BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4258
(245 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357612148|gb|EHJ67839.1| putative leucine-rich transmembrane protein [Danaus plexippus]
Length = 523
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 1/212 (0%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LT +D K + LL+ +N I+ I +A P ++ H+G N L SLN +LR L L+W+
Sbjct: 25 LTEEDFKDIQEVEHLLVADNQISKIERHAIPKRLKHAHLGVNKLNSLNGALRDLDSLDWI 84
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
F+N N LKS++ +L +K +L+ N+L LP D++ L SLY +N I SLDG
Sbjct: 85 FINANHLKSIDNELPVKAKKIVLIHAAHNELTNLPKDLRQMPSLESLYFYDNNIKSLDGA 144
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
L+ +L+ ++ FN+I + DEF L + + NQ+ S+N SL L L YL L+
Sbjct: 145 LQKSRRLKTISLSFNKIESLAEDEFSEAEMLADLDIGYNQLRSLNGSLRALRSLRYLNLT 204
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
HN LTEF L +I+GL+ L +DLS+NKI K
Sbjct: 205 HNFLTEFSLQEIKGLRGLAVIDLSHNKITKIS 236
>gi|242003810|ref|XP_002422869.1| leucine-rich transmembrane protein, putative [Pediculus humanus
corporis]
gi|212505751|gb|EEB10131.1| leucine-rich transmembrane protein, putative [Pediculus humanus
corporis]
Length = 543
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 128/216 (59%), Gaps = 1/216 (0%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
L +D G P L LLL N + I NA P T+R++H+G N+L +LN SLR L DL WL
Sbjct: 59 LLDEDFSGLPTLRHLLLPGNMLAKIESNALPKTMRRIHLGRNSLKNLNGSLRALNDLEWL 118
Query: 89 FLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
F+N N+L +L QL KL LL NQL LP ++Q + +GSL+ NN I SLD +
Sbjct: 119 FINGNQLTTLYEQLPPEAPKLILLHAAHNQLTKLPVELQNYPIMGSLFFYNNNIVSLDKV 178
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
L+ +L+ ++ N+I V DEF +D I L +N + ++N + + +L L L+
Sbjct: 179 LQKSRRLRRLHLTHNKIHTVSDDEFAETELMDDIQLGHNHLKNLNRAFLPMRRLRSLNLT 238
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE 243
HN L EF +IRGL+ L+ VDLS+NKI++ + E
Sbjct: 239 HNLLEEFSFQEIRGLQNLKIVDLSFNKISQLNGKME 274
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 45 LVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ- 101
L +N I + ++ F T + + +G N+L +LN + + L L L +N L+ Q
Sbjct: 190 LTHNKIHTVSDDEFAETELMDDIQLGHNHLKNLNRAFLPMRRLRSLNLTHNLLEEFSFQE 249
Query: 102 LGTLSKLQLLVIEQNQLEALPSD----IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ L L+++ + N++ L ++L +++ L +N I +L+G L G+ LQ
Sbjct: 250 IRGLQNLKIVDLSFNKISQLNGKMENLVELETRVEELRLEHNEIKALEGSLMGIHGLQKL 309
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 216
N+ N++ + D+F L +L + + N + +++ +S + L L L ++N L + L
Sbjct: 310 NLSHNKLMTIAPDDFIGLEDLTILDISYNLLQTLDETSKTFLPNLEELIANNNWL-QVLD 368
Query: 217 DDIRGLKRLRTVDLSYNKINKFG 239
D GL L +LS N+I+ G
Sbjct: 369 KDFHGLPVLCKAELSSNRIHTIG 391
>gi|193575713|ref|XP_001949578.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
[Acyrthosiphon pisum]
Length = 577
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 137/234 (58%), Gaps = 2/234 (0%)
Query: 11 HAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFN 70
H ++ ++DL H + S D + + T ++ NN+T I +FP T+RK+ + N
Sbjct: 150 HMPSIEVLDLA-RNSIHSVASGDFQSLSLMNTFVMATNNLTDITNGSFPTTLRKVQLAAN 208
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQLFS 129
NLT LN +LR +L WL+L+NNRLK+L+G+L + +L +L + +N+L LP ++
Sbjct: 209 NLTELNGNLRNQKELEWLYLSNNRLKNLDGELPIDNDRLIVLDVSKNRLTHLPPELNCLK 268
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L Y + N++T L+ L KL + N+I + DEF+ ++ + L NN I
Sbjct: 269 ALRYFYCSFNQLTGLNKTLSKSKKLVWLELTGNKIQELASDEFEEASMIEVLELSNNCIK 328
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE 243
+N SL LT+L+ + S+N+LTEF L +I+GLK L+ VDLS+N I+K +E
Sbjct: 329 HLNKSLLPLTQLSEINFSYNKLTEFSLAEIKGLKELKLVDLSHNTISKLSGHSE 382
>gi|345497379|ref|XP_003427975.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like isoform 1 [Nasonia vitripennis]
Length = 631
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 15/225 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ +DD K P L LL+ N+I + + PP ++ LHVG N+L SLN +LR L L WL
Sbjct: 177 IDADDFKYNPTLQYLLMAGNSIAEMVPGSLPPLVKHLHVGRNHLMSLNRTLRDLNQLEWL 236
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N N L SL+G+L + L++L N+L LP++ + +L SL+ +N+I SLDG
Sbjct: 237 LINANELTSLDGELPSSGHNLKMLYAADNKLTHLPAEFRFLHRLESLFLQHNQIGSLDGT 296
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM--------------NS 193
L+ +L+ + +N + ++ D+F L+ + L +N++TS+ NS
Sbjct: 297 LQKARRLKFLELSYNDLQVLTEDDFLEAEMLEDLELGHNKLTSLGGDGNVNADGTTTANS 356
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+L L L L L+HN+L+EF IRGL+ LR +DLS NKI +
Sbjct: 357 ALYPLKSLKCLNLTHNELSEFSFSSIRGLRELRMLDLSSNKIGRL 401
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Query: 46 VNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQL 102
VN + T +A P +++ L++ N L+ + +S+RGL +L L L++N++ L L
Sbjct: 346 VNADGTTTANSALYPLKSLKCLNLTHNELSEFSFSSIRGLRELRMLDLSSNKIGRL---L 402
Query: 103 GTLSKLQLLVIEQNQLEALPS--DIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNM 159
S + LV E+ + A S D++L +N + +L+G L G+ +LQ N+
Sbjct: 403 RGRSPTENLVEEEGEETAGASIQDMRL---------QHNELRNLEGSLFVGMKELQRLNL 453
Query: 160 DFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLL 216
N + T+ RD + L L + L N++T++ ++S + L L L SHN+L
Sbjct: 454 SHNALGPTIALRD-LRGLDGLRVLDLSYNELTTLEDTSETWLPSLEELNASHNRLVTLSE 512
Query: 217 DDIRGLKRLRTVDLSYNKIN 236
D RG L VD+S N+I+
Sbjct: 513 RDFRGFPGLCWVDVSDNRIS 532
>gi|345497381|ref|XP_003427976.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like isoform 2 [Nasonia vitripennis]
Length = 642
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 15/225 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ +DD K P L LL+ N+I + + PP ++ LHVG N+L SLN +LR L L WL
Sbjct: 177 IDADDFKYNPTLQYLLMAGNSIAEMVPGSLPPLVKHLHVGRNHLMSLNRTLRDLNQLEWL 236
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N N L SL+G+L + L++L N+L LP++ + +L SL+ +N+I SLDG
Sbjct: 237 LINANELTSLDGELPSSGHNLKMLYAADNKLTHLPAEFRFLHRLESLFLQHNQIGSLDGT 296
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM--------------NS 193
L+ +L+ + +N + ++ D+F L+ + L +N++TS+ NS
Sbjct: 297 LQKARRLKFLELSYNDLQVLTEDDFLEAEMLEDLELGHNKLTSLGGDGNVNADGTTTANS 356
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+L L L L L+HN+L+EF IRGL+ LR +DLS NKI +
Sbjct: 357 ALYPLKSLKCLNLTHNELSEFSFSSIRGLRELRMLDLSSNKIGRL 401
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 46 VNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRL-KSLEGQ 101
VN + T +A P +++ L++ N L+ + +S+RGL +L L L++N++ + L G+
Sbjct: 346 VNADGTTTANSALYPLKSLKCLNLTHNELSEFSFSSIRGLRELRMLDLSSNKIGRLLRGR 405
Query: 102 LGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNM 159
T + L LV+ QN L + + + + +N + +L+G L G+ +LQ N+
Sbjct: 406 SPTERTILSPLVVLQN-LVEEEGEETAGASIQDMRLQHNELRNLEGSLFVGMKELQRLNL 464
Query: 160 DFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLL 216
N + T+ RD + L L + L N++T++ ++S + L L L SHN+L
Sbjct: 465 SHNALGPTIALRD-LRGLDGLRVLDLSYNELTTLEDTSETWLPSLEELNASHNRLVTLSE 523
Query: 217 DDIRGLKRLRTVDLSYNKIN 236
D RG L VD+S N+I+
Sbjct: 524 RDFRGFPGLCWVDVSDNRIS 543
>gi|195125689|ref|XP_002007310.1| GI12870 [Drosophila mojavensis]
gi|193918919|gb|EDW17786.1| GI12870 [Drosophila mojavensis]
Length = 803
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 125/207 (60%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
DDLKG + L+L +NNIT + AFP ++ LH+G N L SLN SL LT+L+ LF+N
Sbjct: 151 DDLKGIQKITNLILPSNNITRLDRGAFPLSLLILHLGRNQLESLNGSLAELTNLHSLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + L+ +L SKL+LL+ N+LE LP+++ L ++ + NR+ S D +LR
Sbjct: 211 ANNISDLDKELPDGSKLRLLMAHNNRLEHLPANMATMDDLEIIHLHFNRLRSFDRVLRNA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L + N++ + +DEFQ+ LD+++L N I S+N SL + KL S N +
Sbjct: 271 QHLTELLANNNELEYLAQDEFQSCRQLDTLNLACNHIRSLNFSLHPMVKLTRGNFSFNDI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF ++++ G++ LR +DLSYN+I +
Sbjct: 331 EEFSMEELHGMRSLRVLDLSYNRIQRL 357
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDL---NWL 88
L+ L LL NN + ++ ++ F + L++ N++ SLN SL + L N+
Sbjct: 267 LRNAQHLTELLANNNELEYLAQDEFQSCRQLDTLNLACNHIRSLNFSLHPMVKLTRGNFS 326
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG--SLYANNNRITSLDG 146
F N+ S+E +L + L++L + N+++ L + +L L ++N+I +LD
Sbjct: 327 F-NDIEEFSME-ELHGMRSLRVLDLSYNRIQRLLPAHKHSPELALIDLRLDHNQIVTLDS 384
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLY 205
L GL+ L++ ++ N+I ++ + ++ L+ + L NQ+ + + L L L
Sbjct: 385 ALAGLSHLRILSLPENRIEYLQPGDLNGMNRLEILDLTANQLVELKQLETTLLPSLKILK 444
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+++N +T+ L D GL L V+L+ N+I+ +
Sbjct: 445 VAYNNITK-LEHDFYGLPMLCQVNLTNNQISSISSE 479
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 24/189 (12%)
Query: 62 IRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEG---------QLGTLSKLQLL 111
I KL + +N L SL RGL+++ +L + +N L + Q +S+ +
Sbjct: 87 IYKLRMQWNGLRSLPELPFRGLSNVTYLSVADNELDEIPKHVLNHMPLLQTFDISRCNIR 146
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ--VFNMDFNQITMVRR 169
V++Q+ L+ + ++ +L +N IT LD RG L + ++ NQ+ +
Sbjct: 147 VVQQDDLKGI-------QKITNLILPSNNITRLD---RGAFPLSLLILHLGRNQLESLN- 195
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
L NL S+ + N I+ ++ L +KL L ++HN E L ++ + L +
Sbjct: 196 GSLAELTNLHSLFINANNISDLDKELPDGSKL-RLLMAHNNRLEHLPANMATMDDLEIIH 254
Query: 230 LSYNKINKF 238
L +N++ F
Sbjct: 255 LHFNRLRSF 263
>gi|195375768|ref|XP_002046672.1| GJ13011 [Drosophila virilis]
gi|194153830|gb|EDW69014.1| GJ13011 [Drosophila virilis]
Length = 831
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 125/207 (60%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
DDLKG + L+L +NNIT + AFP ++ LH+G N + SLN SL LT L LF+N
Sbjct: 151 DDLKGIQMVTNLILPSNNITRLDRGAFPLSLLILHLGRNQIESLNGSLHELTKLQSLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + L+G+L SKL+LL+ N+LE LP ++ + L +++ + NR+ S D +LR
Sbjct: 211 ANNISDLDGELPDGSKLRLLMAHNNRLERLPGNMASMNDLETIHLHFNRLRSFDRVLRNA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L + N++ + +D+FQ +++++L N I S+NSSL + KL S N +
Sbjct: 271 QFLNELFANNNELEFLAQDDFQACRQMETLNLACNHIRSLNSSLHPMAKLKIGNFSFNDI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF ++++ GL+ L+ +DLSYN+I +
Sbjct: 331 DEFSMEELHGLRSLKILDLSYNRIQRL 357
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVG---FNNLTSLN-NSLRGLTD 84
L DD + + TL L N+I ++ + P + KL +G FN++ + L GL
Sbjct: 286 LAQDDFQACRQMETLNLACNHIRSLNSSLHP--MAKLKIGNFSFNDIDEFSMEELHGLRS 343
Query: 85 LNWLFLNNNRLK-------------------------SLEGQLGTLSKLQLLVIEQNQLE 119
L L L+ NR++ +L+ L LS L++L + +N++E
Sbjct: 344 LKILDLSYNRIQRLLPGHKHMPELPLIDLRLDHNQIITLDSALAGLSNLRILSLPENRIE 403
Query: 120 -ALPSDIQLFSQLGSLYANNNRITSLDGLLRGL-TKLQVFNMDFNQITMVRRDEFQNLHN 177
+P D+ ++L L +N++ L L L L++ + +N I+ + RD F L
Sbjct: 404 YIMPGDLNGMNRLEILDLTSNQLVELKQLETTLLPNLKILKVAYNNISKLERD-FYGLPV 462
Query: 178 LDSISLQNNQITSMNSSL 195
L ++L NNQIT+++S L
Sbjct: 463 LCQVNLTNNQITTISSEL 480
>gi|125978433|ref|XP_001353249.1| GA16850 [Drosophila pseudoobscura pseudoobscura]
gi|54642003|gb|EAL30752.1| GA16850 [Drosophila pseudoobscura pseudoobscura]
Length = 807
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 126/213 (59%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
DDLKG + L+L +NNIT + AFP ++ LH+G N + SLN SL L L LF+N
Sbjct: 151 DDLKGIQVVTNLILPSNNITRLDRGAFPQSLLILHLGRNQIESLNGSLHDLHVLQSLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + L+G+L S+L+LL+ N+LE LP+++ L +++ + NR+ S D +LR
Sbjct: 211 ANNISDLDGELPDGSRLRLLMAHNNRLERLPANMAGMRYLQTIHVHFNRLRSFDRVLRNS 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L+ N++ + +DEFQ LD + L +N I S+NSSL + KL S N +
Sbjct: 271 QDLEELLAGNNELEYLAQDEFQACGRLDVLHLASNHIRSLNSSLLPMVKLTIANFSFNDM 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
EF ++++ GL+ L+ +DLS+N+I++ +G
Sbjct: 331 EEFSMEELHGLRLLKRLDLSHNRISRLLPSTKG 363
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
L+ + L LL NN + ++ ++ F R LH+ N++ SLN+SL + L +
Sbjct: 267 LRNSQDLEELLAGNNELEYLAQDEFQACGRLDVLHLASNHIRSLNSSLLPMVKLTIANFS 326
Query: 92 NNRLK--SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG--SLYANNNRITSLDGL 147
N ++ S+E +L L L+ L + N++ L + +L +L +NN+I SLDG
Sbjct: 327 FNDMEEFSME-ELHGLRLLKRLDLSHNRISRLLPSTKGVQELVLFALRLDNNQIVSLDGA 385
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYL 206
L GL L++ ++ N++ + +F + L+ + + NQ+ + + L L L L
Sbjct: 386 LAGLGNLRILDLSANRLEHLLLGDFDGMQRLEILDMTGNQLVELKPLETTMLPNLKILKL 445
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+ N +T+ L D GL L +L+ N+I +
Sbjct: 446 AFNNITK-LERDFNGLPVLCQANLTNNQITTISSE 479
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLN--WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
+++L + N ++ L S +G+ +L L L+NN++ SL+G L L L++L + N+LE
Sbjct: 344 LKRLDLSHNRISRLLPSTKGVQELVLFALRLDNNQIVSLDGALAGLGNLRILDLSANRLE 403
Query: 120 ALP-SDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L D +L L N++ L L L L++ + FN IT + RD F L
Sbjct: 404 HLLLGDFDGMQRLEILDMTGNQLVELKPLETTMLPNLKILKLAFNNITKLERD-FNGLPV 462
Query: 178 LDSISLQNNQITSMNSSL 195
L +L NNQIT+++S L
Sbjct: 463 LCQANLTNNQITTISSEL 480
>gi|195163017|ref|XP_002022350.1| GL26536 [Drosophila persimilis]
gi|194104311|gb|EDW26354.1| GL26536 [Drosophila persimilis]
Length = 832
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 126/213 (59%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
DDLKG + L+L +NNIT + AFP ++ LH+G N + SLN SL L L LF+N
Sbjct: 176 DDLKGIQVVTNLILPSNNITRLDRGAFPQSLLILHLGRNQIESLNGSLHDLHVLQSLFIN 235
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + L+G+L S+L+LL+ N+LE LP+++ L +++ + NR+ S D +LR
Sbjct: 236 ANNISDLDGELPDGSRLRLLMAHNNRLERLPANMAGMRYLQTIHVHFNRLRSFDRVLRNS 295
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L+ N++ + +DEFQ LD + L +N I S+NSSL + KL S N +
Sbjct: 296 QDLEELLAGNNELEYLAQDEFQACGRLDVLHLASNHIRSLNSSLLPMVKLTIANFSFNDM 355
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
EF ++++ GL+ L+ +DLS+N+I++ +G
Sbjct: 356 EEFSMEELHGLRLLKRLDLSHNRISRLLPSTKG 388
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
L+ + L LL NN + ++ ++ F R LH+ N++ SLN+SL + L +
Sbjct: 292 LRNSQDLEELLAGNNELEYLAQDEFQACGRLDVLHLASNHIRSLNSSLLPMVKLTIANFS 351
Query: 92 NNRLK--SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG--SLYANNNRITSLDGL 147
N ++ S+E +L L L+ L + N++ L + +L +L +NN+I SLDG
Sbjct: 352 FNDMEEFSME-ELHGLRLLKRLDLSHNRISRLLPSTKGVQELVLFALRLDNNQIVSLDGA 410
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYL 206
L GL L++ ++ N++ + +F + L+ + + NQ+ + + L L L L
Sbjct: 411 LAGLGNLRILDLSANRLEHLLLGDFDGMQRLEILDMTGNQLVELKPLETTMLPNLKILKL 470
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+ N +T+ L D GL L +L+ N+I +
Sbjct: 471 AFNNITK-LERDFNGLPVLCQANLTNNQITTISSE 504
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLN--WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
+++L + N ++ L S +G+ +L L L+NN++ SL+G L L L++L + N+LE
Sbjct: 369 LKRLDLSHNRISRLLPSTKGVQELVLFALRLDNNQIVSLDGALAGLGNLRILDLSANRLE 428
Query: 120 ALP-SDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L D +L L N++ L L L L++ + FN IT + RD F L
Sbjct: 429 HLLLGDFDGMQRLEILDMTGNQLVELKPLETTMLPNLKILKLAFNNITKLERD-FNGLPV 487
Query: 178 LDSISLQNNQITSMNSSL 195
L +L NNQIT+++S L
Sbjct: 488 LCQANLTNNQITTISSEL 505
>gi|195017902|ref|XP_001984684.1| GH14894 [Drosophila grimshawi]
gi|193898166|gb|EDV97032.1| GH14894 [Drosophila grimshawi]
Length = 808
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 122/207 (58%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
DDLKG + L+L +NNIT + AFP ++ LH+G N + SLN SL LT+L LF+N
Sbjct: 151 DDLKGIQMVTNLILPSNNITRLDRGAFPLSLLILHLGRNQIESLNGSLHDLTELQSLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + L+GQL SKL LL+ N+LE LPS++ L +++ + NR+ S D +LR
Sbjct: 211 ANNISDLDGQLPDKSKLILLMAHNNRLERLPSNLVTMDNLETVHLHFNRLRSFDRVLRNA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L + N++ + +DEF ++++ L N I S+N SL + KL S N +
Sbjct: 271 PNLTELLANNNELEYLAQDEFLASWQMETLHLACNHIGSLNYSLHPMLKLKIGNFSFNDI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF ++++ GL+ L+ VDLSYN+I +
Sbjct: 331 EEFSMEELHGLRSLKMVDLSYNRIKRL 357
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDL---NWL 88
L+ P L LL NN + ++ ++ F + + LH+ N++ SLN SL + L N+
Sbjct: 267 LRNAPNLTELLANNNELEYLAQDEFLASWQMETLHLACNHIGSLNYSLHPMLKLKIGNFS 326
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG--SLYANNNRITSLDG 146
F N+ S+E +L L L+++ + N+++ L + S+L L ++N+I +LD
Sbjct: 327 F-NDIEEFSME-ELHGLRSLKMVDLSYNRIKRLLPGHKSMSELPLIDLRLDHNQIITLDS 384
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLY 205
L GL+ L++ ++ N+I + + ++ L+ + L NQ+ + + L L L
Sbjct: 385 ALAGLSYLRILSLSKNRIESILPGDLTGMNRLEILDLTANQLVDLKQLETTLLPNLRVLK 444
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+++N +++ L D GL L V+L+ N+I +
Sbjct: 445 VAYNNISK-LERDFYGLPVLCQVNLTNNQITTISSE 479
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNW--LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
+++ + + +N + L + +++L L L++N++ +L+ L LS L++L + +N++
Sbjct: 343 SLKMVDLSYNRIKRLLPGHKSMSELPLIDLRLDHNQIITLDSALAGLSYLRILSLSKNRI 402
Query: 119 EA-LPSDIQLFSQLGSLYANNNRITSLDGLLRGL-TKLQVFNMDFNQITMVRRDEFQNLH 176
E+ LP D+ ++L L N++ L L L L+V + +N I+ + RD F L
Sbjct: 403 ESILPGDLTGMNRLEILDLTANQLVDLKQLETTLLPNLRVLKVAYNNISKLERD-FYGLP 461
Query: 177 NLDSISLQNNQITSMNSSL 195
L ++L NNQIT+++S L
Sbjct: 462 VLCQVNLTNNQITTISSEL 480
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 64 KLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEAL 121
KL + +NNL SL RGL+++ +L + +N L + L + LQ L I + + A+
Sbjct: 89 KLRMQWNNLRSLPELPFRGLSNVTYLSVGDNELDEVPKHVLNHMPLLQTLDIARCNIRAV 148
Query: 122 PSD-IQLFSQLGSLYANNNRITSLDGLLRGLTKLQ--VFNMDFNQITMVRRDEFQNLHNL 178
D ++ + +L +N IT LD RG L + ++ NQI + +L L
Sbjct: 149 QQDDLKGIQMVTNLILPSNNITRLD---RGAFPLSLLILHLGRNQIESLN-GSLHDLTEL 204
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
S+ + N I+ ++ L +KL L ++HN E L ++ + L TV L +N++ F
Sbjct: 205 QSLFINANNISDLDGQLPDKSKL-ILLMAHNNRLERLPSNLVTMDNLETVHLHFNRLRSF 263
>gi|157115103|ref|XP_001658113.1| leucine-rich transmembrane protein [Aedes aegypti]
gi|108877017|gb|EAT41242.1| AAEL007087-PA [Aedes aegypti]
Length = 630
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 123/205 (60%), Gaps = 7/205 (3%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
L++ +N + I ++ P T+ LH G NNLTSLN +LR L +L LF+N+N L SL+ +L
Sbjct: 69 LIVASNLLQRIDTDSMPRTLISLHYGHNNLTSLNGTLRHLDELKLLFINDNHLTSLDDEL 128
Query: 103 GTLSKLQLLVIEQN-QLEALPSDIQLFSQLGSLYANNNRITSLDGLLR---GLTKLQVFN 158
S + + QN +++ LP +I+ L SL+ N+N + S DGLL LTKL +
Sbjct: 129 PLASPNLITIFAQNNKIDHLPVEIKYLKNLDSLFINSNELQSFDGLLSRSAHLTKLVAVD 188
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
N+IT +RRDEF L+ + L N++TS+N SL + L S N+L EF L +
Sbjct: 189 ---NKITHLRRDEFSEAERLEDLQLSENKLTSLNGSLLNMKGLIMANFSFNRLNEFSLQE 245
Query: 219 IRGLKRLRTVDLSYNKINKFGTRNE 243
++GL++LR +DLS+N+I K R E
Sbjct: 246 VQGLRKLRILDLSHNRIEKLIGRME 270
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 40 LITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNNSL---RGLTDLNWLF--LNN 92
L L+ V+N ITH+ + F R L + N LTSLN SL +GL N+ F LN
Sbjct: 181 LTKLVAVDNKITHLRRDEFSEAERLEDLQLSENKLTSLNGSLLNMKGLIMANFSFNRLNE 240
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS----LYANNNRITSLDGLL 148
L+ ++G L KL++L + N++E L ++ GS L +N I SLDG L
Sbjct: 241 FSLQEVQG----LRKLRILDLSHNRIEKLIGRMENLVDSGSIIYELRLQHNLIKSLDGTL 296
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLS 207
GL L++ N+ N++ M+ D+ + NL+ + L N++ ++ S + L L + S
Sbjct: 297 MGLNNLKILNVAHNRLEMITPDDLIGMENLEHLDLSFNKLKTLEELSKTFLPSLQSVNAS 356
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N LT + D GL L T DLS N I
Sbjct: 357 YNLLTT-MDKDFHGLPVLCTADLSNNMI 383
>gi|110757535|ref|XP_392419.3| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Apis mellifera]
Length = 635
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 122/223 (54%), Gaps = 13/223 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ SDD K P L LLL N I+ + + PP ++ LHVG N+L SLN +LR L L WL
Sbjct: 184 IDSDDFKYNPTLQHLLLAGNAISEMVPGSLPPLVKHLHVGRNHLQSLNRTLRDLNQLEWL 243
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N N L SL+G+L + L++L N+L LP + + +L SLY +N+I SLDG
Sbjct: 244 LINANELSSLDGELPSSGHNLKMLYAVDNKLTHLPVEFRYLHRLESLYLQHNKIRSLDGT 303
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS------------L 195
L+ +L+ + N + + ++F L+ + L +N + S++S+ L
Sbjct: 304 LQKARRLKFLELSHNDLQELTEEDFIEAEMLEDLELGHNSLKSLDSAGDNGDGNGGNSVL 363
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L L L+HN+L EF +RGL+ LR +DLS N+I +
Sbjct: 364 YPLRSLKCLNLTHNELREFSFASLRGLRELRMLDLSNNRIARL 406
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
SLRGL +L L L+NNR+ L L +E+ E +IQ +
Sbjct: 386 SLRGLRELRMLDLSNNRIARLHRGRTPSENL----VEEEGDETAGGNIQ------DMRLQ 435
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NS 193
+N + SLDG L G+ +LQ N+ N + T+ +RD + L L + L +N++T++ ++
Sbjct: 436 HNELRSLDGSLFLGMKELQRLNLSHNALGPTIGQRD-LRGLDGLKVLDLSHNELTTLEDT 494
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S + L L L SHN+L D RG L D+S N+I
Sbjct: 495 SETWLPSLEELNASHNRLVTLSERDFRGFPVLCWADVSANRI 536
>gi|170045937|ref|XP_001850546.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
gi|167868779|gb|EDS32162.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
Length = 686
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 120/205 (58%), Gaps = 7/205 (3%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
L++ +N + I + P T+ LH G NNLT+LN +LR L +L LF N+N L SL+ +L
Sbjct: 122 LIVASNLLQRIDADTMPRTLISLHYGHNNLTTLNGTLRHLDELKLLFANDNHLTSLDDEL 181
Query: 103 GTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL---RGLTKLQVFN 158
S L + + NQ++ LP +I+ L SL+ + NR+ S DGLL LTKL F+
Sbjct: 182 PLASPNLMTIFAQNNQIDHLPIEIKYLKNLDSLFLHGNRLKSFDGLLARSSQLTKLVAFD 241
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
N+I +RRDEF L+ + L N++T++N SL + L S+N L EF L +
Sbjct: 242 ---NEINHLRRDEFIEAERLEDLQLAENKLTNLNGSLQNMKGLIIANFSYNLLNEFSLQE 298
Query: 219 IRGLKRLRTVDLSYNKINKFGTRNE 243
+ GL++LR +DLS+NKI K R E
Sbjct: 299 VTGLRKLRILDLSHNKIEKLTGRME 323
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 40 LITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNNSL---RGLTDLNWLF--LNN 92
L L+ +N I H+ + F R L + N LT+LN SL +GL N+ + LN
Sbjct: 234 LTKLVAFDNEINHLRRDEFIEAERLEDLQLAENKLTNLNGSLQNMKGLIIANFSYNLLNE 293
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS----LYANNNRITSLDGLL 148
L+ + G L KL++L + N++E L ++ GS L +N + SLDG L
Sbjct: 294 FSLQEVTG----LRKLRILDLSHNKIEKLTGRMENLVDSGSIIYELRLQHNLLKSLDGTL 349
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLS 207
GL L++ N+ N + + D+ + NL+ + L N++ ++ S + L L + S
Sbjct: 350 MGLNNLKILNVAHNMLETITPDDLIGMENLEHLDLSFNKLNTLEELSKTFLPSLQSVNAS 409
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N LT + D GL L T DLS N I
Sbjct: 410 YNLLTT-MDKDFHGLPVLCTADLSNNMI 436
>gi|194751195|ref|XP_001957912.1| GF10651 [Drosophila ananassae]
gi|190625194|gb|EDV40718.1| GF10651 [Drosophila ananassae]
Length = 817
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 126/210 (60%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ DD +G A+ L+L +NNIT + + +FP ++ LH+G N L +LN +L L L L
Sbjct: 148 VQQDDFRGIQAVTNLILPSNNITRLDKGSFPRSLLILHLGRNRLETLNGTLLDLDKLQSL 207
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
F+N N + +L+ +L SKL+LL+ N+LE LP+++ +L +++ +NR+ SLD +
Sbjct: 208 FINANNISTLDNELPDGSKLRLLMAHNNRLERLPANMAEMDELETVHIQSNRLRSLDRVF 267
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
R LQ F + N++ + +DEF + + +D++ + N I S+NSSL + KL S
Sbjct: 268 RNAVNLQEFQAENNELEFLAQDEFASCYQIDNLLMSCNHIRSLNSSLLPILKLKRANFSF 327
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N + EF + +I GL+ L+ + LS N+I +
Sbjct: 328 NDMEEFSMGEIHGLRSLKFLVLSNNRIQRL 357
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 47 NNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLG 103
NN + + ++ F I L + N++ SLN+SL + L + N ++ G++
Sbjct: 280 NNELEFLAQDEFASCYQIDNLLMSCNHIRSLNSSLLPILKLKRANFSFNDMEEFSMGEIH 339
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQ--LGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L L+ LV+ N+++ L D + + L LY + NRI +L+G L GL L++ N+
Sbjct: 340 GLRSLKFLVLSNNRIQRLLPDPRGIQKMLLVELYLDQNRIEALNGALAGLGNLRILNLAS 399
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N++ ++ +F L L+ + L NQ+ + + L L L ++ N +T+ L D +
Sbjct: 400 NRLEHLQEGDFYGLQRLEILDLTGNQLVDLKPMETTILPNLKILSVAFNNITK-LEQDFK 458
Query: 221 GLKRLRTVDLSYNKINKFGT 240
GL L +L+ N+I+ +
Sbjct: 459 GLPVLCQANLTNNQISSISS 478
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 107/232 (46%), Gaps = 22/232 (9%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRK-----LHVGFNNLTSLNNSLRGLTDLNW 87
++ G +L L+L NN I + + P I+K L++ N + +LN +L GL +L
Sbjct: 337 EIHGLRSLKFLVLSNNRIQRLLPD--PRGIQKMLLVELYLDQNRIEALNGALAGLGNLRI 394
Query: 88 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD 145
L L +NRL+ L EG L +L++L + NQL L P + + L L N IT L+
Sbjct: 395 LNLASNRLEHLQEGDFYGLQRLEILDLTGNQLVDLKPMETTILPNLKILSVAFNNITKLE 454
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNL----HNLD---SISLQNNQITSMNSSLSGL 198
+GL L N+ NQI+ + D N HN+ I+L +N I + L+ L
Sbjct: 455 QDFKGLPVLCQANLTNNQISSISSDLVTNTRCRNHNVPGKLEINLDDNPIMC-DVRLNEL 513
Query: 199 TKLAYLYLS----HNQLTEFLLDDIRGLKRLRTVDLSYNKIN-KFGTRNEGK 245
+L + + +Q E + L L VDL N K G R + K
Sbjct: 514 CRLMAVQEARIRGRSQCFENDQEVCTVLPMLYKVDLPIVVTNLKIGGREDAK 565
>gi|380020072|ref|XP_003693921.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor-binding
protein complex acid labile subunit-like [Apis florea]
Length = 635
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 121/223 (54%), Gaps = 13/223 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ SDD K P L LLL N I+ + + PP ++ LHVG N+L SLN +LR L L WL
Sbjct: 184 IDSDDFKYNPTLQHLLLAGNAISEMVPGSLPPLVKHLHVGRNHLQSLNRTLRDLNQLEWL 243
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N N L SL+G+L + L++L N+L LP + + +L SLY +N+I SLDG
Sbjct: 244 LINANELSSLDGELPSSGHNLKMLYAVDNKLTHLPVEFRYLHRLESLYLQHNKIRSLDGT 303
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS------------L 195
L+ +L+ + N + + ++F L+ + L +N + S++S+ L
Sbjct: 304 LQKARRLKFLELSHNDLQELTEEDFIEAEMLEDLELGHNSLKSLDSAGDNGDGNGGNSVL 363
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L L+HN+L EF +RGL+ LR +DLS N+I +
Sbjct: 364 YPLRSLKCXNLTHNELREFSFASLRGLRELRMLDLSNNRIARL 406
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
SLRGL +L L L+NNR+ L L +E+ E +IQ +
Sbjct: 386 SLRGLRELRMLDLSNNRIARLHRGRTPSENL----VEEEGDETAGGNIQ------DMRLQ 435
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NS 193
+N + SLDG L G+ +LQ N+ N + T+ +RD + L L + L +N++T++ ++
Sbjct: 436 HNELRSLDGSLFLGMKELQRLNLSHNALGPTIGQRD-LRGLDGLKVLDLSHNELTTLEDT 494
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S + L L L SHN+L D RG L D+S N+I
Sbjct: 495 SETWLPSLEELNASHNRLVTLSERDFRGFPVLCWADVSANRI 536
>gi|158295080|ref|XP_316002.4| AGAP005962-PA [Anopheles gambiae str. PEST]
gi|157015864|gb|EAA11826.4| AGAP005962-PA [Anopheles gambiae str. PEST]
Length = 830
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
L++ NN + I +A P TI L + N L SLN S+R L +L LF+N N L +L+G+L
Sbjct: 165 LIMGNNQLQRIDTDALPKTIHSLQLSVNQLRSLNGSIRHLDELKLLFINENNLTTLDGEL 224
Query: 103 GTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
S L ++ + NQLE LP +++ L +L NR+ SLDGLL T L
Sbjct: 225 PLGSPNLMMITAQNNQLEQLPGELRFLKNLDNLCVPGNRLRSLDGLLARATHLTKLLAQD 284
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQI+ +RRDEF L+ ++L N + ++N SL L S N+L EF L ++ G
Sbjct: 285 NQISELRRDEFLEAERLEELNLAGNWLVNLNGSLLNCKGLINANFSENRLQEFSLQEVAG 344
Query: 222 LKRLRTVDLSYNKINKFGTRNE 243
L++LR +DLS+N+I R E
Sbjct: 345 LRKLRLLDLSHNRIEVLSGRME 366
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 40 LITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNSL---RGLTDLNWLFLNNNR 94
L LL +N I+ + + F + +L++ N L +LN SL +GL + N+ + NR
Sbjct: 277 LTKLLAQDNQISELRRDEFLEAERLEELNLAGNWLVNLNGSLLNCKGLINANF---SENR 333
Query: 95 LKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLG----SLYANNNRITSLDGLLR 149
L+ Q + L KL+LL + N++E L ++ G L NNNR+ SLDG L
Sbjct: 334 LQEFSLQEVAGLRKLRLLDLSHNRIEVLSGRMENMIDSGLIISELRLNNNRLRSLDGALM 393
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GL L++ N+ N++ + ++ + L+ + L NQ+ ++ S + L L L S+
Sbjct: 394 GLNNLRILNVAHNELQTITPNDLIGMEELERLDLSFNQLKTLEELSKTFLPSLESLNASY 453
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
NQLT + D GL L DLS N I +
Sbjct: 454 NQLTT-MHKDFHGLPILCVADLSKNMIRELSV 484
>gi|270003207|gb|EEZ99654.1| hypothetical protein TcasGA2_TC002411 [Tribolium castaneum]
Length = 584
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 2/208 (0%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LT K P + L+L N+I+ + +++FP +++LH+G NNL +LN +L L+DL WL
Sbjct: 224 LTGSSFKDLP-VQCLVLAGNSISQMDQDSFPKEVQRLHIGRNNLKTLNKTLTNLSDLIWL 282
Query: 89 FLNNNRLKSLEGQLG-TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
F N+N L LEG+L KL+++ N++E LP ++ + L SL+ N I SLDG
Sbjct: 283 FANSNELTDLEGELPLDAKKLKMIHFSNNKIEKLPQQLKTLTYLESLFFQYNHIQSLDGT 342
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
L KL ++ N I + +++F L+S+ L +N+ITS+N+SL L L +L ++
Sbjct: 343 LGKARKLVRVVLEHNNIKTLTKEDFTENEILESLILGHNEITSLNNSLLNLKNLNFLNMT 402
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N L+EF +I GL+ L+++DLSYN+I
Sbjct: 403 FNHLSEFSFQEIVGLQELKSIDLSYNRI 430
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 69 FNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
FN+L+ + + GL +L + L+ NR+K+L G L +E N
Sbjct: 403 FNHLSEFSFQEIVGLQELKSIDLSYNRIKTLIGPATNL-------VEWN----------- 444
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
+L L ++N I SLDG L GL +L N+ FN++ + D+ L L + + +N
Sbjct: 445 -IKLTELKLDHNEIESLDGALSGLPELLRLNLSFNKLRRISPDDLIGLDQLRLLDVSHNY 503
Query: 188 ITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
+T++ +S + L +L L SHN LT L D GL L DLS N+I G
Sbjct: 504 LTTLEETSKTFLPRLEELRASHNYLT-ILERDFHGLPVLCHADLSNNQIVALG 555
>gi|91080065|ref|XP_966986.1| PREDICTED: similar to AGAP005962-PA [Tribolium castaneum]
Length = 509
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 2/208 (0%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LT K P + L+L N+I+ + +++FP +++LH+G NNL +LN +L L+DL WL
Sbjct: 149 LTGSSFKDLP-VQCLVLAGNSISQMDQDSFPKEVQRLHIGRNNLKTLNKTLTNLSDLIWL 207
Query: 89 FLNNNRLKSLEGQLG-TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
F N+N L LEG+L KL+++ N++E LP ++ + L SL+ N I SLDG
Sbjct: 208 FANSNELTDLEGELPLDAKKLKMIHFSNNKIEKLPQQLKTLTYLESLFFQYNHIQSLDGT 267
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
L KL ++ N I + +++F L+S+ L +N+ITS+N+SL L L +L ++
Sbjct: 268 LGKARKLVRVVLEHNNIKTLTKEDFTENEILESLILGHNEITSLNNSLLNLKNLNFLNMT 327
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N L+EF +I GL+ L+++DLSYN+I
Sbjct: 328 FNHLSEFSFQEIVGLQELKSIDLSYNRI 355
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 69 FNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
FN+L+ + + GL +L + L+ NR+K+L G L +E N
Sbjct: 328 FNHLSEFSFQEIVGLQELKSIDLSYNRIKTLIGPATNL-------VEWN----------- 369
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
+L L ++N I SLDG L GL +L N+ FN++ + D+ L L + + +N
Sbjct: 370 -IKLTELKLDHNEIESLDGALSGLPELLRLNLSFNKLRRISPDDLIGLDQLRLLDVSHNY 428
Query: 188 ITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
+T++ +S + L +L L SHN LT L D GL L DLS N+I G
Sbjct: 429 LTTLEETSKTFLPRLEELRASHNYLT-ILERDFHGLPVLCHADLSNNQIVALG 480
>gi|195428206|ref|XP_002062165.1| GK17391 [Drosophila willistoni]
gi|194158250|gb|EDW73151.1| GK17391 [Drosophila willistoni]
Length = 827
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 127/215 (59%), Gaps = 1/215 (0%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
+D KG + L+L +NNI + +FP +++ LH+G N + SLN SL L L LF+N
Sbjct: 151 EDFKGIQMVTNLILPSNNINRLDRGSFPLSLQILHLGRNQIESLNGSLHELDKLQSLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + +L+G+L S L+LL+ N+LE LP+++ L +++ + NR+ S DG+L+
Sbjct: 211 ANNISNLDGELPDGSILKLLMAHNNRLERLPANMAKMMNLETIHLHFNRLRSFDGVLKHA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L + N++ + +DEFQ ++++ L N I S+NSSL + KL S N++
Sbjct: 271 KYLNELYANNNELEYLAQDEFQMCELMETLHLDCNHIRSLNSSLHSMGKLKIANFSFNEI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINK-FGTRNEGK 245
EF ++++ GL+ L+ +DLS N+I + +RN K
Sbjct: 331 EEFSMEELHGLRSLKLLDLSNNRIQRLIPSRNSIK 365
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 47 NNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK--SLEGQL 102
NN + ++ ++ F + LH+ N++ SLN+SL + L + N ++ S+E +L
Sbjct: 280 NNELEYLAQDEFQMCELMETLHLDCNHIRSLNSSLHSMGKLKIANFSFNEIEEFSME-EL 338
Query: 103 GTLSKLQLLVIEQNQLEAL-PSDIQLFS-QLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
L L+LL + N+++ L PS + L L+ +NN+I +LD L GL L++ N+
Sbjct: 339 HGLRSLKLLDLSNNRIQRLIPSRNSIKDLPLRDLHLDNNQIITLDSALAGLGNLRLLNLP 398
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDI 219
N++ + +F+ +H L+ + + NQ+T + + L L L ++ N +T+ L D
Sbjct: 399 HNKLKYILPSDFEGMHILELLDMTGNQLTELKPLENTILPSLRILKVAFNNITK-LERDF 457
Query: 220 RGLKRLRTVDLSYNKI 235
GL L V+L+ N+I
Sbjct: 458 HGLPVLCQVNLTNNQI 473
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 33 DLKGTPALITLLLVNNNITHIH--ENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D +G L L + N +T + EN P++R L V FNN+T L GL L + L
Sbjct: 409 DFEGMHILELLDMTGNQLTELKPLENTILPSLRILKVAFNNITKLERDFHGLPVLCQVNL 468
Query: 91 NNNRLKSLEGQL 102
NN++ S+ +L
Sbjct: 469 TNNQIMSISSEL 480
>gi|332022789|gb|EGI63062.1| Leucine-rich repeats and immunoglobulin-like domains protein 3
[Acromyrmex echinatior]
Length = 618
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
P L L + N I+ + + PP ++ LHVG N L SLN++LR L L WL +N+N L S
Sbjct: 172 PTLQHLAMAGNAISEMIPGSLPPLVKHLHVGRNRLNSLNHTLRDLNQLEWLLINSNELTS 231
Query: 98 LEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
L+G+L + L++L N+L LP++ + +L +L+ N+I +LDG L+ +L+
Sbjct: 232 LDGELPSSGHNLKMLYAADNKLTHLPAEFRYLHRLETLFLQQNKIRNLDGTLQKARRLKF 291
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM---------NSSLSGLTKLAYLYLS 207
+ +N++ + D+F L+ + L +N + S+ +S+L L L L L+
Sbjct: 292 LELSYNELQELNADDFLEAEMLEDLELGHNSLKSLGGADGDGNGSSALYPLRSLKCLNLT 351
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
HN+L EF L +RGL+ L+ +DLS N+I +
Sbjct: 352 HNELREFSLASLRGLRELKLLDLSNNRIARL 382
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
SLRGL +L L L+NNR+ L G S L+ E ++ S + L
Sbjct: 362 SLRGLRELKLLDLSNNRIARL--HRGRPSSENLVEEEGEEIAG--------STIQDLRLQ 411
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NS 193
+N + SLDG L G+ +LQ N+ N + T+ RD + L L + + +NQ+T++ ++
Sbjct: 412 HNELRSLDGSLFLGMKELQRLNLSHNALGPTIGPRD-LRGLDGLRVLDISHNQLTTLEDT 470
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S + L L L SHN+L D RG L D+S N+I
Sbjct: 471 SETWLPSLEELNASHNRLVMLSGRDFRGFPVLCWADVSMNQI 512
>gi|312376719|gb|EFR23726.1| hypothetical protein AND_12362 [Anopheles darlingi]
Length = 939
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
L+L +N ++ + +A P TI+ L + N+L SLN S+R L +L LF+N N L +L G+L
Sbjct: 292 LILGSNQLSRLDTDALPKTIQSLQLSVNSLRSLNGSVRHLDELKLLFVNENNLTTLAGEL 351
Query: 103 GTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
S L ++ + N+LEALP +I+ L L NNR+ SLDGLL T L +
Sbjct: 352 PRGSPNLIMISVHHNRLEALPVEIRYLKNLDHLSIQNNRLRSLDGLLARATHLTKLIAND 411
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N I + RDEF + ++ ++L N++T +N SL L S N+L EF L ++ G
Sbjct: 412 NLIEELHRDEFLEVERMEELNLAGNRLTHLNGSLLHCKGLINANFSENRLKEFSLQEVAG 471
Query: 222 LKRLRTVDLSYNKINKFGTRNE 243
L++LR +DLS+N+I R E
Sbjct: 472 LRKLRLLDLSHNRIEVLAGRME 493
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 41 ITLLLVNNN-ITHIHENAFPPTIR--KLHVGFNNLTSLNNSL---RGLTDLNWLFLNNNR 94
+T L+ N+N I +H + F R +L++ N LT LN SL +GL + N+ + NR
Sbjct: 404 LTKLIANDNLIEELHRDEFLEVERMEELNLAGNRLTHLNGSLLHCKGLINANF---SENR 460
Query: 95 LKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLG----SLYANNNRITSLDGLLR 149
LK Q + L KL+LL + N++E L ++ G L NNNR+ SLDG L
Sbjct: 461 LKEFSLQEVAGLRKLRLLDLSHNRIEVLAGRMENMIDSGLIISELRLNNNRLRSLDGALM 520
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GL L++ N+ NQ+ + D+ + L+ + L NQ+ ++ S + L L L S+
Sbjct: 521 GLNNLRILNVAHNQLQTITPDDLIGMEELERLDLSFNQLKTLEELSKTFLPSLELLNASY 580
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQLT + D GL L DLS N I +
Sbjct: 581 NQLTT-MHKDFHGLPILCVADLSKNMIREL 609
>gi|24660200|ref|NP_729265.1| larval translucida, isoform A [Drosophila melanogaster]
gi|442630793|ref|NP_001261524.1| larval translucida, isoform B [Drosophila melanogaster]
gi|23093981|gb|AAF50544.2| larval translucida, isoform A [Drosophila melanogaster]
gi|206564679|gb|ACI12876.1| FI03225p [Drosophila melanogaster]
gi|440215429|gb|AGB94219.1| larval translucida, isoform B [Drosophila melanogaster]
Length = 817
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 120/207 (57%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
+D +G + L+LV+N IT + +FP ++ LH+G N L SLN SL L +L LF+N
Sbjct: 151 EDFRGIQRVTNLILVSNIITRLDRGSFPKSLLILHLGRNQLESLNGSLHDLHNLESLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + SL+ +L +L+LL+ N+LE LP+++ L +++ + N++ S D +LR
Sbjct: 211 ANNITSLDDELPDGGQLRLLMAHNNRLERLPANMAGMHSLETVHIHCNQLRSFDRVLRNA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L D N++ + +DEF + ++++ + N I S+NSSL + KL S N +
Sbjct: 271 VNLSEVMADNNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF + ++ GL+ L+T+ LS N+I +
Sbjct: 331 EEFSMAELHGLRSLKTLQLSSNRIQRL 357
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 47 NNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLG 103
NN + ++ ++ F + L +G N++ SLN+SL + L + N ++ +L
Sbjct: 280 NNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDIEEFSMAELH 339
Query: 104 TLSKLQLLVIEQNQLEAL---PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
L L+ L + N+++ L P +Q L +L +NNRI SL+G L GL L++ N+
Sbjct: 340 GLRSLKTLQLSSNRIQRLLPDPRGVQEL-MLVNLDLDNNRIDSLNGALAGLGNLRILNLA 398
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDI 219
N++ ++ +F + LD + L NQ+ + ++ L L L +++N +T+ L D
Sbjct: 399 GNRLEHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITK-LEQDF 457
Query: 220 RGLKRLRTVDLSYNKINKFGTR 241
+GL L +L+ N+I+ +
Sbjct: 458 KGLPVLCQANLTNNQISTISSE 479
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQL 127
N + SLN +L GL +L L L NRL+ L+ G + +L +L + NQL L P ++ L
Sbjct: 377 NRIDSLNGALAGLGNLRILNLAGNRLEHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTL 436
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
L L N IT L+ +GL L N+ NQI+ + + N
Sbjct: 437 LPSLKILKVAYNNITKLEQDFKGLPVLCQANLTNNQISTISSELVTN 483
>gi|195492601|ref|XP_002094062.1| GE21627 [Drosophila yakuba]
gi|194180163|gb|EDW93774.1| GE21627 [Drosophila yakuba]
Length = 829
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 120/207 (57%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
+D +G + L+LV+N IT + +FP ++ LH+G N L SLN SL L +L LF+N
Sbjct: 151 EDFRGIQRVTNLILVSNIITRLDRGSFPKSLLILHLGRNQLESLNGSLHDLHNLESLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + SL+ +L +L+LL+ N+LE LP+++ L +++ + N++ S D +LR
Sbjct: 211 ANNITSLDDELPDGGQLRLLMAHNNRLERLPANMAGMHSLETVHIHCNQLRSFDRVLRNA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L D N++ + +DEF + ++++ + N I S+NSSL + KL S N +
Sbjct: 271 VNLSEVMADNNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF + ++ GL+ L+T+ LS N+I +
Sbjct: 331 EEFSMAELHGLRSLKTLQLSSNRIQRL 357
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 47 NNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLG 103
NN + ++ ++ F + L +G N++ SLN+SL + L + N ++ +L
Sbjct: 280 NNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDIEEFSMAELH 339
Query: 104 TLSKLQLLVIEQNQLEAL---PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
L L+ L + N+++ L P +Q L +L +NNRI +L+G L GL L++ N+
Sbjct: 340 GLRSLKTLQLSSNRIQRLLPDPRGVQEL-MLVNLDLDNNRIDALNGALAGLGNLRILNLA 398
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDI 219
N++ ++ +F + LD + L NQ+ + ++ L L L +++N +T+ L D
Sbjct: 399 GNRLEHLQVGDFDGMLRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITK-LEQDF 457
Query: 220 RGLKRLRTVDLSYNKINKFGTR 241
+GL L +L+ N+I+ +
Sbjct: 458 KGLPVLCQANLTNNQISTISSE 479
>gi|311334779|gb|ADP89556.1| RT10325p [Drosophila melanogaster]
Length = 805
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 120/207 (57%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
+D +G + L+LV+N IT + +FP ++ LH+G N L SLN SL L +L LF+N
Sbjct: 139 EDFRGIQRVTNLILVSNIITRLDRGSFPKSLLILHLGRNQLESLNGSLHDLHNLESLFIN 198
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + SL+ +L +L+LL+ N+LE LP+++ L +++ + N++ S D +LR
Sbjct: 199 ANNITSLDDELPDGGQLRLLMAHNNRLERLPANMAGMHSLETVHIHCNQLRSFDRVLRNA 258
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L D N++ + +DEF + ++++ + N I S+NSSL + KL S N +
Sbjct: 259 VNLSEVMADNNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDI 318
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF + ++ GL+ L+T+ LS N+I +
Sbjct: 319 EEFSMAELHGLRSLKTLQLSSNRIQRL 345
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 47 NNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLG 103
NN + ++ ++ F + L +G N++ SLN+SL + L + N ++ +L
Sbjct: 268 NNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDIEEFSMAELH 327
Query: 104 TLSKLQLLVIEQNQLEAL---PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
L L+ L + N+++ L P +Q L +L +NNRI SL+G L GL L++ N+
Sbjct: 328 GLRSLKTLQLSSNRIQRLLPDPRGVQEL-MLVNLDLDNNRIDSLNGALAGLGNLRILNLA 386
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDI 219
N++ ++ +F + LD + L NQ+ + ++ L L L +++N +T+ L D
Sbjct: 387 GNRLEHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITK-LEQDF 445
Query: 220 RGLKRLRTVDLSYNKINKFGTR 241
+GL L +L+ N+I+ +
Sbjct: 446 KGLPVLCQANLTNNQISTISSE 467
>gi|194865438|ref|XP_001971429.1| GG14437 [Drosophila erecta]
gi|190653212|gb|EDV50455.1| GG14437 [Drosophila erecta]
Length = 825
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 119/207 (57%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
+D +G + L+LV+N IT + +FP ++ LH+G N L SLN SL L +L LF+N
Sbjct: 151 EDFRGIQRVTNLILVSNIITRLDRGSFPKSLLILHLGRNQLESLNGSLHDLHNLESLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + SL+ +L +L+LL+ N+LE LP+++ L +++ + N++ S D +LR
Sbjct: 211 ANNITSLDDELPDGGQLRLLMAHNNRLERLPANMAGMHSLETVHIHCNQLRSFDRVLRNA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L D N++ + +DEF ++++ + N I S+NSSL + KL S N +
Sbjct: 271 VNLSEVMADNNELEYLAQDEFATCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF + ++ GL+ L+T+ LS N+I +
Sbjct: 331 EEFSMAELHGLRSLKTLQLSSNRIQRL 357
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 47 NNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLG 103
NN + ++ ++ F + L +G N++ SLN+SL + L + N ++ +L
Sbjct: 280 NNELEYLAQDEFATCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDIEEFSMAELH 339
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLG--SLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L L+ L + N+++ L D + +L +L +NNRI SL+G L GL L++ N+
Sbjct: 340 GLRSLKTLQLSSNRIQRLLPDPRGVQELMLVNLDLDNNRIDSLNGALAGLGNLRILNLAG 399
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N++ ++ +F + LD + L NQ+ + ++ L L L +++N +T+ L D +
Sbjct: 400 NRLKHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITK-LEQDFK 458
Query: 221 GLKRLRTVDLSYNKINKFGTR 241
GL L +L+ N+I +
Sbjct: 459 GLPVLCQANLTNNQITSISSE 479
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNW--LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
+++ L + N + L RG+ +L L L+NNR+ SL G L L L++L + N+L
Sbjct: 343 SLKTLQLSSNRIQRLLPDPRGVQELMLVNLDLDNNRIDSLNGALAGLGNLRILNLAGNRL 402
Query: 119 EALP-SDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+ L D +L L N++ L L + L L++ + +N IT + +D F+ L
Sbjct: 403 KHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITKLEQD-FKGLP 461
Query: 177 NLDSISLQNNQITSMNSSL 195
L +L NNQITS++S L
Sbjct: 462 VLCQANLTNNQITSISSEL 480
>gi|195588506|ref|XP_002083999.1| GD14023 [Drosophila simulans]
gi|194196008|gb|EDX09584.1| GD14023 [Drosophila simulans]
Length = 827
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 120/207 (57%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
+D +G + L+LV+N IT + +FP ++ LH+G N L SLN SL L +L LF+N
Sbjct: 151 EDFRGIQRVTNLILVSNIITRLDRGSFPKSLLILHLGRNQLESLNGSLHDLHNLESLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + +L+ +L +L+LL+ N+LE LP+++ L +++ + N++ S D +LR
Sbjct: 211 ANNITTLDDELPDGGQLRLLMAHNNRLERLPANMAGMHSLETVHIHCNQLRSFDRVLRNA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L D N++ + +DEF + ++++ + N I S+NSSL + KL S N +
Sbjct: 271 VNLSEVMADNNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF + ++ GL+ L+T+ LS N+I +
Sbjct: 331 EEFSMAELHGLRSLKTLQLSSNRIQRL 357
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 47 NNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLG 103
NN + ++ ++ F + L +G N++ SLN+SL + L + N ++ +L
Sbjct: 280 NNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDIEEFSMAELH 339
Query: 104 TLSKLQLLVIEQNQLEAL---PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
L L+ L + N+++ L P +Q L +L +NNRI SL+G L GL L++ N+
Sbjct: 340 GLRSLKTLQLSSNRIQRLLPDPRGVQEL-MLVNLDLDNNRIDSLNGALAGLGNLRILNLA 398
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDI 219
N++ ++ +F + LD + L NQ+ + ++ L L L +++N +T+ L D
Sbjct: 399 GNRLEHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITK-LEQDF 457
Query: 220 RGLKRLRTVDLSYNKINKFGTR 241
+GL L +L+ N+I+ +
Sbjct: 458 KGLPVLCQANLTNNQISTISSE 479
>gi|195338213|ref|XP_002035720.1| GM14853 [Drosophila sechellia]
gi|194128813|gb|EDW50856.1| GM14853 [Drosophila sechellia]
Length = 826
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 120/207 (57%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
+D +G + L+LV+N IT + +FP ++ LH+G N L SLN SL L +L LF+N
Sbjct: 151 EDFRGIQRVTNLILVSNIITRLDRGSFPKSLLILHLGRNQLESLNGSLHDLHNLESLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + +L+ +L +L+LL+ N+LE LP+++ L +++ + N++ S D +LR
Sbjct: 211 ANNITTLDDELPDGGQLRLLMAHNNRLERLPANMAGMHSLETVHIHCNQLRSFDRVLRNA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L D N++ + +DEF + ++++ + N I S+NSSL + KL S N +
Sbjct: 271 VNLSEVMADNNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF + ++ GL+ L+T+ LS N+I +
Sbjct: 331 EEFSMAELHGLRSLKTLQLSSNRIQRL 357
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 47 NNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLG 103
NN + ++ ++ F + L +G N++ SLN+SL + L + N ++ +L
Sbjct: 280 NNELEYLAQDEFASCSKVETLQMGCNHIKSLNSSLLPILKLKNANFSFNDIEEFSMAELH 339
Query: 104 TLSKLQLLVIEQNQLEAL---PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
L L+ L + N+++ L P +Q L +L +NNRI SL+G L GL L++ N+
Sbjct: 340 GLRSLKTLQLSSNRIQRLLPDPRGVQEL-MLVNLDLDNNRIDSLNGALAGLGNLRILNLA 398
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDI 219
N++ ++ +F + LD + L NQ+ + ++ L L L +++N +T+ L D
Sbjct: 399 GNRLEHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITK-LEQDF 457
Query: 220 RGLKRLRTVDLSYNKINKFGTR 241
+GL L +L+ N+I+ +
Sbjct: 458 KGLPVLCQANLTNNQISAISSE 479
>gi|28317039|gb|AAO39539.1| RE09158p [Drosophila melanogaster]
Length = 817
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 119/207 (57%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
+D +G + L+LV+N IT + +FP ++ LH+G N L SLN SL L +L LF+N
Sbjct: 151 EDFRGIQRVTNLILVSNIITRLDRGSFPKSLLILHLGRNQLESLNGSLHDLHNLESLFIN 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + SL+ +L +L+LL+ N+LE LP+++ L +++ + N++ S D +LR
Sbjct: 211 ANNITSLDDELPDGGQLRLLMAHNNRLERLPANMAGMHSLETVHIHCNQLRSFDRVLRNA 270
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L D N++ + +DEF + ++++ + N I S+N SL + KL S N +
Sbjct: 271 VNLSEVMADNNELEYLAQDEFASCSKVETLQMGCNHIKSLNYSLLPILKLKNANFSFNDI 330
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
EF + ++ GL+ L+T+ LS N+I +
Sbjct: 331 EEFSMAELHGLRSLKTLQLSSNRIQRL 357
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 9/202 (4%)
Query: 47 NNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLG 103
NN + ++ ++ F + L +G N++ SLN SL + L + N ++ +L
Sbjct: 280 NNELEYLAQDEFASCSKVETLQMGCNHIKSLNYSLLPILKLKNANFSFNDIEEFSMAELH 339
Query: 104 TLSKLQLLVIEQNQLEAL---PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
L L+ L + N+++ L P +Q L +L +NNRI SL+G L GL L++ N+
Sbjct: 340 GLRSLKTLQLSSNRIQRLLPDPRGVQEL-MLVNLDLDNNRIDSLNGALAGLGNLRILNLA 398
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDI 219
N++ ++ +F + LD + L NQ+ + ++ L L L +++N +T+ L D
Sbjct: 399 GNRLEHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITK-LEQDF 457
Query: 220 RGLKRLRTVDLSYNKINKFGTR 241
+GL L +L+ N+I+ +
Sbjct: 458 KGLPVLCQANLTNNQISTISSE 479
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQL 127
N + SLN +L GL +L L L NRL+ L+ G + +L +L + NQL L P ++ L
Sbjct: 377 NRIDSLNGALAGLGNLRILNLAGNRLEHLQVGDFDGMIRLDILDLTGNQLAELKPLEMTL 436
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
L L N IT L+ +GL L N+ NQI+ + + N
Sbjct: 437 LPSLKILKVAYNNITKLEQDFKGLPVLCQANLTNNQISTISSELVTN 483
>gi|350414424|ref|XP_003490313.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Bombus impatiens]
Length = 637
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ SDD K P L LLL N I+ + + PP ++ LHVG N L SLN +LR L L WL
Sbjct: 185 IDSDDFKYNPTLQHLLLAGNAISEMVPGSLPPLVKHLHVGRNQLQSLNRTLRDLNQLEWL 244
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N N L SL+G+L + L++L N+L LP++ + +L SLY +N+I SLDG
Sbjct: 245 LINANELTSLDGELPSSGHNLKMLYAVDNKLTHLPAEFRYLHRLESLYLQHNKIRSLDGT 304
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS------------- 194
L+ +L+ + +N + + ++F L+ + L +N + S+ S+
Sbjct: 305 LQKARRLKFLELSYNDLQELTEEDFLEAEMLEDLELGHNSLKSLGSAGNGNGDGNGGNSV 364
Query: 195 LSGLTKLAYLYLSHNQLTEF 214
L L L L L+HN+L EF
Sbjct: 365 LYPLRSLKCLNLTHNELREF 384
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NS 193
+N + SLDG L G+ +LQ N+ +N + T+ +RD + L L + L +N++T++ ++
Sbjct: 438 HNELRSLDGSLFLGMKELQKLNLSYNALGPTIGQRD-LRGLDGLKVLDLSHNELTTLEDT 496
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S + L L L SHN+L D RG L D+S N+I
Sbjct: 497 SETWLPSLEELNASHNRLVTLSERDFRGFPVLCWADVSANRI 538
>gi|307214961|gb|EFN89806.1| Leucine-rich repeats and immunoglobulin-like domains protein 3
[Harpegnathos saltator]
Length = 646
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 110/198 (55%), Gaps = 10/198 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ SDD K P L L + N I + + PP ++ LHVG N+L SLN +LR L L WL
Sbjct: 195 IDSDDFKYNPMLQHLSMAGNAIIEMAPGSLPPLVKHLHVGRNHLNSLNRTLRDLNQLEWL 254
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
F+N+N L SL+G+L + L++L N+L LP++ + +L SL+ +N+I +LDG
Sbjct: 255 FINSNELTSLDGELPSSGHNLKMLYAADNKLTHLPAEFRYLHRLESLFLQHNKIRNLDGT 314
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM---------NSSLSGL 198
L+ L+ + +N++ + D+F L+ + L +N + S+ +S+L L
Sbjct: 315 LQKARGLKFLELSYNELQELNADDFIEAEMLEDLELGHNSLKSLGGADGDGNGSSALYPL 374
Query: 199 TKLAYLYLSHNQLTEFLL 216
L L L+HN+L EF L
Sbjct: 375 KSLKCLNLTHNELREFSL 392
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NS 193
+N + SLDG L G+ +LQ N+ N + T+ RD + L L + + +NQ+T++ ++
Sbjct: 444 HNELRSLDGSLFLGMKELQRLNLSHNALGPTIGPRDLY-GLDGLRVLDISHNQLTTLEDT 502
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S + L L L SHN+L D RG L D+S N+I
Sbjct: 503 SETWLPSLEELNASHNRLITLSGRDFRGFPVLCLADVSMNQI 544
>gi|340715225|ref|XP_003396118.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Bombus terrestris]
Length = 635
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ SDD K P L LLL N I+ + + PP ++ LHVG N L SLN +LR L L WL
Sbjct: 183 IDSDDFKYNPTLQHLLLAGNAISEMVPGSLPPLVKHLHVGRNQLQSLNRTLRDLNQLEWL 242
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N N L SL+G+L + L++L N+L LP++ + +L SLY +N+I SLDG
Sbjct: 243 LINANELTSLDGELPSSGHNLKMLYAVDNKLTHLPAEFRYLHRLESLYLQHNKIRSLDGT 302
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS------------- 194
L+ +L+ + +N + + ++F L+ + L +N + S+ S+
Sbjct: 303 LQKARRLKFLELSYNDLQELTEEDFLEAEMLEDLELGHNSLKSLGSAGNGNGDGNGGNSV 362
Query: 195 LSGLTKLAYLYLSHNQLTEF 214
L L L L L+HN+L EF
Sbjct: 363 LYPLRSLKCLNLTHNELREF 382
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NS 193
+N + SLDG L G+ +LQ N+ +N + T+ +RD + L L + L +N++T++ ++
Sbjct: 436 HNELRSLDGSLFLGMKELQKLNLSYNALGPTIGQRD-LRGLDGLKVLDLSHNELTTLEDT 494
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S + L L L SHN+L D RG L D+S N+I
Sbjct: 495 SETWLPSLEELNASHNRLVTLSERDFRGFPVLCWADVSANRI 536
>gi|307173508|gb|EFN64418.1| Leucine-rich repeats and immunoglobulin-like domains protein 3
[Camponotus floridanus]
Length = 644
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 127/220 (57%), Gaps = 10/220 (4%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ SDD K P L L + N I+ + + PP ++ LHVG N+L SLN++LR L L WL
Sbjct: 187 IDSDDFKYNPTLQHLAMAGNAISEMTPGSLPPLVKHLHVGRNHLNSLNHTLRDLNQLEWL 246
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N+N L SL+G+L + L++L N+L LP++ + +L +L+ +N+I +LDG
Sbjct: 247 LINSNELTSLDGELPSSGHNLKMLYAADNRLTHLPAEFRYLHRLETLFLQHNKIRNLDGT 306
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM---------NSSLSGL 198
L+ +L+ + +N++ + ++F L+ + L +N + S+ +S+L L
Sbjct: 307 LQKARRLKFLELSYNELQELNENDFIEAEMLEDLELGHNSLKSLGGADGDGNGSSALYPL 366
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L L+HN+L EF L +RGL+ LR +DLS N+I +
Sbjct: 367 RSLKCLNLTHNELREFSLASLRGLRELRLLDLSSNRIARL 406
>gi|383860801|ref|XP_003705877.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Megachile rotundata]
Length = 637
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ SDD K P L L + N I+ + + PP ++ LHVG N+L SLN +LR L L WL
Sbjct: 183 IDSDDFKYNPTLQHLSMAGNAISEMVPGSLPPLVKHLHVGRNHLQSLNRTLRDLNQLEWL 242
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N N L SL+G+L + L++L N+L LP++ + +L SL+ +N+I SLDG
Sbjct: 243 LINANELTSLDGELPSSGHNLKMLYAVDNKLTHLPAEFRYLHRLESLFLQHNKIRSLDGT 302
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-------------NSS 194
L+ +L+ + +N + + ++F L+ + L +N + S+ NS
Sbjct: 303 LQKARRLKFLELSYNDLQELTEEDFIEAEMLEDLELGHNSLKSLGGAVGANSDGNGGNSV 362
Query: 195 LSGLTKLAYLYLSHNQLTEF 214
L L L L L+HN+L EF
Sbjct: 363 LYPLRSLKCLNLTHNELREF 382
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NS 193
+N + SLDG L G+ +LQ N+ N + T+ RD + L L + L +N++T++ ++
Sbjct: 436 HNELRSLDGSLFLGMKELQRLNLSHNALGPTIGPRD-LRGLDGLKVLDLSHNELTTLEDT 494
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S + L L L SHN+L D RG L D+S N+I
Sbjct: 495 SETWLPSLEELNASHNRLVTLSERDFRGFPVLCWADVSANRI 536
>gi|427737941|ref|YP_007057485.1| hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
gi|427372982|gb|AFY56938.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
Length = 868
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 8/186 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
A PP I + LH+ +N L+SL LT+L +L+L N+L +L ++G L KLQ
Sbjct: 30 ALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLPAEIGQLRKLQC 89
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +NQL LP +I + L SLY N N++++L L KLQ F + NQ++ + +
Sbjct: 90 LYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYLRRNQLSSL-PE 148
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL S+ L NQ++++ + L+ L YL+LS+NQL+ L +I L L+ + L
Sbjct: 149 EIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSS-LPPEIGQLSNLQYLHL 207
Query: 231 SYNKIN 236
SYN+++
Sbjct: 208 SYNQLS 213
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Query: 62 IRKLHVGF---NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
+RKL + N L+ L + LT+L L+LN N+L +L + G L KLQ + +NQL
Sbjct: 84 LRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYLRRNQL 143
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+LP +I + L SLY N N++++L + L+ LQ ++ +NQ++ + E L NL
Sbjct: 144 SSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSSLP-PEIGQLSNL 202
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L NQ++S+ + LT L LYL +NQL+
Sbjct: 203 QYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLS 236
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 2/192 (1%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
+ + + E A +L + N LT+L + LT+L +L L+ N+L SL + G
Sbjct: 1 MTEEELLQVIEQAAAEGWTELDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQ 60
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
L+ LQ L + +NQL LP++I +L LY N+++ L + LT LQ ++ NQ+
Sbjct: 61 LTNLQFLYLLENQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQL 120
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
+ + EF L L L+ NQ++S+ + LT L LYL+ NQL+ L +I L
Sbjct: 121 STL-PAEFGQLRKLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLST-LPPEIGQLSN 178
Query: 225 LRTVDLSYNKIN 236
L+ + LSYN+++
Sbjct: 179 LQYLHLSYNQLS 190
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 62 IRKLHVGF---NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
+RKL + N L+SL + LT+L L+LN N+L +L ++G LS LQ L + NQL
Sbjct: 130 LRKLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQL 189
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-N 177
+LP +I S L L+ + N+++SL + LT LQ + +NQ++ + E LH +
Sbjct: 190 SSLPPEIGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSL-PPEIGRLHSH 248
Query: 178 LDSISLQNNQITSMNSSLSG 197
L ++L N + S+ + + G
Sbjct: 249 LTELTLDGNPLESLPAEIRG 268
>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
Length = 376
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 114/192 (59%), Gaps = 3/192 (1%)
Query: 48 NNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N +T + E A +R+L++ +N LT + ++ LT L WL+LNNN+L+ + + +L+
Sbjct: 145 NQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIASLT 204
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
+LQ L + N+L A+P I SQL SL +NN++T L + LT+LQ + NQ+T
Sbjct: 205 QLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGNQLTE 264
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ + +L L + L N++T++ +++ LT+L L LS N+LT + + I L L+
Sbjct: 265 L-PEAIASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDNELT-AVPEAIASLTHLQ 322
Query: 227 TVDLSYNKINKF 238
+DLSYN++ +
Sbjct: 323 GLDLSYNQLTQV 334
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT + ++ L+ L L L+NN+L + + +LS+LQ L + N+L +
Sbjct: 45 LQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEAIASLSQLQTLNLIYNKLTEV 104
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I +QL LY +NN++T + + L++LQ N++FNQ+T V + +L L +
Sbjct: 105 PEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEV-PEAIASLSQLRRL 163
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+L NQ+T + +++ LT+L +LYL++NQL + + + I L +L+ + LS N++
Sbjct: 164 NLSYNQLTEVPETIASLTQLEWLYLNNNQLRK-VPEAIASLTQLQRLSLSDNELTAV 219
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 113/200 (56%), Gaps = 3/200 (1%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L+ N +T + E T ++KL++ N LT + ++ L+ L L LN N+L +
Sbjct: 91 LQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEV 150
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ +LS+L+ L + NQL +P I +QL LY NNN++ + + LT+LQ +
Sbjct: 151 PEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLS 210
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N++T V + +L L S++L NNQ+T + +++ LT+L LYL NQLTE L +
Sbjct: 211 LSDNELTAV-PEAIASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGNQLTE-LPEA 268
Query: 219 IRGLKRLRTVDLSYNKINKF 238
I L +L+ + L N++
Sbjct: 269 IASLTQLQELYLVGNELTAV 288
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 45 LVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L +N +T + E A +R L++ N LT L ++ LT L L+L N+L L +
Sbjct: 211 LSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGNQLTELPEAIA 270
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
+L++LQ L + N+L A+P I +QL L ++N +T++ + LT LQ ++ +NQ
Sbjct: 271 SLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQ 330
Query: 164 ITMVRRDEFQNLHNLDSISLQNN 186
+T V + +L L + L +N
Sbjct: 331 LTQV-PEAIASLSQLQELYLDDN 352
>gi|241997822|ref|XP_002433554.1| toll, putative [Ixodes scapularis]
gi|215495313|gb|EEC04954.1| toll, putative [Ixodes scapularis]
Length = 460
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 2/214 (0%)
Query: 24 TGSH--PLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRG 81
+G+H L S G L L+L +N I I F P + ++ + N + SLN S+R
Sbjct: 147 SGNHIGKLNSSSFPGLRNLKFLVLSDNEIEFIEAGVFNPNLERVTLSRNKIPSLNGSVRH 206
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L L WLF + N ++SLEG+L LS L+LL ++ N+L + + L +L NN I
Sbjct: 207 LASLEWLFASTNAIESLEGELEGLSSLKLLNLDGNKLTNIAGVFKDLRSLQTLSLGNNWI 266
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
+ L LT L N+ N ++ + F L L ++ L N +T + +L+ L L
Sbjct: 267 EDVGDALAPLTHLWHLNLSRNHLSKIEERNFAGLTQLQTLDLSGNFLTEIGQALNHLKHL 326
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS N L+ LD+I+ LK L+ +DLS N+I
Sbjct: 327 VRLNLSRNSLSSVRLDEIKWLKDLKELDLSRNQI 360
>gi|322800516|gb|EFZ21520.1| hypothetical protein SINV_15626 [Solenopsis invicta]
Length = 539
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 110/198 (55%), Gaps = 14/198 (7%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLN---WL 88
DD K P L L + N I+ + + PP ++ LHVG N L +LN++LR L DLN WL
Sbjct: 65 DDFKYNPMLQHLAMAGNAISEMTPGSLPPLVKHLHVGRNRLNNLNHTLR-LADLNQLEWL 123
Query: 89 FLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N+N L SL+G+L + L++L N+L LP++ + +L +L+ N+I +LDG
Sbjct: 124 LINSNELTSLDGELPSSGHNLKMLYAVDNKLTHLPAEFRYLHRLENLFLQQNKIRNLDGT 183
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM---------NSSLSGL 198
L+ +L+ + +N++ + D+F L+ + L +N I S+ +S+L L
Sbjct: 184 LQKARRLKFLELSYNELQELNADDFIEAEMLEDLELGHNSIKSLGGVDSDGNWSSALYPL 243
Query: 199 TKLAYLYLSHNQLTEFLL 216
L L L+HN+L EF L
Sbjct: 244 RSLKCLNLTHNELREFSL 261
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQNNQITSM-NS 193
+N + SLDG L G+ +LQ N+ N + T+ RD + L L + + +NQ+T++ ++
Sbjct: 313 HNELRSLDGSLFLGMKELQRLNLSHNALGPTIGPRD-LRGLDGLRVLDVSHNQLTTLEDT 371
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S + L L L SHN+L D RG L D+S N+I
Sbjct: 372 SETWLPSLEELNASHNRLVTLSGRDFRGFPVLCGADVSMNQI 413
>gi|320170955|gb|EFW47854.1| hypothetical protein CAOG_05792 [Capsaspora owczarzaki ATCC 30864]
Length = 727
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 6/205 (2%)
Query: 39 ALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
AL +L L N IT I NAF + LH+ N +TS++N+ GLT L L L NN +
Sbjct: 141 ALRSLFLYANLITSISANAFTSLTALTYLHLYGNQITSISNAFTGLTALTELHLYNNHIT 200
Query: 97 SLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG-LLRGLTK 153
S+ T L+ L L + NQ+ ++P+D + L LY N+N+ITS+ GLT
Sbjct: 201 SISANAFTDLTALTELSLISNQITSIPADTFTGLTALTYLYLNSNQITSIPADTFTGLTA 260
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLT 212
L +++ N IT + F +L L +S +N ITS+++ + +GLT L YL+ S N +T
Sbjct: 261 LTYLSLNSNSITSIAATAFTDLTALTYLSFNSNSITSISANAFAGLTALTYLFFSSNLIT 320
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINK 237
+ GL L + L N+I
Sbjct: 321 SISANAFAGLTALTYLSLGSNQITS 345
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNW 87
S+ G AL L L NN+IT I NAF + +L + N +TS+ ++ GLT L +
Sbjct: 180 SNAFTGLTALTELHLYNNHITSISANAFTDLTALTELSLISNQITSIPADTFTGLTALTY 239
Query: 88 LFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITS 143
L+LN+N++ S+ T L+ L L + N + ++ + F+ L +L N+N ITS
Sbjct: 240 LYLNSNQITSIPADTFTGLTALTYLSLNSNSITSIAA--TAFTDLTALTYLSFNSNSITS 297
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GLT L N IT + + F L L +SL +NQITS+ + + +G+T L
Sbjct: 298 ISANAFAGLTALTYLFFSSNLITSISANAFAGLTALTYLSLGSNQITSIPAGTFTGVTAL 357
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
YL L NQ+T D GL L + L N+I
Sbjct: 358 TYLSLDSNQITSIPADTFTGLTALTYLYLGTNQITS 393
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 35/238 (14%)
Query: 35 KGTPALITLLLVNNN-ITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFL 90
G P T L +N+N IT I NAF + L + +N +TS+ ++ GLT L +L L
Sbjct: 40 SGIPTDTTKLYINSNPITSIPTNAFTGLTALTFLSLDYNLITSIPADAFTGLTALTYLSL 99
Query: 91 NNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL-----YAN------- 137
N + S+ G ++ L L + NQ+ ++P+ F+ L +L YAN
Sbjct: 100 YANPITSIPAGTFTGVTALTYLSLSSNQITSIPAGA--FTDLTALRSLFLYANLITSISA 157
Query: 138 ---------------NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
N+ITS+ GLT L ++ N IT + + F +L L +S
Sbjct: 158 NAFTSLTALTYLHLYGNQITSISNAFTGLTALTELHLYNNHITSISANAFTDLTALTELS 217
Query: 183 LQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
L +NQITS+ + + +GLT L YLYL+ NQ+T D GL L + L+ N I
Sbjct: 218 LISNQITSIPADTFTGLTALTYLYLNSNQITSIPADTFTGLTALTYLSLNSNSITSIA 275
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRL 95
AL L L++N IT I + F + L++ N +TS+ ++ GLT L +L LN+N +
Sbjct: 212 ALTELSLISNQITSIPADTFTGLTALTYLYLNSNQITSIPADTFTGLTALTYLSLNSNSI 271
Query: 96 KSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG-LLRGLT 152
S+ T L+ L L N + ++ ++ + L L+ ++N ITS+ GLT
Sbjct: 272 TSIAATAFTDLTALTYLSFNSNSITSISANAFAGLTALTYLFFSSNLITSISANAFAGLT 331
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQL 211
L ++ NQIT + F + L +SL +NQITS+ + + +GLT L YLYL NQ+
Sbjct: 332 ALTYLSLGSNQITSIPAGTFTGVTALTYLSLDSNQITSIPADTFTGLTALTYLYLGTNQI 391
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINK 237
T L L + L N I
Sbjct: 392 TSLPSSSFTNLTALTYLVLQSNPITT 417
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 27/200 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNN--LTSLN-NSLRGLTDL 85
+ +D G AL L L +N+IT I AF ++ FN+ +TS++ N+ GLT L
Sbjct: 250 IPADTFTGLTALTYLSLNSNSITSIAATAFTDLTALTYLSFNSNSITSISANAFAGLTAL 309
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
+LF ++N + S+ L+ L L + NQ+ ++P+
Sbjct: 310 TYLFFSSNLITSISANAFAGLTALTYLSLGSNQITSIPA--------------------- 348
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAY 203
G G+T L ++D NQIT + D F L L + L NQITS+ +SS + LT L Y
Sbjct: 349 -GTFTGVTALTYLSLDSNQITSIPADTFTGLTALTYLYLGTNQITSLPSSSFTNLTALTY 407
Query: 204 LYLSHNQLTEFLLDDIRGLK 223
L L N +T +GL
Sbjct: 408 LVLQSNPITTLPPGLFKGLP 427
>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 528
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L +G N LT+L + L L L LN+N+L +L ++G L KLQ L + NQL L
Sbjct: 196 LQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTL 255
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T+L + L KLQ ++ NQ+T V +E NL NL +
Sbjct: 256 PKEIGNLQNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSV-PEEIGNLQNLQKL 314
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL +NQ+T + + L KL L L NQLT L +I L++L+T+DL NK+
Sbjct: 315 SLHSNQLTIIPKEIGNLQKLEELDLGQNQLT-ILPKEIGNLQKLQTLDLGNNKL 367
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N LT+L + L +L L L N+L +L ++G L LQ L + QNQL L
Sbjct: 81 LKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTL 140
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY +N+ +L + L KLQ ++ NQ+T + + E + L L +
Sbjct: 141 PKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPK-EIEKLQKLQEL 199
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L KL L L+HNQLT L +I L++L+T++L++N++
Sbjct: 200 DLGINQLTTLPKEIGNLQKLQTLNLNHNQLTN-LPKEIGKLQKLQTLNLNHNQL 252
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+L + L L L+L +N+ +L +G L KLQ L + NQL L
Sbjct: 127 LQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTL 186
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L L N++T+L + L KLQ N++ NQ+T + + E L L ++
Sbjct: 187 PKEIEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPK-EIGKLQKLQTL 245
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +NQ+T++ + L L LYL NQLT L +I L++L+ + LS N++
Sbjct: 246 NLNHNQLTTLPKEIGNLQNLQQLYLYSNQLT-TLPKEIEKLQKLQELHLSDNQL 298
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L L L L++N+L S+ ++G L LQ L + NQL +
Sbjct: 265 LQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTII 324
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L N++T L + L KLQ ++ N++T + + E L N ++
Sbjct: 325 PKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPK-EIGKLQNPQTL 383
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L KL +LYL+HN L + +I L+ L+ + L+ N++
Sbjct: 384 YLNRNQLTTLPKEIGNLQKLKWLYLAHNNLA-TIPQEIGSLQSLQVLTLNSNRL 436
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N LT+L + L + L+LN N+L +L ++G L KL+ L + N L +
Sbjct: 357 LQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATI 416
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+NR+T+L + L LQ N+D NQ+T + + E L NL+S+
Sbjct: 417 PQEIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPK-EIGKLRNLESL 475
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSH 208
L N +TS + L L +L L +
Sbjct: 476 DLSENPLTSFPEEIGKLQHLKWLRLEN 502
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N LTS+ + L +L L L++N+L + ++G L KL+ L + QNQL L
Sbjct: 288 LQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEIGNLQKLEELDLGQNQLTIL 347
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I +L +L NN++T+L + L Q ++ NQ+T + ++
Sbjct: 348 PKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLY 407
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E +L +L ++L +N++T++ + L L L L NQLT L +I
Sbjct: 408 LAHNNLATIPQEIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLT-TLPKEI 466
Query: 220 RGLKRLRTVDLSYNKINKF 238
L+ L ++DLS N + F
Sbjct: 467 GKLRNLESLDLSENPLTSF 485
>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 380
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L N+L +L ++G L KLQ L + +NQL L
Sbjct: 97 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E + L NL ++
Sbjct: 157 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPK-EIEQLKNLQTL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NN++T+ + L L LYL NQLT L +I+ LK L+ +DLSYN++
Sbjct: 216 YLGNNRLTTFPKEIEQLKNLQLLYLYDNQLT-VLPQEIKQLKNLQLLDLSYNQL 268
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 2/185 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 48 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 107
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SLY N++T+L + L KLQ + NQ+T + + E L NL
Sbjct: 108 KTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNL 166
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
S++L NQI ++ + L KL L L +NQLT L +I LK L+T+ L N++ F
Sbjct: 167 KSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLT-TLPKEIEQLKNLQTLYLGNNRLTTF 225
Query: 239 GTRNE 243
E
Sbjct: 226 PKEIE 230
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L+L NNRL + ++
Sbjct: 170 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEI 229
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
L LQLL + NQL LP +I+ L L + N++ +L + L LQ N+ +N
Sbjct: 230 EQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYN 289
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T++ + E + L NL ++ L NQ+T + + L L L+L++NQLT L +I L
Sbjct: 290 QLTVLPK-EIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLT-TLPKEIGQL 347
Query: 223 KRLRTVDLSYNKI 235
K L+ + L+ N++
Sbjct: 348 KNLQELYLNNNQL 360
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++ L LQ L + N+L
Sbjct: 166 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTF 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L LY +N++T L ++ L LQ+ ++ +NQ+ + + E + L NL +
Sbjct: 226 PKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPK-EIEQLKNLQEL 284
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T + + L L LYL +NQLT L +I L+ L+ + L+ N++
Sbjct: 285 NLGYNQLTVLPKEIEQLKNLQTLYLGYNQLT-VLPKEIGQLQNLKVLFLNNNQL 337
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + +N L +L + L +L L L N+L L ++ L LQ L + NQL LP +
Sbjct: 261 LDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTVLPKE 320
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L+ NNN++T+L + L LQ ++ NQ+++ ++ Q L IS +
Sbjct: 321 IGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIQKLIPKCQISFE 380
>gi|418755279|ref|ZP_13311486.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964290|gb|EKO32180.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 267
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 103/176 (58%), Gaps = 2/176 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P ++ LH+ N LT+L N + L L +L L NNRL +L ++GTL LQ L +E N+L
Sbjct: 3 PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP +I +L LY NN++ +L + L +L+ ++ NQ+ ++ + E L NL
Sbjct: 63 TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQ-EIGKLQNLK 121
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L+NN++ S + L KL +LYL++NQL L +I L+ L+ +DLS N++
Sbjct: 122 ELILENNRLESFPKEIGTLQKLQHLYLANNQLA-TLPKEIGQLQNLKDLDLSDNQL 176
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L +L + L L WL L NN+L+ L ++G L L+ L++E N+LE+ P +
Sbjct: 77 LYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNRLESFPKE 136
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +L LY NN++ +L + L L+ ++ NQ+ + +E L L+ +SL+
Sbjct: 137 IGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLP-EEIGTLQRLEWLSLK 195
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
NNQ+ ++ + L KL L LS N T F +I GLK L+T+ L
Sbjct: 196 NNQLATLPKEIGKLEKLEDLNLSGNPFTTF-PQEIVGLKHLKTLVLQ 241
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L S + L L L+L NN+L +L ++G L L+ L + NQL L
Sbjct: 120 LKELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTL 179
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L NN++ +L + L KL+ N+ N T + E L +L ++
Sbjct: 180 PEEIGTLQRLEWLSLKNNQLATLPKEIGKLEKLEDLNLSGNPFTTFPQ-EIVGLKHLKTL 238
Query: 182 SLQNNQITSMNSSLSGLTKL 201
LQN I ++ S + KL
Sbjct: 239 VLQN--IPALLSEKEKIRKL 256
>gi|320167107|gb|EFW44006.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 624
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 9/190 (4%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLV 112
+ P +L + N++TS++ N+ GLT L +L L N++ + G L+ L L
Sbjct: 53 PSGIPTHTTQLTLDLNSITSISANAFTGLTALTYLSLQYNQITGIPAGTFTGLTALTALF 112
Query: 113 IEQNQLEALPSDIQLFSQLGSLYA---NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVR 168
NQ+ ++P+D F+ L SL NN++TS+ G GLT L ++ NQIT +
Sbjct: 113 FAYNQITSIPADT--FTGLTSLTYLSLQNNQVTSISGTAFTGLTALTSLSLGPNQITSIP 170
Query: 169 RDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
D F L L ++SLQNNQITS++ ++ +GLT L LY NQ+T G+ L
Sbjct: 171 ADTFTGLTALTTLSLQNNQITSISGTAFTGLTALTCLYFGSNQITSIPAGAFTGMTSLTY 230
Query: 228 VDLSYNKINK 237
+ L NKI
Sbjct: 231 LSLYLNKITS 240
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 7/216 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
++++ G AL L L N IT I F + L +N +TS+ ++ GLT L
Sbjct: 73 ISANAFTGLTALTYLSLQYNQITGIPAGTFTGLTALTALFFAYNQITSIPADTFTGLTSL 132
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
+L L NN++ S+ G T L+ L L + NQ+ ++P+D + L +L NN+ITS
Sbjct: 133 TYLSLQNNQVTSISGTAFTGLTALTSLSLGPNQITSIPADTFTGLTALTTLSLQNNQITS 192
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ G GLT L NQIT + F + +L +SL N+ITS+++ + +GLT L
Sbjct: 193 ISGTAFTGLTALTCLYFGSNQITSIPAGAFTGMTSLTYLSLYLNKITSISANAFAGLTAL 252
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
YL L +N++T + GL L + L N+I
Sbjct: 253 TYLSLFNNKITSIPVGAFTGLTGLTDLYLDGNQITS 288
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 30/197 (15%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
+ +D G +L L L NN +T I AF + L +G N +TS+ ++ GLT L
Sbjct: 121 IPADTFTGLTSLTYLSLQNNQVTSISGTAFTGLTALTSLSLGPNQITSIPADTFTGLTAL 180
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD----------IQLF-SQLGS 133
L L NN++ S+ G T L+ L L NQ+ ++P+ + L+ +++ S
Sbjct: 181 TTLSLQNNQITSISGTAFTGLTALTCLYFGSNQITSIPAGAFTGMTSLTYLSLYLNKITS 240
Query: 134 LYAN--------------NNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ AN NN+ITS+ G GLT L +D NQIT + F NL L
Sbjct: 241 ISANAFAGLTALTYLSLFNNKITSIPVGAFTGLTGLTDLYLDGNQITSIPSSSFTNLTAL 300
Query: 179 DSISLQNNQITSMNSSL 195
+++LQNN IT++ L
Sbjct: 301 TALALQNNPITTLPPGL 317
>gi|418744901|ref|ZP_13301246.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794232|gb|EKR92142.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 267
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 104/176 (59%), Gaps = 2/176 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P ++ LH+ N LT+L N + L L +L L NNRL +L ++GTL LQ L +E N+L
Sbjct: 3 PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP +I +L LY NN++ +L + L +L+ ++ NQ+ ++ + E L NL
Sbjct: 63 TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQ-EIGKLQNLK 121
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L+NN++ ++ + L KL +LYL++NQL L +I L+ L+ +DLS N++
Sbjct: 122 ELILENNRLATLPKEIGTLRKLQHLYLANNQLA-TLPKEIGQLQNLKDLDLSDNQL 176
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L L WL+L NN+L +L ++G L +L+ L +E NQL L
Sbjct: 51 LQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRIL 110
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NNR+ +L + L KLQ + NQ+ + + E L NL +
