00000014761 Uniprot:F1S7K2
Length = 347
Score = 194 (73.4 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 67/239 (28%), Positives = 112/239 (46%)
Query: 80 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDD 138
+F +T + D Q + NL + L NNQ+ +++ L + +L L L+ N L
Sbjct: 76 EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 135
Query: 139 IRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGL 197
+ L T+ L N+++ + ++G+ + L L N++ L L+ L
Sbjct: 136 FKVSAALHTLVLKENRLDILDA-----SWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 190
Query: 198 SRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTR 257
LDL +N+L+T+ PD G L+ L + N L LEE P L LF+++N LT
Sbjct: 191 HILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT 250
Query: 258 LDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
L F GL VL DL++N++ ++ L + G N + + GNP +CD +
Sbjct: 251 LAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG-KAAG-NMKVGFDISGNPWICDQKL 307
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 48/159 (30%), Positives = 85/159 (53%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
G+ +L L L+NN+L+ L + L + +L++L + +N L+ LP + ++ + L +L
Sbjct: 90 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 149
Query: 59 NRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
NR+ LD LRGL L+ ++ NQ+ + R N +L + L NNQ+ ++ L
Sbjct: 150 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 209
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
G KL +L+L N+L + +LR + L+ NK+
Sbjct: 210 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKL 248
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/192 (27%), Positives = 91/192 (47%)
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY-LY 125
+L+G+ LQ ++ NQ+ + + L + L N + + L ++ + L
Sbjct: 87 ILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLV 146
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIE 185
L N+L +RGLK LR +DLS N++ R + + T++ L L +N+++
Sbjct: 147 LKENRLDILDASWLRGLKALRHLDLSGNQL-----RTLPRKLLANFTDLHILDLGNNQLQ 201
Query: 186 NLDGALM-GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPA 244
L L+ G L L L N+L+ + L+ L +++N LTTL + L
Sbjct: 202 TLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQV 261
Query: 245 LEELFVSHNSLT 256
L+ L +S+NSLT
Sbjct: 262 LDMLDLSNNSLT 273
Score = 134 (52.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 41/126 (32%), Positives = 66/126 (52%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFS-QLGSLYANN 58
GL L L L+ N+L++L +L + L +L + NQL+ LP D+ +L L+
Sbjct: 162 GLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEG 221
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-S 116
NR+ L+ G L KL+ ++ N++T + F+ L LD + L NN +TS+ L +
Sbjct: 222 NRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWA 281
Query: 117 GLTKLA 122
L K A
Sbjct: 282 SLGKAA 287
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 201 (75.8 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 83/286 (29%), Positives = 125/286 (43%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANN 58
GL L L L NN+L+ + + L L LQ L ++ N + +P + L L+ ++
Sbjct: 38 GLFSLKVLMLQNNQLRQVPTEALQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDD 97
Query: 59 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LS 116
N +T + R L LQ + N+I + F NL +L + L NN+I S+
Sbjct: 98 NSLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFD 157
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
GL L L L++N L EF IR L L+ + N I R G ++
Sbjct: 158 GLHSLETLDLNYNSLDEFPTA-IRTLTNLKELGFHSNNIKSIPER-----AFVGNPSLIT 211
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
+ N I+ + A + L L L+ T PD G SL+ L ++ +T+L
Sbjct: 212 IHFYDNPIQLVGKSAFQNLPELRTLTLNGASQITEFPD-LTGTTSLESLTLTGAQITSLP 270
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
++ LP L+ L +S+N L L F L K DL HN I I
Sbjct: 271 RSACDQLPNLQVLDLSYNLLEDLPC-FTACKKLQKIDLHHNEIDEI 315
Score = 201 (75.8 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 76/290 (26%), Positives = 138/290 (47%)
Query: 5 LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 62
L L L N L + +G L L++L+++ NQL +P++ +Q L SL + N I
Sbjct: 18 LEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQNLRSLQSLRLDANHIN 77
Query: 63 SLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 120
+ GL L+ +D N +T + F++L L +++L N+I + + + L+
Sbjct: 78 YVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSS 137
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQ 180
L L+L +N++ GL L T+DL+YN +++F T ++ +TN+ EL
Sbjct: 138 LVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPTA------IRTLTNLKELGFH 191
Query: 181 HNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
N I+++ + A +G L + N ++ + F L L+ L ++ T E
Sbjct: 192 SNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTLNGASQIT-EFPDL 250
Query: 240 TFLPALEELFVSHNSLTRLDKDF-HGLPVLCKADLAHNNIKAINIQLALK 288
T +LE L ++ +T L + LP L DL++N ++ + A K
Sbjct: 251 TGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDLPCFTACK 300
Score = 199 (75.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 69/238 (28%), Positives = 108/238 (45%)
Query: 36 NQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQ 93
N + LPS+ + L L N +T + G GL L+V + NQ+ V + Q
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQ 61
Query: 94 NLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 152
NL +L S+ L N I + + +GL L +L+L N LTE + R L L+ + L+
Sbjct: 62 NLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLAL 121
Query: 153 NKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDLSHNKLRTIS 211
NKI+ G ++++ L L +N I +L G+H L LDL++N L
Sbjct: 122 NKIHYIPDYAFGN-----LSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEF- 175
Query: 212 PDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVL 268
P L +LK L N + ++ E + P+L + N + + K F LP L
Sbjct: 176 PTAIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPEL 233
Score = 177 (67.4 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 67/247 (27%), Positives = 112/247 (45%)
Query: 23 GTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 81
G LS L +L + N++ +L L +L N N + +R LT L+
Sbjct: 133 GNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPTAIRTLTNLKELGFHS 192
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSH-NQLTEFLLDDI 139
N I + F +L +I +N I + S+ L +L L L+ +Q+TEF D+
Sbjct: 193 NNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTLNGASQITEF--PDL 250
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSR 199
G L ++ L+ +I ++ + N+ L L +N +E+L L +
Sbjct: 251 TGTTSLESLTLTGAQITSLP-----RSACDQLPNLQVLDLSYNLLEDLP-CFTACKKLQK 304
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD 259
+DL HN++ I D F L SL+ LD++ N + + + + LP+L +L VS N L+
Sbjct: 305 IDLHHNEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLSSFP 364
Query: 260 -KDFHGL 265
HGL
Sbjct: 365 VTGLHGL 371
Score = 177 (67.4 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 77/296 (26%), Positives = 135/296 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YA 56
GL L L+L++N L + Q +L LQ + + N++ +P F L SL +
Sbjct: 86 GLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPD--YAFGNLSSLVVLHL 143
Query: 57 NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEF----QNLHNLDSISLQNNQITSM 111
+NNRI SL GL L+ ++++N + DEF + L NL + +N I S+
Sbjct: 144 HNNRIYSLGKKCFDGLHSLETLDLNYNSL-----DEFPTAIRTLTNLKELGFHSNNIKSI 198
Query: 112 -NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS-YNKINKFGTRNEGKNQVQ 169
+ G L ++ N + + L LRT+ L+ ++I +F +
Sbjct: 199 PERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTLNGASQITEFP-------DLT 251
Query: 170 GVTNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISH 228
G T++ L L +I +L A + L LDLS+N L + P F L+ +D+ H
Sbjct: 252 GTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDL-PC-FTACKKLQKIDLHH 309
Query: 229 NLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINI 283
N + ++ + L +L L ++ N + + + F LP L K D++ N + + +
Sbjct: 310 NEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLSSFPV 365
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 76/288 (26%), Positives = 124/288 (43%)
Query: 2 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN-- 58
L L L L+ N + + L L+ L ++ N L +P IQ F L +L A
Sbjct: 63 LRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIP--IQAFRSLPALQAMTLA 120
Query: 59 -NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 116
N+I + D L+ L V ++ N+I + + F LH+L+++ L N + +++
Sbjct: 121 LNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPTAIR 180
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
LT L L N + G L T+ N I G K+ Q + +
Sbjct: 181 TLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVG-----KSAFQNLPELRT 235
Query: 177 LKLQH-NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L ++I L G L L L+ ++ ++ L +L++LD+S+NLL L
Sbjct: 236 LTLNGASQITEFPD-LTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDLP 294
Query: 236 ETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAIN 282
T L+++ + HN + + D F L L DLA N IK I+
Sbjct: 295 --CFTACKKLQKIDLHHNEIDEIKADTFRQLASLRSLDLAWNKIKIIH 340
Score = 158 (60.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 57/203 (28%), Positives = 95/203 (46%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIR 140
N IT + + NL L+ + L N +T + + +GL L L L +NQL + + ++
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQ 61
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLD-GALMGIHGLSR 199
L+ L+++ L N IN N G+ ++ L L N + + A + L
Sbjct: 62 NLRSLQSLRLDANHINYVPP-----NCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQA 116
Query: 200 LDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRL 258
+ L+ NK+ I PD G L SL +L + +N + +L + L +LE L +++NSL
Sbjct: 117 MTLALNKIHYI-PDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEF 175
Query: 259 DKDFHGLPVLCKADLAHNNIKAI 281
L L + NNIK+I
Sbjct: 176 PTAIRTLTNLKELGFHSNNIKSI 198
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 63/251 (25%), Positives = 117/251 (46%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS-QLGSLYANNN 59
GL L L LN N L + TL+ L+ L N ++++P + + L +++ +N
Sbjct: 158 GLHSLETLDLNYNSLDEFPTAIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDN 217
Query: 60 RITSLD-GLLRGLTKLQVFNMD-FNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 116
I + + L +L+ ++ +QIT + +L+S++L QITS+ S+
Sbjct: 218 PIQLVGKSAFQNLPELRTLTLNGASQITEF--PDLTGTTSLESLTLTGAQITSLPRSACD 275
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L LS+N L + L K+L+ +DL +N+I++ + + + ++
Sbjct: 276 QLPNLQVLDLSYNLLED--LPCFTACKKLQKIDLHHNEIDEIKA-----DTFRQLASLRS 328
Query: 177 LKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N+I+ + A + L +LD+S N L + GL LK+ +H L + +
Sbjct: 329 LDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLSSFPVTGLHGLTHLKLTG-NHALQSLIS 387
Query: 236 ETSKTFLPALE 246
+ L +E
Sbjct: 388 SDNFPELKVME 398
>TAIR|locus:2161825 [details] [associations]
symbol:AT5G56040 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0006084 "acetyl-CoA metabolic process"
evidence=RCA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0016132
"brassinosteroid biosynthetic process" evidence=RCA] [GO:0048443
"stamen development" evidence=RCA] [GO:0048653 "anther development"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005524 EMBL:CP002688 SUPFAM:SSF56112
GO:GO:0004674 InterPro:IPR013210 Pfam:PF08263 UniGene:At.27847
IPI:IPI00656935 RefSeq:NP_001032080.1 ProteinModelPortal:F4K6B8
SMR:F4K6B8 PRIDE:F4K6B8 EnsemblPlants:AT5G56040.2 GeneID:835702
KEGG:ath:AT5G56040 OMA:CLPPILH PhylomeDB:F4K6B8 Uniprot:F4K6B8
Length = 1090
Score = 202 (76.2 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 72/259 (27%), Positives = 122/259 (47%)
Query: 3 TDLNWLFLNNNRLK-SLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNR 60
T+L L+L N + S+ +G L KLQ L++ QN L +P+++ +L + + N
Sbjct: 265 TELQNLYLYQNSISGSIPVSMGRLKKLQSLLLWQNNLVGKIPTELGTCPELFLVDLSENL 324
Query: 61 IT-SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG-L 118
+T ++ L LQ + NQ++ +E N L + + NNQI+ L G L
Sbjct: 325 LTGNIPRSFGNLPNLQELQLSVNQLSGTIPEELANCTKLTHLEIDNNQISGEIPPLIGKL 384
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
T L + NQLT + + + + L+ +DLSYN ++ G+ G +++ +T +L
Sbjct: 385 TSLTMFFAWQNQLTGIIPESLSQCQELQAIDLSYNNLS--GSIPNGIFEIRNLT---KLL 439
Query: 179 LQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L N + +G L RL L+ N+L P + L +L +DIS N L
Sbjct: 440 LLSNYLSGFIPPDIGNCTNLYRLRLNGNRLAGNIPAEIGNLKNLNFIDISENRLIGNIPP 499
Query: 238 SKTFLPALEELFVSHNSLT 256
+ +LE + + N LT
Sbjct: 500 EISGCTSLEFVDLHSNGLT 518
Score = 153 (58.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 69/256 (26%), Positives = 114/256 (44%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNR 60
L DL+ L N +S G L L +LQL V NQL +P ++ ++L L +NN+
Sbjct: 317 LVDLSENLLTGNIPRSF-GNLPNLQELQLSV---NQLSGTIPEELANCTKLTHLEIDNNQ 372
Query: 61 ITS-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSLSGL 118
I+ + L+ LT L +F NQ+T + + L +I L N ++ S+ + + +
Sbjct: 373 ISGEIPPLIGKLTSLTMFFAWQNQLTGIIPESLSQCQELQAIDLSYNNLSGSIPNGIFEI 432
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L L N L+ F+ DI L + L+ N++ ++ + N+ +
Sbjct: 433 RNLTKLLLLSNYLSGFIPPDIGNCTNLYRLRLNGNRL-----AGNIPAEIGNLKNLNFID 487
Query: 179 LQHNE-IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
+ N I N+ + G L +DL N L P SL+ +D+S N LT T
Sbjct: 488 ISENRLIGNIPPEISGCTSLEFVDLHSNGLTGGLPGTLP--KSLQFIDLSDNSLTGSLPT 545
Query: 238 SKTFLPALEELFVSHN 253
L L +L ++ N
Sbjct: 546 GIGSLTELTKLNLAKN 561
Score = 129 (50.5 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 61/241 (25%), Positives = 110/241 (45%)
Query: 3 TDLNWLFLNNNRLK-SLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNR 60
T+L L LN NRL ++ ++G L L + I +N+L +P +I + L + ++N
Sbjct: 457 TNLYRLRLNGNRLAGNIPAEIGNLKNLNFIDISENRLIGNIPPEISGCTSLEFVDLHSNG 516
Query: 61 ITSLDGLLRGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGL 118
+T GL L K LQ ++ N +T +L L ++L N+ + + +S
Sbjct: 517 LTG--GLPGTLPKSLQFIDLSDNSLTGSLPTGIGSLTELTKLNLAKNRFSGEIPREISSC 574
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN-KINKFGTRNEGKNQVQGVTNIFEL 177
L L L N T + ++ L R+ ++ +S N N F E ++ +TN+ L
Sbjct: 575 RSLQLLNLGDNGFTGEIPNE---LGRIPSLAISLNLSCNHF--TGEIPSRFSSLTNLGTL 629
Query: 178 KLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDD-FIGLDSLKMLDISHNL-LTTLE 235