Sbjct: 111 PQEIGKLQNLKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPK-EIGQLQNLKDL 169
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +NQ+ ++ + L +L +L L +NQL L +I L+ L+ +DLS N F
Sbjct: 170 DLSDNQLVTLPEEIGTLQRLEWLSLKNNQL-RTLPQEIGQLQNLKDLDLSGNPFTTF 225
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 25/162 (15%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L L + L +L L L NNRL +L ++GTL KLQ L + NQL LP +I
Sbjct: 105 NQLRILPQEIGKLQNLKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQ 164
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L ++N++ +L +E L L+ +SL+NNQ+
Sbjct: 165 NLKDLDLSDNQLVTLP------------------------EEIGTLQRLEWLSLKNNQLR 200
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
++ + L L L LS N T F +I GLK L+T+ L
Sbjct: 201 TLPQEIGQLQNLKDLDLSGNPFTTF-PQEIVGLKHLKTLVLQ 241
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L +L + L L L+L NN+L +L ++G L L+ L + NQL L
Sbjct: 120 LKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTL 179
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L NN++ +L + L L+ ++ N T + E L +L ++
Sbjct: 180 PEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQ-EIVGLKHLKTL 238
Query: 182 SLQNNQITSMNSSLSGLTKL 201
LQN I ++ S + KL
Sbjct: 239 VLQN--IPALLSEKEKIRKL 256
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 61 TIRKL---HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ 117
T+RKL ++ N L +L + L +L L L++N+L +L ++GTL +L+ L ++ NQ
Sbjct: 139 TLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQ 198
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L LP +I L L + N T+ + GL L+
Sbjct: 199 LRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLKTL 238
>gi|428163352|gb|EKX32427.1| hypothetical protein GUITHDRAFT_121393 [Guillardia theta CCMP2712]
Length = 1894
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFL 90
G +L TL L N +T + E F ++R L++ +N LTS+ ++ GL L +L+L
Sbjct: 254 FAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDGLASLQYLYL 313
Query: 91 NNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSL-D 145
++N+L S+ + L+ LQ L + N+L ++P + F+ L SL Y ++N++TS+ +
Sbjct: 314 SSNKLTSVPATVFAGLTSLQTLYLSGNELTSVPETV--FTGLASLQTLYLSSNKLTSVPE 371
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYL 204
+ GL LQ + N++T V F L +L + L +N++TS+ +++ +GLT L L
Sbjct: 372 TVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSIPATVFAGLTSLQSL 431
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
YLS N+LT GL L+T+ LS NK+
Sbjct: 432 YLSSNKLTSVPETVFDGLASLQTLYLSSNKLTS 464
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFL 90
G +L +L L +N +T + E F +++ L++ N LTS+ ++ GL L L+L
Sbjct: 422 FAGLTSLQSLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYL 481
Query: 91 NNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSL-D 145
+N L S+ L+ LQ L + N+L ++P + F+ L SL Y + N +TS+ +
Sbjct: 482 YDNELTSIPATGFNGLASLQTLYLSSNELTSIPETV--FAGLASLQTLYLSGNELTSVPE 539
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYL 204
+ GL LQ + N++T V F L +L ++ L +N++TS+ ++ +GL L YL
Sbjct: 540 TVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSIPETVFAGLASLQYL 599
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
YLS N+LT GL L+T+ LSYN++
Sbjct: 600 YLSSNKLTSVPETVFAGLASLQTLYLSYNELTS 632
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 110/197 (55%), Gaps = 11/197 (5%)
Query: 50 ITHIHENAFPPT--IRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSL-EGQLGTL 105
I I E F T + ++ + N LTS+ ++ GL L +L+L++N+L S+ E L
Sbjct: 78 IRRIDEGVFNNTWSLTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIPETVFAGL 137
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSLDG-LLRGLTKLQVFNMDF 161
+ +++L++ N+L ++P + F+ L SL Y +NN++TS+ + GL LQ +
Sbjct: 138 ASIRVLILSGNELTSVPETV--FAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSS 195
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIR 220
N++T V F L +L S+ L NN++TS+ ++ +GL L LYL N+LT
Sbjct: 196 NKLTSVPETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSIPATVFA 255
Query: 221 GLKRLRTVDLSYNKINK 237
GL L+T+ LSYNK+
Sbjct: 256 GLASLQTLYLSYNKLTS 272
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNN 92
G +L TL L +N +T I E F +++ L++ N LTS+ ++ GL L L+L+
Sbjct: 496 GLASLQTLYLSSNELTSIPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSG 555
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSL-DGL 147
N L S+ E L+ LQ L + N+L ++P + F+ L SL Y ++N++TS+ + +
Sbjct: 556 NELTSVPETVFAGLASLQTLYLSSNELTSIPETV--FAGLASLQYLYLSSNKLTSVPETV 613
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYL 206
GL LQ + +N++T V F L +L ++ L N++TS+ +++ +GL L L L
Sbjct: 614 FAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYLSYNKLTSVPATVFAGLASLRSLGL 673
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N+LT GL LR++ L +N++
Sbjct: 674 YDNKLTSVPATVFAGLASLRSLSLDFNELTSI 705
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFL 90
G +L L L +N +T I E F +IR L + N LTS+ ++ GL L +L+L
Sbjct: 110 FAGLASLQYLYLSSNKLTSIPETVFAGLASIRVLILSGNELTSVPETVFAGLASLQYLYL 169
Query: 91 NNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDI----------------------QL 127
+NN+L S+ + L+ LQ L + N+L ++P + +
Sbjct: 170 DNNKLTSVPATVFNGLASLQTLYLSSNKLTSVPETVFNGLASLRSLYLDNNELTSVPETV 229
Query: 128 FSQLGSL---YANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
F+ L SL Y +N +TS+ + GL LQ + +N++T V F L +L S+ L
Sbjct: 230 FAGLASLQTLYLYDNELTSIPATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYL 289
Query: 184 QNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
N++TS+ ++ GL L YLYLS N+LT GL L+T+ LS N++
Sbjct: 290 SYNELTSVPETVFDGLASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLSGNELTS 344
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 11/213 (5%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFL 90
G +L L L NN +T + F +++ L++ N LTS+ ++ GL L L+L
Sbjct: 158 FAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNKLTSVPETVFNGLASLRSLYL 217
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSL-D 145
+NN L S+ E L+ LQ L + N+L ++P+ + F+ L SL Y + N++TS+ +
Sbjct: 218 DNNELTSVPETVFAGLASLQTLYLYDNELTSIPATV--FAGLASLQTLYLSYNKLTSVPE 275
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYL 204
+ GL L+ + +N++T V F L +L + L +N++TS+ +++ +GLT L L
Sbjct: 276 TVFDGLASLRSLYLSYNELTSVPETVFDGLASLQYLYLSSNKLTSVPATVFAGLTSLQTL 335
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
YLS N+LT GL L+T+ LS NK+
Sbjct: 336 YLSGNELTSVPETVFTGLASLQTLYLSSNKLTS 368
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNN 92
G +L TL L +N +T + F +++ L++ N LTS+ + GL L L+L++
Sbjct: 448 GLASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDNELTSIPATGFNGLASLQTLYLSS 507
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSL-DGL 147
N L S+ E L+ LQ L + N+L ++P + F+ L SL Y + N +TS+ + +
Sbjct: 508 NELTSIPETVFAGLASLQTLYLSGNELTSVPETV--FAGLASLQTLYLSGNELTSVPETV 565
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYL 206
GL LQ + N++T + F L +L + L +N++TS+ ++ +GL L LYL
Sbjct: 566 FAGLASLQTLYLSSNELTSIPETVFAGLASLQYLYLSSNKLTSVPETVFAGLASLQTLYL 625
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
S+N+LT GL L+T+ LSYNK+
Sbjct: 626 SYNELTSVPETVFNGLASLQTLYLSYNKLTS 656
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 7/211 (3%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFL 90
G +L TL L N +T + E F +++ L++ +N LTS+ ++ GL L L L
Sbjct: 614 FAGLASLQTLYLSYNELTSVPETVFNGLASLQTLYLSYNKLTSVPATVFAGLASLRSLGL 673
Query: 91 NNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL-DGL 147
+N+L S+ + L+ L+ L ++ N+L ++P + + L +LY +N +TS+ + +
Sbjct: 674 YDNKLTSVPATVFAGLASLRSLSLDFNELTSIPETVFAGLTSLQTLYLYDNELTSVPETV 733
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYL 206
GL LQ +D N++T + F L ++ ++ L N++TS+ ++ +GL L YL +
Sbjct: 734 FNGLASLQYLYLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETVFNGLASLQYLNV 793
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
S N+LT GL L+T+DLSYNK+
Sbjct: 794 SSNELTSVPETVFDGLASLQTLDLSYNKLTS 824
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 117/208 (56%), Gaps = 7/208 (3%)
Query: 37 TPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNN 93
T +L + L N +T + F +++ L++ N LTS+ ++ GL + L L+ N
Sbjct: 89 TWSLTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIPETVFAGLASIRVLILSGN 148
Query: 94 RLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL-DGLLRG 150
L S+ E L+ LQ L ++ N+L ++P+ + + L +LY ++N++TS+ + + G
Sbjct: 149 ELTSVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNKLTSVPETVFNG 208
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHN 209
L L+ +D N++T V F L +L ++ L +N++TS+ +++ +GL L LYLS+N
Sbjct: 209 LASLRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSIPATVFAGLASLQTLYLSYN 268
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+LT GL LR++ LSYN++
Sbjct: 269 KLTSVPETVFDGLASLRSLYLSYNELTS 296
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFL 90
G +L +L L N +T I E F +++ L++ N LTS+ ++ GL L +L+L
Sbjct: 686 FAGLASLRSLSLDFNELTSIPETVFAGLTSLQTLYLYDNELTSVPETVFNGLASLQYLYL 745
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL-YAN--NNRITSL-D 145
+NN+L S+ E L+ +Q L + N+L ++P + F+ L SL Y N +N +TS+ +
Sbjct: 746 DNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETV--FNGLASLQYLNVSSNELTSVPE 803
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYL 204
+ GL LQ ++ +N++T V F L +L S+ L NN++TS+ ++ +GL L L
Sbjct: 804 TVFDGLASLQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSVPETVFAGLDSLWRL 863
Query: 205 YLSHNQLTEFLL 216
L N+L L
Sbjct: 864 DLHSNRLASLAL 875
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 61 TIRKLHVGFNNLTSLNNSLRG-LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQL 118
++ L++ N L +++ + L+ L L L+NNRL SL G L++L L I N+L
Sbjct: 907 SLEALYLHSNQLADISSDVFAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRL 966
Query: 119 EAL-PSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L P Q S L +L ++N +TSL G L GL ++ ++ N++ + NL
Sbjct: 967 TRLSPGAFQGLSTLATLDLHDNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQALHNLT 1026
Query: 177 NLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L ++SL +NQ+TS+++ L L L YL+LSHN+L E + + L LR + L +N +
Sbjct: 1027 GLRNLSLDDNQLTSLSAGVLEPLAGLEYLWLSHNRLAE-VPAGLGSLASLRYLLLDHNPL 1085
Query: 236 NKF 238
Sbjct: 1086 TSL 1088
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 55/250 (22%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNN 92
G +L L L NN +T I E F +++ L++ N LTS+ ++ GL L +L +++
Sbjct: 736 GLASLQYLYLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETVFNGLASLQYLNVSS 795
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITS------- 143
N L S+ E L+ LQ L + N+L ++P + + L SLY +NN +TS
Sbjct: 796 NELTSVPETVFDGLASLQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSVPETVFA 855
Query: 144 -LDGLLR-----------------------------------------GLTKLQVFNMDF 161
LD L R GL L+ +
Sbjct: 856 GLDSLWRLDLHSNRLASLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLEALYLHS 915
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQ+ + D F L +L +++L NN+++S++ + +GL +L L + HN+LT +
Sbjct: 916 NQLADISSDVFAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRLSPGAFQ 975
Query: 221 GLKRLRTVDL 230
GL L T+DL
Sbjct: 976 GLSTLATLDL 985
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 117/249 (46%), Gaps = 37/249 (14%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL- 79
E S P T D G +L TL L N +T + E F ++R L++ N LTS+ ++
Sbjct: 797 ELTSVPETVFD--GLASLQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSVPETVF 854
Query: 80 RGLTDLNWLFLNNNRLKSLEGQL-------------------------GTLSKLQLLVIE 114
GL L L L++NRL SL L L L+ L +
Sbjct: 855 AGLDSLWRLDLHSNRLASLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLEALYLH 914
Query: 115 QNQLEALPSDIQLFSQLGSLYA---NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRD 170
NQL + SD+ F+QL SL +NNR++SL G GL +L ++ N++T +
Sbjct: 915 SNQLADISSDV--FAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRLSPG 972
Query: 171 EFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
FQ L L ++ L +N +TS+ + +L+GL + L LS N+L + + L LR +
Sbjct: 973 AFQGLSTLATLDLHDNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQALHNLTGLRNLS 1032
Query: 230 LSYNKINKF 238
L N++
Sbjct: 1033 LDDNQLTSL 1041
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLN-NSLRGLTDL 85
++SD +L TL L NN ++ + AF R L + N LT L+ + +GL+ L
Sbjct: 921 ISSDVFAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRLSPGAFQGLSTL 980
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L++N L SL G L L ++ L + N+L LP+
Sbjct: 981 ATLDLHDNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQA------------------- 1021
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
L LT L+ ++D NQ+T + + L L+ + L +N++ + + L L L YL
Sbjct: 1022 ---LHNLTGLRNLSLDDNQLTSLSAGVLEPLAGLEYLWLSHNRLAEVPAGLGSLASLRYL 1078
Query: 205 YLSHNQLTEF---LLD---DIRGL 222
L HN LT LLD D+R L
Sbjct: 1079 LLDHNPLTSLDVSLLDNKPDLRAL 1102
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 57/267 (21%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDL 85
LT+ L G A+ L L +N + + A +R L + N LTSL+ L L L
Sbjct: 993 LTAGALTGLDAMRALDLSSNKLADLPAQALHNLTGLRNLSLDDNQLTSLSAGVLEPLAGL 1052
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL------------------------ 121
+L+L++NRL + LG+L+ L+ L+++ N L +L
Sbjct: 1053 EYLWLSHNRLAEVPAGLGSLASLRYLLLDHNPLTSLDVSLLDNKPDLRALGVNSDAFKAL 1112
Query: 122 ----PS--------------DIQLFSQLGSLYANNNRITSL-----------DGLLRGLT 152
PS D Q S G L +++T L G+L L+
Sbjct: 1113 SAQRPSVLETLLELWLCKSDDDQDQSAAGELLDKLSQLTGLYLFGFDQSLIHAGMLSSLS 1172
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQL 211
++V ++ N + + F L +L S+ L +N +T++ ++LS L+ L L++ ++ +
Sbjct: 1173 SVRVLWLEDNLLDQLPPGTFDQLPSLQSLYLIHNGLTAVPVAALSNLSGLTELHIVNDGI 1232
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
T R L LRT+DLS N I+
Sbjct: 1233 TRVPAGAFRSLSGLRTLDLSGNLISSI 1259
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 158 NMDFNQITMVRRDE--FQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEF 214
++D + + R DE F N +L I L N++TS+ +++ +GL L YLYLS N+LT
Sbjct: 70 SVDLSYAGIRRIDEGVFNNTWSLTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSI 129
Query: 215 LLDDIRGLKRLRTVDLSYNKINK 237
GL +R + LS N++
Sbjct: 130 PETVFAGLASIRVLILSGNELTS 152
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 79 LRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYA 136
L L+ + L+L +N L L G L LQ L + N L A+P + + S L L+
Sbjct: 1168 LSSLSSVRVLWLEDNLLDQLPPGTFDQLPSLQSLYLIHNGLTAVPVAALSNLSGLTELHI 1227
Query: 137 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SS 194
N+ IT + G R L+ L+ ++ N I+ + + F NL N+ + L NN++ ++ +
Sbjct: 1228 VNDGITRVPAGAFRSLSGLRTLDLSGNLISSIEAEAFDNLDNVRQLDLSNNRLVMLDVAE 1287
Query: 195 LSGL 198
L GL
Sbjct: 1288 LRGL 1291
>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
Length = 955
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 126/216 (58%), Gaps = 10/216 (4%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
+ + L PA I L L + N++H ++ P I + L + FN L+SL +
Sbjct: 83 IVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSLPAEIG 142
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L L L L++NRL SL ++G L+KLQ L + NQL +LP++I ++L +L NN+
Sbjct: 143 QLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQ 202
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
++SL + LTKLQ ++ NQ++ + E L NL + L +N+++S+ + + LT
Sbjct: 203 LSSLPAEIGQLTKLQTLDLYNNQLSSLPA-EIGQLTNLQFLHLSHNKLSSLPAEIVQLTN 261
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L +L+LSHN+L+ L +I L L+++DLS+NK++
Sbjct: 262 LQFLHLSHNKLSS-LPAEIVQLTNLQSLDLSHNKLS 296
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ + H+ N L+SL + L L L L++NRL SL ++G L+KLQ L + NQL +L
Sbjct: 78 LEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSL 137
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I ++L SL ++NR++SL + LTKLQ ++ NQ++ + E L L ++
Sbjct: 138 PAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPA-EIGQLTKLQTL 196
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NNQ++S+ + + LTKL L L +NQL+ L +I L L+ + LS+NK++
Sbjct: 197 DLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSS-LPAEIGQLTNLQFLHLSHNKLS 250
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L+ + L PA I L L + N++H ++ P I + L + N L+SL +
Sbjct: 129 LSFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIG 188
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT L L L NN+L SL ++G L+KLQ L + NQL +LP++I + L L+ ++N+
Sbjct: 189 QLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNK 248
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
++SL + LT LQ ++ N+++ + + Q L NL S+ L +N+++S+ + + LTK
Sbjct: 249 LSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIVQ-LTNLQSLDLSHNKLSSLPAEIGQLTK 307
Query: 201 LAYLYLSHNQL 211
L +L L NQL
Sbjct: 308 LQFLNLKGNQL 318
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L+ L + L L + N+L SL ++G L+KLQ L + N+L +LP++I +
Sbjct: 63 NKLSKLPREIGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLT 122
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L SL + N+++SL + L KLQ N+ N+++ + E L L ++ L NNQ++
Sbjct: 123 KLQSLDLSFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPA-EIGQLTKLQTLDLYNNQLS 181
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
S+ + + LTKL L L +NQL+ L +I L +L+T+DL N+++
Sbjct: 182 SLPAEIGQLTKLQTLDLYNNQLSS-LPAEIGQLTKLQTLDLYNNQLS 227
>gi|418701730|ref|ZP_13262652.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759294|gb|EKR25509.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 377
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ N+ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+++DLSYN++
Sbjct: 250 EQLKNLKSLDLSYNQL 265
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L L+ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 6/216 (2%)
Query: 31 SDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
S D++ L +L L NN +T + +E ++ L++ N + + L +L LF
Sbjct: 154 SKDIEQLQNLKSLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLF 213
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
LNNN++ L ++ L KLQ L + NQL LP +I+ L SL + N++T L +
Sbjct: 214 LNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVG 273
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L LQ ++ NQ+ + + E + L NL ++ L NNQ+T + + L L +L L +N
Sbjct: 274 QLENLQTLDLRNNQLKTLPK-EIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYN 332
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 245
QLT L ++I LK L+T++L +N N+F ++ + K
Sbjct: 333 QLTT-LPNEIEQLKNLQTLNL-WN--NQFSSQEKEK 364
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLNLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 255 LKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N++T+L + L LQ N+ NQ + +++ + L
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLNLWNNQFSSQEKEKIRKL 368
>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 377
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+DLSYN++
Sbjct: 250 EQLKNLQTLDLSYNQL 265
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 57 AFPPTI---RKLHVGF---NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I + L V F N +T L N + L L +L+L++N+L +L ++ L LQ
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQT 257
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL LP ++ L +L NN++ +L + L LQ + NQ+T++ +
Sbjct: 258 LDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQ- 316
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
E L NL +SL NQ+T++ + + L L LYL++NQ + + IR L
Sbjct: 317 EIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKEKIRKL 368
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 209 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL 268
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T L + L L +
Sbjct: 269 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLS 328
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 329 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 359
>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 377
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+DLSYN++
Sbjct: 250 EQLKNLQTLDLSYNQL 265
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 209 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL 268
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T L + L L +
Sbjct: 269 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLS 328
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 329 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 359
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 255 LQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N++T+L + L LQ ++ NQ + + + L
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKKRIRKL 368
>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 377
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+DLSYN++
Sbjct: 250 EQLKNLQTLDLSYNQL 265
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLDVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 209 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL 268
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T L + L L +
Sbjct: 269 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLS 328
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ++S
Sbjct: 329 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQLSS 359
>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
Length = 1041
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LTSL S+ L++L L+L NN+L SL + LS L L ++ NQL +LP
Sbjct: 54 LDLGSNELTSLPESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQLTSLPES 113
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I S L LY + N++TSL + L+ L ++ NQ+T + + L NL + L
Sbjct: 114 ITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSL-PESITKLSNLTELYLG 172
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+NQ+TS+ S++ L+ L LYL HNQLT L + I L L ++DLS+NK+
Sbjct: 173 HNQLTSLPESITKLSNLTELYLGHNQLTS-LPESITKLSNLTSLDLSWNKL 222
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 9/224 (4%)
Query: 15 LNLIDLEPETGSHPLTS--DDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNN 71
L ++DL GS+ LTS + + L +L LVNN +T + E+ + +L++ N
Sbjct: 51 LEVLDL----GSNELTSLPESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQ 106
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LTSL S+ L++L L+L+ N+L SL +G LS L L + NQL +LP I S L
Sbjct: 107 LTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNL 166
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY +N++TSL + L+ L + NQ+T + + L NL S+ L N++TS+
Sbjct: 167 TELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSL-PESITKLSNLTSLDLSWNKLTSL 225
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S++ L+ L LYL NQLT L + I L L +DL N++
Sbjct: 226 PESITKLSNLTSLYLGSNQLTS-LPESITTLSNLTVLDLGSNQL 268
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 103/185 (55%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ P +I KL ++G N LTSL S+ L++L L+L +N+L SL + LS L
Sbjct: 155 SLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTS 214
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + N+L +LP I S L SLY +N++TSL + L+ L V ++ NQ+T + +
Sbjct: 215 LDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSNQLTSM-PE 273
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
L NL + L NQ+T + S++ L+ L L L +NQLT L + I L L ++L
Sbjct: 274 SITKLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTR-LPESITKLSNLTKLNL 332
Query: 231 SYNKI 235
S+NK+
Sbjct: 333 SWNKL 337
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ P +I KL + +N LTSL S+ L++L L+L +N+L SL + TLS L +
Sbjct: 201 SLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTV 260
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL ++P I S L LY + N++T L + L+ L ++ NQ+T + +
Sbjct: 261 LDLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTRLP-E 319
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L NL ++L N++TS+ S+ L+ L LYL NQLT
Sbjct: 320 SITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQLT 361
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 98/177 (55%), Gaps = 8/177 (4%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ P +I KL ++G N LTSL S+ L++L L L +N+L S+ + LS L
Sbjct: 224 SLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLTE 283
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L ++ NQL LP I S L L NN++T L + L+ L N+ +N++T + +
Sbjct: 284 LYLDGNQLTRLPESITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSL-PE 342
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD-DIRGLKRLR 226
L NL S+ L++NQ+T + S++ L+ L +LYL++N L ++ +G++ +R
Sbjct: 343 SIGKLSNLTSLYLRDNQLTILPESITTLSNLGWLYLNNNPLENPPIEIATKGIQEIR 399
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 14/197 (7%)
Query: 29 LTSDDLKGT-----PALITLL--LVNNNITHIHENAFPPTIRKL------HVGFNNLTSL 75
LTS DL G P IT L L + H + P +I KL ++G N LTSL
Sbjct: 143 LTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSL 202
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
S+ L++L L L+ N+L SL + LS L L + NQL +LP I S L L
Sbjct: 203 PESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLD 262
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+N++TS+ + L+ L +D NQ+T + + L NL + L+NNQ+T + S+
Sbjct: 263 LGSNQLTSMPESITKLSNLTELYLDGNQLTRLP-ESITKLSNLTKLDLRNNQLTRLPESI 321
Query: 196 SGLTKLAYLYLSHNQLT 212
+ L+ L L LS N+LT
Sbjct: 322 TKLSNLTKLNLSWNKLT 338
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVF 157
Q KL+ L + +L +P D+ QL L +N +TSL G L LT L +
Sbjct: 21 QEAKYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLV 80
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
N N++T + + L NL + L NQ+TS+ S++ L+ L LYLS N+LT L +
Sbjct: 81 N---NKLTSL-PESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTS-LPE 135
Query: 218 DIRGLKRLRTVDLSYNKI 235
I L L ++DL N++
Sbjct: 136 SIGKLSNLTSLDLGGNQL 153
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN +T + E+ + KL++ +N LTSL S+ L++L L+L +N+L L
Sbjct: 304 LTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQLTIL 363
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDI 125
+ TLS L L + N LE P +I
Sbjct: 364 PESITTLSNLGWLYLNNNPLENPPIEI 390
>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 368
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+DLSYN++
Sbjct: 250 EQLKNLQTLDLSYNQL 265
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 209 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL 268
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T L + L L +
Sbjct: 269 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLS 328
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 329 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 359
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 255 LQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
P +I L L N++T+L + L LQ ++ NQ + + EF+N
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKKEFEN 367
>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 377
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+DLSYN++
Sbjct: 250 EQLKNLQTLDLSYNQL 265
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 209 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL 268
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T L + L L +
Sbjct: 269 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLS 328
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 329 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 359
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 255 LQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N++T+L + L LQ ++ NQ + + + L
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKKRIRKL 368
>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 377
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLSNNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+++DLSYN++
Sbjct: 250 EQLKNLKSLDLSYNQL 265
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L L+ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 110/205 (53%), Gaps = 3/205 (1%)
Query: 31 SDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
S D++ L +L L NN +T + +E ++ L++ N + + L +L LF
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLF 213
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
LNNN++ L ++ L KLQ L + NQL LP +I+ L SL + N++T L +
Sbjct: 214 LNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVG 273
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L LQ ++ NQ+ + + E + L NL ++ L NNQ+T + + L L +L L +N
Sbjct: 274 QLENLQTLDLRNNQLKTLPK-EIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYN 332
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNK 234
QLT L ++I LK L+T+ L+ N+
Sbjct: 333 QLTT-LPNEIEQLKNLQTLYLNNNQ 356
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPKEIEQLKNLQVLDLSNNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATFP 200
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+L L ++ L LQLL + N+L
Sbjct: 45 PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L L +NN++T L + L LQ+ + N++T + +D + L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ L NNQ+T++ + + L L LYLS NQ F +I L+ L+ + L+ N+I
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATF-PKEIGQLQNLKVLFLNNNQI 219
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 209 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL 268
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T L + L L +
Sbjct: 269 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLS 328
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 329 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 359
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 255 LKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N++T+L + L LQ ++ NQ + + + L
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKKRIRKL 368
>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 389
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+DLSYN++
Sbjct: 250 EQLKNLQTLDLSYNQL 265
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQL L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLI-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 12/183 (6%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 209 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL 268
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++ L + L L +
Sbjct: 269 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLIILPQEIGKLKNLLWLS 328
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS---------MNSSLSGLTKLAYLYLSHN 209
+ +NQ+T + +E + L NL ++ L NNQ +S S+ LTK+++ +L +N
Sbjct: 329 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSSQEKKEFENFFQSAKFTLTKISF-FLLNN 386
Query: 210 QLT 212
+LT
Sbjct: 387 KLT 389
>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
Length = 425
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 23/195 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 73 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 133 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 192
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 193 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 251
Query: 220 RGLKRLRTVDLSYNK 234
LK L+T+DLSYN+
Sbjct: 252 EQLKNLQTLDLSYNQ 266
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 165 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ ++ + E L NL ++
Sbjct: 225 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPK-EIGQLENLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 284 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 336
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 40 LTKALQNPLDVRVLELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 100 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 159 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 201
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+L L ++ L LQLL + N+L
Sbjct: 47 PLDVRVLELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L L +N++T L + L LQ+ + N++T + +D + L NL
Sbjct: 107 TTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ L NNQ+T++ + + L L LYLS NQ F +I L+ L+ + L+ N+I
Sbjct: 166 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATF-PKEIGQLQNLKVLFLNNNQI 221
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+ K +
Sbjct: 211 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKII 270
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T L + L L +
Sbjct: 271 PKEIGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLS 330
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ +NQ+T + +E + L NL ++ +NQIT+++ + L L L+L++NQLT L +
Sbjct: 331 LVYNQLTTL-PNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQLTT-LPKE 388
Query: 219 IRGLKRLRTVDL 230
I LK L+ + L
Sbjct: 389 IGQLKNLKKLYL 400
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 20/144 (13%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSL 75
L ++ LK P I TL L NN +T P I KL + +N LT+L
Sbjct: 285 LRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-----ILPQEIGKLKNLLWLSLVYNQLTTL 339
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
N + L +L L +N++ +L ++G L L++L + NQL LP +I L LY
Sbjct: 340 PNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLKKLY 399
Query: 136 ANNNRITSLDG--LLRGLTKLQVF 157
NN++++S + + + L K Q++
Sbjct: 400 LNNHQLSSEEKERIRKLLPKCQIY 423
>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 377
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY +NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+DLSYN++
Sbjct: 250 EQLKNLQTLDLSYNQL 265
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L++N++T+++
Sbjct: 98 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLRSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 209 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL 268
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T L + L L +
Sbjct: 269 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLS 328
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 329 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 359
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 255 LQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N++T+L + L LQ ++ NQ + + + L
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKKRIRKL 368
>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 378
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 72 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTIL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 132 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 191
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 192 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 250
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+DLSYN++
Sbjct: 251 EQLKNLQTLDLSYNQL 266
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 164 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 223
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ+T++ + E L NL ++
Sbjct: 224 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPK-EVGQLENLQTL 282
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I LK L + L YN++
Sbjct: 283 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT-ILPQEIGKLKNLLWLSLVYNQL 335
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 39 LTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 98
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 99 YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTILPQ-EIEQLKNLQLLYLHSNRLTTLSKD 157
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 158 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 200
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+L L ++ L LQLL + N+L
Sbjct: 46 PLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP++I+ L L +N++T L + L LQ+ + N++T + +D + L NL
Sbjct: 106 TTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ L NNQ+T++ + + L L LYLS NQ F +I L+ L+ + L+ N+I
Sbjct: 165 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATF-PKEIGQLQNLKVLFLNNNQI 220
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 210 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL 269
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T L + L L +
Sbjct: 270 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLS 329
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 330 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 360
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 256 LQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL 315
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N++T+L + L LQ ++ NQ + + + L
Sbjct: 316 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKKRIRKL 369
>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 377
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTIL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+DLSYN++
Sbjct: 250 EQLKNLQTLDLSYNQL 265
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L LQ ++ +NQ+T++ + E L NL ++
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPK-EVGQLENLQTL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+L++NQLT L +I LK L + L YN++
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLNNNQLT-ILPQEIGKLKNLLWLSLVYNQL 334
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTILPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+L L ++ L LQLL + N+L
Sbjct: 45 PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP++I+ L L +N++T L + L LQ+ + N++T + +D + L NL
Sbjct: 105 TTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ L NNQ+T++ + + L L LYLS NQ F +I L+ L+ + L+ N+I
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATF-PKEIGQLQNLKVLFLNNNQI 219
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 209 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL 268
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ NNN++T L + L L +
Sbjct: 269 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLS 328
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 329 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 359
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 255 LQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTIL 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N++T+L + L LQ ++ NQ + + + L
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKKRIRKL 368
>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 379
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L WL+L N+L +L ++G L KLQ L + +NQL L
Sbjct: 96 LRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 156 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 267
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT L + L +L L L+ N++K++ ++ L KLQ L + +NQL L
Sbjct: 73 LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY N++T+L + L L+ N+ +NQI + + E + L L S+
Sbjct: 133 PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPK-EIEKLQKLQSL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L L L LS N+LT L +I L+ L+ + L N++
Sbjct: 192 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT-LPQEIGHLQNLQDLYLVSNQL 244
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 169 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 288
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T+ + E L NL + L +NQ+T++ + L L L+L++NQLT L +I L
Sbjct: 289 QLTIFPK-EIGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNNNQLTT-LPKEIGQL 346
Query: 223 KRLRTVDLSYNK 234
K L+ + L+ N+
Sbjct: 347 KNLQELYLNNNQ 358
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 165 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 225 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T + L L L L NQLT L + I L+ L+ + L+ N++
Sbjct: 284 DLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTT-LPEGIGQLQNLKVLFLNNNQL 336
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T + +E ++ L++ N LT+L+ + L +L L L +N+L +
Sbjct: 237 LYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE 296
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ+L + NQL LP I L L+ NNN++T+L + L LQ ++
Sbjct: 297 IGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNN 356
Query: 162 NQITMVRRDEFQNL 175
NQ ++ ++ + L
Sbjct: 357 NQFSIEEKERIRKL 370
>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 379
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 96 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 156 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 215 YLPNNQLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 267
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + NQL L
Sbjct: 165 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 225 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T+ + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 284 DLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTT-LPEGIGQLKNLQTLDLDSNQL 336
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 47 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SLY NN++T+L + L KLQ + NQ+T + + E L NL
Sbjct: 107 KTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S++L NQI ++ + L KL L L +NQLT L +I L+ L+++ L N++
Sbjct: 166 KSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTT-LPQEIGQLQNLQSLYLPNNQL 221
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L+L NN+L +L ++
Sbjct: 169 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEI 228
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 288
Query: 163 QITMVRRD--EFQNLH--------------------NLDSISLQNNQITSMNSSLSGLTK 200
Q+T ++ + +NL NL ++ L +NQ+T++ + L
Sbjct: 289 QLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQN 348
Query: 201 LAYLYLSHNQLTEFLLDDIRGL 222
L L+L++NQL+ IR L
Sbjct: 349 LQELFLNNNQLSSQEKKRIRKL 370
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L +L L NN +T + E ++ L++ N LT L N + L +L L L NNRL +L
Sbjct: 211 LQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTL 270
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L + NQL P +I+ L L +N++T+L + L LQ +
Sbjct: 271 SKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 330
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+D NQ+T + + E L NL + L NNQ++S
Sbjct: 331 LDSNQLTTLPQ-EIGQLQNLQELFLNNNQLSS 361
>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 379
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 96 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 156 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L L LYL NQLT L ++IR LK L+T++L N++
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIRQLKNLQTLNLRNNRL 267
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 47 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SLY NN++T+L + L KLQ + NQ+T + + E L NL
Sbjct: 107 KTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S++L NQI ++ + L KL L L +NQLT L +I L+ L+++DLS N++
Sbjct: 166 KSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTT-LPQEIGQLQNLQSLDLSTNRL 221
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 165 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L +R L LQ N+ N++T + + E + L NL S+
Sbjct: 225 PQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T+ + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 284 DLRSNQLTTFPKGIGQLKNLQVLDLGSNQLTT-LPEGIGQLKNLQTLDLDSNQL 336
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 169 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I+ L +L NNR+T+L + L L+ ++ N
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 288
Query: 163 QITMVRRD--EFQNLH--------------------NLDSISLQNNQITSMNSSLSGLTK 200
Q+T + + +NL NL ++ L +NQ+T++ + L
Sbjct: 289 QLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQN 348
Query: 201 LAYLYLSHNQLTEFLLDDIRGL 222
L L+L++NQL+ IR L
Sbjct: 349 LQELFLNNNQLSSQEKKRIRKL 370
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 43 LLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L LV+N +T P IR+L ++ N LT+L+ + L +L L L +N+L
Sbjct: 237 LYLVSNQLT-----ILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLT 291
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+ +G L LQ+L + NQL LP I L +L ++N++T+L + L LQ
Sbjct: 292 TFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQE 351
Query: 157 FNMDFNQITMVRRDEFQNL 175
++ NQ++ + + L
Sbjct: 352 LFLNNNQLSSQEKKRIRKL 370
>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 511
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 52 HIHENAF---PPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
H++ N F P I + LH+ N LT L + L +L L L N+LKSL ++
Sbjct: 274 HLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEI 333
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L KL+ L++ NQL LP +I +L LY +N++T+L + L KL+ ++ N
Sbjct: 334 GKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANN 393
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+ ++ +E L L+ + L NNQ+ + + L KL YL LS+NQL L +I L
Sbjct: 394 QLRLL-PEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLA-TLPKEIGKL 451
Query: 223 KRLRTVDLSYNKINKF 238
++L +DLS N F
Sbjct: 452 EKLEDLDLSGNPFTTF 467
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N +L + L +L L L +N+L L ++G L LQ L++ +NQL++L
Sbjct: 270 LQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSL 329
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L NN++T L + L KL+ ++ NQ+T + + E L L +
Sbjct: 330 PKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPK-EIWKLEKLKYL 388
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+ + + L KL YL LS+NQL L I L++L+ +DLS N++
Sbjct: 389 DLANNQLRLLPEEIGKLQKLEYLDLSNNQL-RLLPQKIGKLEKLKYLDLSNNQL 441
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L + N L L+ + L L L L NN+L +L ++G L L+ L + NQL
Sbjct: 200 SLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVT 259
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L +L+ +N+ +L + L LQ ++ NQ+T++ + E L NL S
Sbjct: 260 LPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQ-EIGQLENLQS 318
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+ S+ + L KL +L L++NQLT L +I L++L + L N++
Sbjct: 319 LILARNQLKSLPKEIGKLQKLKWLILANNQLT-VLPQEIGQLEKLEDLYLEDNQL 372
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++G N L +L + L DL L L+ ++LK+ ++G L L+ L+++ NQL L
Sbjct: 155 LERLYLGGNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVL 214
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L L NN++ +L + L L+ N+ NQ+ + + E L NL ++
Sbjct: 215 SQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQ-EIGALENLQNL 273
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ ++ + L L L+L+HNQLT L +I L+ L+++ L+ N++
Sbjct: 274 HLYSNQFRTLPKQIWQLQNLQDLHLAHNQLT-VLPQEIGQLENLQSLILARNQL 326
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L++ N L +L N + L +L L L NNRL++L ++GTL L+ L +E NQL L
Sbjct: 63 LRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATL 122
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I L +L +NNR+ SL + L KL+ + NQ+ + + E L +L+ +
Sbjct: 123 PNGIGQLENLQALNLHNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQ-EIGTLQDLEEL 181
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +Q+ + + L L L L NQL L +I L+ L + L N++
Sbjct: 182 HLSRDQLKTFPEEIGKLRSLKRLILDSNQLV-VLSQEIGKLRSLERLILENNQL 234
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L+ +L+ D+ L LN ++L++L ++GTL L+ L +E NQL LP++I L L
Sbjct: 30 LDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVL 89
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
NNR+ +L + L L+ N++ NQ+ + Q L NL +++L NN++ S+
Sbjct: 90 SLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQ-LENLQALNLHNNRLKSLPKE 148
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L KL LYL NQL L +I L+ L + LS +++ F
Sbjct: 149 IGKLQKLERLYLGGNQL-RTLPQEIGTLQDLEELHLSRDQLKTF 191
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P ++ LH+ + L +L+ + L +L L L NN+L +L ++G L LQ+L + N+L
Sbjct: 37 PMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRL 96
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP ++ L L NN++ +L + L LQ N+ N++ + + E L L
Sbjct: 97 RTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPK-EIGKLQKL 155
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL--LDDIRGLKRL 225
+ + L NQ+ ++ + L L L+LS +QL F + +R LKRL
Sbjct: 156 ERLYLGGNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRL 204
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L +N +T + + + ++ L + N L L + L L +L L+NN+L+ L +
Sbjct: 365 LYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLPQK 424
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 150
+G L KL+ L + NQL LP +I +L L + N T+ + G
Sbjct: 425 IGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFTTFPKEIVG 473
>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
2000030832]
Length = 594
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+G N T+L ++ L +L L LNNN+LK+L ++G L LQ L + NQL+ L
Sbjct: 193 LKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTL 252
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I L L+ NNN++T+L + L LQ + +NQ+T + ++
Sbjct: 253 PKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLS 312
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E + L NL + L +NQ+T+++ + L KL L+LS NQLT L +I
Sbjct: 313 FYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLT-TLPKEI 371
Query: 220 RGLKRLRTVDLSYNKI 235
L++L+ + L N++
Sbjct: 372 GKLQKLQELHLGDNQL 387
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 100/166 (60%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L ++ L +L WL L++N+L +L ++G L KLQ L + NQL LP +I
Sbjct: 316 NELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQ 375
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L+ +N++T+L + L KL+ + N++T + + E NL L + L NN++T
Sbjct: 376 KLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPK-EIGNLQKLRGLDLGNNKLT 434
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ + L KL +LYL+ NQL + L +I L++LR +DLS N++
Sbjct: 435 ALPIEIGNLQKLKWLYLTFNQL-KTLPKEIGNLQKLRGLDLSDNQL 479
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L L WL LN N L +L ++G L KL L + NQL
Sbjct: 78 LQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTF 137
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L L +N++T+L + L KL+V N+D NQ T + + E + L L +
Sbjct: 138 PKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFTTLPK-EIEKLQKLKEL 196
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L+L++NQL + L +I L+ L+ + L+ N++
Sbjct: 197 HLGSNQFTTLPKEIKKLQNLQGLHLNNNQL-KTLPKEIGKLQNLQGLHLNNNQL 249
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+G N LT+L + L L L+L NNRL +L ++G L KL+ L + N+L AL
Sbjct: 377 LQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKEIGNLQKLRGLDLGNNKLTAL 436
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY N++ +L + L KL+ ++ NQ+T + +E NL L +
Sbjct: 437 PIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTI-PEEIGNLQKLRGL 495
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +NQ+T++ + L L LYLS NQLT L +I L+ L +++LS N + F
Sbjct: 496 DLSDNQLTTLPKEIGNLQDLEVLYLSGNQLT-TLPKEIENLQSLESLNLSNNPLTSF 551
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L +G N LT+L + L L WL+L N+LK+L ++G L KL+ L + NQL +
Sbjct: 423 LRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTI 482
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L ++N++T+L + L L+V + NQ+T + + E +NL +L+S+
Sbjct: 483 PEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPK-EIENLQSLESL 541
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLS 207
+L NN +TS + L L +L L
Sbjct: 542 NLSNNPLTSFPEEIGKLQHLKWLRLE 567
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT+L + L +L L L NN+L +L ++G L KL+ L + N L LP +I +L
Sbjct: 65 LTNLPKEIGNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKL 124
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L NN++T+ + L KLQ ++ NQ+T + + E L L ++L NQ T++
Sbjct: 125 DDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPK-EIGKLQKLKVLNLDGNQFTTL 183
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL L+L NQ T L +I+ L+ L+ + L+ N++
Sbjct: 184 PKEIEKLQKLKELHLGSNQFT-TLPKEIKKLQNLQGLHLNNNQL 226
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L NN +T FP I KL + N LT+L + L L L L+ N+
Sbjct: 127 LRLPNNQLT-----TFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFT 181
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+L ++ L KL+ L + NQ LP +I+ L L+ NNN++ +L + L LQ
Sbjct: 182 TLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQG 241
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+++ NQ+ + + E L NL + L NNQ+T++ + L L L L +NQLT L
Sbjct: 242 LHLNNNQLKTLPK-EIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQLT-TLP 299
Query: 217 DDIRGLKRLRTVDLSYNKI 235
+I L++L+ + N++
Sbjct: 300 KEIGKLQKLQVLSFYSNEL 318
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N T+L + L L L L +N+ +L ++ L LQ L + NQL+ L
Sbjct: 170 LKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTL 229
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ NNN++ +L + L LQ +++ NQ+T + + E L NL +
Sbjct: 230 PKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPK-EIGKLQNLQGL 288
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L KL L N+LT L +I+ L+ L+ +DL N++
Sbjct: 289 GLHYNQLTTLPKEIGKLQKLQVLSFYSNELT-TLPKEIKKLQNLQWLDLHSNQL 341
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 57 AFPPTIRKLHVG-FNNLTSLNNSLRGLTDLNWLFL----NNNRLKSLEGQLGTLSKLQLL 111
F TI G + NLT +L+ TD+ +L L +N++L +L ++G L LQ L
Sbjct: 25 CFCCTIEAKEKGKYYNLTK---ALQHPTDVRYLDLQAKDSNHKLTNLPKEIGNLQNLQKL 81
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQL LP +I +L L N N + +L + L KL + NQ+T + E
Sbjct: 82 SLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPK-E 140
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+ L L +SL +NQ+T++ + L KL L L NQ T L +I L++L+ + L
Sbjct: 141 IEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFT-TLPKEIEKLQKLKELHLG 199
Query: 232 YNK 234
N+
Sbjct: 200 SNQ 202
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT++ + L L L L++N+L +L ++G L L++L + NQL L
Sbjct: 469 LRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTL 528
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I+ L SL +NN +TS + L L+ ++ + ++++ + L
Sbjct: 529 PKEIENLQSLESLNLSNNPLTSFPEEIGKLQHLKWLRLENIPTLLPQKEKIRKL 582
>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 485
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 22/225 (9%)
Query: 11 HAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFN 70
H + ++DL P G + LT+ P I N+ ++ E L++ N
Sbjct: 103 HPTDVRVLDLGPPEGGNKLTT-----LPKEI------GNLQNLQE---------LNLEGN 142
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ 130
LT+L + L L L L++NRL +L ++G L KLQ L + QNQL+ LP +I+ +
Sbjct: 143 QLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQK 202
Query: 131 LGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L +L+ NN +T+L + L LQ N++ NQ T + +E NL L +SL ++++T+
Sbjct: 203 LEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTL-PEEIGNLQKLQKLSLAHSRLTT 261
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L L L+ NQ T L ++I L++L+T+DL+Y+++
Sbjct: 262 LPKEIGNLQNLQELNLNSNQFT-TLPEEIGNLQKLQTLDLNYSRL 305
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ LH+G N LT+L + L +L L LN+N+ +L ++G L KLQ L + ++L L
Sbjct: 203 LEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTL 262
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I L L N+N+ T+L + L KLQ +++++++T + ++
Sbjct: 263 PKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLN 322
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL ++SL N++T++ + L L L L NQLT L + I
Sbjct: 323 LYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLT-TLPEKI 381
Query: 220 RGLKRLRTVDLSYNKI 235
L++L+ + L+ N++
Sbjct: 382 GNLQKLQELSLAGNRL 397
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N T+L + L L L LN +RL +L ++G L KLQ L + +NQL+ L
Sbjct: 272 LQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTL 331
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N N +T+L + L LQ ++ NQ+T + ++ NL L +
Sbjct: 332 PKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLP-EKIGNLQKLQEL 390
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
SL N++ ++ + G + +N L +I L+ L +++LS N + F
Sbjct: 391 SLAGNRLKTLPKEI-GNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISF 446
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N L +L + L +L L LN N L +L ++G L LQ L + NQL L
Sbjct: 318 LQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTL 377
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I +L L NR+ +L + G + N E +NL +L+S+
Sbjct: 378 PEKIGNLQKLQELSLAGNRLKTLPKEI-GNLQNLQELNLNNNQLTTLPKEIENLQSLESL 436
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+L N + S + L KL +LYL N
Sbjct: 437 NLSGNSLISFPEEIGKLQKLKWLYLGGN 464
>gi|417770639|ref|ZP_12418545.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|409947411|gb|EKN97409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
Length = 332
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 72 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY +NR+T+L + L L+ ++ NQ+T + +
Sbjct: 132 PQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 191
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQ+T + + ++ L KL YLYLS NQL L +I
Sbjct: 192 LSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 250
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+++DLSYN++
Sbjct: 251 EQLKNLKSLDLSYNQL 266
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQL L
Sbjct: 164 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL 223
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L L+ ++ +NQ+T++ + E L NL ++
Sbjct: 224 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPK-EVGQLENLQTL 282
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L+NNQ+ ++ + + L L LYL++NQL+ + IR L
Sbjct: 283 DLRNNQLKTLPNEIEQLKNLQTLYLNNNQLSSEEKEKIRKL 323
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 39 LTKALQNPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 98
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L++N++T+++
Sbjct: 99 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLRSNRLTTLSKD 157
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 158 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 200
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+L L ++ L LQLL + N+L
Sbjct: 46 PLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L L +N++T L + L LQ+ + N++T + +D + L NL
Sbjct: 106 TTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKD-IEQLQNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ L NNQ+T++ + + L L LYLS NQ F +I L+ L+ + L+ N++
Sbjct: 165 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATF-PKEIGQLQNLKVLFLNNNQL 220
>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 557
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L +L + L L WL L NN+LKSL ++G L L+ L++E N+LE+ P +
Sbjct: 273 LYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKE 332
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L+ NR T+L + L +L N++ NQ+T + + E L L+ ++L
Sbjct: 333 IGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQ-EIGRLERLEWLNLY 391
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NN++ ++ + L KL +LYL++NQL L +I L+ L+ +DL YN++
Sbjct: 392 NNRLATLPKEIGTLQKLQHLYLANNQLAT-LPKEIGQLQNLKDLDLEYNQL 441
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++G N LT++ + L DL L L NN+L +L ++GTL L+ L + NQL L
Sbjct: 109 LERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTL 168
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I L L NN++ +L + L L+ + +NQ+T + +
Sbjct: 169 PKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLN 228
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL S++L+NN++ ++ + L KL +LYL++NQL L +I
Sbjct: 229 VFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLAT-LPQEI 287
Query: 220 RGLKRLRTVDLSYNKI 235
L+RL + L+ N++
Sbjct: 288 GKLQRLEWLGLTNNQL 303
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 52 HIHENAF---PPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
H+ N F P I LH + N LT+L + L L WL L NNRL +L ++
Sbjct: 343 HLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEI 402
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
GTL KLQ L + NQL LP +I L L N++ +L + L +L+ ++ N
Sbjct: 403 GTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNN 462
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T + +E L + ++L NNQ+ ++ + L L L LS N T F +I GL
Sbjct: 463 QLTTL-PEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTF-PKEIVGL 520
Query: 223 KRLRTVDLS 231
K L+ + L
Sbjct: 521 KHLQILKLK 529
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N LT + L +L +L L NN+LK+L ++ TL KL+ L + +NQL
Sbjct: 37 PMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQL 96
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
LP +I +L LY N++T++ G L+ L +L ++N NQ+ + + E L
Sbjct: 97 ATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYN---NQLITLPQ-EIGTL 152
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L+ ++L NNQ+ ++ + L L L + +NQL L +I L+ L+ + L+YN++
Sbjct: 153 QDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLIT-LPQEIGTLQNLKYLRLAYNQL 211
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT+L + L +L L + NN+L +L ++GTL LQ L +E N+L L
Sbjct: 201 LKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTL 260
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY NN++ +L + L +L+ + NQ+ + + E L NL +
Sbjct: 261 PKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQ-EIGKLQNLKEL 319
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NN++ S + L L L+L +N+ T L +I L RL ++L +N++
Sbjct: 320 ILENNRLESFPKEIGTLPNLQRLHLEYNRFTT-LPQEIGTLHRLPWLNLEHNQL 372
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
N +L+ D+ L L NN+L ++GTL L+ L + NQL+ LP +I+ +L LY
Sbjct: 31 NEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLY 90
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+ N++ +L + L +L+ + NQ+T + + E L +L+ +SL NNQ+ ++ +
Sbjct: 91 LSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQ-EIGALQDLEELSLYNNQLITLPQEI 149
Query: 196 SGLTKLAYLYLSHNQL 211
L L L L++NQL
Sbjct: 150 GTLQDLEELNLANNQL 165
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N L +L + L L L + NN+L +L ++GTL L+ L + NQL L
Sbjct: 155 LEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTL 214
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN++ +L + L LQ N++ N++ + + E L L+ +
Sbjct: 215 PEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPK-EIGALQKLEWL 273
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NNQ+ ++ + L +L +L L++NQL L +I L+ L+ + L N++ F
Sbjct: 274 YLTNNQLATLPQEIGKLQRLEWLGLTNNQLKS-LPQEIGKLQNLKELILENNRLESF 329
>gi|418705776|ref|ZP_13266635.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410764608|gb|EKR35316.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 332
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 72 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKEIEQLKNLQVLDLGSNQLTVL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY +NR+T+L + L L+ ++ NQ+T + +
Sbjct: 132 PQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 191
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQ+T + + ++ L KL YLYLS NQL L +I
Sbjct: 192 LSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 250
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+++DLSYN++
Sbjct: 251 EQLKNLKSLDLSYNQL 266
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQL L
Sbjct: 164 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL 223
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L L+ ++ +NQ+T++ + E L NL ++
Sbjct: 224 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPK-EVGQLENLQTL 282
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L+NNQ+ ++ + + L L LYL++NQL+ + IR L
Sbjct: 283 DLRNNQLKTLPNEIEQLKNLQTLYLNNNQLSSEEKEKIRKL 323
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 39 LTKALQNPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 98
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L++N++T+++
Sbjct: 99 YLRSNRLTTLSKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLRSNRLTTLSKD 157
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 158 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 200
>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
Length = 406
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 5/196 (2%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
L L N +T I +R L V N TS+ + LT L L L+ N+L S+ ++
Sbjct: 147 LFLSGNQLTSI---GLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEI 203
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L+ L+ L + NQL +LP+ I + L L+ ++NR+TSL + LT L+ + N
Sbjct: 204 GQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHN 263
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T + E L +L+ + L+ NQ+TS+ + + LT L YLYL+ NQLT L +I L
Sbjct: 264 QLTSL-PAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTS-LPAEIGQL 321
Query: 223 KRLRTVDLSYNKINKF 238
L+ + L+YN++
Sbjct: 322 TSLKALGLNYNQLTSV 337
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTSL + LT L L+L +N+L SL ++G L+ L+ L +E NQL +LP+ I +
Sbjct: 240 NRLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLT 299
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY N N++TSL + LT L+ +++NQ+T V E L L + L NQ+T
Sbjct: 300 SLTYLYLNENQLTSLPAEIGQLTSLKALGLNYNQLTSV-PAEIGQLAALRELGLFENQLT 358
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTE--FLLDDIR-----GLKRLRTVD 229
S+ + + LT L L L HN+LT + ++R G+ R TVD
Sbjct: 359 SVPAEIGQLTLLEGLELRHNRLTSEPAAIRELRAGCRVGMDRGVTVD 405
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ N LTSL + LT L +LFL++NRL SL ++G L+ L+ L + NQL +
Sbjct: 208 SLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLTS 267
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I + L LY N++TSL + LT L ++ NQ+T + E L +L +
Sbjct: 268 LPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSL-PAEIGQLTSLKA 326
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ L NQ+TS+ + + L L L L NQLT + +I L L ++L +N++
Sbjct: 327 LGLNYNQLTSVPAEIGQLAALRELGLFENQLTS-VPAEIGQLTLLEGLELRHNRLTS 382
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 44/221 (19%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P++ KL + N LTSL + L L L+L N+L SL ++G L L+ L + NQL
Sbjct: 50 PSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEGLFLNGNQLT 109
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLD----------------------GL---LRG---- 150
++P++I + L +L N++TS+ GL LRG
Sbjct: 110 SVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTSIGLLSALRGLGVS 169
Query: 151 -------------LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
LT L+V + +NQ+T V E L +L ++L NQ+TS+ + +
Sbjct: 170 GNQRTSVPAEIGQLTSLEVLELHYNQLTSV-PAEIGQLASLKWLNLHGNQLTSLPAGIGQ 228
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LT L YL+L N+LT L +I L L + L +N++
Sbjct: 229 LTSLTYLFLDDNRLTS-LPAEIGQLTSLERLYLRHNQLTSL 268
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
GQL +L KL L NQL +LP++I L L+ N++TSL + L L+ +
Sbjct: 47 GQLPSLVKLSL---RHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEGLFL 103
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF-LLDD 218
+ NQ+T V + +Q L +L +++L NQ+TS+ + LT L L+LS NQLT LL
Sbjct: 104 NGNQLTSVPAEIWQ-LTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTSIGLLSA 162
Query: 219 IRGL 222
+RGL
Sbjct: 163 LRGL 166
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LTSL + LT L L LN N+L S+ ++G L+ L+ L + +NQL ++P++
Sbjct: 304 LYLNENQLTSLPAEIGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAE 363
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
I + L L +NR+TS +R L MD
Sbjct: 364 IGQLTLLEGLELRHNRLTSEPAAIRELRAGCRVGMD 399
>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 515
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G+N LT+L N + L +L L+L NN+L +L ++G L LQ L + NQL AL
Sbjct: 278 LQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTAL 337
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY + NR+T+L + L LQ + NQ+T++ +E L NL ++
Sbjct: 338 PNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTIL-PNEIGQLKNLQTL 396
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++N++T+++ + L L L L +NQLT F +I LK L+ +DL N++
Sbjct: 397 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTF-PKEIEQLKNLQVLDLGSNQL 449
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++G N LT+L N + L +L L L +N+ K++ ++G L LQ L + NQL AL
Sbjct: 117 LKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTAL 176
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L LY +NR+T L + L L+ N+ NQ T++ + E + L NL +
Sbjct: 177 PNEIGQIQNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPK-EVEKLENLKEL 235
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +N++T++ + + L L L L+HNQ + + +I LK L+T++L YN++
Sbjct: 236 YLGSNRLTTLPNEIGQLKNLRVLELTHNQF-KTISKEIGQLKNLQTLNLGYNQL 288
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++G N LT+L N + L +L L L +N+ K++ ++G L LQ L + NQL AL
Sbjct: 232 LKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQLTAL 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L SLY NN++T+L + L LQ + NQ+T + +E L L +
Sbjct: 292 PNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTAL-PNEIGQLQKLQEL 350
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + + L L LYL NQLT L ++I LK L+T+ L N++
Sbjct: 351 YLSTNRLTTLPNEIGQLQNLQELYLGSNQLT-ILPNEIGQLKNLQTLYLRSNRL 403
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 31/215 (14%)
Query: 50 ITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
+TH P I + L++G N LT+L N + + +L +L+L +NRL L ++G
Sbjct: 145 LTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLTILPKEIG 204
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD---GLLRGL--------- 151
L L+ L + NQ LP +++ L LY +NR+T+L G L+ L
Sbjct: 205 QLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQ 264
Query: 152 -----------TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
LQ N+ +NQ+T + +E L NL S+ L NNQ+T++ + + L
Sbjct: 265 FKTISKEIGQLKNLQTLNLGYNQLTAL-PNEIGQLQNLQSLYLGNNQLTALPNEIGQLQN 323
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LYL +NQLT L ++I L++L+ + LS N++
Sbjct: 324 LQSLYLGNNQLTA-LPNEIGQLQKLQELYLSTNRL 357
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N T L + L +L L+L +NRL +L ++G L L++L + NQ + +
Sbjct: 94 LRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTI 153
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +LY NN++T+L + + LQ + N++T++ + E L NL +
Sbjct: 154 PKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLTILPK-EIGQLKNLRKL 212
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+L +NQ T + + L L LYL N+LT L ++I LK LR ++L++N+
Sbjct: 213 NLYDNQFTILPKEVEKLENLKELYLGSNRLTT-LPNEIGQLKNLRVLELTHNQ 264
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N +L + L +L L LN N+L L ++G L L+ L + NQ
Sbjct: 45 PLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQF 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +++ L LY +NR+T+L + L L+V + NQ + + E L NL
Sbjct: 105 TILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
++ L NNQ+T++ + + + L +LYL N+LT L +I LK LR ++L N+
Sbjct: 164 QTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLT-ILPKEIGQLKNLRKLNLYDNQ 218
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L +L L NN +T + +E +++L++ N LT+L N + L +L L+L +N+L L
Sbjct: 324 LQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTIL 383
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + N+L L DI+ L SL NN++T+ + L LQV +
Sbjct: 384 PNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLD 443
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T + + E L NL L NNQ+T++ + L L LYL NQL+ +
Sbjct: 444 LGSNQLTTLPK-EIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSSEEKER 502
Query: 219 IRGL 222
IR L
Sbjct: 503 IRKL 506
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N T L + L +L L+L +NRL +L ++G L L++L + NQ + +
Sbjct: 209 LRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTI 268
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L +L N++T+L + L LQ + NQ+T + +E L NL S+
Sbjct: 269 SKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTAL-PNEIGQLQNLQSL 327
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + + L KL LYLS N+LT L ++I L+ L+ + L N++
Sbjct: 328 YLGNNQLTALPNEIGQLQKLQELYLSTNRLTT-LPNEIGQLQNLQELYLGSNQL 380
>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 367
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L +G N T+L + L +L L+LN N+L +L ++G L LQ L + +NQL AL
Sbjct: 131 LKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTAL 190
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N N++T+L + L LQ N+D NQ+T + + E L NL +
Sbjct: 191 PKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPK-EIGKLQNLQGL 249
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NN++T++ + L KL +L L+ NQLT + +I L+ L+ ++LS N++
Sbjct: 250 HLGNNKLTALPIEIENLQKLKWLGLNKNQLTT-IPKEIGNLQNLKELNLSSNQL 302
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L LN N+L +L ++G L LQ L +++NQL L
Sbjct: 177 LQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTL 236
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ NN++T+L + L KL+ ++ NQ+T + + E NL NL +
Sbjct: 237 PKEIGKLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPK-EIGNLQNLKEL 295
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+L +NQ+T++ + L KL L L +NQLT L +I L+ L+ + L N
Sbjct: 296 NLSSNQLTTIPKEIENLQKLETLDLYNNQLTT-LPKEIGKLQNLQDLYLGGN 346
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ FN L +L + L L LFL N+ +L ++G L LQ L + +NQL
Sbjct: 107 SLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTT 166
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L LY N N++T+L + L LQ ++ NQ+T + E NL NL
Sbjct: 167 LPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTL-PIEIGNLQNLQG 225
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ+T++ + L L L+L +N+LT + +I L++L+ + L+ N++
Sbjct: 226 LNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPI-EIENLQKLKWLGLNKNQL 279
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL +GFN +T L + L L L L+ N+L +L ++G L L+ L + NQ AL
Sbjct: 85 LQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTAL 144
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY N N++T+L + L LQ ++ NQ+T + + E L NL +
Sbjct: 145 PEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPK-EIGKLQNLQKL 203
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L NQLT L +I L+ L+ + L NK+
Sbjct: 204 VLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTT-LPKEIGKLQNLQGLHLGNNKL 256
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 74 SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS 133
+LN +L+ T + L LN +L +L ++G L L+ L + +N+L LP +I L
Sbjct: 28 TLNEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQK 87
Query: 134 LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
L N+IT L + L LQ N+ FNQ+ + + E NL +L + L NQ T++
Sbjct: 88 LDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPK-EIGNLQHLKRLFLGLNQFTALPE 146
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L LYL+ NQLT L +I L+ L+ + L+ N++
Sbjct: 147 EIGKLQNLQELYLNENQLTT-LPKEIGNLQNLQELYLNENQL 187
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L L L L N++ L ++G L LQ L + NQL L
Sbjct: 62 LKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATL 121
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ N+ T+L + L LQ ++ NQ+T + + E NL NL +
Sbjct: 122 PKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPK-EIGNLQNLQEL 180
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L+ NQLT + +I L+ L+ ++L N++
Sbjct: 181 YLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPI-EIGNLQNLQGLNLDKNQL 233
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R LH+ L +L + L +L L L N+L +L ++G L LQ L + N++
Sbjct: 36 PTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKI 95
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L + N++ +L + L L+ + NQ T + +E L NL
Sbjct: 96 TVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTAL-PEEIGKLQNL 154
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+T++ + L L LYL+ NQLT L +I L+ L+ + L+ N++
Sbjct: 155 QELYLNENQLTTLPKEIGNLQNLQELYLNENQLTA-LPKEIGKLQNLQKLVLNRNQL 210
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+G N LT+L + L L WL LN N+L ++ ++G L L+ L + NQL +
Sbjct: 246 LQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTI 305
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I+ +L +L NN++T+L + L LQ + N + ++++ Q L
Sbjct: 306 PKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNPSLIDQKEKIQKL 359
>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 526
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N LT+L + L +L WL LNNN+L +L ++G L KL+ L +E NQL L
Sbjct: 217 LQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL 276
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L +NN++T+L + L LQ +++ NQ+T + + E L NL +
Sbjct: 277 PKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPK-EIGKLQNLQEL 335