+ HN++ L + L L++S N+ P+ F L +L+ + L ++T
Sbjct: 630 DVSHNKLAGNLNVLADLQNLVSLNISFNEFSGELPNTLFFRKLPLSVLESNKGLFISTRP 689
Query: 236 E 236
E
Sbjct: 690 E 690
Score = 128 (50.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 72/284 (25%), Positives = 115/284 (40%)
Query: 2 LTDLNWLFLNN-NRLKSLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNN 59
+ L L L + N S+ +LG LS+L++L + N L +P DI +L L N N
Sbjct: 95 IKSLTLLSLTSVNLTGSIPKELGDLSELEVLDLADNSLSGEIPVDIFKLKKLKILSLNTN 154
Query: 60 RITS-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT--SMNSSLS 116
+ + L L L + N++ L NL+ N+ + +
Sbjct: 155 NLEGVIPSELGNLVNLIELTLFDNKLAGEIPRTIGELKNLEIFRAGGNKNLRGELPWEIG 214
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L L+ L+ L I LK+++T+ L Y + +E + T +
Sbjct: 215 NCESLVTLGLAETSLSGRLPASIGNLKKVQTIAL-YTSLLSGPIPDE----IGNCTELQN 269
Query: 177 LKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLE 235
L L N I MG + L L L N L P + L ++D+S NLLT
Sbjct: 270 LYLYQNSISGSIPVSMGRLKKLQSLLLWQNNLVGKIPTELGTCPELFLVDLSENLLTGNI 329
Query: 236 ETSKTFLPALEELFVSHNSLT-RLDKDFHGLPVLCKADLAHNNI 278
S LP L+EL +S N L+ + ++ L ++ +N I
Sbjct: 330 PRSFGNLPNLQELQLSVNQLSGTIPEELANCTKLTHLEIDNNQI 373
Score = 126 (49.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 62/228 (27%), Positives = 99/228 (43%)
Query: 12 NNRLKSLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRIT-SLDGLLR 69
NN S+ + + L L++ N L +P DI + L L N NR+ ++ +
Sbjct: 419 NNLSGSIPNGIFEIRNLTKLLLLSNYLSGFIPPDIGNCTNLYRLRLNGNRLAGNIPAEIG 478
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG-LTK-LAYLYLS 127
L L ++ N++ E +L+ + L +N +T L G L K L ++ LS
Sbjct: 479 NLKNLNFIDISENRLIGNIPPEISGCTSLEFVDLHSNGLTG---GLPGTLPKSLQFIDLS 535
Query: 128 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN----E 183
N LT L I L L ++L+ N+ + E ++ ++ L L N E
Sbjct: 536 DNSLTGSLPTGIGSLTELTKLNLAKNRFS-----GEIPREISSCRSLQLLNLGDNGFTGE 590
Query: 184 IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
I N G + + +S L+LS N P F L +L LD+SHN L
Sbjct: 591 IPNELGRIPSL-AIS-LNLSCNHFTGEIPSRFSSLTNLGTLDVSHNKL 636
Score = 45 (20.9 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 263 HGLPVL---CKADLAHNNIKAINIQLALKTQCQI--FGL 296
H L L C + H ++KA+N+ L + + + FGL
Sbjct: 865 HALAYLHHDCLPPILHGDVKAMNVLLGSRFESYLADFGL 903
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 199 (75.1 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 67/250 (26%), Positives = 123/250 (49%)
Query: 29 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 88
+++ + +N L +P I ++L +L+ N +I ++ + L L++ + N I +
Sbjct: 59 KVICVRKN-LRDVPDGISTNTRLLNLHENQIQIIKVNSF-KHLRHLEILQLSRNHIRTIE 116
Query: 89 RDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 147
F L NL+++ L +N++T++ N + L+KL L+L +N + + LR
Sbjct: 117 IGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRR 176
Query: 148 VDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKL 207
+DL ++ + +EG +G++N+ L L + + L + L LDLS N L
Sbjct: 177 LDLG--ELKRLSYISEGA--FEGLSNLRYLNLAMCNLREIPN-LTPLIKLDELDLSGNHL 231
Query: 208 RTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLP 266
I P F GL L+ L + + + +E + L +L E+ ++HN+LT L D F L
Sbjct: 232 SAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 291
Query: 267 VLCKADLAHN 276
L + L HN
Sbjct: 292 HLERIHLHHN 301
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 1 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----Y 55
GL +LN L L +NRL ++ G LSKL+ L + N +E++PS F+++ SL
Sbjct: 122 GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS--YAFNRIPSLRRLDL 179
Query: 56 ANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-S 113
R++ + +G GL+ L+ N+ + + L LD + L N ++++
Sbjct: 180 GELKRLSYISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPG 237
Query: 114 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
S GL L L++ +Q+ + L+ L ++L++N +
Sbjct: 238 SFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 279
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 200 (75.5 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 81/289 (28%), Positives = 126/289 (43%)
Query: 35 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 94
QN E +P+ I +Q L N R+ + L L ++ Q+ +V F+
Sbjct: 48 QNLTE-VPNAIPELTQRLDLRGNVLRVIP-PAAFQDLPYLTHLDLRHCQVELVAEGAFRG 105
Query: 95 LHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 153
L L ++L +N+++++ +L GL L L L N L E L L T++L++N
Sbjct: 106 LGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHN 165
Query: 154 KINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISP 212
+ QG+ L+L HN + L AL G+ L RL L HN+L+++
Sbjct: 166 ALVYLPPM-----AFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPG 220
Query: 213 DDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLD-KDFHGLPVLCKA 271
L L++ HN T E LP L EL + H +L LD + F P L
Sbjct: 221 LALSQARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTL 280
Query: 272 DLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVID 320
DL N + A+ L Q G R+ L+GNP+ C R +++
Sbjct: 281 DLRGNQLDAL-----LPPQ----GPGQLRRLQLQGNPLWCGCRARPLLE 320
Score = 180 (68.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 62/188 (32%), Positives = 92/188 (48%)
Query: 75 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTE 133
Q+ ++ N +V R FQ L L S+ LQ+ IT + + +L+GL L YLYLS N L+
Sbjct: 421 QLLDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSG 480
Query: 134 FLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALM 192
+ G RL + Y + N+F + G + + ++F L LQ N ++ L G L
Sbjct: 481 LSATALEGAPRLGYL---YLERNRF-LQVPGA-ALGALPSLFSLHLQDNAVDRLAPGDLA 535
Query: 193 GIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSH 252
G L L LS N+L +SP L+ L + N L + + LPAL EL +S
Sbjct: 536 GGRALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSG 595
Query: 253 NSLTRLDK 260
N L L +
Sbjct: 596 NPLRALQE 603
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 63/220 (28%), Positives = 93/220 (42%)
Query: 19 EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQV 76
EG L +L LL + N+L ALP + + L L N + L G L L
Sbjct: 100 EGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALAT 159
Query: 77 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEF- 134
N+ N + + FQ L + L +N ++ + +L+GL L L L HN+L
Sbjct: 160 LNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLP 219
Query: 135 --LLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-AL 191
L RGL RL +L +N G +G + + EL+L+H ++ LD A
Sbjct: 220 GLALSQARGLARL---ELGHNPFTYAG-EEDGL----ALPGLRELRLEHGALQALDPRAF 271
Query: 192 MGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
L LDL N+L + P G L+ L + N L
Sbjct: 272 AHCPRLHTLDLRGNQLDALLPPQ--GPGQLRRLQLQGNPL 309
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 65/232 (28%), Positives = 103/232 (44%)
Query: 22 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMD 80
LG L L L +LEA + L LY ++N ++ L L G +L ++
Sbjct: 441 LGRLVSLHLQHCGITELEA--GALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLE 498
Query: 81 FNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDI 139
N+ V L +L S+ LQ+N + + L+G L +LYLS N+LT+ +
Sbjct: 499 RNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGAL 558
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGI-HGL 197
+ L + L N++ + T ++G+ + EL+L N + L +GA + L
Sbjct: 559 GPAQELEKLHLDRNQLPEVPTE-----ALEGLPALLELQLSGNPLRALQEGAFRPVGRSL 613
Query: 198 SRLDLSHNKLRTISPDDFIGLD-SLKMLDISHNLLTTLEETSKTFLPALEEL 248
L L+ + L ISP F GL L+ L + N L L LP L +L
Sbjct: 614 QHLFLNSSGLEQISPGAFSGLGPQLQSLYLQKNQLQALPP-----LPGLRQL 660
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/184 (26%), Positives = 83/184 (45%)
Query: 101 ISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ L+ N + ++ GL +L L+L H +TE + GL L + LS N G
Sbjct: 423 LDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDN-----G 477
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENLDGALMG-IHGLSRLDLSHNKLRTISPDDFIGL 218
++G + L L+ N + GA +G + L L L N + ++P D G
Sbjct: 478 LSGLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGG 537
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
+L+ L +S N LT + + LE+L + N L + + GLP L + L+ N
Sbjct: 538 RALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNP 597
Query: 278 IKAI 281
++A+
Sbjct: 598 LRAL 601
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 57/210 (27%), Positives = 90/210 (42%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANN 58
GL L +L+L++N L L L +L L +E+N+ +P + + L SL+ +
Sbjct: 464 GLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQD 523
Query: 59 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 116
N + L G L G L+ + N++T V L+ + L NQ+ + +L
Sbjct: 524 NAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALE 583
Query: 117 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGV-TNIF 175
GL L L LS N L R + R L + +N G G+ +
Sbjct: 584 GLPALLELQLSGNPLRALQEGAFRPVGR----SLQHLFLNSSGLEQISPGAFSGLGPQLQ 639
Query: 176 ELKLQHNEIENLDGALMGIHGLSRLDLSHN 205
L LQ N+++ L L G+ L +DLS N
Sbjct: 640 SLYLQKNQLQALP-PLPGLRQLELIDLSGN 668
Score = 84 (34.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 38/137 (27%), Positives = 62/137 (45%)
Query: 1 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANN 58
GL WL L++N L L + L L L+ L + N+L++LP + L L +
Sbjct: 177 GLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGH 236
Query: 59 NRITSL---DGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 114
N T DGL L GL +L+ ++ + + F + L ++ L+ NQ+ ++
Sbjct: 237 NPFTYAGEEDGLALPGLRELR---LEHGALQALDPRAFAHCPRLHTLDLRGNQLDALLPP 293
Query: 115 LSGLTKLAYLYLSHNQL 131
G +L L L N L
Sbjct: 294 -QGPGQLRRLQLQGNPL 309
Score = 81 (33.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 50/174 (28%), Positives = 75/174 (43%)
Query: 140 RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG-ALMGIHGLS 198
+GL RL ++ L + I T E + G+ ++ L L N + L AL G L
Sbjct: 439 QGLGRLVSLHLQHCGI----TELEA-GALAGLGSLIYLYLSDNGLSGLSATALEGAPRLG 493
Query: 199 RLDLSHNKLRTISPDDFIG-LDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTR 257
L L N+ + P +G L SL L + N + L AL L++S N LT+
Sbjct: 494 YLYLERNRFLQV-PGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQ 552
Query: 258 LDKDFHGLPV--LCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPV 309
+ G P L K L N + + + AL+ GL + L + L GNP+
Sbjct: 553 VSPGALG-PAQELEKLHLDRNQLPEVPTE-ALE------GLPALLELQLSGNPL 598
>RGD|1302973 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor 1"
species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IEA;ISO]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IMP] [GO:0007567 "parturition"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030198
"extracellular matrix organization" evidence=IEA;ISO] [GO:0042562
"hormone binding" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060427 "lung connective tissue development"
evidence=IEA;ISO] [GO:0060658 "nipple morphogenesis"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 RGD:1302973 GO:GO:0016021 GO:GO:0005886 GO:GO:0030154
GO:GO:0046872 GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
HSSP:P01130 GO:GO:0060427 CTD:59350 HOVERGEN:HBG026354 KO:K04306
GO:GO:0060658 HOGENOM:HOG000049056 OrthoDB:EOG4NGGM1 EMBL:AY509976
IPI:IPI00409992 RefSeq:NP_958820.1 UniGene:Rn.109230
ProteinModelPortal:Q6R6I6 SMR:Q6R6I6 STRING:Q6R6I6
PhosphoSite:Q6R6I6 PRIDE:Q6R6I6 GeneID:295144 KEGG:rno:295144
UCSC:RGD:1302973 InParanoid:Q6R6I6 NextBio:639021
Genevestigator:Q6R6I6 Uniprot:Q6R6I6
Length = 758
Score = 200 (75.5 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 63/229 (27%), Positives = 112/229 (48%)
Query: 26 SKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQ 83
S + ++ ++ N + LP + + + L L NN+I S+ RGL L + N+
Sbjct: 126 SNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNR 185
Query: 84 ITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDD--IR 140
IT ++ F++LH L+ + +++N ++ ++ + GL L L L +N LT L D +
Sbjct: 186 ITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTR-LPDKPLCQ 244
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSR 199
+ RL +D N+I+ RN N+ L ++ N+I +L + A + L
Sbjct: 245 HMPRLHWLDFEGNRIHNL--RNL---TFISCNNLTVLVMRKNKINHLNEHAFTHLQKLDE 299
Query: 200 LDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEEL 248
LDL NK+ + P+ F L L L+IS+N + +E +L L+ L
Sbjct: 300 LDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDYLAKLKSL 348
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 59/217 (27%), Positives = 107/217 (49%)
Query: 72 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQ 130
+ + V ++ +N I + + F+ H+L + LQNN+I S++ S+ GL L LYLSHN+
Sbjct: 126 SNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNR 185
Query: 131 LTEFLLDDI-RGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG 189
+T FL + L RL + + N +++ G+ ++ L L +N + L
Sbjct: 186 IT-FLKPGVFEDLHRLEWLIIEDNHLSRISPLT-----FYGLNSLILLVLMNNALTRLPD 239
Query: 190 ALMGIH--GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEE 247
+ H L LD N++ + FI ++L +L + N + L E + T L L+E
Sbjct: 240 KPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHAFTHLQKLDE 299
Query: 248 LFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINI 283
L + N + L + F L L + ++++N I+ I +
Sbjct: 300 LDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIEV 336
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 55/192 (28%), Positives = 93/192 (48%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANN 58
GL L L+L++NR+ L+ G L +L+ L+IE N L + P + L L N
Sbjct: 172 GLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMN 231
Query: 59 NRITSLDG--LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SL 115
N +T L L + + +L + + N+I +R F + +NL + ++ N+I +N +
Sbjct: 232 NALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHAF 291
Query: 116 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIF 175
+ L KL L L N++ + + LK L +++SYN I K NQ + +
Sbjct: 292 THLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIEV-----NQFDYLAKLK 346
Query: 176 ELKLQHNEIENL 187
L L+ EI N+
Sbjct: 347 SLSLEGIEISNI 358
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 55/223 (24%), Positives = 105/223 (47%)
Query: 28 LQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQIT 85
LQ L ++ N++ ++ S + L LY ++NRIT L G+ L +L+ ++ N ++
Sbjct: 152 LQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLS 211
Query: 86 MVRRDEFQNLHNLDSISLQNNQITSMNSS--LSGLTKLAYLYLSHNQLTEFLLDDIRGLK 143