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L KL LY S NQ T + ++I L+ L+ ++L N++
Sbjct: 336 RLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTT-VPEEIWNLQNLQALNLYSNQL 388
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L L L L NN+L +L ++G L LQ L ++ N+L LP +I+
Sbjct: 294 NQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQ 353
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
+L LY++ N+ T++ + L LQ N+ NQ+T + ++
Sbjct: 354 KLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLAT 413
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL + L +NQ+T++ + L L LYL NQLT L +I L+ L
Sbjct: 414 LPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTT-LPKEIENLQSLEY 472
Query: 228 VDLSYNKINKF 238
+ LS N + F
Sbjct: 473 LYLSDNPLTSF 483
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N LT+L + L L L+ + N+ ++ ++ L LQ L + NQL +L
Sbjct: 332 LQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSL 391
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY ++N++ +L + L LQ+ + NQ+T + + E L NL +
Sbjct: 392 PKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPK-EIGKLQNLQEL 450
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L++NQ+T++ + L L YLYLS N LT F ++I L+ L+ L
Sbjct: 451 YLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSF-PEEIGKLQHLKWFRLE 499
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L L++N+L +L ++G L LQ L + +N+L LP +I L
Sbjct: 158 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNL 217
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L+ +N++T+L + L LQ ++ NQ+T + + E L L+++ L+NNQ+T++
Sbjct: 218 QELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPK-EIGKLQKLEALHLENNQLTTL 276
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L +L LS+NQLT L +I L+ L+ + L N++
Sbjct: 277 PKEIGKLQNLQWLGLSNNQLTT-LPKEIGKLQHLQELHLENNQL 319
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 97/187 (51%), Gaps = 13/187 (6%)
Query: 57 AFPPTIRKLHVG-FNNLTSLNNSLRGLTDLNWLFL-------NNNRLKSLEGQLGTLSKL 108
F TI G + NLT +L+ TD+ +L+L +N+ L +L ++G L L
Sbjct: 115 CFCCTIEAKEKGVYYNLTE---ALQHPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNL 171
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L + NQL LP +I L L NR+ +L + L LQ ++ NQ+T +
Sbjct: 172 RDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLP 231
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+ E + L NL + L NNQ+T++ + L KL L+L +NQLT L +I L+ L+ +
Sbjct: 232 K-EIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTT-LPKEIGKLQNLQWL 289
Query: 229 DLSYNKI 235
LS N++
Sbjct: 290 GLSNNQL 296
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LTSL + L +L L+L++N+L +L ++G L LQLL + NQL L
Sbjct: 378 LQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTL 437
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T+L + L L+ + N +T +E L +L
Sbjct: 438 PKEIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSF-PEEIGKLQHLKWF 496
Query: 182 SLQN 185
L+N
Sbjct: 497 RLEN 500
>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 492
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N LT+L + L +L WL LNNN+L +L ++G L KL+ L +E NQL L
Sbjct: 183 LQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL 242
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L +NN++T+L + L LQ +++ NQ+T + + E L NL +
Sbjct: 243 PKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPK-EIGKLQNLQEL 301
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L KL LY S NQ T + ++I L+ L+ ++L N++
Sbjct: 302 RLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTT-VPEEIWNLQNLQALNLYSNQL 354
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L L L L NN+L +L ++G L LQ L ++ N+L LP +I+
Sbjct: 260 NQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQ 319
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
+L LY++ N+ T++ + L LQ N+ NQ+T + ++
Sbjct: 320 KLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLAT 379
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL + L +NQ+T++ + L L LYLS NQL L +I L+ L
Sbjct: 380 LPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLAT-LPKEIENLQSLEY 438
Query: 228 VDLSYNKINKF 238
+ LS N + F
Sbjct: 439 LYLSDNPLTSF 449
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N LT+L + L L L+ + N+ ++ ++ L LQ L + NQL +L
Sbjct: 298 LQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSL 357
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY ++N++ +L + L LQ+ + NQ+T + + E L NL +
Sbjct: 358 PKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPK-EIGKLQNLQEL 416
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L +NQ+ ++ + L L YLYLS N LT F ++I L+ L+ + L
Sbjct: 417 YLSDNQLATLPKEIENLQSLEYLYLSDNPLTSF-PEEIGKLQHLKWLRLE 465
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L L++N+L +L ++G L LQ L + +N+L LP +I L
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNL 183
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L+ +N++T+L + L LQ ++ NQ+T + + E L L+++ L+NNQ+T++
Sbjct: 184 QELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPK-EIGKLQKLEALHLENNQLTTL 242
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L +L LS+NQLT L +I L+ L+ + L N++
Sbjct: 243 PKEIGKLQNLQWLGLSNNQLTT-LPKEIGKLQHLQELHLENNQL 285
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 97/187 (51%), Gaps = 13/187 (6%)
Query: 57 AFPPTIRKLHVG-FNNLTSLNNSLRGLTDLNWLFL-------NNNRLKSLEGQLGTLSKL 108
F TI G + NLT +L+ TD+ +L+L +N+ L +L ++G L L
Sbjct: 81 CFCCTIEAKEKGVYYNLTE---ALQHPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNL 137
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L + NQL LP +I L L NR+ +L + L LQ ++ NQ+T +
Sbjct: 138 RDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLP 197
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+ E + L NL + L NNQ+T++ + L KL L+L +NQLT L +I L+ L+ +
Sbjct: 198 K-EIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTT-LPKEIGKLQNLQWL 255
Query: 229 DLSYNKI 235
LS N++
Sbjct: 256 GLSNNQL 262
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L++N+L +L ++G L LQ L + NQL LP +I+
Sbjct: 375 NQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQ 434
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
L LY ++N +TS + L L+ ++ + ++++ + L
Sbjct: 435 SLEYLYLSDNPLTSFPEEIGKLQHLKWLRLENIPTLLPQKEKIRKL 480
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LTSL + L +L L+L++N+L +L ++G L LQLL + NQL L
Sbjct: 344 LQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTL 403
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY ++N++ +L + L L+ + N +T +E L +L +
Sbjct: 404 PKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSF-PEEIGKLQHLKWL 462
Query: 182 SLQN 185
L+N
Sbjct: 463 RLEN 466
>gi|418701720|ref|ZP_13262642.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759284|gb|EKR25499.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 356
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++G+N LT+L + L +L WL L+ N+ +L + L LQ L + NQ + LP +
Sbjct: 122 LYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKE 181
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L LY N+N+ T L L L V N+ +NQ+T + + E + L NL ++ L
Sbjct: 182 IGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPK-EIEQLKNLHTLYLN 240
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NNQ+T++ + L L +L L +NQLT L +I LK L+T+ L N++
Sbjct: 241 NNQLTALPKEIGQLHDLQWLDLGYNQLTT-LPKEIGQLKNLQTLYLGNNQL 290
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P ++ L + L ++ N + L +L WL LN N+L L ++G L LQ L ++ NQL
Sbjct: 47 PLDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L +LY N++T+L + L LQ N+D NQ T + + EF+ L +L
Sbjct: 107 TTLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPK-EFEQLQSL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ ++ + L L LYL+ NQ T L LK L ++L YN++
Sbjct: 166 QKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFT-ILPKKFEQLKNLHVLNLGYNQL 221
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++KL +G+N +L + L +L L+LN+N+ L + L L +L + NQL
Sbjct: 164 SLQKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTT 223
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I+ L +LY NNN++T+L + L LQ ++ +NQ+T + + E L NL +
Sbjct: 224 LPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPK-EIGQLKNLQT 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L NNQ+T++ + L L L L +NQLT + +I L+ L+T+ L N+
Sbjct: 283 LYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTLPI-EIGQLQNLQTLYLRNNQ 335
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 4/131 (3%)
Query: 62 IRKLHV---GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
++ LHV G+N LT+L + L +L+ L+LNNN+L +L ++G L LQ L + NQL
Sbjct: 208 LKNLHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQL 267
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L +LY NN++T+L + L LQ N+ NQ+T + E L NL
Sbjct: 268 TTLPKEIGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTL-PIEIGQLQNL 326
Query: 179 DSISLQNNQIT 189
++ L+NNQ +
Sbjct: 327 QTLYLRNNQFS 337
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LT+L + L DL WL L N+L +L ++G L LQ L + NQL ALP +
Sbjct: 237 LYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKE 296
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
I L L NN++T+L + L LQ + NQ ++ ++ + L
Sbjct: 297 IGQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNNQFSIEEKERIRKL 347
>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 470
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 103/196 (52%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 164 LQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVL 223
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 224 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 283
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 284 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 342
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+++DLSYN++
Sbjct: 343 EQLKNLKSLDLSYNQL 358
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 72 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY +NR+T+L + L LQV ++ NQ+T++ ++
Sbjct: 132 PQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLY 191
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E + L NL + L +NQ+T + + L L LYL N+LT L DI
Sbjct: 192 LRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTT-LSKDI 250
Query: 220 RGLKRLRTVDLSYNKI 235
L+ L+++DLS N++
Sbjct: 251 EQLQNLKSLDLSNNQL 266
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 256 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 315
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L L+ ++ +NQ+T++ + E L NL ++
Sbjct: 316 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPK-EVGQLENLQTL 374
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I L+ L + L YN++
Sbjct: 375 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTT-LPQEIGQLQNLLWLSLVYNQL 427
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 3/205 (1%)
Query: 31 SDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
S D++ L +L L NN +T + +E ++ L++ N + + L +L LF
Sbjct: 247 SKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLF 306
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
LNNN++ L ++ L KLQ L + NQL LP +I+ L SL + N++T L +
Sbjct: 307 LNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVG 366
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L LQ ++ NQ+ + + E + L NL ++ L NNQ+T++ + L L +L L +N
Sbjct: 367 QLENLQTLDLRNNQLKTLPK-EIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYN 425
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNK 234
QLT L ++I LK L+T+ L+ N+
Sbjct: 426 QLTT-LPNEIEQLKNLQTLYLNNNQ 449
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 39 LTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 98
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L++N++T++ +
Sbjct: 99 YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLRSNRLTTLPNE 157
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQLT L +I LK L+ + L N++
Sbjct: 158 IEQLKNLQVLDLGSNQLT-VLPQEIEQLKNLQLLYLRSNRL 197
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+L L ++ L LQLL + N+L
Sbjct: 46 PLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP++I+ L L +N++T L + L LQ+ + N++T + +E + L NL
Sbjct: 106 TTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL-PNEIEQLKNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +NQ+T + + L L LYL N+LT L ++I LK L+ +DL N++
Sbjct: 165 QVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTT-LPNEIEQLKNLQVLDLGSNQL 220
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 302 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL 361
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T+L + L L +
Sbjct: 362 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLS 421
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 422 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 452
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 348 LKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTL 407
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N++T+L + L LQ ++ NQ + + + L
Sbjct: 408 PQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKKRIRKL 461
>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
Length = 424
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 105/177 (59%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 72 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L LY +NR+T+L + L LQV ++ NQ+T++ + E + L NL +
Sbjct: 132 PQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLL 190
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +N++T+++ + L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 191 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 246
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQ+ L
Sbjct: 210 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 269
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L L+ ++ +NQ+T++ + E L NL ++
Sbjct: 270 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPK-EVGQLENLQTL 328
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+ ++ + L L L+LS+NQLT L +I L+ L + L YN++
Sbjct: 329 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTT-LPQEIGQLQNLLWLSLVYNQL 381
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 3/205 (1%)
Query: 31 SDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
S D++ L +L L NN +T + +E ++ L++ N + + L +L LF
Sbjct: 201 SKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLF 260
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
LNNN++ L ++ L KLQ L + NQL LP +I+ L SL + N++T L +
Sbjct: 261 LNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVG 320
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L LQ ++ NQ+ + + E + L NL ++ L NNQ+T++ + L L +L L +N
Sbjct: 321 QLENLQTLDLRNNQLKTLPK-EIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYN 379
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNK 234
QLT L ++I LK L+T+ L+ N+
Sbjct: 380 QLTT-LPNEIEQLKNLQTLYLNNNQ 403
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 39 LTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 98
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------------------EF 172
Y +NR+T+L + L LQV ++ NQ+T++ ++ E
Sbjct: 99 YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEI 158
Query: 173 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
+ L NL + L +NQ+T + + L L LYL N+LT L DI L+ L+++DLS
Sbjct: 159 EQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTT-LSKDIEQLQNLKSLDLSN 217
Query: 233 NKI 235
N++
Sbjct: 218 NQL 220
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT + +E A ++ L++ N L +L + L +L L L+ N+L L
Sbjct: 256 LKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL 315
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L + NQL+ LP +I+ L +L+ +NN++T+L + L L +
Sbjct: 316 PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLS 375
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +NQ+T + +E + L NL ++ L NNQ +S
Sbjct: 376 LVYNQLTTL-PNEIEQLKNLQTLYLNNNQFSS 406
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT L + L +L L L NN+LK+L ++ L LQ L + NQL L
Sbjct: 302 LKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTL 361
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N++T+L + L LQ ++ NQ + + + L
Sbjct: 362 PQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKKRIRKL 415
>gi|320166208|gb|EFW43107.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1869
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 7/212 (3%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNW 87
S G AL TL L NN I + NAF + +L + N +T++ N+ GL+ LN
Sbjct: 220 SSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNT 279
Query: 88 LFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRI-TSL 144
L L NN L ++ T L+ L L ++ NQ+ +PS + L +LY NN+I T
Sbjct: 280 LHLYNNWLSAIPSSAFTGLTALTQLRLDTNQITTVPSSAFTGLTALQTLYLYNNQIITVA 339
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAY 203
GL LQV +D NQIT V + F L L+++ L NN ++++ SS +GLT L
Sbjct: 340 TNAFSGLAALQVLRLDTNQITTVPANAFSGLSALNTLQLSNNWLSAIPSSAFTGLTALTQ 399
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L +NQ+T GL L+T+ L N+I
Sbjct: 400 LQLYNNQITTVPSSAFTGLTALQTLYLYNNQI 431
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 112/214 (52%), Gaps = 11/214 (5%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNW 87
S G AL TL L NN I + NAF + +L++ N +TS++ N+ GL+ LN
Sbjct: 412 SSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANAFSGLSKLNT 471
Query: 88 LFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITS 143
L LNNN L ++ T L+ L L++ NQ+ +PS F+ L +L Y NN+I +
Sbjct: 472 LQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSA--FTGLTALQFLYLYNNQIAT 529
Query: 144 LD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKL 201
+ GLT L +D NQIT V + F L L+++ L NN ++++ SS +GLT L
Sbjct: 530 VAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPSSAFTGLTAL 589
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L NQ+T + GL L + L N+I
Sbjct: 590 TQLRLDTNQITTVPANAFSGLTALLYLYLYNNQI 623
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 47 NNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLE-GQL 102
NN IT + NAF + +L + N+L+++ +S GLT L L+L NN++ S+
Sbjct: 836 NNQITSLPANAFTGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALWLYNNQITSVVVNAF 895
Query: 103 GTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDGL----LRGLTKLQVF 157
+L+ L L + NQ+ +P S S+L L NNN ++++ L LT+LQ++
Sbjct: 896 TSLTALVQLQLYGNQITTIPASAFSGLSKLSLLQLNNNWLSAIPSSAFTGLTALTQLQLY 955
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLL 216
N NQIT V F L L +SL NQIT++++S +GLT L LYL++N +T
Sbjct: 956 N---NQITTVPSSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNNNTITTIAA 1012
Query: 217 DDIRGLKRLRTVDLSYNKINK 237
+ GL L +DLS ++I
Sbjct: 1013 NAFAGLTALNWLDLSGSQITS 1033
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 106/214 (49%), Gaps = 7/214 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+ S G AL L L NN IT + +AF ++ L++ N + ++ N+ GLT L
Sbjct: 98 IPSSAFTGLTALTQLQLYNNQITTVPSSAFTGLTALQTLYLYNNQIATVAINAFSGLTAL 157
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L+L NN++ S+ LSKL L + N L A+PS + L L NN+IT+
Sbjct: 158 VQLYLYNNQITSISANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITT 217
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GLT LQ + NQI V + F L L + L NQIT++ + + SGL+KL
Sbjct: 218 VPSSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKL 277
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+L +N L+ GL L + L N+I
Sbjct: 278 NTLHLYNNWLSAIPSSAFTGLTALTQLRLDTNQI 311
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 11/193 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDL 85
+ S G AL L L NN IT + +AF + +L + N +T+++ S GLT L
Sbjct: 938 IPSSAFTGLTALTQLQLYNNQITTVPSSAFTGLTALTQLSLYGNQITTISASAFAGLTAL 997
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRI 141
L+LNNN + ++ L+ L L + +Q+ ++P+++ FS L +L NN +
Sbjct: 998 QALYLNNNTITTIAANAFAGLTALNWLDLSGSQITSIPANV--FSSLPALAQLNLYNNWL 1055
Query: 142 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLT 199
+++ GLT L M N+IT + + F L+ L + LQ+NQIT+++ S+ +GL+
Sbjct: 1056 SAVPTSAFTGLTALTQLTMYGNRITTISANAFTGLNALVQLFLQSNQITTISASAFTGLS 1115
Query: 200 KLAYLYLSHNQLT 212
L LYLS+NQ+T
Sbjct: 1116 LLTQLYLSNNQIT 1128
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTS-LNNSLRGLTDL 85
+ S L G AL LLL NN IT + N F + L + N +TS L N+ GLT L
Sbjct: 650 IPSSALTGLSALTQLLLYNNRITSVPANGFSGLTALTDLRLFNNTITSILANAFTGLTKL 709
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN---NNRI 141
+L L+ N+L S+ G L+ L L++ N L A+PS F+ L +L NN+I
Sbjct: 710 TYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSAVPSSA--FTGLTALLYLYLYNNQI 767
Query: 142 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLT 199
T++ GLT L + NQIT + F + +L + L +N+IT++ ++ +GLT
Sbjct: 768 TTVAANAFTGLTALVQLQLYGNQITTISASAFAGMSSLVQLYLYSNRITAIFVNAFTGLT 827
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L+ L +S+NQ+T + GL + + L N ++
Sbjct: 828 HLSLLDISNNQITSLPANAFTGLTAMTQLSLYNNSLSA 865
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 5/182 (2%)
Query: 59 PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQN 116
P T L++ N +TS+++S GLT L +L LNNN L ++ T L+ L L + N
Sbjct: 58 PATTTILYLSSNQITSISSSAFTGLTALTYLQLNNNWLSAIPSSAFTGLTALTQLQLYNN 117
Query: 117 QLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
Q+ +PS + L +LY NN+I ++ GLT L + NQIT + + F
Sbjct: 118 QITTVPSSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANAFSG 177
Query: 175 LHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L L+++ L NN ++++ SS +GLT L L L +NQ+T GL L+T+ L N
Sbjct: 178 LSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQTLYLYNN 237
Query: 234 KI 235
+I
Sbjct: 238 QI 239
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ S G AL LLL NN IT + +AF GLT L +L
Sbjct: 482 IPSSAFTGLTALTQLLLYNNQITTVPSSAF---------------------TGLTALQFL 520
Query: 89 FLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-D 145
+L NN++ ++ L+ L L ++ NQ+ +P++ S+L +L+ NN ++++
Sbjct: 521 YLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPS 580
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
GLT L +D NQIT V + F L L + L NNQIT++ + + SGLT L L
Sbjct: 581 SAFTGLTALTQLRLDTNQITTVPANAFSGLTALLYLYLYNNQITTVPANAFSGLTALVQL 640
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L NQ+T + GL L + L N+I
Sbjct: 641 QLYGNQITTIPSSALTGLSALTQLLLYNNRITS 673
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 105/215 (48%), Gaps = 9/215 (4%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNN--LTSLNNSLRGLTD 84
+ S G AL L L N IT + +AF ++ L++ +NN +T N+ GL
Sbjct: 290 IPSSAFTGLTALTQLRLDTNQITTVPSSAFTGLTALQTLYL-YNNQIITVATNAFSGLAA 348
Query: 85 LNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 142
L L L+ N++ ++ LS L L + N L A+PS + L L NN+IT
Sbjct: 349 LQVLRLDTNQITTVPANAFSGLSALNTLQLSNNWLSAIPSSAFTGLTALTQLQLYNNQIT 408
Query: 143 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK 200
++ GLT LQ + NQI V + F L L + L NNQITS+++ + SGL+K
Sbjct: 409 TVPSSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANAFSGLSK 468
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L L++N L+ GL L + L N+I
Sbjct: 469 LNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQI 503
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
L ++ G A+ L L NN+++ + +AF ++ L + N +TS+ N+ LT L
Sbjct: 842 LPANAFTGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALWLYNNQITSVVVNAFTSLTAL 901
Query: 86 NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L L N++ ++ LSKL LL + N L A+PS + L L NN+IT+
Sbjct: 902 VQLQLYGNQITTIPASAFSGLSKLSLLQLNNNWLSAIPSSAFTGLTALTQLQLYNNQITT 961
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GLT L ++ NQIT + F L L ++ L NN IT++ + + +GLT L
Sbjct: 962 VPSSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNNNTITTIAANAFAGLTAL 1021
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+L LS +Q+T + L L ++L N ++ T
Sbjct: 1022 NWLDLSGSQITSIPANVFSSLPALAQLNLYNNWLSAVPT 1060
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP-TIRKLHVGFNN--LTSLNNSLRGLTDL 85
+ S G AL L L N IT + NAF T +NN T N+ GLT L
Sbjct: 578 IPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTALLYLYLYNNQITTVPANAFSGLTAL 637
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L L N++ ++ L LS L L++ N++ ++P++ + L L NN ITS
Sbjct: 638 VQLQLYGNQITTIPSSALTGLSALTQLLLYNNRITSVPANGFSGLTALTDLRLFNNTITS 697
Query: 144 -LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKL 201
L GLTKL ++ NQ+T + F L L + L NN ++++ SS +GLT L
Sbjct: 698 ILANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSAVPSSAFTGLTAL 757
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
YLYL +NQ+T + GL L + L N+I
Sbjct: 758 LYLYLYNNQITTVAANAFTGLTALVQLQLYGNQI 791
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNW 87
S G AL L L N IT I +AF ++ L++ N +T++ N+ GLT LNW
Sbjct: 964 SSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNNNTITTIAANAFAGLTALNW 1023
Query: 88 LFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSD----IQLFSQLGSLYANN---- 138
L L+ +++ S+ + +L L L + N L A+P+ + +QL ++Y N
Sbjct: 1024 LDLSGSQITSIPANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTALTQL-TMYGNRITTI 1082
Query: 139 --NRITSLDGLLR-----------------GLTKLQVFNMDFNQITMVRRDEF 172
N T L+ L++ GL+ L + NQIT + + F
Sbjct: 1083 SANAFTGLNALVQLFLQSNQITTISASAFTGLSLLTQLYLSNNQITTISANAF 1135
>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 533
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 100/171 (58%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L +L + L L WL L NN+LKSL ++G L L+ L++E N+LE+ P +
Sbjct: 273 LYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKE 332
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I S L L+ NR T+L + L +L N++ NQ+T + + E L L+ ++L
Sbjct: 333 IGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQ-EIGRLERLEWLNLY 391
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NN++ ++ + L KL +LYL++NQL L +I L+ L+ +DLS N++
Sbjct: 392 NNRLATLPKEIGTLRKLQHLYLANNQLAT-LPKEIGQLQNLKDLDLSDNQL 441
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L L WL+L NN+L +L ++G L KL+ L + NQL++L
Sbjct: 247 LQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSL 306
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NNR+ S + L+ LQ ++++N+ T + +E LH L +
Sbjct: 307 PQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTL-PEEIGTLHRLPWL 365
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L++NQ+T++ + L +L +L L +N+L L +I L++L+ + L+ N++
Sbjct: 366 NLEHNQLTTLPQEIGRLERLEWLNLYNNRLAT-LPKEIGTLRKLQHLYLANNQL 418
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 12/174 (6%)
Query: 45 LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LVNN +T FP I + L + N L +L + L L WL+L+ N+LK+L
Sbjct: 45 LVNNQLT-----IFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTL 99
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++GTL L++L + +NQL LPS+I L L+ +N++ +L + L L+ N
Sbjct: 100 PKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELN 159
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ NQ+ ++ + E L +L +S+ NNQ+ ++ + L L YL L++NQLT
Sbjct: 160 LANNQLRILSK-EIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLT 212
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT+L + L +L L + NN+L +L ++GTL LQ L + N+L L
Sbjct: 201 LKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTL 260
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY NN++ +L + L KL+ + NQ+ + + E L NL +
Sbjct: 261 PKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQ-EIGKLQNLKEL 319
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NN++ S + L+ L L+L +N+ T L ++I L RL ++L +N++
Sbjct: 320 ILENNRLESFPKEIGTLSNLQRLHLEYNRFTT-LPEEIGTLHRLPWLNLEHNQL 372
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L V N L +L + L +L +L L N+L +L ++G L LQ L I NQL L
Sbjct: 178 LQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITL 237
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL NNR+ +L + L KL+ + NQ+ + + E L L+ +
Sbjct: 238 PQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQ-EIGKLQKLEWL 296
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NNQ+ S+ + L L L L +N+L F +I L L+ + L YN+
Sbjct: 297 GLTNNQLKSLPQEIGKLQNLKELILENNRLESF-PKEIGTLSNLQRLHLEYNR 348
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 52 HIHENAF---PPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
H+ N F P I LH + N LT+L + L L WL L NNRL +L ++
Sbjct: 343 HLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEI 402
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
GTL KLQ L + NQL LP +I L L ++N++ +L + L +L+ ++ N
Sbjct: 403 GTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNN 462
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
Q+ + + E L NL + L N T+ + G
Sbjct: 463 QLRTLSQ-EIGQLQNLKDLDLSGNPFTTFPQEIVG 496
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 25/201 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ--------LLV 112
++ +LH+ N L +L + L DL L L NN+L+ L ++GTL LQ L+
Sbjct: 131 SLERLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLIT 190
Query: 113 IEQ---------------NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ Q NQL LP +I L L NN++ +L + L LQ
Sbjct: 191 LPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSL 250
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
N+ N++ + + E L L+ + L NNQ+ ++ + L KL +L L++NQL L
Sbjct: 251 NLANNRLVTLPK-EIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKS-LPQ 308
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L+ L+ + L N++ F
Sbjct: 309 EIGKLQNLKELILENNRLESF 329
>gi|320163976|gb|EFW40875.1| tyrosine-protein kinase CSK [Capsaspora owczarzaki ATCC 30864]
Length = 1378
Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats.
Identities = 72/213 (33%), Positives = 114/213 (53%), Gaps = 8/213 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+ +D G AL L L +N IT I N+F P + L + N +T ++ N+ GLT L
Sbjct: 194 IPADAFTGLSALTELTLYDNEITSISANSFTSLPALIILSLDSNRITDISANAFTGLTAL 253
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
N L+L++N+L S+ T LS L L + N++ ++ D L SLY +N ITS
Sbjct: 254 NILYLSHNQLSSISANAFTGLSGLDSLTLFNNEITSIHVDAFTGLPALTSLYLQSNLITS 313
Query: 144 LDGLL-RGLTKLQVFNMDFNQITMVRRDEFQ-NLHNLDSISLQNNQITSMNS-SLSGLTK 200
+ + LT LQ+ + +NQIT + + F +L L+ + + NQ+TS+ + + +GL
Sbjct: 314 IPPFVFTNLTALQILVLAYNQITGIPANAFTADLAALNYLDVSENQVTSIPANAFAGLHS 373
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L+ L+L NQ+T L +GL L + LS N
Sbjct: 374 LSSLFLQGNQITSILTSTFQGLTALTHLILSDN 406
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
++++ PAL TL L +N +T I +AF + +L + N +TS++ NS L L
Sbjct: 170 ISANAFSNLPALTTLALYDNQLTSIPADAFTGLSALTELTLYDNEITSISANSFTSLPAL 229
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L L++NR+ + T L+ L +L + NQL ++ ++ S L SL NN ITS
Sbjct: 230 IILSLDSNRITDISANAFTGLTALNILYLSHNQLSSISANAFTGLSGLDSLTLFNNEITS 289
Query: 144 LD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM--NSSLSGLTK 200
+ GL L + N IT + F NL L + L NQIT + N+ + L
Sbjct: 290 IHVDAFTGLPALTSLYLQSNLITSIPPFVFTNLTALQILVLAYNQITGIPANAFTADLAA 349
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L YL +S NQ+T + GL L ++ L N+I T
Sbjct: 350 LNYLDVSENQVTSIPANAFAGLHSLSSLFLQGNQITSILT 389
Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats.
Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 31/238 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGF--NNLTSLN-NSLRGLTDL 85
++S G AL + L NN IT I ++ F ++G N +TS+ + GL L
Sbjct: 98 ISSGAFSGLSALTYVSLFNNLITSIPDSLFADLTALTYLGLHGNLITSMAATAFTGLNVL 157
Query: 86 NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD----------IQLF-SQLGS 133
L L N++ S+ L L L + NQL ++P+D + L+ +++ S
Sbjct: 158 TRLSLYGNQITSISANAFSNLPALTTLALYDNQLTSIPADAFTGLSALTELTLYDNEITS 217
Query: 134 LYANN--------------NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ AN+ NRIT + GLT L + + NQ++ + + F L L
Sbjct: 218 ISANSFTSLPALIILSLDSNRITDISANAFTGLTALNILYLSHNQLSSISANAFTGLSGL 277
Query: 179 DSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
DS++L NN+ITS++ + +GL L LYL N +T L L+ + L+YN+I
Sbjct: 278 DSLTLFNNEITSIHVDAFTGLPALTSLYLQSNLITSIPPFVFTNLTALQILVLAYNQI 335
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 5/191 (2%)
Query: 47 NNNITHIHENAFPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQLGT- 104
N ++T I +A P +++ N +TS+ S GL+ L L + NN++ S++ T
Sbjct: 525 NRSLTVI-PSAMPSNTLTVYLQANQITSIPASAFAGLSALTILIMFNNKITSIDTDAFTG 583
Query: 105 LSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFN 162
L+ + L ++ N L ++P S I + L L +NN+IT + GLT L ++ N
Sbjct: 584 LTAMSQLNLQDNNLASIPASAIAGLTALKFLDLSNNKITDISSSEFTGLTALNYLWLNSN 643
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+IT + + F +L L + L+ N IT+++++ L YL L +N++T + L
Sbjct: 644 RITSISANAFTSLPALAFVWLRANWITAISANAFAGVTLTYLDLQNNRITSIPANAFTSL 703
Query: 223 KRLRTVDLSYN 233
L T+ L+ N
Sbjct: 704 TALNTLTLNDN 714
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 38/222 (17%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
++++ PALI L L +N IT I NAF + L++ N L+S++ N+ GL+ L
Sbjct: 218 ISANSFTSLPALIILSLDSNRITDISANAFTGLTALNILYLSHNQLSSISANAFTGLSGL 277
Query: 86 NWLFLNNNRLKS----------------LEGQLGT---------LSKLQLLVIEQNQLEA 120
+ L L NN + S L+ L T L+ LQ+LV+ NQ+
Sbjct: 278 DSLTLFNNEITSIHVDAFTGLPALTSLYLQSNLITSIPPFVFTNLTALQILVLAYNQITG 337
Query: 121 LPSD--IQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+P++ + L L + N++TS+ GL L + NQIT + FQ L
Sbjct: 338 IPANAFTADLAALNYLDVSENQVTSIPANAFAGLHSLSSLFLQGNQITSILTSTFQGLTA 397
Query: 178 LDSISLQNNQITSMNSSLSG-------LTKLAYLYLSHNQLT 212
L + L +N T++ L L+ LY+S N T
Sbjct: 398 LTHLILSDNPFTTLPPGLFKGLPNGLILSPPTLLYMSPNNFT 439
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 88 LFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSL-YAN--NNRITS 143
L+L +N + ++ T L+ LQ++ + NQ+ ++ S FS L +L Y + NN ITS
Sbjct: 64 LYLQSNLITNIPASAFTGLTALQVIYLTSNQIVSISSGA--FSGLSALTYVSLFNNLITS 121
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ D L LT L + N IT + F L+ L +SL NQITS+++ + S L L
Sbjct: 122 IPDSLFADLTALTYLGLHGNLITSMAATAFTGLNVLTRLSLYGNQITSISANAFSNLPAL 181
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L NQLT D GL L + L N+I
Sbjct: 182 TTLALYDNQLTSIPADAFTGLSALTELTLYDNEI 215
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNN 92
G AL L++ NN IT I +AF + +L++ NNL S+ S + GLT L +L L+N
Sbjct: 559 GLSALTILIMFNNKITSIDTDAFTGLTAMSQLNLQDNNLASIPASAIAGLTALKFLDLSN 618
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGL 151
N++ + S+ + L L+ N+NRITS+ L
Sbjct: 619 NKITDISS----------------------SEFTGLTALNYLWLNSNRITSISANAFTSL 656
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQ 210
L + N IT + + F + L + LQNN+ITS+ + + + LT L L L+ N
Sbjct: 657 PALAFVWLRANWITAISANAFAGV-TLTYLDLQNNRITSIPANAFTSLTALNTLTLNDNP 715
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNK 234
T +GL + +++++
Sbjct: 716 FTTLPPGLFKGLPNGMVLSVAFSQ 739
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEF 172
+ L +PS + S ++Y N+ITS+ GL+ L + M N+IT + D F
Sbjct: 524 QNRSLTVIPSAMP--SNTLTVYLQANQITSIPASAFAGLSALTILIMFNNKITSIDTDAF 581
Query: 173 QNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L + ++LQ+N + S+ S+++GLT L +L LS+N++T+ + GL L + L+
Sbjct: 582 TGLTAMSQLNLQDNNLASIPASAIAGLTALKFLDLSNNKITDISSSEFTGLTALNYLWLN 641
Query: 232 YNKI 235
N+I
Sbjct: 642 SNRI 645
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 113 IEQNQLEALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRD 170
++ NQ+ ++P S S L L NN+ITS+D GLT + N+ N + +
Sbjct: 544 LQANQITSIPASAFAGLSALTILIMFNNKITSIDTDAFTGLTAMSQLNLQDNNLASIPAS 603
Query: 171 EFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
L L + L NN+IT ++SS +GLT L YL+L+ N++T + L L V
Sbjct: 604 AIAGLTALKFLDLSNNKITDISSSEFTGLTALNYLWLNSNRITSISANAFTSLPALAFVW 663
Query: 230 LSYNKI 235
L N I
Sbjct: 664 LRANWI 669
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 115 QNQ-LEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEF 172
QN+ A+PS I + + LY +N IT++ GLT LQV + NQI + F
Sbjct: 46 QNKGFTAIPSGIPVNTT--QLYLQSNLITNIPASAFTGLTALQVIYLTSNQIVSISSGAF 103
Query: 173 QNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L L +SL NN ITS+ SL + LT L YL L N +T GL L + L
Sbjct: 104 SGLSALTYVSLFNNLITSIPDSLFADLTALTYLGLHGNLITSMAATAFTGLNVLTRLSLY 163
Query: 232 YNKI 235
N+I
Sbjct: 164 GNQI 167
>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
Length = 1109
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 13/203 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L TL L NN ++ + PP I + LH+ N L+SL + LT+L L L++N
Sbjct: 87 LQTLHLGNNQLS-----SLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDSN 141
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L SL + G L+ LQ L + NQL +LP +I ++L SL + N+++SL + LTK
Sbjct: 142 QLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTK 201
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
LQ ++ NQ++ + EF L L S+ L +NQ++S+ + LTKL L L NQL+
Sbjct: 202 LQSLDLRSNQLSSL-PPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSS 260
Query: 214 FLLDDIRGLKRLRTVDLSYNKIN 236
L +I L L+++DLS N+++
Sbjct: 261 -LPPEIVQLTNLQSLDLSSNQLS 282
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 108/192 (56%), Gaps = 2/192 (1%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
+ N + I E A + +L + + LT L + LT+L L L++N+L SL ++G
Sbjct: 1 MTNEELLQIIEQAVKDEVTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQ 60
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
L+ LQ L + NQL +LP +I + L +L+ NN+++SL + LT LQ ++ NQ+
Sbjct: 61 LTNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQL 120
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
+ + E L NL S+ L +NQ++S+ LT L L L NQL+ L +I L +
Sbjct: 121 SSL-PPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSS-LPPEIGQLTK 178
Query: 225 LRTVDLSYNKIN 236
L+++DLS N+++
Sbjct: 179 LQSLDLSRNQLS 190
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 29/209 (13%)
Query: 56 NAFPP------TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
++ PP ++ L +G N L+SL + LT L L L +N+L SL ++ L+ LQ
Sbjct: 213 SSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQ 272
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + NQL +LP +I ++L SLY ++N+++SL + LTKLQ ++ NQ++ +
Sbjct: 273 SLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPP 332
Query: 170 D----------------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ E L NL S+ L +NQ++S+ + LTKL LYLS
Sbjct: 333 EIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLS 392
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NQL+ L +I L +L+++DL N+++
Sbjct: 393 SNQLSS-LPPEIVQLTKLQSLDLGSNQLS 420
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
++ PP I + L +G N L+SL + LT L L L +N+L SL ++ L+ LQ
Sbjct: 305 SSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQ 364
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + NQL +LP +I ++L SLY ++N+++SL + LTKLQ ++ NQ++ + R
Sbjct: 365 SLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPR 424
Query: 170 DEFQNLHNLDSISLQNNQI 188
E + L NL + L+ N +
Sbjct: 425 -EIRQLSNLKKLDLRRNPV 442
>gi|418728092|ref|ZP_13286672.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410777137|gb|EKR57105.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 423
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L ++ L +L L L +N+L +L ++G L LQLL++ NQL
Sbjct: 45 PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
ALP +I L L+ NNN++T+L +R L LQ+ ++ NQ+T++ + E L NL
Sbjct: 105 TALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPK-EIGQLQNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+T++ + L L L L +QLT L +I L+ L +DLS+N++
Sbjct: 164 QELYLSYNQLTTLPKEIGKLENLQLLSLYESQLT-ILPQEIGKLQNLHELDLSHNQL 219
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 34/224 (15%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L L L NN +T P IR+L +G N LT L + L +L L+L+ N
Sbjct: 117 LKVLFLNNNQLT-----TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYN 171
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L +L ++G L LQLL + ++QL LP +I L L ++N++T L + L
Sbjct: 172 QLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQN 231
Query: 154 LQVFNMDFNQITMVRRD--EFQNLH--------------------NLDSISLQNNQITSM 191
LQ F +D NQ+T++ ++ + QNLH NL L NNQ T +
Sbjct: 232 LQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTIL 291
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L LYLS+NQLT F +I L++L+T++L N++
Sbjct: 292 PKEIGQLQNLQELYLSYNQLTTF-PKEIGKLQKLQTLNLWNNQL 334
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++G N LT L + L +L L+NN+ L ++G L LQ L + NQL
Sbjct: 255 LHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTF 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L +L NN++T+L + L L+ N+ NQ+ + + E L NL S+
Sbjct: 315 PKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQ-EIGQLQNLKSL 373
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L+NNQ+T + + L L LYL++NQ + + IR L
Sbjct: 374 DLRNNQLTILPKEIGQLKNLQELYLNNNQFSIEEKERIRKL 414
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L +L+ L+L +N+L L ++G L LQ V++ NQ LP +I
Sbjct: 240 NQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 299
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY + N++T+ + L KLQ N+ NQ+T + +E + L NL +++L NQ+
Sbjct: 300 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTL-PEEIEQLKNLKTLNLSENQLK 358
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
++ + L L L L +NQLT L +I LK L+ + L+ N+
Sbjct: 359 TIPQEIGQLQNLKSLDLRNNQLT-ILPKEIGQLKNLQELYLNNNQ 402
>gi|320165727|gb|EFW42626.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 553
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 7/204 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
++++ L G AL +L L NNIT IH NAF + L + N L+S++ ++L GLT L
Sbjct: 285 ISANALTGLTALRSLSLTQNNITTIHANAFAGLTALASLVLVQNQLSSISADALTGLTAL 344
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
+L LNNNR+ + T L+ L +L + N+L ++ ++ + + L L NNN+ITS
Sbjct: 345 QYLSLNNNRITRISANAFTGLTALTVLYLSYNELPSISANALAGLTALQYLSLNNNQITS 404
Query: 144 LDGLLR-GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GLT L +D NQIT + + F L L +SL +NQITS+ + + +GL L
Sbjct: 405 IAAAAFAGLTALTHLPLDNNQITSISAEAFTGLSALQLLSLNSNQITSIAANAFTGLNAL 464
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRL 225
LYL+ N + + GL +L
Sbjct: 465 TSLYLNQNNIAGISANAFTGLTKL 488
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 7/217 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDL 85
+++D L G + TL L +N IT I NAF + L + +N L S++ ++L GLT +
Sbjct: 141 ISADTLAGLTTMRTLSLGSNGITSISANAFTSLTALTVLDLSYNELPSISADALTGLTAM 200
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L L N+L S+ T L+ L L + N+L ++ ++ + + L L NNNRIT
Sbjct: 201 RTLSLQRNQLTSISANTFTGLTALTGLDLSYNELPSISANALTGLTALQYLSLNNNRITR 260
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GLT L +++NQ+ + + L L S+SL N IT++++ + +GLT L
Sbjct: 261 ISANTFTGLTALTTLYLNYNQLPNISANALTGLTALRSLSLTQNNITTIHANAFAGLTAL 320
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
A L L NQL+ D + GL L+ + L+ N+I +
Sbjct: 321 ASLVLVQNQLSSISADALTGLTALQYLSLNNNRITRI 357
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 25/187 (13%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLV 112
+ P + L + N LTS++ N+ GLT L LFL NN+L S+ L L+ LQ L
Sbjct: 49 PSGIPVDTQSLSLQGNLLTSISANAFTGLTALTTLFLENNQLPSISANALAGLTALQYLS 108
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
+++NQL ++ ++ GLT L N+DFNQ + D
Sbjct: 109 LQRNQLTSISANT----------------------FTGLTALTGLNLDFNQFASISADTL 146
Query: 173 QNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L + ++SL +N ITS+++ + + LT L L LS+N+L D + GL +RT+ L
Sbjct: 147 AGLTTMRTLSLGSNGITSISANAFTSLTALTVLDLSYNELPSISADALTGLTAMRTLSLQ 206
Query: 232 YNKINKF 238
N++
Sbjct: 207 RNQLTSI 213
>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
Length = 1098
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 101/178 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++G N LTS+ + LT L L+L++N L S+ ++ L+ L+ L + NQL +
Sbjct: 588 SLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTS 647
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L +L N++TS+ + LT L+ ++D N++T V D Q L +L+S
Sbjct: 648 VPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLES 707
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L +N +TS + LT L L L N+LT + +I L L+T+DL N++
Sbjct: 708 LELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSV 765
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 7/230 (3%)
Query: 7 FEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKL 65
E+G V L L + TG+ P L AL L++ N +T + E ++R+L
Sbjct: 238 MENGRVVQLELNEFG-LTGAVPAEVGRLT---ALRELVVGGNALTSVPAEIGLLTSLREL 293
Query: 66 HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
+ N LTS+ + LT + L+LN N+L SL ++G L L++L + NQL ++P++I
Sbjct: 294 WLSGNRLTSVPEEIGQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEI 353
Query: 126 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+ + L L NNN++TS+ + LT L ++ NQ+T V E L + + L
Sbjct: 354 RQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPA-EIGQLTAMTELYLNA 412
Query: 186 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ+TS+ + + LT L LYL NQLT + +I L+ L ++LS N++
Sbjct: 413 NQLTSLPAEIWQLTPLTELYLYGNQLTS-VPAEIGQLRSLTELNLSSNQL 461
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTS+ + L L WL+L+ N+L S+ ++G L+ L+ L ++ NQL +
Sbjct: 519 SLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTS 578
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P ++ + L SL NNR+TS+ + LT L + N++T V + +Q L +L
Sbjct: 579 VPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQ-LTSLRE 637
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+SL NQ+TS+ + + LT L L L NQLT + +I L L T+DL NK+
Sbjct: 638 LSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTS-VPAEIGQLTSLETLDLDDNKLTSV 694
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R+ + N LTS+ + LT L L+ N+L S+ ++G L+ L+ L +E N+L ++P
Sbjct: 475 REFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDNKLTSVP 534
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
++I L LY + N++TS+ + LT L+ ++ NQ+T V E L +L S++
Sbjct: 535 AEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPV-EVGQLTSLMSLN 593
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NN++TS+ + + LT L L+L N+LT + +I L LR + L+ N++
Sbjct: 594 LGNNRLTSVPAEIGQLTSLWELWLHDNELTS-VPAEIWQLTSLRELSLAVNQLTSV 648
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L L +N +T + + T +R+L + N LTS+ + LT L L L N+L S
Sbjct: 611 SLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTS 670
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+ ++G L+ L+ L ++ N+L ++P+DI Q + L SL +N +TS + LT L+
Sbjct: 671 VPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKE 730
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ N++T E L +L ++ L+ NQ+TS+ + + LT L +L+L+ N+LT
Sbjct: 731 LTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLT 786
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R L + N +TSL + LT L L+L N+L S+ ++G L+ L+ L + +NQL +
Sbjct: 899 ALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQLTS 958
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L +N++TSL + L L+ ++D NQ+T V E L +L +
Sbjct: 959 VPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSVPA-EIGQLTSLKT 1017
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL-----LDDIRGL----KRLRTVDLS 231
+ L +N +TS+ + + LT L L L NQLT L ++GL RL +V +
Sbjct: 1018 LGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSLQGLYLWQNRLTSVPAA 1077
Query: 232 YNKINKFGT 240
++ G
Sbjct: 1078 IRELRAVGC 1086
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L +G N LTS+ +R LT L L LNNN+L S+ ++G L+ L L + +NQL +
Sbjct: 335 SLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTS 394
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + + LY N N++TSL + LT L + NQ+T V E L +L
Sbjct: 395 VPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPA-EIGQLRSLTE 453
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++L +NQ+T++ + + L LS NQLT + +I L L LS N++
Sbjct: 454 LNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTS-VPAEIGQLTSLEEFGLSGNQLTSV 510
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 3/201 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+LI+L L N +T + T + +L++ N LTSL + LT L L+L N+L S
Sbjct: 381 SLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTS 440
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L L L + NQL +P++I + N++TS+ + LT L+ F
Sbjct: 441 VPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEF 500
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQ+T V E L +L+ + L++N++TS+ + + L L +LYL NQLT +
Sbjct: 501 GLSGNQLTSVPA-EIGRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTS-VPA 558
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
++ L L +DL +N++
Sbjct: 559 EVGQLTSLEKLDLQHNQLTSV 579
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L+ L WL L+ N++ SL ++G L+ L++L + +NQL ++P++I + L LY N++
Sbjct: 897 LSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQL 956
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
TS+ + LT L + NQ+T + E L L+ +SL +NQ+TS+ + + LT L
Sbjct: 957 TSVPAEIGQLTALARLELRDNQLTSLPA-EIGQLAALEKLSLDSNQLTSVPAEIGQLTSL 1015
Query: 202 AYLYLSHNQLTEFLLD--DIRGLKRLR 226
L LS N LT D + LK LR
Sbjct: 1016 KTLGLSDNMLTSVPADIGQLTSLKELR 1042
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 114/232 (49%), Gaps = 10/232 (4%)
Query: 3 RFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHI-HENAFPPT 61
R + DG V L L ++ TG+ P +L AL L L N +T + E +
Sbjct: 867 RVTMENDGRVVQLEL-EVFGLTGAVPA---ELGRLSALRWLSLHGNQVTSLPAEIGQLTS 922
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N LTS+ + LT L L+L N+L S+ ++G L+ L L + NQL +L
Sbjct: 923 LEVLYLTENQLTSVPAEIGQLTSLRELYLYENQLTSVPAEIGQLTALARLELRDNQLTSL 982
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I + L L ++N++TS+ + LT L+ + N +T V D Q L +L +
Sbjct: 983 PAEIGQLAALEKLSLDSNQLTSVPAEIGQLTSLKTLGLSDNMLTSVPADIGQ-LTSLKEL 1041
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L NQ+TS+ + LT L LYL N+LT ++ LR V N
Sbjct: 1042 RLGGNQLTSVPEEIGQLTSLQGLYLWQNRLTSV----PAAIRELRAVGCYVN 1089
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 33/210 (15%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N LTS+ + LT L WL+LN+NRL S+ +LG L+ L+ L ++ NQL
Sbjct: 751 SLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWLKGNQLTI 810
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDG--------------LLRGLTKLQVFNMDFNQITM 166
+P++I+ G ++ +T +G L+G+ D+ ++TM
Sbjct: 811 VPAEIRELKAAGCRVDLDDGVTMDEGDDARALRTWRAMCPDLQGMWPEDEQPEDWYRVTM 870
Query: 167 ------------------VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
E L L +SL NQ+TS+ + + LT L LYL+
Sbjct: 871 ENDGRVVQLELEVFGLTGAVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTE 930
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQLT + +I L LR + L N++
Sbjct: 931 NQLTS-VPAEIGQLTSLRELYLYENQLTSV 959
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ +LG LS L+ L + NQ+ +LP++I + L LY N++TS+ + LT L+
Sbjct: 889 AVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRE 948
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ NQ+T V E L L + L++NQ+TS+ + + L L L L NQLT +
Sbjct: 949 LYLYENQLTSVPA-EIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTS-VP 1006
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+I L L+T+ LS N +
Sbjct: 1007 AEIGQLTSLKTLGLSDNMLTSV 1028
>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
Length = 351
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 68 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 127
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 128 PQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 186
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 187 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 239
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 19 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 78
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SLY NN++T+L + L KLQ + NQ+T + + E L NL
Sbjct: 79 KTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNL 137
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S++L NQI ++ + L KL L L +NQLT L +I L+ L+++DLS N++
Sbjct: 138 KSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLT-TLPQEIGQLQNLQSLDLSTNRL 193
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 137 LKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 196
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 197 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 255
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T+ + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 256 DLRSNQLTTFPKEIGQLKNLQVLDLGSNQLT-TLPEGIGQLKNLQTLDLDSNQL 308
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 141 NLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 200
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 201 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 260
Query: 163 QITMVRRD--EFQNLH--------------------NLDSISLQNNQITSMNSSLSGLTK 200
Q+T ++ + +NL NL ++ L +NQ+T++ + L
Sbjct: 261 QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQN 320
Query: 201 LAYLYLSHNQLTEFLLDDIRGL 222
L L+L++NQL+ IR L
Sbjct: 321 LQELFLNNNQLSSQEKKRIRKL 342
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 23/127 (18%)
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------------------EFQNLH 176
NR +L + L LQ N++ NQ+T++ ++ E + L
Sbjct: 30 NRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQ 89
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L S+ L NNQ+T++ + L KL +LYL NQLT L +I LK L++++LSYN+I
Sbjct: 90 KLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT-TLPQEIGQLKNLKSLNLSYNQIK 148
Query: 237 KFGTRNE 243
+ E
Sbjct: 149 TIPKKIE 155
>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 328
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 45 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 104
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 105 PQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 163
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 164 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 216
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 114 LKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 173
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 174 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 232
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T+ + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 233 DLRSNQLTTFPKEIGQLKNLQVLDLGSNQLT-TLPEGIGQLKNLQTLDLDSNQL 285
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ + L L+ NR K+L ++G L L+ L + NQ++ +P +I+ +L SL
Sbjct: 12 LTKALQNPLKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSL 71
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y NN++T+L + L KLQ + NQ+T + + E L NL S++L NQI ++
Sbjct: 72 YLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNLKSLNLSYNQIKTIPKK 130
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL L L +NQLT L +I L+ L+++DLS N++
Sbjct: 131 IEKLQKLQSLGLDNNQLT-TLPQEIGQLQNLQSLDLSTNRL 170
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 118 NLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 177
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 178 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 237
Query: 163 QITMVRRD--EFQNLH--------------------NLDSISLQNNQITSMNSSLSGLTK 200
Q+T ++ + +NL NL ++ L +NQ+T++ + L
Sbjct: 238 QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQN 297
Query: 201 LAYLYLSHNQLTEFLLDDIRGL 222
L L+L++NQL+ IR L
Sbjct: 298 LQELFLNNNQLSSQEKKRIRKL 319
>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 423
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L ++ L +L L L +N+L +L ++G L LQLL++ NQL
Sbjct: 45 PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
ALP +I L L+ NNN++T+L +R L LQ+ ++ NQ+T++ + E L NL
Sbjct: 105 TALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPK-EIGQLQNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+T++ + L L L L +QLT L +I L+ L +DLS+N++
Sbjct: 164 QELYLSYNQLTTLPKEIGKLENLQLLSLYESQLT-ILPQEIGKLQNLHELDLSHNQL 219
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 34/224 (15%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L L L NN +T P IR+L +G N LT L + L +L L+L+ N
Sbjct: 117 LKVLFLNNNQLT-----TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYN 171
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L +L ++G L LQLL + ++QL LP +I L L ++N++T L + L
Sbjct: 172 QLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQN 231
Query: 154 LQVFNMDFNQITMVRRD--EFQNLH--------------------NLDSISLQNNQITSM 191
LQ F +D NQ+T++ ++ + QNLH NL L NNQ T +
Sbjct: 232 LQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTIL 291
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L LYLS+NQLT F +I L++L+T++L N++
Sbjct: 292 PKEIGQLQNLQELYLSYNQLTTF-PKEIGKLQKLQTLNLWNNQL 334
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 5/176 (2%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L +L+ L+L +N+L L ++G L LQ V++ NQ LP +I
Sbjct: 240 NQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 299
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY + N++T+ + L KLQ N+ NQ+T + +E + L NL +++L NQ+
Sbjct: 300 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTL-PEEIEQLKNLKTLNLSENQLK 358
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 245
++ + L L L LS+NQLT L +I LK L+T++L +N N+F ++ + K
Sbjct: 359 TIPQEIGQLQNLKSLDLSNNQLTT-LPKEIEQLKNLQTLNL-WN--NQFSSQEKEK 410
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++G N LT L + L +L L+NN+ L ++G L LQ L + NQL
Sbjct: 255 LHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTF 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L +L NN++T+L + L L+ N+ NQ+ + + E L NL S+
Sbjct: 315 PKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQ-EIGQLQNLKSL 373
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+T++ + L L L L +NQ + + IR L
Sbjct: 374 DLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKEKIRKL 414
>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 394
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ NNLT+L + L +L L L+ N+L +L ++G L L+ L + NQ L
Sbjct: 177 LKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTL 236
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N++T+L + L KLQ +D NQ+T + + E NL NL +
Sbjct: 237 PKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQELRLDHNQLTTLPK-EIGNLQNLKDL 295
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+L++NQ+T++ + L L YL LS NQLT L +I L+ L ++DLS N + F
Sbjct: 296 NLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTA-LPKEIENLQSLESLDLSGNPLTSF 351
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ FN LT++ + L L L L N+L +L ++G L LQ L + +NQL
Sbjct: 107 SLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTT 166
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P +I L LY +N +T+L + L LQ +D NQ+T + + E L NL
Sbjct: 167 IPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQ-EIGKLQNLRG 225
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ T++ + L L L L+ NQLT L +I L++L+ + L +N++
Sbjct: 226 LALTGNQFTTLPKEIGNLQNLQGLALTRNQLTT-LPKEIGNLQKLQELRLDHNQL 279
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
+ LN +L+ T + L+LN +L +L ++G L LQ L + +NQL +P +I L
Sbjct: 27 SKLNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQ 86
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L N+IT L + L LQ N+ FNQ+T + + E L +L ++ L NQ+T++
Sbjct: 87 KLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPK-EIWELQHLQTLHLVYNQLTTLP 145
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L L L+L NQLT + +I L+ L+ + L +N
Sbjct: 146 KEIGKLQNLQELHLWENQLTT-IPQEIGNLQNLKELYLMHN 185
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ L +L + L +L L L N+L ++ ++G L LQ L + N++
Sbjct: 36 PTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKI 95
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP++I L L + N++T++ + L LQ ++ +NQ+T + + E L NL
Sbjct: 96 TVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPK-EIGKLQNL 154
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+T++ + L L LYL HN LT L ++ L+ L+ + L N++
Sbjct: 155 QELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTT-LPKEVGQLQNLQKLILDKNQL 210
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N T+L + L +L L L N+L +L ++G L KLQ L ++ NQL L
Sbjct: 223 LRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQELRLDHNQLTTL 282
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L +N++T++ + L L+ N+ NQ+T + + E +NL +L+S+
Sbjct: 283 PKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPK-EIENLQSLESL 341
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSH 208
L N +TS + L L L L +
Sbjct: 342 DLSGNPLTSFPEEIGKLQHLKRLRLEN 368
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L + L +L L L +N+L ++ ++G L L+ L + NQL AL
Sbjct: 269 LQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTAL 328
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNM 159
P +I+ L SL + N +TS G L+ L +L++ N+
Sbjct: 329 PKEIENLQSLESLDLSGNPLTSFPEEIGKLQHLKRLRLENI 369
>gi|418739213|ref|ZP_13295601.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|410753465|gb|EKR10430.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 281
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N LT+L + L +L L L+NN+L +L ++G L KL+ L ++ NQL
Sbjct: 36 PMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQL 95
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L SL NN++T+L + L KLQV +++ NQ+T + + E L L
Sbjct: 96 TTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPK-EIGYLKKL 154
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NNQ+T++ + L +L L L NQLT L +I L+ L +DL N++
Sbjct: 155 QELYLINNQLTTLPKEIGYLEELWLLDLRKNQLT-TLPKEIGYLEELWLLDLRKNQL 210
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
LN +L+ D+ L L+ N+L +L ++ L +L+ L + NQL LP +I +L L
Sbjct: 29 LNKALQNPMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYL 88
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y ++N++T+L + L L+ ++ NQ+T + + E + L L + L +NQ+T++
Sbjct: 89 YLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPK-EIEYLKKLQVLDLNDNQLTTIPKE 147
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL LYL +NQLT L +I L+ L +DL N++
Sbjct: 148 IGYLKKLQELYLINNQLT-TLPKEIGYLEELWLLDLRKNQL 187
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L L L LN+N+L ++ ++G L KLQ L + NQL LP +I
Sbjct: 116 NQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLE 175
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L N++T+L + L +L + ++ NQ+T + + E L L+ + L+NNQ T
Sbjct: 176 ELWLLDLRKNQLTTLPKEIGYLEELWLLDLRKNQLTTLPK-EIGKLQKLEKLYLKNNQFT 234
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+ + L KL L LDDI LK
Sbjct: 235 TFPKEIGKLQKLNTLN----------LDDIPALK 258
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 47 NNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
+N +T I E + +++L++ N LT+L + L +L L L N+L +L ++G L
Sbjct: 138 DNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGYL 197
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
+L LL + +NQL LP +I +L LY NN+ T+ + L KL N+D
Sbjct: 198 EELWLLDLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLD 252
>gi|418686305|ref|ZP_13247474.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410739259|gb|EKQ83988.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 258
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N LT+L + L +L L L+NN+L +L ++G L KL+ L ++ NQL
Sbjct: 36 PMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQL 95
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L SL NN++T+L + L KLQV +++ NQ+T + + E L L
Sbjct: 96 TTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPK-EIGYLKKL 154
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+T++ + L +L L L NQLT L +I L++L + L N+ F
Sbjct: 155 QELYLINNQLTTLPKEIGYLEELWLLDLRKNQLT-TLPKEIGKLQKLEKLYLKNNQFTTF 213
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LT+L + L DL L L NN+L +L ++ L KLQ+L + NQL +
Sbjct: 85 LRYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTI 144
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY NN++T+L + L +L + ++ NQ+T + + E L L+ +
Sbjct: 145 PKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPK-EIGKLQKLEKL 203
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
L+NNQ T+ + L KL L LDDI LK
Sbjct: 204 YLKNNQFTTFPKEIGKLQKLNTLN----------LDDIPALK 235
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
LN +L+ D+ L L+ N+L +L ++ L +L+ L + NQL LP +I +L L
Sbjct: 29 LNKALQNPMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYL 88
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y ++N++T+L + L L+ ++ NQ+T + + E + L L + L +NQ+T++
Sbjct: 89 YLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPK-EIEYLKKLQVLDLNDNQLTTIPKE 147
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL LYL +NQLT L +I L+ L +DL N++
Sbjct: 148 IGYLKKLQELYLINNQLT-TLPKEIGYLEELWLLDLRKNQL 187
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 45 LVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L NN +T + E + ++ L + N LT++ + L L L+L NN+L +L ++G
Sbjct: 113 LRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIG 172
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
L +L LL + +NQL LP +I +L LY NN+ T+ + L KL N+D
Sbjct: 173 YLEELWLLDLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLD 229
>gi|418727710|ref|ZP_13286298.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409959068|gb|EKO22845.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 423
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L ++ L +L L L +N+L +L ++G L LQLL++ NQL
Sbjct: 45 PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
ALP +I L L+ NNN++T+L +R L LQ+ ++ NQ+T++ + E L NL
Sbjct: 105 TALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPK-EIGQLQNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+T++ + L L L L +QLT L +I L+ L +DLS+N++
Sbjct: 164 QELYLSYNQLTTLPKEIGKLENLQLLSLYESQLT-ILPQEIGKLQNLHELDLSHNQL 219
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 34/224 (15%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L L L NN +T P IR+L +G N LT L + L +L L+L+ N
Sbjct: 117 LKVLFLNNNQLT-----TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYN 171
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L +L ++G L LQLL + ++QL LP +I L L ++N++T L + L
Sbjct: 172 QLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQN 231
Query: 154 LQVFNMDFNQITMVRRD--EFQNLH--------------------NLDSISLQNNQITSM 191
LQ F +D NQ+T++ ++ + QNLH NL L NNQ T +
Sbjct: 232 LQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTIL 291
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L LYLS+NQLT F +I L++L+T++L N++
Sbjct: 292 PKEIGQLQNLQELYLSYNQLTTF-PKEIGKLQKLQTLNLWNNQL 334
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 5/176 (2%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L +L+ L+L +N+L L ++G L LQ V++ NQ LP +I
Sbjct: 240 NQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 299
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY + N++T+ + L KLQ N+ NQ+T + +E + L NL +++L NQ+
Sbjct: 300 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTL-PEEIEQLKNLKTLNLSENQLK 358
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 245
++ + L L L LS+NQLT L +I LK L+T++L +N N+F ++ + K
Sbjct: 359 TIPQEIGQLQNLKLLDLSNNQLTT-LPKEIEQLKNLQTLNL-WN--NQFSSQEKEK 410
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++G N LT L + L +L L+NN+ L ++G L LQ L + NQL
Sbjct: 255 LHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTF 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L +L NN++T+L + L L+ N+ NQ+ + + E L NL +
Sbjct: 315 PKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQ-EIGQLQNLKLL 373
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+T++ + L L L L +NQ + + IR L
Sbjct: 374 DLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKEKIRKL 414
>gi|255081118|ref|XP_002504125.1| predicted protein [Micromonas sp. RCC299]
gi|226519392|gb|ACO65383.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTSL + LT L L+L NRL SL ++G L+ L+ L + NQL++
Sbjct: 45 SLERLELDDNKLTSLPAEIGQLTSLKSLWLERNRLMSLPAEIGQLASLEKLYLGDNQLKS 104
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P+ I + L +LY N+N++TS+ + LT L+V ++ NQ+T V D Q + +L
Sbjct: 105 VPAAIGHLTSLENLYLNDNKLTSVPAAIWQLTSLKVLYLNDNQLTSVPADIGQ-VTSLRE 163
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L NNQ+TS+ + + T L LYL+ NQL
Sbjct: 164 LYLWNNQLTSVRAEIGRFTSLTLLYLNGNQLA 195
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L+ +N +T + E ++ +L + N LT++ ++ LT L L L++N+L SL +
Sbjct: 3 LVFCDNQLTSVPAEIGKLTSLERLDLRSNKLTTVPAAIWQLTSLERLELDDNKLTSLPAE 62
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L+ L+ L +E+N+L +LP++I + L LY +N++ S+ + LT L+ ++
Sbjct: 63 IGQLTSLKSLWLERNRLMSLPAEIGQLASLEKLYLGDNQLKSVPAAIGHLTSLENLYLND 122
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
N++T V +Q L +L + L +NQ+TS+ + + +T L LYL +NQLT
Sbjct: 123 NKLTSVPAAIWQ-LTSLKVLYLNDNQLTSVPADIGQVTSLRELYLWNNQLT 172
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL++G N L S+ ++ LT L L+LN+N+L S+ + L+ L++L + NQL +
Sbjct: 91 SLEKLYLGDNQLKSVPAAIGHLTSLENLYLNDNKLTSVPAAIWQLTSLKVLYLNDNQLTS 150
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P+DI + L LY NN++TS+ + T L + ++ NQ+ V +E L +L
Sbjct: 151 VPADIGQVTSLRELYLWNNQLTSVRAEIGRFTSLTLLYLNGNQLASVP-EEIGRLTSLSR 209
Query: 181 ISLQNNQITSMNSSLSGL 198
+ L +NQ+TS+ +++ L
Sbjct: 210 LLLNDNQLTSLPAAIRDL 227
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 34 LKGTPALI-------TLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDL 85
LK PA I L L +N +T + + T ++ L++ N LTS+ + +T L
Sbjct: 102 LKSVPAAIGHLTSLENLYLNDNKLTSVPAAIWQLTSLKVLYLNDNQLTSVPADIGQVTSL 161
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
L+L NN+L S+ ++G + L LL + NQL ++P +I + L L N+N++TSL
Sbjct: 162 RELYLWNNQLTSVRAEIGRFTSLTLLYLNGNQLASVPEEIGRLTSLSRLLLNDNQLTSLP 221
Query: 146 GLLRGL 151
+R L
Sbjct: 222 AAIRDL 227
>gi|428171120|gb|EKX40039.1| hypothetical protein GUITHDRAFT_50256, partial [Guillardia theta
CCMP2712]
Length = 302
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 46 VNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSL-EGQ 101
+ N +T + E F ++ L++ LTSL + GL L L L N L SL EG
Sbjct: 75 LGNVLTSLPEGVFSELSGLQWLNLWNTQLTSLPEGVFSGLQGLQGLSLVGNVLTSLPEGV 134
Query: 102 LGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNM 159
LS LQ L + QL +LP + S L LY N +TSL +G+ GL+ L+ +
Sbjct: 135 FSGLSGLQWLELWDTQLTSLPVGVFSGLSGLQGLYLGGNELTSLPEGVFSGLSGLRSLEL 194
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDD 218
NQ+T + F L L + L + Q+TS+ + SGL+ L YLYLSHNQLT
Sbjct: 195 SHNQLTSLPEGVFSGLSGLQGLYLSHTQLTSLPEGVFSGLSGLKYLYLSHNQLTSLPEGV 254
Query: 219 IRGLKRLRTVDLSYNKI 235
GL L+ +DL YN++
Sbjct: 255 FSGLSGLQYLDLQYNQL 271
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 94/175 (53%), Gaps = 7/175 (4%)
Query: 45 LVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSLE-G 100
L N +T + E F ++ L + N LTSL + GL+ L WL L + +L SL G
Sbjct: 98 LWNTQLTSLPEGVFSGLQGLQGLSLVGNVLTSLPEGVFSGLSGLQWLELWDTQLTSLPVG 157
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFN 158
LS LQ L + N+L +LP + S L SL ++N++TSL +G+ GL+ LQ
Sbjct: 158 VFSGLSGLQGLYLGGNELTSLPEGVFSGLSGLRSLELSHNQLTSLPEGVFSGLSGLQGLY 217
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLT 212
+ Q+T + F L L + L +NQ+TS+ + SGL+ L YL L +NQLT
Sbjct: 218 LSHTQLTSLPEGVFSGLSGLKYLYLSHNQLTSLPEGVFSGLSGLQYLDLQYNQLT 272
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 6/166 (3%)
Query: 35 KGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLN 91
G L L L + +T + F ++ L++G N LTSL + GL+ L L L+
Sbjct: 136 SGLSGLQWLELWDTQLTSLPVGVFSGLSGLQGLYLGGNELTSLPEGVFSGLSGLRSLELS 195
Query: 92 NNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL-DGLL 148
+N+L SL EG LS LQ L + QL +LP + S L LY ++N++TSL +G+
Sbjct: 196 HNQLTSLPEGVFSGLSGLQGLYLSHTQLTSLPEGVFSGLSGLKYLYLSHNQLTSLPEGVF 255
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
GL+ LQ ++ +NQ+T + F + ++L ++ LQNN +T ++S
Sbjct: 256 SGLSGLQYLDLQYNQLTCIPSQAFSDSNDLINVWLQNNHLTCYHAS 301
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 83/175 (47%), Gaps = 9/175 (5%)
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
G N+T GL L L L N L SL EG L LQ L + N+L +LP +
Sbjct: 7 GITNMT--KGVFSGLQGLQSLSLGANELTSLPEGVFSGLEGLQYLDLSGNELTSLPEGV- 63
Query: 127 LFSQLGSL--YANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
FS L L + N +TSL +G+ L+ LQ N+ Q+T + F L L +SL
Sbjct: 64 -FSGLSGLQGLSLGNVLTSLPEGVFSELSGLQWLNLWNTQLTSLPEGVFSGLQGLQGLSL 122
Query: 184 QNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
N +TS+ + SGL+ L +L L QLT + GL L+ + L N++
Sbjct: 123 VGNVLTSLPEGVFSGLSGLQWLELWDTQLTSLPVGVFSGLSGLQGLYLGGNELTS 177
>gi|417763567|ref|ZP_12411544.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417773413|ref|ZP_12421293.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418674344|ref|ZP_13235651.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409940386|gb|EKN86026.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410576802|gb|EKQ39804.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410578764|gb|EKQ46618.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 280
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 48 NNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
N+T +N P ++ L + N L +L + L +L WL L+ N+LK+L ++ L K
Sbjct: 27 QNLTKALKN--PTDVQTLDLSNNQLITLPKEIGQLKELEWLSLSRNQLKTLPKEIEQLQK 84
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L + NQL LP +I +L L + N++T+L + L KL+ N+ NQ+T +
Sbjct: 85 LRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIETLKKLESLNLINNQLTTL 144
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L L + L NNQ+T++ + + L +L LYL +NQLT L I LK L
Sbjct: 145 PK-EIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLKNNQLT-TLPKGIVYLKELWL 202
Query: 228 VDLSYNKI 235
+DLS+N++
Sbjct: 203 LDLSFNQL 210
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 119/214 (55%), Gaps = 3/214 (1%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNN-ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRG 81
E G + + LK + TL L NN IT E + L + N L +L +
Sbjct: 22 EKGHYQNLTKALKNPTDVQTLDLSNNQLITLPKEIGQLKELEWLSLSRNQLKTLPKEIEQ 81
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L L +L+L++N+L +L ++G L +LQ L + +NQL LP +I+ +L SL NN++
Sbjct: 82 LQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIETLKKLESLNLINNQL 141
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T+L + L +LQV ++ NQ+T + +E + L L + L+NNQ+T++ + L +L
Sbjct: 142 TTLPKEIGQLKELQVLDLSNNQLTTLP-NEIEFLKRLQELYLKNNQLTTLPKGIVYLKEL 200
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS NQLT L +I LK+L+ +DLS N++
Sbjct: 201 WLLDLSFNQLTA-LSKEIGYLKKLQKLDLSRNQL 233
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L +N +T + E + +++L + N LT+L + L L L L NN+L +L +
Sbjct: 88 LYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIETLKKLESLNLINNQLTTLPKE 147
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L +LQ+L + NQL LP++I+ +L LY NN++T+L + L +L + ++ F
Sbjct: 148 IGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLKNNQLTTLPKGIVYLKELWLLDLSF 207
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQ+T + + E L L + L NQ+T++ + L KL E LDDI
Sbjct: 208 NQLTALSK-EIGYLKKLQKLDLSRNQLTTLPKEIETLKKLE----------ELFLDDIPV 256
Query: 222 LK 223
LK
Sbjct: 257 LK 258
>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 379
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 96 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 156 PQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 267
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 47 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SLY NN++T+L + L KLQ + NQ+T + + E L NL
Sbjct: 107 KTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S++L NQI ++ + L KL L L +NQLT L +I L+ L+++DLS N++
Sbjct: 166 KSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTT-LPQEIGQLQNLQSLDLSTNRL 221
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 165 LKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 225 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T+ + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 284 DLGSNQLTTFPKEIGQLKNLQVLDLGSNQLTT-LPEGIGQLKNLQTLDLDSNQL 336
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 169 NLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSN 288
Query: 163 QITMVRRD--EFQNLH--------------------NLDSISLQNNQITSMNSSLSGLTK 200
Q+T ++ + +NL NL ++ L +NQ+T++ + L
Sbjct: 289 QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQN 348
Query: 201 LAYLYLSHNQLTEFLLDDIRGL 222
L L+L++NQL+ IR L