+ F L++L + L NN +T + + +L +L N++
Sbjct: 212 RISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCN 271
Query: 144 RLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGALM-GIHGLSRLDL 202
L + + NKIN NE + + + EL L N+IENL + + LS+L++
Sbjct: 272 NLTVLVMRKNKINHL---NE--HAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNI 326
Query: 203 SHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPAL 245
S+N ++ I + F L LK L + ++ +++ + F P +
Sbjct: 327 SYNPIQKIEVNQFDYLAKLKSLSLEGIEISNIQQ--RMFRPLI 367
>RGD|1562857 [details] [associations]
symbol:Phlpp2 "PH domain and leucine rich repeat protein
phosphatase 2" species:10116 "Rattus norvegicus" [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0004722 "protein
serine/threonine phosphatase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO;IDA] [GO:0006470 "protein
dephosphorylation" evidence=IDA] [GO:0042622 "photoreceptor outer
segment membrane" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001932 Pfam:PF00481 PROSITE:PS51450 SMART:SM00332
RGD:1562857 GO:GO:0005737 GO:GO:0006470 GO:GO:0004722
Gene3D:2.30.29.30 InterPro:IPR011993 InterPro:IPR003591
SMART:SM00369 GO:GO:0001917 InterPro:IPR025875 Pfam:PF12799
Gene3D:3.60.40.10 SUPFAM:SSF81606 GO:GO:0042622
GeneTree:ENSGT00440000037833 OrthoDB:EOG48PMJB IPI:IPI00768703
ProteinModelPortal:D4A254 Ensembl:ENSRNOT00000021744
UCSC:RGD:1562857 Uniprot:D4A254
Length = 1359
Score = 203 (76.5 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 90/332 (27%), Positives = 155/332 (46%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
LT+LN L+ N L Q+G L LQ L ++ N L ALP ++ QL SL + N
Sbjct: 360 LTELN---LSCNGFHDLPSQIGNLLNLQTLCLDGNVLTALPDELGNLQQLTSLGISFNNF 416
Query: 62 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI-TSMNSSLSGLTK 120
+ + +L LT L M N++ ++ ++++ + L+ N + T + +L G
Sbjct: 417 SQIPEVLEKLTMLDKVVMAGNRLEILNLGVLTRMNHVKHVDLRMNHLKTVIIENLEGNKH 476
Query: 121 LAYLYLSHNQLTEFLLDDIRGLKRLRTV--DLSYNKINKFGTRN--EGKNQVQGVTNIF- 175
+ ++ L NQLT+ L + L++L L ++ F RN N++ V N++
Sbjct: 477 ITHMDLRDNQLTDLDLSSLCSLEQLHCERNQLRELTLSGFSLRNLYANWNKLTAV-NVYP 535
Query: 176 ------ELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHN 229
L+L N +E + L LD+S+N L + P + SL+ L + HN
Sbjct: 536 VPSLLTSLELSRNLLECIPDWACEAKKLEILDISYNLLTEV-PMRILSSLSLRKLMVGHN 594
Query: 230 LLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKA-DLAHNNIKAINIQLALK 288
+ L + +P LE L V HN+L+RL + KA +L + N A +++ +L
Sbjct: 595 HIHVLPALVE-HIP-LEVLDVQHNTLSRLPDT-----LFSKALNLRYLNASANSLE-SLP 646
Query: 289 TQCQIFGLNSTLRI-YLEGNPVLCDDSMRAVI 319
+ C S L++ YL N +L D + ++
Sbjct: 647 SACAGEESLSVLQLLYLTNN-LLTDQCIPVLV 677
Score = 188 (71.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 88/339 (25%), Positives = 152/339 (44%)
Query: 3 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 62
+ L L L++N+L L +S L L + N LPS I L +L + N +T
Sbjct: 335 SQLKGLNLSHNKLGLFPVLLCEISTLTELNLSCNGFHDLPSQIGNLLNLQTLCLDGNVLT 394
Query: 63 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKL 121
+L L L +L + FN + + + + L LD + + N++ +N L+ + +
Sbjct: 395 ALPDELGNLQQLTSLGISFNNFSQIP-EVLEKLTMLDKVVMAGNRLEILNLGVLTRMNHV 453
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE-GKNQVQGVTN-IFELKL 179
++ L N L +++++ G K + +DL N++ + Q+ N + EL L
Sbjct: 454 KHVDLRMNHLKTVIIENLEGNKHITHMDLRDNQLTDLDLSSLCSLEQLHCERNQLRELTL 513
Query: 180 QHNEIENLDG---ALMGIHG------LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
+ NL L ++ L+ L+LS N L I PD L++LDIS+NL
Sbjct: 514 SGFSLRNLYANWNKLTAVNVYPVPSLLTSLELSRNLLECI-PDWACEAKKLEILDISYNL 572
Query: 231 LTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQ 290
LT + + L +L +L V HN + L +P L D+ HN + + L K
Sbjct: 573 LTEVPMRILSSL-SLRKLMVGHNHIHVLPALVEHIP-LEVLDVQHNTLSRLPDTLFSKA- 629
Query: 291 CQIFGLNSTLRIYLEGNPVLC--DDSMRAVIDAMETINN 327
+ LN++ LE P C ++S+ +V+ + NN
Sbjct: 630 LNLRYLNASANS-LESLPSACAGEESL-SVLQLLYLTNN 666
Score = 158 (60.7 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 66/254 (25%), Positives = 120/254 (47%)
Query: 5 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 64
L L L+ N L+ + KL++L I N L +P I L L +N I L
Sbjct: 540 LTSLELSRNLLECIPDWACEAKKLEILDISYNLLTEVPMRILSSLSLRKLMVGHNHIHVL 599
Query: 65 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG---LTKL 121
L+ + L+V ++ N ++ + F NL ++ N + S+ S+ +G L+ L
Sbjct: 600 PALVEHIP-LEVLDVQHNTLSRLPDTLFSKALNLRYLNASANSLESLPSACAGEESLSVL 658
Query: 122 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQH 181
LYL++N LT+ + + G LR + L+ N++ F K + + EL L
Sbjct: 659 QLLYLTNNLLTDQCIPVLVGHPHLRVLHLANNQLQTFPASKLNK-----LEQLEELNLSG 713
Query: 182 NEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF 241
N+++ + + L L ++H +I P+ + L ++ +D+S N LT + +T
Sbjct: 714 NKLKAIPTTIANCKRLHTL-VAHANNISIFPE-ILQLPQIQFVDLSCNDLTEIL-IPET- 769
Query: 242 LPA-LEELFVSHNS 254
LPA L++L ++ N+
Sbjct: 770 LPATLQDLDLTGNT 783
Score = 139 (54.0 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 63/239 (26%), Positives = 115/239 (48%)
Query: 48 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 107
FSQL L ++N++ LL ++ L N+ N + + NL NL ++ L N
Sbjct: 334 FSQLKGLNLSHNKLGLFPVLLCEISTLTELNLSCNGFHDLP-SQIGNLLNLQTLCLDGNV 392
Query: 108 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK-N 166
+T++ L L +L L +S N ++ + ++ L++L +D N+ N G
Sbjct: 393 LTALPDELGNLQQLTSLGISFNNFSQ--IPEV--LEKLTMLDKVVMAGNRLEILNLGVLT 448
Query: 167 QVQGVTNIFELKLQHNE---IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKM 223
++ V ++ +L++ H + IENL+G H ++ +DL N+L + D L SL+
Sbjct: 449 RMNHVKHV-DLRMNHLKTVIIENLEG---NKH-ITHMDLRDNQLTDL---DLSSLCSLEQ 500
Query: 224 LDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKDFHGLP-VLCKADLAHNNIKAI 281
L N L L T F +L L+ + N LT ++ + +P +L +L+ N ++ I
Sbjct: 501 LHCERNQLREL--TLSGF--SLRNLYANWNKLTAVN--VYPVPSLLTSLELSRNLLECI 553
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 78/331 (23%), Positives = 142/331 (42%)
Query: 10 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 69
L +N+L L+ L +L L+ L E+NQL L + FS L +LYAN N++T+++ +
Sbjct: 482 LRDNQLTDLD--LSSLCSLEQLHCERNQLRELT--LSGFS-LRNLYANWNKLTAVN-VYP 535
Query: 70 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 129
+ L + N + + D L+ + + N +T + + L L + HN
Sbjct: 536 VPSLLTSLELSRNLLECIP-DWACEAKKLEILDISYNLLTEVPMRILSSLSLRKLMVGHN 594
Query: 130 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDG 189
+ +L + L +D+ +N +++ K N+ L N +E+L
Sbjct: 595 HI--HVLPALVEHIPLEVLDVQHNTLSRLPDTLFSK-----ALNLRYLNASANSLESLPS 647
Query: 190 ALMGIHGLSRLDL---SHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALE 246
A G LS L L ++N L +G L++L +++N L T + L LE
Sbjct: 648 ACAGEESLSVLQLLYLTNNLLTDQCIPVLVGHPHLRVLHLANNQLQTFPASKLNKLEQLE 707
Query: 247 ELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEG 306
EL +S N L + L +AH N +I ++ Q Q L+ +
Sbjct: 708 ELNLSGNKLKAIPTTIANCKRLHTL-VAHANNISIFPEILQLPQIQFVDLSCN-----DL 761
Query: 307 NPVLCDDSMRAVIDAME-TINNNTKIHGETI 336
+L +++ A + ++ T N N + +T+
Sbjct: 762 TEILIPETLPATLQDLDLTGNTNLVLEHKTL 792
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 151 (58.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 79/281 (28%), Positives = 127/281 (45%)
Query: 10 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-G 66
L N +KS+ G KL+ + + NQ+ L P Q L SL N+IT L G
Sbjct: 309 LEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRG 368
Query: 67 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLY 125
+ GL LQ+ ++ N+I +R + FQ+L NL +SL +N+I ++ + S L + L+
Sbjct: 369 VFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTLH 428
Query: 126 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQG--VTNIFELKLQHNE 183
L+ N F+ D LK L L N I G R ++ + I K + +
Sbjct: 429 LAQNP---FICDC--NLKWLADY-LRSNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA 482
Query: 184 IENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLP 243
E A+ G SRL+ N + P +S ++D S+ L + E +P
Sbjct: 483 KEQY--AIPGTED-SRLNNDCNN-DPVCPAK-CRCES-NVVDCSNLRLDRIPE----HVP 532
Query: 244 A-LEELFVSHNSLTRLDK--DFHGLPVLCKADLAHNNIKAI 281
A E +++N +T ++ F L L K +L++N I I
Sbjct: 533 ASTTEPRLNNNEITTIEAMGAFKTLTHLKKINLSNNKISEI 573
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/157 (29%), Positives = 76/157 (48%)
Query: 124 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNE 183
L L+ N LT +D GLK LR + L N+I T G + + L+L N+
Sbjct: 59 LELNGNNLTRINRNDFTGLKYLRVLQLMENQIV---TVERGA--FDEMRELERLRLNRNQ 113
Query: 184 IENLDGALMGIHG-LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFL 242
+ L L + LSRLDLS N ++ I F G +K L + N ++ +E+ + +
Sbjct: 114 LHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAM 173
Query: 243 PALEELFVSHNSLTRLD-KDFHGLPVLCKADLAHNNI 278
LE L +++N+++ + F+ +P L L NN+
Sbjct: 174 RGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNL 210
Score = 133 (51.9 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 176 ELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
E++L+ N I+++ GA L R+DLS+N++ ++PD F GL SL L + N +T L
Sbjct: 306 EIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDL 365
Query: 235 EETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNNIKAINIQLALKTQCQI 293
L AL+ L ++ N + L + F L L L N I+ LA T
Sbjct: 366 PRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQT----LAKGT---F 418
Query: 294 FGLNSTLRIYLEGNPVLCDDSMRAVIDAMET 324
L + ++L NP +CD +++ + D + +
Sbjct: 419 SSLRAIQTLHLAQNPFICDCNLKWLADYLRS 449
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 47/156 (30%), Positives = 73/156 (46%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQL---TEFLLD 137
N +T + R++F L L + L NQI ++ + + +L L L+ NQL E L
Sbjct: 64 NNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQ 123
Query: 138 DIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHG 196
L RL DLS N I + +G T+I L+L N I + DGA + G
Sbjct: 124 KNAALSRL---DLSENFIQAIP-----RKAFRGATDIKNLQLDKNHISCIEDGAFRAMRG 175
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDI-SHNLL 231
L L L++N + +I F + L+ + S+NL+
Sbjct: 176 LEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLV 211
Score = 123 (48.4 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 1 GLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 58
GL L L L N++ ++E G + +L+ L + +NQL LP + Q + L L +
Sbjct: 76 GLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSE 135
Query: 59 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLS 116
N I ++ RG T ++ +D N I+ + F+ + L+ ++L NN I+S+ SS +
Sbjct: 136 NFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISSIPVSSFN 195
Query: 117 GLTKLAYLYLSHNQL 131
+ KL L N L
Sbjct: 196 HMPKLRTFRLHSNNL 210
Score = 121 (47.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 34/125 (27%), Positives = 62/125 (49%)
Query: 34 EQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEF 92
E +EA+ + + + L + +NN+I+ + DG G + + ++ NQ+ + F
Sbjct: 544 EITTIEAMGA-FKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMF 602
Query: 93 QNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 151
+ L L + L+NN+I+ + N+S +GL + L L N LT L+ L T++L
Sbjct: 603 RGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLL 662
Query: 152 YNKIN 156
N N
Sbjct: 663 ANPFN 667
Score = 118 (46.6 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 33/125 (26%), Positives = 65/125 (52%)
Query: 10 LNNNRLKSLE--GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT-SLD 65
LNNN + ++E G TL+ L+ + + N++ + + S + L+ N++ +
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHS 599
Query: 66 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYL 124
G+ RGL L++ + N+I+ + + F LHN+ +SL +N +T++ + L L+ L
Sbjct: 600 GMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTL 659
Query: 125 YLSHN 129
L N
Sbjct: 660 NLLAN 664
Score = 105 (42.0 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
T E + +T++ ++ L +N+I + DGA G ++ L L+ N+L F GL
Sbjct: 546 TTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGL 605
Query: 219 DSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLTRLDKD-FHGLPVLCKADLAHNN 277
+ L+ML + +N ++ + S T L + L + N+LT + F L L +L N
Sbjct: 606 EGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANP 665
Query: 278 IKAINIQLA 286
N +LA
Sbjct: 666 FNC-NCRLA 673
Score = 105 (42.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 57 NNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 114
NNN IT+++ G + LT L+ N+ N+I+ + F+ +++ + L NQ+ +S
Sbjct: 541 NNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSG 600
Query: 115 L-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 155
+ GL L L L +N+++ + GL +R + L N +
Sbjct: 601 MFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTL 642
Score = 101 (40.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ L L N+L T+ P + SL+++D+S+N +++L +S T + L L +S+N+L
Sbjct: 756 ITELYLDGNQLSTV-PKELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALR 814
Query: 257 RLDK-DFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSM 315
+ F GL L L N+I + + Q S + + NP+ CD +
Sbjct: 815 CIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQ-------SLSHLAIGANPLHCDCGL 867
Query: 316 RAVIDAMET 324
R + D ++T
Sbjct: 868 RWLSDWVKT 876
Score = 92 (37.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 23/86 (26%), Positives = 43/86 (50%)
Query: 173 NIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLT 232
NI EL L N++ + L L +DLS+N++ +++ F + L L +S+N L
Sbjct: 755 NITELYLDGNQLSTVPKELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALR 814
Query: 233 TLEETSKTFLPALEELFVSHNSLTRL 258
+ + + L +L L + N ++ L
Sbjct: 815 CIPTLAFSGLRSLRLLSLHGNDISEL 840
Score = 92 (37.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 2 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 59
LT L + L+NN++ +E G S + L + NQL+ S + + L L NN
Sbjct: 557 LTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNN 616
Query: 60 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
RI+ + + GL +++ ++ N +T + F L +L +++L N + N L+ L
Sbjct: 617 RISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPF-NCNCRLAWL 675
Query: 119 T 119
+
Sbjct: 676 S 676
Score = 77 (32.2 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 197 LSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSLT 256
++ + L N +++I P F L+ +D+S+N ++ L + L +L L + N +T
Sbjct: 304 MTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 363