Sbjct: 349 LQELFLNNNQLSSQEKKRIRKL 370
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 23/127 (18%)
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------------------EFQNLH 176
NR +L + L LQ N++ NQ+T++ ++ E + L
Sbjct: 58 NRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQ 117
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L S+ L NNQ+T++ + L KL +LYL NQLT L +I LK L++++LSYN+I
Sbjct: 118 KLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTT-LPQEIGQLKNLKSLNLSYNQIK 176
Query: 237 KFGTRNE 243
+ E
Sbjct: 177 TIPKKIE 183
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T + +E ++ L++ N LT+L+ + L +L L L +N+L + +
Sbjct: 237 LYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKE 296
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ+L + NQL LP I L +L ++N++T+L + L LQ ++
Sbjct: 297 IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNN 356
Query: 162 NQITMVRRDEFQNL 175
NQ++ + + L
Sbjct: 357 NQLSSQEKKRIRKL 370
>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 377
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 94 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 153
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 154 PQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 212
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 213 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 265
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 45 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SLY NN++T+L + L KLQ + NQ+T + + E L NL
Sbjct: 105 KTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S++L NQI ++ + L KL L L +NQLT L +I L+ L+++DLS N++
Sbjct: 164 KSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTT-LPQEIGQLQNLQSLDLSTNRL 219
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 163 LKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 223 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T+ + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 282 DLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTT-LPEGIGQLKNLQTLDLDSNQL 334
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 167 NLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 226
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 227 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 286
Query: 163 QITMVRRD--EFQNLH--------------------NLDSISLQNNQITSMNSSLSGLTK 200
Q+T ++ + +NL NL ++ L +NQ+T++ + L
Sbjct: 287 QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQN 346
Query: 201 LAYLYLSHNQLTEFLLDDIRGL 222
L L+L++NQL+ IR L
Sbjct: 347 LQELFLNNNQLSSQEKKRIRKL 368
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 23/127 (18%)
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------------------EFQNLH 176
NR +L + L LQ N++ NQ+T++ ++ E + L
Sbjct: 56 NRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQ 115
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L S+ L NNQ+T++ + L KL +LYL NQLT L +I LK L++++LSYN+I
Sbjct: 116 KLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTT-LPQEIGQLKNLKSLNLSYNQIK 174
Query: 237 KFGTRNE 243
+ E
Sbjct: 175 TIPKKIE 181
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T + +E ++ L++ N LT+L+ + L +L L L +N+L + +
Sbjct: 235 LYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKE 294
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ+L + NQL LP I L +L ++N++T+L + L LQ ++
Sbjct: 295 IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNN 354
Query: 162 NQITMVRRDEFQNL 175
NQ++ + + L
Sbjct: 355 NQLSSQEKKRIRKL 368
>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
2000030832]
Length = 504
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 120/224 (53%), Gaps = 22/224 (9%)
Query: 11 HAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFN 70
H + ++DL P G + LT+ P I N+ ++ E L++ N
Sbjct: 99 HPTDVRVLDLGPPEGGNKLTT-----LPKEI------GNLQNLQE---------LNLNSN 138
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ 130
T+L + L L L L++NRL +L ++G L KLQ L + QNQL+ LP +I+ +
Sbjct: 139 QFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQK 198
Query: 131 LGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L +L+ NN +T+L + L KL+ ++ N++T + + E NL NL ++L +NQ T+
Sbjct: 199 LEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPK-EIGNLQNLQELNLNSNQFTT 257
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ + L KL L L+H++LT L +I L+ L+ ++L+ N+
Sbjct: 258 LPEEIGNLQKLQKLSLAHSRLTT-LPKEIGNLQNLQELNLNSNQ 300
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ LH+G N LT+L + L +L L LN+N+ +L ++G L KLQ L + ++L L
Sbjct: 222 LEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTL 281
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N+ T+L + L KLQ +++++Q+T + + E L L +
Sbjct: 282 PKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPK-EIGKLQKLQKL 340
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL NQ+ ++ + L L L LSHN+LT L +I L+ L+ +DL N++
Sbjct: 341 SLAQNQLKTLPKEIGKLQNLKNLSLSHNELTT-LPKEIGNLQNLKELDLGGNQL 393
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + ++ LT+L + L L L L N+LK+L ++G L L+ L + N+L L
Sbjct: 314 LQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTL 373
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I L L N++T+L + L KLQ + N++ + ++
Sbjct: 374 PKEIGNLQNLKELDLGGNQLTTLPEKIGNLQKLQELFLAGNRLKTLPKEIGNLQNLQTLN 433
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
E NL +L+S++L N +TS + L KL +LYL N
Sbjct: 434 LNNNQLTTLPKEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGN 483
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N T+L + L L L LN ++L +L ++G L KLQ L + QNQL+ L
Sbjct: 291 LQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTL 350
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L ++N +T+L E NL NL +
Sbjct: 351 PKEIGKLQNLKNLSLSHNELTTLP------------------------KEIGNLQNLKEL 386
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NQ+T++ + L KL L+L+ N+L
Sbjct: 387 DLGGNQLTTLPEKIGNLQKLQELFLAGNRL 416
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L + LK P I L L N +++H P I ++L +G N LT+L +
Sbjct: 342 LAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIG 401
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L L LFL NRLK+L ++G L LQ L + NQL LP +I L SL + N
Sbjct: 402 NLQKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNS 461
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+TS + L KL+ + N + ++ Q L
Sbjct: 462 LTSFPEEIGKLQKLKWLYLGGNPFLRSQEEKIQKL 496
>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 400
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I ++L++ N L +L N + L +L L L+ N+LK+L ++G L LQ+
Sbjct: 152 AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL+ LP +I L L NNN+ ++ + L LQV ++ +NQ V +
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTV-SE 270
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L NNQ+ ++++ + L L L L+ NQLT L ++IR LK LR + L
Sbjct: 271 EIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTT-LPNEIRQLKNLRELHL 329
Query: 231 SYNKI 235
SYN++
Sbjct: 330 SYNQL 334
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L +L + L +L WL L N+L +L ++G L Q LV+ +N+L LP +
Sbjct: 74 LELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKE 133
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L LY N N+ T+ + L LQ N+ NQ+ + +E L NL + L
Sbjct: 134 IGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTL-PNEIGQLQNLRELHLS 192
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
NQ+ ++++ + L L L L+ NQL + L +I LK L+ +DL+ N+
Sbjct: 193 YNQLKTLSAEIGQLQNLQVLDLNDNQL-KTLPKEIGQLKNLQVLDLNNNQ 241
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L LNNN+L +L ++G L LQ L + NQL
Sbjct: 45 PLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I +L + NR+T+L + L L+ ++ NQ T + E L NL
Sbjct: 105 TTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ+ ++ + + L L L+LS+NQL + L +I L+ L+ +DL+ N++
Sbjct: 164 QQLNLYANQLKTLPNEIGQLQNLRELHLSYNQL-KTLSAEIGQLQNLQVLDLNDNQL 219
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ D+ L L+ +LK+L ++G L LQ+L + NQL LP +I L
Sbjct: 36 TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQ 95
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L N++T+L + L Q + N++T + + E L NL + L NQ T+
Sbjct: 96 WLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPK-EIGQLKNLRELYLNTNQFTAFP 154
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQL + L ++I L+ LR + LSYN++
Sbjct: 155 KEIGQLKNLQQLNLYANQL-KTLPNEIGQLQNLRELHLSYNQL 196
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 63/106 (59%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G+N +++ + L +L LFLNNN+LK+L ++G L LQ+L + NQL LP++
Sbjct: 258 LDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNE 317
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
I+ L L+ + N++ +L + L L+ ++ NQ+T + ++
Sbjct: 318 IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKE 363
>gi|153869391|ref|ZP_01999012.1| lipoprotein [Beggiatoa sp. PS]
gi|152074089|gb|EDN70984.1| lipoprotein [Beggiatoa sp. PS]
Length = 268
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 112/205 (54%), Gaps = 13/205 (6%)
Query: 41 ITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
I+L L N N+T PPT+ +L + N LT+L L L+ L L+L++N+
Sbjct: 19 ISLHLFNQNLT-----TLPPTLFELSHLEELGLSGNQLTTLPPELAKLSQLKVLYLSHNQ 73
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
L L + L +L+ L + NQL LPS I S+L +LY N N++T L + L +L
Sbjct: 74 LTKLPKVICRLPQLKFLYLSHNQLTTLPSQIARLSELEALYVNGNKLTVLPSTISKLAQL 133
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+V + NQ+ ++ + + L NL+ I L +N++T++ ++ L++L L+LS+NQLT
Sbjct: 134 RVLILSDNQLKILPHN-IKKLTNLEMIYLNDNRLTTLPPTICELSRLKRLFLSNNQLTR- 191
Query: 215 LLDDIRGLKRLRTVDLSYNKINKFG 239
L + L RL + + N ++ G
Sbjct: 192 LPTECYKLSRLEKLTIFENPLSLEG 216
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 98/177 (55%), Gaps = 2/177 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ NLT+L +L L+ L L L+ N+L +L +L LS+L++L + NQL LP
Sbjct: 21 LHLFNQNLTTLPPTLFELSHLEELGLSGNQLTTLPPELAKLSQLKVLYLSHNQLTKLPKV 80
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I QL LY ++N++T+L + L++L+ ++ N++T V L L + L
Sbjct: 81 ICRLPQLKFLYLSHNQLTTLPSQIARLSELEALYVNGNKLT-VLPSTISKLAQLRVLILS 139
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+NQ+ + ++ LT L +YL+ N+LT L I L RL+ + LS N++ + T
Sbjct: 140 DNQLKILPHNIKKLTNLEMIYLNDNRLTT-LPPTICELSRLKRLFLSNNQLTRLPTE 195
>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 557
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ N L+ L + L L WL L NNRL+SL ++G L KL+ L +E NQL L
Sbjct: 63 LEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVL 122
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I +L L NNR+ SL + L KL+ N++ NQ+ ++ + E L L+ +
Sbjct: 123 VQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQ-EIGTLQKLEWL 181
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+NN++ S+ + + L KL +L L HNQL L+ +I L++L + L N++
Sbjct: 182 SLKNNRLESLPNKIGKLRKLEHLNLEHNQLA-VLVQEIGTLQKLEWLSLENNQL 234
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L +L N + L +L WL+L++N+L L ++G L L+ L++ NQL LP +
Sbjct: 319 LDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQE 378
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +L L +NN++ +L + L +L+ N++ NQ+ + + E L NL+ + L
Sbjct: 379 IGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQ-EIDQLQNLEDLILS 437
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NN++ ++ + L KL +LYL +N+L L +I L+ L +DLS N++
Sbjct: 438 NNRLKTLPKEIWKLRKLEWLYLKNNKLGS-LPKEIDQLQNLEYLDLSNNQL 487
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L SL + L L +L L NNRLK+L ++ L L+ L + NQ LP +I
Sbjct: 255 NKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQ 314
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L +NN++ +L + L L+ +D NQ+T++ + E L NL+S+ L NNQ+T
Sbjct: 315 NLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQ-EIGQLENLESLILSNNQLT 373
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ + L KL YL LS+NQL L +I L+ L ++L +N++
Sbjct: 374 TLPQEIGTLQKLQYLNLSNNQL-RTLPQEIGTLQELEWLNLEHNQL 418
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L L +L L+NN+L++L ++GTL +L+ L +E NQL ALP +I
Sbjct: 370 NQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQ 429
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L +NNR+ +L + L KL+ + N++ + + E L NL+ + L NNQ+
Sbjct: 430 NLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPK-EIDQLQNLEYLDLSNNQLR 488
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEF 214
++ + + L L L LS N F
Sbjct: 489 TLPNEIGQLQSLEDLDLSGNPFATF 513
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L L + L L WL L NNRL+SL ++G L KL+ L +E NQL L +
Sbjct: 158 LNLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQE 217
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +L L NN++T L + L KL+V + N++ + + E L L +SL
Sbjct: 218 IGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQ-EIGTLRRLRFLSLV 276
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NN++ ++ + L L LYL NQ L +I L+ L +D+S N++
Sbjct: 277 NNRLKTLPREIWKLQNLKDLYLGDNQF-RTLPKEIDQLQNLEGLDVSNNQL 326
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L SL N + L L L L +N+L L ++GTL KL+ L ++ N+LE+LP+ I
Sbjct: 140 NRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLR 199
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L +N++ L + L KL+ +++ NQ+T++ + E L L+ + L+NN++
Sbjct: 200 KLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQ-EIGKLQKLEVLCLKNNKLG 258
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
S+ + L +L +L L +N+L + L +I L+ L+ + L N+
Sbjct: 259 SLPQEIGTLRRLRFLSLVNNRL-KTLPREIWKLQNLKDLYLGDNQ 302
>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 469
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I ++L++ N L +L N + L +L L L+ N+LK+L ++G L LQ+
Sbjct: 221 AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 280
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL+ LP +I L L NNN+ ++ + L LQV ++ +NQ V +
Sbjct: 281 LDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTV-SE 339
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L NNQ+ ++++ + L L L L+ NQLT L ++IR LK LR + L
Sbjct: 340 EIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTT-LPNEIRQLKNLRELHL 398
Query: 231 SYNKI 235
SYN++
Sbjct: 399 SYNQL 403
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L LNNN+L +L ++G L LQ+L + NQL
Sbjct: 45 PLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L NNN++ +L + L LQV ++ NQ+ + + E L NL
Sbjct: 105 ATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++L NQ+T++ + L L LS N+LT L +I LK LR + L+ N+ F
Sbjct: 164 QWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTT-LPKEIGQLKNLRELYLNTNQFTAF 222
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ D+ L L+ +LK+L ++G L LQ+L + NQL LP +I L
Sbjct: 36 TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQ 95
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L NNN++ +L + L LQV ++ NQ+ + + E L NL + L NNQ+ ++
Sbjct: 96 VLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPK-EIGQLKNLQVLELNNNQLATLP 154
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L +L L NQLT L ++I L+ +T+ LS N++
Sbjct: 155 KEIGQLKNLQWLNLVTNQLTT-LPEEIGQLQNFQTLVLSKNRL 196
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L +L + L +L WL L N+L +L ++G L Q LV+ +N+L LP +
Sbjct: 143 LELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKE 202
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L LY N N+ T+ + L LQ N+ NQ+ + +E L NL + L
Sbjct: 203 IGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTL-PNEIGQLQNLRELHLS 261
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
NQ+ ++++ + L L L L+ NQL + L +I LK L+ +DL+ N+
Sbjct: 262 YNQLKTLSAEIGQLQNLQVLDLNDNQL-KTLPKEIGQLKNLQVLDLNNNQ 310
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 63/106 (59%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G+N +++ + L +L LFLNNN+LK+L ++G L LQ+L + NQL LP++
Sbjct: 327 LDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNE 386
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
I+ L L+ + N++ +L + L L+ ++ NQ+T + ++
Sbjct: 387 IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKE 432
>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 377
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 94 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 153
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 154 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 212
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 213 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 265
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 45 PLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SLY NN++T+L + L KLQ + NQ+T + + E L NL
Sbjct: 105 KTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S++L NQI ++ + L KL L L +NQLT L +I L+ L+++DLS N++
Sbjct: 164 KSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTT-LPQEIGQLQNLQSLDLSTNRL 219
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 163 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 223 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T+ + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 282 DLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTT-LPEGIGQLKNLQTLDLDSNQL 334
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 167 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 226
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 227 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 286
Query: 163 QITMVRRD--EFQNLH--------------------NLDSISLQNNQITSMNSSLSGLTK 200
Q+T ++ + +NL NL ++ L +NQ+T++ + L
Sbjct: 287 QLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQN 346
Query: 201 LAYLYLSHNQLTEFLLDDIRGL 222
L L+L++NQL+ IR L
Sbjct: 347 LQELFLNNNQLSSQEKKRIRKL 368
>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 380
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 97 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 157 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 216 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 268
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 48 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 107
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SLY NN++T+L + L KLQ + NQ+T + + E L NL
Sbjct: 108 KTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNL 166
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S++L NQI ++ + L KL L L +NQLT L +I L+ L+++DLS N++
Sbjct: 167 KSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLT-TLPQEIGQLQNLQSLDLSTNRL 222
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 166 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 226 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 284
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 285 DLRSNQLTIFPKEIGQLKNLQVLDLGSNQLT-TLPEGIGQLKNLQTLDLDSNQL 337
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 170 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 229
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 230 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 289
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T+ + E L NL + L +NQ+T++ + L L L L NQLT L +I L
Sbjct: 290 QLTIFPK-EIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLT-TLPQEIGQL 347
Query: 223 KRLRTVDLSYNKI 235
+ L+ + L+ N++
Sbjct: 348 QNLQELFLNNNQL 360
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L +N+L ++G L LQ+L + NQL L
Sbjct: 258 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 317
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P I L +L ++N++T+L + L LQ ++ NQ++ + + L
Sbjct: 318 PEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSSQEKKRIRKL 371
>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 539
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+G N T+L ++ L +L WL L++NR +L ++G L KLQ L + NQL L
Sbjct: 229 LKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTL 288
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N++T+L + L LQ + NQ+T + + E L +L S+
Sbjct: 289 PKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPK-EIGKLQSLQSL 347
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L L L L NQLT + +I L+ L+ + LS+N++
Sbjct: 348 TLWGNQLTTLPKEIGKLQSLQELILGKNQLTT-IPKEIWQLQYLQRLSLSFNQL 400
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L + N LT+L + L L L L N+L ++ ++G L LQ L + NQL
Sbjct: 297 SLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTT 356
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L L N++T++ + L LQ ++ FNQ+T + + E + L NL
Sbjct: 357 LPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPK-EIEKLQNLQK 415
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L+NNQ+T++ + L KL L L +NQLT L ++I L+ L+ + L+ NK+
Sbjct: 416 LHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTA-LPEEIGKLQNLKDLYLNNNKL 469
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L+L N +T I E +++ L + N LT+L + L L L L N+L +
Sbjct: 320 SLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTT 379
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++ L LQ L + NQL A+P +I+ L L+ NN++T+L + L KLQ
Sbjct: 380 IPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQEL 439
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ +NQ+T + +E L NL + L NN++T++ + L KL LYL++N+LT L
Sbjct: 440 DLGYNQLTAL-PEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNKLTT-LPK 497
Query: 218 DIRGLKRLRTVDLSYN 233
+I L++L+ + L+ N
Sbjct: 498 EIEKLQKLKNLHLADN 513
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N T+L + L L L L N+L +L ++G L KL+ L ++ NQ L
Sbjct: 160 LQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTL 219
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L+ +NR T+L ++ L LQ N+D N+ T + + E NL L +
Sbjct: 220 PKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPK-EIGNLQKLQKL 278
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL +NQ+T++ + L L L L NQLT L +I L+ L+ + L N++
Sbjct: 279 SLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTT-LPKEIGKLQSLQELILGKNQL 331
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L +L L LN+N+ +L ++ L KLQ L + +NQL L
Sbjct: 137 LRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTL 196
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L+ + N+ T+L + L KL+ ++ N+ T + + E + L NL +
Sbjct: 197 PEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPK-EIKKLQNLQWL 255
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +N+ T++ + L KL L L+HNQLT L +I L+ L+ + L N++
Sbjct: 256 NLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTT-LPKEIGKLQSLQRLTLWGNQL 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 57 AFPPTIRKLHVG-FNNLTSLNNSLRGLTDLNWLFL-------NNNRLKSLEGQLGTLSKL 108
F TI G + NLT +L+ TD+ +L+L +N+ L +L ++G L L
Sbjct: 81 CFCCTIEAKEKGVYYNLTE---ALQHPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNL 137
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L + NQL LP +I L L N+N+ T+L + L KLQ ++ NQ+T +
Sbjct: 138 RDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTL- 196
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+E L L + L NQ T++ + L KL L+L N+ T L +I+ L+ L+ +
Sbjct: 197 PEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTT-LPKEIKKLQNLQWL 255
Query: 229 DLSYNK 234
+L N+
Sbjct: 256 NLDSNR 261
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L L++N+L +L ++G L LQ L + NQ LP +I +L
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKL 183
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L N++T+L + L KL+ ++D NQ T + + E L L + L +N+ T++
Sbjct: 184 QKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPK-EIGKLQKLKELHLGSNRFTTL 242
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L +L L N+ T L +I L++L+ + L++N++
Sbjct: 243 PKEIKKLQNLQWLNLDSNRFTT-LPKEIGNLQKLQKLSLAHNQL 285
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 62/114 (54%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KLH+ N LT+L + L L L L N+L +L ++G L L+ L + N+L L
Sbjct: 413 LQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTTL 472
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I +L LY NNN++T+L + L KL+ ++ N ++++ Q L
Sbjct: 473 PKEIGKLQKLKDLYLNNNKLTTLPKEIEKLQKLKNLHLADNPFLRSQKEKIQKL 526
>gi|320164980|gb|EFW41879.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 769
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRL 95
AL+ + L +N IT + +AF T+++LH+ N LTS++ + GLT L L+L N++
Sbjct: 67 ALVAVYLQDNQITAVPASAFAGMTTLKQLHLANNQLTSISTGTFAGLTSLVSLYLAGNQI 126
Query: 96 KSLE-GQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDG-LLRGLT 152
++ L++L L + NQ+ +P S S + L NNN+IT L GLT
Sbjct: 127 TTIPLNAFVDLTQLVGLELNNNQITDIPASSFTGLSGMKRLTLNNNQITILSANAFTGLT 186
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQL 211
L + N IT + + F L L + LQ NQITS+ S S +GL+ L +L LS N++
Sbjct: 187 ALTELYLSSNTITSISANAFTGLSALTMVELQFNQITSIASNSFTGLSSLIFLGLSSNRI 246
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
T + GL +L ++ L N+I
Sbjct: 247 TSISDNAFTGLTQLVSLTLFSNQI 270
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+++ G +L++L L N IT I NAF LT L L
Sbjct: 105 ISTGTFAGLTSLVSLYLAGNQITTIPLNAFV---------------------DLTQLVGL 143
Query: 89 FLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG 146
LNNN++ + T LS ++ L + NQ+ L ++ + L LY ++N ITS+
Sbjct: 144 ELNNNQITDIPASSFTGLSGMKRLTLNNNQITILSANAFTGLTALTELYLSSNTITSISA 203
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 204
GL+ L + + FNQIT + + F L +L + L +N+ITS+ +++ +GLT+L L
Sbjct: 204 NAFTGLSALTMVELQFNQITSIASNSFTGLSSLIFLGLSSNRITSISDNAFTGLTQLVSL 263
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L NQ+T + G+ L + L+ N
Sbjct: 264 TLFSNQITSISASALTGMPVLLQLTLTGN 292
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 12/181 (6%)
Query: 67 VGFNNLTSLNNSLRGLTDL--------NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQ 117
V F +++N R LT++ L L +N++ SL +L+ L + ++ NQ
Sbjct: 18 VCFCGGSTVNCQSRNLTEIPSEIPVGTTSLSLYDNQITSLPASAFTSLTALVAVYLQDNQ 77
Query: 118 LEALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+ A+P S + L L+ NN++TS+ G GLT L + NQIT + + F +L
Sbjct: 78 ITAVPASAFAGMTTLKQLHLANNQLTSISTGTFAGLTSLVSLYLAGNQITTIPLNAFVDL 137
Query: 176 HNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L + L NNQIT + SS +GL+ + L L++NQ+T + GL L + LS N
Sbjct: 138 TQLVGLELNNNQITDIPASSFTGLSGMKRLTLNNNQITILSANAFTGLTALTELYLSSNT 197
Query: 235 I 235
I
Sbjct: 198 I 198
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 19/190 (10%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLK 96
L+ L L NN IT I ++F +++L + N +T L+ N+ GLT L L+L++N +
Sbjct: 140 LVGLELNNNQITDIPASSFTGLSGMKRLTLNNNQITILSANAFTGLTALTELYLSSNTIT 199
Query: 97 SLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---ANNNRITSL-DGLLRGL 151
S+ T LS L ++ ++ NQ+ ++ S+ F+ L SL ++NRITS+ D GL
Sbjct: 200 SISANAFTGLSALTMVELQFNQITSIASNS--FTGLSSLIFLGLSSNRITSISDNAFTGL 257
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYL------ 204
T+L + NQIT + + L ++L N T++ L G+ YL
Sbjct: 258 TQLVSLTLFSNQITSISASALTGMPVLLQLTLTGNPFTTLPPGLFQGMQNDMYLTYDGQF 317
Query: 205 --YLSHNQLT 212
YL+ N T
Sbjct: 318 FQYLAPNNFT 327
>gi|418703173|ref|ZP_13264063.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418714227|ref|ZP_13274787.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|421127504|ref|ZP_15587728.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421134109|ref|ZP_15594251.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410021847|gb|EKO88630.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410435594|gb|EKP84726.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410767237|gb|EKR37914.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410789170|gb|EKR82872.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|456968636|gb|EMG09806.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 283
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 3/214 (1%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNN-ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRG 81
E G + + LK + TL L NN IT E + L + N L +L +
Sbjct: 25 EKGHYQNLTKALKNPTDVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQ 84
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L L +L+LN+N+L +L ++G L +LQ L + +NQL LP +I+ L SL NN++
Sbjct: 85 LQKLRYLYLNDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQL 144
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T+L + L +LQV ++ NQ+T + +E + L L + L+NNQ+T++ + L +L
Sbjct: 145 TTLPKEIGQLKELQVLDLSNNQLTTL-PNEIEFLKRLQELYLRNNQLTTLPKGIGYLKEL 203
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS NQLT L I LK+L+ +DLS N++
Sbjct: 204 WLLDLSFNQLTA-LSKGIGYLKKLQKLDLSRNQL 236
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 29 LTSDDLKGTPALIT-------LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
L+ + LK P I L L +N +T + E + +++L + N LT+L +
Sbjct: 70 LSKNQLKTLPKEIEQLQKLRYLYLNDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIE 129
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L DL L L NN+L +L ++G L +LQ+L + NQL LP++I+ +L LY NN+
Sbjct: 130 YLKDLESLNLINNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQ 189
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+T+L + L +L + ++ FNQ+T + + L L + L NQ+T++ + L K
Sbjct: 190 LTTLPKGIGYLKELWLLDLSFNQLTALSKG-IGYLKKLQKLDLSRNQLTTLPKEIETLKK 248
Query: 201 LAYLYLSHNQLTEFLLDDIRGLK 223
L E LDDI LK
Sbjct: 249 LE----------ELFLDDIPVLK 261
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 45 LVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L+NN +T + E ++ L + N LT+L N + L L L+L NN+L +L +G
Sbjct: 139 LINNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIG 198
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L +L LL + NQL AL I +L L + N++T+L + L KL+ +D
Sbjct: 199 YLKELWLLDLSFNQLTALSKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIP 258
Query: 164 ITMVRRDEFQNL 175
+ + + Q L
Sbjct: 259 VLKSQEKKIQKL 270
>gi|418709844|ref|ZP_13270630.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418727665|ref|ZP_13286253.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409959023|gb|EKO22800.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|410770079|gb|EKR45306.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 280
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 3/214 (1%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNN-ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRG 81
E G + + LK + TL L NN IT E + L + N L +L +
Sbjct: 22 EKGHYQNLTKALKNPTDVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQ 81
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L L +L+LN+N+L +L ++G L +LQ L + +NQL LP +I+ L SL NN++
Sbjct: 82 LQKLRYLYLNDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQL 141
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T+L + L +LQV ++ NQ+T + +E + L L + L+NNQ+T++ + L +L
Sbjct: 142 TTLPKEIGQLKELQVLDLSNNQLTTL-PNEIEFLKRLQELYLRNNQLTTLPKGIGYLKEL 200
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS NQLT L I LK+L+ +DLS N++
Sbjct: 201 WLLDLSFNQLTA-LSKGIGYLKKLQKLDLSRNQL 233
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 29 LTSDDLKGTPALIT-------LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
L+ + LK P I L L +N +T + E + +++L + N LT+L +
Sbjct: 67 LSKNQLKTLPKEIEQLQKLRYLYLNDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIE 126
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L DL L L NN+L +L ++G L +LQ+L + NQL LP++I+ +L LY NN+
Sbjct: 127 YLKDLESLNLINNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQ 186
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+T+L + L +L + ++ FNQ+T + + L L + L NQ+T++ + L K
Sbjct: 187 LTTLPKGIGYLKELWLLDLSFNQLTALSKG-IGYLKKLQKLDLSRNQLTTLPKEIETLKK 245
Query: 201 LAYLYLSHNQLTEFLLDDIRGLK 223
L E LDDI LK
Sbjct: 246 LE----------ELFLDDIPVLK 258
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 45 LVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L+NN +T + E ++ L + N LT+L N + L L L+L NN+L +L +G
Sbjct: 136 LINNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIG 195
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L +L LL + NQL AL I +L L + N++T+L + L KL+ +D
Sbjct: 196 YLKELWLLDLSFNQLTALSKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIP 255
Query: 164 ITMVRRDEFQNL 175
+ + + Q L
Sbjct: 256 VLKSQEKKIQKL 267
>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
Length = 394
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 102/178 (57%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+RKL++G N LTS+ + LT L L L+ N+L S+ ++G L+ L++L +E NQL +
Sbjct: 51 ALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLESNQLTS 110
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L Y + N++TSL + LT L+ ++ NQ+T V + +Q + L++
Sbjct: 111 VPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAEIWQ-ITALEA 169
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NQ+TS+ + + LT L L L NQLT + DI L L + L N++
Sbjct: 170 LWLNENQLTSLPAEIGQLTSLKELGLGGNQLTS-VPADIGQLTLLEGLSLDSNQLTSV 226
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++ N LTS+ + L L +L+ N+L SL ++G L+ L+ L + +NQL +
Sbjct: 97 SLEVLYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTS 156
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L +L+ N N++TSL + LT L+ + NQ+T V D Q L L+
Sbjct: 157 VPAEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPADIGQ-LTLLEG 215
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+SL +NQ+TS+ + + L L +L+L NQL + +I L L ++L N++
Sbjct: 216 LSLDSNQLTSVPAEIGQLASLKFLHLQGNQLAS-VPAEIGQLTLLEGLNLESNQLTSV 272
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L +G N LTS+ + LT L L L++N+L S+ ++G L+ L+ L ++ NQL +
Sbjct: 189 SLKELGLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQLAS 248
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L +N++TS+ + L L+ + NQ+T V E L +LD
Sbjct: 249 VPAEIGQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSVP-AEIGQLSSLDG 307
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
++L+ NQ+TS+ + + L L L+LS+NQLT
Sbjct: 308 LNLERNQLTSVPAEIGQLASLKLLHLSYNQLT 339
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 10/218 (4%)
Query: 29 LTSDDLKGTPALI---TLL----LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLR 80
L+ + L PA I TLL L N +T + + T + L + N LTSL +
Sbjct: 126 LSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIG 185
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT L L L N+L S+ +G L+ L+ L ++ NQL ++P++I + L L+ N+
Sbjct: 186 QLTSLKELGLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQ 245
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+ S+ + LT L+ N++ NQ+T V E L +L + L NQ+TS+ + + L+
Sbjct: 246 LASVPAEIGQLTLLEGLNLESNQLTSV-PAEIGQLASLKRLILSRNQLTSVPAEIGQLSS 304
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L L NQLT + +I L L+ + LSYN++
Sbjct: 305 LDGLNLERNQLTS-VPAEIGQLASLKLLHLSYNQLTSV 341
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L + N LTS+ + L L +L L N+L S+ ++G L+ L+ L +E NQL ++
Sbjct: 213 LEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQLASVPAEIGQLTLLEGLNLESNQLTSV 272
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I + L L + N++TS+ + L+ L N++ NQ+T V E L +L +
Sbjct: 273 PAEIGQLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQLTSVP-AEIGQLASLKLL 331
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L NQ+TS+ + + L L +L+L++N+LT
Sbjct: 332 HLSYNQLTSVPAEIWQLASLEWLWLNNNELT 362
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ LH+ N L S+ + LT L L L +N+L S+ ++G L+ L+ L++ +NQL +
Sbjct: 235 SLKFLHLQGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTS 294
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I S L L N++TS+ + L L++ ++ +NQ+T V + +Q L +L+
Sbjct: 295 VPAEIGQLSSLDGLNLERNQLTSVPAEIGQLASLKLLHLSYNQLTSVPAEIWQ-LASLEW 353
Query: 181 ISLQNNQITSMNSSL 195
+ L NN++TS+ +++
Sbjct: 354 LWLNNNELTSVPAAI 368
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ +LG LS L+ L + +NQL ++P++I + L L + N++TS+ + LT L+V
Sbjct: 41 AVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEV 100
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
++ NQ+T V E L +L+ L NQ+TS+ + + LT L L L+ NQLT +
Sbjct: 101 LYLESNQLTSV-PAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTS-VP 158
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+I + L + L+ N++
Sbjct: 159 AEIWQITALEALWLNENQLTSL 180
>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 391
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 96 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+
Sbjct: 156 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 267
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 47 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SLY NN++T+L + L KLQ + NQ+T + + E L NL
Sbjct: 107 KTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S++L NQI ++ + L KL L L +NQLT L +I L+ L+++DLS N++
Sbjct: 166 KSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTT-LPQEIGQLQNLQSLDLSTNRL 221
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 165 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 225 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 284 DLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTT-LPEGIGQLKNLQTLDLDSNQL 336
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 169 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 228
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 229 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 288
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T+ + E L NL + L +NQ+T++ + L L L L NQLT L +I L
Sbjct: 289 QLTIFPK-EIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT-LPQEIGQL 346
Query: 223 KRLRTVDLSYNKI 235
+ L+ + L+ N++
Sbjct: 347 QNLQELFLNNNQL 359
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T + +E ++ L++ N LT+L+ + L +L L L +N+L +
Sbjct: 237 LYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE 296
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ+L + NQL LP I L +L ++N++T+L + L LQ ++
Sbjct: 297 IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNN 356
Query: 162 NQITMVRRDEFQN 174
NQ++ + EF+N
Sbjct: 357 NQLSSQEKKEFEN 369
>gi|320170295|gb|EFW47194.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 785
Score = 87.8 bits (216), Expect = 4e-15, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
L S+ PAL + + N IT I +AF + ++ + +N L S+ ++L GLT L
Sbjct: 55 LDSNAFAHLPALAVIAVSYNQITSIAADAFAGLSQLTQIIMHYNKLVSIPTDALAGLTLL 114
Query: 86 NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRITS 143
+ L L +N + S+ + L L + NQ+ + LP + L L N+NR+TS
Sbjct: 115 SNLNLASNLITSISANAFAGMVALADLAVGGNQITSILPGAFATLTALTKLQVNSNRLTS 174
Query: 144 L--DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK 200
+ D + GLT LQ + NQIT + + F L +L ++ L NN ITS++ + GLT
Sbjct: 175 VPADAFI-GLTSLQHLTFNINQITSISANAFPGLTSLLTLFLNNNAITSVSGRAFEGLTA 233
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L YL L NQ+T GL +R + L+ N+I
Sbjct: 234 LTYLTLERNQITSIPPAGFTGLPAIRILTLNENQITSL 271
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTS-LNNSLRGLTDL 85
+ +D L G L L L +N IT I NAF + L VG N +TS L + LT L
Sbjct: 103 IPTDALAGLTLLSNLNLASNLITSISANAFAGMVALADLAVGGNQITSILPGAFATLTAL 162
Query: 86 NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L +N+NRL S+ L+ LQ L NQ+ ++ ++ + L +L+ NNN ITS
Sbjct: 163 TKLQVNSNRLTSVPADAFIGLTSLQHLTFNINQITSISANAFPGLTSLLTLFLNNNAITS 222
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKL 201
+ G GLT L ++ NQIT + F L + ++L NQITS+ ++ + +T L
Sbjct: 223 VSGRAFEGLTALTYLTLERNQITSIPPAGFTGLPAIRILTLNENQITSLPPNAFTAMTTL 282
Query: 202 AYLYLSHNQLTEFLLDDIRGLK 223
L L+ N +T +GLK
Sbjct: 283 TSLPLNANPMTTLPPGLFKGLK 304
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 57 AFPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIE 114
A P L + N LTSL+ N+ L L + ++ N++ S+ LS+L +++
Sbjct: 37 AIPANTTYLSLYGNLLTSLDSNAFAHLPALAVIAVSYNQITSIAADAFAGLSQLTQIIMH 96
Query: 115 QNQLEALPSD-IQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEF 172
N+L ++P+D + + L +L +N ITS+ G+ L + NQIT + F
Sbjct: 97 YNKLVSIPTDALAGLTLLSNLNLASNLITSISANAFAGMVALADLAVGGNQITSILPGAF 156
Query: 173 QNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L L + + +N++TS+ + + GLT L +L + NQ+T + GL L T+ L+
Sbjct: 157 ATLTALTKLQVNSNRLTSVPADAFIGLTSLQHLTFNINQITSISANAFPGLTSLLTLFLN 216
Query: 232 YNKINKFGTR 241
N I R
Sbjct: 217 NNAITSVSGR 226
>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 558
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L +L + L L WL L NN+LKSL ++G L L+ L++E N+LE+ P +
Sbjct: 274 LYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENNRLESFPKE 333
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I S L L+ N T+L + L +L N++ NQ+T + + E L L+ ++L
Sbjct: 334 IGTLSNLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQLTTLPQ-EIGRLERLEWLNLY 392
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NN++ ++ + L KL +LYL++NQL L +I L+ L +DL YN++
Sbjct: 393 NNRLATLPKEIGTLRKLQHLYLANNQLA-TLPKEIGQLQNLEDLDLEYNQL 442
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++G N LT++ + L DL L L NN+L +L ++GTL L+ L + NQL L
Sbjct: 110 LERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTL 169
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I L L NN++ +L + L L+ + +NQ+T + ++
Sbjct: 170 PKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLN 229
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL S++L+NN++ ++ + L KL +LYL++NQL L +I
Sbjct: 230 VFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLA-TLPKEI 288
Query: 220 RGLKRLRTVDLSYNKI 235
L+RL + L+ N++
Sbjct: 289 GKLQRLEWLGLANNQL 304
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LT+L + L L WL+L+ N+L +L ++G L +L+ L + NQL +P +
Sbjct: 67 LYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQE 126
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L NN++ +L + L L+ N+ NQ+ + + E L +L +++
Sbjct: 127 IGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPK-EIGTLQHLQDLNVF 185
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLT 212
NNQ+ ++ + L L YL L++NQLT
Sbjct: 186 NNQLITLPQEIGTLQNLKYLRLAYNQLT 213
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 34/196 (17%)
Query: 52 HIHENAF---PPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
H+ N F P I LH + N LT+L + L L WL L NNRL +L ++
Sbjct: 344 HLEYNGFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEI 403
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
GTL KLQ L + NQL LP +I G L+ L L ++++N
Sbjct: 404 GTLRKLQHLYLANNQLATLPKEI--------------------GQLQNLEDL---DLEYN 440
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+ + + L L+ +SL+NNQ+T++ + L K+ L L++NQL L +I L
Sbjct: 441 QLATL-PEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQL-RTLPQEIGQL 498
Query: 223 KRLRTVDLSYNKINKF 238
+ L+ +DLS N F
Sbjct: 499 QNLKDLDLSGNPFTTF 514
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT+L + L +L L + NN+L +L ++GTL LQ L +E N+L L
Sbjct: 202 LKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITL 261
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY NN++ +L + L +L+ + NQ+ + + E L NL +
Sbjct: 262 PKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQ-EIGKLQNLKEL 320
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NN++ S + L+ L L+L +N T L +I L RL ++L +N++
Sbjct: 321 ILENNRLESFPKEIGTLSNLQRLHLEYNGFT-TLPQEIGTLHRLPWLNLEHNQL 373
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N L +L + L L L + NN+L +L ++GTL L+ L + NQL L
Sbjct: 156 LEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTL 215
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN++ +L + L LQ N++ N++ + + E L L+ +
Sbjct: 216 PKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPK-EIGTLQKLEWL 274
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NNQ+ ++ + L +L +L L++NQL L +I L+ L+ + L N++ F
Sbjct: 275 YLTNNQLATLPKEIGKLQRLEWLGLANNQLKS-LPQEIGKLQNLKELILENNRLESF 330
>gi|320169763|gb|EFW46662.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 684
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 118/241 (48%), Gaps = 31/241 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+ S+ G AL L L NNNIT I +AF + L + N +TSL+ N+ GLT+L
Sbjct: 144 IASNTFTGLTALTRLSLFNNNITSIPASAFADLSALTYLDLAGNQMTSLSANAFIGLTEL 203
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITS 143
+L L +N + S+ T L+ L LV+E N + ++ + D + L L NN+ITS
Sbjct: 204 TYLSLTSNEITSISPAAFTGLTALTELVLENNLIASISANDFAGLTSLNLLRMRNNQITS 263
Query: 144 LDG-------------------------LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L GLT L + ++ NQIT + + F L +L
Sbjct: 264 LSANGFAGLPSLTELDLDLNLMTSIDASAFAGLTSLNLLSVQNNQITSISANGFAGLPSL 323
Query: 179 DSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
++ L++NQITS+++ + +GLT L +L L NQ+T + + L + L +N+I
Sbjct: 324 TALGLESNQITSISANAFAGLTSLNFLRLEGNQITSISANAFAAVTSLSVLSLHFNQITS 383
Query: 238 F 238
F
Sbjct: 384 F 384
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 113/240 (47%), Gaps = 31/240 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAF-------------------PPT-------I 62
+++ G P L L L +N IT+I N F P + +
Sbjct: 120 ISASAFAGLPVLEVLSLNDNQITNIASNTFTGLTALTRLSLFNNNITSIPASAFADLSAL 179
Query: 63 RKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEA 120
L + N +TSL+ N+ GLT+L +L L +N + S+ T L+ L LV+E N + +
Sbjct: 180 TYLDLAGNQMTSLSANAFIGLTELTYLSLTSNEITSISPAAFTGLTALTELVLENNLIAS 239
Query: 121 LPS-DIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ + D + L L NN+ITSL GL L ++D N +T + F L +L
Sbjct: 240 ISANDFAGLTSLNLLRMRNNQITSLSANGFAGLPSLTELDLDLNLMTSIDASAFAGLTSL 299
Query: 179 DSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ +S+QNNQITS+++ +GL L L L NQ+T + GL L + L N+I
Sbjct: 300 NLLSVQNNQITSISANGFAGLPSLTALGLESNQITSISANAFAGLTSLNFLRLEGNQITS 359
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 27/200 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDL 85
++++D G +L L + NN IT + N F P++ +L + N +TS++ S GLT L
Sbjct: 240 ISANDFAGLTSLNLLRMRNNQITSLSANGFAGLPSLTELDLDLNLMTSIDASAFAGLTSL 299
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
N L + NN++ S I N LPS L +L +N+ITS+
Sbjct: 300 NLLSVQNNQITS---------------ISANGFAGLPS-------LTALGLESNQITSIS 337
Query: 146 G-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 203
GLT L ++ NQIT + + F + +L +SL NQITS ++ + +GLT + Y
Sbjct: 338 ANAFAGLTSLNFLRLEGNQITSISANAFAAVTSLSVLSLHFNQITSFSANAFTGLTTMMY 397
Query: 204 LYLSHNQLTEFLLDDIRGLK 223
L L+ N T +GL+
Sbjct: 398 LLLNSNPFTTLPPGLFQGLQ 417
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 9/190 (4%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLV 112
+ P T L + N TS+ N+ GLT LN LFL+NN + S+ L+ L L
Sbjct: 28 PDGIPVTTTDLRLHLNLFTSVAANAFSGLTALNSLFLSNNPITSIAVNAFSGLTALTQLS 87
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL----LRGLTKLQVFNMDFNQITMVR 168
+ N L +P + F+ L +L + +T + + GL L+V +++ NQIT +
Sbjct: 88 LAGNPLTTIPDNT--FTGLTALTRLDVYVTQIASISASAFAGLPVLEVLSLNDNQITNIA 145
Query: 169 RDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ F L L +SL NN ITS+ S+ + L+ L YL L+ NQ+T + GL L
Sbjct: 146 SNTFTGLTALTRLSLFNNNITSIPASAFADLSALTYLDLAGNQMTSLSANAFIGLTELTY 205
Query: 228 VDLSYNKINK 237
+ L+ N+I
Sbjct: 206 LSLTSNEITS 215
Score = 36.6 bits (83), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYL 206
GLT L + N IT + + F L L +SL N +T++ +++ +GLT L L +
Sbjct: 53 FSGLTALNSLFLSNNPITSIAVNAFSGLTALTQLSLAGNPLTTIPDNTFTGLTALTRLDV 112
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
Q+ GL L + L+ N+I +
Sbjct: 113 YVTQIASISASAFAGLPVLEVLSLNDNQITNIAS 146
>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
Length = 412
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 3/201 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ALI L L N +T + E T + LH+G N LTSL + LT L L L N+L +
Sbjct: 98 ALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQLTN 157
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ L L + +NQL +P++ + LG LY ++NR+TS+ + LT L
Sbjct: 158 VPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWL 217
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQ+T V E L +L+ + L +NQ+TS+ + + L L L LS NQLT L
Sbjct: 218 GLYGNQLTSVPA-EIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPL- 275
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L + + LSYN++
Sbjct: 276 EIGQLTAMTELYLSYNQLTSL 296
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 116/221 (52%), Gaps = 10/221 (4%)
Query: 29 LTSDDLKGTPA-------LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLR 80
LT + L PA L+ L L N +T++ + T + +L++ N LTS+ +
Sbjct: 150 LTENQLTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIG 209
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT L WL L N+L S+ ++G L+ L+LL + NQL ++P++I+ L L + N+
Sbjct: 210 QLTSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQ 269
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+TS+ + LT + + +NQ+T + E L +L+ + L +N++TS+ + + LT
Sbjct: 270 LTSVPLEIGQLTAMTELYLSYNQLTSLPA-EIGQLTSLEKLYLGDNRLTSVPAEIGQLTS 328
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L LYL+ NQLT + +I L L L N++ T
Sbjct: 329 LWGLYLNDNQLTS-VPAEIGQLTSLEIFQLERNQLTSLPTE 368
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 7 FEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKL 65
E+G V L L D TG+ P L AL L + N +T + E ++R+L
Sbjct: 1 MENGRVVELALADCG-LTGAVPAEVGRLT---ALRELNVARNALTLLPAEIGQLTSLREL 56
Query: 66 HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
+ N LTS+ + LT L L+L+ NRL S+ ++G + L L + N+L ++P +I
Sbjct: 57 CLTGNQLTSVPADIGQLTSLERLWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEI 116
Query: 126 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+ L L+ +N++TSL + LT L N+ NQ+T V E L +L ++L
Sbjct: 117 GQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQLTNVPA-EIGQLTSLVKLNLTK 175
Query: 186 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
NQ+T++ + LT L LYL N+LT D
Sbjct: 176 NQLTNVPAEFWRLTSLGELYLDDNRLTSVPAD 207
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N LTS+ +R L L L L+ N+L S+ ++G L+ + L + NQL +LP++
Sbjct: 240 LRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSYNQLTSLPAE 299
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L LY +NR+TS+ + LT L ++ NQ+T V E L +L+ L+
Sbjct: 300 IGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPA-EIGQLTSLEIFQLE 358
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLT 212
NQ+TS+ + + LT L L NQLT
Sbjct: 359 RNQLTSLPTEVGQLTSLVEFRLRSNQLT 386
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTS+ + LT + L+L+ N+L SL ++G L+ L+ L + N+L +
Sbjct: 259 SLERLDLSGNQLTSVPLEIGQLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTS 318
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L LY N+N++TS+ + LT L++F ++ NQ+T + E L +L
Sbjct: 319 VPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSL-PTEVGQLTSLVE 377
Query: 181 ISLQNNQITSMNSSL 195
L++NQ+TS+ +++
Sbjct: 378 FRLRSNQLTSVPAAI 392
>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
Length = 982
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L NN ++ + T ++ L++ N L+SL + LT+L L+L+NN+L SL
Sbjct: 662 LQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSL 721
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L+ LQ L + N+L +LP++I + L SLY NN+++SL + LT LQ
Sbjct: 722 PAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLY 781
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+D NQ++ + E L NL S+ L NNQ++S+ + LT L LYL +NQL
Sbjct: 782 LDNNQLSSLPA-EIGQLTNLQSLYLDNNQLSSLPPGIGQLTNLQTLYLDNNQL 833
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L+SL + LT+L L+L NN+L SL ++G L+ LQ L + N+L +L
Sbjct: 616 LQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSL 675
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I + L +LY NN+++SL + LT LQ +D NQ++ + E L NL S+
Sbjct: 676 PAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPA-EIGQLTNLQSL 734
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NN+++S+ + + LT L LYL +NQL+ L +I L L+++ L N+++
Sbjct: 735 YLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSS-LPAEIGQLTNLQSLYLDNNQLS 788
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 102/186 (54%), Gaps = 8/186 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
A PP I + L++ N L+SL + LT+L L+L NN+L SL ++G L+ LQ
Sbjct: 421 ALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQT 480
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L ++ NQL +LP++I + L SLY NN+++SL + LT LQ F + +N +
Sbjct: 481 LYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSFYL-YNTLLSSLPA 539
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL S L N ++S+ + + LT L YL N L L +I L L+++ L
Sbjct: 540 EIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYL-DNTLLSSLPANIFQLTNLQSLYL 598
Query: 231 SYNKIN 236
S N+++
Sbjct: 599 SSNQLS 604
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L+ L + LT+L L+L NN+L SL ++G L+ LQ L + N+L +L
Sbjct: 593 LQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSL 652
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I + L +LY NN+++SL + LT LQ + N+++ + E L NL ++
Sbjct: 653 PAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPA-EIGQLTNLQTL 711
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NNQ++S+ + + LT L LYL +N+L+ L +I L L+++ L N+++
Sbjct: 712 YLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSS-LPAEIGQLTNLQSLYLFNNQLS 765
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 3/198 (1%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L NN ++ + T ++ L++ N L+SL + LT+L +L N L SL
Sbjct: 478 LQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSSL 537
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L+ LQ ++ L +LP++I + L S Y +N ++SL + LT LQ
Sbjct: 538 PAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPANIFQLTNLQSLY 597
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+++++ E L NL S+ L NN+++S+ + + LT L LYL +N+L+ L +
Sbjct: 598 LSSNQLSILQA-EIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSS-LPAE 655
Query: 219 IRGLKRLRTVDLSYNKIN 236
I L L+T+ L NK++
Sbjct: 656 IGQLTNLQTLYLFNNKLS 673
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N LT+L + LT+L L+L+NN+L SL ++G L+ LQ L + N+L +L
Sbjct: 409 VTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSL 468
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I + L +LY +NN+++SL + LT LQ + N+++ + E L NL S
Sbjct: 469 PAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPA-EIGQLTNLQSF 527
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L N ++S+ + + LT L YL + L+
Sbjct: 528 YLYNTLLSSLPAEIGQLTNLQSFYLDNTLLS 558
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 88/153 (57%), Gaps = 5/153 (3%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
SL +T+L+ L+ N+L +L +G L+ LQ L ++ NQL +LP++I + L SLY
Sbjct: 405 SLEEVTELD---LSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLF 461
Query: 138 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
NN+++SL + LT LQ +D NQ++ + E L NL S+ L NN+++S+ + +
Sbjct: 462 NNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPA-EIGQLTNLQSLYLFNNKLSSLPAEIGQ 520
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
LT L YL +N L L +I L L++ L
Sbjct: 521 LTNLQSFYL-YNTLLSSLPAEIGQLTNLQSFYL 552
>gi|320165160|gb|EFW42059.1| hypothetical protein CAOG_07191 [Capsaspora owczarzaki ATCC 30864]
Length = 805
Score = 87.4 bits (215), Expect = 5e-15, Method: Composition-based stats.
Identities = 71/228 (31%), Positives = 117/228 (51%), Gaps = 7/228 (3%)
Query: 20 LEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-N 76
L P + ++ G AL + L +N +T I +AF ++ L + N +TS+
Sbjct: 87 LLPRNNISSIAANAFTGLSALTYISLDSNKLTSIPTHAFTGLTALQHLLMQNNPVTSIPA 146
Query: 77 NSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSL 134
++ GLT LN L L NN++ S+ +L+ L L ++QN ++++P+D + L +L
Sbjct: 147 DAFAGLTALNSLVLFNNQITSISTNAFASLNALTTLQLQQNLIDSIPADAFAGLTALTNL 206
Query: 135 YANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-N 192
+NN+IT++ G GLT L ++ NQIT + F L L + L +N ITS+
Sbjct: 207 RMDNNQITTIPAGAFAGLTALNYLHLSNNQITSISATAFTGLTALSGLQLHSNYITSIPA 266
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
S+ + LT L L L NQ+T + GL L+ ++L N+I T
Sbjct: 267 SAFTSLTALIQLKLGTNQITSIPSNAFTGLTALQDLELHSNQITSLST 314
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/214 (32%), Positives = 105/214 (49%), Gaps = 7/214 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
+++ L G +L LLL NNI+ I NAF + + + N LTS+ ++ GLT L
Sbjct: 72 ISATALTGLTSLTQLLLPRNNISSIAANAFTGLSALTYISLDSNKLTSIPTHAFTGLTAL 131
Query: 86 NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L + NN + S+ L+ L LV+ NQ+ ++ ++ + L +L N I S
Sbjct: 132 QHLLMQNNPVTSIPADAFAGLTALNSLVLFNNQITSISTNAFASLNALTTLQLQQNLIDS 191
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKL 201
+ GLT L MD NQIT + F L L+ + L NNQITS++ ++ +GLT L
Sbjct: 192 IPADAFAGLTALTNLRMDNNQITTIPAGAFAGLTALNYLHLSNNQITSISATAFTGLTAL 251
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L N +T L L + L N+I
Sbjct: 252 SGLQLHSNYITSIPASAFTSLTALIQLKLGTNQI 285
Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 10/229 (4%)
Query: 26 SHPLTS---DDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL-NNSL 79
++P+TS D G AL +L+L NN IT I NAF + L + N + S+ ++
Sbjct: 138 NNPVTSIPADAFAGLTALNSLVLFNNQITSISTNAFASLNALTTLQLQQNLIDSIPADAF 197
Query: 80 RGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYAN 137
GLT L L ++NN++ ++ G L+ L L + NQ+ ++ + + L L +
Sbjct: 198 AGLTALTNLRMDNNQITTIPAGAFAGLTALNYLHLSNNQITSISATAFTGLTALSGLQLH 257
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SL 195
+N ITS+ LT L + NQIT + + F L L + L +NQITS+++ +
Sbjct: 258 SNYITSIPASAFTSLTALIQLKLGTNQITSIPSNAFTGLTALQDLELHSNQITSLSTDAF 317
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
GLT L L L+ N LT +GL + SY+ ++ N G
Sbjct: 318 QGLTGLVKLLLNSNPLTTLPPGLFQGLSNNLVIAESYSYLSPNNFTNGG 366
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 134 LYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L NN+ITS+ L GLT L + N I+ + + F L L ISL +N++TS+
Sbjct: 62 LNLQNNQITSISATALTGLTSLTQLLLPRNNISSIAANAFTGLSALTYISLDSNKLTSIP 121
Query: 193 S-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ + +GLT L +L + +N +T D GL L ++ L N+I T
Sbjct: 122 THAFTGLTALQHLLMQNNPVTSIPADAFAGLTALNSLVLFNNQITSIST 170
>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 511
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL + N L +L N + L L +L L NNRLK+L ++ L KL+ L + NQ L
Sbjct: 155 LEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTL 214
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L +NN++ +L + L L+ +D NQ+T++ + E L NLDS+
Sbjct: 215 PKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQ-EIGQLENLDSL 273
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L KL YL LS+NQL L +I L+ L ++L +N++
Sbjct: 274 ILSNNQLTTLPQEIGTLQKLQYLNLSNNQL-RTLPQEIGTLQELEWLNLEHNQL 326
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L V N L +L N + L +L WL+L++N+L L ++G L L L++ NQL L
Sbjct: 224 LEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNNQLTTL 283
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L +NN++ +L + L +L+ N++ NQ+ + + E L NL+ +
Sbjct: 284 PQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQ-EIDQLQNLEDL 342
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NN++ ++ + L +L +LYL H LT L ++I L++L+ + LS N++
Sbjct: 343 NLSNNRLKTLPKGIWKLQRLEWLYLEHAHLT-TLPNEIGTLQKLQRLFLSNNRL 395
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 5/207 (2%)
Query: 31 SDDLKGTPALITLLLVNNN--ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
SD LK P + +L +++N IT +E + KL++ N L L + L L WL
Sbjct: 31 SDALKN-PMNVRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWL 89
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
L NNRL+SL ++G L KL+ L +E NQL L +I +L L NN++T L +
Sbjct: 90 SLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEI 149
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
L KL+ ++ NQ+ + +E L +L +SL NN++ ++ + L KL LYL
Sbjct: 150 GKLQKLEKLDLSDNQLATL-PNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGD 208
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ L +I L+ L +D+S N++
Sbjct: 209 NQF-RTLPKEIDQLQNLEDLDVSNNQL 234
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 3/198 (1%)
Query: 42 TLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG 100
+L+L NN +T + E ++ L++ N L +L + L +L WL L +N+L +L
Sbjct: 272 SLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQ 331
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
++ L L+ L + N+L+ LP I +L LY + +T+L + L KLQ +
Sbjct: 332 EIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQKLQRLFLS 391
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N++ + + E L L+ + L+NN++ S+ + L L YL LS+NQL L ++I
Sbjct: 392 NNRLKTLPK-EIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQL-RTLPNEIG 449
Query: 221 GLKRLRTVDLSYNKINKF 238
L+ L +DLS N F
Sbjct: 450 QLQSLEDLDLSGNPFTTF 467
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Query: 49 NITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+ H A P I +L + N L +L + L L WL+L + L +L ++
Sbjct: 320 NLEHNQLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEI 379
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
GTL KLQ L + N+L+ LP +I +L LY NN++ SL + L L+ ++ N
Sbjct: 380 GTLQKLQRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNN 439
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
Q+ + +E L +L+ + L N T+ + G
Sbjct: 440 QLRTL-PNEIGQLQSLEDLDLSGNPFTTFPQEIVG 473
>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
JET]
gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
JET]
Length = 444
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 3/201 (1%)
Query: 39 ALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
L L L +N +T++ E +R L++ N LT+L+ + L +L L+L N+L +
Sbjct: 218 KLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTT 277
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L ++G L KLQ L +E +QL LP I+ L LY NN++T+L + L LQ
Sbjct: 278 LPKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQEL 337
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ N++T + +E + L L + L N++T++ + L KL LYL HNQL + L +
Sbjct: 338 YLSSNKLTTL-PEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQL-KTLPE 395
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L+ L +++L N + F
Sbjct: 396 EIGNLQSLESLNLRGNSLTSF 416
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 3/192 (1%)
Query: 45 LVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L NN +T + E +++L++GFN LT+L + L L L L +NRL +L ++G
Sbjct: 132 LENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEEIG 191
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L LQ L + NQL ALP I+ +L LY +NR+T+L + L L+ ++ NQ
Sbjct: 192 KLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQ 251
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+T + + E L NL + L NQ+T++ + L KL L+L +QLT L I L+
Sbjct: 252 LTTLSK-EIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLT-TLPKGIEKLQ 309
Query: 224 RLRTVDLSYNKI 235
LR + L N++
Sbjct: 310 NLRDLYLENNQL 321
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 23/192 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N L +L + L +L L L NN+L +L ++G L LQ L + NQL AL
Sbjct: 104 LQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTAL 163
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR------------ 169
P I+ +L L+ +NR+ +L + L LQ N+ NQ+T + +
Sbjct: 164 PKGIEKLQKLQELHLYSNRLANLPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLY 223
Query: 170 ----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+E + L NL + L+ NQ+T+++ + L L LYL NQLT L +I
Sbjct: 224 LYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLT-TLPKEI 282
Query: 220 RGLKRLRTVDLS 231
L++L+T+ L
Sbjct: 283 GKLQKLQTLHLE 294
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L +L + L L L L NRL +L ++G L LQ L +E NQL L
Sbjct: 81 LRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTTL 140
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N++T+L + L KLQ ++ N++ + +E L NL +
Sbjct: 141 PEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANL-PEEIGKLQNLQKL 199
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L KL LYL N+LT L ++I L+ LR + L N++
Sbjct: 200 NLGVNQLTALPKGIEKLQKLQQLYLYSNRLTN-LPEEIEKLQNLRDLYLEGNQL 252
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ + LT+L + L +L L+L NN+L +L + L LQ L + N+L L
Sbjct: 288 LQTLHLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTL 347
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L L + N++T+L + L KL+ +D NQ+ + +E NL +L+S+
Sbjct: 348 PEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLP-EEIGNLQSLESL 406
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+L+ N +TS + L KL LYL N
Sbjct: 407 NLRGNSLTSFPEEIGKLQKLQQLYLGGN 434
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 13/187 (6%)
Query: 57 AFPPTIRKLHVG-FNNLTSLNNSLRGLTDLNWLFL-------NNNRLKSLEGQLGTLSKL 108
F TI G + NLT +L+ TD+ +L+L +N+ L +L ++G L L
Sbjct: 25 CFCCTIEAKENGVYYNLTE---ALQHPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNL 81
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L + NQL LP +I +L L NR+ +L + L LQ +++ NQ+T +
Sbjct: 82 RDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTTL- 140
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+E L NL ++L NQ+T++ + L KL L+L N+L L ++I L+ L+ +
Sbjct: 141 PEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLAN-LPEEIGKLQNLQKL 199
Query: 229 DLSYNKI 235
+L N++
Sbjct: 200 NLGVNQL 206
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L L L L+ N+L +L ++G L KL+ L ++ NQL+ L
Sbjct: 334 LQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTL 393
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
P +I L SL N +TS + L KLQ + N ++++
Sbjct: 394 PEEIGNLQSLESLNLRGNSLTSFPEEIGKLQKLQQLYLGGNPFLRSQKEKI 444
>gi|398338577|ref|ZP_10523280.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
gi|418675895|ref|ZP_13237181.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400323660|gb|EJO71508.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 281
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N LT+L + L +L L L+NN+L +L ++G L KL+ L ++ NQL
Sbjct: 36 PMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQL 95
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L SL NN++T+L + L L+ ++ NQ+T + + E + L L
Sbjct: 96 TTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKDLESLDLRNNQLTTLPK-EIEYLKKL 154
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +NQ+T++ + L KL LYL +NQLT L +I L+ L +DL N++
Sbjct: 155 QVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLT-TLPKEIGYLEELWLLDLRKNQL 210
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L DL L L NN+L +L ++ L KLQ+L + NQL +P +I
Sbjct: 116 NQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLK 175
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L LY NN++T+L + L +L + ++ NQ+T + + E L L+ + L+NNQ T
Sbjct: 176 KLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPK-EIGKLQKLEKLYLKNNQFT 234
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+ + L KL L LDDI LK
Sbjct: 235 TFPKEIGKLQKLNTLN----------LDDIPALK 258
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 95/161 (59%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
LN +L+ D+ L L+ N+L +L ++ L +L+ L + NQL LP +I +L L
Sbjct: 29 LNKALQNPMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYL 88
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y ++N++T+L + L L+ ++ NQ+T + + E + L +L+S+ L+NNQ+T++
Sbjct: 89 YLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPK-EIEYLKDLESLDLRNNQLTTLPKE 147
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL L L+ NQLT + +I LK+L+ + L N++
Sbjct: 148 IEYLKKLQVLDLNDNQLT-TIPKEIGYLKKLQELYLINNQL 187
>gi|320169501|gb|EFW46400.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1286
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 31/240 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--------------------------PTI 62
+ +D G A+I+L L NN +T I NAF P +
Sbjct: 100 IPADAFTGLTAVISLQLNNNRLTDISANAFTGLSALSQLFLNNNRLSSVPAGAFAGLPAL 159
Query: 63 RKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEA 120
++L + N +TS++ +L GLT L WL L N++ S+ + T L+ L +LV+ N + +
Sbjct: 160 KQLQLNSNRITSISATLFTGLTALTWLRLEFNQITSIPASVFTDLTGLSVLVLRSNNITS 219
Query: 121 LPS-DIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+P + L + + N ITS+ GLT ++ NQIT + F L L
Sbjct: 220 IPPYAFTGLTALSQIDVSINLITSIPAFAFAGLTAATYLDLYINQITSISDSAFTGLTAL 279
Query: 179 DSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+++ NN++TS ++++ +GLT L YLYL NQ+T + GL L ++ L N+I
Sbjct: 280 TFLNMDNNRLTSILSTTFAGLTALQYLYLWSNQVTSIAPNTFAGLTALNSLQLYDNQITS 339
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 111/208 (53%), Gaps = 12/208 (5%)
Query: 43 LLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLE 99
L L NN IT I NAF + LH+ N +T++ + + L+ L L L NN + S+
Sbjct: 378 LSLFNNRITSIAANAFDDLTALGSLHLHTNRITNIPSTAFASLSALTQLHLYNNSITSIS 437
Query: 100 -GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSLDG-LLRGLTKL 154
G +LS + + + NQ+ ++P++ F+ + SL Y + N+ITS+ GLT L
Sbjct: 438 AGTFSSLSAVTYMYMYDNQISSIPANT--FTGMTSLKLLYLSGNQITSVSANAFSGLTAL 495
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
++ N+IT + F L L ++SL +NQI+S+ SS + LT L +LYL +NQ+T
Sbjct: 496 TQLSLYLNRITSISAAAFPGLTALLTLSLSDNQISSIPSSAFTDLTLLKFLYLYNNQITS 555
Query: 214 FLLDDIRGLKRLRTVDLSYNKI-NKFGT 240
+ GL L T+ L N I + F T
Sbjct: 556 IAANAFVGLPALSTLLLHNNTITSTFAT 583
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 28/209 (13%)
Query: 35 KGTPALITLLLVNNN-ITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFL 90
G P T L +NNN IT I +AFP ++ L V N +T + ++ GLT + L L
Sbjct: 57 SGIPNTTTQLYLNNNQITSIPTSAFPGLTVLQILQVYGNQITYIPADAFTGLTAVISLQL 116
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLR 149
NNNRL I N L S L L+ NNNR++S+ G
Sbjct: 117 NNNRLTD---------------ISANAFTGL-------SALSQLFLNNNRLSSVPAGAFA 154
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSH 208
GL L+ ++ N+IT + F L L + L+ NQITS+ +S+ + LT L+ L L
Sbjct: 155 GLPALKQLQLNSNRITSISATLFTGLTALTWLRLEFNQITSIPASVFTDLTGLSVLVLRS 214
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
N +T GL L +D+S N I
Sbjct: 215 NNITSIPPYAFTGLTALSQIDVSINLITS 243
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 79/286 (27%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDL 85
++++ G AL L L NN ++ + AF P +++L + N +TS++ +L GLT L
Sbjct: 124 ISANAFTGLSALSQLFLNNNRLSSVPAGAFAGLPALKQLQLNSNRITSISATLFTGLTAL 183
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALP--------------------SD 124
WL L N++ S+ + T L+ L +LV+ N + ++P +
Sbjct: 184 TWLRLEFNQITSIPASVFTDLTGLSVLVLRSNNITSIPPYAFTGLTALSQIDVSINLITS 243
Query: 125 IQLFSQLG-------SLYAN----------------------NNRITS-LDGLLRGLTKL 154
I F+ G LY N NNR+TS L GLT L
Sbjct: 244 IPAFAFAGLTAATYLDLYINQITSISDSAFTGLTALTFLNMDNNRLTSILSTTFAGLTAL 303
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM----------------------- 191
Q + NQ+T + + F L L+S+ L +NQITS+
Sbjct: 304 QYLYLWSNQVTSIAPNTFAGLTALNSLQLYDNQITSIPANAFDDLSVLNTLSLNDNLITS 363
Query: 192 --NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ + LT L YL L +N++T + L L ++ L N+I
Sbjct: 364 VPASAFANLTSLQYLSLFNNRITSIAANAFDDLTALGSLHLHTNRI 409
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVF 157
G + T S + I++ L A+PS I + LY NNN+ITS+ GLT LQ+
Sbjct: 34 AGGVCTCSVTTVNCIDK-ALTAIPSGIP--NTTTQLYLNNNQITSIPTSAFPGLTVLQIL 90
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLL 216
+ NQIT + D F L + S+ L NN++T +++ + +GL+ L+ L+L++N+L+
Sbjct: 91 QVYGNQITYIPADAFTGLTAVISLQLNNNRLTDISANAFTGLSALSQLFLNNNRLSSVPA 150
Query: 217 DDIRGLKRLRTVDLSYNKINK 237
GL L+ + L+ N+I
Sbjct: 151 GAFAGLPALKQLQLNSNRITS 171
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDL 85
+ + G AL +L L +N IT I NAF + L + N +TS+ S LT L
Sbjct: 316 IAPNTFAGLTALNSLQLYDNQITSIPANAFDDLSVLNTLSLNDNLITSVPASAFANLTSL 375
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
+L L NNR+ S+ L+ L L + N++ +PS S L L+ NN ITS
Sbjct: 376 QYLSLFNNRITSIAANAFDDLTALGSLHLHTNRITNIPSTAFASLSALTQLHLYNNSITS 435
Query: 144 LD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ G L+ + M NQI+ + + F + +L + L NQITS+++ + SGLT L
Sbjct: 436 ISAGTFSSLSAVTYMYMYDNQISSIPANTFTGMTSLKLLYLSGNQITSVSANAFSGLTAL 495
Query: 202 AYLYLSHNQLTEFLLDDIRG 221
L L N++T G
Sbjct: 496 TQLSLYLNRITSISAAAFPG 515
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 16/192 (8%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDLNWL 88
DDL AL +L L N IT+I AF + +LH+ N++TS++ + L+ + ++
Sbjct: 394 DDLT---ALGSLHLHTNRITNIPSTAFASLSALTQLHLYNNSITSISAGTFSSLSAVTYM 450
Query: 89 FLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALP----SDIQLFSQLGSLYANNNRITS 143
++ +N++ S+ T ++ L+LL + NQ+ ++ S + +QL SLY N RITS
Sbjct: 451 YMYDNQISSIPANTFTGMTSLKLLYLSGNQITSVSANAFSGLTALTQL-SLYLN--RITS 507
Query: 144 LDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GLT L ++ NQI+ + F +L L + L NNQITS+ + + GL L
Sbjct: 508 ISAAAFPGLTALLTLSLSDNQISSIPSSAFTDLTLLKFLYLYNNQITSIAANAFVGLPAL 567
Query: 202 AYLYLSHNQLTE 213
+ L L +N +T
Sbjct: 568 STLLLHNNTITS 579
>gi|421094636|ref|ZP_15555352.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410362698|gb|EKP13735.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|456891450|gb|EMG02161.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 331
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+G N L +L + L +L L L+NN+L +L ++ L LQ L + +NQL L
Sbjct: 113 LQELHIGGNQLKTLPKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLTIL 172
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N N +T+L + L LQ + +NQ+T++ + E + L L +
Sbjct: 173 PEEIGKLKNLTKLDLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLPK-EIRELQKLTVL 231
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ ++ + L KL LYL NQL F ++I LK L ++DLS+N++
Sbjct: 232 YLSYNQFKTLPKEIGELQKLTVLYLRSNQLKMF-PNEIGKLKELESLDLSHNQL 284
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L +L L LN N+ ++ ++G L LQ L I NQL+ L
Sbjct: 67 LRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTTIPNEIGYLKNLQELHIGGNQLKTL 126
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI L L+ +NN++ +L +R L LQ + NQ+T++ +E L NL +
Sbjct: 127 PKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLTIL-PEEIGKLKNLTKL 185
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L N++T++ + + L L L L +NQLT L +IR L++L + LSYN+
Sbjct: 186 DLNYNELTTLPNEIGKLQNLQELTLGYNQLT-VLPKEIRELQKLTVLYLSYNQ 237
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 6/167 (3%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
++NLT +L+ TD+ L L+N +LK+L +G L KL++L + NQL LP +I+
Sbjct: 32 YDNLTE---ALQNATDVRILSLHN-KLKTLPKDIGKLKKLRVLDLRGNQLTTLPKEIEQL 87
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
L L N N+ T++ + L LQ ++ NQ+ + +D L NL + L NN++
Sbjct: 88 QNLTELNLNKNQFTTIPNEIGYLKNLQELHIGGNQLKTLPKD-IGKLKNLQVLHLSNNKL 146
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ + + L L LYLS NQLT L ++I LK L +DL+YN++
Sbjct: 147 ATLPNEIRKLQNLQKLYLSENQLT-ILPEEIGKLKNLTKLDLNYNEL 192
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L +G+N LT L +R L L L+L+ N+ K+L ++G L KL +L + NQL+
Sbjct: 205 LQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEIGELQKLTVLYLRSNQLKMF 264
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKL 154
P++I +L SL ++N++T+L G L+ L KL
Sbjct: 265 PNEIGKLKELESLDLSHNQLTTLPKEIGELQNLRKL 300
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + +N LT+L N + L +L L L N+L L ++ L KL +L + NQ + LP
Sbjct: 184 KLDLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPK 243
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNL 178
+I +L LY +N++ + L +L+ ++ NQ+T + ++ E QNL L
Sbjct: 244 EIGELQKLTVLYLRSNQLKMFPNEIGKLKELESLDLSHNQLTTLPKEIGELQNLRKL 300
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
P IR+L ++ +N +L + L L L+L +N+LK ++G L +L+
Sbjct: 217 VLPKEIRELQKLTVLYLSYNQFKTLPKEIGELQKLTVLYLRSNQLKMFPNEIGKLKELES 276
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANN 138
L + NQL LP +I L LY ++
Sbjct: 277 LDLSHNQLTTLPKEIGELQNLRKLYLDD 304
>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 398
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 8/187 (4%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
+I H+ E +++LH+ +N LT+L + L +L L L+ N+L +L ++G L +L
Sbjct: 104 DIEHLKE------LQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKEL 157
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q+L + NQL LP +I +L L+ +N++T+L + L +LQV ++ NQ+T +
Sbjct: 158 QVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLP 217
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+ E L NL + L NNQ+ ++ + L L L LSHN+LT L +DI L+ L+ +
Sbjct: 218 K-EIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLT-TLPNDIGKLQNLQEL 275
Query: 229 DLSYNKI 235
L+ N++
Sbjct: 276 YLTNNQL 282
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 2/169 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N LT+L + L +L L L NN+LK+L ++G L LQ+L + N+L L
Sbjct: 203 LQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTL 262
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+DI L LY NN++T+L + L +LQ+ + NQ+ + + E L NL +
Sbjct: 263 PNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPK-EIGQLQNLQVL 321
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+L +N++T++ + L L LYL++NQLT L DI LK L+ + L
Sbjct: 322 NLSHNKLTTLPKDIGKLQNLQELYLTNNQLT-TLPKDIGYLKELQILHL 369
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N LT+L + L +L L L NN+L +L ++ L +LQ+L + N+L
Sbjct: 39 PTDVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKL 98
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+LP DI+ +L L+ + N++T+L + L +LQ ++D+NQ+T + + E L L
Sbjct: 99 TSLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPK-EIGYLKEL 157
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +NQ+T++ + L +L L+L NQLT L +I LK L+ + L N++
Sbjct: 158 QVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLT-TLPKEIGYLKELQVLHLYDNQL 213
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L L NN+LK+L ++G L LQ+L + N+L L
Sbjct: 272 LQELYLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTL 331
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
P DI L LY NN++T+L + L +LQ+ ++D I +R E
Sbjct: 332 PKDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILHLD--DIPALRSQE 379
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 119 EAL--PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
EAL P+D+++ +N++T+L + L LQV ++ NQ+T + + E ++L
Sbjct: 34 EALQNPTDVRILD------LKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPK-EIEHLK 86
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L + L +N++TS+ + L +L L+L +NQLT L DI LK L+ + L YN++
Sbjct: 87 ELQVLHLSHNKLTSLPKDIEHLKELQELHLDYNQLT-TLPKDIEHLKELQELHLDYNQL 144
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 43 LLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L NN +T + ++ + ++ L + N L +L + L +L L L++N+L +L
Sbjct: 275 LYLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKD 334
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
+G L LQ L + NQL LP DI +L L+ ++
Sbjct: 335 IGKLQNLQELYLTNNQLTTLPKDIGYLKELQILHLDD 371
>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
Length = 574
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL++ N LTS+ + LT L L LN N+L S+ +G L+ L+ L + NQL +
Sbjct: 191 SLEKLNLNGNQLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTS 250
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L LY N++TS+ + LT L+ +D NQ+T V + +Q L +L
Sbjct: 251 VPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQ-LTSLRV 309
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L +NQ+TS+ + + LT L LYLS NQLT +I L L+ + L N++
Sbjct: 310 LYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSV-PAEIGRLTELKELGLRDNQLTSV 366
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 95/174 (54%), Gaps = 22/174 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL+VG N LTS+ + LT L L L++N+L S+ ++ L+ L++L ++ NQL +
Sbjct: 260 SLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTS 319
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ------- 173
+P++I + L LY + N++TS+ + LT+L+ + NQ+T V + +Q
Sbjct: 320 VPAEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVL 379
Query: 174 ---------------NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +L+ + L+ N++TS+ + + LT L LYL NQLT
Sbjct: 380 YLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLT 433
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+LH+ N LTS+ + LT L L L++NRL S+ ++G L+ L+ L + NQL +
Sbjct: 99 SLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPAEIGQLTSLERLYLGGNQLTS 158
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L +N++TS+ + L L+ N++ NQ+T V E L +L
Sbjct: 159 VPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSVPA-EIGQLTSLKE 217
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L NQ+TS+ + + LT L L L NQLT
Sbjct: 218 LDLNGNQLTSVPADIGQLTDLKELGLRDNQLT 249
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 3/201 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L L N +T + E +++L + N LTS+ + LT L L+L++N L
Sbjct: 329 SLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDE 388
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L ++G L+ L+ L +E+N+L ++P++I + L LY N++TS+ + LT L
Sbjct: 389 LPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKL 448
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ ++T V E L +L + L NQ+TS+ + + L L LYL+ QLT
Sbjct: 449 YLSGTKLTSVPA-EIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSV-PA 506
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L L+ +DL NK+
Sbjct: 507 EIGQLTELKELDLRDNKLTSV 527
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++G N LTS+ + LT L L L +N+L S+ ++G L+ L+ L + NQL +
Sbjct: 145 SLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTS 204
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L N N++TS+ + LT L+ + NQ+T V E L +L+
Sbjct: 205 VPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPA-EIGQLASLEK 263
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + NQ+TS+ + + LT L L L NQLT +I L LR + L N++
Sbjct: 264 LYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSV-PAEIWQLTSLRVLYLDDNQLTSV 320
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTS+ + LT L L+L N+L S+ ++G L+ L L + NQL ++P+++ +
Sbjct: 39 NQLTSVPAEIGQLTSLTELYLFGNQLTSVPAEIGQLTSLTGLDLSGNQLTSVPAEVGQLT 98
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L+ NNR+TS+ + LT L+ +D N++T V E L +L+ + L NQ+T
Sbjct: 99 SLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPA-EIGQLTSLERLYLGGNQLT 157
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
S+ + + LT L L L NQLT +I L L ++L+ N++
Sbjct: 158 SVPAEIGRLTSLEELNLKSNQLTSV-PAEIGQLASLEKLNLNGNQLTSV 205
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Query: 45 LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L N +T + + T + +L++G N LTS+ + LT L L+L+ +L S+ ++G
Sbjct: 404 LERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIG 463
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L+ L++L + NQL +LP++I + L LY N ++TS+ + LT+L+ ++ N+
Sbjct: 464 QLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQLTELKELDLRDNK 523
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+T V + +Q L +L + L +NQ+TS+ +++
Sbjct: 524 LTSVPEEIWQ-LTSLRVLYLDDNQLTSVPAAI 554
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTS+ + LT L L+L N+L S+ ++G L+ L L + +L +
Sbjct: 398 SLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTS 457
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L LY N++TSL + L L+ ++ Q+T V E L L
Sbjct: 458 VPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSVPA-EIGQLTELKE 516
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L++N++TS+ + LT L LYL NQLT
Sbjct: 517 LDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLT 548
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 44/73 (60%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+L++ LTS+ + LT+L L L +N+L S+ ++ L+ L++L ++ NQL +
Sbjct: 490 SLRELYLNGKQLTSVPAEIGQLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTS 549
Query: 121 LPSDIQLFSQLGS 133
+P+ I+ G
Sbjct: 550 VPAAIRELKAAGC 562
>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 390
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 103/185 (55%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
A P I KL N LT+L + L +L L+LN N+L +L ++G L LQ
Sbjct: 143 ALPEEIGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQK 202
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
LV+ +NQL ALP +I L L N N++T+L + L LQ N+D NQ+T + +
Sbjct: 203 LVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPK- 261
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E + L NL + L NN++T++ + L KL +L L+ NQLT + +I L+ L+ ++L
Sbjct: 262 EIRKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKNQLTT-IPKEIGNLQNLKELNL 320
Query: 231 SYNKI 235
S N++
Sbjct: 321 SSNQL 325
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L LN N+L +L ++G L LQ L +++NQL L
Sbjct: 200 LQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTL 259
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L+ NN++T+L + L KL+ ++ NQ+T + + E NL NL +
Sbjct: 260 PKEIRKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKNQLTTIPK-EIGNLQNLKEL 318
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+L +NQ+T++ + L KL L L +NQLT L +I L+ L+ + L N
Sbjct: 319 NLSSNQLTTIPKEIENLQKLETLDLYNNQLTT-LPKEIGNLQNLQRLYLGGN 369
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ FN L +L + L L LFL N+ +L ++G L LQ + +NQL
Sbjct: 107 SLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTT 166
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L LY N N++T+L + L LQ ++ NQ+T + E NL NL
Sbjct: 167 LPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTAL-PIEIGNLQNLQK 225
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+T++ + L L L L NQLT L +IR L+ L+ + L NK+
Sbjct: 226 LVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTT-LPKEIRKLQNLQGLHLGNNKL 279
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL +GFN +T L + L L L L+ N+L +L ++G L L+ L + NQ AL
Sbjct: 85 LQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTAL 144
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L + ++ N++T+L + L LQ ++ NQ+T + E NL NL +
Sbjct: 145 PEEIGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTAL-PIEIGNLQNLQKL 203
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L+ NQLT + +I L+ L+ ++L N++
Sbjct: 204 VLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPI-EIGNLQNLQGLNLDKNQL 256
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
+ LN +L+ T + L+LN +L +L ++G L LQ L + +N+L LP +I L
Sbjct: 27 SKLNEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQ 86
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L N+IT L + L LQ N+ FNQ+ + + E NL +L + L NQ T++
Sbjct: 87 KLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPK-EIGNLQHLKRLFLGLNQFTALP 145
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L + S NQLT L +I L+ L+ + L+ N++
Sbjct: 146 EEIGKLQNLQEMESSKNQLTT-LPKEIGNLQNLQELYLNENQL 187
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L L L L N++ L ++G L LQ L + NQL L
Sbjct: 62 LQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATL 121
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ N+ T+L + L LQ NQ+T + + E NL NL +
Sbjct: 122 PKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPK-EIGNLQNLQEL 180
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L+ NQLT + +I L+ L+ + L+ N++
Sbjct: 181 YLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPI-EIGNLQNLQKLVLNRNQL 233
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N+L +L ++G L LQ L + N++
Sbjct: 36 PTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKI 95
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L + N++ +L + L L+ + NQ T + +E L NL
Sbjct: 96 TVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTAL-PEEIGKLQNL 154
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ NQ+T++ + L L LYL+ NQLT + +I L+ L+ + L+ N++
Sbjct: 155 QEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPI-EIGNLQNLQKLVLNRNQL 210
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
P IRKL H+G N LT+L + L L WL LN N+L ++ ++G L L+
Sbjct: 258 TLPKEIRKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKE 317
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL +P +I+ +L +L NN++T+L + L LQ + N M +++
Sbjct: 318 LNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQNLQRLYLGGNPSLMNQKE 377
Query: 171 EFQNL 175
+ Q L
Sbjct: 378 KIQKL 382
>gi|320165418|gb|EFW42317.1| tyrosine-protein kinase CSK [Capsaspora owczarzaki ATCC 30864]
Length = 953
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 11/221 (4%)
Query: 26 SHPLTS---DDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSL 79
S+P+TS + G AL L L+ N IT I F + L+ N +TS+ ++
Sbjct: 8 SNPITSIPTNAFTGLTALTELSLLYNQITGISAGTFTGLTALTALYFASNQITSIPADAF 67
Query: 80 RGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLF--SQLGSLYA 136
GLT L L L N++ S+ G +L+ L L ++ NQ+ ++ F + L L
Sbjct: 68 TGLTALTHLSLQYNQITSISGTAFTSLTALTYLSLQYNQITSISGTAFTFNLTALTYLSL 127
Query: 137 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSS 194
++N+ITS+ G GLT L ++ NQIT + + F L L S+ LQNNQITS+ ++
Sbjct: 128 DSNQITSIPVGAFTGLTALTYLSLYTNQITSISVNAFTGLTALASLVLQNNQITSIPAAA 187
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+GL L L L NQ+T D GL L + + N+I
Sbjct: 188 CTGLPALTELSLGINQITSIPADAFTGLTALTYLSVENNQI 228
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 8/215 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNS--LRGLTD 84
+ +D G AL L L N IT I AF + L + +N +TS++ + LT
Sbjct: 62 IPADAFTGLTALTHLSLQYNQITSISGTAFTSLTALTYLSLQYNQITSISGTAFTFNLTA 121
Query: 85 LNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 142
L +L L++N++ S+ G L+ L L + NQ+ ++ + + L SL NN+IT
Sbjct: 122 LTYLSLDSNQITSIPVGAFTGLTALTYLSLYTNQITSISVNAFTGLTALASLVLQNNQIT 181
Query: 143 SLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK 200
S+ GL L ++ NQIT + D F L L +S++NNQITS+ + + + L
Sbjct: 182 SIPAAACTGLPALTELSLGINQITSIPADAFTGLTALTYLSVENNQITSIPAGAFTDLAA 241
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L+L NQ+T GL L T+ L N I
Sbjct: 242 LTDLHLDGNQITSIPDFSFTGLTALTTLALQNNPI 276
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 93/186 (50%), Gaps = 12/186 (6%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRL 95
AL L L +N IT I AF + L + N +TS++ N+ GLT L L L NN++
Sbjct: 121 ALTYLSLDSNQITSIPVGAFTGLTALTYLSLYTNQITSISVNAFTGLTALASLVLQNNQI 180
Query: 96 KSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLT 152
S+ T L L L + NQ+ ++P+D + L L NN+ITS+ G L
Sbjct: 181 TSIPAAACTGLPALTELSLGINQITSIPADAFTGLTALTYLSVENNQITSIPAGAFTDLA 240
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTK-----LAYLYL 206
L ++D NQIT + F L L +++LQNN IT++ L GL L+Y YL
Sbjct: 241 ALTDLHLDGNQITSIPDFSFTGLTALTTLALQNNPITTLPPGLFKGLPNALALSLSYPYL 300
Query: 207 SHNQLT 212
+ N T
Sbjct: 301 APNNFT 306
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 26/174 (14%)
Query: 66 HVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPS 123
++ N +TS+ N+ GLT L L L N++ + G L+ L L NQ+ ++P+
Sbjct: 5 YINSNPITSIPTNAFTGLTALTELSLLYNQITGISAGTFTGLTALTALYFASNQITSIPA 64
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
D GLT L ++ +NQIT + F +L L +SL
Sbjct: 65 DA----------------------FTGLTALTHLSLQYNQITSISGTAFTSLTALTYLSL 102
Query: 184 QNNQITSMNSS--LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
Q NQITS++ + LT L YL L NQ+T + GL L + L N+I
Sbjct: 103 QYNQITSISGTAFTFNLTALTYLSLDSNQITSIPVGAFTGLTALTYLSLYTNQI 156
>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
Length = 423
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 98/178 (55%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N LTSL + LT L L L NNRL SL ++G L+ L+ L + NQL +
Sbjct: 224 SLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALWLHDNQLTS 283
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L+ + NR+TS+ + LT L ++ N++T + +E L +LD
Sbjct: 284 VPAEIGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSL-PEEIGQLTSLDR 342
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NQ+ S+ + L+ L +LYL NQLT +I L L +DLS N++
Sbjct: 343 LYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSI-PAEIAQLTSLSVLDLSGNQLTSV 399
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+++L + N LTSL + LT L L+L NN+L ++G L+ L L++ NQL +
Sbjct: 40 TLQELKLYNNQLTSLPAEIGQLTSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTS 99
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I L + L LY ++N++T + + LT L+ + NQ+T + E L +L
Sbjct: 100 VPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHGNQLTSLPA-EIGQLTSLTG 158
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NN++TS+ + + LT L LYL NQLT +I L L ++L N++
Sbjct: 159 LRLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSV-PAEIGQLTSLEKLELYDNQLTSV 215
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 3/201 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
AL LLL N +T + E ++R+L++ N LT + + LT L L+L+ N+L S
Sbjct: 86 ALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHGNQLTS 145
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L ++G L+ L L + N+L +LP++I + L +LY + N++TS+ + LT L+
Sbjct: 146 LPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKL 205
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQ+T V E L +L ++ L NQ+TS+ + + LT L L L +N+LT L
Sbjct: 206 ELYDNQLTSVPA-EIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTS-LPA 263
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L L + L N++
Sbjct: 264 EIGQLTSLEALWLHDNQLTSV 284
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 3/198 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L L NN +T + E ++ L++ N LTS+ + LT L L L +N+L S
Sbjct: 155 SLTGLRLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTS 214
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ L+ L + NQL +LP++I + L L NNR+TSL + LT L+
Sbjct: 215 VPAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEAL 274
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQ+T V E L +L + L N++TS+ + + LT L L L +N+LT L +
Sbjct: 275 WLHDNQLTSVPA-EIGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTS-LPE 332
Query: 218 DIRGLKRLRTVDLSYNKI 235
+I L L + L N++
Sbjct: 333 EIGQLTSLDRLYLGRNQL 350
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTSL + LT L L L N L S+ ++ L+ LQ L + NQL +LP++I +
Sbjct: 3 NQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLT 62
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY NN++T + LT L + NQ+T V E L +L + L +NQ+T
Sbjct: 63 SLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPA-EIGLLTSLRELYLHDNQLT 121
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + + LT L L+L NQLT L +I L L + L N++
Sbjct: 122 GVPAEIVQLTTLEALWLHGNQLTS-LPAEIGQLTSLTGLRLYNNRLTSL 169
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTSL + LT L+ L+L N+L S+ ++G LS L L + NQL ++P++I +
Sbjct: 325 NRLTSLPEEIGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIAQLT 384
Query: 130 QLGSLYANNNRITSLDGLLRGL 151
L L + N++TS+ +R L
Sbjct: 385 SLSVLDLSGNQLTSVPAAIREL 406
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 45 LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L NN +T + E T + +L++G N L S+ + L+ L WL+L +N+L S+ ++
Sbjct: 322 LYNNRLTSLPEEIGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIA 381
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGS 133
L+ L +L + NQL ++P+ I+ G
Sbjct: 382 QLTSLSVLDLSGNQLTSVPAAIRELRAAGC 411
>gi|307150709|ref|YP_003886093.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
gi|306980937|gb|ADN12818.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
Length = 876
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 126/242 (52%), Gaps = 23/242 (9%)
Query: 14 ALNLID-----LEPETGS-------HPLTSDDLKGTPALITLL--LVNNNITHIHENAFP 59
+LNL D L PE G H L+ + L P I L L ++H H P
Sbjct: 66 SLNLTDNQLTALPPEIGKLSNLSRLH-LSYNKLTSLPPEIGQLTILCELYLSHNHLETLP 124
Query: 60 PTIR------KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVI 113
TI +L + +N LT+L ++++GL L+WL LNNN+L +L ++G L+ L L +
Sbjct: 125 FTIENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDV 184
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
NQL LP +I L S+ + N++TSL + L L + NQ+T++ E
Sbjct: 185 GYNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTIL-PPEIG 243
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L NL S++L N+++S+ + LTKL L LSHNQL E L +I L +L ++ L N
Sbjct: 244 YLSNLISLNLSYNKLSSLPPEIGQLTKLIQLRLSHNQLQE-LPAEIGHLTQLTSLVLKNN 302
Query: 234 KI 235
++
Sbjct: 303 QL 304
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 105/194 (54%), Gaps = 8/194 (4%)
Query: 49 NITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+T A PP I KL H+ +N LTSL + LT L L+L++N L++L +
Sbjct: 68 NLTDNQLTALPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTI 127
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
L + L + NQL LPS I+ +L L NNN++T+L + L L ++ +N
Sbjct: 128 ENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYN 187
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T + E L NL SI + N++TS+ + L L L +S+NQLT L +I L
Sbjct: 188 QLTTL-PPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLT-ILPPEIGYL 245
Query: 223 KRLRTVDLSYNKIN 236
L +++LSYNK++
Sbjct: 246 SNLISLNLSYNKLS 259
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
+ + + + + A L + F L +L + LT L +L L NN+L +L ++G
Sbjct: 1 MTDEELQQVIQQAIEEKAETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGK 60
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
L L L + NQL ALP +I S L L+ + N++TSL + LT L + N +
Sbjct: 61 LINLTSLNLTDNQLTALPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHL 120
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
+ +NL ++ +SL NQ+T++ S++ GL +L++L L++NQLT L +I L
Sbjct: 121 ETLPFT-IENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTT-LPPEIGQLNS 178
Query: 225 LRTVDLSYNKI 235
L +D+ YN++
Sbjct: 179 LNQLDVGYNQL 189
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 45 LVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L++ ++++ + PP I +L + N LT L + L++L L L+ N+L SL
Sbjct: 202 LISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYLSNLISLNLSYNKLSSL 261
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
++G L+KL L + NQL+ LP++I +QL SL NN++ +L
Sbjct: 262 PPEIGQLTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLLTL 307
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 42 TLLLVNNNITHIHENAFPPTIR------KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
+L + NN +T PP I L++ +N L+SL + LT L L L++N+L
Sbjct: 227 SLTISNNQLT-----ILPPEIGYLSNLISLNLSYNKLSSLPPEIGQLTKLIQLRLSHNQL 281
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
+ L ++G L++L LV++ NQL LP ++
Sbjct: 282 QELPAEIGHLTQLTSLVLKNNQLLTLPFEL 311
>gi|320165720|gb|EFW42619.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 664
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 118/221 (53%), Gaps = 14/221 (6%)
Query: 27 HPLT---SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLR 80
+P+T S G L TL L NN IT + NAF + L++ N L+++ +++
Sbjct: 93 NPITNIASSAFSGLSVLNTLDLTNNQITTVPANAFSGLSKLNTLYLYNNWLSAIPSSAFT 152
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGS---LYA 136
GLT L L L+NN++ ++ T L+ LQLL + NQ+ + D FS L + LY
Sbjct: 153 GLTALTQLLLHNNQITTVPSSAFTGLTALQLLYLYNNQIATVAIDA--FSGLTALVQLYL 210
Query: 137 NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSS 194
NN+ITS+ GL+KL ++ N ++ + F L L + L NNQIT++ +S+
Sbjct: 211 YNNQITSISANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSA 270
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+GLT L +LYL +NQ+ ++ GL L + L N+I
Sbjct: 271 FTGLTALQFLYLYNNQIATVAINAFSGLTALVQLRLDTNQI 311
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
S G AL LLL NN IT + +AF GLT L +L+L
Sbjct: 244 SSAFTGLTALTQLLLYNNQITTVPSSAF---------------------TGLTALQFLYL 282
Query: 91 NNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGL 147
NN++ ++ L+ L L ++ NQ+ +P++ S+L +L+ NN ++++
Sbjct: 283 YNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPSSA 342
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYL 206
GLT L +D NQIT V + F L L + L NNQIT++ + + SGLT L LYL
Sbjct: 343 FTGLTALTQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVPANAFSGLTALVQLYL 402
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+NQ+T + GL L + L N+I
Sbjct: 403 YNNQITTIPSSALTGLSALTQLYLYNNQITS 433
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 35/238 (14%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNW 87
S G AL L L NN I + +AF + +L++ N +TS++ N+ GL+ LN
Sbjct: 172 SSAFTGLTALQLLYLYNNQIATVAIDAFSGLTALVQLYLYNNQITSISANAFSGLSKLNT 231
Query: 88 LFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITS 143
L LNNN L ++ T L+ L L++ NQ+ +PS F+ L +L Y NN+I +
Sbjct: 232 LQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSA--FTGLTALQFLYLYNNQIAT 289
Query: 144 LD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-------- 194
+ GLT L +D NQIT V + F L L+++ L NN ++++ SS
Sbjct: 290 VAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPSSAFTGLTAL 349
Query: 195 -----------------LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SGLT L YLYL +NQ+T + GL L + L N+I
Sbjct: 350 TQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVPANAFSGLTALVQLYLYNNQI 407
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTS-LNNSLRGLTDLNW 87
S L G AL L L NN IT + N F + L + N +TS L N+ GLT L +
Sbjct: 412 SSALTGLSALTQLYLYNNQITSVPANGFSGLTALTDLRLFNNTITSILANAFTGLTKLTY 471
Query: 88 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L+ N+L S+ G L+ L L++ N L A+PS
Sbjct: 472 LDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSAVPSSA--------------------- 510
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLY 205
GLT L + NQIT V + F L L + L NQIT++++S +G++ L LY
Sbjct: 511 -FTGLTALLYLYLYNNQITTVAANAFTGLTALVQLQLYGNQITTISASAFAGMSSLVQLY 569
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L N++T ++ GL L ++LS N+I
Sbjct: 570 LYSNRITAIFVNAFTGLTHLSLLELSNNQITS 601
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 107/209 (51%), Gaps = 8/209 (3%)
Query: 35 KGTPALITLL-LVNNNITHIHENAFPPTIRKLHVGF--NNLTSLNNS-LRGLTDLNWLFL 90
G P T+L L NN IT I NAF ++ N +T++ +S GL+ LN L L
Sbjct: 55 TGIPVTTTILYLQNNQITSISANAFSSLTLLTYLSLSSNPITNIASSAFSGLSVLNTLDL 114
Query: 91 NNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGL 147
NN++ ++ LSKL L + N L A+PS + L L +NN+IT++
Sbjct: 115 TNNQITTVPANAFSGLSKLNTLYLYNNWLSAIPSSAFTGLTALTQLLLHNNQITTVPSSA 174
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYL 206
GLT LQ+ + NQI V D F L L + L NNQITS+++ + SGL+KL L L
Sbjct: 175 FTGLTALQLLYLYNNQIATVAIDAFSGLTALVQLYLYNNQITSISANAFSGLSKLNTLQL 234
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++N L+ GL L + L N+I
Sbjct: 235 NNNWLSAIPSSAFTGLTALTQLLLYNNQI 263
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 7/212 (3%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNW 87
S G AL L L N IT + NAF + L++ N +T++ N+ GLT L
Sbjct: 340 SSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVPANAFSGLTALVQ 399
Query: 88 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS-L 144
L+L NN++ ++ L LS L L + NQ+ ++P++ + L L NN ITS L
Sbjct: 400 LYLYNNQITTIPSSALTGLSALTQLYLYNNQITSVPANGFSGLTALTDLRLFNNTITSIL 459
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAY 203
GLTKL ++ NQ+T + F L L + L NN ++++ +S+ +GLT L Y
Sbjct: 460 ANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSAVPSSAFTGLTALLY 519
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LYL +NQ+T + GL L + L N+I
Sbjct: 520 LYLYNNQITTVAANAFTGLTALVQLQLYGNQI 551
>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 448
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
P IR+L + N LT L + L +L L+L+NN+L + ++G L KLQ L
Sbjct: 109 LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 168
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ++ +P +I+ +L SLY NN++T+L + L KLQ N+ +NQI + + E
Sbjct: 169 NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQ-E 227
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+ L L + L NQ+T++ + L KL L L +NQLT L +I L+ L+ + L+
Sbjct: 228 IEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTT-LPQEIGQLQNLKVLFLN 286
Query: 232 YNKI 235
N++
Sbjct: 287 NNQL 290
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L L WL L+ N++K+L ++ L KLQ L + +NQL L
Sbjct: 188 LQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SL +NN++T+L + L L+V ++ NQ+T + + E +L NL +
Sbjct: 248 PQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQ-EIGHLQNLQDL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L L L +NQLT L +I L+ L+T+ LS N++
Sbjct: 307 YLVSNQLTTIPKEIGQLQNLQMLDLGNNQLT-ILPKEIGKLQNLQTLYLSNNQL 359
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L L +R L +L L L++N+L L ++ L LQ+L + NQL L
Sbjct: 73 LQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTIL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ N+ NQI + + E + L L S+
Sbjct: 133 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPK-EIEKLQKLQSL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L KL +L LS+NQ+ + L +I L++L+ + L N++
Sbjct: 192 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQI-KTLPQEIEKLQKLQWLYLHKNQL 244
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 52 HIHEN---AFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++H+N P I KL +G +N LT+L + L +L LFLNNN+L ++ ++
Sbjct: 238 YLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEI 297
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL +P +I L L NN++T L + L LQ + N
Sbjct: 298 GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNN 357
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T + + E L NL + L NNQ+T++ + L L LYLS+NQL + +I L
Sbjct: 358 QLTTIPK-EIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLIT-IPKEIGQL 415
Query: 223 KRLRTVDLSYNK 234
+ L+T+ L N+
Sbjct: 416 QNLQTLYLRNNQ 427
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
D+ L L+ +LK+L ++G L LQ+L + NQL LP +I+ L L ++N++
Sbjct: 49 DVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLII 108
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L +R L LQ+ ++ NQ+T++ + E L NL + L NNQ+T+ + L KL +
Sbjct: 109 LPKEIRQLKNLQMLDLRSNQLTILPK-EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQW 167
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS NQ+ + + +I L++L+++ L N++
Sbjct: 168 LNLSANQI-KTIPKEIEKLQKLQSLYLPNNQL 198
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L++N+L L ++ L LQ+L + NQL
Sbjct: 47 PLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L L +N++T L + L LQ + NQ+T + E L L
Sbjct: 107 IILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPK-EIGKLQKL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQI ++ + L KL LYL +NQLT L +I L++L+ ++LSYN+I
Sbjct: 166 QWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTT-LPQEIGKLQKLQWLNLSYNQI 221
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T I E ++ L +G N LT L + L +L L+L+NN+L ++ +
Sbjct: 306 LYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKE 365
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ L + NQL +P +I L LY +NN++ ++ + L LQ +
Sbjct: 366 IGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRN 425
Query: 162 NQITMVRRDEFQNL 175
NQ ++ ++ + L
Sbjct: 426 NQFSIEEKERIRKL 439
>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 374
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
P IR+L + N LT L + L +L L+L+NN+L + ++G L KLQ L
Sbjct: 35 LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 94
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ++ +P +I+ +L SLY NN++T+L + L KLQ N+ +NQI + + E
Sbjct: 95 NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQ-E 153
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+ L L + L NQ+T++ + L KL L L +NQLT L +I L+ L+ + L+
Sbjct: 154 IEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT-TLPQEIGQLQNLKVLFLN 212
Query: 232 YNKI 235
N++
Sbjct: 213 NNQL 216
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L L +R L +L L L++N++ L ++ L LQ+L + NQL LP +
Sbjct: 2 LDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKE 61
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L LY +NN++T+ + L KLQ N+ NQI + + E + L L S+ L
Sbjct: 62 IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPK-EIEKLQKLQSLYLP 120
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NNQ+T++ + L KL +L LS+NQ+ + L +I L++L+ + L N++
Sbjct: 121 NNQLTTLPQEIGKLQKLQWLNLSYNQI-KTLPQEIEKLQKLQWLYLHKNQL 170
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L L WL L+ N++K+L ++ L KLQ L + +NQL L
Sbjct: 114 LQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTL 173
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SL +NN++T+L + L L+V ++ NQ+T + + E +L NL +
Sbjct: 174 PQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQ-EIGHLQNLQDL 232
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L L L +NQLT L +I L+ L+ + LS N++
Sbjct: 233 YLVSNQLTTIPKEIGQLQNLQMLDLGNNQLT-ILPKEIGKLQNLQWLYLSNNQL 285
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 52 HIHEN---AFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++H+N P I KL +G +N LT+L + L +L LFLNNN+L +L ++
Sbjct: 164 YLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEI 223
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL +P +I L L NN++T L + L LQ + N
Sbjct: 224 GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNN 283
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T + + E L NL + L NNQ+T++ + L L LYLS+NQL + +I L
Sbjct: 284 QLTTIPK-EIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLI-TIPKEIGQL 341
Query: 223 KRLRTVDLSYNK 234
+ L+T+ L N+
Sbjct: 342 QNLQTLYLRNNQ 353
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
P IR+L + N + L +R L +L L L +N+L L ++G L LQ L
Sbjct: 12 LPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL 71
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQL P +I +L L + N+I ++ + L KLQ + NQ+T + + E
Sbjct: 72 YLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQ-E 130
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L L ++L NQI ++ + L KL +LYL NQLT L +I L++L ++ L
Sbjct: 131 IGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLT-TLPQEIEKLQKLESLGLD 189
Query: 232 YNKI 235
N++
Sbjct: 190 NNQL 193
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T I E ++ L +G N LT L + L +L WL+L+NN+L ++ +
Sbjct: 232 LYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKE 291
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ L + NQL +P +I L LY +NN++ ++ + L LQ +
Sbjct: 292 IGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRN 351
Query: 162 NQITMVRRDEFQNL 175
NQ ++ ++ + L
Sbjct: 352 NQFSIEEKERIRKL 365
>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 427
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
P IR+L + N LT L + L +L L+L+NN+L + ++G L KLQ L
Sbjct: 88 LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 147
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ++ +P +I+ +L SLY NN++T+L + L KLQ N+ +NQI + + E
Sbjct: 148 NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQ-E 206
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+ L L + L NQ+T++ + L KL L L +NQLT L +I L+ L+ + L+
Sbjct: 207 IEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT-TLPQEIGQLQNLKVLFLN 265
Query: 232 YNKI 235
N++
Sbjct: 266 NNQL 269
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L L +R L +L L L++N+L L ++ L LQ+L + NQL L
Sbjct: 52 LQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTIL 111
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ N+ NQI + + E + L L S+
Sbjct: 112 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPK-EIEKLQKLQSL 170
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L KL +L LS+NQ+ + L +I L++L+ + L N++
Sbjct: 171 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQI-KTLPQEIEKLQKLQWLYLHKNQL 223
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L L WL L+ N++K+L ++ L KLQ L + +NQL L
Sbjct: 167 LQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SL +NN++T+L + L L+V ++ NQ+T + + E +L NL +
Sbjct: 227 PQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQ-EIGHLQNLQDL 285
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L L L +NQLT L +I L+ L+ + LS N++
Sbjct: 286 YLVSNQLTTIPKEIGQLQNLQMLDLGNNQLT-ILPKEIGKLQNLQELYLSNNQL 338
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 92/161 (57%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +LK+L ++G L LQ+L + NQL LP +I+ L L
Sbjct: 19 LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQML 78
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
++N++ L +R L LQ+ ++ NQ+T++ + E L NL + L NNQ+T+
Sbjct: 79 DLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPK-EIGKLQNLQELYLSNNQLTTFPKE 137
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL +L LS NQ+ + + +I L++L+++ L N++
Sbjct: 138 IGKLQKLQWLNLSANQI-KTIPKEIEKLQKLQSLYLPNNQL 177
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L++N+L L ++ L LQ+L + NQL
Sbjct: 26 PLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQL 85
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L L +N++T L + L LQ + NQ+T + E L L
Sbjct: 86 IILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPK-EIGKLQKL 144
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQI ++ + L KL LYL +NQLT L +I L++L+ ++LSYN+I
Sbjct: 145 QWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT-TLPQEIGKLQKLQWLNLSYNQI 200
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT++ + L +L L+L +N+L ++ ++G L LQ+L + NQL L
Sbjct: 259 LKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTIL 318
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T++ + L LQ + NQ+T + + E L NL +
Sbjct: 319 PKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPK-EIGQLQNLQEL 377
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+ ++ + L L LYL +NQ + + IR L
Sbjct: 378 YLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKL 418
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T I E ++ L +G N LT L + L +L L+L+NN+L ++ +
Sbjct: 285 LYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKE 344
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ L + NQL +P +I L LY +NN++ ++ + L LQ +
Sbjct: 345 IGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRN 404
Query: 162 NQITMVRRDEFQNL 175
NQ ++ ++ + L
Sbjct: 405 NQFSIEEKERIRKL 418
>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 447
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
P IR+L + N LT L + L +L L+L+NN+L + ++G L KLQ L
Sbjct: 108 LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 167
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ++ +P +I+ +L SLY NN++T+L + L KLQ N+ +NQI + + E
Sbjct: 168 NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQ-E 226
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+ L L + L NQ+T++ + L KL L L +NQLT L +I L+ L+ + L+
Sbjct: 227 IEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTT-LPQEIGQLQNLKVLFLN 285
Query: 232 YNKI 235
N++
Sbjct: 286 NNQL 289
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L L +R L +L L L++N+L L ++ L LQ+L + NQL L
Sbjct: 72 LQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTIL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ N+ NQI + + E + L L S+
Sbjct: 132 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPK-EIEKLQKLQSL 190
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L KL +L LS+NQ+ + L +I L++L+ + L N++
Sbjct: 191 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQI-KTLPQEIEKLQKLQWLYLHKNQL 243
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L L WL L+ N++K+L ++ L KLQ L + +NQL L
Sbjct: 187 LQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTL 246
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SL +NN++T+L + L L+V ++ NQ+T + + E +L NL +
Sbjct: 247 PQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQ-EIGHLQNLQDL 305
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L L L +NQLT L +I L+ L+ + LS N++
Sbjct: 306 YLVSNQLTTIPKEIGQLQNLQMLDLGNNQLT-ILPKEIGKLQNLQELYLSNNQL 358
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 92/161 (57%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +LK+L ++G L LQ+L + NQL LP +I+ L L
Sbjct: 39 LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQML 98
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
++N++ L +R L LQ+ ++ NQ+T++ + E L NL + L NNQ+T+
Sbjct: 99 DLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPK-EIGKLQNLQELYLSNNQLTTFPKE 157
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL +L LS NQ+ + + +I L++L+++ L N++
Sbjct: 158 IGKLQKLQWLNLSANQI-KTIPKEIEKLQKLQSLYLPNNQL 197
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L++N+L L ++ L LQ+L + NQL
Sbjct: 46 PLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L L +N++T L + L LQ + NQ+T + E L L
Sbjct: 106 IILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPK-EIGKLQKL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQI ++ + L KL LYL +NQLT L +I L++L+ ++LSYN+I
Sbjct: 165 QWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTT-LPQEIGKLQKLQWLNLSYNQI 220
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT++ + L +L L+L +N+L ++ ++G L LQ+L + NQL L
Sbjct: 279 LKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTIL 338
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T++ + L LQ + NQ+T + + E L NL +
Sbjct: 339 PKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPK-EIGQLQNLQEL 397
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+ ++ + L L LYL +NQ + + IR L
Sbjct: 398 YLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKL 438
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T I E ++ L +G N LT L + L +L L+L+NN+L ++ +
Sbjct: 305 LYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKE 364
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ L + NQL +P +I L LY +NN++ ++ + L LQ +
Sbjct: 365 IGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRN 424
Query: 162 NQITMVRRDEFQNL 175
NQ ++ ++ + L
Sbjct: 425 NQFSIEEKERIRKL 438
>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
[Organic Lake phycodnavirus 1]
Length = 598
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 103/180 (57%), Gaps = 2/180 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LT L S+ GL +L LF ++NRL + + L+ LQ+L I+ N+L L
Sbjct: 139 MRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQL 198
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I +L L NN ++ L + LT LQ+ ++ +N+++ + + NL NL +
Sbjct: 199 PKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSEL-PESISNLTNLQEL 257
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
++NNQ+T + S++ LT L LY+ +NQL++ L I L L+ + ++ NK+++ R
Sbjct: 258 YIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPL-RIGNLTHLQILAIANNKLSELPER 316
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL +G N L+ L S+ LT L L + N L L + L+ LQ L IE NQL L
Sbjct: 208 LKKLDIGNNELSELPESITNLTHLQMLDIGYNELSELPESISNLTNLQELYIENNQLTQL 267
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I + L LY +NN+++ L + LT LQ+ + N+++ + + NL NL +
Sbjct: 268 PESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILAIANNKLSEL-PERISNLTNLQKL 326
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+QNNQ+T + + LT L L + +NQLT+ + + I L L T+ L+ N
Sbjct: 327 YIQNNQLTRLPLRIGNLTNLKVLDIKNNQLTQ-IPESISNLTNLETLVLTNN 377
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L L S+ L +L L +N NRL L +G + K++ L IE N+L L
Sbjct: 93 LQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLL 152
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L L+ ++NR++ + + LT LQ+ ++ N++T + + L L +
Sbjct: 153 PVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPK-HIGKLRKLKKL 211
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ NN+++ + S++ LT L L + +N+L+E L + I L L+ + + N++ +
Sbjct: 212 DIGNNELSELPESITNLTHLQMLDIGYNELSE-LPESISNLTNLQELYIENNQLTQL 267
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L L +S+ L L L + NN L L +G L LQ L IE N L L
Sbjct: 47 LQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQL 106
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I +L L N NR+T L + + K++ ++ N++T++ L NL+ +
Sbjct: 107 PESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVS-IGGLQNLEQL 165
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+N+++ + S+ LT L L + N+LT+ L I L++L+ +D+ N++++
Sbjct: 166 FTSSNRLSQIPESICNLTNLQMLDIKDNELTQ-LPKHIGKLRKLKKLDIGNNELSEL 221
>gi|320166209|gb|EFW43108.1| ephrin type-B receptor 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1219
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 118/241 (48%), Gaps = 31/241 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
++++ G AL L L NNNIT I + F P + +LH+ FN +TS++ NS GLT L
Sbjct: 68 ISANAFAGLTALTDLQLNNNNITIIPDYTFANLPALTELHLFFNPITSISANSFAGLTVL 127
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITS 143
N L N ++ S+ T LSKL + + NQ+ ++ P+ S L LY N N+ITS
Sbjct: 128 NLLNSYNCQITSIAANAFTDLSKLTNMQMSGNQITSIAPNVFSGMSALKILYLNGNQITS 187
Query: 144 LDG-------------------------LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ G++ L++ ++ NQIT + F +L L
Sbjct: 188 ISASAFTGLTALTYLSLDSNQISSIALNAFPGMSALKILRLNINQITGISAGVFTDLSAL 247
Query: 179 DSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ L +NQITS+++ + +GLT L +L L NQ+T L L T+ LS NKI
Sbjct: 248 KELWLNDNQITSISANAFTGLTALTFLRLYVNQITSISPGAFTDLGALTTLILSTNKITS 307
Query: 238 F 238
Sbjct: 308 I 308
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDL 85
+++ G AL L L +N I+ I NAFP ++ L + N +T ++ + L+ L
Sbjct: 188 ISASAFTGLTALTYLSLDSNQISSIALNAFPGMSALKILRLNINQITGISAGVFTDLSAL 247
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITS 143
L+LN+N++ S+ T L+ L L + NQ+ ++ P L +L + N+ITS
Sbjct: 248 KELWLNDNQITSISANAFTGLTALTFLRLYVNQITSISPGAFTDLGALTTLILSTNKITS 307
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ + GLT L +D NQIT + F +L L ++ L N ITS+++ + +GLT L
Sbjct: 308 ISENAFTGLTALTFLQLDANQITSISAGAFTDLGALTTLILSINTITSISANAFTGLTAL 367
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LYL NQL GL LR + L N I
Sbjct: 368 TALYLQQNQLDSISAIAFTGLTALRELWLQVNLITSI 404
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%)
Query: 39 ALITLLLVNNNITHIHENAFPP----TIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNN 93
AL L L +N IT I NAF T +L+V N +TS++ + L L L L+ N
Sbjct: 246 ALKELWLNDNQITSISANAFTGLTALTFLRLYV--NQITSISPGAFTDLGALTTLILSTN 303
Query: 94 RLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSLDG-LL 148
++ S+ E L+ L L ++ NQ+ ++ + F+ LG+L + N ITS+
Sbjct: 304 KITSISENAFTGLTALTFLQLDANQITSISAGA--FTDLGALTTLILSINTITSISANAF 361
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLS 207
GLT L + NQ+ + F L L + LQ N ITS+++ + S LT L +YL+
Sbjct: 362 TGLTALTALYLQQNQLDSISAIAFTGLTALRELWLQVNLITSISANAFSDLTTLVGIYLN 421
Query: 208 HNQLTEFLLDDIRGLKRLR--TVDLSYNKINK 237
N T +GL+ + + DLS ++++
Sbjct: 422 RNPFTTLPPGLFKGLRNVSHLSRDLSTAQVSQ 453
>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 659
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + FN+LT+L + L +L L LN+ +L +L ++G L LQLL++ NQL AL
Sbjct: 96 LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTAL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ NNN++T+L +R L LQ+ ++ NQ+T++ + E L NL +
Sbjct: 156 PKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPK-EIGQLQNLQEL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T + + L L L L+ +LT L +I L+ L+ +DLS+N +
Sbjct: 215 YLSYNQLTILPKEIGQLENLQRLNLNSQKLT-TLPKEIGQLRNLQWLDLSFNSL 267
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 23/189 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +T+L + L +L WL L+ N+L +L ++G L LQ L + QNQL LP +I
Sbjct: 449 NRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 508
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
L L + N++T+L + L L+V ++D NQ+T + ++
Sbjct: 509 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 568
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL + L +NQ+ ++ + L L L L NQLT F +IR LK L+
Sbjct: 569 LPKEIGQLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQE 627
Query: 228 VDLSYNKIN 236
+ L N ++
Sbjct: 628 LHLYLNPLS 636
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 57 AFPPTI---RKLHVGF---NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
A P I + L V F N LT+L +R L +L L L NN+L L ++G L LQ
Sbjct: 154 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 213
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL LP +I L L N+ ++T+L + L LQ ++ FN +T + +
Sbjct: 214 LYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPK- 272
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L N++ ++ + L L L L+ N+LT L +IR L+ L+ +DL
Sbjct: 273 EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLT-TLPKEIRQLRNLQELDL 331
Query: 231 SYNKI 235
N++
Sbjct: 332 HRNQL 336
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ LT+L + L +L WL L+ N L +L ++G L LQ L + QN+L L
Sbjct: 234 LQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 293
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++T+L +R L LQ ++ NQ+T + + E L NL ++
Sbjct: 294 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK-EIGQLQNLKTL 352
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L Q+T++ + L L L L QLT L +I L+ L+T++L ++
Sbjct: 353 NLIVTQLTTLPKEIGELQNLKTLNLIVTQLT-TLPKEIGELQNLKTLNLIVTQL 405
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 395 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 454
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L LQ ++ NQ+T + + E L NL +
Sbjct: 455 PKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPK-EIGQLQNLQEL 513
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+T++ + L L L L +NQLT + +R L+ L+ + L N+++
Sbjct: 514 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLS 567
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +L +L ++G L L+ L + NQL L
Sbjct: 372 LKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTL 431
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NRIT+L + L LQ + NQ+T + + E L NL +
Sbjct: 432 PKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPK-EIGQLQNLQRL 490
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L NQLT L +I L+ LR +DL N++
Sbjct: 491 DLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKEIEQLQNLRVLDLDNNQL 543
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L + QL L
Sbjct: 303 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 362
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQN----- 174
P +I L +L ++T+L + L L+ N+ Q+T + ++ E QN
Sbjct: 363 PKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLN 422
Query: 175 ---------------LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
L NL+ + L+ N+IT++ + L L +L L NQLT L +I
Sbjct: 423 LLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLT-TLPKEI 481
Query: 220 RGLKRLRTVDLSYNKI 235
L+ L+ +DL N++
Sbjct: 482 GQLQNLQRLDLHQNQL 497
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L L L L +NRL +L ++G L LQ+L + NQL L
Sbjct: 533 LRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLMTL 592
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L + N++T+ +R L LQ ++ N ++ + + L
Sbjct: 593 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIRRL 646
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------ 170
+L LP +I L L + N +T+L + L LQ ++ FN +T + ++
Sbjct: 59 KLTILPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLEN 118
Query: 171 ----------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
E L NL + L NQ+T++ + L L L+L++NQLT
Sbjct: 119 LQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLT-T 177
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
L +IR LK L+ +DL N++
Sbjct: 178 LPTEIRQLKNLQMLDLGNNQL 198
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 47 NNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
NN +T + + +++ L +G N L++L + L +L L L +N+L +L ++G L
Sbjct: 540 NNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLMTLPKEIGQL 599
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
LQ L +++NQL P +I+ L L+ N ++S
Sbjct: 600 QNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 637
>gi|418707326|ref|ZP_13268152.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772373|gb|EKR47561.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456971331|gb|EMG11964.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 354
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 71 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY ++NR+T+L + L L+ ++ NQ+T + +
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 190
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQIT + + ++ L KL YLYLS NQL L +I
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 249
Query: 220 RGLKRLRTVDLSYNKI 235
L+ L+T+DL N++
Sbjct: 250 EQLENLQTLDLRNNQL 265
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 38 LTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L +N++T+++
Sbjct: 98 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLHSNRLTTLSKD 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 157 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 199
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+L L ++ L LQLL + N+L
Sbjct: 45 PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L L +N++T L + L LQ+ + N++T + +D + L NL
Sbjct: 105 TTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ L NNQ+T++ + + L L LYLS NQ F +I L+ L+ + L+ N+I
Sbjct: 164 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATF-PKEIGQLQNLKVLFLNNNQI 219
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 2/193 (1%)
Query: 31 SDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
S D++ L +L L NN +T + +E ++ L++ N + + L +L LF
Sbjct: 154 SKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLF 213
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
LNNN++ L ++ L KLQ L + NQL LP +I+ L +L NN++ +L +
Sbjct: 214 LNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIE 273
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L LQ + NQ+T++ + E L NL +SL NQ+T++ + + L L LYL++N
Sbjct: 274 QLKNLQTLFLSNNQLTILPQ-EIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 332
Query: 210 QLTEFLLDDIRGL 222
Q + IR L
Sbjct: 333 QFSSQEKKRIRKL 345
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L LFL+NN+L L ++G L L L + NQL LP++I+
Sbjct: 263 NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK 322
Query: 130 QLGSLYANNNRITSLDG--LLRGLTKLQVF 157
L +LY NNN+ +S + + + L K Q++
Sbjct: 323 NLQTLYLNNNQFSSQEKKRIRKLLPKCQIY 352
>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
Length = 401
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I ++L++ N L +L N + L +L L L+ N+LK+L ++G L LQ+
Sbjct: 152 AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL+ LP +I L L NNN+ ++ + L LQV ++ +NQ V +
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTV-PE 270
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L NNQ ++ L L L L+ NQLT L ++IR LK LR + L
Sbjct: 271 EIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTT-LPNEIRQLKNLRELHL 329
Query: 231 SYNKI 235
SYN++
Sbjct: 330 SYNQL 334
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ D+ L LN +LK+L ++G L LQ+L + NQL LP +I L
Sbjct: 36 TDLTKALKNPLDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQ 95
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ + N++T+ + L LQ + N++T + + E L NL + L NQ T+
Sbjct: 96 ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPK-EIGQLKNLRELYLNTNQFTAFP 154
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQL + L ++I L+ LR + LSYN++
Sbjct: 155 KEIGQLKNLQQLNLYANQL-KTLPNEIGQLQNLRELHLSYNQL 196
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L LNNN+L +L ++G L LQ L + NQL
Sbjct: 45 PLDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I L +L + NR+T+L + L L+ ++ NQ T + E L NL
Sbjct: 105 TTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ+ ++ + + L L L+LS+NQL + L +I L+ L+ +DL+ N++
Sbjct: 164 QQLNLYANQLKTLPNEIGQLQNLRELHLSYNQL-KTLSAEIGQLQNLQVLDLNDNQL 219
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L +L + L +L L L+ N+L + ++G L LQ LV+ +N+L LP +
Sbjct: 74 LELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKE 133
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L LY N N+ T+ + L LQ N+ NQ+ + +E L NL + L
Sbjct: 134 IGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTL-PNEIGQLQNLRELHLS 192
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
NQ+ ++++ + L L L L+ NQL + L +I LK L+ +DL+ N+
Sbjct: 193 YNQLKTLSAEIGQLQNLQVLDLNDNQL-KTLPKEIGQLKNLQMLDLNNNQ 241
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G+N ++ + L +L LFLNNN+ K++ + G L LQ+L + NQL LP++
Sbjct: 258 LDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNE 317
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
I+ L L+ + N++ +L + L L+ ++ NQ+ + ++
Sbjct: 318 IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKE 363
>gi|449105191|ref|ZP_21741896.1| hypothetical protein HMPREF9729_00161 [Treponema denticola ASLM]
gi|451969497|ref|ZP_21922726.1| hypothetical protein HMPREF9728_01926 [Treponema denticola US-Trep]
gi|448967178|gb|EMB47819.1| hypothetical protein HMPREF9729_00161 [Treponema denticola ASLM]
gi|451701594|gb|EMD56055.1| hypothetical protein HMPREF9728_01926 [Treponema denticola US-Trep]
Length = 424
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 115/208 (55%), Gaps = 19/208 (9%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
LKG ALI L+ N +T + +++L+ N LTSL+ +R LT L+ L+ N
Sbjct: 81 LKG--ALIELVCYKNRLTSLDVRGLTA-LQELYCQDNILTSLD--VRELTGLHTLYCGKN 135
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
R +L+ + L+ LQ L N++ +L D++ + L +LY +NNR+TSLD ++GLT
Sbjct: 136 RFTALD--IRGLTALQELYCNDNEIASL--DVRGLTGLHTLYCDNNRLTSLD--VQGLTA 189
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
LQ + FN++T + + Q L L + +NQ+TS++ + LT L LY N+LT
Sbjct: 190 LQWLDCHFNKLTSL---DVQGLPALQVLECSSNQLTSLDVHV--LTALKNLYCQDNKLTS 244
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKFGTR 241
D+RGL LRT+ + N++ R
Sbjct: 245 L---DVRGLTGLRTLFCNDNRLTALDVR 269
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 17/215 (7%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
G + T+ D++G AL L +N I + + L+ N LTSL+ ++GLT
Sbjct: 132 CGKNRFTALDIRGLTALQELYCNDNEIASLDVRGLTG-LHTLYCDNNRLTSLD--VQGLT 188
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L WL + N+L SL+ Q L LQ+L NQL +L D+ + + L +LY +N++TS
Sbjct: 189 ALQWLDCHFNKLTSLDVQ--GLPALQVLECSSNQLTSL--DVHVLTALKNLYCQDNKLTS 244
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
LD +RGLT L+ + N++T + L LD S N I S++ + GLT L
Sbjct: 245 LD--VRGLTGLRTLFCNDNRLTALDVRRLTALQKLDCSS---NAIASID--VRGLTGLHT 297
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LY +N+LT D++GL L+ + S N+I
Sbjct: 298 LYCENNRLTTL---DVQGLTALQLLVCSDNQITAL 329
>gi|260798366|ref|XP_002594171.1| hypothetical protein BRAFLDRAFT_65021 [Branchiostoma floridae]
gi|229279404|gb|EEN50182.1| hypothetical protein BRAFLDRAFT_65021 [Branchiostoma floridae]
Length = 365
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 119/219 (54%), Gaps = 11/219 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSL-RGLTDL 85
L +D G L L L +N ++ + + F +++L + N LTSL+ + GL +L
Sbjct: 112 LPADAFAGLGHLQRLELYHNKLSALPNDIFNGLGHLQRLDLYQNELTSLSADIFNGLGNL 171
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRI 141
L + N L+SL + L KLQ L + QN+L +LPSDI F LGSL + N++
Sbjct: 172 AILDMYQNELRSLPADIFAGLGKLQELWLGQNELASLPSDI--FVGLGSLRELWLGQNKL 229
Query: 142 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLT 199
SL + +GL + ++D NQ+T + D F+ L +L+ + L N I+S+ + + SG
Sbjct: 230 PSLPANVFQGLHNVTSLHLDNNQLTSLPADAFEGLDSLEWLDLHRNDISSIEAGAFSGTP 289
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
KL +L L +N ++ D L RL+ + LS+NKIN F
Sbjct: 290 KLQHLDLEYNNISSIAADAFVNLPRLQALLLSHNKINVF 328
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 58 FPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQ 115
P +I +L + N +T+L S + +L L NN++ +E + L+ L L + Q
Sbjct: 47 LPASIVRLDLRDNAITTLRQSDFLKYRYVTYLHLGNNKISLIESKTFSNLTSLTELYLYQ 106
Query: 116 NQLEALPSDIQLFSQLGSLYA---NNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDE 171
NQL +LP+D F+ LG L +N++++L + + GL LQ ++ N++T + D
Sbjct: 107 NQLASLPADA--FAGLGHLQRLELYHNKLSALPNDIFNGLGHLQRLDLYQNELTSLSADI 164
Query: 172 FQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
F L NL + + N++ S+ + + +GL KL L+L N+L D GL LR + L
Sbjct: 165 FNGLGNLAILDMYQNELRSLPADIFAGLGKLQELWLGQNELASLPSDIFVGLGSLRELWL 224
Query: 231 SYNKI 235
NK+
Sbjct: 225 GQNKL 229
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N IT +R+ +F + + L NN+I+ + S + S LT L LYL NQL D
Sbjct: 59 NAITTLRQSDFLKYRYVTYLHLGNNKISLIESKTFSNLTSLTELYLYQNQLASLPADAFA 118
Query: 221 GLKRLRTVDLSYNKINKF 238
GL L+ ++L +NK++
Sbjct: 119 GLGHLQRLELYHNKLSAL 136
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLS 207
R +T L + N N+I+++ F NL +L + L NQ+ S+ + + +GL L L L
Sbjct: 73 RYVTYLHLGN---NKISLIESKTFSNLTSLTELYLYQNQLASLPADAFAGLGHLQRLELY 129
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
HN+L+ D GL L+ +DL N++
Sbjct: 130 HNKLSALPNDIFNGLGHLQRLDLYQNELTSLSA 162
>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 401
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I ++L++ N L +L N + L +L L L+ N+LK+L ++G L LQ+
Sbjct: 152 AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL+ LP +I L L NNN+ ++ + L LQV ++ +NQ V +
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTV-PE 270
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L NNQ ++ L L L L+ NQLT L ++IR LK LR + L
Sbjct: 271 EIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTT-LPNEIRQLKNLRELHL 329
Query: 231 SYNKI 235
SYN++
Sbjct: 330 SYNQL 334
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L LNNN+L +L ++G L LQ L + NQL
Sbjct: 45 PLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I L +L + NR+T+L + L L+ ++ NQ T + E L NL
Sbjct: 105 TTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ+ ++ + + L L L+LS+NQL + L +I L+ L+ +DL+ N++
Sbjct: 164 QQLNLYANQLKTLPNEIGQLQNLRELHLSYNQL-KTLSAEIGQLQNLQVLDLNDNQL 219
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L +L + L +L L L+ N+L + ++G L LQ LV+ +N+L LP +
Sbjct: 74 LELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKE 133
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L LY N N+ T+ + L LQ N+ NQ+ + +E L NL + L
Sbjct: 134 IGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTL-PNEIGQLQNLRELHLS 192
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
NQ+ ++++ + L L L L+ NQL + L +I LK L+ +DL+ N+
Sbjct: 193 YNQLKTLSAEIGQLQNLQVLDLNDNQL-KTLPKEIGQLKNLQMLDLNNNQ 241
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ D+ L L+ +LK+L ++G L LQ+L + NQL LP +I L
Sbjct: 36 TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQ 95
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ + N++T+ + L LQ + N++T + + E L NL + L NQ T+
Sbjct: 96 ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPK-EIGQLKNLRELYLNTNQFTAFP 154
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQL + L ++I L+ LR + LSYN++
Sbjct: 155 KEIGQLKNLQQLNLYANQL-KTLPNEIGQLQNLRELHLSYNQL 196
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G+N ++ + L +L LFLNNN+ K++ + G L LQ+L + NQL LP++
Sbjct: 258 LDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNE 317
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
I+ L L+ + N++ +L + L L+ ++ NQ+ + ++
Sbjct: 318 IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKE 363
>gi|418700552|ref|ZP_13261494.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410760453|gb|EKR26649.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 260
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 15/215 (6%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNN-ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRG 81
E G + + LK + TL L NN IT E + L + N L +L +
Sbjct: 25 EKGHYQNLTKALKNPTDVQTLDLSNNKLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQ 84
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L L +L+L++N+L +L ++G L +LQ L + +NQL LP +I+ L SL NN++
Sbjct: 85 LQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQL 144
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T+L + L +LQV ++ NQ+T + +E + L L + L+NNQ+T+++ + L KL
Sbjct: 145 TTLPKEIGQLKELQVLDLSNNQLTTL-PNEIEFLKRLQELYLRNNQLTALSKGIEYLKKL 203
Query: 202 AYLYLSHNQLT-------------EFLLDDIRGLK 223
L LS NQLT E LDDI LK
Sbjct: 204 QKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVLK 238
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 33/123 (26%)
Query: 115 QNQLEAL--PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
QN +AL P+D+Q +L +NN++ +L E
Sbjct: 30 QNLTKALKNPTDVQ------TLDLSNNKLITLPK------------------------EI 59
Query: 173 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
L L+ +SL NQ+ ++ + L KL YLYLS NQLT L +I LK L+ +DLS
Sbjct: 60 GQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQLT-TLPKEIGYLKELQELDLSR 118
Query: 233 NKI 235
N++
Sbjct: 119 NQL 121
>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 371
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L G N +T+L+ + L +L LFLNNN+L +L ++G L LQ L + NQL L
Sbjct: 119 LQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ +L + L KLQ N+ NQ+ + + E L NL +
Sbjct: 179 PKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPK-EIAQLKNLQEL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NQ+ ++ + L KL LYL+ NQLT + ++I L+ L+ + LSYN+
Sbjct: 238 YLSENQLMTLPKEIGQLEKLQKLYLNANQLTT-IPNEIAQLQNLQVLFLSYNQ 289
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
Query: 40 LITLLLVNNN-ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L NN IT E A +++L++ N L +L + L L L L NN+L +L
Sbjct: 165 LQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITL 224
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L LQ L + +NQL LP +I +L LY N N++T++ + L LQV
Sbjct: 225 PKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLF 284
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ +NQ + EF L NL ++L NQ+T++ + L L LYL +NQ F +++
Sbjct: 285 LSYNQFKTIPV-EFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQ---FSIEE 340
Query: 219 IRGLKR-LRTVDLSYNKI 235
+G + ++ + NKI
Sbjct: 341 KKGFESFFQSAKFTLNKI 358
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT++ + L +L L L+ N+L ++ ++ L LQ+L NQ+ L
Sbjct: 73 LQELNLDANQLTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L L+ NNN++T+L + L LQ N+ NQ+ + + E L NL +
Sbjct: 133 SQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPK-EIAQLKNLQEL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+ ++ + L KL L L +NQL L +I LK L+ + LS N++
Sbjct: 192 YLSENQLMTLPKEIGQLEKLQELNLWNNQLIT-LPKEIAQLKNLQELYLSENQL 244
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L+ N+L ++ ++ L LQ L ++ NQL
Sbjct: 47 PLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +I+ L L +N+IT+L + L L+V ++ NQ+T + + E L NL
Sbjct: 107 TTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPK-EIGQLKNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L NNQ+ ++ ++ L L LYLS NQL L +I L++L+ ++L N++
Sbjct: 166 QTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMT-LPKEIGQLEKLQELNLWNNQL 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +LK+L ++G L LQ L ++ NQL + +I+ L L
Sbjct: 40 LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ N++T++ + L LQV + NQIT + + E L NL + L NNQ+T++
Sbjct: 100 NLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQ-EIGQLQNLKVLFLNNNQLTTLPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +NQL L +I LK L+ + LS N++
Sbjct: 159 IGQLKNLQTLNLWNNQLIT-LPKEIAQLKNLQELYLSENQL 198
>gi|149173780|ref|ZP_01852409.1| putative lipoprotein [Planctomyces maris DSM 8797]
gi|148847310|gb|EDL61644.1| putative lipoprotein [Planctomyces maris DSM 8797]
Length = 470
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ PP KLH + N + ++ +S+ GL L +L+ NR+K L Q+G L L+
Sbjct: 173 SLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPPQIGNLENLET 232
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +NQ+E LPS+I L L N +TSL + L L+ ++ N +T + +
Sbjct: 233 LDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLTSLPK- 291
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
EF +L L+ +SLQNN +TS+ +S+ L K+ LYL NQL+
Sbjct: 292 EFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQLS 333
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N+L+ L+ + L +L WL +++N ++ L ++G LS+L+ L + +N+L L +
Sbjct: 72 LNISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPE 131
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
S L L ++N + +L L L+ N+D N I + F+ LH L+S+S+
Sbjct: 132 FGQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSNSIASL-PPVFEKLHQLNSLSMN 190
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N++ ++ S+ GL KL YLY N++ E L I L+ L T+DL N+I
Sbjct: 191 GNEMVTVTDSIGGLKKLRYLYALKNRIKE-LPPQIGNLENLETLDLRENQI 240
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L L+ L+ L L L++N LK+L + G L L+ L ++ N + +L
Sbjct: 115 LKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSNSIASL 174
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + QL SL N N + ++ + GL KL+ N+I + + NL NL+++
Sbjct: 175 PPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKEL-PPQIGNLENLETL 233
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ NQI + S + L L L L N LT L +I LK L+ +DL +N +
Sbjct: 234 DLRENQIEFLPSEIGNLRNLKRLDLFKNHLTS-LPPEIGKLKNLKDLDLMHNDL 286
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 54 HENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
H + PP I KL + N+LTSL LT L L L NN L S+ + L K
Sbjct: 262 HLTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKK 321
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
+ L ++ NQL +LP + LG L+ + N+ TS+ + L L+ + NQIT +
Sbjct: 322 IPELYLQSNQLSSLPPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITEL 381
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L L S+ L N I + +S LT L+ L++ L+ ++ LK L
Sbjct: 382 PA-EIGRLKKLRSLDLIGNPIKQLPPEISQLTSLSSFSFDDPTLSD--LNHLKPLKNLEY 438
Query: 228 VDLSY 232
+ +
Sbjct: 439 LSFGF 443
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N+LTSL + L +L L L +N L SL + G L+ L+ L ++ N L ++
Sbjct: 253 LKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSI 312
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I ++ LY +N+++SL L +D NQ T + E L NL+ +
Sbjct: 313 PASIIRLKKIPELYLQSNQLSSLPPEFGNHLSLGGLFLDQNQFTSI-PPEIWKLQNLERL 371
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
S +NQIT + + + L KL L L N + +
Sbjct: 372 SFADNQITELPAEIGRLKKLRSLDLIGNPIKQL 404
>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
Length = 1408
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 112/238 (47%), Gaps = 31/238 (13%)
Query: 31 SDDLKGTPALITLL-------LVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGL 82
S+ + P LI L + +N IT I E A +R+LHV N +T + ++ L
Sbjct: 135 SNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANL 194
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
++L L +++N++ + + L L+ L + N++ +P I + L LY NN+IT
Sbjct: 195 SNLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNNQIT 254
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRR----------------------DEFQNLHNLDS 180
+ ++ LT L ++ +NQIT + D L NL
Sbjct: 255 EIPEVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDALAKLINLTQ 314
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NQIT + +L+ LT L L L NQ+TE + + I L L +DLSYN+I K
Sbjct: 315 LDLSYNQITKIPEALAKLTNLTQLILYSNQITE-IPEVIAKLTNLTQLDLSYNQITKI 371
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 113/218 (51%), Gaps = 10/218 (4%)
Query: 29 LTSDDLKGTPALIT-------LLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLR 80
++S+ + P +I L L NN IT I E T + +L + +N +T ++ +L
Sbjct: 225 VSSNKITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQITKISEALA 284
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L +L + L+NN++ + L L L L + NQ+ +P + + L L +N+
Sbjct: 285 KLINLTQIILHNNKITEIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQ 344
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
IT + ++ LT L ++ +NQIT + + L NL + L +N+I+ + +L+ L
Sbjct: 345 ITEIPEVIAKLTNLTQLDLSYNQITKI-PEALAKLTNLTQLILYSNRISEIPEALAKLIN 403
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L + LS+N+++E + + + L L +DLSYN+I K
Sbjct: 404 LTQIILSYNRISE-IPEALAKLTNLTQLDLSYNQITKI 440
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFN-NLTSLNNSLRGLTDLNWLFLNNNRLKS 97
L L L NN IT I E T + +L +G N N++ + ++ LT+L L L ++++
Sbjct: 542 LTQLYLRNNRITEIPEALAKLTNLTQLDLGTNYNISEIPEAITKLTNLTQLNLTSSQITE 601
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ + L+ L L + NQ+ +P I + L L +N+IT + + LT L
Sbjct: 602 IPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQITEIPEAIAKLTNLTQL 661
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
N+ NQIT + + L NL + L NQIT + +++ LT L L L+ NQ+TE + D
Sbjct: 662 NLTSNQITKIP-EAIAKLTNLTQLILSYNQITEIPEAIAKLTNLTQLILTSNQITE-IPD 719
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
I L L +DLSYN+I++
Sbjct: 720 AITKLTNLTQLDLSYNRISEI 740
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT + ++ L++L L+ N+N + + + LS L+ L + N++ +P I S L
Sbjct: 115 LTEIPEAIANLSNLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNL 174
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L+ ++N+IT + + L+ L+ ++ NQIT + + L NL + + +N+IT +
Sbjct: 175 RELHVSSNQITEIPEAIANLSNLRELHVSSNQITEI-PEAIAKLINLRELQVSSNKITEI 233
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
++ LT L LYL +NQ+TE + + I L L +DLSYN+I K
Sbjct: 234 PEVIAKLTNLRKLYLRNNQITE-IPEVIAKLTNLTQLDLSYNQITKIS 280
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L ++L +N IT I E T +R+L++ +N +T + +L LT+L L L++N++ +
Sbjct: 450 LTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKI 509
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
L LS L L + +N++ +P + + L LY NNRIT + L LT L +
Sbjct: 510 PKALAKLSNLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLD 569
Query: 159 MDFN------------------------QITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ N QIT + + L NL ++L +NQI + +
Sbjct: 570 LGTNYNISEIPEAITKLTNLTQLNLTSSQITEI-PEVIAKLTNLTQLNLTSNQIAEIPEA 628
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++ LT L L L+ NQ+TE + + I L L ++L+ N+I K
Sbjct: 629 IAKLTNLTQLILTSNQITE-IPEAIAKLTNLTQLNLTSNQITKI 671
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 3/195 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L+L +N I+ I E A + ++ + +N ++ + +L LT+L L L+ N++ +
Sbjct: 381 LTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQITKI 440
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
L L L +++ N++ +P + + L LY + NRIT + L LT L N
Sbjct: 441 PEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLN 500
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQI + + L NL + L N+IT + +L+ LT L LYL +N++TE + +
Sbjct: 501 LSDNQIIKIPK-ALAKLSNLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITE-IPEA 558
Query: 219 IRGLKRLRTVDLSYN 233
+ L L +DL N
Sbjct: 559 LAKLTNLTQLDLGTN 573
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
V NNL +L L GL +L L ++ N L+S+ + + L+ L++ + +L +P I
Sbjct: 64 VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIA 123
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
S L LY N+N I+ + L+ L+ L+ ++ N+IT + + L NL + + +N
Sbjct: 124 NLSNLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEI-PEAIAKLSNLRELHVSSN 182
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QIT + +++ L+ L L++S NQ+TE + + I L LR + +S NKI +
Sbjct: 183 QITEIPEAIANLSNLRELHVSSNQITE-IPEAIAKLINLRELQVSSNKITEI 233
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 3/192 (1%)
Query: 48 NNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N IT I E T + +L + N +T + + LT+L L L+ N++ + L L+
Sbjct: 320 NQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSYNQITKIPEALAKLT 379
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
L L++ N++ +P + L + + NRI+ + L LT L ++ +NQIT
Sbjct: 380 NLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQITK 439
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ + L NL I L +N+IT + +L+ LT L LYLS+N++TE + + + L L
Sbjct: 440 I-PEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITE-IPEALAKLTNLT 497
Query: 227 TVDLSYNKINKF 238
++LS N+I K
Sbjct: 498 QLNLSDNQIIKI 509
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 47 NNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
N NI+ I E T + +L++ + +T + + LT+L L L +N++ + + L
Sbjct: 573 NYNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKL 632
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ L L++ NQ+ +P I + L L +N+IT + + LT L + +NQIT
Sbjct: 633 TNLTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQIT 692
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ + L NL + L +NQIT + +++ LT L L LS+N+++E L+
Sbjct: 693 EI-PEAIAKLTNLTQLILTSNQITEIPDAITKLTNLTQLDLSYNRISEIPLE 743
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 29 LTSDDLKGTPALITLL-------LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLR 80
LTS + P +I L L +N I I E T + +L + N +T + ++
Sbjct: 594 LTSSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQITEIPEAIA 653
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT+L L L +N++ + + L+ L L++ NQ+ +P I + L L +N+
Sbjct: 654 KLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQITEIPEAIAKLTNLTQLILTSNQ 713
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMV 167
IT + + LT L ++ +N+I+ +
Sbjct: 714 ITEIPDAITKLTNLTQLDLSYNRISEI 740
>gi|418688836|ref|ZP_13249971.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400361994|gb|EJP17947.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 333
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L G N +T+L+ + L +L LFLNNN+L +L ++G L LQ L + NQL L
Sbjct: 96 LQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ +L + L KLQ N+ NQ+ + + E L NL +