Query: 257 RLDKD-FHGLPVLCKADLAHNNIKAI 281
L + F GL L L N I +
Sbjct: 364 DLPRGVFDGLHALQLLLLNANKIHCL 389
Score = 76 (31.8 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 179 LQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEET 237
L +N I +L + + + L+ L LS+N LR I F GL SL++L + N ++ L +
Sbjct: 784 LSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDG 843
Query: 238 SKTFLPALEELFVSHNSL 255
+ +L L + N L
Sbjct: 844 IFSDAQSLSHLAIGANPL 861
>ZFIN|ZDB-GENE-080327-24 [details] [associations]
symbol:prelp "proline/arginine-rich end leucine-rich
repeat protein" species:7955 "Danio rerio" [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-24 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00600000084286 CTD:5549 KO:K08125
PANTHER:PTHR24371:SF15 EMBL:CU459075 IPI:IPI00864506
RefSeq:XP_001923590.1 UniGene:Dr.134237 ProteinModelPortal:F1QY29
Ensembl:ENSDART00000103846 GeneID:100144408 KEGG:dre:100144408
NextBio:20791438 Bgee:F1QY29 Uniprot:F1QY29
Length = 378
Score = 194 (73.4 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 57/213 (26%), Positives = 113/213 (53%)
Query: 3 TDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
T+L W+ L NNR++S+E Q+ L L L +++N+L+ +P D+ + L L + N+I
Sbjct: 128 TELKWINLGNNRIRSVEKQVFEKLPNLLYLYMQRNELKEVPDDLP--AGLEQLRLSRNQI 185
Query: 62 TSLD-GLLRGLTKLQVFNMDFNQIT--MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+ + G + L + ++ N+I+ + ++ F++L NL ++L +N + M +++
Sbjct: 186 SKIPPGAFSKMEHLALLDLHHNRISDSSMGKNIFKDLKNLIQLNLAHNILRKMPANIPNT 245
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
L L+L N + E D + L V L+YN+I+ G V V+++ +L
Sbjct: 246 --LFQLFLDRNNIEEIPQDYFKNFASLAFVRLNYNQISDKGL----PKSVFNVSSLLDLH 299
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTIS 211
L HN++ N+ L L +L L++N + +++
Sbjct: 300 LAHNKLSNVP--LFNSE-LEQLHLNNNNIESVN 329
Score = 185 (70.2 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 61/232 (26%), Positives = 114/232 (49%)
Query: 54 LYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 112
LY NN I + + T+L+ N+ N+I V + F+ L NL + +Q N++ +
Sbjct: 109 LYLQNNYIDQVTAESFKNCTELKWINLGNNRIRSVEKQVFEKLPNLLYLYMQRNELKEVP 168
Query: 113 SSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGV 171
L +GL +L LS NQ+++ ++ L +DL +N+I+ + GKN + +
Sbjct: 169 DDLPAGLEQLR---LSRNQISKIPPGAFSKMEHLALLDLHHNRISD---SSMGKNIFKDL 222
Query: 172 TNIFELKLQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLL 231
N+ +L L HN + + + L +L L N + I D F SL + +++N +
Sbjct: 223 KNLIQLNLAHNILRKMPANIPNT--LFQLFLDRNNIEEIPQDYFKNFASLAFVRLNYNQI 280
Query: 232 TTLEETSKTF-LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAIN 282
+ F + +L +L ++HN L+ + F+ L + L +NNI+++N
Sbjct: 281 SDKGLPKSVFNVSSLLDLHLAHNKLSNVPL-FNS--ELEQLHLNNNNIESVN 329
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 44/161 (27%), Positives = 78/161 (48%)
Query: 123 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHN 182
YLYL +N + + + + L+ ++L N+I R+ K + + N+ L +Q N
Sbjct: 108 YLYLQNNYIDQVTAESFKNCTELKWINLGNNRI-----RSVEKQVFEKLPNLLYLYMQRN 162
Query: 183 EIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTF- 241
E++ + L GL +L LS N++ I P F ++ L +LD+ HN ++ F
Sbjct: 163 ELKEVPDDLPA--GLEQLRLSRNQISKIPPGAFSKMEHLALLDLHHNRISDSSMGKNIFK 220
Query: 242 -LPALEELFVSHNSLTRLDKDFHGLPVLCKADLAHNNIKAI 281
L L +L ++HN L ++ + L + L NNI+ I
Sbjct: 221 DLKNLIQLNLAHNILRKMPANIPN--TLFQLFLDRNNIEEI 259
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/245 (24%), Positives = 115/245 (46%)
Query: 103 LQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 161
LQNN I + + S T+L ++ L +N+ IR +++ + + N + + R
Sbjct: 111 LQNNYIDQVTAESFKNCTELKWINLGNNR--------IRSVEK-QVFEKLPNLLYLYMQR 161
Query: 162 NEGKNQVQGV-TNIFELKLQHNEIENLD-GALMGIHGLSRLDLSHNKLR--TISPDDFIG 217
NE K + + +L+L N+I + GA + L+ LDL HN++ ++ + F
Sbjct: 162 NELKEVPDDLPAGLEQLRLSRNQISKIPPGAFSKMEHLALLDLHHNRISDSSMGKNIFKD 221
Query: 218 LDSLKMLDISHNLLTTLEETSKTFLP-ALEELFVSHNSLTRLDKD-FHGLPVLCKADLAH 275
L +L L+++HN+L + +P L +LF+ N++ + +D F L L +
Sbjct: 222 LKNLIQLNLAHNILRKMPAN----IPNTLFQLFLDRNNIEEIPQDYFKNFASLAFVRLNY 277
Query: 276 NNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDDSMRAVIDAMETINNNTK-IHGE 334
N I + + +F ++S L ++L N + + ++ + NNN + ++G
Sbjct: 278 NQISDKGLPKS------VFNVSSLLDLHLAHNKLSNVPLFNSELEQLHLNNNNIESVNGT 331
Query: 335 TICQP 339
IC P
Sbjct: 332 EICPP 336
>MGI|MGI:2151110 [details] [associations]
symbol:Prelp "proline arginine-rich end leucine-rich repeat"
species:10090 "Mus musculus" [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0007569 "cell aging" evidence=IDA] [GO:0008201
"heparin binding" evidence=ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027216 PROSITE:PS51450 MGI:MGI:2151110 GO:GO:0005578
eggNOG:COG4886 GO:GO:0008201 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0007569 GeneTree:ENSGT00600000084286
HOGENOM:HOG000234447 HOVERGEN:HBG108061 CTD:5549 KO:K08125
OrthoDB:EOG44F69H PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:AF261888
EMBL:AF261887 EMBL:BC019775 IPI:IPI00122293 RefSeq:NP_473418.3
UniGene:Mm.214514 ProteinModelPortal:Q9JK53 SMR:Q9JK53
STRING:Q9JK53 PhosphoSite:Q9JK53 PaxDb:Q9JK53 PRIDE:Q9JK53
Ensembl:ENSMUST00000048432 GeneID:116847 KEGG:mmu:116847
InParanoid:Q9JK53 NextBio:369194 Bgee:Q9JK53 CleanEx:MM_PRELP
Genevestigator:Q9JK53 GermOnline:ENSMUSG00000041577 Uniprot:Q9JK53
Length = 378
Score = 194 (73.4 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 62/232 (26%), Positives = 113/232 (48%)
Query: 3 TDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 61
T L W+ L+NNR++ ++ + LG L L L +E+NQLE +PS + L L + N I
Sbjct: 122 TGLRWVNLDNNRIRKVDQRVLGKLPSLAFLYMEKNQLEEVPSALP--RNLEQLRLSQNLI 179
Query: 62 TSLD-GLLRGLTKLQVFNMDFNQIT--MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 118
+ + G+ L L + ++ N+++ + + D FQ L NL ++L +N + M +
Sbjct: 180 SRIPPGVFSKLENLLLLDLQHNRLSDGVFKADTFQGLKNLMQLNLAHNILRKMPPKVP-- 237
Query: 119 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
+ LYL N++ + L + ++YNK++ G N ++N+ L
Sbjct: 238 QAIHQLYLDSNKIETIPNGYFKDFPNLAFIRMNYNKLSDRGLPKNSFN----ISNLLVLH 293
Query: 179 LQHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNL 230
L HN+I N+ A+ + L L L++N + I+ + + D S +L
Sbjct: 294 LSHNKISNVP-AIS--NKLEHLYLNNNSIEKINGTQICPNNLVAFHDFSSDL 342
Score = 167 (63.8 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 74/254 (29%), Positives = 118/254 (46%)
Query: 82 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG-LTKLAYLYLSHNQLTEFLLDDIR 140
N IT + + FQN L ++L NN+I ++ + G L LA+LY+ NQL E R
Sbjct: 108 NFITELPLESFQNATGLRWVNLDNNRIRKVDQRVLGKLPSLAFLYMEKNQLEEVPSALPR 167
Query: 141 GLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKLQHNEIENLDGAL-----MGIH 195
L++LR LS N I++ K + N+ L LQHN + DG G+
Sbjct: 168 NLEQLR---LSQNLISRIPPGVFSK-----LENLLLLDLQHNRLS--DGVFKADTFQGLK 217
Query: 196 GLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSKTFLPALEELFVSHNSL 255
L +L+L+HN LR + P + L LD S+ + T K F P L + +++N L
Sbjct: 218 NLMQLNLAHNILRKMPPKVPQAIHQL-YLD-SNKIETIPNGYFKDF-PNLAFIRMNYNKL 274
Query: 256 TR--LDKDFHGLPVLCKADLAHNNIKAINIQLALKTQCQIFGLNSTLRIYLEGNPVLCDD 313
+ L K+ + L L+HN I N+ A+ + + LN+ + G + C +