Sbjct: 156 PKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPK-EIAQLKNLQEL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NQ+ ++ + L KL LYL+ NQLT + ++I L+ L+ + LSYN+
Sbjct: 215 YLSENQLMTLPKEIGQLEKLQKLYLNANQLTT-IPNEIAQLQNLQVLFLSYNQ 266
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
Query: 40 LITLLLVNNN-ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L NN IT E A +++L++ N L +L + L L L L NN+L +L
Sbjct: 142 LQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITL 201
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L LQ L + +NQL LP +I +L LY N N++T++ + L LQV
Sbjct: 202 PKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLF 261
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ +NQ + EF L NL ++L NQ+T++ + L L LYL +NQ + +
Sbjct: 262 LSYNQFKTIPV-EFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIEEKER 320
Query: 219 IRGL 222
IR L
Sbjct: 321 IRKL 324
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT++ + L +L L +N++ +L ++G L L++L + NQL L
Sbjct: 73 LQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L NN++ +L + L LQ + NQ+ M E L L +
Sbjct: 133 PKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQL-MTLPKEIGQLEKLQEL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NNQ+ ++ ++ L L LYLS NQL L +I L++L+ + L+ N++
Sbjct: 192 NLWNNQLITLPKEIAQLKNLQELYLSENQLMT-LPKEIGQLEKLQKLYLNANQL 244
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +LK+L ++G L LQ L ++ NQL + +I+ L L
Sbjct: 40 LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N+IT+L + L L+V ++ NQ+T + + E L NL +++L NNQ+ ++
Sbjct: 100 DFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPK-EIGQLKNLQTLNLWNNQLITLPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L L LYLS NQL L +I L++L+ ++L N++
Sbjct: 159 IAQLKNLQELYLSENQLMT-LPKEIGQLEKLQELNLWNNQL 198
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L+ N+L ++ ++ L LQ+L NQ+
Sbjct: 47 PLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQI 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L +I L L+ NNN++T+L + L LQ N+ NQ+ + + E L NL
Sbjct: 107 TTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPK-EIAQLKNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+ ++ + L KL L L +NQL L +I LK L+ + LS N++
Sbjct: 166 QELYLSENQLMTLPKEIGQLEKLQELNLWNNQLIT-LPKEIAQLKNLQELYLSENQL 221
>gi|320165725|gb|EFW42624.1| hypothetical protein CAOG_07756 [Capsaspora owczarzaki ATCC 30864]
Length = 880
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 11/215 (5%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWL 88
+ G AL TL L NN I + NAF ++ L + N +T++ N+ GL+ LN L
Sbjct: 173 NAFSGLTALQTLYLYNNQIITVATNAFSGLAALQVLRLDTNQITTVPANAFSGLSKLNTL 232
Query: 89 FLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSL 144
LNNN L ++ T L+ L L ++ NQ+ +P++ FS L +L Y NN+IT++
Sbjct: 233 QLNNNWLSAIPSSAFTGLTALIQLRLDTNQITTVPANA--FSGLTALIYLYLYNNQITTV 290
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLA 202
G T L + NQIT + L L + L NNQITS+ + SGLT L
Sbjct: 291 ATNAFSGPTALVQLQLYGNQITTIPSSALTGLSALTQLYLYNNQITSVPANGFSGLTALT 350
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L LS+N +T L + GL +L +DLS N++
Sbjct: 351 DLRLSNNTITSILANAFTGLTKLTYLDLSLNQLTS 385
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 111/221 (50%), Gaps = 11/221 (4%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDL 85
++S G AL + L N IT + NAF T+ L + N L+++ +S GLT L
Sbjct: 74 ISSSAFTGLTALTYMRLDTNQITTVPANAFSGLSTLNTLQLNNNWLSAIPSSAFTGLTAL 133
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA----NNNR 140
L LNNN++ ++ T L+ LQ+L + NQ+ + I FS L +L NN
Sbjct: 134 IQLLLNNNQITTVPSSAFTGLTALQILYLHNNQIATV--AINAFSGLTALQTLYLYNNQI 191
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLT 199
IT GL LQV +D NQIT V + F L L+++ L NN ++++ +S+ +GLT
Sbjct: 192 ITVATNAFSGLAALQVLRLDTNQITTVPANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLT 251
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L L L NQ+T + GL L + L N+I T
Sbjct: 252 ALIQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVAT 292
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTS-LNNSLRGLTDLNW 87
S L G AL L L NN IT + N F + L + N +TS L N+ GLT L +
Sbjct: 316 SSALTGLSALTQLYLYNNQITSVPANGFSGLTALTDLRLSNNTITSILANAFTGLTKLTY 375
Query: 88 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITS 143
L L+ N+L S+ G L+ L L++ N L A+PS F+ L +L Y NNN+IT+
Sbjct: 376 LDLSLNQLTSIPAGAFSGLTALTQLLLFNNWLSAVPSSA--FTGLTALIYLYLNNNQITT 433
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKL 201
+ GLT L + NQIT + F L L + L +N+IT++ ++ +GLT L
Sbjct: 434 VAANAFTGLTALVQLQLYGNQITTIPASAFAGLSALVQLYLYSNRITAIFVNAFTGLTHL 493
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ L LS+NQ+T + GL + + L N ++
Sbjct: 494 SLLELSNNQITSLPANAFAGLTAMTQLSLYNNSLSA 529
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 115/217 (52%), Gaps = 13/217 (5%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNW 87
S G ALI L L NN IT + NAF + +L + N +T++ S GL+ L
Sbjct: 412 SSAFTGLTALIYLYLNNNQITTVAANAFTGLTALVQLQLYGNQITTIPASAFAGLSALVQ 471
Query: 88 LFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD----IQLFSQLGSLYANNNRIT 142
L+L +NR+ ++ T L+ L LL + NQ+ +LP++ + +QL SLY NN ++
Sbjct: 472 LYLYSNRITAIFVNAFTGLTHLSLLELSNNQITSLPANAFAGLTAMTQL-SLY--NNSLS 528
Query: 143 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 200
++ GLT LQ + NQIT V + F L L + L NQIT++ S+ +GL+
Sbjct: 529 AVPSSAFTGLTALQALYLYNNQITTVAANAFTGLTALVQLHLYRNQITTIPASAFAGLSA 588
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L LYL+ N++T + L +L +D+S N+I
Sbjct: 589 LVQLYLNSNRITTIFANAFPSLTKLTYLDISNNQITS 625
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 108/210 (51%), Gaps = 27/210 (12%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNW 87
++ G ALI L L NN IT + NAF P + +L + N +T++ +S L GL+ L
Sbjct: 268 ANAFSGLTALIYLYLYNNQITTVATNAFSGPTALVQLQLYGNQITTIPSSALTGLSALTQ 327
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS-LDG 146
L+L NN++ S+ + L AL +D++L +NN ITS L
Sbjct: 328 LYLYNNQITSVPAN------------GFSGLTAL-TDLRL---------SNNTITSILAN 365
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLY 205
GLTKL ++ NQ+T + F L L + L NN ++++ +S+ +GLT L YLY
Sbjct: 366 AFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLFNNWLSAVPSSAFTGLTALIYLY 425
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T + GL L + L N+I
Sbjct: 426 LNNNQITTVAANAFTGLTALVQLQLYGNQI 455
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 31/238 (13%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSL-NNSLRGLTDLNW 87
+ G AL+ L L +N IT I NAFP + L + N +TSL N+ GLT +
Sbjct: 580 ASAFAGLSALVQLYLNSNRITTIFANAFPSLTKLTYLDISNNQITSLPANAFTGLTAMTQ 639
Query: 88 LFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD----------IQLF-------- 128
L L NN ++ T L+ LQ L + NQ+ ++ ++ +QL+
Sbjct: 640 LHLYNNLFSTVPSSAFTGLTALQALFLFNNQISSVAANAFTSLTALIQLQLYGNLITTIP 699
Query: 129 -------SQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
S+L L NN ++++ GLT L +D NQIT V + F L L
Sbjct: 700 AGAFSGLSKLNLLQLYNNWLSAIPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIY 759
Query: 181 ISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+SL NQIT+++ S+ +GLT L LYL+ N +T + GL L +DLS ++I
Sbjct: 760 LSLYGNQITTISASAFAGLTALQALYLNDNTITTIAANAFAGLTALNWLDLSDSQITS 817
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 33/227 (14%)
Query: 47 NNNITHIHENAFP--PTIRKLHVGFNNL--TSLNNSLRGLTDLNWLFLNNNRLKSLE--- 99
NN IT + NAF + +LH+ +NNL T +++ GLT L LFL NN++ S+
Sbjct: 620 NNQITSLPANAFTGLTAMTQLHL-YNNLFSTVPSSAFTGLTALQALFLFNNQISSVAANA 678
Query: 100 ----------------------GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYA 136
G LSKL LL + N L A+PS + L L
Sbjct: 679 FTSLTALIQLQLYGNLITTIPAGAFSGLSKLNLLQLYNNWLSAIPSSAFTGLTALTQLRL 738
Query: 137 NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-S 194
+ N+IT++ GLT L ++ NQIT + F L L ++ L +N IT++ + +
Sbjct: 739 DTNQITTVPANAFSGLTALIYLSLYGNQITTISASAFAGLTALQALYLNDNTITTIAANA 798
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+GLT L +L LS +Q+T + L L ++L N ++ T
Sbjct: 799 FAGLTALNWLDLSDSQITSIPANVFSSLPALAQLNLYNNWLSAVPTS 845
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 15/216 (6%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL-NNSLRGLTDLNW 87
S G AL L L NN I+ + NAF + +L + N +T++ + GL+ LN
Sbjct: 652 SSAFTGLTALQALFLFNNQISSVAANAFTSLTALIQLQLYGNLITTIPAGAFSGLSKLNL 711
Query: 88 LFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLG-----SLYANNNRI 141
L L NN L ++ T L+ L L ++ NQ+ +P++ FS L SLY N +I
Sbjct: 712 LQLYNNWLSAIPSSAFTGLTALTQLRLDTNQITTVPANA--FSGLTALIYLSLYGN--QI 767
Query: 142 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 199
T++ GLT LQ ++ N IT + + F L L+ + L ++QITS+ +++ S L
Sbjct: 768 TTISASAFAGLTALQALYLNDNTITTIAANAFAGLTALNWLDLSDSQITSIPANVFSSLP 827
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LA L L +N L+ GL L + + N+I
Sbjct: 828 ALAQLNLYNNWLSAVPTSAFTGLTALTQLTMYGNRI 863
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
L ++ G A+ L L NN+++ + +AF GLT L L
Sbjct: 506 LPANAFAGLTAMTQLSLYNNSLSAVPSSAF---------------------TGLTALQAL 544
Query: 89 FLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDG 146
+L NN++ ++ T L+ L L + +NQ+ +P S S L LY N+NRIT++
Sbjct: 545 YLYNNQITTVAANAFTGLTALVQLHLYRNQITTIPASAFAGLSALVQLYLNSNRITTIFA 604
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 204
LTKL ++ NQIT + + F L + + L NN +++ +S+ +GLT L L
Sbjct: 605 NAFPSLTKLTYLDISNNQITSLPANAFTGLTAMTQLHLYNNLFSTVPSSAFTGLTALQAL 664
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +NQ++ + L L + L N I
Sbjct: 665 FLFNNQISSVAANAFTSLTALIQLQLYGNLI 695
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNW 87
++ G ALI L L N IT I +AF ++ L++ N +T++ N+ GLT LNW
Sbjct: 748 ANAFSGLTALIYLSLYGNQITTISASAFAGLTALQALYLNDNTITTIAANAFAGLTALNW 807
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DG 146
L L+++++ S I N +LP+ QL +LY NN ++++
Sbjct: 808 LDLSDSQITS---------------IPANVFSSLPALAQL-----NLY--NNWLSAVPTS 845
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
GLT L M N+IT + + F L+ L
Sbjct: 846 AFTGLTALTQLTMYGNRITTISANAFTGLNAL 877
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 179 DSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
++ LQ+NQITS++SS +GLT L Y+ L NQ+T + GL L T+ L+ N ++
Sbjct: 62 TTLYLQSNQITSISSSAFTGLTALTYMRLDTNQITTVPANAFSGLSTLNTLQLNNNWLSA 121
>gi|418680656|ref|ZP_13241900.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400327600|gb|EJO79845.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|455665929|gb|EMF31411.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 309
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L + L +L L+L +NRL +L ++ L LQ+L + NQL L
Sbjct: 72 LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I+ L LY +NR+T+L + L L+ ++ NQ+T + +
Sbjct: 132 PQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLY 191
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NNQ+T + + ++ L KL YLYLS NQL L +I
Sbjct: 192 LSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLIT-LPKEI 250
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+++DL N++
Sbjct: 251 EQLKNLKSLDLRNNQL 266
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +LK+L ++G L LQ L + NQL LP +I+ L L
Sbjct: 39 LTKALQNPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 98
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NR+T+L + L LQV ++ NQ+T++ + E + L NL + L++N++T+++
Sbjct: 99 YLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQ-EIEQLKNLQLLYLRSNRLTTLSKD 157
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L LS+NQLT L ++I LK L+++ LS N+ F
Sbjct: 158 IEQLQNLKSLDLSNNQLTT-LPNEIEQLKNLKSLYLSENQFATF 200
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LT+L+ + L +L L L+NN+L +L ++ L L+ L + +NQ P +
Sbjct: 144 LYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKE 203
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L+ NNN++T L + L KLQ + NQ+ + + E + L NL S+ L+
Sbjct: 204 IGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLITLPK-EIEQLKNLKSLDLR 262
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
NNQ+ ++ + + L L LYL++NQL+ + IR L
Sbjct: 263 NNQLKTLPNEIEQLKNLQTLYLNNNQLSSEEKEKIRKL 300
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+L L ++ L LQLL + N+L
Sbjct: 46 PLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L L +N++T L + L LQ+ + N++T + +D + L NL
Sbjct: 106 TTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKD-IEQLQNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ L NNQ+T++ + + L L LYLS NQ F +I L+ L+ + L+ N++
Sbjct: 165 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATF-PKEIGQLQNLKVLFLNNNQL 220
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 31 SDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
S D++ L +L L NN +T + +E ++ L++ N + + L +L LF
Sbjct: 155 SKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLF 214
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
LNNN+L L ++ L KLQ L + NQL LP +I+ L SL NN++ +L +
Sbjct: 215 LNNNQLTILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLRNNQLKTLPNEIE 274
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
L LQ ++ NQ++ +++ + L IS +
Sbjct: 275 QLKNLQTLYLNNNQLSSEEKEKIRKLIPKCQISFE 309
>gi|42527508|ref|NP_972606.1| internalin-like protein [Treponema denticola ATCC 35405]
gi|449111490|ref|ZP_21748084.1| hypothetical protein HMPREF9735_01133 [Treponema denticola ATCC
33521]
gi|449113697|ref|ZP_21750182.1| hypothetical protein HMPREF9721_00700 [Treponema denticola ATCC
35404]
gi|41818093|gb|AAS12517.1| internalin-related protein [Treponema denticola ATCC 35405]
gi|448958085|gb|EMB38823.1| hypothetical protein HMPREF9735_01133 [Treponema denticola ATCC
33521]
gi|448958155|gb|EMB38889.1| hypothetical protein HMPREF9721_00700 [Treponema denticola ATCC
35404]
Length = 424
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 21/217 (9%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
G++ LT+ D++G AL L +N I + ++ L+ N L+SL+ +R LT
Sbjct: 132 CGNNRLTALDIRGLTALRKLYCNSNEIASLDVRGLTA-LQTLYCDNNRLSSLD--VRHLT 188
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L WL + N+L SL+ Q L LQ+L NQL L D+Q L LY +N+ITS
Sbjct: 189 ALQWLDCHFNKLTSLDVQ--GLPALQVLECSDNQLTLL--DVQGLPALQKLYCQDNKITS 244
Query: 144 LDGLLRGLTKLQVFNMDFNQITM--VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
LD +RGLT LQV N++T VRR L L ++ +N I S++ + GLT L
Sbjct: 245 LD--VRGLTSLQVLMCYDNRLTALNVRR-----LTALQELNCSSNAIASID--VRGLTAL 295
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LY +N+LT D++GL L+ + S N++
Sbjct: 296 QVLYCDNNRLTSL---DVQGLTALQELACSDNQLTAL 329
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E+ L A + + L L L+ N++T+LD +RGLT LQ N +T + E
Sbjct: 68 EETVLTATGTKVVLKGALIELFCYANKLTALD--VRGLTALQELYCQDNMLTSLDIRELT 125
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
LH L NN++T+++ + GLT L LY + N++ D+RGL L+T+ N
Sbjct: 126 GLHTL---YCGNNRLTALD--IRGLTALRKLYCNSNEIASL---DVRGLTALQTLYCDNN 177
Query: 234 KINKFGTRN 242
+++ R+
Sbjct: 178 RLSSLDVRH 186
>gi|421118977|ref|ZP_15579304.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348317|gb|EKO99143.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 333
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L G N +T+L+ + L +L LFLNNN+L +L ++G L LQ L + NQL L
Sbjct: 96 LQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ +L + L KLQ N+ NQ+ + + E L NL +
Sbjct: 156 PKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPK-EIAQLKNLQEL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NQ+ ++ + L KL LYL+ NQLT + ++I L+ L+ + LSYN+
Sbjct: 215 YLSENQLMTLPKEIGQLEKLQKLYLNANQLTT-IPNEIAQLQNLQVLFLSYNQ 266
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
Query: 40 LITLLLVNNN-ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L NN IT E A +++L++ N L +L + L L L L NN+L +L
Sbjct: 142 LQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITL 201
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L LQ L + +NQL LP +I +L LY N N++T++ + L LQV
Sbjct: 202 PKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLF 261
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ +NQ + EF L NL ++L NQ+T++ + L L LYL +NQ + +
Sbjct: 262 LSYNQFKTIPV-EFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIEEKER 320
Query: 219 IRGL 222
IR L
Sbjct: 321 IRKL 324
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT++ + L +L L +N++ +L ++G L L++L + NQL L
Sbjct: 73 LQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L NN++ +L + L LQ + NQ+ M E L L +
Sbjct: 133 PKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQL-MTLPKEIGQLEKLQEL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NNQ+ ++ ++ L L LYLS NQL L +I L++L+ + L+ N++
Sbjct: 192 NLWNNQLITLPKEIAQLKNLQELYLSENQLMT-LPKEIGQLEKLQKLYLNANQL 244
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +LK+L ++G L LQ L ++ NQL + +I+ L L
Sbjct: 40 LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N+IT+L + L L+V ++ NQ+T + + E L NL +++L NNQ+ ++
Sbjct: 100 DFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPK-EIGQLKNLQTLNLWNNQLITLPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L L LYLS NQL L +I L++L+ ++L N++
Sbjct: 159 IAQLKNLQELYLSENQLMT-LPKEIGQLEKLQELNLWNNQL 198
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L+ N+L ++ ++ L LQ+L NQ+
Sbjct: 47 PLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQI 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L +I L L+ NNN++T+L + L LQ N+ NQ+ + + E L NL
Sbjct: 107 TTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPK-EIAQLKNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+ ++ + L KL L L +NQL L +I LK L+ + LS N++
Sbjct: 166 QELYLSENQLMTLPKEIGQLEKLQELNLWNNQLIT-LPKEIAQLKNLQELYLSENQL 221
>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 424
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L++N+L L ++ L LQ+L + NQL
Sbjct: 46 PLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L LY +NN++T+ + L KLQ N+ NQI + + E + L L
Sbjct: 106 TILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPK-EIEKLQKL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ L NNQ+T++ + L KL +LYLS+NQ+ + L +I L++L+ + L N++
Sbjct: 165 QSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQI-KTLPQEIEKLQKLQWLYLHKNQL 220
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L L WL+L+ N++K+L ++ L KLQ L + +NQL L
Sbjct: 164 LQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTL 223
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SL +NN++T+L + L L+V ++ NQ+T + + E +L NL +
Sbjct: 224 PQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQ-EIGHLQNLQDL 282
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L L L +NQLT L +I L+ L+ + LS N++
Sbjct: 283 YLVSNQLTTIPKEIGQLQNLQMLDLGNNQLT-ILPKEIGKLQNLQELYLSNNQL 335
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
P IR+L + N LT L + L +L L+L+NN+L + ++G L KLQ L
Sbjct: 85 LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 144
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ++ +P +I+ +L SLY NN++T+L + L KLQ + +NQI + + E
Sbjct: 145 NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQ-E 203
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+ L L + L NQ+T++ + L KL L L +NQLT L +I L+ L+ + L+
Sbjct: 204 IEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTT-LPQEIGQLQNLKVLFLN 262
Query: 232 YNKI 235
N++
Sbjct: 263 NNQL 266
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT++ + L +L L+L +N+L ++ ++G L LQ+L + NQL L
Sbjct: 256 LKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTIL 315
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T++ + L LQ + NQ+T + + E L NL +
Sbjct: 316 PKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPK-EIGQLQNLQEL 374
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+ ++ + L L LYL +NQ + + IR L
Sbjct: 375 YLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKL 415
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T I E ++ L +G N LT L + L +L L+L+NN+L ++ +
Sbjct: 282 LYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKE 341
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ L + NQL +P +I L LY +NN++ ++ + L LQ +
Sbjct: 342 IGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRN 401
Query: 162 NQITMVRRDEFQNL 175
NQ ++ ++ + L
Sbjct: 402 NQFSIEEKERIRKL 415
>gi|418668205|ref|ZP_13229608.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756062|gb|EKR17689.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 329
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N +T L +R L +L LFL+NN+L +L ++ L LQ L + N+L
Sbjct: 115 LQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQTLYLGNNRLTTF 174
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L LY +N++T L ++ L LQ+ ++ +NQ+T++ + E + L NL +
Sbjct: 175 PKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLTVLPK-EIEQLKNLQEL 233
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+L NQ+T + + L L LYL +NQLT L +I L+ L+ + L+ N++ +
Sbjct: 234 NLGYNQLTVLPKEIEQLKNLQTLYLGYNQLT-VLPKEIGQLQNLKVLFLNNNQLTTLPKK 292
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L NN++ L ++G L LQLL + NQL
Sbjct: 43 PLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQNLQLLGLYYNQL 102
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L +LY NN+IT L +R L L+V + NQ+T + + E + L NL
Sbjct: 103 TILPKEIEQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPK-EIEQLKNL 161
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L NN++T+ + L L LYL NQLT L +I+ LK L+ +DLSYN++
Sbjct: 162 QTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLT-VLPQEIKQLKNLQLLDLSYNQL 217
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N LT+ + L +L L+L +N+L L ++ L LQLL + NQL L
Sbjct: 161 LQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLTVL 220
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L N++T L + L LQ + +NQ+T++ + E L NL +
Sbjct: 221 PKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTVLPK-EIGQLQNLKVL 279
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L NNQ+T++ + L L LYL++NQL+
Sbjct: 280 FLNNNQLTTLPKKIGQLKNLQELYLNNNQLS 310
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + +N LT L + L +L L L N+L L ++ L LQ L + NQL LP +
Sbjct: 210 LDLSYNQLTVLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTVLPKE 269
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L+ NNN++T+L + L LQ ++ NQ+++ ++ Q L IS +
Sbjct: 270 IGQLQNLKVLFLNNNQLTTLPKKIGQLKNLQELYLNNNQLSIEEKERIQKLIPKCQISFE 329
>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 427
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L L +R L +L L L +N+L L ++ L LQ+L + NQL L
Sbjct: 52 LQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIILPKEIRQLKNLQMLDLRSNQLTIL 111
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ N+ NQI + + E + L L S+
Sbjct: 112 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPK-EIEKLQKLQSL 170
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L KL +LYLS+NQ+ + L +I L++L+ + L N++
Sbjct: 171 YLPNNQLTTLPQEIGKLQKLQWLYLSYNQI-KTLPQEIEKLQKLQWLYLHKNQL 223
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L L WL+L+ N++K+L ++ L KLQ L + +NQL L
Sbjct: 167 LQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SL +NN++T+L + L L+V ++ NQ+T + + E +L NL +
Sbjct: 227 PQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQ-EIGHLQNLQDL 285
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L L L +NQLT L +I L+ L+ + LS N++
Sbjct: 286 YLVSNQLTTIPKEIGQLQNLQMLDLGNNQLT-ILPKEIGKLQNLQELYLSNNQL 338
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
P IR+L + N LT L + L +L L+L+NN+L + ++G L KLQ L
Sbjct: 88 LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWL 147
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ++ +P +I+ +L SLY NN++T+L + L KLQ + +NQI + + E
Sbjct: 148 NLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQ-E 206
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+ L L + L NQ+T++ + L KL L L +NQLT L +I L+ L+ + L+
Sbjct: 207 IEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT-TLPQEIGQLQNLKVLFLN 265
Query: 232 YNKI 235
N++
Sbjct: 266 NNQL 269
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +LK+L ++G L LQ+L + NQL LP +I+ L L
Sbjct: 19 LTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQML 78
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ L +R L LQ+ ++ NQ+T++ + E L NL + L NNQ+T+
Sbjct: 79 DLRSNQLIILPKEIRQLKNLQMLDLRSNQLTILPK-EIGKLQNLQELYLSNNQLTTFPKE 137
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL +L LS NQ+ + + +I L++L+++ L N++
Sbjct: 138 IGKLQKLQWLNLSANQI-KTIPKEIEKLQKLQSLYLPNNQL 177
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT++ + L +L L+L +N+L ++ ++G L LQ+L + NQL L
Sbjct: 259 LKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTIL 318
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T++ + L LQ + NQ+T + + E L NL +
Sbjct: 319 PKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPK-EIGQLQNLQEL 377
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+ ++ + L L LYL +NQ + + IR L
Sbjct: 378 YLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKL 418
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T I E ++ L +G N LT L + L +L L+L+NN+L ++ +
Sbjct: 285 LYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKE 344
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ L + NQL +P +I L LY +NN++ ++ + L LQ +
Sbjct: 345 IGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRN 404
Query: 162 NQITMVRRDEFQNL 175
NQ ++ ++ + L
Sbjct: 405 NQFSIEEKERIRKL 418
>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 377
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++G N LT+L N + L +L L L +N+ K++ ++G L LQ L + NQL AL
Sbjct: 117 LKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTAL 176
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L SLY +N++T+L + L LQ + N++T + +E L NL S+
Sbjct: 177 PNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTL-PNEIGQLQNLQSL 235
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T + + + L L LYL +NQ T L +I L+ L+ ++L+YN++
Sbjct: 236 YLGSNQLTILPNEIGQLKNLQTLYLRYNQFTT-LPKEIGKLQNLQRLELNYNQL 288
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 50 ITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
+TH P I + L++G+N LT+L N + L +L L+L +N+L +L ++G
Sbjct: 145 LTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIG 204
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L LQ L + N+L LP++I L SLY +N++T L + L LQ + +NQ
Sbjct: 205 QLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQ 264
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
T + + E L NL + L NQ+ ++ + L L +L L +NQ T L ++I LK
Sbjct: 265 FTTLPK-EIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFT-ILPEEIGKLK 322
Query: 224 RLRTVDLSYNKI 235
L+ + L N++
Sbjct: 323 NLQELYLRDNQL 334
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 22/183 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N LT+L N + L +L L+L+ NRL +L ++G L LQ L + NQL L
Sbjct: 186 LQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTIL 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR------------ 169
P++I L +LY N+ T+L + L LQ +++NQ+ + +
Sbjct: 246 PNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLD 305
Query: 170 ----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+E L NL + L++NQ+T++ + L L LYL NQL+ + I
Sbjct: 306 LGYNQFTILPEEIGKLKNLQELYLRDNQLTTIPEEIGQLQNLQELYLRDNQLSSEEKERI 365
Query: 220 RGL 222
R L
Sbjct: 366 RKL 368
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N +L + L +L L LN N+L L ++G L L+ L + NQ
Sbjct: 45 PLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQF 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +++ L LY +N++T+L + L L+V + NQ + + E L NL
Sbjct: 105 TILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L NQ+T++ + + L L LYL NQLT L ++I L+ L+++ LS N++
Sbjct: 164 QTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTA-LPNEIGQLQNLQSLYLSTNRL 219
>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 374
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 50 ITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
+TH P I + L++G N LT+L N + L +L L L +NRL +L ++G
Sbjct: 143 LTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIG 202
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L KLQ L + N+L LP++I L LY +N++T L + L LQ + N+
Sbjct: 203 QLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNR 262
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+T + +D + L NL S+ L NNQ+T+ + L L L L NQLT L ++I LK
Sbjct: 263 LTTLSKD-IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTT-LPEEIEQLK 320
Query: 224 RLRTVDLSYNKI 235
L+ +DL N++
Sbjct: 321 NLQVLDLGSNQL 332
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 11/196 (5%)
Query: 52 HIHENAF---PPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++H+N F P + KL +G N LT+L N + L +L L L +N+ K++ ++
Sbjct: 96 NLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEI 155
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL ALP++I L SL +NR+T+L + L KLQ + N
Sbjct: 156 GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTN 215
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
++T + +E L NL + L +NQ+T + + + L L LYL N+LT L DI L
Sbjct: 216 RLTTL-PNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTT-LSKDIEQL 273
Query: 223 KRLRTVDLSYNKINKF 238
+ L+++DL N++ F
Sbjct: 274 QNLKSLDLWNNQLTTF 289
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
LT + K P I TL L NN +T + +E ++ L +G N LT+L N +
Sbjct: 143 LTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIG 202
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L L L+L+ NRL +L ++G L LQ L + NQL LP++I L +LY +NR
Sbjct: 203 QLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNR 262
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+T+L + L L+ ++ NQ+T + E + L NL + L +NQ+T++ + L
Sbjct: 263 LTTLSKDIEQLQNLKSLDLWNNQLTTFPK-EIEQLKNLQVLDLGSNQLTTLPEEIEQLKN 321
Query: 201 LAYLYLSHNQLT 212
L L L NQLT
Sbjct: 322 LQVLDLGSNQLT 333
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N +L + L +L L LN N+L L ++G L L+ L + NQ
Sbjct: 43 PLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQF 102
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +++ L L +NR+T+L + L L+V + NQ + + E L NL
Sbjct: 103 TILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPK-EIGQLKNL 161
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L NNQ+T++ + + L L L L N+LT L ++I L++L+ + LS N++
Sbjct: 162 QTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTT-LPNEIGQLQKLQDLYLSTNRL 217
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +++ D+ L L+ NR K+L ++G L LQ L + +NQL LP +I L L
Sbjct: 36 LTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL 95
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
++N+ T L + L L+ ++ N++T + +E L NL + L +NQ ++
Sbjct: 96 NLHDNQFTILPKEVEKLENLKELSLGSNRLTTL-PNEIGQLKNLRVLKLTHNQFKTIPKE 154
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +NQLT L ++I L+ L+++DL N++
Sbjct: 155 IGQLKNLQTLNLGNNQLTA-LPNEIGQLQNLKSLDLGSNRL 194
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 25/161 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N LT L N + L +L L+L +NR L TLSK
Sbjct: 230 LQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNR-------LTTLSK-------------- 268
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
DI+ L SL NN++T+ + L LQV ++ NQ+T + +E + L NL +
Sbjct: 269 --DIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTL-PEEIEQLKNLQVL 325
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L +NQ+T++ + L L LYL++NQL+ + IR L
Sbjct: 326 DLGSNQLTTLPEGIGQLQNLQ-LYLNNNQLSSEEKERIRKL 365
>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
Length = 1263
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 47/249 (18%)
Query: 33 DLKGTPALITLLLVNNNITHIHE------------------NAFPPTI------RKLHVG 68
D G P+L TL+L N++ + + PP+I ++L +
Sbjct: 156 DSLGAPSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLT 215
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
N L L S+ + L L+L N+L++L +G LS+LQ L + N LE LP+ +
Sbjct: 216 GNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADL 275
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM---------------VRR---- 169
S+L L +N +T + + L L ++ +N++T V R
Sbjct: 276 SRLTELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLH 335
Query: 170 ---DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
D F L NLD+++L N +TS+ SS+ L +L +L L++ L E L + GL RL
Sbjct: 336 DLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDL-ETLPAGLGGLHRLE 394
Query: 227 TVDLSYNKI 235
T+DL N +
Sbjct: 395 TLDLVGNNL 403
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 2/198 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+L L L N + + ++ P++ L + N+L L + + L L ++N L L
Sbjct: 140 SLTQLYLQKNQLPGLPDSLGAPSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTEL 199
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+G L +LQ L + N+L LP+ I + L LY N++ +L + L++LQ
Sbjct: 200 PPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLA 259
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N + + +L L ++L +N +T + ++ L L L L++N+LTE L
Sbjct: 260 LSGNHLEELPA-SVADLSRLTELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTE-LPPS 317
Query: 219 IRGLKRLRTVDLSYNKIN 236
+ L+ L +D+S N ++
Sbjct: 318 LGALRVLTALDVSRNSLH 335
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
G ++T L V+ N H ++F + L++ N LTSL +S+ L L WL L
Sbjct: 319 GALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYC 378
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
L++L LG L +L+ L + N L LP L GL
Sbjct: 379 DLETLPAGLGGLHRLETLDLVGNNLRDLPFQ-----------------------LSGLGA 415
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L N+ NQ++ V R L NL ++ L +N+++S+ +L GL L L ++ NQLT
Sbjct: 416 LTTLNLASNQLSWVPR-TLGLLRNLVNLDLADNELSSLPRALGGLESLRKLDVAENQLT- 473
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
++ + L +L T+ L N++ T N
Sbjct: 474 WIPRSVCDLPKLETLVLRGNRLADLPTSN 502
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 81/199 (40%), Gaps = 24/199 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L + N L + L L L L N L +L + L +L L +++N AL
Sbjct: 72 LRRLWLDSNGFGELPPQVALLGGLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTAL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI-----------TMVRRD 170
P + S L LY N++ L L G L +D N + ++V
Sbjct: 132 PEVVGHLSSLTQLYLQKNQLPGLPDSL-GAPSLHTLVLDGNHLAELPDWIGDTQSLVALS 190
Query: 171 EFQN-----------LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
N L L +SL N++ + +S+ + L LYL NQL + L I
Sbjct: 191 ADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQL-QTLPASI 249
Query: 220 RGLKRLRTVDLSYNKINKF 238
L L+T+ LS N + +
Sbjct: 250 GNLSELQTLALSGNHLEEL 268
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 88 LFLNNNRLKSLEGQLGTLSKL---QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+N L L + G L +L L + N+L LP + + L L+ ++N L
Sbjct: 26 LDLSNLGLTGLPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGEL 85
Query: 145 D---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
LL GL +L ++ N +T + +EF L L S+ L N T++ + L+ L
Sbjct: 86 PPQVALLGGLVEL---SLTGNGLTTL-PEEFARLERLTSLWLDENAFTALPEVVGHLSSL 141
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LYL NQL L D G L T+ L N +
Sbjct: 142 TQLYLQKNQLPG--LPDSLGAPSLHTLVLDGNHL 173
>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 664
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +L + L +L WL LNNN+L +L ++G L KL+ L +E NQL L
Sbjct: 308 LQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL 367
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L +NN++T+L + L LQ +++ NQ+T + + E L NL +
Sbjct: 368 PKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPK-EIGKLQNLQEL 426
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++T++ + L KL LY S NQ T + ++I L+ L+ ++L N++
Sbjct: 427 RLDYNRLTTLPEEIEKLQKLKKLYSSGNQFT-TVPEEIWNLQNLQALNLYSNQL 479
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++G N LT+L + L L L+L +N+ +L +G L KLQ L + NQL LP +
Sbjct: 242 LNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKE 301
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I+ +L LY +NR+ +L + L LQ ++ NQ+T + + E L L+++ L+
Sbjct: 302 IEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPK-EIGKLQKLEALHLE 360
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NNQ+T++ + L L +L LS+NQLT L +I L+ L+ + L N++
Sbjct: 361 NNQLTTLPKEIGKLQNLQWLGLSNNQLT-TLPKEIGKLQHLQELHLENNQL 410
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 5/182 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L +G N LT+L + L L L+L +NRL +L ++ L LQ L + NQL L
Sbjct: 285 LQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTL 344
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L +L+ NN++T+L + L LQ + NQ+T + + E L +L +
Sbjct: 345 PKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPK-EIGKLQHLQEL 403
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L+NNQ+T++ + L L L L +N+LT L ++I L++L+ + Y+ N+F T
Sbjct: 404 HLENNQLTTLPKEIGKLQNLQELRLDYNRLT-TLPEEIEKLQKLKKL---YSSGNQFTTV 459
Query: 242 NE 243
E
Sbjct: 460 PE 461
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LTSL + L +L L+L++N+L +L ++G L LQLL + NQL L
Sbjct: 469 LQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTL 528
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T+L + L LQV N++ N++T + + E NL NL +
Sbjct: 529 PKEIGKLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPK-EIGNLQNLQVL 587
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+L +N++T++ + L L L+L +NQLT L ++I L+ L+ +DL N
Sbjct: 588 NLNHNRLTTLPEEIGKLQNLQLLHLDNNQLT-TLPEEIGKLQNLKELDLVGN 638
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N L +L + L +L L L NRL +L ++G L LQ+L + NQL L
Sbjct: 193 LQKLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTL 252
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR------------ 169
P +I +L LY +N+ +L + L KLQ ++ NQ+T + +
Sbjct: 253 PKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLY 312
Query: 170 ----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+E + L NL + L NNQ+T++ + L KL L+L +NQLT L +I
Sbjct: 313 LYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLT-TLPKEI 371
Query: 220 RGLKRLRTVDLSYNKI 235
L+ L+ + LS N++
Sbjct: 372 GKLQNLQWLGLSNNQL 387
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 23/188 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L L L L NN+L +L ++G L LQ L ++ N+L LP +I+
Sbjct: 385 NQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQ 444
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
+L LY++ N+ T++ + L LQ N+ NQ+T + ++
Sbjct: 445 KLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLAT 504
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL + L +NQ+T++ + L L LYL NQLT L +I L+ L+
Sbjct: 505 LPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLT-TLPKEIGNLQNLQV 563
Query: 228 VDLSYNKI 235
++L++N++
Sbjct: 564 LNLNHNRL 571
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L L++N+L L ++G L LQ L + +N+L LP +I L
Sbjct: 157 LWTLPKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNL 216
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L+ NR+ +L + L LQ+ N+ NQ+T + + E NL L + L +NQ ++
Sbjct: 217 QELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPK-EIGNLQKLQELYLGDNQFATL 275
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L KL L L NQLT L +I L++L+ + L N++
Sbjct: 276 PKAIGKLQKLQELDLGINQLT-TLPKEIEKLQKLQQLYLYSNRL 318
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 57 AFPPTIRKLHVG-FNNLTSLNNSLRGLTDLNWLFL-------NNNRLKSLEGQLGTLSKL 108
F TI G + NLT +L+ TD+ +L L +N+ L +L ++G L L
Sbjct: 114 CFCCTIEAKEKGVYYNLTE---ALQHPTDIQYLDLGPRERKNSNDPLWTLPKEIGKLQNL 170
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L + NQL LP +I L L NR+ +L + L LQ ++ N++ +
Sbjct: 171 RDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANL- 229
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+E L NL ++L NQ+T++ + L KL LYL NQ L I L++L+ +
Sbjct: 230 PEEIGKLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFA-TLPKAIGKLQKLQEL 288
Query: 229 DLSYNKI 235
DL N++
Sbjct: 289 DLGINQL 295
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 65/114 (57%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L LN+NRL +L ++G L LQ+L + N+L L
Sbjct: 538 LQELYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRLTTL 597
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L+ +NN++T+L + L L+ ++ N + ++++ Q L
Sbjct: 598 PEEIGKLQNLQLLHLDNNQLTTLPEEIGKLQNLKELDLVGNPSLIGQKEKIQKL 651
>gi|124002073|ref|ZP_01686927.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123992539|gb|EAY31884.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 506
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 88/160 (55%), Gaps = 7/160 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP + KL + N LT L + LT L L++ +NRL +L ++G L++LQ L
Sbjct: 120 LPPEVGALTNLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKL 179
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N+L ALP++I +QL L +N++T+L + GLT L+ +D NQ T + E
Sbjct: 180 ELAVNRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTL-PTE 238
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NL + + +NQ+ ++ S + LT L LY+ NQL
Sbjct: 239 IGTLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQL 278
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL VG N LT+L + GLT L L+++NN+ +L ++GTLS L+ L + NQL L
Sbjct: 199 LKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATL 258
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS+I + L LY N++ +L + L LQ+ ++ NQ++ + E + +L +
Sbjct: 259 PSEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSEL-PTEIGLVGDLRIL 317
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L+ N +T++ +++ L L L + N L L +I LK L T+D+S+NK++ F
Sbjct: 318 CLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPL-EIDSLKNLHTLDISFNKLSTF 373
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 49 NITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ H + P I +KL LT L + LT+L L LN N L L ++
Sbjct: 88 NLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPAEI 147
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L+KLQ L I N+L AL ++I +QL L NR+ +L + LT+L+ + N
Sbjct: 148 GNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQLKKLEVGSN 207
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
Q+T + E L +L+ + + NNQ T++ + + L+ L +LY+S NQL
Sbjct: 208 QLTTLPA-EISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLA 256
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL++ + +++ L + GLT L L L L ++G L+ L L + +N+L LP+
Sbjct: 86 KLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPA 145
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I ++L LY +NR+++L + LT+LQ + N++ + E L L + +
Sbjct: 146 EIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPA-EIGKLTQLKKLEV 204
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+NQ+T++ + +SGLT L LY+ +NQ T L +I L L+ + +S N++
Sbjct: 205 GSNQLTTLPAEISGLTSLEELYIDNNQFTT-LPTEIGTLSNLKFLYVSDNQL 255
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 27/233 (11%)
Query: 1 MSRFSYFEDGHAVALNLIDLEPETGSHP------LTSDDLKGTPALITLLLVNNNITHIH 54
++ ++ + +A+ L L PE G+ L ++L PA I N+T +
Sbjct: 101 IAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPAEI------GNLTKLQ 154
Query: 55 ENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE 114
E L++ N L++L+ + LT L L L NRL +L ++G L++L+ L +
Sbjct: 155 E---------LYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQLKKLEVG 205
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
NQL LP++I + L LY +NN+ T+L + L+ L+ + NQ+ + E N
Sbjct: 206 SNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATL-PSEIGN 264
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF-----LLDDIRGL 222
L L + ++ NQ+ ++ + + L L L+L NQL+E L+ D+R L
Sbjct: 265 LTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRIL 317
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ +L + N+L +L + L +L+ L ++ N+L + Q+ L LQ L + +N L
Sbjct: 336 CLEELRIWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTD 395
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I +L L N +TSL L L KLQ ++ +N++ ++ + F L NL
Sbjct: 396 LPDEINQLVKLEELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELEVLPSEVFA-LSNLQE 454
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
++L N +T++ ++ L KL YLYL H ++E L+ ++ +
Sbjct: 455 LNLMGNYLTTIPVEITKLKKLQYLYLQHGLISEQELERVKKM 496
>gi|320169649|gb|EFW46548.1| non-receptor protein kinase, partial [Capsaspora owczarzaki ATCC
30864]
Length = 1380
Score = 84.3 bits (207), Expect = 4e-14, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+++D L G AL L L NN IT I NAF + L++ +N L S++ N+L GLT L
Sbjct: 10 ISADALTGLTALQYLSLNNNRITRISANAFTGLTALTVLYLSYNELPSISANALAGLTAL 69
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
+L LNNN++ S+ L LP D NN+ITS+
Sbjct: 70 QYLSLNNNQITSIAAAAFA---------GLTALTHLPLD-------------NNQITSIS 107
Query: 146 G-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 203
GL+ LQ+ +++ NQIT + + F L+ L S+ L N I +++ + +GLTKL
Sbjct: 108 AEAFTGLSALQLLSLNSNQITSIAANAFTGLNALTSLYLNQNNIAGISANAFTGLTKLTQ 167
Query: 204 LYLSHNQLTEFLLDDIRGLKRL 225
LYL N T +GL +L
Sbjct: 168 LYLDDNPFTTLPPGLFKGLPKL 189
Score = 79.7 bits (195), Expect = 9e-13, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 70 NNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQ 126
N L+S++ ++L GLT L +L LNNNR+ + T L+ L +L + N+L ++ ++ +
Sbjct: 5 NQLSSISADALTGLTALQYLSLNNNRITRISANAFTGLTALTVLYLSYNELPSISANALA 64
Query: 127 LFSQLGSLYANNNRITSLDGLLR-GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+ L L NNN+ITS+ GLT L +D NQIT + + F L L +SL +
Sbjct: 65 GLTALQYLSLNNNQITSIAAAAFAGLTALTHLPLDNNQITSISAEAFTGLSALQLLSLNS 124
Query: 186 NQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
NQITS+ + + +GL L LYL+ N + + GL +L + L N
Sbjct: 125 NQITSIAANAFTGLNALTSLYLNQNNIAGISANAFTGLTKLTQLYLDDN 173
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 183 LQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ++S+++ +L+GLT L YL L++N++T + GL L + LSYN++
Sbjct: 2 LVQNQLSSISADALTGLTALQYLSLNNNRITRISANAFTGLTALTVLYLSYNEL 55
>gi|195391504|ref|XP_002054400.1| GJ22826 [Drosophila virilis]
gi|261277888|sp|B4LXW1.1|SUR8_DROVI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|194152486|gb|EDW67920.1| GJ22826 [Drosophila virilis]
Length = 614
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 2/212 (0%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
T HP ++ T ++ + + ++ + I++L + +++T L N++R
Sbjct: 97 TVKHPESNKPKPTTKKIVKNIQADQDVIKALQRCRDEGIKRLDLSKSSITVLPNTVRECV 156
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L L+L +N++ L ++G L L+ L + +N L +LP ++ +QL L +N++
Sbjct: 157 HLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNKLAE 216
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ ++ L L + FN+IT V D+ + L NL +SL+ N+I + S++ L L
Sbjct: 217 IPSVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTMLSLRENKIKELGSAIGALVNLTT 275
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +SHN L E L DDI L +DL +N++
Sbjct: 276 LDVSHNHL-EHLPDDIGNCVNLSALDLQHNEL 306
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++ FN +T++ + LR L +L L L N++K L +G L L L + N LE
Sbjct: 226 SLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEH 285
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP DI L +L +N + + + L L + +N++ V +N ++D
Sbjct: 286 LPDDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLNSVPIS-LKNCKSMDE 344
Query: 181 ISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+++ N IT + + L+ L+ L + LS NQ T + + +++L +N+I+K
Sbjct: 345 FNVEGNGITQLPDGMLASLSALTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKI 403
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L KL++L +E+N++E LP
Sbjct: 439 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 498
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 499 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLSNLTHLSV 534
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
N + + + L L LY++ N E L
Sbjct: 535 SENNLQFLPEEIGSLESLENLYINQNPGLEKL 566
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L S+ SL+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 318 SLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGITQLPDGMLASLSALTTITLSRNQFT 377
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 378 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-VGT 433
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L++LR +DL N+
Sbjct: 434 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRKLRILDLEENR 492
Query: 235 I 235
I
Sbjct: 493 I 493
>gi|456822602|gb|EMF71072.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 237
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 99/189 (52%), Gaps = 16/189 (8%)
Query: 48 NNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
N+T +N P ++ L + N L +L + L +L WL L+ N+LK+L ++ L K
Sbjct: 30 QNLTKALKN--PTDVQTLDLSNNKLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQK 87
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L + NQL LP +I +L L + N++T+L + L +LQV ++ NQ+T +
Sbjct: 88 LRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNNQLTTL 147
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT-------------EF 214
+E + L L + L+NNQ+T++ + L KL L LS NQLT E
Sbjct: 148 -PNEIEFLKRLQELYLRNNQLTTLPKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEEL 206
Query: 215 LLDDIRGLK 223
LDDI LK
Sbjct: 207 FLDDIPVLK 215
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 25/151 (16%)
Query: 108 LQLLVIEQNQLEA-----------------------LPSDIQLFSQLGSLYANNNRITSL 144
+Q L + N+L LP +I+ +L LY ++N++T+L
Sbjct: 42 VQTLDLSNNKLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQLTTL 101
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ L +LQ ++ NQ+T + + E L L + L NNQ+T++ + + L +L L
Sbjct: 102 PKEIGYLKELQELDLSRNQLTTLPK-EIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQEL 160
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
YL +NQLT L I LK+L+ +DLS N++
Sbjct: 161 YLRNNQLT-TLPKGIGYLKKLQKLDLSRNQL 190
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 29 LTSDDLKGTPALIT-------LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
L+ + LK P I L L +N +T + E + +++L + N LT+L +
Sbjct: 70 LSKNQLKTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIG 129
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L +L L L+NN+L +L ++ L +LQ L + NQL LP I +L L + N+
Sbjct: 130 QLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKKLQKLDLSRNQ 189
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+T+L + L KL+ +D + + + Q L
Sbjct: 190 LTTLPKEIETLKKLEELFLDDIPVLKSQEKKIQKL 224
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 115 QNQLEAL--PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
QN +AL P+D+Q +L +NN++ +L + L +L+ ++ NQ+ + + E
Sbjct: 30 QNLTKALKNPTDVQ------TLDLSNNKLITLPKEIGQLKELEWLSLSKNQLKTLPK-EI 82
Query: 173 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
+ L L + L +NQ+T++ + L +L L LS NQLT L +I LK L+ +DLS
Sbjct: 83 EQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLT-TLPKEIGQLKELQVLDLSN 141
Query: 233 NKI 235
N++
Sbjct: 142 NQL 144
>gi|428173790|gb|EKX42690.1| hypothetical protein GUITHDRAFT_73681, partial [Guillardia theta
CCMP2712]
Length = 439
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 7/214 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
++SD +G P L L L +N ++ + E F ++ L + N +TSL +N+ GL+ L
Sbjct: 129 ISSDAFRGLPGLKYLGLFDNQLSSLSEGVFSGLSGLQILSLYNNRVTSLPSNAFSGLSVL 188
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITS 143
L LNNN++ + LS L+ L + NQL +LPS+ S L L + NRI+S
Sbjct: 189 QELDLNNNQISDISLSAFNGLSGLKTLNLNSNQLSSLPSNAFFGLSALQQLQLDGNRISS 248
Query: 144 LD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GL+ L+ +M FNQ+ V F L L + +QNNQI+S++S + +GLT L
Sbjct: 249 ISMDAFDGLSALEELHMSFNQLQTVLSSNFNGLSALKLLDIQNNQISSISSGAFNGLTAL 308
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L+ N+LT GL+ L ++ LS N++
Sbjct: 309 TSLSLNGNKLTSIPAGVFDGLQYLESLILSSNQL 342
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
L D G+ +L TL L +N IT+I +AF RGL L +L
Sbjct: 105 LPPDSFNGSSSLQTLSLFSNKITNISSDAF---------------------RGLPGLKYL 143
Query: 89 FLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD- 145
L +N+L SL EG LS LQ+L + N++ +LPS+ S L L NNN+I+ +
Sbjct: 144 GLFDNQLSSLSEGVFSGLSGLQILSLYNNRVTSLPSNAFSGLSVLQELDLNNNQISDISL 203
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYL 204
GL+ L+ N++ NQ++ + + F L L + L N+I+S++ + GL+ L L
Sbjct: 204 SAFNGLSGLKTLNLNSNQLSSLPSNAFFGLSALQQLQLDGNRISSISMDAFDGLSALEEL 263
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
++S NQL L + GL L+ +D+ N+I+ +
Sbjct: 264 HMSFNQLQTVLSSNFNGLSALKLLDIQNNQISSISS 299
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Query: 81 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 138
GL+ L L L+NNRL SL EG LS LQ L + N L LPS++ S L LY +N
Sbjct: 16 GLSSLQTLELSNNRLSSLSEGVFSGLSALQFLQLHHNALLNLPSNVFDGLSSLQQLYVHN 75
Query: 139 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLS 196
N +++L +GL LQ ++ +NQ++ + D F +L ++SL +N+IT+++S +
Sbjct: 76 NVLSTLGPNTFKGLASLQNLDLSYNQLSTLPPDSFNGSSSLQTLSLFSNKITNISSDAFR 135
Query: 197 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
GL L YL L NQL+ GL L+ + L N++
Sbjct: 136 GLPGLKYLGLFDNQLSSLSEGVFSGLSGLQILSLYNNRV 174
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 114/209 (54%), Gaps = 9/209 (4%)
Query: 36 GTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G L TL L +N ++ + NAF +++L + N ++S++ ++ GL+ L L ++
Sbjct: 208 GLSGLKTLNLNSNQLSSLPSNAFFGLSALQQLQLDGNRISSISMDAFDGLSALEELHMSF 267
Query: 93 NRLKS-LEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLR 149
N+L++ L LS L+LL I+ NQ+ ++ S + L SL N N++TS+ G+
Sbjct: 268 NQLQTVLSSNFNGLSALKLLDIQNNQISSISSGAFNGLTALTSLSLNGNKLTSIPAGVFD 327
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLH--NLDSISLQNNQITSMN-SSLSGLTKLAYLYL 206
GL L+ + NQ+ + + F +L NL+ + L NQ+TS+ +GL+KL L L
Sbjct: 328 GLQYLESLILSSNQLECISSNAFASLLFLNLEELYLSYNQLTSLPLGVFNGLSKLVTLTL 387
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+N + E GL L+ ++L +N++
Sbjct: 388 SNNHVKELPAGVFNGLSSLKFLNLGHNEL 416
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 13/217 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNL-TSLNNSLRGLTDL 85
L S+ G AL L L N I+ I +AF + +LH+ FN L T L+++ GL+ L
Sbjct: 225 LPSNAFFGLSALQQLQLDGNRISSISMDAFDGLSALEELHMSFNQLQTVLSSNFNGLSAL 284
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITS 143
L + NN++ S+ G L+ L L + N+L ++P+ + L SL ++N++
Sbjct: 285 KLLDIQNNQISSISSGAFNGLTALTSLSLNGNKLTSIPAGVFDGLQYLESLILSSNQLEC 344
Query: 144 LDGLLRGLTKLQVFNMD-----FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SG 197
+ L N++ +NQ+T + F L L +++L NN + + + + +G
Sbjct: 345 ISS--NAFASLLFLNLEELYLSYNQLTSLPLGVFNGLSKLVTLTLSNNHVKELPAGVFNG 402
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L+ L +L L HN+L L+ GL L V L +N+
Sbjct: 403 LSSLKFLNLGHNELESLPLNLFDGLTSLEQVTLEWNQ 439
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 141 ITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGL 198
+TSL G+ GL+ LQ + N+++ + F L L + L +N + ++ S++ GL
Sbjct: 6 LTSLPLGVFNGLSSLQTLELSNNRLSSLSEGVFSGLSALQFLQLHHNALLNLPSNVFDGL 65
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L LY+ +N L+ + +GL L+ +DLSYN++
Sbjct: 66 SSLQQLYVHNNVLSTLGPNTFKGLASLQNLDLSYNQL 102
>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 474
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 23/191 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N T+L + L +L L+L NN+L L ++G L LQ+L + NQL L
Sbjct: 280 LQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTL 339
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQN----- 174
P +I L LY +NN++T+L + L LQV + NQ+T + ++ + QN
Sbjct: 340 PKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLY 399
Query: 175 ---------------LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
L NL + L NNQ+T++ + + L L LYLS+N+L + L D+I
Sbjct: 400 LSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNKL-KTLPDEI 458
Query: 220 RGLKRLRTVDL 230
L++LRT+DL
Sbjct: 459 GKLQKLRTLDL 469
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ +NN T+L + L +L L L NN+LK+L + L LQ+L + NQL+ LP D
Sbjct: 122 LHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKD 181
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L NN++T L + L LQV ++ NQ+T + +D +L L + L
Sbjct: 182 IGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKD-IGHLKELQDLDLS 240
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+N++T++ + L L L LS NQLT L DI LK L+ + L N+
Sbjct: 241 HNKLTALPKDIGKLQNLQVLDLSGNQLTT-LPKDIGYLKELQVLHLEDNQ 289
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE 114
E + ++KL + N L +L + L L LN N +L ++G L +LQ L +
Sbjct: 89 EIGYLKELQKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELY 148
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
NQL+ LP DI+ L L NN++ +L + L LQV + N++T++ + E
Sbjct: 149 NNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSK-EIGK 207
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NL + L NNQ+T++ + L +L L LSHN+LT L DI L+ L+ +DLS N+
Sbjct: 208 LQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTA-LPKDIGKLQNLQVLDLSGNQ 266
Query: 235 I 235
+
Sbjct: 267 L 267
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L L NN+L L ++G L LQ+L + NQL LP DI
Sbjct: 173 NQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLK 232
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L ++N++T+L + L LQV ++ NQ+T + +D L L + L++NQ T
Sbjct: 233 ELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKD-IGYLKELQVLHLEDNQFT 291
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ + L L LYL +NQLT L +I L+ L+ + L N++
Sbjct: 292 TLPKEIGQLQNLRVLYLYNNQLT-ILPKEIGKLQNLQVLYLHSNQL 336
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 27/210 (12%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P + L + N LT+L + L L L L NR+ +L ++G L +L
Sbjct: 39 NLTEALQN--PTDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKEL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYAN-----------------------NNRITSLD 145
Q L + NQL+ LP DI+ + L+ N NN++ +L
Sbjct: 97 QKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLP 156
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
+ L LQV N+ NQ+ + +D L NL + L NN++T ++ + L L L
Sbjct: 157 KDIERLQNLQVLNLTNNQLKTLPKD-IGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLD 215
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQLT L DI LK L+ +DLS+NK+
Sbjct: 216 LTNNQLTT-LPKDIGHLKELQDLDLSHNKL 244
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 50 ITHIHENAF---PPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG 100
+ H++ N F P I KL + N L +L + L +L L L NN+LK+L
Sbjct: 121 VLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQVLNLTNNQLKTLPK 180
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
+G L LQ+L + N+L L +I L L NN++T+L + L +LQ ++
Sbjct: 181 DIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLS 240
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N++T + +D L NL + L NQ+T++ + L +L L+L NQ T L +I
Sbjct: 241 HNKLTALPKD-IGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQFTT-LPKEIG 298
Query: 221 GLKRLRTVDLSYNKI 235
L+ LR + L N++
Sbjct: 299 QLQNLRVLYLYNNQL 313
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L L+L+ N+L SL +G L LQ L + NQL L
Sbjct: 372 LQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTL 431
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
P++I L LY +NN++ +L + L KL+ ++D
Sbjct: 432 PNEIGKLQNLQELYLSNNKLKTLPDEIGKLQKLRTLDLD 470
>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
Length = 349
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L ++ L +L L L +N+L +L ++G L LQLL++ NQL
Sbjct: 45 PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
ALP +I L L+ NNN++T+L +R L LQ+ ++ NQ+T + + E L NL
Sbjct: 105 TALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPK-EIGKLENL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL +Q+T + + L L L LSHNQLT L +I L+ L+ L N++
Sbjct: 164 QLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT-ILPKEIGQLQNLQRFVLDNNQL 219
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 29/207 (14%)
Query: 57 AFPPTI---RKLHVGF---NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
A P I + L V F N LT+L +R L +L L L NN+L +L ++G L LQL
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQL 165
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + ++QL LP +I L L ++N++T L + L LQ F +D NQ+T++ ++
Sbjct: 166 LSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKE 225
Query: 171 --EFQNLH--------------------NLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
+ QNLH NL L NNQ T + + L L LYLS+
Sbjct: 226 IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSY 285
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQLT F +I L++L+T++L N++
Sbjct: 286 NQLTTF-PKEIGKLQKLQTLNLWNNQL 311
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT L + L +L+ L L++N+L L ++G L LQ V++ NQL LP +I L
Sbjct: 173 LTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNL 232
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY +N++T L + L LQ F +D NQ T++ + E L NL + L NQ+T+
Sbjct: 233 HELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPK-EIGQLQNLQELYLSYNQLTTF 291
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL L L +NQLT L ++I LK L+T++LS N++
Sbjct: 292 PKEIGKLQKLQTLNLWNNQLTT-LPEEIEQLKNLKTLNLSENQL 334
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++ L L+LL + NQL ALP +I L L
Sbjct: 38 LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
N++T+L + L L+V ++ NQ+T + E + L NL + L NNQ+T++
Sbjct: 98 ILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTL-PTEIRQLKNLQMLDLGNNQLTTLPKE 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +QLT L +I L+ L +DLS+N++
Sbjct: 157 IGKLENLQLLSLYESQLT-ILPQEIGKLQNLHELDLSHNQL 196
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N LT L + L +L L+NN+L L ++G L L L + NQL L
Sbjct: 186 LHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTIL 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +NN+ T L + L LQ + +NQ+T + E L L ++
Sbjct: 246 PKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPK-EIGKLQKLQTL 304
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+L NNQ+T++ + L L L LS NQL
Sbjct: 305 NLWNNQLTTLPEEIEQLKNLKTLNLSENQL 334
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L +L+ L+L +N+L L ++G L LQ V++ NQ LP +I
Sbjct: 217 NQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 276
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY + N++T+ + L KLQ N+ NQ+T + +E + L NL +++L NQ+
Sbjct: 277 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTL-PEEIEQLKNLKTLNLSENQLK 335
Query: 190 SMNSSLSGLTKLA 202
++ + L L
Sbjct: 336 TIPQEIGQLQNLK 348
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++G N LT L + L +L L+NN+ L ++G L LQ L + NQL
Sbjct: 232 LHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTF 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P +I +L +L NN++T+L + L L+ N+ NQ+ + + E L NL S
Sbjct: 292 PKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQ-EIGQLQNLKS 349
>gi|260836743|ref|XP_002613365.1| hypothetical protein BRAFLDRAFT_68350 [Branchiostoma floridae]
gi|229298750|gb|EEN69374.1| hypothetical protein BRAFLDRAFT_68350 [Branchiostoma floridae]
Length = 770
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 7/209 (3%)
Query: 36 GTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
G P L +L L +N++T ++ + F P ++ L V N +T+++ T+ L+LN N
Sbjct: 172 GLPHLTSLYLSSNSLTSLNPSVFEGSPKLKSLDVDDNAITAISKDTFAGTNFELLYLNRN 231
Query: 94 RLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
+ +++ L LQ + ++QN ++ L + QL S+ +N++TS++G+ + L
Sbjct: 232 AINTVDVDSFSNLKSLQYVSLDQNNIKDLQDVFKDLPQLQSVSLFDNKLTSIEGVFQNLP 291
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQL 211
KL +++ NQIT + F ++ + S+SL NN I + S + L L LY+ +NQ+
Sbjct: 292 KLGTLSLNGNQITKISSTTFDSVPAMTSLSLSNNAIAEVESGAFRNLDSLDSLYIDNNQI 351
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
E L GL L T+ ++ N + +F T
Sbjct: 352 PEISL---AGLHSLTTLTMNVNNLQRFPT 377
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
Query: 60 PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQ 117
PT++++ + NN+T L + + GL L L+L++N L SL + S KL+ L ++ N
Sbjct: 150 PTLQEIRLPLNNITGLEDAAFGGLPHLTSLYLSSNSLTSLNPSVFEGSPKLKSLDVDDNA 209
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+ A+ D + LY N N I ++D L LQ ++D N I + +D F++L
Sbjct: 210 ITAISKDTFAGTNFELLYLNRNAINTVDVDSFSNLKSLQYVSLDQNNIKDL-QDVFKDLP 268
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L S+SL +N++TS+ L KL L L+ NQ+T+ + + ++ LS N I
Sbjct: 269 QLQSVSLFDNKLTSIEGVFQNLPKLGTLSLNGNQITKISSTTFDSVPAMTSLSLSNNAI 327
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 15/213 (7%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLN 86
++S PA+ +L L NN I + AF ++ L++ N + + SL GL L
Sbjct: 306 ISSTTFDSVPAMTSLSLSNNAIAEVESGAFRNLDSLDSLYIDNNQIPEI--SLAGLHSLT 363
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSL- 144
L +N N L+ L ++L L + N + E L + + +L SLY + ITSL
Sbjct: 364 TLTMNVNNLQRFPTDLEDANQLTYLTLTSNPIKEPLDEQLSVLHRLSSLYLSG--ITSLK 421
Query: 145 ------DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SG 197
L GL L+ + N++ + F+ ++ I L NN +T ++ L G
Sbjct: 422 LAGTLNPKALCGLDALEAVWIKGNELVSIPPTTFECTPSISGIWLSNNNLTELSPRLFHG 481
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
LT+L +L L+ NQL+ D GL +LR++ L
Sbjct: 482 LTELNWLDLTDNQLSHLDPDTFVGLDKLRSLSL 514
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNR 94
P L TL L N IT I F P + L + N + + + + R L L+ L+++NN+
Sbjct: 291 PKLGTLSLNGNQITKISSTTFDSVPAMTSLSLSNNAIAEVESGAFRNLDSLDSLYIDNNQ 350
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT-SLDGLLRGLTK 153
+ E L L L L + N L+ P+D++ +QL L +N I LD L L +
Sbjct: 351 IP--EISLAGLHSLTTLTMNVNNLQRFPTDLEDANQLTYLTLTSNPIKEPLDEQLSVLHR 408
Query: 154 LQVFNMDFNQITMVR------RDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LAYLYL 206
L ++ + IT ++ L L+++ ++ N++ S+ + T ++ ++L
Sbjct: 409 LS--SLYLSGITSLKLAGTLNPKALCGLDALEAVWIKGNELVSIPPTTFECTPSISGIWL 466
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
S+N LTE GL L +DL+ N+++
Sbjct: 467 SNNNLTELSPRLFHGLTELNWLDLTDNQLS 496
>gi|443730785|gb|ELU16143.1| hypothetical protein CAPTEDRAFT_182426 [Capitella teleta]
Length = 610
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 106/197 (53%), Gaps = 4/197 (2%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L+L +N +T + E+ A P + L V N L SL +L L +L L L++N LK+L
Sbjct: 86 LSKLILASNALTSLSEDIAQLPALTVLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKAL 145
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ L +LQ L I+ NQLEALP DI + L L A++N++ +L ++ L ++ FN
Sbjct: 146 PESICQLPRLQFLYIQNNQLEALPEDIGRLALLEELDASHNKLPTLPTSIKFLERVMKFN 205
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
M N + ++ E + L ++ +NQ+ ++ L L KL LYL HN+LT L
Sbjct: 206 MSNNNLNVIVH-EISGMQGLRTLDATHNQLHTLPDDLGHLNKLEQLYLRHNRLTH--LPS 262
Query: 219 IRGLKRLRTVDLSYNKI 235
++ L+ + L N I
Sbjct: 263 LQHCTALKELHLGNNAI 279
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 70 NNLTSLNNSLRGLTD-LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
N LT + L D L L L+ N+L +++ +G LS+L +L + NQL +LP+++
Sbjct: 443 NQLTQYPKQIESLKDSLCELNLSFNKLTTIDASIGCLSRLVMLDLGGNQLLSLPAELSNA 502
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
S L L + NR TS+ ++ L L++ NQI + ++L L ++ LQNN I
Sbjct: 503 SSLRELVISFNRFTSIPSVVYSLPCLEIILAGSNQIAEIDAQGLKSLAQLATLDLQNNDI 562
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLTE 213
+ L +T+L L L N + +
Sbjct: 563 RQVPPELGLVTQLRSLQLEGNAIRQ 587
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 58 FPPTIRKLHVGFNNLTSLNNSLRGLTDLNW--------LFLNNNRLKSLEGQLGTLSKLQ 109
P ++ K+++ +S N SL G TD W L L +N L SL + L L
Sbjct: 53 VPQSVWKINIDVPKESS-NISL-GTTDERWWEQVDLSKLILASNALTSLSEDIAQLPALT 110
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
+L + NQL +LP + L L ++N + +L + L +LQ + NQ+ +
Sbjct: 111 VLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKALPESICQLPRLQFLYIQNNQLEALPE 170
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
D L L+ + +N++ ++ +S+ L ++ +S+N L ++ +I G++ LRT+D
Sbjct: 171 D-IGRLALLEELDASHNKLPTLPTSIKFLERVMKFNMSNNNLN-VIVHEISGMQGLRTLD 228
Query: 230 LSYNKIN 236
++N+++
Sbjct: 229 ATHNQLH 235
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEA 120
+ +L++ N LT L SL+ T L L L NN ++ L E QL + + +L + N+L
Sbjct: 247 LEQLYLRHNRLTHLP-SLQHCTALKELHLGNNAIQGLSEEQLREMHSVSVLDLRDNRLTK 305
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
+PS+I L L L NN I++L L L L+ +D N + +RRD
Sbjct: 306 VPSEIVLLQMLERLDLTNNNISALPYELGTLPNLKSIVLDGNPLKSIRRD 355
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 115 QNQLEALPSDIQ-LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
+NQL P I+ L L L + N++T++D + L++L + ++ NQ+ + E
Sbjct: 442 KNQLTQYPKQIESLKDSLCELNLSFNKLTTIDASIGCLSRLVMLDLGGNQLLSLPA-ELS 500
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
N +L + + N+ TS+ S + L L + NQ+ E ++ L +L T+DL N
Sbjct: 501 NASSLRELVISFNRFTSIPSVVYSLPCLEIILAGSNQIAEIDAQGLKSLAQLATLDLQNN 560
Query: 234 KINKF 238
I +
Sbjct: 561 DIRQV 565
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLE 119
++R+L + FN TS+ + + L L + +N++ ++ Q L +L++L L ++ N +
Sbjct: 504 SLRELVISFNRFTSIPSVVYSLPCLEIILAGSNQIAEIDAQGLKSLAQLATLDLQNNDIR 563
Query: 120 ALPSDIQLFSQLGSLYANNNRI 141
+P ++ L +QL SL N I
Sbjct: 564 QVPPELGLVTQLRSLQLEGNAI 585
>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 511
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 34/219 (15%)
Query: 45 LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LVNN +T FP I + L + N L +L + L L WL+L+ N+LK+L
Sbjct: 45 LVNNQLT-----IFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTL 99
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++GTL L++L + +NQL LPS+I L L+ +N++ +L + L L+ N
Sbjct: 100 PKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELN 159
Query: 159 MDFNQITMVRRD----------------------EFQNLHNLDSISLQNNQITSMNSSLS 196
+ NQ+ ++ ++ E L NL S++L+NN++ ++ +
Sbjct: 160 LANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIG 219
Query: 197 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L KL +LYL++NQL L +I L++L + L+ N++
Sbjct: 220 ALQKLEWLYLTNNQLAT-LPKEIGKLQKLEWLGLTNNQL 257
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L L WL+L NN+L +L ++G L KL+ L + NQL++L
Sbjct: 201 LQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSL 260
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I L L NNR+ S + L LQ ++++N+ T + ++
Sbjct: 261 PQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLN 320
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L L+ ++L NN++ ++ + L KL +LYL++NQL L +I
Sbjct: 321 LEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLAT-LPKEI 379
Query: 220 RGLKRLRTVDLSYNKI 235
L+ L+ +DL YN++
Sbjct: 380 GQLQNLKDLDLEYNQL 395
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 52 HIHENAF---PPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
H+ N F P I LH + N LT+L + L L WL L NNRL +L ++
Sbjct: 297 HLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEI 356
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
GTL KLQ L + NQL LP +I L L N++ +L + L +L+ ++ N
Sbjct: 357 GTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNN 416
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T + +E L + ++L NNQ+ ++ + L L L LS N T F +I GL
Sbjct: 417 QLTTL-PEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTF-PKEIVGL 474
Query: 223 KRLRTVDLS 231
K L+ + L
Sbjct: 475 KHLQMLKLK 483
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L+V N L +L + L +L L L NNRL +L ++G L KL+ L + NQL L
Sbjct: 178 LQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATL 237
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L NN++ SL + L L+ ++ N++ + E L NL +
Sbjct: 238 PKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPK-EIGTLPNLQRL 296
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ N+ T++ + L +L +L L HNQLT L +I L+RL ++L N++
Sbjct: 297 HLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTT-LPQEIGRLERLEWLNLYNNRL 349
>gi|227874840|ref|ZP_03992993.1| possible leucine-rich repeat-containing protein [Mobiluncus
mulieris ATCC 35243]
gi|306818136|ref|ZP_07451867.1| leucine-rich repeat containing protein [Mobiluncus mulieris ATCC
35239]
gi|227844615|gb|EEJ54771.1| possible leucine-rich repeat-containing protein [Mobiluncus
mulieris ATCC 35243]
gi|304649100|gb|EFM46394.1| leucine-rich repeat containing protein [Mobiluncus mulieris ATCC
35239]
Length = 241
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L TL L N +T +FP I +L ++G N LTS+ +R L +L L L N
Sbjct: 14 LQTLYLWKNQLT-----SFPKEISQLQNLQHLYLGENQLTSIPKEIRQLQNLQTLNLWRN 68
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L S ++ L LQ LV+ N+L ++P +I L SL N++TS+ +R L
Sbjct: 69 QLTSFPTEILQLQNLQHLVLRDNKLTSIPKEIGQLQNLTSLDLAGNKLTSIPKEIRQLQN 128
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
LQ N+ NQ+T + Q L NL +SL +N++TS+ + +S L L YLYL N+LT
Sbjct: 129 LQTLNLWRNQLTSFPTEILQ-LQNLQHLSLGDNKLTSIPTEISQLKNLQYLYLEDNKLTS 187
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
+ +I L+ L+ ++L NK+
Sbjct: 188 -IPKEISQLQNLQYLNLQDNKL 208
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
+TS+ + L +L L+L N+L S ++ L LQ L + +NQL ++P +I+ L
Sbjct: 1 MTSIPKEISQLQNLQTLYLWKNQLTSFPKEISQLQNLQHLYLGENQLTSIPKEIRQLQNL 60
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
+L N++TS + L LQ + N++T + + E L NL S+ L N++TS+
Sbjct: 61 QTLNLWRNQLTSFPTEILQLQNLQHLVLRDNKLTSIPK-EIGQLQNLTSLDLAGNKLTSI 119
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+ L L L L NQLT F +I L+ L+ + L NK+ T
Sbjct: 120 PKEIRQLQNLQTLNLWRNQLTSF-PTEILQLQNLQHLSLGDNKLTSIPTE 168
>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 400
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L ++ L +L L L +N+L +L ++G L LQLL++ NQL
Sbjct: 45 PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
ALP +I L L+ NNN++T+L +R L LQ+ ++ NQ+T + + E L NL
Sbjct: 105 TALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPK-EIGKLENL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL +Q+T + + L L L LSHNQLT L +I L+ L+ L N++
Sbjct: 164 QLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT-ILPKEIGQLQNLQRFVLDNNQL 219
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 29/207 (14%)
Query: 57 AFPPTI---RKLHVGF---NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
A P I + L V F N LT+L +R L +L L L NN+L +L ++G L LQL
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQL 165
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + ++QL LP +I L L ++N++T L + L LQ F +D NQ+T++ ++
Sbjct: 166 LSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKE 225
Query: 171 --EFQNLH--------------------NLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
+ QNLH NL L NNQ T + + L L LYLS+
Sbjct: 226 IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSY 285
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQLT F +I L++L+T++L N++
Sbjct: 286 NQLTTF-PKEIGKLQKLQTLNLWNNQL 311
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 5/176 (2%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L +L+ L+L +N+L L ++G L LQ V++ NQ LP +I
Sbjct: 217 NQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 276
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY + N++T+ + L KLQ N+ NQ+T + +E + L NL +++L NQ+
Sbjct: 277 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTL-PEEIEQLKNLKTLNLSENQLK 335
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 245
++ + L L L LS+NQLT L +I LK L+T++L +N N+F ++ + K
Sbjct: 336 TIPQEIGQLQNLKSLDLSNNQLTT-LPKEIEQLKNLQTLNL-WN--NQFSSQEKEK 387
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++G N LT L + L +L L+NN+ L ++G L LQ L + NQL
Sbjct: 232 LHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTF 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L +L NN++T+L + L L+ N+ NQ+ + + E L NL S+
Sbjct: 292 PKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQ-EIGQLQNLKSL 350
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+T++ + L L L L +NQ + + IR L
Sbjct: 351 DLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKEKIRKL 391
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++ L L+LL + NQL ALP +I L L
Sbjct: 38 LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
N++T+L + L L+V ++ NQ+T + E + L NL + L NNQ+T++
Sbjct: 98 ILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTL-PTEIRQLKNLQMLDLGNNQLTTLPKE 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +QLT L +I L+ L +DLS+N++
Sbjct: 157 IGKLENLQLLSLYESQLT-ILPQEIGKLQNLHELDLSHNQL 196
>gi|255070739|ref|XP_002507451.1| predicted protein [Micromonas sp. RCC299]
gi|226522726|gb|ACO68709.1| predicted protein [Micromonas sp. RCC299]
Length = 395
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 113/201 (56%), Gaps = 3/201 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L L NN++T + E +++ L +G N LTSL + LT L L+LN N+L S
Sbjct: 173 SLERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTS 232
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L ++G L+ L+ L + +NQL +P +I + L LY +N++TS+ + L+V
Sbjct: 233 LLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTSVPAEVGQHRSLKVL 292
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ NQ+T V E L L + L NNQ+TS+ + + LT L L+L +NQLT +
Sbjct: 293 SLYNNQLTSV-PAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQELFLYNNQLTR-VPA 350
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L+ L +DL+ N++ +
Sbjct: 351 EIGQLRSLERLDLNRNQLTRL 371
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L + N LTS+ + LT L L L+NN L S+ ++G L+ L++L + NQL +
Sbjct: 150 ALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTS 209
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I + L L+ N N++TSL + LT L+ ++ NQ+T V E L L
Sbjct: 210 LPAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRV-PVEIGQLTALRE 268
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ LQ+NQ+TS+ + + L L L +NQLT
Sbjct: 269 LYLQHNQLTSVPAEVGQHRSLKVLSLYNNQLT 300
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ ++G LS L+ L + QN+L ++P++I + L L +NN +TS+ + LT L+V
Sbjct: 140 AVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKV 199
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ NQ+T + E L +L + L NQ+TS+ + + LT L L+LS NQLT +
Sbjct: 200 LGLGGNQLTSL-PAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRVPV 258
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+I L LR + L +N++
Sbjct: 259 -EIGQLTALRELYLQHNQLTSV 279
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L+ L L L NRL S+ ++G L+ L+ L + N L ++P++I + L L N++
Sbjct: 148 LSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQL 207
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
TSL + LT LQ ++ NQ+T + E L L+ + L NQ+T + + LT L
Sbjct: 208 TSLPAEIGRLTSLQELWLNGNQLTSL-LAEIGQLTALEKLHLSRNQLTRVPVEIGQLTAL 266
Query: 202 AYLYLSHNQLT 212
LYL HNQLT
Sbjct: 267 RELYLQHNQLT 277
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
AL L L +N +T + E +++ L + N LTS+ + L L L+L+NN+L S
Sbjct: 265 ALRELYLQHNQLTSVPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTS 324
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ LQ L + NQL +P++I L L N N++T L L L
Sbjct: 325 VPAEIGQLTSLQELFLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAALCKLRATCCI 384
Query: 158 NMDFNQITM 166
N++T+
Sbjct: 385 VRLDNRVTV 393
>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
Length = 522
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 11/222 (4%)
Query: 7 FEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIH-ENAFPPTIRKL 65
E+G V L L D+ TG+ P L AL L L N +T + E ++ K
Sbjct: 180 MENGRVVELELEDVG-LTGAVPAEVGRLT---ALRELDLNGNQLTSVPVEIGQLTSLVKF 235
Query: 66 HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
+G N LTS+ + LT L WL L++NRL S+ +G L+ L+ L + NQL ++P++I
Sbjct: 236 GLGGNELTSVPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEI 295
Query: 126 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+ L L N++TS+ + LT L N++ NQ+T V + +Q L +L + L
Sbjct: 296 WQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQ-LTSLRGLFLGG 354
Query: 186 NQITSMNSSLSGLTKLAYLYLSHNQLTE-----FLLDDIRGL 222
N++TS+ + + LT L+ L L++NQLT + L +RGL
Sbjct: 355 NRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGL 396
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LTS+ + LT L LFL NRL S+ ++G L+ L L + NQL +
Sbjct: 323 SLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQLTS 382
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L+ NR+TS+ + LT L+ + NQ+T V E L L
Sbjct: 383 VPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPA-EIGQLTALTE 441
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+SLQ N++ S+ + + L L L+L+ N LT + +I L+ L +++L N++
Sbjct: 442 LSLQRNKLKSVPAEIGQLATLKELWLNDNLLTS-VPAEIGQLRALTSLNLDRNRLTSV 498
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N LTS+ + LT L+ L LNNN+L S+ ++ L+ L+ L + N+L +
Sbjct: 300 SLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTS 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L NNN++TS+ + LT L+ + N++T V E L +L
Sbjct: 360 VPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPA-EIGRLTSLKG 418
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++L NQ+TS+ + + LT L L L N+L
Sbjct: 419 LALYGNQLTSVPAEIGQLTALTELSLQRNKL 449
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 47 NNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
NN +T + + T +R L +G N LTS+ + LT L+ L LNNN+L S+ ++ L
Sbjct: 331 NNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQL 390
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ L+ L + N+L ++P++I + L L N++TS+ + LT L ++ N++
Sbjct: 391 TSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRNKLK 450
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
V E L L + L +N +TS+ + + L L L L N+LT
Sbjct: 451 SVPA-EIGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRNRLT 496
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 47 NNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
NN +T + + T +R L +G N LTS+ + LT L L L N+L S+ ++G L
Sbjct: 377 NNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAEIGQL 436
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ L L +++N+L+++P++I + L L+ N+N +TS+ + L L N+D N++T
Sbjct: 437 TALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRNRLT 496
Query: 166 MV 167
V
Sbjct: 497 SV 498
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N LTS+ + LT L L L N+LKS+ ++G L+ L+ L + N L +
Sbjct: 415 SLKGLALYGNQLTSVPAEIGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTS 474
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
+P++I L SL + NR+TS+ +R L
Sbjct: 475 VPAEIGQLRALTSLNLDRNRLTSVPAAIREL 505
>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 461
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++G+N LT++ + + L ++N L L N++ + L L +L L +E N L A+
Sbjct: 170 LTELYMGYNALTAIPDEIGKLKNMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAI 229
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I + L NNN I + L L +L N+ +N +T + DE L ++ +
Sbjct: 230 PDEIGKLKSMKILKLNNNNIEKIPDSLCALEQLTELNVRYNALTAI-PDEITKLKSMKIL 288
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +N I + SL L +L LY+ + LT + D+I LK ++ +DLS++K K
Sbjct: 289 DLSSNNIAKIPDSLCALEQLTELYMGSDALTA-IPDEITKLKSMKILDLSFSKFAKI 344
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 3 RFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP-PT 61
+ + D L +L E + D++ ++ L L NNNI I ++
Sbjct: 202 KIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDSLCALEQ 261
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L+V +N LT++ + + L + L L++N + + L L +L L + + L A+
Sbjct: 262 LTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAI 321
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I + L + ++ + L L +L NM +N +T + DE L +L +
Sbjct: 322 PDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAI-PDEITKLKSLKIL 380
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+L +N I + SL L +L L + N LT + D+I LK ++T++LS+NKI K
Sbjct: 381 NLNHNNIAKIPDSLCALEQLTELNMVSNALTA-IPDEISKLKSMKTLNLSFNKIAKI 436
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT + + +L L L++N++ + L L +L L + N L A+P +I
Sbjct: 132 NGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLK 191
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+ L N+I + L L +L M++N +T + DE L ++ + L NN I
Sbjct: 192 NMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAI-PDEIGKLKSMKILKLNNNNIE 250
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ SL L +L L + +N LT + D+I LK ++ +DLS N I K
Sbjct: 251 KIPDSLCALEQLTELNVRYNALTA-IPDEITKLKSMKILDLSSNNIAKI 298
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D++ ++ L L +NNI I ++ + +L++G + LT++ + + L + L L
Sbjct: 277 DEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSMKILDL 336
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 150
+ ++ + L TL +L L + N L A+P +I L L N+N I + L
Sbjct: 337 SFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEITKLKSLKILNLNHNNIAKIPDSLCA 396
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
L +L NM N +T + DE L ++ +++L N+I + SL L +L L + N
Sbjct: 397 LEQLTELNMVSNALTAI-PDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLTELDMMSNA 455
Query: 211 LT 212
LT
Sbjct: 456 LT 457
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ +N LT++ + + L L L LN+N + + L L +L L + N L A+
Sbjct: 354 LTKLNMHYNALTAIPDEITKLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNALTAI 413
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
P +I + +L + N+I + L L +L +M N +T +
Sbjct: 414 PDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLTELDMMSNALTSI 459
>gi|421110748|ref|ZP_15571239.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803845|gb|EKS09972.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 291
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N L +L + L +L L LN N L +L ++G L KLQ L + QNQL+ L
Sbjct: 124 LQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQKLQTLDLAQNQLKTL 183
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L +L+ NN +T+L + L LQ N++ NQ T + +E NL +L+S+
Sbjct: 184 PKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTL-PEEIGNLQSLESL 242
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+L N +TS + L KL +LYL N
Sbjct: 243 NLSGNSLTSFPEEIGKLQKLKWLYLGGN 270
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 22/228 (9%)
Query: 11 HAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFN 70
H + ++DL P G + LT+ P I N+ ++ E L++ N
Sbjct: 47 HPTDVRVLDLGPPEGGNQLTT-----LPKEI------GNLQNLQE---------LNLNSN 86
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ 130
T+L + L L L LN +RL +L ++G L KLQ L + +NQL+ LP +I
Sbjct: 87 QFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQN 146
Query: 131 LGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L +L N N +T+L + L KLQ ++ NQ+ + + E + L L+++ L NN++T+
Sbjct: 147 LKNLSLNGNELTTLPKEIGNLQKLQTLDLAQNQLKTLPK-EIEKLQKLEALHLGNNELTT 205
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + L L L L+ NQ T L ++I L+ L +++LS N + F
Sbjct: 206 LPKEIGNLQNLQELNLNSNQFTT-LPEEIGNLQSLESLNLSGNSLTSF 252
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L +L + L L L L NN L +L ++G L LQ L + NQ L
Sbjct: 170 LQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTL 229
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L SL + N +TS + L KL+ + N ++++ Q L
Sbjct: 230 PEEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGNPFLRSQKEKIQKL 283
>gi|421117596|ref|ZP_15577955.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410010810|gb|EKO68942.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 286
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+L L ++ L LQLL + N+L
Sbjct: 46 PLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L DI+ L SL +NN++T+L + L L+ + NQ + E L NL
Sbjct: 106 TTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPK-EIGQLQNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NNQ+T + + ++ L KL YLYLS NQL L +I LK L+++DLSYN++
Sbjct: 165 KVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLIT-LPKEIEQLKNLKSLDLSYNQL 220
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N + L +L L+L+ N+ + ++G L L++L + NQL L
Sbjct: 118 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL 177
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY ++N++ +L + L L+ ++ +NQ+T++ + E L NL ++
Sbjct: 178 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPK-EVGQLENLQTL 236
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L+NNQ+ ++ + L L L L +NQL+ + IR L
Sbjct: 237 DLRNNQLKTLPKEIEQLKNLQTLNLWNNQLSSEEKEKIRKL 277
>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 433
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 29/256 (11%)
Query: 11 HAVALNLIDL---EPETGSHPLTS--DDLKGTPALITLLLVNNNITHIHENAFP-PTIRK 64
H + ++DL E E + PLT+ ++ +L L+L N +T I + + +++
Sbjct: 136 HPTDVRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQR 195
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + FN LT++ + L +L + NNN+LK+L ++G L LQ L + N++ LP +
Sbjct: 196 LSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKE 255
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-------------- 170
I L LY ++N+IT L + L KL+ ++ N++T + ++
Sbjct: 256 IGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDH 315
Query: 171 --------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
E NL NL ++ L NN++T++ + L L L L++N+LT L +I L
Sbjct: 316 NNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTT-LPQEIGNL 374
Query: 223 KRLRTVDLSYNKINKF 238
+ L ++DLS N + F
Sbjct: 375 QSLESLDLSDNPLTSF 390
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ NNL ++ + L +L L LNNN+L +L ++G L LQ L + N+L L
Sbjct: 308 LKVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTL 367
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNM 159
P +I L SL ++N +TS G L+ L L++ N+
Sbjct: 368 PQEIGNLQSLESLDLSDNPLTSFPEEIGKLQHLKWLRLENI 408
>gi|302835578|ref|XP_002949350.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
nagariensis]
gi|300265177|gb|EFJ49369.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
nagariensis]
Length = 383
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 16/191 (8%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
PPTI + L + FN L SL + T L WL LN N+LK L ++G L+ L
Sbjct: 140 KGLPPTIGRLTRVKHLSLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLV 199
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-----GLLRGLTKLQVFNMDFNQI 164
L + N+LE++P ++ + L +L + NR+T L GL +L ++ ++
Sbjct: 200 RLSLHINELESVPPELGRLTGLEALSLHKNRLTRLPPELPLGLAGSCCRLSLYENQLGEV 259
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
E N+ L + L +NQ+TS+ S L L +L L+L NQLT L +I GL R
Sbjct: 260 P----PELGNMGLLQELWLYSNQLTSVPSELGRLGELRRLWLDRNQLTS-LPREISGLTR 314
Query: 225 LRTVDLSYNKI 235
L+ + L +N++
Sbjct: 315 LQELYLDHNRL 325
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
V ++ L + L DL L+L+NN L+ L ++G L +L L + N L +LP +
Sbjct: 19 VDACGISELPPAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVT 78
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+QL L+ N + L + +T L+ ++ N++ V E L +L + L N
Sbjct: 79 QMTQLKKLWLPANMLVRLPAEVCAITSLEWLDVSENKLEEV-CAEIGQLTSLTRLDLHTN 137
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ + ++ LT++ +L L NQL E L DI L + L+ N++ + T
Sbjct: 138 VLKGLPPTIGRLTRVKHLSLHFNQL-ESLPPDIGQCTSLVWLSLNANQLKQLPT 190
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 38 PALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
P L L L NN + + E P + L +G N L SL + +T L L+L N L
Sbjct: 35 PDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQLKKLWLPANMLV 94
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
L ++ ++ L+ L + +N+LE + ++I + L L + N + L + LT+++
Sbjct: 95 RLPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKH 154
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
++ FNQ+ + D Q +L +SL NQ+ + + + LT L L L N+L E +
Sbjct: 155 LSLHFNQLESLPPDIGQ-CTSLVWLSLNANQLKQLPTEMGELTGLVRLSLHINEL-ESVP 212
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
++ L L + L N++ +
Sbjct: 213 PELGRLTGLEALSLHKNRLTRL 234
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L + L + L L+L +N+L S+ +LG L +L+ L +++NQL +LP +I +
Sbjct: 254 NQLGEVPPELGNMGLLQELWLYSNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISGLT 313
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
+L LY ++NR+ L L LT+L+ ++ N
Sbjct: 314 RLQELYLDHNRLVELPSELGALTQLRRLYLEGN 346
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LTS+ + L L +L L+L+ N+L SL ++ L++LQ L ++ N+L L
Sbjct: 269 LQELWLYSNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISGLTRLQELYLDHNRLVEL 328
Query: 122 PSDIQLFSQLGSLYANNN 139
PS++ +QL LY N
Sbjct: 329 PSELGALTQLRRLYLEGN 346
>gi|320168558|gb|EFW45457.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 828
Score = 83.2 bits (204), Expect = 9e-14, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 7/214 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNN-SLRGLTDL 85
++++ G AL LLL NN I+ I +A+ T+ L + N +TS+N+ SL LT L
Sbjct: 124 ISANAFVGLTALTQLLLYNNQISSIPASAWADLNTLINLSLYQNRITSINDASLTSLTAL 183
Query: 86 NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L L+NN++ S+ L+ L L ++ N + ++ + S L LY ++N++ S
Sbjct: 184 KTLILDNNQITSVPANAFAGLTSLTYLTVQSNPITSISAGAFASLSALTCLYLSSNQLVS 243
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ LT L + N+ NQ+T + + F L L + L NQITS+ + + +GL L
Sbjct: 244 IPADAFTDLTALTLLNLRDNQLTSISANAFTGLVALTQLQLPGNQITSIAADAFTGLNAL 303
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L L+ NQ + + GL L T+ L N I
Sbjct: 304 SFLDLTSNQFSSIPSSALTGLPALSTLILYTNSI 337
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSL---NNSLRGLTDLNWLFLN---- 91
AL L L NN IT I NAF VG LT L NN + + W LN
Sbjct: 110 ALKDLRLDNNQITSISANAF--------VGLTALTQLLLYNNQISSIPASAWADLNTLIN 161
Query: 92 ----NNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 145
NR+ S+ + L +L+ L+ L+++ NQ+ ++P++ + L L +N ITS+
Sbjct: 162 LSLYQNRITSINDASLTSLTALKTLILDNNQITSVPANAFAGLTSLTYLTVQSNPITSIS 221
Query: 146 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 203
G L+ L + NQ+ + D F +L L ++L++NQ+TS+++ + +GL L
Sbjct: 222 AGAFASLSALTCLYLSSNQLVSIPADAFTDLTALTLLNLRDNQLTSISANAFTGLVALTQ 281
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L L NQ+T D GL L +DL+ N+ +
Sbjct: 282 LQLPGNQITSIAADAFTGLNALSFLDLTSNQFS 314
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 43 LLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLE 99
L L N I I AF + LH+ N LTS+ + LT L L L+NN++ S+
Sbjct: 66 LSLQGNLIPSIAAGAFTGLTALTTLHLYANQLTSIPAYNFTVLTALKDLRLDNNQITSIS 125
Query: 100 GQ-LGTLSKLQLLVIEQNQLEALPS----DIQLFSQLGSLYANNNRITSL-DGLLRGLTK 153
L+ L L++ NQ+ ++P+ D+ L SLY NRITS+ D L LT
Sbjct: 126 ANAFVGLTALTQLLLYNNQISSIPASAWADLNTLINL-SLY--QNRITSINDASLTSLTA 182
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLT 212
L+ +D NQIT V + F L +L +++Q+N ITS+++ + + L+ L LYLS NQL
Sbjct: 183 LKTLILDNNQITSVPANAFAGLTSLTYLTVQSNPITSISAGAFASLSALTCLYLSSNQLV 242
Query: 213 EFLLDDIRGLKRLRTVDLSYNKI 235
D L L ++L N++
Sbjct: 243 SIPADAFTDLTALTLLNLRDNQL 265
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFL 90
L AL TL+L NN IT + NAF ++ L V N +TS++ + L+ L L+L
Sbjct: 177 LTSLTALKTLILDNNQITSVPANAFAGLTSLTYLTVQSNPITSISAGAFASLSALTCLYL 236
Query: 91 NNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDI---------------QLFSQLGSL 134
++N+L S+ T L+ L LL + NQL ++ ++ Q+ S
Sbjct: 237 SSNQLVSIPADAFTDLTALTLLNLRDNQLTSISANAFTGLVALTQLQLPGNQITSIAADA 296
Query: 135 YANNNRITSLD-----------GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ N ++ LD L GL L + N IT + + F + L ++ L
Sbjct: 297 FTGLNALSFLDLTSNQFSSIPSSALTGLPALSTLILYTNSITSIPANAFAGMTALQAVVL 356
Query: 184 QNNQITSM-NSSLSGLTKLAYLYLSHNQLT 212
NQITS+ S+ +GLT + YL L N +T
Sbjct: 357 STNQITSIAASAFTGLTAVTYLVLDGNPVT 386
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 26 SHPLTS---DDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSL 79
S+P+TS AL L L +N + I +AF + L++ N LTS++ N+
Sbjct: 214 SNPITSISAGAFASLSALTCLYLSSNQLVSIPADAFTDLTALTLLNLRDNQLTSISANAF 273
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYAN 137
GL L L L N++ S+ T L+ L L + NQ ++PS + L +L
Sbjct: 274 TGLVALTQLQLPGNQITSIAADAFTGLNALSFLDLTSNQFSSIPSSALTGLPALSTLILY 333
Query: 138 NNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL- 195
N ITS+ G+T LQ + NQIT + F L + + L N +T++ L
Sbjct: 334 TNSITSIPANAFAGMTALQAVVLSTNQITSIAASAFTGLTAVTYLVLDGNPVTTLPPGLF 393
Query: 196 SGLTKLAYL-----YLSHNQLT 212
GL YL Y+S N T
Sbjct: 394 QGLPNGLYLSVSQQYMSPNNFT 415
Score = 50.1 bits (118), Expect = 9e-04, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDL 85
+ +D AL L L +N +T I NAF + +L + N +TS+ ++ GL L
Sbjct: 244 IPADAFTDLTALTLLNLRDNQLTSISANAFTGLVALTQLQLPGNQITSIAADAFTGLNAL 303
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRI 141
++L L +N+ S+ L L L L++ N + ++P++ F+ + +L A + N+I
Sbjct: 304 SFLDLTSNQFSSIPSSALTGLPALSTLILYTNSITSIPANA--FAGMTALQAVVLSTNQI 361
Query: 142 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
TS+ GLT + +D N +T + FQ L N +S+ ++ N + G T
Sbjct: 362 TSIAASAFTGLTAVTYLVLDGNPVTTLPPGLFQGLPNGLYLSVSQQYMSPNNFTFGGNT 420
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 14 ALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNN 71
AL+ +DL S + S L G PAL TL+L N+IT I NAF ++ + + N
Sbjct: 302 ALSFLDLTSNQFS-SIPSSALTGLPALSTLILYTNSITSIPANAFAGMTALQAVVLSTNQ 360
Query: 72 LTSLNNS-LRGLTDLNWLFLNNNRLKSL 98
+TS+ S GLT + +L L+ N + +L
Sbjct: 361 ITSIAASAFTGLTAVTYLVLDGNPVTTL 388
>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 402
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L L N+L +L ++G L L++L + NQL L
Sbjct: 96 LQELNLWNNQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +L NN+I + + L LQ +D+NQI + + E L NL +
Sbjct: 156 PKEIEQLKNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPK-EIGQLQNLQEL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NNQ+ ++ + L L L+L NQLT L ++I LK L+T+DL YN++
Sbjct: 215 NLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTT-LPNEIEQLKNLQTLDLYYNQL 267
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G+N LT+L+ + L +L LFLNNN+L +L ++ L LQ L + NQ++ +
Sbjct: 119 LQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKII 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I L LY + N+I ++ + L LQ N+ NQ+ + + E + L NL ++
Sbjct: 179 PNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPK-EIEQLKNLQTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + + L L L L +NQLT L +I L+ L+ + L YN++
Sbjct: 238 HLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTT-LPQEIGQLQNLQELSLYYNQL 290
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N + + N + L +L L+L+ N++K++ ++G L LQ L + NQL+ L
Sbjct: 165 LQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +L+ +N++T+L + L LQ ++ +NQ+T + + E L NL +
Sbjct: 225 PKEIEQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQ-EIGQLQNLQEL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL NQ+T++ + L L L L +NQLT + +I L+ L+++DL N++
Sbjct: 284 SLYYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPI-EIGQLQNLKSLDLRNNQL 336
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+G N LT+L N + L +L L L N+L +L ++G L LQ L + NQL AL
Sbjct: 234 LQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTAL 293
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL NN++T+L + L L+ ++ NQ+T + E L NL S+
Sbjct: 294 PKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTTL-PIEIGQLQNLKSL 352
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L+NNQ+T + + L L LYL++NQL+ + IR L
Sbjct: 353 DLRNNQLTILPKEIGQLKNLQELYLNNNQLSIEEKERIRKL 393
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L++ +L +L ++ L L+ L + NQ + LP +I L L
Sbjct: 40 LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
NN++T+L + L LQ + +NQ+T + + E L NL + L NNQ+T++
Sbjct: 100 NLWNNQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQ-EIGQLQNLKVLFLNNNQLTTLPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +NQ+ + + + I L+ L+ + L YN+I
Sbjct: 159 IEQLKNLQTLGLGNNQI-KIIPNGIWQLQNLQKLYLDYNQI 198
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 25 GSHPLTS--DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRG 81
GS+ LT+ ++++ L TL L N +T + E +++L + +N LT+L +
Sbjct: 240 GSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQ 299
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L NN+L +L ++G L L+ L + NQL LP +I L SL NN++
Sbjct: 300 LQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQL 359
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
T L + L LQ ++ NQ+++ ++ + L
Sbjct: 360 TILPKEIGQLKNLQELYLNNNQLSIEEKERIRKL 393
>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
2006001855]
Length = 456
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 10/220 (4%)
Query: 32 DDLKGTPALITLL--LVNNNITHIHENAFPPTIRKLH----VGF--NNLTSLNNSLRGLT 83
+ LK P I L L ++ H P I KL +G N L ++ L
Sbjct: 131 NQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLK 190
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L L+L+NN+LK+L + G L LQ+L + NQL+ LP +I+ +L L NN++ +
Sbjct: 191 SLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQLKT 250
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L + L LQV + +NQ+ + + EF L +L + L N Q+T+ + + L L
Sbjct: 251 LPKEIGKLQNLQVLGLSYNQLKKLPK-EFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTE 309
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE 243
LYLS+NQLT F ++I L+ L + LS N++ + E
Sbjct: 310 LYLSNNQLTTF-PNEIGELQNLTELYLSNNQLQALPKKIE 348
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 4/203 (1%)
Query: 38 PALITLLLVNNN--ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
P + +L +N+N IT E +R+LH N L ++ + L +L L LN+N+L
Sbjct: 97 PTDVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQL 156
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
K++ ++G L LQ L + NQL+ +P + L LY +NN++ +L L LQ
Sbjct: 157 KTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQ 216
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
V + NQ+ + + E + L L ++L NNQ+ ++ + L L L LS+NQL + L
Sbjct: 217 VLYLSNNQLKTLPK-EIRKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLSYNQLKK-L 274
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ LK L+ + LS ++ F
Sbjct: 275 PKEFGKLKSLQKLYLSNYQLTTF 297
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++KL++ LT+ N + L +L L+L+NN+L + ++G L L L + NQL+A
Sbjct: 283 SLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFPNEIGELQNLTELYLSNNQLQA 342
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP I+ L L NNN++T++ + L LQV ++ NQ+T + +E L NL
Sbjct: 343 LPKKIEKLKNLQVLILNNNQLTTIPNEIGELKNLQVLTLNNNQLTTI-PNEIGELKNLRE 401
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYL 206
++L NQ+ ++ + L L LYL
Sbjct: 402 LNLSRNQLQALPKEIGHLKNLQELYL 427
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSL 75
L+++ LK P I L L NN + P I KL + +N L L
Sbjct: 220 LSNNQLKTLPKEIRKLKKLQELALYNNQLK-----TLPKEIGKLQNLQVLGLSYNQLKKL 274
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
L L L+L+N +L + ++G L L L + NQL P++I L LY
Sbjct: 275 PKEFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFPNEIGELQNLTELY 334
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+NN++ +L + L LQV ++ NQ+T + +E L NL ++L NNQ+T++ + +
Sbjct: 335 LSNNQLQALPKKIEKLKNLQVLILNNNQLTTI-PNEIGELKNLQVLTLNNNQLTTIPNEI 393
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
L L L LS NQL + L +I LK L+ + L
Sbjct: 394 GELKNLRELNLSRNQL-QALPKEIGHLKNLQELYL 427
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 40 LITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L L L NN +T FP I +L++ N L +L + L +L L LNNN
Sbjct: 307 LTELYLSNNQLT-----TFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNN 361
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L ++ ++G L LQ+L + NQL +P++I L L + N++ +L + L
Sbjct: 362 QLTTIPNEIGELKNLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEIGHLKN 421
Query: 154 LQVFNMD 160
LQ +D
Sbjct: 422 LQELYLD 428
>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
Length = 867
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I +L + +N TSL ++GL L+W LNNN+L +L ++G L L L + NQL L
Sbjct: 133 INRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTL 192
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L SL + N++ SL ++ L L + NQ+ + E L NL S+
Sbjct: 193 PPEIGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATL-PPEIGFLSNLISL 251
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+TS+ + LTKL LSHN++ E L +IR L +L ++ L N++
Sbjct: 252 NLSYNQLTSIPPEIGQLTKLIQFRLSHNKI-ETLPPEIRCLTQLTSLMLKNNQL 304
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 2/191 (1%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
+ ++ + I + A L + F L +L + LT L +L L NN+L +L Q+G
Sbjct: 1 MTDDELLQIIQQAIEEKAETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGK 60
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
L KL L + NQL ALP +I + L L+ + N++T+L + LT L + N +
Sbjct: 61 LKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFL 120
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
+ +L N++ +SL NQ TS+ + GL L++ L++NQLT L +I LK
Sbjct: 121 ETLPTT-LNHLVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTT-LPPEIGQLKS 178
Query: 225 LRTVDLSYNKI 235
L +DL YN++
Sbjct: 179 LNQLDLGYNQL 189
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 49 NITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+T +A PP I +LH+ +N LT+L + LT L+ L+L++N L++L L
Sbjct: 68 NLTDNQLSALPPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETLPTTL 127
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
L + L + NQ +LP I+ L NNN++T+L + L L ++ +N
Sbjct: 128 NHLVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYN 187
Query: 163 QITMVRRD----------------------EFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
Q+T + + E Q L NLDS++L NNQ+ ++ + L+
Sbjct: 188 QLTTLPPEIGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSN 247
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L LS+NQLT + +I L +L LS+NKI
Sbjct: 248 LISLNLSYNQLTS-IPPEIGQLTKLIQFRLSHNKI 281
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 57 AFPPTIR------KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ PP I+ L + N L +L + L++L L L+ N+L S+ ++G L+KL
Sbjct: 214 SLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQ 273
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
+ N++E LP +I+ +QL SL NN++ +L
Sbjct: 274 FRLSHNKIETLPPEIRCLTQLTSLMLKNNQLLAL 307
>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 376
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 11/196 (5%)
Query: 52 HIHENAF---PPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++H+N F P + KL +G N LT+L N + L +L L L +N+ K++ ++
Sbjct: 98 NLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEI 157
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL ALP++I L SL +NR+T+L + L KLQ + N
Sbjct: 158 GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTN 217
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
++T + +E L NL + L +NQ+T + + + L L LYL N+LT L DI L
Sbjct: 218 RLTTL-PNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTT-LSKDIEQL 275
Query: 223 KRLRTVDLSYNKINKF 238
+ L+++DL N++ F
Sbjct: 276 QNLKSLDLWNNQLTTF 291
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
LT + K P I TL L NN +T + +E ++ L +G N LT+L N +
Sbjct: 145 LTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIG 204
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L L L+L+ NRL +L ++G L LQ L + NQL LP++I L +LY +NR
Sbjct: 205 QLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNR 264
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+T+L + L L+ ++ NQ+T + E + L NL + L +NQ+T++ + L
Sbjct: 265 LTTLSKDIEQLQNLKSLDLWNNQLTTFPK-EIEQLKNLQVLDLGSNQLTTLPEEIEQLKN 323
Query: 201 LAYLYLSHNQLT 212
L L L NQLT
Sbjct: 324 LQVLDLGSNQLT 335
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N +L + L +L L LN N+L L ++G L L+ L + NQ
Sbjct: 45 PLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQF 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +++ L L +NR+T+L + L L+V + NQ + + E L NL
Sbjct: 105 TILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L NNQ+T++ + + L L L L N+LT L ++I L++L+ + LS N++
Sbjct: 164 QTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTT-LPNEIGQLQKLQDLYLSTNRL 219
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +++ D+ L L+ NR K+L ++G L LQ L + +NQL LP +I L L
Sbjct: 38 LTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
++N+ T L + L L+ ++ N++T + +E L NL + L +NQ ++
Sbjct: 98 NLHDNQFTILPKEVEKLENLKELSLGSNRLTTL-PNEIGQLKNLRVLKLTHNQFKTIPKE 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +NQLT L ++I L+ L+++DL N++
Sbjct: 157 IGQLKNLQTLNLGNNQLTA-LPNEIGQLQNLKSLDLGSNRL 196
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++G N LT L N + L +L L+L +NRL +L + L L+ L + NQL
Sbjct: 232 LQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTF 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L +N++T+L + L LQV ++ NQ+T + + E L NL +
Sbjct: 292 PKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTIPK-EIGQLQNL-QL 349
Query: 182 SLQNNQITS 190
L NNQ++S
Sbjct: 350 YLNNNQLSS 358
>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
200802841]
gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
200802841]
Length = 364
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 11/196 (5%)
Query: 52 HIHENAF---PPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++H+N F P + KL +G N LT+L N + L +L L L +N+ K++ ++
Sbjct: 98 NLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEI 157
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL ALP++I L SL +NR+T+L + L KLQ + N
Sbjct: 158 GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTN 217
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
++T + +E L NL + L +NQ+T + + + L L LYL N+LT L DI L
Sbjct: 218 RLTTL-PNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTT-LSKDIEQL 275
Query: 223 KRLRTVDLSYNKINKF 238
+ L+++DL N++ F
Sbjct: 276 QNLKSLDLWNNQLTTF 291
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 101/192 (52%), Gaps = 9/192 (4%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
LT + K P I TL L NN +T + +E ++ L +G N LT+L N +
Sbjct: 145 LTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIG 204
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L L L+L+ NRL +L ++G L LQ L + NQL LP++I L +LY +NR
Sbjct: 205 QLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNR 264
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+T+L + L L+ ++ NQ+T + E + L NL + L +NQ+T++ + L
Sbjct: 265 LTTLSKDIEQLQNLKSLDLWNNQLTTFPK-EIEQLKNLQVLDLGSNQLTTLPKEIGQLKN 323
Query: 201 LAYLYLSHNQLT 212
L L++NQLT
Sbjct: 324 LQVFELNNNQLT 335
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N +L + L +L L LN N+L L ++G L L+ L + NQ
Sbjct: 45 PLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQF 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +++ L L +NR+T+L + L L+V + NQ + + E L NL
Sbjct: 105 TILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L NNQ+T++ + + L L L L N+LT L ++I L++L+ + LS N++
Sbjct: 164 QTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTT-LPNEIGQLQKLQDLYLSTNRL 219
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +++ D+ L L+ NR K+L ++G L LQ L + +NQL LP +I L L
Sbjct: 38 LTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
++N+ T L + L L+ ++ N++T + +E L NL + L +NQ ++
Sbjct: 98 NLHDNQFTILPKEVEKLENLKELSLGSNRLTTL-PNEIGQLKNLRVLKLTHNQFKTIPKE 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +NQLT L ++I L+ L+++DL N++
Sbjct: 157 IGQLKNLQTLNLGNNQLTA-LPNEIGQLQNLKSLDLGSNRL 196
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L NN+L + ++ L LQ+L + NQL L
Sbjct: 255 LQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 314
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
P +I L NNN++T+L + L LQ + NQ++ ++
Sbjct: 315 PKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSSEEKE 363
>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
Length = 487
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 3/171 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTS+ + L L L+L +N+L SL ++G L+ L+ L + NQL +
Sbjct: 22 SLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPAEIGQLASLEWLCLIDNQLTS 81
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L LY N++TS+ + LT L + +D NQ++ V E L L
Sbjct: 82 VPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPA-EIGRLTALKG 140
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL--LDDIRGLKRLRTVD 229
+ LQ NQ+TS+ + + LT L L L HN+LT + + L++L D
Sbjct: 141 LDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVAD 191
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L + N LTS+ + L L L++ +N+L S+ ++ L+ L+ L +E N+L +
Sbjct: 160 SLEALRLQHNRLTSVPAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTS 219
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I + L L+ N+N +T L + LT L+ + NQ+T V E L +L
Sbjct: 220 LPAEIGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPA-EIGQLMSLRE 278
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ LQ NQ+TS+ + + LT L L LS NQLT + +I L L +DLSYN +
Sbjct: 279 LYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTS-VPAEIGQLTFLGCLDLSYNYLTSL 335
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L++N +T + E ++ L++G N LTS+ + LT L L L+NN+L S+ +
Sbjct: 72 LCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAE 131
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L+ L+ L +++NQL ++P+++ + L +L +NR+TS+ + L L+ +
Sbjct: 132 IGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVAD 191
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQ+T + E L +L + L++N++TS+ + + L L L+L+ N+LT L +I
Sbjct: 192 NQLTSMPA-EIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELT-GLPAEIGQ 249
Query: 222 LKRLRTVDLSYNKINKF 238
L LR + L N++
Sbjct: 250 LTSLRGLYLYGNQLTSV 266
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 3/192 (1%)
Query: 43 LLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L + +N +T + + T +R+L++ N LTSL + L L L+LN+N L L +
Sbjct: 187 LYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAE 246
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L+ L+ L + NQL ++P++I L LY N++TS+ + LT L V N+
Sbjct: 247 IGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSG 306
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQ+T V E L L + L N +TS+ + + L L L L N+L + +I
Sbjct: 307 NQLTSVPA-EIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLAS-VPAEIGQ 364
Query: 222 LKRLRTVDLSYN 233
L+ LR + L+ N
Sbjct: 365 LRSLRELFLNGN 376
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + +N LTSL + L L L L++NRL S+ ++G L L+ L + N L ++P++
Sbjct: 325 LDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLTSVPAE 384
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + + LY NN++TS+ + L L+ N+ N++T V E L +L + L
Sbjct: 385 IGQLT-VRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPA-EIGLLTSLRWLLLN 442
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQ 210
NQ+TS+ + LT L L+LS +
Sbjct: 443 GNQLTSVPGEIGQLTSLRLLFLSSGE 468
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 3/170 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LTS+ + LT L L L+ N L SL ++G L L+LL ++ N+L ++P++
Sbjct: 302 LNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAE 361
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L+ N N +TS+ + LT +++ ++ NQ+T V E L L+ ++L
Sbjct: 362 IGQLRSLRELFLNGNLLTSVPAEIGQLTVRELY-LENNQLTSVPA-EVGQLAALEQLNLS 419
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N++TS+ + + LT L +L L+ NQLT + +I L LR + LS +
Sbjct: 420 RNKLTSVPAEIGLLTSLRWLLLNGNQLTS-VPGEIGQLTSLRLLFLSSGE 468
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 116 NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
NQL ++P++I + L L N+N++TS+ + L L ++ NQ+T + E L
Sbjct: 8 NQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPA-EIGQL 66
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L+ + L +NQ+TS+ + + L L LYL NQLT
Sbjct: 67 ASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLT 103
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+L + N LTS+ + LT + L+L NN+L S+ ++G L+ L+ L + +N+L +
Sbjct: 367 SLRELFLNGNLLTSVPAEIGQLT-VRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTS 425
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
+P++I L + L L N N++TS+ G + LT L++ + + +R+
Sbjct: 426 VPAEIGLLTSLRWLLLNGNQLTSVPGEIGQLTSLRLLFLSSGEPAAIRK 474
>gi|46445672|ref|YP_007037.1| hypothetical protein pc0038 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399313|emb|CAF22762.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 953
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 4/197 (2%)
Query: 41 ITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+T L +NNN + +F ++KL + +N L SL L +L L LNNN L++L
Sbjct: 364 LTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQTLDLNNNNLRTL 423
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G L++L +L + NQL+ LP +QL L+ N++ SL G L L LQ +
Sbjct: 424 PDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLPGSLTNLVNLQTLD 483
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
++ N + + + F NL+ ++ ++L NNQ S+ S LTKL LYL +NQ+ + L +
Sbjct: 484 LNNNNLQTL-PNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYNNQI-QILPET 541
Query: 219 IRGLKRLRTVDLSYNKI 235
L L + L+YN++
Sbjct: 542 FSNLINLTELHLNYNQL 558
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R LH+ +N L SL SL L +L L LNNN L++L G L+++ L + NQ +L
Sbjct: 456 LRDLHIAYNQLQSLPGSLTNLVNLQTLDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSL 515
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++L LY NN+I L L L ++++NQ+ + + F NL NL ++
Sbjct: 516 PESFGNLTKLQCLYLYNNQIQILPETFSNLINLTELHLNYNQLQTL-PETFTNLTNLRNL 574
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+L N ++ L L+ +YL N L+ +LD +
Sbjct: 575 NLTGNNFETIPECLFHLSSECEIYLEANPLSREILDQL 612
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 25/188 (13%)
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI----- 125
N+ L +S L +L +L L NN+L++L G L+ LQ L + N+LE LP+
Sbjct: 281 NIQLLPSSFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQ 340
Query: 126 ---------------QLF---SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
Q F + L LY NNN++ L LT+L+ + +NQ+ +
Sbjct: 341 LNKLNLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSL 400
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ F NL NL ++ L NN + ++ S L +L L LS+NQL + L L +LR
Sbjct: 401 -PELFTNLINLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQL-QVLPHSFGNLTQLRD 458
Query: 228 VDLSYNKI 235
+ ++YN++
Sbjct: 459 LHIAYNQL 466
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT+L L+LNNN+L+ L G L++L+ L I NQL++LP L +L NNN
Sbjct: 360 NLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQTLDLNNNN 419
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+ +L L +L V N+ NQ+ ++ F NL L + + NQ+ S+ SL+ L
Sbjct: 420 LRTLPDSFGNLNRLHVLNLSNNQLQVLPHS-FGNLTQLRDLHIAYNQLQSLPGSLTNLVN 478
Query: 201 LAYLYLSHNQL 211
L L L++N L
Sbjct: 479 LQTLDLNNNNL 489
>gi|449116219|ref|ZP_21752670.1| hypothetical protein HMPREF9726_00655 [Treponema denticola H-22]
gi|448954106|gb|EMB34889.1| hypothetical protein HMPREF9726_00655 [Treponema denticola H-22]
Length = 496
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 17/208 (8%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LT+ +++G AL L+ N +T ++ +++L+ N LT+LN ++GLT L L
Sbjct: 234 LTALNVQGLTALQRLICYGNQLTALNMQGLTA-LKELNCSHNQLTALN--VQGLTALKEL 290
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+N+L +L Q +L+ LQ L+ NQL L ++Q + L L NR+T+L+ +
Sbjct: 291 HCWDNQLTALNVQ--SLTALQRLLCGDNQLTEL--NVQGCTDLRELGCGGNRLTALN--V 344
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
+GLT LQ N++T + L NL I NQ+T++N + GLT L LY S
Sbjct: 345 QGLTALQSLGCGSNRLTALNVQGCTALKNLGCIR---NQLTALN--VQGLTALRGLYCSG 399
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
N LTE +++GL LRT+D N++N
Sbjct: 400 NPLTEL---NVQGLTALRTLDCCNNQLN 424
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 46 VNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
+ N +T ++ P ++ L N LT+LN ++GLT L L N+L L Q L
Sbjct: 125 IQNKLTALNVQGLPA-LQVLECKRNQLTALN--VQGLTALQSLGCGGNQLTELNVQ--GL 179
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ L+ L NQL AL ++Q + LG+L+ N N++T+L+ ++G T L+ ++NQ+T
Sbjct: 180 TALKELYCSYNQLTAL--NVQGLTALGTLHCNGNQLTALN--VQGCTVLKELFCEYNQLT 235
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ Q L L + NQ+T++N + GLT L L SHNQLT + + LK L
Sbjct: 236 ALN---VQGLTALQRLICYGNQLTALN--MQGLTALKELNCSHNQLTALNVQGLTALKEL 290
Query: 226 RTVD 229
D
Sbjct: 291 HCWD 294
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 14/212 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LT+ +++G PAL L N +T ++ ++ L G N LT LN ++GLT L L
Sbjct: 129 LTALNVQGLPALQVLECKRNQLTALNVQGLTA-LQSLGCGGNQLTELN--VQGLTALKEL 185
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+ + N+L +L Q L+ L L NQL AL ++Q + L L+ N++T+L+ +
Sbjct: 186 YCSYNQLTALNVQ--GLTALGTLHCNGNQLTAL--NVQGCTVLKELFCEYNQLTALN--V 239
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
+GLT LQ NQ+T + Q L L ++ +NQ+T++N + GLT L L+
Sbjct: 240 QGLTALQRLICYGNQLTALN---MQGLTALKELNCSHNQLTALN--VQGLTALKELHCWD 294
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
NQLT + + L+RL D ++N G
Sbjct: 295 NQLTALNVQSLTALQRLLCGDNQLTELNVQGC 326
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LT+ +++G AL TL N +T ++ +++L +N LT+LN ++GLT L L
Sbjct: 192 LTALNVQGLTALGTLHCNGNQLTALNVQGCT-VLKELFCEYNQLTALN--VQGLTALQRL 248
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
N+L +L Q L+ L+ L NQL AL ++Q + L L+ +N++T+L+ +
Sbjct: 249 ICYGNQLTALNMQ--GLTALKELNCSHNQLTAL--NVQGLTALKELHCWDNQLTALN--V 302
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
+ LT LQ NQ+T + Q +L + N++T++N + GLT L L
Sbjct: 303 QSLTALQRLLCGDNQLTELN---VQGCTDLRELGCGGNRLTALN--VQGLTALQSLGCGS 357
Query: 209 NQLTEFLLDDIRGLKRLRTV 228
N+LT + LK L +
Sbjct: 358 NRLTALNVQGCTALKNLGCI 377
>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
Length = 398
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G+N LT+L N + L +L L+L +N+L +L ++G L KLQ L + N+L L
Sbjct: 184 LQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTL 243
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L LY +N++T L + L LQ + N++T + +D + L NL S+
Sbjct: 244 PNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD-IEQLQNLKSL 302
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L L L L NQLT L +I LK L+ +L+ N++
Sbjct: 303 DLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTT-LPKEIGQLKNLQVFELNNNQL 355
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 102/182 (56%), Gaps = 2/182 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L L NN+L +L ++G L LQ L + NQL AL
Sbjct: 138 LQELYLRDNQLTTLPTEIGQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTAL 197
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L LY +N++T+L + L KLQ ++ N++T + +E L NL +
Sbjct: 198 PNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTL-PNEIGQLQNLQDL 256
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +NQ+T + + + L L LYL N+LT L DI L+ L+++DL N++ F
Sbjct: 257 YLGSNQLTILPNEIGQLKNLQTLYLRSNRLTT-LSKDIEQLQNLKSLDLWNNQLTTFPKE 315
Query: 242 NE 243
E
Sbjct: 316 IE 317
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 23/199 (11%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L N + L +L L+L+ N+LK+L ++G L L++L + NQL
Sbjct: 43 PLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQL 102
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT------------- 165
E LP++I+ L LY + N++ +L +R L LQ + NQ+T
Sbjct: 103 ETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQ 162
Query: 166 ---------MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
M +E L NL +++L NQ+T++ + + L L LYL NQLT L
Sbjct: 163 RLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTA-LP 221
Query: 217 DDIRGLKRLRTVDLSYNKI 235
++I L++L+ + LS N++
Sbjct: 222 NEIGQLQKLQELSLSTNRL 240
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L N + L +L L+L +N+L L ++G L LQ L + N+L L
Sbjct: 230 LQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTL 289
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
DI+ L SL NN++T+ + L LQV ++ NQ+T + + E L NL
Sbjct: 290 SKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPK-EIGQLKNLQVF 348
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+T++ + L L LYL NQL+ + IR L
Sbjct: 349 ELNNNQLTTLPKEIGQLQNLQELYLIDNQLSSEEKERIRKL 389
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +++ D+ L L+ +LK+L ++ L LQ L + NQL+ LP +I L L
Sbjct: 36 LTEAIQNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVL 95
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ +L + L LQ + +NQ+ + + E + L NL + L++NQ+T++ +
Sbjct: 96 ELIHNQLETLPNEIEQLKDLQRLYLSYNQLKTLPK-EIRQLQNLQELYLRDNQLTTLPTE 154
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +NQL L ++I LK L+T++L YN++
Sbjct: 155 IGQLKNLQRLQLWNNQLMT-LPEEIGQLKNLQTLNLGYNQL 194
>gi|421114928|ref|ZP_15575342.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410013649|gb|EKO71726.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 234
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 16/189 (8%)
Query: 48 NNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
N+T +N P ++ L + N L +L + L L WL L+ N+LK+L ++ L K
Sbjct: 27 QNLTKALKN--PTDVQTLDLSNNQLITLPKEIGQLKGLEWLSLSKNQLKTLPKEIEQLQK 84
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L + NQL LP +I +L L + N++T+L + L +LQV ++ NQ+T +
Sbjct: 85 LRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIGQLKELQVLDLSNNQLTTL 144
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT-------------EF 214
+E + L L + L+NNQ+T++ + L KL L LS NQLT E
Sbjct: 145 -PNEIEFLKRLQELYLRNNQLTTLPKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEEL 203
Query: 215 LLDDIRGLK 223
LDDI LK
Sbjct: 204 FLDDIPVLK 212
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 25/151 (16%)
Query: 108 LQLLVIEQNQLEA-----------------------LPSDIQLFSQLGSLYANNNRITSL 144
+Q L + NQL LP +I+ +L LY ++N++T+L
Sbjct: 39 VQTLDLSNNQLITLPKEIGQLKGLEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQLTTL 98
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ L +LQ ++ NQ+T + + E L L + L NNQ+T++ + + L +L L
Sbjct: 99 PKEIGYLKELQELDLSRNQLTTLPK-EIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQEL 157
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
YL +NQLT L I LK+L+ +DLS N++
Sbjct: 158 YLRNNQLT-TLPKGIGYLKKLQKLDLSRNQL 187
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 29 LTSDDLKGTPALIT-------LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
L+ + LK P I L L +N +T + E + +++L + N LT+L +
Sbjct: 67 LSKNQLKTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIG 126
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L +L L L+NN+L +L ++ L +LQ L + NQL LP I +L L + N+
Sbjct: 127 QLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKKLQKLDLSRNQ 186
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+T+L + L KL+ +D + + + Q L
Sbjct: 187 LTTLPKEIETLKKLEELFLDDIPVLKSQEKKIQKL 221
>gi|156550592|ref|XP_001603998.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Nasonia
vitripennis]
Length = 582
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
++L + +++T+L NS+R LT L +L N+L +L ++G L+ L+ L + +N L +LP
Sbjct: 104 KRLDLSKSSITNLPNSVRDLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENSLTSLP 163
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
++ QL L +N++ + ++ LT L + FN++ V D +NL NL +S
Sbjct: 164 DTLENLKQLKVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVRYV-SDNIRNLTNLTMLS 222
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ N+I + + + LT L +SHN L E L +I +L T+DL +N++
Sbjct: 223 LRENKIKELPAGIGKLTNLVTFDVSHNHL-EHLPAEIGNCDQLSTLDLQHNEL 274
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N L + + ++ L +L L L+NN LK + + +LSKL++L +E+N++E+LP+
Sbjct: 407 ELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRIPASIASLSKLRVLDLEENKIESLPN 466
Query: 124 DIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+I L L +N++TSL G L LT L V + N + +E L NLD
Sbjct: 467 EIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTHLSVGENNLNYLP----EEIGTLENLDC 522
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ + +N + ++ L+ T L+ + + + L++ + + G
Sbjct: 523 LYINDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAG 564
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
+ LT LN + N+L +L GT + L + NQL +P DIQ L L +NN
Sbjct: 380 KNLTKLN---MKENQLTALPLDTGTWINMVELNLGTNQLVKIPDDIQYLQNLEILILSNN 436
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
+ + + L+KL+V +++ N+I + +E L +L + LQ+NQ+TS+ ++ LT
Sbjct: 437 LLKRIPASIASLSKLRVLDLEENKIESL-PNEIGFLRDLQKLILQSNQVTSLPRAIGHLT 495
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRL 225
L +L + N L +L ++I L+ L
Sbjct: 496 NLTHLSVGENNLN-YLPEEIGTLENL 520
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 38/257 (14%)
Query: 17 LIDLEPETGS-----------HPLTS--DDLKGTPALITLLLVNNNITHIHENAFPPT-I 62
L+ L PE G + LTS D L+ L L L +N + I + + T +
Sbjct: 136 LVTLPPEIGCLANLKTLALSENSLTSLPDTLENLKQLKVLDLRHNKLNEIPDVVYKLTSL 195
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
L + FN + +++++R LT+L L L N++K L +G L+ L + N LE LP
Sbjct: 196 TTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLP 255
Query: 123 SDIQLFSQLGSLYANNN-----------------------RITSLDGLLRGLTKLQVFNM 159
++I QL +L +N R++S+ L + F++
Sbjct: 256 AEIGNCDQLSTLDLQHNELLDIPETIGNLVSVTRLGLRYNRLSSIPKSLANCKLMDEFSV 315
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ++ + +L NL +I+L N T+ S S T + + L HN++ +
Sbjct: 316 EGNQVSQLPDGLLSSLSNLKTITLSRNAFTAYPSGGPSQFTNVYSINLEHNKIDKIPYGI 375
Query: 219 IRGLKRLRTVDLSYNKI 235
K L +++ N++
Sbjct: 376 FSRAKNLTKLNMKENQL 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+S+ SL ++ + N++ L +G L +LS L+ + + +N
Sbjct: 286 SVTRLGLRYNRLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSRNAFT 345
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
A PS F+ + S+ +N+I + G+ L NM NQ+T + D + N
Sbjct: 346 AYPSGGPSQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDTGTWI-N 404
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+ + + L L L LS+N L + + I L +LR +DL NKI
Sbjct: 405 MVELNLGTNQLVKIPDDIQYLQNLEILILSNN-LLKRIPASIASLSKLRVLDLEENKI 461
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 11/220 (5%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L + +K PA I L LV +++H H P I L + N L + ++
Sbjct: 223 LRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIPETIG 282
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 139
L + L L NRL S+ L + +E NQ+ LP + S L ++ + N
Sbjct: 283 NLVSVTRLGLRYNRLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSRN 342
Query: 140 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
T+ G T + N++ N+I + F NL ++++ NQ+T++
Sbjct: 343 AFTAYPSGGPSQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDTGTW 402
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L NQL + + DDI+ L+ L + LS N + +
Sbjct: 403 INMVELNLGTNQLVK-IPDDIQYLQNLEILILSNNLLKRI 441
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 15 LNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLT 73
+N+++L T DD++ L L+L NN + I + A +R L + N +
Sbjct: 403 INMVELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRIPASIASLSKLRVLDLEENKIE 462
Query: 74 SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS 133
SL N + L DL L L +N++ SL +G L+ L L + +N L LP +I L
Sbjct: 463 SLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTHLSVGENNLNYLPEEIGTLENLDC 522
Query: 134 LYANNN 139
LY N+N
Sbjct: 523 LYINDN 528
>gi|195056017|ref|XP_001994909.1| GH17496 [Drosophila grimshawi]
gi|261277886|sp|B4JTV9.1|SUR8_DROGR RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|193892672|gb|EDV91538.1| GH17496 [Drosophila grimshawi]
Length = 622
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 110/212 (51%), Gaps = 2/212 (0%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
T HP ++ T ++ + + ++ + I++L + +++T L N++R
Sbjct: 105 TVKHPESNKPKPTTKKIVKNIQADQDVIKALQRCRDEGIKRLDLSKSSITVLPNTVRECV 164
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L L+L +N++ L ++G L L+ L + +N L +LP ++ +QL L +N++
Sbjct: 165 HLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNKLAE 224
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ ++ L L + FN+IT V D+ + L NL +SL+ N+I + S++ L L
Sbjct: 225 IPSVIYRLRSLTTLYLRFNRITTV-ADDLRQLVNLTMLSLRENKIKELGSAIGALVNLTT 283
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +SHN L E L +DI L +DL +N++
Sbjct: 284 LDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 314
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++ FN +T++ + LR L +L L L N++K L +G L L L + N LE
Sbjct: 234 SLTTLYLRFNRITTVADDLRQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEH 293
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP DI L +L +N + + + L L + +N++ V +N ++D
Sbjct: 294 LPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLNCVPVS-LKNCKSMDE 352
Query: 181 ISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+++ N IT + + L+ L+ L + LS NQ T + + +++L +N+I+K
Sbjct: 353 FNVEGNGITQLPDGMLASLSALTSITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKI 411
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L KL++L +E+N++E LP
Sbjct: 447 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 506
Query: 124 DIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQV 156
+I L +L L N+IT L G L LT L V
Sbjct: 507 EIGLLHELQRLILQTNQITMLPRSVGHLSNLTHLSV 542
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L + SL+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 326 SLVRLGLRYNRLNCVPVSLKNCKSMDEFNVEGNGITQLPDGMLASLSALTSITLSRNQFT 385
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 386 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-VGT 441
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L++LR +DL N+
Sbjct: 442 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRKLRILDLEENR 500
Query: 235 I 235
I
Sbjct: 501 I 501
>gi|47219010|emb|CAG02048.1| unnamed protein product [Tetraodon nigroviridis]
Length = 901
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 42 TLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLR----GLTDLNWLFLNNNRLKS 97
TL L +N++ + +FP +R + S + S + G L +LNNN++ +
Sbjct: 69 TLDLSHNDVGDLRGRSFPAGLRIKDLWVPPQASASPSAKRVPSGTLLLCSRYLNNNKIGA 128
Query: 98 LE-GQLGTL-SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G L L S LQ+L + +N++ +P +L L N NRI ++GL +GL+ L
Sbjct: 129 LEPGALDHLGSTLQVLRLSRNRISQIPVRAFQLPRLTLLELNRNRIRQVEGLTFQGLSSL 188
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTE 213
+V + N I+ + F +L + ++ L N +T +NS SL GLT L L+LS+N +
Sbjct: 189 EVLKLQRNSISKLTDGAFWDLAKMKALHLDYNSLTEVNSGSLYGLTSLQQLFLSNNSIAR 248
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D + ++LR ++LS+N + +
Sbjct: 249 INPDGWKFCQKLRELNLSHNNLTRL 273
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 22 PETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP---PTIRKLHVGFNNLTSLNNS 78
P+ + P GT L + L NN I + A T++ L + N ++ +
Sbjct: 98 PQASASPSAKRVPSGTLLLCSRYLNNNKIGALEPGALDHLGSTLQVLRLSRNRISQIPVR 157
Query: 79 LRGLTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYA 136
L L L LN NR++ +EG LS L++L +++N + L +++ +L+
Sbjct: 158 AFQLPRLTLLELNRNRIRQVEGLTFQGLSSLEVLKLQRNSISKLTDGAFWDLAKMKALHL 217
Query: 137 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-S 194
+ N +T ++ G L GLT LQ + N I + D ++ L ++L +N +T ++ S
Sbjct: 218 DYNSLTEVNSGSLYGLTSLQQLFLSNNSIARINPDGWKFCQKLRELNLSHNNLTRLDEGS 277
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
LS L +L+ L L HN ++ RGL+
Sbjct: 278 LSVLGELSSLRLGHNAISHITEGAFRGLR 306
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 55/248 (22%)
Query: 45 LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQ 101
L +N +T I A P +++L + N LTS+ + + + + L+L++N++ +++ G+
Sbjct: 1 LSHNKLTTIDAEALDNLPNLKELRLDHNALTSIPHLGQAASKILSLYLHHNKIGAIDGGR 60
Query: 102 LGTLSKLQLLVIEQN-----------------------QLEALPSDIQLFSQ---LGSLY 135
+ LS ++ L + N Q A PS ++ S L S Y
Sbjct: 61 MAELSSVETLDLSHNDVGDLRGRSFPAGLRIKDLWVPPQASASPSAKRVPSGTLLLCSRY 120
Query: 136 ANNNRITSLD-GLLRGL-TKLQVFNMDFNQITM--------------------VRRDE-- 171
NNN+I +L+ G L L + LQV + N+I+ +R+ E
Sbjct: 121 LNNNKIGALEPGALDHLGSTLQVLRLSRNRISQIPVRAFQLPRLTLLELNRNRIRQVEGL 180
Query: 172 -FQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
FQ L +L+ + LQ N I+ + + + L K+ L+L +N LTE + GL L+ +
Sbjct: 181 TFQGLSSLEVLKLQRNSISKLTDGAFWDLAKMKALHLDYNSLTEVNSGSLYGLTSLQQLF 240
Query: 230 LSYNKINK 237
LS N I +
Sbjct: 241 LSNNSIAR 248
Score = 42.4 bits (98), Expect = 0.19, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N++T + + NL NL + L +N +TS+ +K+ LYL HN++
Sbjct: 1 LSHNKLTTIDAEALDNLPNLKELRLDHNALTSIPHLGQAASKILSLYLHHNKIGAIDGGR 60
Query: 219 IRGLKRLRTVDLSYNKINKFGTRN 242
+ L + T+DLS+N + R+
Sbjct: 61 MAELSSVETLDLSHNDVGDLRGRS 84
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 90 LNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GL 147
L++N+L +++ + L L L+ L ++ N L ++P Q S++ SLY ++N+I ++D G
Sbjct: 1 LSHNKLTTIDAEALDNLPNLKELRLDHNALTSIPHLGQAASKILSLYLHHNKIGAIDGGR 60
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL--QNNQITSMNSSLSGLTKLAYLY 205
+ L+ ++ ++ N + +R F + + + Q + S SG L Y
Sbjct: 61 MAELSSVETLDLSHNDVGDLRGRSFPAGLRIKDLWVPPQASASPSAKRVPSGTLLLCSRY 120
Query: 206 LSHNQLTEFLLDDIRGL-KRLRTVDLSYNKINKFGTR 241
L++N++ + L L+ + LS N+I++ R
Sbjct: 121 LNNNKIGALEPGALDHLGSTLQVLRLSRNRISQIPVR 157
>gi|320164539|gb|EFW41438.1| proto-oncogene tyrosine-protein kinase FYN [Capsaspora owczarzaki
ATCC 30864]
Length = 940
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 16/207 (7%)
Query: 30 TSDDLKGTPALIT-----LLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRG 81
+S L P+ I L L NN+I + +AF ++ L + N +TS+ + +
Sbjct: 39 SSKSLTAIPSAIPASTQHLNLFNNHIASVSASAFAGLTSLTYLSLESNAITSIPDTAFAD 98
Query: 82 LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN-- 138
LT LNWL + +N L SL L+ + +L + QN+L ++PS+ LF+ L +L N
Sbjct: 99 LTALNWLLMTSNFLTSLSASTFAGLTAVTVLSLFQNELTSIPSN--LFTDLTALRQLNLG 156
Query: 139 -NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SL 195
N +TSL GLT L + ++ NQIT V + F L L + L NQITS+++ +
Sbjct: 157 YNDLTSLPLSAFTGLTALNILSLHRNQITTVPANMFPGLSALKELYLHQNQITSVSANAF 216
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+GL L LYL +N T +GL
Sbjct: 217 TGLNTLTSLYLGNNPFTTLPPGLFKGL 243
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 88 LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLD 145
L L NN + S+ L+ L L +E N + ++P + + L L +N +TSL
Sbjct: 57 LNLFNNHIASVSASAFAGLTSLTYLSLESNAITSIPDTAFADLTALNWLLMTSNFLTSLS 116
Query: 146 G-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAY 203
GLT + V ++ N++T + + F +L L ++L N +TS+ S+ +GLT L
Sbjct: 117 ASTFAGLTAVTVLSLFQNELTSIPSNLFTDLTALRQLNLGYNDLTSLPLSAFTGLTALNI 176
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L NQ+T + GL L+ + L N+I
Sbjct: 177 LSLHRNQITTVPANMFPGLSALKELYLHQNQI 208
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L A+PS I +Q +L+ NN I S+ GLT L +++ N IT + F +L
Sbjct: 43 LTAIPSAIPASTQHLNLF--NNHIASVSASAFAGLTSLTYLSLESNAITSIPDTAFADLT 100
Query: 177 NLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ + + +N +TS++ S+ +GLT + L L N+LT + L LR ++L YN +
Sbjct: 101 ALNWLLMTSNFLTSLSASTFAGLTAVTVLSLFQNELTSIPSNLFTDLTALRQLNLGYNDL 160
Query: 236 NKF 238
Sbjct: 161 TSL 163
>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 379
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 24/222 (10%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSL 75
L ++ LK P I TL+L N +T FP I +KL++ +N LT+L
Sbjct: 101 LWNNQLKNLPKEIGQLQNLQTLILSVNRLT-----TFPQEIGQLKNLQKLNLDYNQLTTL 155
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
+ L +L L L+ N+L +L ++G L LQ L +++N+L+ALP++I L LY
Sbjct: 156 LQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELY 215
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLDSISLQNNQITSMNS 193
+NN++T L + L LQ + NQ+T++ ++ + QNL L S+ NN++T +
Sbjct: 216 LSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSV---NNELTILPQ 272
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL YLYLSHNQLT L +I L+ L+ + L+ N++
Sbjct: 273 EIGQLQKLQYLYLSHNQLTT-LPKEIGQLENLQELYLNDNQL 313
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N L +L N + L +L L+L+NN+L L ++G L LQ L++ NQL L
Sbjct: 188 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY+ NN +T L + L KLQ + NQ+T + + E L NL +
Sbjct: 248 PKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPK-EIGQLENLQEL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L +NQLT L +I L+ L+ + L+ N++
Sbjct: 307 YLNDNQLTTLPKEIGQLKNLQTFISFNNQLT-MLPQEIGQLQNLQWLKLNNNQL 359
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L ++ L +L L L NN+ K+L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-------- 170
+ LP +I L +L + NR+T+ + L LQ N+D+NQ+T + ++
Sbjct: 107 KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQ 166
Query: 171 --------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
E L NL ++L N++ ++ + + L L LYLS+NQLT L
Sbjct: 167 KLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLT-ILP 225
Query: 217 DDIRGLKRLRTVDLSYNKI 235
++I LK L+ + L N++
Sbjct: 226 EEIGQLKNLQALILGDNQL 244
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L NN +T + E ++ L +G N LT L + L +L L+ NN L L +
Sbjct: 214 LYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQE 273
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L KLQ L + NQL LP +I L LY N+N++T+L + L LQ F
Sbjct: 274 IGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFN 333
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITS 190
NQ+TM+ + E L NL + L NNQ++S
Sbjct: 334 NQLTMLPQ-EIGQLQNLQWLKLNNNQLSS 361
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L++ +L +L ++ L L+ L + NQ + LP +I L L
Sbjct: 40 LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
NN++ +L + L LQ + N++T + E L NL ++L NQ+T++
Sbjct: 100 NLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQ-EIGQLKNLQKLNLDYNQLTTLLQE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +NQLT LL +I LK L+ ++L N++
Sbjct: 159 IGQLKNLQKLNLDYNQLTT-LLQEIGQLKNLQKLNLDKNRL 198
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L L +L+L++N+L +L ++G L LQ L + NQL LP +I
Sbjct: 265 NELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLK 324
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
L + + NN++T L + L LQ ++ NQ++ + Q L
Sbjct: 325 NLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEERIQKL 370
>gi|418701702|ref|ZP_13262624.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759266|gb|EKR25481.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 287
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 102/174 (58%), Gaps = 7/174 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N +L + L +L L L NN+LK+L ++G L LQ L +++N+L+AL
Sbjct: 73 LKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQKLNLDKNRLKAL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I L LY +NN++T L + L LQ + NQ+T++ ++ + QNL L
Sbjct: 133 PNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLY 192
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
S+ NN++T + + L KL YLYLSHNQLT L +I LK L+T +S+N
Sbjct: 193 SV---NNELTILPQEIGQLQKLQYLYLSHNQLTT-LPKEIGQLKNLQTF-ISFN 241
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++KL++ N L +L N + L +L L+L+NN+L L ++G L LQ L++ NQL
Sbjct: 118 SLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTI 177
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L LY+ NN +T L + L KLQ + NQ+T + + E L NL +
Sbjct: 178 LPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPK-EIGQLKNLQT 236
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
NNQ+T + + + L L +L L++NQL+ + IR L
Sbjct: 237 FISFNNQLTMLPNEIGQLQNLQWLKLNNNQLSFQEEERIRKL 278
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L++ +L +L ++ L L+ L + NQ + LP +I L L
Sbjct: 40 LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
NN++ +L + L LQ N+D N++ + +E L NL + L NNQ+T +
Sbjct: 100 NLWNNQLKNLPKEIGQLQSLQKLNLDKNRLKAL-PNEIGQLQNLQELYLSNNQLTILPEE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ L L L L NQLT L +I L+ L+
Sbjct: 159 IGQLKNLQALILGDNQLT-ILPKEIGQLQNLK 189
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L NN +T + E ++ L +G N LT L + L +L L+ NN L L +
Sbjct: 145 LYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQE 204
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L KLQ L + NQL LP +I L + + NN++T L + L LQ ++
Sbjct: 205 IGQLQKLQYLYLSHNQLTTLPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNN 264
Query: 162 NQITMVRRDEFQNL 175
NQ++ + + L
Sbjct: 265 NQLSFQEEERIRKL 278
>gi|320168566|gb|EFW45465.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 981
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 112/206 (54%), Gaps = 5/206 (2%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
G +L L L N IT++ AF P ++++ + +N +TSL +L +T L L +
Sbjct: 151 FTGLTSLTFLALGGNLITNVAAAAFTSLPAVQQMLLDYNQITSLPTTLSSMTALRQLDVT 210
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG-LLR 149
N+L ++ + +L+ L L + +NQ ++P++ + L SL+ + N+ITS+
Sbjct: 211 GNQLTNIPSAIASLTALVYLALGENQFTSVPANAFSTLAGLTSLFLDYNQITSISANAFT 270
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GL+ L+ ++ NQIT + + F L L + L +NQITS+++ + + L L+Y+ L
Sbjct: 271 GLSALKNLHLYGNQITSISANAFTGLSALTQLLLLDNQITSISANAFTSLNTLSYINLQR 330
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNK 234
N++T + GL L T+ L+YN
Sbjct: 331 NKITSISANTFTGLAALTTLALNYNP 356
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 38 PALITLLLVN------NNITHIHENAF--PPTIRKLHVGFNNLTSL-NNSLRGLTDLNWL 88
PAL +L +N N IT I + F + +L + N +TS+ + GLT L +L
Sbjct: 101 PALASLTALNSLYIGLNQITRITASLFINQAALTELDLSGNQITSIPGTAFTGLTSLTFL 160
Query: 89 FLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L N + ++ T L +Q ++++ NQ+ +LP+ + + L L N++T++
Sbjct: 161 ALGGNLITNVAAAAFTSLPAVQQMLLDYNQITSLPTTLSSMTALRQLDVTGNQLTNIPSA 220
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYL 206
+ LT L + NQ T V + F L L S+ L NQITS+++ + +GL+ L L+L
Sbjct: 221 IASLTALVYLALGENQFTSVPANAFSTLAGLTSLFLDYNQITSISANAFTGLSALKNLHL 280
Query: 207 SHNQLTEFLLDDIRG 221
NQ+T + G
Sbjct: 281 YGNQITSISANAFTG 295
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 58 FPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQ 115
P T ++LH+ N L+++ S GL+ L LFL+ N + T LS L +
Sbjct: 471 IPVTTKELHLQNNQLSNVPASAFTGLSALEQLFLSYNPISGFPAAAITGLSALTSFSCQF 530
Query: 116 NQLEALPSDIQLFSQLGSL---YANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDE 171
Q+ +P++ F+ L +L Y +NRI S+ + LT+L ++ N IT +
Sbjct: 531 TQITEIPTNA--FTGLIALQGVYLGSNRINSISANVFTALTELTYLDLQNNTITSISASA 588
Query: 172 FQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
F L L ++L +NQITS+++ + + LT L + L+ N T +GL L +
Sbjct: 589 FTGLSALTVLTLASNQITSLSANTFTVLTSLTMVTLNGNPFTTLPPGLFKGLPNLLRLTS 648
Query: 231 SY 232
SY
Sbjct: 649 SY 650
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNW--------LFLNNNRLKSLEGQLGT-LSKLQ 109
PP V + T+++ S R LT + L L NN+L ++ T LS L+
Sbjct: 441 PPACGTGGVCTCSGTTVDCSRRSLTTVPGGIPVTTKELHLQNNQLSNVPASAFTGLSALE 500
Query: 110 LLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMV 167
L + N + P+ I S L S +IT + GL LQ + N+I +
Sbjct: 501 QLFLSYNPISGFPAAAITGLSALTSFSCQFTQITEIPTNAFTGLIALQGVYLGSNRINSI 560
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ F L L + LQNN ITS+++S +GL+ L L L+ NQ+T + L L
Sbjct: 561 SANVFTALTELTYLDLQNNTITSISASAFTGLSALTVLTLASNQITSLSANTFTVLTSLT 620
Query: 227 TVDLSYNK 234
V L+ N
Sbjct: 621 MVTLNGNP 628
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRL 95
AL+ L L N T + NAF + L + +N +TS++ N+ GL+ L L L N++
Sbjct: 226 ALVYLALGENQFTSVPANAFSTLAGLTSLFLDYNQITSISANAFTGLSALKNLHLYGNQI 285
Query: 96 KSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSL-YAN--NNRITSLDG-LLRG 150
S+ T LS L L++ NQ+ ++ ++ F+ L +L Y N N+ITS+ G
Sbjct: 286 TSISANAFTGLSALTQLLLLDNQITSISANA--FTSLNTLSYINLQRNKITSISANTFTG 343
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHN 177
L L +++N T + FQ L+N
Sbjct: 344 LAALTTLALNYNPFTTLPPGLFQGLNN 370
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 183 LQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
LQNNQ++++ S+ +GL+ L L+LS+N ++ F I GL L + + +I + T
Sbjct: 480 LQNNQLSNVPASAFTGLSALEQLFLSYNPISGFPAAAITGLSALTSFSCQFTQITEIPT 538
>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 402
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 8/185 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I ++L++GFN LT+L + L +L L L +N L +L ++G LSKLQ
Sbjct: 200 TFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQK 259
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL LP +I +L LY NN + +L + L KLQ ++ NQIT +
Sbjct: 260 LYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPK- 318
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL ++L NQ+T++ + L L L L NQL L ++ L++LR ++L
Sbjct: 319 EIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLAT-LPKEVGQLQKLRKLNL 377
Query: 231 SYNKI 235
N I
Sbjct: 378 YNNPI 382
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 6/176 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++GFN LT L + + L +L L L+ N+L L ++G L LQ+L ++ N+L L
Sbjct: 119 LQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTIL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P I L L + N++T+ + L KLQ N+ FN++T +R + + QNL LD
Sbjct: 179 PEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILD 238
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
IS N +T++ + L+KL LYL NQLT L ++I LK+L+ + L N +
Sbjct: 239 LIS---NPLTTLPKEIGQLSKLQKLYLYGNQLTT-LPEEIGQLKKLQELYLGNNPL 290
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P R L++ + L +L+ + L +L L+LN N+L +L ++G L L
Sbjct: 39 NLTEALQN--PKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q+L + N+L LP +I L L NR+T L + L LQV N+D N++T++
Sbjct: 97 QVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL- 155
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
++ L NL ++L N++T + + L L L NQLT F +I L++L+ +
Sbjct: 156 PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTF-PKEIGQLQKLQEL 214
Query: 229 DLSYNKI 235
+L +N++
Sbjct: 215 NLGFNRL 221
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+ + L L L L NRL +L ++ L LQ+L + N L LP +I S
Sbjct: 196 NQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLS 255
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L LY N++T+L + L KLQ + N + + + E + L L ++ L+ NQIT
Sbjct: 256 KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPK-EIEQLQKLQTLYLEGNQIT 314
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L L L NQLT L +I L+ L+ ++L +N++
Sbjct: 315 TFPKEIGQLQNLQELNLGFNQLTT-LPQEIGQLQNLQELNLEFNQL 359
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 27/168 (16%)
Query: 26 SHPLTS--DDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGL 82
S+PLT+ ++ L L L N +T + E +++L++G N L +L + L
Sbjct: 241 SNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQL 300
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L L+L N++ + ++G L LQ L + NQL LP +I G
Sbjct: 301 QKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEI------GQ--------- 345
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L LQ N++FNQ+ + + E L L ++L NN I S
Sbjct: 346 --------LQNLQELNLEFNQLATLPK-EVGQLQKLRKLNLYNNPIAS 384
>gi|418755269|ref|ZP_13311476.1| leucine rich repeat protein, partial [Leptospira santarosai str.
MOR084]
gi|409964280|gb|EKO32170.1| leucine rich repeat protein, partial [Leptospira santarosai str.
MOR084]
Length = 199
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L LN N+L +L ++G L LQ L +++NQL L
Sbjct: 8 LQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTL 67
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L+ NN++T+L + L KLQ ++ NQ+T + + E NL NL +
Sbjct: 68 PKEIRKLQNLQGLHLGNNKLTALPIEIENLQKLQWLGLNKNQLTTIPK-EIGNLQNLKEL 126
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+L +NQ+T++ + L KL L L +NQLT L +I L+ L+ + L N
Sbjct: 127 NLSSNQLTTIPKEIENLQKLETLDLYNNQLT-TLPKEIGKLQNLQDLYLGGN 177
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 2/154 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L+LN N+L +L ++G L LQ LV+ +NQL LP +I L L + N++
Sbjct: 5 LQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQL 64
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T+L +R L LQ ++ N++T + E +NL L + L NQ+T++ + L L
Sbjct: 65 TTLPKEIRKLQNLQGLHLGNNKLTALPI-EIENLQKLQWLGLNKNQLTTIPKEIGNLQNL 123
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS NQLT + +I L++L T+DL N++
Sbjct: 124 KELNLSSNQLT-TIPKEIENLQKLETLDLYNNQL 156
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
++G L LQ L + +NQL ALP +I L L N N++T+L + L LQ N+D
Sbjct: 1 EIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLD 60
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQ+T + + E + L NL + L NN++T++ + L KL +L L+ NQLT + +I
Sbjct: 61 KNQLTTLPK-EIRKLQNLQGLHLGNNKLTALPIEIENLQKLQWLGLNKNQLT-TIPKEIG 118
Query: 221 GLKRLRTVDLSYNKI 235
L+ L+ ++LS N++
Sbjct: 119 NLQNLKELNLSSNQL 133
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
P IRKL H+G N LT+L + L L WL LN N+L ++ ++G L L+
Sbjct: 66 TLPKEIRKLQNLQGLHLGNNKLTALPIEIENLQKLQWLGLNKNQLTTIPKEIGNLQNLKE 125
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL +P +I+ +L +L NN++T+L + L LQ + N + +++
Sbjct: 126 LNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNPSLIDQKE 185
Query: 171 EFQNL 175
+ Q L
Sbjct: 186 KIQKL 190
>gi|359728061|ref|ZP_09266757.1| hypothetical protein Lwei2_14527 [Leptospira weilii str.