Sbjct: 275 SDRGLPKNSFNISNLLVLHLSHNKIS--NVP-AISNKLEHLYLNNNSIEKINGTQI-CPN 330
Query: 314 SMRAVIDAMETINN 327
++ A D + N
Sbjct: 331 NLVAFHDFSSDLEN 344
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/141 (32%), Positives = 75/141 (53%)
Query: 120 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELKL 179
++ YLYL +N +TE L+ + LR V+L N+I K R GK + ++ L +
Sbjct: 99 RIHYLYLQNNFITELPLESFQNATGLRWVNLDNNRIRKVDQRVLGK-----LPSLAFLYM 153
Query: 180 QHNEIENLDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTLEETSK 239
+ N++E + AL L +L LS N + I P F L++L +LD+ HN L+ +
Sbjct: 154 EKNQLEEVPSALP--RNLEQLRLSQNLISRIPPGVFSKLENLLLLDLQHNRLSDGVFKAD 211
Query: 240 TF--LPALEELFVSHNSLTRL 258
TF L L +L ++HN L ++
Sbjct: 212 TFQGLKNLMQLNLAHNILRKM 232
>UNIPROTKB|F1NLZ4 [details] [associations]
symbol:FMOD "Fibromodulin" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450 GO:GO:0005615
GO:GO:0031012 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00600000084286 PANTHER:PTHR24371:SF11 IPI:IPI00587727
EMBL:AADN02066904 Ensembl:ENSGALT00000005608 OMA:FTLGSFC
Uniprot:F1NLZ4
Length = 380
Score = 194 (73.4 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 71/265 (26%), Positives = 127/265 (47%)
Query: 3 TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANN 58
T + +++ NN++ ++ EG ++L+ L + NQ+ + ++F++L +L Y NN
Sbjct: 109 TRMKYVYFQNNQITAIQEGAFDNATELEWLALHNNQISSEKMGKRVFAKLKNLERLYMNN 168
Query: 59 NRITSLDGLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
N +T + L R L +L ++ +NQI+ V + + L NL ++ L +N I M +SL G
Sbjct: 169 NNLTKMPSPLPRSLREL---HLSYNQISKVPSNALEGLENLTALYLSHNYIFEMGASLKG 225
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKR-LRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L LS+N L + + D GL L + L YN IN + + +
Sbjct: 226 LKSLILADLSYNHLRK--VPD--GLPMALEQLYLEYNYINAIPD-----DYFKVSPKLLY 276
Query: 177 LKLQHNEIEN--LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
+++ HN + N L + LDLS+N+L+ I P L++L + N
Sbjct: 277 VRMSHNSLTNQGLSTNTFNSSSILELDLSYNRLQKI-PRVSTNLENLYLQGNQIN----- 330
Query: 235 EETSKTFLPALEELFVSHNSLTRLD 259
E + +F ++ + S + RLD
Sbjct: 331 EFSISSFCTVVDVMNYSRLQVLRLD 355
Score = 151 (58.2 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 60/211 (28%), Positives = 103/211 (48%)
Query: 101 ISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ QNNQIT++ + T+L +L L +NQ++ + R +L+ ++ Y N
Sbjct: 114 VYFQNNQITAIQEGAFDNATELEWLALHNNQISSEKMGK-RVFAKLKNLERLYMNNN--- 169
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
N K ++ EL L +N+I + AL G+ L+ L LSHN + + GL
Sbjct: 170 --NLTKMPSPLPRSLRELHLSYNQISKVPSNALEGLENLTALYLSHNYIFEMGAS-LKGL 226
Query: 219 DSLKMLDISHNLLTTLEETSKTFLP-ALEELFVSHNSLTRLDKDFHGL-PVLCKADLAHN 276
SL + D+S+N L + + LP ALE+L++ +N + + D+ + P L ++HN
Sbjct: 227 KSLILADLSYNHLRKVPDG----LPMALEQLYLEYNYINAIPDDYFKVSPKLLYVRMSHN 282
Query: 277 NIKAINIQLALKTQCQIFGLNSTLRIYLEGN 307
++ N L+ T F +S L + L N
Sbjct: 283 SLT--NQGLSTNT----FNSSSILELDLSYN 307
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 53/186 (28%), Positives = 92/186 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNR 60
L +L L++NNN L + L L+ L + NQ+ +PS+ ++ L +LY ++N
Sbjct: 158 LKNLERLYMNNNNLTKMPSPLPR--SLRELHLSYNQISKVPSNALEGLENLTALYLSHNY 215
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT- 119
I + L+GL L + ++ +N + V D L+ + L+ N I ++ ++
Sbjct: 216 IFEMGASLKGLKSLILADLSYNHLRKVP-DGLPMA--LEQLYLEYNYINAIPDDYFKVSP 272
Query: 120 KLAYLYLSHNQLT-EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
KL Y+ +SHN LT + L + + +DLSYN++ K +V TN+ L
Sbjct: 273 KLLYVRMSHNSLTNQGLSTNTFNSSSILELDLSYNRLQKIP-------RVS--TNLENLY 323
Query: 179 LQHNEI 184
LQ N+I
Sbjct: 324 LQGNQI 329
>UNIPROTKB|P51887 [details] [associations]
symbol:FMOD "Fibromodulin" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 CTD:2331 HOGENOM:HOG000234447 HOVERGEN:HBG108061
KO:K08121 OrthoDB:EOG4CJVHR PANTHER:PTHR24371:SF11 EMBL:U34977
IPI:IPI00587727 PIR:S71876 RefSeq:NP_990298.1 UniGene:Gga.34364
ProteinModelPortal:P51887 GeneID:395814 KEGG:gga:395814
InParanoid:P51887 NextBio:20815882 Uniprot:P51887
Length = 380
Score = 194 (73.4 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 71/265 (26%), Positives = 127/265 (47%)
Query: 3 TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANN 58
T + +++ NN++ ++ EG ++L+ L + NQ+ + ++F++L +L Y NN
Sbjct: 109 TRMKYVYFQNNQITAIQEGAFDNATELEWLALHNNQISSEKMGKRVFAKLKNLERLYMNN 168
Query: 59 NRITSLDGLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 117
N +T + L R L +L ++ +NQI+ V + + L NL ++ L +N I M +SL G
Sbjct: 169 NNLTKMPSPLPRSLREL---HLSYNQISKVPSNALEGLENLTALYLSHNYIFEMGASLKG 225
Query: 118 LTKLAYLYLSHNQLTEFLLDDIRGLKR-LRTVDLSYNKINKFGTRNEGKNQVQGVTNIFE 176
L L LS+N L + + D GL L + L YN IN + + +
Sbjct: 226 LKSLILADLSYNHLRK--VPD--GLPMALEQLYLEYNYINAIPD-----DYFKVSPKLLY 276
Query: 177 LKLQHNEIEN--LDGALMGIHGLSRLDLSHNKLRTISPDDFIGLDSLKMLDISHNLLTTL 234
+++ HN + N L + LDLS+N+L+ I P L++L + N
Sbjct: 277 VRMSHNSLTNQGLSTNTFNSSSILELDLSYNRLQKI-PRVSTNLENLYLQGNQIN----- 330
Query: 235 EETSKTFLPALEELFVSHNSLTRLD 259
E + +F ++ + S + RLD
Sbjct: 331 EFSISSFCTVVDVMNYSRLQVLRLD 355
Score = 151 (58.2 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 60/211 (28%), Positives = 103/211 (48%)
Query: 101 ISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 159
+ QNNQIT++ + T+L +L L +NQ++ + R +L+ ++ Y N
Sbjct: 114 VYFQNNQITAIQEGAFDNATELEWLALHNNQISSEKMGK-RVFAKLKNLERLYMNNN--- 169
Query: 160 TRNEGKNQVQGVTNIFELKLQHNEIENL-DGALMGIHGLSRLDLSHNKLRTISPDDFIGL 218
N K ++ EL L +N+I + AL G+ L+ L LSHN + + GL
Sbjct: 170 --NLTKMPSPLPRSLRELHLSYNQISKVPSNALEGLENLTALYLSHNYIFEMGAS-LKGL 226
Query: 219 DSLKMLDISHNLLTTLEETSKTFLP-ALEELFVSHNSLTRLDKDFHGL-PVLCKADLAHN 276
SL + D+S+N L + + LP ALE+L++ +N + + D+ + P L ++HN
Sbjct: 227 KSLILADLSYNHLRKVPDG----LPMALEQLYLEYNYINAIPDDYFKVSPKLLYVRMSHN 282
Query: 277 NIKAINIQLALKTQCQIFGLNSTLRIYLEGN 307
++ N L+ T F +S L + L N
Sbjct: 283 SLT--NQGLSTNT----FNSSSILELDLSYN 307
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 53/186 (28%), Positives = 92/186 (49%)
Query: 2 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNR 60
L +L L++NNN L + L L+ L + NQ+ +PS+ ++ L +LY ++N
Sbjct: 158 LKNLERLYMNNNNLTKMPSPLPR--SLRELHLSYNQISKVPSNALEGLENLTALYLSHNY 215
Query: 61 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT- 119
I + L+GL L + ++ +N + V D L+ + L+ N I ++ ++
Sbjct: 216 IFEMGASLKGLKSLILADLSYNHLRKVP-DGLPMA--LEQLYLEYNYINAIPDDYFKVSP 272
Query: 120 KLAYLYLSHNQLT-EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGKNQVQGVTNIFELK 178
KL Y+ +SHN LT + L + + +DLSYN++ K +V TN+ L
Sbjct: 273 KLLYVRMSHNSLTNQGLSTNTFNSSSILELDLSYNRLQKIP-------RVS--TNLENLY 323
Query: 179 LQHNEI 184
LQ N+I
Sbjct: 324 LQGNQI 329
WARNING: HSPs involving 924 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 419 369 0.00085 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1174
No. of states in DFA: 595 (63 KB)
Total size of DFA: 207 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.05u 0.09s 35.14t Elapsed: 00:00:06
Total cpu time: 35.34u 0.10s 35.44t Elapsed: 00:00:06
Start: Thu Aug 15 10:55:38 2013 End: Thu Aug 15 10:55:44 2013
WARNINGS ISSUED: 2