2006001855]
Length = 289
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ F L++L + L +L L L++N L +L ++ L KLQ L + +NQL
Sbjct: 47 PLKVRVLNLSFQKLSTLPKEIGELQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L +LY N++T L + L LQ + NQ+T++ + E L NL
Sbjct: 107 TTLPKEIGQLKSLQTLYLLANQLTVLPNEIGQLQNLQTLYLSQNQLTILPK-EIAKLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L NQ+T++ S + L L L L HN+LT L +I L+ L+ +DLS+N++
Sbjct: 166 QTLNLNGNQLTTLPSEIGQLQNLQRLDLFHNKLT-VLPKEILQLQNLQRLDLSHNQL 221
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L +R L L L L N+L +L ++G L LQ L + NQL L
Sbjct: 73 LQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTVL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L +LY + N++T L + L LQ N++ NQ+T + E L NL +
Sbjct: 133 PNEIGQLQNLQTLYLSQNQLTILPKEIAKLQNLQTLNLNGNQLTTL-PSEIGQLQNLQRL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +N++T + + L L L LSHNQLT L +I L+ L+ ++L+ N++ +
Sbjct: 192 DLFHNKLTVLPKEILQLQNLQRLDLSHNQLT-ILPKEIAKLQNLQELNLNGNRLTTLPSE 250
Query: 242 NE 243
E
Sbjct: 251 IE 252
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ N LT L N + L +L L+L+ N+L L ++ L LQ L + NQL
Sbjct: 118 SLQTLYLLANQLTVLPNEIGQLQNLQTLYLSQNQLTILPKEIAKLQNLQTLNLNGNQLTT 177
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LPS+I L L +N++T L + L LQ ++ NQ+T++ + E L NL
Sbjct: 178 LPSEIGQLQNLQRLDLFHNKLTVLPKEILQLQNLQRLDLSHNQLTILPK-EIAKLQNLQE 236
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
++L N++T++ S + L KL L L N+ + + IR L
Sbjct: 237 LNLNGNRLTTLPSEIEFLKKLKILRLYQNEFSSEEKERIRKL 278
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ + L L+ +L +L ++G L LQ L ++ N+L ALP +++ +L
Sbjct: 38 TDLTKALQNPLKVRVLNLSFQKLSTLPKEIGELQNLQTLNLDSNELTALPKEMRQLQKLQ 97
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L N++T+L + L LQ + NQ+T V +E L NL ++ L NQ+T +
Sbjct: 98 KLDLRENQLTTLPKEIGQLKSLQTLYLLANQLT-VLPNEIGQLQNLQTLYLSQNQLTILP 156
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L L L L+ NQLT L +I L+ L+ +DL +NK+
Sbjct: 157 KEIAKLQNLQTLNLNGNQLTT-LPSEIGQLQNLQRLDLFHNKL 198
>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
Length = 344
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
AL L L N +T + + T +RKL + N LTS+ + LT L L L +N+L S
Sbjct: 99 ALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTS 158
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ L + N+L ++P++I L + L L+ + N++TS+ + LT LQ
Sbjct: 159 VPAEIGQLASLTESGLSGNRLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQEL 218
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+D N++T V + Q L +L +SL++N++TS+ + + LT L LYL NQLT
Sbjct: 219 WLDDNELTSVPEETGQ-LASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLT 272
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R+L+V N LT L + LT L L L N+L S+ ++G L+ L++L + NQL +
Sbjct: 30 ALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLRVLDLSDNQLTS 89
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L + L LY N++TS+ + LT L+ +D N++T V E L +L+
Sbjct: 90 LPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVPA-EIGQLTSLEV 148
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L +NQ+TS+ + + L L LS N+L
Sbjct: 149 LGLTDNQLTSVPAEIGQLASLTESGLSGNRLA 180
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTS+ + LT L L+L++N L S+ + G L+ L +L + N+L +
Sbjct: 191 SLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLSLRDNELTS 250
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P+++ + L SLY N++TS+ + LT L +D N++T V E L +L+
Sbjct: 251 VPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPA-EIGQLRSLEK 309
Query: 181 ISLQNNQITSMNSSL 195
+ L +N++TS+ + +
Sbjct: 310 LYLDDNKLTSVPAEI 324
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L S+ + L L LFL+ N+L S+ ++G L+ LQ L ++ N+L ++P + +
Sbjct: 177 NRLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLA 236
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L +N +TS+ + LT L+ + NQ+T V E L L + L +N++T
Sbjct: 237 SLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPA-EIGQLTLLTELFLDDNELT 295
Query: 190 SMNSSLSGLTKLAYLYLSHNQLT 212
S+ + + L L LYL N+LT
Sbjct: 296 SVPAEIGQLRSLEKLYLDDNKLT 318
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
+L L L+ L L ++ N L L ++G L+ L L + +NQL ++P++I + L
Sbjct: 19 AALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLR 78
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L ++N++TSL + LT LQ + NQ+T V + +Q L +L + L +N++TS+
Sbjct: 79 VLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQ-LTSLRKLLLDDNELTSVP 137
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + LT L L L+ NQLT +I L L LS N++
Sbjct: 138 AEIGQLTSLEVLGLTDNQLTSV-PAEIGQLASLTESGLSGNRL 179
>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 379
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 8/185 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I ++L++GFN LT+L + L +L L L +N L +L ++G LSKLQ
Sbjct: 177 TFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQK 236
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL LP +I +L LY NN + +L + L KLQ ++ NQIT +
Sbjct: 237 LYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPK- 295
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL ++L NQ+T++ + L L L L NQL L ++ L++LR ++L
Sbjct: 296 EIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLAT-LPKEVGQLQKLRKLNL 354
Query: 231 SYNKI 235
N I
Sbjct: 355 YNNPI 359
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P R L++ + L +L+ + L +L L+LN N+L +L ++G L L
Sbjct: 39 NLTEALQN--PKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q+L + N+L LP +I L L NR+T L + L LQV N+D N++T++
Sbjct: 97 QVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL- 155
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
++ L NL ++ Q NQ+T+ + L KL L L N+LT L +++ L+ L+ +
Sbjct: 156 PEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTT-LREEVVQLQNLQIL 214
Query: 229 DLSYNKI 235
DL N +
Sbjct: 215 DLISNPL 221
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++GFN LT L + + L +L L L+ N+L L ++G L LQ+L + NQL
Sbjct: 119 LQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTF 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L NR+T+L + L LQ+ ++ N +T + + E L L +
Sbjct: 179 PKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPK-EIGQLSKLQKL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQ+T++ + L KL LYL +N L L +I L++L+T+ L N+I F
Sbjct: 238 YLYGNQLTTLPEEIGQLKKLQELYLGNNPL-RTLPKEIEQLQKLQTLYLEGNQITTF 293
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 27/168 (16%)
Query: 26 SHPLTS--DDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGL 82
S+PLT+ ++ L L L N +T + E +++L++G N L +L + L
Sbjct: 218 SNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQL 277
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L L+L N++ + ++G L LQ L + NQL LP +I G
Sbjct: 278 QKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEI------GQ--------- 322
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L LQ N++FNQ+ + ++ Q L L ++L NN I S
Sbjct: 323 --------LQNLQELNLEFNQLATLPKEVGQ-LQKLRKLNLYNNPIAS 361
>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 671
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 49 NITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
+++H A P I R+LH+ N L +L + L +L L L++N+L++L ++
Sbjct: 373 DLSHNQLQALPKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEI 432
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ+L + NQLEALP +I L L N++ +L + L LQ N+ +N
Sbjct: 433 GQLQNLQILDLRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYN 492
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+ + + E L NL ++LQ NQ+ ++ + L L L L +NQL + L +I L
Sbjct: 493 QLKTLPK-EIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQL-KTLPKEIGKL 550
Query: 223 KRLRTVDLSYNKI 235
+ L+ ++L YNK+
Sbjct: 551 QNLQELNLRYNKL 563
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R LH+ N L +L + L +L L+L++N+L++L +G L LQ+L + +NQL+ L
Sbjct: 116 LRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNQLKTL 175
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY ++N++ +L + L LQ+ ++ N++ + + E L NL +
Sbjct: 176 PEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPK-EIGKLRNLPKL 234
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+ ++ + L L L L +NQL E L ++I L+ LR + L NK+
Sbjct: 235 DLSHNQLETLPEEIGQLQNLQILDLRYNQL-ETLPEEIGQLQNLRELHLYNNKL 287
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Query: 57 AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
A P + L + N L +L + L +L L L++N+L++L +G L L+ L + N
Sbjct: 42 ANPSKVFVLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDN 101
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+LEALP DI L +L+ NN++ +L + L LQ + N++ + D NL
Sbjct: 102 KLEALPEDIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPED-IGNLK 160
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL + L NQ+ ++ + L L LYLS N+L E L +DI LK L+ +DLS NK+
Sbjct: 161 NLQILDLSRNQLKTLPEEIGKLQNLQELYLSDNKL-EALPEDIGNLKNLQILDLSRNKL 218
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L +L + L +L L L++N+L++L ++G L LQ+L + NQLE LP +
Sbjct: 211 LDLSRNKLEALPKEIGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEE 270
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L+ NN++ +L + L L+ N+ N++ + +E NL NL +++LQ
Sbjct: 271 IGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEAL-PEEIGNLKNLRTLNLQ 329
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N + ++ + L L L LSHN+L E L +I L+ L +DLS+N++
Sbjct: 330 YNPLKTLPEEIGKLQNLPELDLSHNKL-EALPKEIGQLQNLPKLDLSHNQL 379
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
A P I KL + +N L +L + L +L L L N+LK+L ++G L LQ
Sbjct: 450 ALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQK 509
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L ++ NQL+ LP DI L L NN++ +L + L LQ N+ +N++ + +
Sbjct: 510 LNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPK- 568
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L +NQ+ ++ + L L LYLS NQL + L +I L+ L+ +DL
Sbjct: 569 EIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQL-QALPKEIGKLQNLQGLDL 627
Query: 231 SYNKI 235
N +
Sbjct: 628 GNNPL 632
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ +N L +L + L +L L L++N+L++L ++G L L L + NQL+AL
Sbjct: 323 LRTLNLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQAL 382
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ NN++ +L + L LQ+ ++ N++ + + E L NL +
Sbjct: 383 PKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPK-EIGQLQNLQIL 441
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ NQ+ ++ + L L L L +N+L E L +I LK L+ ++L YN++
Sbjct: 442 DLRYNQLEALPKEIGKLQNLQELNLRYNKL-EALPKEIGKLKNLQKLNLQYNQL 494
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+LH+ N L +L + L +L L L+ N+L++L ++G L L+ L ++ N L+ L
Sbjct: 277 LRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTL 336
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L ++N++ +L + L L ++ NQ+ + + E L NL +
Sbjct: 337 PEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPK-EIGQLQNLREL 395
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+ ++ + L L L LSHN+L E L +I L+ L+ +DL YN++
Sbjct: 396 HLYNNQLETLPEEIGKLQNLQILDLSHNKL-EALPKEIGQLQNLQILDLRYNQL 448
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 23/194 (11%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + N L +L + L +L L L N+L++L ++G L L+ L + N+L+ALP
Sbjct: 233 KLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKLKALPK 292
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L +L + N++ +L + L L+ N+ +N + + +E L NL + L
Sbjct: 293 EIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTL-PEEIGKLQNLPELDL 351
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLT----------------------EFLLDDIRG 221
+N++ ++ + L L L LSHNQL E L ++I
Sbjct: 352 SHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNLRELHLYNNQLETLPEEIGK 411
Query: 222 LKRLRTVDLSYNKI 235
L+ L+ +DLS+NK+
Sbjct: 412 LQNLQILDLSHNKL 425
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L + N L +L + L +L L L N+L++L ++G L L++L + NQL+AL
Sbjct: 530 LRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQAL 589
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L LY + N++ +L + L LQ ++ N + + +D L +L ++
Sbjct: 590 PKEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKD-IGKLKSLQTL 648
Query: 182 SLQNNQITSMNSSLSGLTKLA 202
L N Q+ S+ + L +L
Sbjct: 649 CLDNKQLESLPIEIGKLGELC 669
>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 402
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L L+L NN+L +L ++G L KLQ L + +NQL L
Sbjct: 27 LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 86
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P +I L SL + N+I ++ + L KLQ +D NQ+T + ++ + QNL +LD
Sbjct: 87 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLD 146
Query: 180 --------------------SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
S+ L N++T++ + L L LYL NQLT L ++I
Sbjct: 147 LSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLT-ILPNEI 205
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T++L N++
Sbjct: 206 GQLKNLQTLNLRNNRL 221
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT L + L +L L L+ N++K++ ++ L KLQ L + NQL L
Sbjct: 4 LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 63
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY N++T+L + L L+ N+ +NQI + + E + L L S+
Sbjct: 64 PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPK-EIEKLQKLQSL 122
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L L L LS N+LT L +I L+ L+++DLS N++
Sbjct: 123 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT-TLPQEIGQLQNLQSLDLSTNRL 175
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L + L +L L L+ NRL +L ++G L LQ L + NQL L
Sbjct: 142 LQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTIL 201
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L +L NNR+T+L + L L+ ++ NQ+T+ + E L NL +
Sbjct: 202 PNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPK-EIGQLKNLQVL 260
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L L L NQLT L +I+ LK L+ +DLSYN++
Sbjct: 261 DLGSNQLTTLPEGIGQLKNLQTLDLDSNQLT-TLPQEIKQLKNLQLLDLSYNQL 313
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
+ +L L LN N+L L ++G L L+ L + NQ++ +P +I+ +L SLY NN++
Sbjct: 1 MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 60
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T+L + L KLQ + NQ+T + + E L NL S++L NQI ++ + L KL
Sbjct: 61 TTLPQEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKL 119
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L +NQLT L +I L+ L+++DLS N++
Sbjct: 120 QSLGLDNNQLT-TLPQEIGQLQNLQSLDLSTNRL 152
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L +N+L ++G L LQ+L + NQL L
Sbjct: 211 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L +L ++N++T+L ++ L LQ+ ++ +NQ+ + + E + L NL ++
Sbjct: 271 PEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPK-EIEQLKNLQTL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T + + L L L+L++NQLT L +I LK L+ + L+ N++
Sbjct: 330 YLGYNQLTVLPKEIGQLQNLKVLFLNNNQLT-TLPKEIGQLKNLQELYLNNNQL 382
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L ++ L +L L L+ N+LK+L ++ L LQ L + NQL L
Sbjct: 280 LQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLTVL 339
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L+ NNN++T+L + L LQ ++ NQ+++ ++ + L
Sbjct: 340 PKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIRKL 393
>gi|328704320|ref|XP_001945776.2| PREDICTED: leucine-rich repeat-containing protein 15-like
[Acyrthosiphon pisum]
Length = 520
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 118/230 (51%), Gaps = 27/230 (11%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNR 94
P L L L N I +I AF ++++L + +NN+ L+ +GLT LN L+L+NN
Sbjct: 257 PKLQILFLHRNEIENIETGAFNNLTSLKELQLDYNNIHKLDLEMFKGLTKLNRLYLSNNN 316
Query: 95 LKSLE-GQLGTLSKLQLLV----IEQNQLEALPS--------------DIQLF---SQLG 132
+ L+ G L KLQ+L IE L S D+++F ++L
Sbjct: 317 ISELKNGVFSNLPKLQILNEIENIETGAFNNLTSLKELQLDYNNIHKLDLEMFKGLTKLN 376
Query: 133 SLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY +NN I+ L +G+ L KLQ+ + N+I + F NL +LDS+SL +N I +
Sbjct: 377 RLYLSNNNISELKNGVFSNLPKLQILFLHSNKIDNIEIGIFNNLTSLDSLSLHDNNIHKL 436
Query: 192 NSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+S + GLTKL LYLS+N ++E L +L+ + L NKI T
Sbjct: 437 DSEMFKGLTKLNRLYLSNNNISELKNGAFANLSQLQALFLHRNKIENIET 486
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 125/265 (47%), Gaps = 59/265 (22%)
Query: 27 HPLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHV-----------GFNNLT 73
H + S+ KG L L+L NNNI+ + F P ++ L + FNNLT
Sbjct: 150 HKIDSEMFKGLTKLNRLILSNNNISEMKNGVFSNLPKLQILFLHRNEIENIETGAFNNLT 209
Query: 74 SL-------NN-------SLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQL 118
SL NN +GLT LN L+L+NN + L+ G L KLQ+L + +N++
Sbjct: 210 SLKELQLDYNNIHKLDLEMFKGLTKLNRLYLSNNNISELKNGVFSNLPKLQILFLHRNEI 269
Query: 119 EALPS----------------------DIQLF---SQLGSLYANNNRITSL-DGLLRGLT 152
E + + D+++F ++L LY +NN I+ L +G+ L
Sbjct: 270 ENIETGAFNNLTSLKELQLDYNNIHKLDLEMFKGLTKLNRLYLSNNNISELKNGVFSNLP 329
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQL 211
KLQ+ N+I + F NL +L + L N I ++ + GLTKL LYLS+N +
Sbjct: 330 KLQI----LNEIENIETGAFNNLTSLKELQLDYNNIHKLDLEMFKGLTKLNRLYLSNNNI 385
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKIN 236
+E L +L+ + L NKI+
Sbjct: 386 SELKNGVFSNLPKLQILFLHSNKID 410
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 51/249 (20%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLK 96
L TL L N I +I AF +++ LH+ +NN+ +++ + +GLT LN L L+NN +
Sbjct: 115 LQTLFLSVNKIDNIDIGAFNNLTSLKVLHLDYNNIHKIDSEMFKGLTKLNRLILSNNNIS 174
Query: 97 SLE-GQLGTLSKLQLLVIEQNQLEALPS----------------------DIQLF---SQ 130
++ G L KLQ+L + +N++E + + D+++F ++
Sbjct: 175 EMKNGVFSNLPKLQILFLHRNEIENIETGAFNNLTSLKELQLDYNNIHKLDLEMFKGLTK 234
Query: 131 LGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY +NN I+ L +G+ L KLQ+ + N+I + F NL +L + L N I
Sbjct: 235 LNRLYLSNNNISELKNGVFSNLPKLQILFLHRNEIENIETGAFNNLTSLKELQLDYNNIH 294
Query: 190 SMNSSL-SGLTKLAYLYLSHNQLTEF------------LLDDIRGLK--------RLRTV 228
++ + GLTKL LYLS+N ++E +L++I ++ L+ +
Sbjct: 295 KLDLEMFKGLTKLNRLYLSNNNISELKNGVFSNLPKLQILNEIENIETGAFNNLTSLKEL 354
Query: 229 DLSYNKINK 237
L YN I+K
Sbjct: 355 QLDYNNIHK 363
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 70 NNLTSLNN-SLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-Q 126
NN++ + N + L+ L LFL+ N++ +++ G L+ L++L ++ N + + S++ +
Sbjct: 99 NNISEVKNGAFANLSKLQTLFLSVNKIDNIDIGAFNNLTSLKVLHLDYNNIHKIDSEMFK 158
Query: 127 LFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
++L L +NN I+ + +G+ L KLQ+ + N+I + F NL +L + L
Sbjct: 159 GLTKLNRLILSNNNISEMKNGVFSNLPKLQILFLHRNEIENIETGAFNNLTSLKELQLDY 218
Query: 186 NQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
N I ++ + GLTKL LYLS+N ++E L +L+ + L N+I T
Sbjct: 219 NNIHKLDLEMFKGLTKLNRLYLSNNNISELKNGVFSNLPKLQILFLHRNEIENIET 274
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
PP ++L + +N + + + L NNN + G LSKLQ L + N++
Sbjct: 66 PPATKELDLSYNEIRDIESLTHLTELETLLLSNNNISEVKNGAFANLSKLQTLFLSVNKI 125
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ + DI G LT L+V ++D+N I + + F+ L L
Sbjct: 126 DNI--DI--------------------GAFNNLTSLKVLHLDYNNIHKIDSEMFKGLTKL 163
Query: 179 DSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ + L NN I+ M N S L KL L+L N++ L L+ + L YN I+K
Sbjct: 164 NRLILSNNNISEMKNGVFSNLPKLQILFLHRNEIENIETGAFNNLTSLKELQLDYNNIHK 223
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 50/216 (23%)
Query: 27 HPLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHV-------GFNNLTSL-- 75
H L + KG L L L NNNI+ + F P ++ L+ FNNLTSL
Sbjct: 294 HKLDLEMFKGLTKLNRLYLSNNNISELKNGVFSNLPKLQILNEIENIETGAFNNLTSLKE 353
Query: 76 -----NN-------SLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLE--- 119
NN +GLT LN L+L+NN + L+ G L KLQ+L + N+++
Sbjct: 354 LQLDYNNIHKLDLEMFKGLTKLNRLYLSNNNISELKNGVFSNLPKLQILFLHSNKIDNIE 413
Query: 120 --------ALPS-----------DIQLF---SQLGSLYANNNRITSL-DGLLRGLTKLQV 156
+L S D ++F ++L LY +NN I+ L +G L++LQ
Sbjct: 414 IGIFNNLTSLDSLSLHDNNIHKLDSEMFKGLTKLNRLYLSNNNISELKNGAFANLSQLQA 473
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
+ N+I + F NL +L + L N I ++
Sbjct: 474 LFLHRNKIENIETGAFNNLMSLKELQLDYNNIHKLD 509
>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
MOR084]
gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
MOR084]
Length = 326
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L L++NRL +L ++G L KLQ L + QNQL+ LP +I+ +L +L+ NN +T+L
Sbjct: 1 LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE 60
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ L LQ N++ NQ T + +E NL L +SL ++++T++ + L L L L+
Sbjct: 61 IGNLQNLQELNLNSNQFTTL-PEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLN 119
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ T L ++I L++L+T+DL+Y+++
Sbjct: 120 SNQFT-TLPEEIGNLQKLQTLDLNYSRL 146
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ LH+G N LT+L + L +L L LN+N+ +L ++G L KLQ L + ++L L
Sbjct: 44 LEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTL 103
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I L L N+N+ T+L + L KLQ +++++++T + ++
Sbjct: 104 PKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLN 163
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL ++SL N++T++ + L L L L NQLT L + I
Sbjct: 164 LYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLT-TLPEKI 222
Query: 220 RGLKRLRTVDLSYNKI 235
L++L+ + L+ N++
Sbjct: 223 GNLQKLQELSLAGNRL 238
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N LT+L + L L L L N+LK+L ++ L KL+ L + N+L LP +
Sbjct: 1 LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE 60
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L N+N+ T+L + L KLQ ++ +++T + + E NL NL ++L
Sbjct: 61 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPK-EIGNLQNLQELNLN 119
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+NQ T++ + L KL L L++++LT L +I L++L+ ++L N++
Sbjct: 120 SNQFTTLPEEIGNLQKLQTLDLNYSRLT-TLPKEIGKLQKLQKLNLYKNQL 169
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L +L + L L L L NN L +L ++G L LQ L + NQ L
Sbjct: 21 LQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTL 80
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L ++R+T+L + L LQ N++ NQ T + +E NL L ++
Sbjct: 81 PEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTL-PEEIGNLQKLQTL 139
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +++T++ + L KL L L NQL + L +I L+ L+ + L+ N++
Sbjct: 140 DLNYSRLTTLPKEIGKLQKLQKLNLYKNQL-KTLPKEIGKLQNLKNLSLNGNEL 192
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N T+L + L L L LN +RL +L ++G L KLQ L + +NQL+ L
Sbjct: 113 LQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTL 172
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N N +T+L + L LQ ++ NQ+T + ++ NL L +
Sbjct: 173 PKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLP-EKIGNLQKLQEL 231
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
SL N++ ++ + G + +N L +I L+ L +++LS N + F
Sbjct: 232 SLAGNRLKTLPKEI-GNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISF 287
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N L +L + L +L L LN N L +L ++G L LQ L + NQL L
Sbjct: 159 LQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTL 218
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I +L L NR+ +L + G + N E +NL +L+S+
Sbjct: 219 PEKIGNLQKLQELSLAGNRLKTLPKEI-GNLQNLQELNLNNNQLTTLPKEIENLQSLESL 277
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+L N + S + L KL +LYL N
Sbjct: 278 NLSGNSLISFPEEIGKLQKLKWLYLGGN 305
>gi|301610186|ref|XP_002934640.1| PREDICTED: leucine-rich repeat and death domain-containing protein
LOC401387 homolog [Xenopus (Silurana) tropicalis]
Length = 813
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 3/201 (1%)
Query: 36 GTPALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
GT ++ ++ L + +T I + F T ++ L + N +T L SL L+ L L L N
Sbjct: 93 GTGSITSINLNSKELTEIPPDVFRCTNLQCLLLSNNFMTHLPTSLCHLSKLEILSLEGNA 152
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
L SL ++ +LS+L L + NQ+ LP +I + L+ANNN+++ L L LT L
Sbjct: 153 LVSLPPEICSLSQLTALNVNHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPCLGDLTTL 212
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
QV + N + + D +L NL ++L NQI+++ ++ L++L L LS NQ+
Sbjct: 213 QVLCISGNSMKTL-PDSTASLKNLHVLNLDGNQISALPKAVFRLSQLVKLCLSGNQIKS- 270
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
L +I LK LR + LS N++
Sbjct: 271 LPKEIGDLKNLRELSLSSNQL 291
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ PP I L+V N + L + + GL ++ LF NNN+L L LG L+ LQ+
Sbjct: 155 SLPPEICSLSQLTALNVNHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPCLGDLTTLQV 214
Query: 111 LVI-----------------------EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L I + NQ+ ALP + SQL L + N+I SL
Sbjct: 215 LCISGNSMKTLPDSTASLKNLHVLNLDGNQISALPKAVFRLSQLVKLCLSGNQIKSLPKE 274
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ L L+ ++ NQ+T + + NL +L+ ++L +N++T+++ L L +L L ++
Sbjct: 275 IGDLKNLRELSLSSNQLTFLPV-QLYNLTSLEELTLDDNKLTAISDKLQNLKQLKVLSIA 333
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+N LT+ + + + + + L+ N++ + T+
Sbjct: 334 NNLLTD-ITEKVCWCPAIECLKLNGNQMYRLPTK 366
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LT++++ L+ L L L + NN L + ++ ++ L + NQ+
Sbjct: 303 SLEELTLDDNKLTAISDKLQNLKQLKVLSIANNLLTDITEKVCWCPAIECLKLNGNQMYR 362
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ I L L+ N + L L L L V N + + E +N + +
Sbjct: 363 LPTKIHNLRNLKELHIERNALEMLPDQLAHLNNLSVIVCANNNLLWI-PIELKNCNQITK 421
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ L N+++ + +LS +T L YL L+ N++ E + + I ++L ++LS NK+ F
Sbjct: 422 LDLSGNKLSEVPQALSSMTSLLYLNLNQNEIHE-IANSIIHNRKLEHLELSGNKLTVFSV 480
Query: 241 RNEG 244
G
Sbjct: 481 HFCG 484
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L SL + L L +L L +++N +K+L G +G + L L NQL LP+ I + L
Sbjct: 593 LISLPDELSKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTATSNQLYHLPASISSLAAL 652
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
L N++TSL + GL KL+ N+D N +
Sbjct: 653 QQLSLKGNQLTSLPSDISGLQKLREINLDSNPM 685
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN---Q 117
+++K+ + N + ++ + + L L ++ L+NN K +L ++S L+ L I Q +
Sbjct: 533 SLQKIDLSGNQIETVPSGISLLEGLRYVNLSNNSFKVFPRELFSVSSLETLKISQKDGRK 592
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L +LP ++ L L ++N I +L G + + L NQ+ + +L
Sbjct: 593 LISLPDELSKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTATSNQLYHLPAS-ISSLAA 651
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL--TEFLLDDIRGL----KRLRTVDLS 231
L +SL+ NQ+TS+ S +SGL KL + L N + LL D + L + L++ DL
Sbjct: 652 LQQLSLKGNQLTSLPSDISGLQKLREINLDSNPMLRPPSLLCDGKRLYPIGRYLQSADLR 711
Query: 232 YNKI 235
KI
Sbjct: 712 DEKI 715
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 100/250 (40%), Gaps = 55/250 (22%)
Query: 39 ALITLLLVNNNITHIHENA----FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
++ +LL +N N IHE A + L + N LT + GL +L +L L+ N
Sbjct: 438 SMTSLLYLNLNQNEIHEIANSIIHNRKLEHLELSGNKLTVFSVHFCGLHNLAYLDLSRNE 497
Query: 95 LKSLEG-----------------------QLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
+ S+ +L L LQ + + NQ+E +PS I L L
Sbjct: 498 INSVPSAISNLESLSELLLHSNKFRRFPIELCALKSLQKIDLSGNQIETVPSGISLLEGL 557
Query: 132 GSLYANNN--------------------------RITSLDGLLRGLTKLQVFNMDFNQIT 165
+ +NN ++ SL L L L+ + N I
Sbjct: 558 RYVNLSNNSFKVFPRELFSVSSLETLKISQKDGRKLISLPDELSKLKNLKELEISDNNIK 617
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ + NL ++ +NQ+ + +S+S L L L L NQLT L DI GL++L
Sbjct: 618 TL-PGSIGEMKNLVQLTATSNQLYHLPASISSLAALQQLSLKGNQLTS-LPSDISGLQKL 675
Query: 226 RTVDLSYNKI 235
R ++L N +
Sbjct: 676 REINLDSNPM 685
>gi|418701701|ref|ZP_13262623.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759265|gb|EKR25480.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 310
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P +R L++ LT+L + L +L L L NN++ L ++G L L
Sbjct: 39 NLTEALQN--PLDVRVLNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
QLL + NQL LP +I+ L +LY NN+IT L +R L L+V + NQ+T +
Sbjct: 97 QLLGLYYNQLTILPKEIEQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLP 156
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+ E + L NL ++ L NN++T+ + L L LYL NQLT L +I+ LK L+ +
Sbjct: 157 K-EIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLT-VLPQEIKQLKNLQLL 214
Query: 229 DLSYNKI 235
DLSYN++
Sbjct: 215 DLSYNQL 221
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N +T L +R L +L LFL+NN+L +L ++ L LQ L + N+L
Sbjct: 119 LQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQTLYLGNNRLTTF 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L LY +N++T L ++ L LQ+ ++ +NQ+ + + E + L NL ++
Sbjct: 179 PKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPK-EIEQLKNLQTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T + + L L L+L++NQLT L +I LK L+ + L+ N++
Sbjct: 238 YLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTT-LPKEIGQLKNLQELYLNNNQL 290
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 42 TLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
TL L NN +T FP I +L ++ N LT L ++ L +L L L+ N+L
Sbjct: 167 TLYLGNNRLT-----TFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQL 221
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
K+L ++ L LQ L + NQL LP +I L L+ NNN++T+L + L LQ
Sbjct: 222 KTLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQ 281
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
++ NQ+++ ++ Q L IS +
Sbjct: 282 ELYLNNNQLSIEEKERIQKLIPKCQISFE 310
>gi|357408264|ref|YP_004920187.1| hypothetical protein SCAT_p0896 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386352737|ref|YP_006050984.1| hypothetical protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337763213|emb|CCB71921.1| Leucine Rich Repeat (LRR)-containing protein [Streptomyces cattleya
NRRL 8057 = DSM 46488]
gi|365810816|gb|AEW99031.1| hypothetical protein SCATT_p08380 [Streptomyces cattleya NRRL 8057
= DSM 46488]
Length = 320
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 6/228 (2%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
AL IDL+ H ++ PAL TL L N +TH+ + P +R L +G N
Sbjct: 35 TALRRIDLDGNALPH--LPAEVAALPALATLSLYANQLTHVPDALGDAPALRHLSLGGNR 92
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT + +SL LT L L L N L +L +LG L+ L++L + N+L +P + L
Sbjct: 93 LTRVPDSLCRLTTLRSLNLAENLLTALPPRLGDLTDLRMLDLGHNRLHHIPDALGDLPNL 152
Query: 132 GS-LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
LY ++N TS+ L LT L N+ N +T + D ++ L + L +N + +
Sbjct: 153 TDYLYLSDNGFTSVPASLGRLTGLDYLNLTHNHLTTL-PDTLGDMAALRELRLYDNHLAT 211
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ S+L LT+L L+L+ N LT L + L LR +DL N +
Sbjct: 212 LPSTLGRLTRLRELHLADNHLT-VLPHTLGDLHDLRHLDLRNNPLRHL 258
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 77/183 (42%), Gaps = 25/183 (13%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT L +T L + L+ N L L ++ L L L + NQL +P + L
Sbjct: 24 LTRWPTGLARMTALRRIDLDGNALPHLPAEVAALPALATLSLYANQLTHVPDALGDAPAL 83
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------R 169
L NR+T + L LT L+ N+ N +T +
Sbjct: 84 RHLSLGGNRLTRVPDSLCRLTTLRSLNLAENLLTALPPRLGDLTDLRMLDLGHNRLHHIP 143
Query: 170 DEFQNLHNL-DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--LLDDIRGLKRLR 226
D +L NL D + L +N TS+ +SL LT L YL L+HN LT L D+ L+ LR
Sbjct: 144 DALGDLPNLTDYLYLSDNGFTSVPASLGRLTGLDYLNLTHNHLTTLPDTLGDMAALRELR 203
Query: 227 TVD 229
D
Sbjct: 204 LYD 206
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+LH+ N+LT L ++L L DL L L NN L+ L LGTL +L+ L + L L
Sbjct: 222 LRELHLADNHLTVLPHTLGDLHDLRHLDLRNNPLRHLPDTLGTLHRLRHLDLRATHLRHL 281
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGL 147
P + + L SL + R T LD L
Sbjct: 282 PDTL---ATLPSLEKLDLRWTKLDQL 304
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N+LT+L ++L + L L L +N L +L LG L++L+ L + N L LP
Sbjct: 179 LNLTHNHLTTLPDTLGDMAALRELRLYDNHLATLPSTLGRLTRLRELHLADNHLTVLPHT 238
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
+ L L NN + L L L +L+ ++ + + D L +L+ + L+
Sbjct: 239 LGDLHDLRHLDLRNNPLRHLPDTLGTLHRLRHLDLRATHLRHL-PDTLATLPSLEKLDLR 297
Query: 185 NNQITSMNSSLSGLTKLAYLYL 206
++ + + L + + L
Sbjct: 298 WTKLDQLPPWIQALRQRGCVVL 319
>gi|255070543|ref|XP_002507353.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
gi|226522628|gb|ACO68611.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
Length = 426
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 27/227 (11%)
Query: 9 DGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHV 67
+G V L L D+ TG+ P +L AL L L N +T + E ++ KL++
Sbjct: 188 NGRVVELELEDVG-LTGAVPA---ELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYL 243
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N LTS+ + LT L L+L +N+L SL ++G L+ L++L++ NQL ++P++I
Sbjct: 244 HDNRLTSVPAEIGQLTSLEGLWLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAEIGQ 303
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------------- 170
+ L L+ +N++TS+ + LT L+ + NQ+T V +
Sbjct: 304 LTSLTELHLADNQLTSVPAEIGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRL 363
Query: 171 -----EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
E L L ++L+ NQ+TS+ + + LT L LYL HNQLT
Sbjct: 364 TSVPAEIGQLTELKELNLEGNQLTSVPAEIGQLTSLERLYLGHNQLT 410
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
AL LLL N +T + E ++ +LH+ N LTS+ + LT L L L +N+L S
Sbjct: 283 ALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAEIGQLTSLERLGLRDNQLTS 342
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ L+ L + N+L ++P++I ++L L N++TS+ + LT L+
Sbjct: 343 VPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAEIGQLTSLERL 402
Query: 158 NMDFNQITMV 167
+ NQ+T V
Sbjct: 403 YLGHNQLTSV 412
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L L +N +T + E ++ +L + N LTS+ + LT L L+L NRL S
Sbjct: 306 SLTELHLADNQLTSVPAEIGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTS 365
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
+ ++G L++L+ L +E NQL ++P++I + L LY +N++TS+ ++R
Sbjct: 366 VPAEIGQLTELKELNLEGNQLTSVPAEIGQLTSLERLYLGHNQLTSVPAVIR 417
>gi|421110784|ref|ZP_15571275.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803881|gb|EKS10008.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 371
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + FN +T L + L L L L N L +L ++G L LQ L + +NQL L
Sbjct: 62 LQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKEIGKLQSLQRLTLWENQLTTL 121
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N++T++ L LQ ++ FNQ+T + + E + L NL +
Sbjct: 122 PKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPK-EIEQLQNLQEM 180
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NNQ+ ++ + L L LYLS N++T L +I L+ L+ + LS NKI
Sbjct: 181 DSNNNQLKTLPKEIGNLQHLQKLYLSSNKIT-ILPKEIGNLQHLQKLYLSSNKI 233
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 3/201 (1%)
Query: 39 ALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L+L N +T I + + +++L + FN LT++ + L +L + NNN+LK+
Sbjct: 130 SLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKT 189
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L ++G L LQ L + N++ LP +I L LY ++N+IT L + L KL+
Sbjct: 190 LPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYL 249
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ NQ+T + + E L NL + L +N + ++ + L L L L N+LT L
Sbjct: 250 YLEVNQLTTLPK-EIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNKLTT-LPK 307
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L+ L ++DLS N + F
Sbjct: 308 EIENLQSLESLDLSNNPLTSF 328
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L + N LT+L + L L L L N+L ++ + L LQ L + NQL A
Sbjct: 107 SLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTA 166
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P +I+ L + +NNN++ +L + L LQ + N+IT++ + E NL +L
Sbjct: 167 IPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPK-EIGNLQHLQK 225
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L +N+IT + + L KL YLYL NQLT L +I L+ L+ + L +N
Sbjct: 226 LYLSSNKITILPKEIGNLQKLEYLYLEVNQLTT-LPKEIGQLRNLKVLYLDHN 277
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N +T L + L L L+L++N++ L ++G L KL+ L +E NQL L
Sbjct: 200 LQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTL 259
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY ++N + ++ + L LQ ++D N++T + + E +NL +L+S+
Sbjct: 260 PKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNKLTTLPK-EIENLQSLESL 318
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLS 207
L NN +TS + L L +L L
Sbjct: 319 DLSNNPLTSFPEEIGKLQHLKWLRLE 344
>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
Length = 400
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 108/195 (55%), Gaps = 2/195 (1%)
Query: 41 ITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG 100
+ +L ++NN T E + KL++ N L +L + L L L LNNN+L ++
Sbjct: 44 VRILSLHNNETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPN 103
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
++G L KLQ+L ++ NQL+ALP +I +L LY N+N++ +L + L KL+ +
Sbjct: 104 EIGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDST 163
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N +T + + E L NL+ + L NN++T++ + L L LYL + LT L +DI
Sbjct: 164 NNPLTTLPK-EIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLT-TLPNDIG 221
Query: 221 GLKRLRTVDLSYNKI 235
LK L+ + L+ ++
Sbjct: 222 YLKNLQKLYLNTGRL 236
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 99/191 (51%), Gaps = 15/191 (7%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L+L NN +T + E ++ L++G + LT+L N + L +L L+LN RL +L
Sbjct: 183 LILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPND 242
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ L + NQL+ LP+DI L L+ + N++T+L L L+ N+
Sbjct: 243 IGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSG 302
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT--------- 212
NQ+T + + EF L +L ++L NQ+T++ + L L L LS NQLT
Sbjct: 303 NQLTTLPK-EFGKLQSLRELNLSGNQLTTLPKEIGKLQSLRELNLSGNQLTTLPKEIGHL 361
Query: 213 ----EFLLDDI 219
E LDDI
Sbjct: 362 KNLQELYLDDI 372
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L N LT+L + L +L L L+NN L +L ++G L LQ+L + + L L
Sbjct: 157 LRELDSTNNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTL 216
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTK--------------------LQVFN 158
P+DI L LY N R+T+L G L+ L + LQV +
Sbjct: 217 PNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLH 276
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T + + EF L +L ++L NQ+T++ L L L LS NQLT L +
Sbjct: 277 LSGNQLTTLPK-EFGKLQSLRELNLSGNQLTTLPKEFGKLQSLRELNLSGNQLT-TLPKE 334
Query: 219 IRGLKRLRTVDLSYNKI 235
I L+ LR ++LS N++
Sbjct: 335 IGKLQSLRELNLSGNQL 351
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 30/186 (16%)
Query: 69 FNNLTSLNNSLRGLTDLNWL---------------------FLNNNRLKSLEGQLGTLSK 107
++NLT +LR TD+ L +L+NN+L++L ++G L K
Sbjct: 31 YHNLTE---ALRNATDVRILSLHNNETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKK 87
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI-TM 166
LQ+L + NQL +P++I +L LY +NN++ +L + L KLQV ++ NQ+ T+
Sbjct: 88 LQVLTLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTL 147
Query: 167 VRRDEF-QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ E+ Q L LDS NN +T++ + L L L LS+N+LT L +I LK L
Sbjct: 148 PKEIEYLQKLRELDST---NNPLTTLPKEIGYLKNLEELILSNNELT-TLPKEIGKLKNL 203
Query: 226 RTVDLS 231
+ + L
Sbjct: 204 QVLYLG 209
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%)
Query: 57 AFPPTI---RKLHVGF---NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
A P I +KL V + N L +L + L L L NN L +L ++G L L+
Sbjct: 123 ALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLKNLEE 182
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L++ N+L LP +I L LY + +T+L + L LQ ++ ++T + D
Sbjct: 183 LILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPND 242
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
L NL + L +NQ+ ++ + + L L L+LS NQLT L + L+ LR ++L
Sbjct: 243 -IGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLT-TLPKEFGKLQSLRELNL 300
Query: 231 SYNKI 235
S N++
Sbjct: 301 SGNQL 305
>gi|260788624|ref|XP_002589349.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
gi|229274526|gb|EEN45360.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
Length = 1364
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 23/197 (11%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+LH N LTSL ++ L L L++N N+L +L + L KL LL I NQL +PS
Sbjct: 62 RLHADGNMLTSLQQAIGSLQKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVPS 121
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I L L L +NN++T+ + + L KL+ ++ NQ+T V +L NL+ + +
Sbjct: 122 GIYLLPNLEFLVVSNNKLTAFNPGVEKLKKLRKLFINGNQLTEVPAG-VCSLPNLELLDV 180
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEF----------------------LLDDIRG 221
NN++++ + L KL LY++ NQLTE L DD+
Sbjct: 181 DNNKLSTFPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQ 240
Query: 222 LKRLRTVDLSYNKINKF 238
L RL+T+ + + ++F
Sbjct: 241 LTRLKTLSVRGCQFDEF 257
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L + N +T + + P + L V N LT+ N + L L LF+N N+L +
Sbjct: 106 LTLLSICGNQLTEVPSGIYLLPNLEFLVVSNNKLTAFNPGVEKLKKLRKLFINGNQLTEV 165
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ +L L+LL ++ N+L P ++ +L LY N+N++T + L L V N
Sbjct: 166 PAGVCSLPNLELLDVDNNKLSTFPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLN 225
Query: 159 MDFNQITMVRR--DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ N I RR D+ L L ++S++ Q + L L LY + + +
Sbjct: 226 VSNNPI---RRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQLKTLVVLYAGGCKF-DIVP 281
Query: 217 DDIRGLKRLRTVDLSYN 233
D++ L+ L+ + L N
Sbjct: 282 DEVGSLQHLQVLALDKN 298
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LTS+ + +TDL L ++NN L S+ +G L KL L + N L +LP I +L
Sbjct: 413 LTSIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHADGNMLTSLPQAIASMLEL 472
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L+ N+N++++ + L KL M+ NQ+ V +L NL+ + +++N +++
Sbjct: 473 THLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPPG-VCSLPNLEVLCVRSNNLSTF 531
Query: 192 NSSLSGLTKLAYLYLSHNQLTEF 214
+ L KL LY+ NQLTE
Sbjct: 532 PPGVEKLQKLRELYIHDNQLTEV 554
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+LH N LTSL ++ + +L LF+N+N+L + + L KL L + NQL +P
Sbjct: 451 RLHADGNMLTSLPQAIASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPP 510
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L L +N +++ + L KL+ + NQ+T V +L NL+ +
Sbjct: 511 GVCSLPNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPG-LCSLSNLEVFIV 569
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
NN+++++ +S L KL + L +N+ F + + L + +D+ N I + T
Sbjct: 570 INNELSTLPPGMSQLLKLREILLGNNKFDTF-PEVLCELPAMEELDIRNNNITRLPT 625
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L L+N L S+ ++ ++ L++L + +N+L ++P I +L L+A+ N +TSL
Sbjct: 17 LDLSNQGLTSIPEEVFDITDLEVLDVSKNKLTSIPEAIGRLRKLSRLHADGNMLTSLQQA 76
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ L KL ++ N++T + + L L +S+ NQ+T + S + L L +L +S
Sbjct: 77 IGSLQKLTHLYVNRNKLTNLPPG-IEKLQKLTLLSICGNQLTEVPSGIYLLPNLEFLVVS 135
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+N+LT F + LK+LR + ++ N++ +
Sbjct: 136 NNKLTAF-NPGVEKLKKLRKLFINGNQLTEV 165
>gi|195150229|ref|XP_002016057.1| GL10699 [Drosophila persimilis]
gi|194109904|gb|EDW31947.1| GL10699 [Drosophila persimilis]
Length = 1280
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV--GFNNLTSLN-NSLRGLTDL 85
++S+ L P L TL L N + I N+FP + R H+ +N + +++ +S L +L
Sbjct: 309 ISSEALAVLPMLKTLDLSRNQLHSIEANSFPKSTRLAHLILNWNEIANVDEHSFAALNNL 368
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L LNNNRL SL G L++L+ L + N LE S + L L +N+I SL
Sbjct: 369 TDLELNNNRLNSLPVGVFKNLNRLKKLALSYNHLEINWSTFRGLLSLQRLQLKSNQIRSL 428
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LA 202
DG+ + ++ +D NQI+ + R NL L +SL NN I+ + T+ L
Sbjct: 429 QDGVFYVMRNIESIELDHNQISSLSRQGLFNLTKLHHLSLSNNSISRIELDTWEFTQSLE 488
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LSHN ++EF + L+RL+ ++L++NK+
Sbjct: 489 SLDLSHNSISEFKPQHLDCLQRLKQLNLAHNKL 521
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 88 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L NN+L ++ LS L + +++N LE +P L + L L NNRI S+
Sbjct: 253 LHLANNKLNDTTVLEIRNLSNLVKVTLKRNLLEVIPKFTGL-TGLKHLILANNRIRSISS 311
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
L L L+ ++ NQ+ + + F L + L N+I +++ S + L L L
Sbjct: 312 EALAVLPMLKTLDLSRNQLHSIEANSFPKSTRLAHLILNWNEIANVDEHSFAALNNLTDL 371
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++N+L + + L RL+ + LSYN +
Sbjct: 372 ELNNNRLNSLPVGVFKNLNRLKKLALSYNHL 402
>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 580
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L +L + L L L L NN+LK+L ++G L KLQ L + N+L LP D
Sbjct: 387 LNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKD 446
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I+ L L NN++ +L + L LQV N+ N++T + +D L NL + L
Sbjct: 447 IEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKD-IGKLQNLQELYLT 505
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
NNQ+T++ + L L LYL++NQLT L +IR LK L + L
Sbjct: 506 NNQLTTLPKDIEKLQNLQELYLTNNQLT-TLPKEIRYLKGLEVLHLD 551
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L +L + L +L L L+NN+LK+L +G L KL++L + NQL+ L
Sbjct: 361 LQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTL 420
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L ++N++T+L + L LQV N+ NQ+ + + E L NL +
Sbjct: 421 PKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQLKTLPK-EIGQLQNLQVL 479
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +N++T++ + L L LYL++NQLT L DI L+ L+ + L+ N++
Sbjct: 480 NLSHNKLTTLPKDIGKLQNLQELYLTNNQLT-TLPKDIEKLQNLQELYLTNNQL 532
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L +L + L L L L++N+LK+L +G L LQ+L + NQL+ LP D
Sbjct: 341 LDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKD 400
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +L L NN++ +L + L KLQ N+ N++T + +D + L NL ++L
Sbjct: 401 IGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKD-IEKLQNLQVLNLT 459
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NNQ+ ++ + L L L LSHN+LT L DI L+ L+ + L+ N++
Sbjct: 460 NNQLKTLPKEIGQLQNLQVLNLSHNKLT-TLPKDIGKLQNLQELYLTNNQL 509
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+G N L +L + L +L L L+ N+LK+L +G L KLQ L ++ NQL+ LP D
Sbjct: 318 LHLGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKD 377
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L +NN++ +L + L KL+V + NQ+ + + E L L ++L
Sbjct: 378 IGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPK-EIGQLQKLQELNLS 436
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N++T++ + L L L L++NQL + L +I L+ L+ ++LS+NK+
Sbjct: 437 HNKLTTLPKDIEKLQNLQVLNLTNNQL-KTLPKEIGQLQNLQVLNLSHNKL 486
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 102/175 (58%), Gaps = 3/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ-LLVIEQNQLEA 120
+++L++ N L +L + L +L L L++N+L +L ++G L KLQ LL + NQL+
Sbjct: 268 LQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKT 327
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP DI +L L + N++ +L + L KLQ +D NQ+ + +D L NL
Sbjct: 328 LPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKD-IGKLQNLQV 386
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NNQ+ ++ + L KL L L +NQL + L +I L++L+ ++LS+NK+
Sbjct: 387 LNLSNNQLKTLPKDIGQLQKLRVLELYNNQL-KTLPKEIGQLQKLQELNLSHNKL 440
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 74 SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS 133
+L +L+ TD+ +L LNNN+L +L +G L LQ L + NQL +P +I +L
Sbjct: 28 NLTEALQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQE 87
Query: 134 LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
L + N++T+L L + +LQ +D NQ+ + + E L NL + L NNQ+ ++
Sbjct: 88 LNLSRNQLTTL-TLPNKIGQLQKLYLDNNQLKTLPK-EIGKLQNLQELYLTNNQLKTLPK 145
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +L L L NQLT L ++I L+ L+ +DLS N++
Sbjct: 146 EIGYLKELQDLDLRDNQLT-TLPNEIGKLQNLQKLDLSGNQL 186
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 43 LLLVNNNI-THIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L NN + T E + ++ L + N LT+L N + L +L L L+ N+LK+L +
Sbjct: 133 LYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKE 192
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L L+ L + NQL+ LP +I +L L +N++T+L + L LQ ++
Sbjct: 193 IGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSG 252
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQ+ + + E L NL + L NQ+ ++ + L +L L+LS N+LT L +I
Sbjct: 253 NQLKTLPK-EIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLT-TLPKEIGQ 310
Query: 222 LKRLRTV 228
L++L+ +
Sbjct: 311 LQKLQAL 317
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 9/189 (4%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P +R L + N LT+L + L +L L L NN+L ++ ++G L +L
Sbjct: 28 NLTEALQN--PTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKEL 85
Query: 109 QLLVIEQNQLE--ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
Q L + +NQL LP+ I QL LY +NN++ +L + L LQ + NQ+
Sbjct: 86 QELNLSRNQLTTLTLPNKI---GQLQKLYLDNNQLKTLPKEIGKLQNLQELYLTNNQLKT 142
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ + E L L + L++NQ+T++ + + L L L LS NQL + L +I L+ LR
Sbjct: 143 LPK-EIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQL-KTLPKEIGKLQNLR 200
Query: 227 TVDLSYNKI 235
+DL+ N++
Sbjct: 201 ELDLNDNQL 209
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N L +L + L +L L+L NN+LK+L ++G L +LQ L + NQL L
Sbjct: 107 LQKLYLDNNQLKTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTL 166
Query: 122 PSDI-----------------QLFSQLGSLY------ANNNRITSLDGLLRGLTKLQVFN 158
P++I L ++G L N+N++ +L + L +LQ +
Sbjct: 167 PNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLD 226
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T + +E L NL + L NQ+ ++ + L L LYL NQL + L +
Sbjct: 227 LRDNQLTTL-PNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQL-KTLPKE 284
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK L+ + LS NK+
Sbjct: 285 IGYLKELQVLHLSDNKL 301
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L L NN+LK+L ++G L LQ+L + N+L L
Sbjct: 430 LQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTL 489
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI L LY NN++T+L + L LQ + NQ+T + + E + L L+ +
Sbjct: 490 PKDIGKLQNLQELYLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLPK-EIRYLKGLEVL 548
Query: 182 SLQNNQITSMNSSLSGLTKL 201
L + I ++ S + KL
Sbjct: 549 HL--DDIPALRSQEKKIRKL 566
>gi|298709834|emb|CBJ31632.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 316
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 29/211 (13%)
Query: 62 IRKLHVGFNNLT-SLNNSLRGLTDLNWLFLNNNRLK-SLEGQLGTLSKLQLLVIEQNQLE 119
+++L + N LT S+ LRGL L L+LN N+L S+ G+LG L K+Q+L ++ NQL
Sbjct: 39 LKELLMHHNKLTGSIPGVLRGLGKLEQLWLNGNQLSGSIPGELGGLGKVQILRLDGNQLT 98
Query: 120 A-LPSDIQLFSQLGSLYANNNRIT-SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+P + S+L +LY N+N++T S+ G+L GL KL+ ++ NQ++ E L
Sbjct: 99 GTIPEALGALSELKNLYMNDNKLTGSIPGVLGGLGKLEELWVNGNQLSGSIPGELGGLGK 158
Query: 178 LDSISLQNNQITS-------------------------MNSSLSGLTKLAYLYLSHNQLT 212
+ ++ L NQ+T + +L L+KL L ++ N+LT
Sbjct: 159 VQTLRLDGNQLTGSIPGVLGALGKLEGLGLSGNALSGPIPKALGALSKLEILVINDNKLT 218
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINKFGTRNE 243
+ + L+ L+T+ + N + TR E
Sbjct: 219 GSIPHEFGALRNLKTLKIDSNSLTGGPTRGE 249
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 98/168 (58%), Gaps = 4/168 (2%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRL-KSLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFS 129
L+S+ L GL + L L+ N+L ++ LG LS+L+ L++ N+L +P ++
Sbjct: 2 LSSIPGELGGLGKVQILRLDGNQLTGTIPEALGALSELKELLMHHNKLTGSIPGVLRGLG 61
Query: 130 QLGSLYANNNRIT-SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
+L L+ N N+++ S+ G L GL K+Q+ +D NQ+T + L L ++ + +N++
Sbjct: 62 KLEQLWLNGNQLSGSIPGELGGLGKVQILRLDGNQLTGTIPEALGALSELKNLYMNDNKL 121
Query: 189 T-SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
T S+ L GL KL L+++ NQL+ + ++ GL +++T+ L N++
Sbjct: 122 TGSIPGVLGGLGKLEELWVNGNQLSGSIPGELGGLGKVQTLRLDGNQL 169
>gi|198457019|ref|XP_001360521.2| GA21075 [Drosophila pseudoobscura pseudoobscura]
gi|198135827|gb|EAL25096.2| GA21075 [Drosophila pseudoobscura pseudoobscura]
Length = 1335
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV--GFNNLTSLN-NSLRGLTDL 85
++S+ L P L TL L N + I N+FP + R H+ +N + +++ +S L +L
Sbjct: 364 ISSEALAVLPMLKTLDLSRNQLHSIEANSFPKSTRLAHLILNWNEIANVDEHSFAALNNL 423
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L LNNNRL SL G L++L+ L + N LE S + L L +N+I SL
Sbjct: 424 TDLELNNNRLNSLPVGVFKNLNRLKKLALSYNHLEINWSTFRGLLSLQRLQLKSNQIRSL 483
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LA 202
DG+ + ++ +D NQI+ + R NL L +SL NN I+ + T+ L
Sbjct: 484 QDGVFYVMRNIESIELDHNQISSLSRQGLFNLTKLHHLSLSNNSISRIELDTWEFTQSLE 543
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LSHN ++EF + L+RL+ ++L++NK+
Sbjct: 544 SLDLSHNSISEFKPQHLDCLQRLKQLNLAHNKL 576
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 88 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L NN+L ++ LS L + +++N LE +P L + L L NNRI S+
Sbjct: 308 LHLANNKLNDTTVLEIRNLSNLVKVTLKRNLLEVIPKFTGL-TGLKHLILANNRIRSISS 366
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
L L L+ ++ NQ+ + + F L + L N+I +++ S + L L L
Sbjct: 367 EALAVLPMLKTLDLSRNQLHSIEANSFPKSTRLAHLILNWNEIANVDEHSFAALNNLTDL 426
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++N+L + + L RL+ + LSYN +
Sbjct: 427 ELNNNRLNSLPVGVFKNLNRLKKLALSYNHL 457
>gi|320165522|gb|EFW42421.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 743
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 10/207 (4%)
Query: 38 PALITLLLVNNN-ITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNN 93
P T L +NNN IT I +AF + +L + N +TS ++ GLT L LFLN N
Sbjct: 57 PGTTTQLYLNNNSITIISASAFAGLTALTRLELKTNQITSFPADTFIGLTFLRELFLNYN 116
Query: 94 RLKSLEGQ--LGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDG-LLR 149
++ S +G L+ L+ L + NQ+ ++P S + L L +N ITS
Sbjct: 117 QITSFPADTFIG-LTFLRELFLNYNQITSIPTSAFASQTALIQLDLRSNLITSFPADTFI 175
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GLT L+ MDFNQ T + + F L L +SL NQI S+ + + +GLT L +L L++
Sbjct: 176 GLTMLKNLYMDFNQFTSIPANTFTGLTALTFLSLHTNQIASIPANTFTGLTALTFLDLTN 235
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ+T +D GL L +DL+ N+I
Sbjct: 236 NQITNTSVDAFTGLTALTHLDLTDNRI 262
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRL 95
ALI L L +N IT + F ++ L++ FN TS+ N+ GLT L +L L+ N++
Sbjct: 155 ALIQLDLRSNLITSFPADTFIGLTMLKNLYMDFNQFTSIPANTFTGLTALTFLSLHTNQI 214
Query: 96 KSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---ANNNRITSLDG-LLRG 150
S+ T L+ L L + NQ+ + + F+ L +L +NRIT++ G
Sbjct: 215 ASIPANTFTGLTALTFLDLTNNQITN--TSVDAFTGLTALTHLDLTDNRITTISASTFSG 272
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHN 209
LT L++ N++ NQIT + + F L L+ + L NQI+S++ S+ +GLT L + L++N
Sbjct: 273 LTALRLLNLNGNQITTISANTFSGLTTLNYLFLTTNQISSISTSAFAGLTVLTEMSLNNN 332
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+T + L L +DLS N+I
Sbjct: 333 SITSISANTFAVLTALTILDLSDNQITS 360
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 27/197 (13%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWL 88
D G AL L L +N IT I + F +R L++ N +T+++ N+ GLT LN+L
Sbjct: 244 DAFTGLTALTHLDLTDNRITTISASTFSGLTALRLLNLNGNQITTISANTFSGLTTLNYL 303
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-L 147
FL N++ S+ T + L V+ + L NNN ITS+
Sbjct: 304 FLTTNQISSIS----TSAFAGLTVLTEMSL------------------NNNSITSISANT 341
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYL 206
LT L + ++ NQIT + D F +L LD++SL +NQITS+ + + + LT L L L
Sbjct: 342 FAVLTALTILDLSDNQITSIPADAFASLTALDTLSLNDNQITSIPANAFTSLTTLHRLPL 401
Query: 207 SHNQLTEFLLDDIRGLK 223
+N LT +GL
Sbjct: 402 ENNPLTTLPPGLFKGLP 418
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 31/244 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
+++ G AL L L N IT + F +R+L + +N +TS ++ GLT L
Sbjct: 73 ISASAFAGLTALTRLELKTNQITSFPADTFIGLTFLRELFLNYNQITSFPADTFIGLTFL 132
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-----------FSQLGS 133
LFLN N++ S+ + + L L + N + + P+D + F+Q S
Sbjct: 133 RELFLNYNQITSIPTSAFASQTALIQLDLRSNLITSFPADTFIGLTMLKNLYMDFNQFTS 192
Query: 134 LYANN--------------NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ AN N+I S+ GLT L ++ NQIT D F L L
Sbjct: 193 IPANTFTGLTALTFLSLHTNQIASIPANTFTGLTALTFLDLTNNQITNTSVDAFTGLTAL 252
Query: 179 DSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ L +N+IT++++S SGLT L L L+ NQ+T + GL L + L+ N+I+
Sbjct: 253 THLDLTDNRITTISASTFSGLTALRLLNLNGNQITTISANTFSGLTTLNYLFLTTNQISS 312
Query: 238 FGTR 241
T
Sbjct: 313 ISTS 316
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 13/205 (6%)
Query: 43 LLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLE 99
L L N IT I +AF + +L + N +TS ++ GLT L L+++ N+ S+
Sbjct: 135 LFLNYNQITSIPTSAFASQTALIQLDLRSNLITSFPADTFIGLTMLKNLYMDFNQFTSIP 194
Query: 100 GQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---ANNNRIT--SLDGLLRGLTK 153
T L+ L L + NQ+ ++P++ F+ L +L NN+IT S+D GLT
Sbjct: 195 ANTFTGLTALTFLSLHTNQIASIPANT--FTGLTALTFLDLTNNQITNTSVDAF-TGLTA 251
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLT 212
L ++ N+IT + F L L ++L NQIT++++ + SGLT L YL+L+ NQ++
Sbjct: 252 LTHLDLTDNRITTISASTFSGLTALRLLNLNGNQITTISANTFSGLTTLNYLFLTTNQIS 311
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINK 237
GL L + L+ N I
Sbjct: 312 SISTSAFAGLTVLTEMSLNNNSITS 336
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-S 194
N +T++ + G T Q++ ++ N IT++ F L L + L+ NQITS + +
Sbjct: 44 CNGKSLTTIPSAIPGTTT-QLY-LNNNSITIISASAFAGLTALTRLELKTNQITSFPADT 101
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
GLT L L+L++NQ+T F D GL LR + L+YN+I T
Sbjct: 102 FIGLTFLRELFLNYNQITSFPADTFIGLTFLRELFLNYNQITSIPTS 148
>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 481
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+L + L +L L+L NNRL +L ++ L L++L + NQL L
Sbjct: 221 LKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTL 280
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L LY NNR+T+L + L LQ N++ NQ T + + E NL L +
Sbjct: 281 PKEVGKLQNLQELYLYNNRLTTLPKEIGNLQNLQDLNLNSNQFTTLPK-EIWNLQKLQKL 339
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL NQ+T++ + L L L L NQL L ++I L+ L+ +DL N++
Sbjct: 340 SLGRNQLTTLPEEIWNLQNLKTLDLEGNQLA-TLPEEIGNLQNLQKLDLEGNQL 392
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L N +T + E + ++ L +G N LT+L + L +L L L N+L +L
Sbjct: 129 LQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATL 188
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L +E NQL LP +I L LY NNR+T+L + L LQ
Sbjct: 189 PEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELY 248
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N++T + + E ++L NL +SL +NQ+T++ + L L LYL +N+LT L +
Sbjct: 249 LYNNRLTTLPK-EIEDLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNNRLT-TLPKE 306
Query: 219 IRGLKRLRTVDLSYNK 234
I L+ L+ ++L+ N+
Sbjct: 307 IGNLQNLQDLNLNSNQ 322
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L LN+N+L +L ++G L LQ L + +NQL L
Sbjct: 60 LQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTL 119
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ ++ NQ+T + +E NL NL ++
Sbjct: 120 PEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTL-PEEIGNLQNLQTL 178
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ NQ+ ++ + L L L L NQLT L +I L+ L+ + L N++
Sbjct: 179 DLEGNQLATLPEEIGNLQNLQTLDLEGNQLT-TLPKEIGKLQNLKKLYLYNNRL 231
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L L++N+L +L ++G L LQ L + NQL LP +I L
Sbjct: 24 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNL 83
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L N+N++T+L + L LQ ++ NQ+T + +E NL NL ++ L NQ+T++
Sbjct: 84 QKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTL-PEEIWNLQNLQTLDLGRNQLTTL 142
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQLT L ++I L+ L+T+DL N++
Sbjct: 143 PEEIWNLQNLQTLDLGRNQLT-TLPEEIGNLQNLQTLDLEGNQL 185
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L +L + L +L L L++N+L +L ++G L LQ L + NQL L
Sbjct: 37 LRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTL 96
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L +L N++T+L + L LQ ++ NQ+T + +E NL NL ++
Sbjct: 97 SKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTL-PEEIWNLQNLQTL 155
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L NQL L ++I L+ L+T+DL N++
Sbjct: 156 DLGRNQLTTLPEEIGNLQNLQTLDLEGNQLA-TLPEEIGNLQNLQTLDLEGNQL 208
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 9/160 (5%)
Query: 83 TDLNWLFL-------NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
TD+ +L+L +N+ L +L ++G L L+ L + NQL LP +I L L
Sbjct: 5 TDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLD 64
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
++N++T+L + L LQ N++ NQ+T + + E NL NL ++ L NQ+T++ +
Sbjct: 65 LSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSK-EIGNLQNLQTLDLGRNQLTTLPEEI 123
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L L L NQLT L ++I L+ L+T+DL N++
Sbjct: 124 WNLQNLQTLDLGRNQLT-TLPEEIWNLQNLQTLDLGRNQL 162
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L LN+N+ +L ++ L KLQ L + +NQL L
Sbjct: 290 LQELYLYNNRLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTL 349
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++ +L + L LQ +++ NQ+T + + E L L +
Sbjct: 350 PEEIWNLQNLKTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPK-EIGKLQKLKKL 408
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L NN++T++ + L KL L L HNQLT L +I L++L+ +DL N
Sbjct: 409 YLYNNRLTTLPIEIGNLQKLQTLSLGHNQLT-TLPKEIGNLQKLKMLDLGGN 459
>gi|24216023|ref|NP_713504.1| hypothetical protein LA_3324 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075104|ref|YP_005989423.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24197251|gb|AAN50522.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458895|gb|AER03440.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 329
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N +T L +R L +L LFL+NN+L +L ++ L LQ L + N+L
Sbjct: 115 LQALYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQTLYLGNNRLTTF 174
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L LY +N++T L ++ L LQ+ ++ +NQ+ + + E + L NL +
Sbjct: 175 PKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPK-EIEQLKNLQEL 233
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T + + L L LYL +NQLT L +I L+ L+ + L+ N++
Sbjct: 234 NLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTT-LPKEIGQLQNLKVLFLNNNQL 286
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L NN++ L ++G L LQLL + NQL
Sbjct: 43 PLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQNLQLLGLYYNQL 102
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ L +LY NN+IT L +R L L+V + NQ+T + + E + L NL
Sbjct: 103 TILPKEIEQLKNLQALYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPK-EIEQLKNL 161
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L NN++T+ + L L LYL NQLT L +I+ LK L+ +DLSYN++
Sbjct: 162 QTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLT-VLPQEIKQLKNLQLLDLSYNQL 217
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N LT+ + L +L L+L +N+L L ++ L LQLL + NQL+ L
Sbjct: 161 LQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTL 220
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L N++T L + L LQ + +NQ+T + + E L NL +
Sbjct: 221 PKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTTLPK-EIGQLQNLKVL 279
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L NNQ+T++ + L L LYL++NQL+
Sbjct: 280 FLNNNQLTTLPKEIGQLKNLQELYLNNNQLS 310
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + +N L +L + L +L L L N+L L ++ L LQ L + NQL LP +
Sbjct: 210 LDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTTLPKE 269
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L+ NNN++T+L + L LQ ++ NQ+++ ++ Q L IS +
Sbjct: 270 IGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIQKLIPKCQISFE 329
>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
Length = 383
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L N++T + + + KL V N LTS+ + LT L L+L+ N+L S+ +
Sbjct: 172 LWLSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAE 231
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L+ L L + NQL ++P++I L L + NR+TSL + L L F +D
Sbjct: 232 IGQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDR 291
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
N +T V E +L +L +SL NQ+TS+ S + LT L L LS NQLT
Sbjct: 292 NLLTSVPA-EIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLT 341
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L +G+N LTS+ + L L L+L N+L S+ ++G L+ L+ L +E N+L +
Sbjct: 53 SLESLELGYNELTSVPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTS 112
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L +N++TS+ + LT L N++ NQ+T V E + L +L
Sbjct: 113 VPTEIGQLTSLTQLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPA-EIRQLTSLRE 171
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L N +TS+ + + L L L ++ NQLT
Sbjct: 172 LWLSANHLTSVPAEIWQLAALVKLSVTENQLT 203
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTS+ +R LT L L+L+ N L S+ ++ L+ L L + +NQL ++P++I +
Sbjct: 154 NQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLT 213
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY + N++TS+ + LT L ++ NQ+T V E + +L +SL N++T
Sbjct: 214 SLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPA-EIGQIRSLVKLSLHGNRLT 272
Query: 190 SMNSSLSGLTKLAYLYLSHNQLT 212
S+ + + L L L N LT
Sbjct: 273 SLPAEIGQLRALVEFELDRNLLT 295
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L L +N +T + E ++ KL + N LTSL + L L L+ N L S
Sbjct: 237 SLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDRNLLTS 296
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ L L + NQL ++PS+I + LG L + N++TS+ +R L +
Sbjct: 297 VPAEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMRELEAAGCY 356
Query: 158 NMDFN 162
MD +
Sbjct: 357 -MDLD 360
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTS+ + + L L L+ NRL SL ++G L L +++N L ++P++I +
Sbjct: 246 NQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDRNLLTSVPAEIGHLT 305
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L L + N++TS+ + LT L ++ NQ+T V
Sbjct: 306 SLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSV 343
>gi|374331887|ref|YP_005082071.1| outermembrane protein [Pseudovibrio sp. FO-BEG1]
gi|359344675|gb|AEV38049.1| outermembrane protein [Pseudovibrio sp. FO-BEG1]
Length = 290
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 97/200 (48%), Gaps = 3/200 (1%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L N +T I F + L++G N L+ + + LT L L++ +L L
Sbjct: 31 LTDLALTNCGLTVIPSEVFTRKALESLYLGENALSEVPSEFSRLTSLKELYIYGCKLHRL 90
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
L LS+LQ+L + LE LPS I QL LYA+N +T L + LT L+ F
Sbjct: 91 PETLTQLSQLQILDLSHQPLECLPSTIGALKQLRVLYASNTVMTELPNSIGELTALEYFG 150
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
N I + D L NL + L N + + + S L+ L YL +N LT+ L +
Sbjct: 151 CTDNNIRQL-PDSIGQLKNLQELRLYGNGLKELPQTFSKLSSLRETYLRNNALTK-LPPN 208
Query: 219 IRGLKRLRTVDLSYNKINKF 238
I LK+L +DL N+IN+
Sbjct: 209 ISELKQLEILDLRDNQINRL 228
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 49 NITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
+++H P TI R L+ +T L NS+ LT L + +N ++ L +
Sbjct: 104 DLSHQPLECLPSTIGALKQLRVLYASNTVMTELPNSIGELTALEYFGCTDNNIRQLPDSI 163
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSLDGLLRGLTKLQVFNM 159
G L LQ L + N L+ LP Q FS+L SL Y NN +T L + L +L++ ++
Sbjct: 164 GQLKNLQELRLYGNGLKELP---QTFSKLSSLRETYLRNNALTKLPPNISELKQLEILDL 220
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
NQI + D L NL + L+ N + + +S+ LT L L L +LTE
Sbjct: 221 RDNQINRLPED-IGGLTNLYQLDLRANPLEELPNSMKNLTNLRKLDLRWTRLTE 273
>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 492
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 23/199 (11%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L ++ L +L L L +N+L +L ++G L LQLL++ NQL
Sbjct: 45 PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-------- 170
ALP +I L L+ NNN++T+L +R L LQ+ ++ NQ+T++ ++
Sbjct: 105 TALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQ 164
Query: 171 --------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
E L NL +SL +Q+T++ + L L L L +QLT L
Sbjct: 165 ELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLT-ILP 223
Query: 217 DDIRGLKRLRTVDLSYNKI 235
+I L+ L +DLS+N++
Sbjct: 224 QEIGKLQNLHELDLSHNQL 242
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT+L + L +L L L ++L +L ++G L LQLL + ++QL L
Sbjct: 163 LQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTIL 222
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L ++N++T L + L KLQ + NQ+T + + E L NL S+
Sbjct: 223 PQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQ-EIGQLKNLKSL 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQI ++ + L KL LYL +NQLT L +I L+ L+++DLS N++
Sbjct: 282 NLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTT-LPQEIGQLQNLQSLDLSTNRL 334
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N LT L + L L WL+L N+L +L ++G L L+ L + NQ++ +
Sbjct: 232 LHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTI 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SLY NN++T+L + L LQ ++ N++T + + E +L NL +
Sbjct: 292 PKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQ-EIGHLQNLQDL 350
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +NQ+T + + + L L L L +N+LT L +I L+ L+++DL N++ F
Sbjct: 351 YLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT-LSKEIEQLQNLKSLDLRSNQLTIF 406
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 49 NITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL ++ N LT+L + L +L L L+ NRL +L ++
Sbjct: 282 NLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 341
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 342 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 401
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T+ + E L NL + L +NQ+T++ + L L L L NQLT L +I L
Sbjct: 402 QLTIFPK-EIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT-LPQEIGQL 459
Query: 223 KRLRTVDLSYNKIN 236
+ L+ + L+ N+++
Sbjct: 460 QNLQELFLNNNQLS 473
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++ L L+LL + NQL ALP +I L L
Sbjct: 38 LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
N++T+L + L L+V ++ NQ+T + E + L NL + L NNQ+T +
Sbjct: 98 ILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTL-PTEIRQLKNLQMLDLGNNQLTILPKE 156
Query: 195 LSGLTKLAYLYLSHNQLT 212
+ L L LYLS+NQLT
Sbjct: 157 IGQLQNLQELYLSYNQLT 174
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L +N+L ++G L LQ+L + NQL L
Sbjct: 370 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 429
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P I L +L ++N++T+L + L LQ ++ NQ++ + + L
Sbjct: 430 PEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSSQEKKRIRKL 483
>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 299
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L L WL+L N+L +L ++G L L+ L + NQ++ +P +I+
Sbjct: 4 NQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 63
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L SL +NN++T+L + L LQ ++ N++T + + E L NL S+ L N++T
Sbjct: 64 KLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQ-EIGQLQNLQSLDLSTNRLT 122
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE 243
++ + L L LYL NQLT L ++I LK L+T++L N++ E
Sbjct: 123 TLPQEIGHLQNLQELYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRLTTLSKEIE 175
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L + L +L L L+ NRL +L ++G L LQ L + NQL L
Sbjct: 88 LQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTIL 147
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L +L NNR+T+L + L L+ ++ NQ+T+ + E L NL +
Sbjct: 148 PNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPK-EIGQLKNLQVL 206
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L L L NQLT L +I+ LK L+ +DLSYN++
Sbjct: 207 DLGSNQLTTLPEGIGQLKNLQTLDLDSNQLT-TLPQEIKQLKNLQLLDLSYNQL 259
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 42 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL + NR+T+L + L LQ + NQ+T++ +E L NL ++
Sbjct: 102 PQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTIL-PNEIGQLKNLQTL 160
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L+NN++T+++ + L L L L NQLT F +I LK L+ +DL N++
Sbjct: 161 NLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIF-PKEIGQLKNLQVLDLGSNQL 213
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 2/167 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT L N + L +L L L NNRL +L ++ L L+ L + NQL
Sbjct: 134 LQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIF 193
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L +N++T+L + L LQ ++D NQ+T + + E + L NL +
Sbjct: 194 PKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQ-EIKQLKNLQLL 252
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
L NQ+ ++ + L L LYL +NQLT L +I L+ L+ +
Sbjct: 253 DLSYNQLKTLPKEIEQLKNLQTLYLGYNQLT-VLPKEIGQLQNLKVL 298
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L +N+L ++G L LQ+L + NQL L
Sbjct: 157 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 216
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L +L ++N++T+L ++ L LQ+ ++ +NQ+ + + E + L NL ++
Sbjct: 217 PEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPK-EIEQLKNLQTL 275
Query: 182 SLQNNQITSMNSSLSGLTKLAYLY 205
L NQ+T + + L L L+
Sbjct: 276 YLGYNQLTVLPKEIGQLQNLKVLF 299
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NNQ+T++ + L KL +LYL NQLT L +I LK L++++LSYN+I
Sbjct: 3 NNQLTTLPQEIGQLQKLQWLYLPKNQLT-TLPQEIGQLKNLKSLNLSYNQI 52
>gi|398341376|ref|ZP_10526079.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
1051]
Length = 310
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 8/185 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I R L++ N LT+L+ + L +L L+LNNN+L +L +G L L+
Sbjct: 85 AFPKVIGQLQNLRALYLNNNQLTTLSKEIGQLQNLRTLYLNNNQLTTLPKVIGQLQNLRT 144
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL LP +I L +LY NNN++T++ + L L+ + +NQ+T + +
Sbjct: 145 LYLFNNQLTTLPKEIGQLQNLRALYLNNNQLTTVSKEIGKLKNLEWLELSYNQLTAL-PE 203
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E + L NL + L NN+ T + + L L L L+ NQLT L ++I LK LR + L
Sbjct: 204 EIEQLQNLQELDLYNNKFTILPQEIGQLKNLKKLNLNANQLTT-LPNEIGQLKNLRELSL 262
Query: 231 SYNKI 235
S N++
Sbjct: 263 SNNQL 267
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT L + L +L L L+ N L + +G L L+ L + NQL
Sbjct: 47 PLDVRVLDLNGQKLTILPKEIGQLKNLYDLNLDENPLGAFPKVIGQLQNLRALYLNNNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L +I L +LY NNN++T+L ++ L L+ + NQ+T + + E L NL
Sbjct: 107 TTLSKEIGQLQNLRTLYLNNNQLTTLPKVIGQLQNLRTLYLFNNQLTTLPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
++ L NNQ+T+++ + L L +L LS+NQLT L ++I L+ L+ +DL NK
Sbjct: 166 RALYLNNNQLTTVSKEIGKLKNLEWLELSYNQLTA-LPEEIEQLQNLQELDLYNNK 220
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +++ D+ L LN +L L ++G L L L +++N L A P I L +L
Sbjct: 40 LTKAIQNPLDVRVLDLNGQKLTILPKEIGQLKNLYDLNLDENPLGAFPKVIGQLQNLRAL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y NNN++T+L + L L+ ++ NQ+T + + Q L NL ++ L NNQ+T++
Sbjct: 100 YLNNNQLTTLSKEIGQLQNLRTLYLNNNQLTTLPKVIGQ-LQNLRTLYLFNNQLTTLPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L LYL++NQLT + +I LK L ++LSYN++
Sbjct: 159 IGQLQNLRALYLNNNQLTT-VSKEIGKLKNLEWLELSYNQL 198
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + +N LT+L + L +L L L NN+ L ++G L L+ L + NQL LP++
Sbjct: 191 LELSYNQLTALPEEIEQLQNLQELDLYNNKFTILPQEIGQLKNLKKLNLNANQLTTLPNE 250
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
I L L +NN++T+L + L LQ ++ NQ++ ++ + L
Sbjct: 251 IGQLKNLRELSLSNNQLTTLPKEIEQLQNLQWLYLNNNQLSSEEKERIRKL 301
>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
Length = 683
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ K +G N L S+ + LT L L L+ NRL SL ++G L+ L+ L++ NQL +
Sbjct: 507 SLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTS 566
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+DI + L L + NR+TS+ + LT L+ ++ NQ+T V E L +L
Sbjct: 567 LPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSV-PTEIGQLTSLTE 625
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NQ+TS+ + ++ L+ L L+LS N+L
Sbjct: 626 LYLNGNQLTSVPTEIAQLSLLEQLWLSGNRL 656
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ K +G N L S+ + LT L L L+ NRL SL ++G L+ L+ L++ NQL +
Sbjct: 346 SLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTS 405
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+DI + L L + NR+TS+ + LT L+ ++ NQ+T V E L +L
Sbjct: 406 LPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSV-PTEIGQLTSLTE 464
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+TS+ + ++ LT L L ++QLT + +I L L DL N++
Sbjct: 465 LYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTS-VPAEIGQLTSLEKWDLGKNEL 518
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++KL +G N LTSL + LT L L L+ NRL S+ ++G L+ L+ L + NQL +
Sbjct: 392 SLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTS 451
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L LY N N++TS+ + LT L+ +Q+T V E L +L+
Sbjct: 452 VPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPA-EIGQLTSLEK 510
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L N++ S+ + + LT L L L N+LT L +I L L+ + L N++
Sbjct: 511 WDLGKNELASVPAEIGQLTALRELRLDGNRLTS-LPAEIGQLASLKKLLLGCNQLTSL 567
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 23/197 (11%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L TL L N +T + + T +R+L + N LTS+ + LT L L N++L S
Sbjct: 277 SLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTS 336
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ L+ + +N+L ++P++I + L L + NR+TSL + L L+
Sbjct: 337 VPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKL 396
Query: 158 NMDFNQITMVRRD----------------------EFQNLHNLDSISLQNNQITSMNSSL 195
+ NQ+T + D E L +L+ + L +NQ+TS+ + +
Sbjct: 397 LLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEI 456
Query: 196 SGLTKLAYLYLSHNQLT 212
LT L LYL+ NQLT
Sbjct: 457 GQLTSLTELYLNGNQLT 473
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + N LTSL + LT L L L+NNRL S+ ++G L+ L L + NQL ++P+
Sbjct: 211 KLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNLNGNQLTSVPA 270
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
++ + L +L N++TS+ + LT L+ + NQ+T V E L +L +
Sbjct: 271 EVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPA-EIAQLTSLRELGF 329
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N+Q+TS+ + + LT L L N+L + +I L LR + L N++
Sbjct: 330 YNSQLTSVPAEIGQLTSLEKWDLGKNELAS-VPAEIGQLTALRELRLDGNRLTSL 383
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LTS+ + LT L L N++L S+ ++G L+ L+ + +N+L +
Sbjct: 461 SLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELAS 520
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD---------- 170
+P++I + L L + NR+TSL + L L+ + NQ+T + D
Sbjct: 521 VPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWEL 580
Query: 171 ------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
E L +L+ + L +NQ+TS+ + + LT L LYL+ NQLT + +
Sbjct: 581 RLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTS-VPTE 639
Query: 219 IRGLKRLRTVDLSYNKINKF 238
I L L + LS N++
Sbjct: 640 IAQLSLLEQLWLSGNRLKSV 659
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 7/233 (3%)
Query: 7 FEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKL 65
E+ V L L D + TG+ P L +++ L L N +T + E ++R+L
Sbjct: 180 MENSRVVKLELEDFD-LTGAVPAEIGQLT---SMVKLSLTKNQLTSLPAEIGQLTSLREL 235
Query: 66 HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
+ N LTS+ + LT L L LN N+L S+ ++ L+ L L + NQL ++P+DI
Sbjct: 236 ALDNNRLTSVPAEIGQLTSLTELNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADI 295
Query: 126 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+ L L+ N++TS+ + LT L+ +Q+T V E L +L+ L
Sbjct: 296 GQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPA-EIGQLTSLEKWDLGK 354
Query: 186 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N++ S+ + + LT L L L N+LT L +I L L+ + L N++
Sbjct: 355 NELASVPAEIGQLTALRELRLDGNRLTS-LPAEIGQLASLKKLLLGCNQLTSL 406
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L LLL N +T + + T + +L + N LTS+ + LT L L L++N+L S
Sbjct: 553 SLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTS 612
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
+ ++G L+ L L + NQL ++P++I S L L+ + NR+ S+ +R L
Sbjct: 613 VPTEIGQLTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIREL 666
>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
Length = 642
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L + N LTS+ + L L WL L +N+L S+ ++G L L+LL + NQL +
Sbjct: 190 SLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTS 249
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L +L +N++TS+ + LT L+ +D N++T V E L +L
Sbjct: 250 VPAEIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPV-EIGQLTSLVR 308
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L+ NQ+TS+ + + LT L +L L +NQLT +I L L+ + L N++
Sbjct: 309 LELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSV-PAEIGQLAALKELCLYGNQLTSV 365
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 3/201 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
AL L L N +T + E ++ L++G N LTS+ + LT L L L N+L S
Sbjct: 144 ALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQLTS 203
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ LQ L ++ N+L ++P++I L L N N++TS+ + L L+
Sbjct: 204 VPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENL 263
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQ+T V E L +L + L +N++TS+ + LT L L L NQLT
Sbjct: 264 LLGHNQLTSVPA-EIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSV-PA 321
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L L+ ++L YN++
Sbjct: 322 EIWQLTSLKWLNLGYNQLTSV 342
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 22/176 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTS+ + LT L WL L N+L S+ ++G L+ L+ L + NQL +
Sbjct: 305 SLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTS 364
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD---------- 170
+P+++ S L L + NR+TSL + LT L+ + NQ+T V +
Sbjct: 365 VPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLL 424
Query: 171 ------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
E L +L + L++N++T + + + LT L +LYL+ NQLT
Sbjct: 425 ILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSL 480
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L + N LTS+ + L L L L +N+L S+ ++G L+ L+ L ++ N+L +
Sbjct: 236 ALKLLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTS 295
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P +I + L L N++TS+ + LT L+ N+ +NQ+T V E L L
Sbjct: 296 VPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPA-EIGQLAALKE 354
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NQ+TS+ + + L+ L L LS N+LT L +I L LR + LS N++
Sbjct: 355 LCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTS-LPAEIGQLTSLRELRLSDNQLTSV 411
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 47 NNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
NN +T + E ++ L++G N LTS+ + LT L L L +NRL S+ ++G L
Sbjct: 60 NNQLTSVPAEIGQLTSLTHLYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQL 119
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ L+ L +E NQL ++P++I L L N++TS+ + LT L + NQ+T
Sbjct: 120 ASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLT 179
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL--LDDIRGLK 223
V L +L ++L NQ+TS+ + + L L +L L N+LT + +R LK
Sbjct: 180 SVPA-WIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALK 238
Query: 224 RLR 226
LR
Sbjct: 239 LLR 241
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ N LT + + LT L WL+L N+L SL ++G L+ L ++ NQL ++P++
Sbjct: 447 LHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTSVPAE 506
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L L +N++TS+ + LT L+ N+ N +T++ E L +L + L
Sbjct: 507 IGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPA-EIGRLTSLKGLYLD 565
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
N++TS+ + + LT L L+L+ NQLT
Sbjct: 566 ENELTSVPAEIGQLTSLQELWLNDNQLTSL 595
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 3/199 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
AL L L N +T + E +RKL + N LTSL + LT L L L++N+L S
Sbjct: 351 ALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTS 410
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L L+LL++ NQL ++P++I + L L+ +NR+T + + LT L+
Sbjct: 411 VPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWL 470
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQ+T + E L +L L NQ+TS+ + + LT L +L L NQLT +
Sbjct: 471 YLAENQLTSLPA-EIGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAE 529
Query: 218 DIRGLKRLRTVDLSYNKIN 236
R L LR +++S N +
Sbjct: 530 VGR-LTALRELNVSRNALT 547
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 45 LVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
LV+N +T + E +R+L+V N LT L + LT L L+L+ N L S+ ++G
Sbjct: 518 LVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEIG 577
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L+ LQ L + NQL +LP++I L L L N++TS+ +R KL+ +
Sbjct: 578 QLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSMPAAIR---KLKAAGCHVDM 634
Query: 164 ITMVRRDE 171
V DE
Sbjct: 635 DKGVTVDE 642
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ ++G LS L++L + L ++P++I + LG L+ +NN++TS+ + LT L
Sbjct: 19 AVPAEVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTH 78
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ NQ+T V L +L + L +N++TS+ + + L L L+L NQLT
Sbjct: 79 LYLGCNQLTSVPA-WIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSV 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTS+ + LT L L ++ N L L ++G L+ L+ L +++N+L ++P++I +
Sbjct: 521 NQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEIGQLT 580
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT----MVRRDEFQNLH 176
L L+ N+N++TSL + L L + + NQ+T +R+ + H
Sbjct: 581 SLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSMPAAIRKLKAAGCH 631
>gi|417786460|ref|ZP_12434151.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|409950393|gb|EKO04921.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
Length = 305
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L N + L +L L LNNN+LK+L ++G L LQ L + NQ + +
Sbjct: 137 LQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLQRLDLGYNQFKII 196
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I+ L L NNN++T+L + L LQ + +NQ+T++ +E L NL +
Sbjct: 197 PNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQLTIL-PNEIGQLKNLQVL 255
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+ +++ + L L L L +NQL+ + IR L
Sbjct: 256 ELNNNQLKTLSKEIGQLKNLKRLELDNNQLSSEEKERIRKL 296
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 48/223 (21%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L+ L L+ N L + ++G L L++L + NQL
Sbjct: 42 PLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQL 101
Query: 119 EALPSDI------------------------QL-------------------FSQLGSLY 135
+ P +I QL QL +L
Sbjct: 102 KTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQ 161
Query: 136 A---NNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
A NNN++ +L + L LQ ++ +NQ ++ +E + L NL + L NNQ+T+++
Sbjct: 162 ALELNNNQLKTLSKEIGQLKNLQRLDLGYNQFKII-PNEIEQLQNLQVLELNNNQLTTLS 220
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L LYLS+NQLT L ++I LK L+ ++L+ N++
Sbjct: 221 KEIGRLQNLQELYLSYNQLT-ILPNEIGQLKNLQVLELNNNQL 262
>gi|421493638|ref|ZP_15940993.1| hypothetical protein MU9_2163 [Morganella morganii subsp. morganii
KT]
gi|455739158|ref|YP_007505424.1| hypothetical protein MU9_2005 [Morganella morganii subsp. morganii
KT]
gi|400192015|gb|EJO25156.1| hypothetical protein MU9_2163 [Morganella morganii subsp. morganii
KT]
gi|455420721|gb|AGG31051.1| hypothetical protein MU9_2005 [Morganella morganii subsp. morganii
KT]
Length = 291
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
Query: 47 NNNITHIHENAFPPTIRKLHVGFNN-LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
N T I PP R++ +NN L+ +LR T L L L+ N+L + + L
Sbjct: 16 NGGYTSIDAFITPPYTRQVISAYNNQLSEYPAALRHCTSLRVLNLSCNQLAYIPPDIAQL 75
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ ++L + N + +P +I QL LY + N +SL GL L+ FN NQ+T
Sbjct: 76 TACEMLDLGHNCIADVPPEIGELHQLQYLYLSENGYSSLPSSFSGLKNLRYFNATDNQLT 135
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ F + ++ I L NN+IT ++S++SGL ++L +N++T + D+I + L
Sbjct: 136 AIPA-WFSEMEKMEEIRLYNNRITELSSAVSGLKNTREMHLMNNKITA-VPDEIAAVAAL 193
Query: 226 RTVDLSYNKI 235
+DL+ N++
Sbjct: 194 EILDLNNNRV 203
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R + N LT++ + + + L NNR+ L + L + + + N++ A+
Sbjct: 124 LRYFNATDNQLTAIPAWFSEMEKMEEIRLYNNRITELSSAVSGLKNTREMHLMNNKITAV 183
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I + L L NNNR+ + + L +L N+ FN + + + + L +L +
Sbjct: 184 PDEIAAVAALEILDLNNNRVAFISPEISRLQQLNTLNLRFNALKALPENTGE-LSSLLYL 242
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L+ NQ++++ SL+ LT+L L L N +
Sbjct: 243 DLRANQLSTLPDSLAALTQLRKLDLRWNNFS 273
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R++H+ N +T++ + + + L L LNNNR+ + ++ L +L L + N L+ALP
Sbjct: 171 REMHLMNNKITAVPDEIAAVAALEILDLNNNRVAFISPEISRLQQLNTLNLRFNALKALP 230
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
+ S L L N++++L L LT+L+ ++ +N +++
Sbjct: 231 ENTGELSSLLYLDLRANQLSTLPDSLAALTQLRKLDLRWNNFSVI 275
>gi|124009683|ref|ZP_01694354.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123984287|gb|EAY24631.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 373
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + N T L ++ T L L++N+N+LK+L +G +LQ L + NQL LP
Sbjct: 160 ELSLNHNKFTQLAENIVQFTQLQKLYINHNQLKTLPKNIGQCGQLQKLYLAHNQLTTLPE 219
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I +QL L A++NR+ L + +T L +++NQ+ + + Q L+ L + +
Sbjct: 220 SIGQLTQLNELKASHNRLAELPKSIGQITGLYNLRLEYNQLIQLPKSIGQ-LNWLYHLHI 278
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+NQ+T + S+ + L YL++SHNQL + L + I L +L+ +++S+N++
Sbjct: 279 DHNQLTELPESIGHMNWLYYLHVSHNQL-DTLPESIGQLAQLQVLEVSHNRL 329
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTSL S+ L L L+L +N+L L L +L LL ++QN LPS IQ F
Sbjct: 97 NFLTSLPESIGQLKQLKKLYLQDNQLSDLPKSFAQLLQLTLLNLDQNSFSDLPSGIQSFE 156
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N+N+ T L + T+LQ ++ NQ+ + ++ Q L + L +NQ+T
Sbjct: 157 CLLELSLNHNKFTQLAENIVQFTQLQKLYINHNQLKTLPKNIGQ-CGQLQKLYLAHNQLT 215
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFL--LDDIRGLKRLRTVDLSYNKI 235
++ S+ LT+L L SHN+L E + I GL LR L YN++
Sbjct: 216 TLPESIGQLTQLNELKASHNRLAELPKSIGQITGLYNLR---LEYNQL 260
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ N LT L S+ + L +L +++N+L +L +G L++LQ+L + N+L LP
Sbjct: 276 LHIDHNQLTELPESIGHMNWLYYLHVSHNQLDTLPESIGQLAQLQVLEVSHNRLTTLPKS 335
Query: 125 IQLFSQLGSLYANNNRITSLD 145
I QL SL N I +
Sbjct: 336 IGRLRQLKSLGLTGNNIAPAE 356
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 24/151 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL------------- 108
++KL++ N LT+L S+ LT LN L ++NRL L +G ++ L
Sbjct: 204 LQKLYLAHNQLTTLPESIGQLTQLNELKASHNRLAELPKSIGQITGLYNLRLEYNQLIQL 263
Query: 109 -----QL-----LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
QL L I+ NQL LP I + L L+ ++N++ +L + L +LQV
Sbjct: 264 PKSIGQLNWLYHLHIDHNQLTELPESIGHMNWLYYLHVSHNQLDTLPESIGQLAQLQVLE 323
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+ N++T + + L L S+ L N I
Sbjct: 324 VSHNRLTTLPKS-IGRLRQLKSLGLTGNNIA 353
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 78 SLRGLTDLNW--LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
S+ +T LN L L +L L Q+G L++LQ + N L +LP I QL LY
Sbjct: 57 SVEAITRLNTEDLKLPKYQLAHLPKQIGELAQLQSIDACNNFLTSLPESIGQLKQLKKLY 116
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+N+++ L L +L + N+D N + + Q+ L +SL +N+ T + ++
Sbjct: 117 LQDNQLSDLPKSFAQLLQLTLLNLDQNSFSDLPSG-IQSFECLLELSLNHNKFTQLAENI 175
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
T+L LY++HNQL + L +I +L+ + L++N++
Sbjct: 176 VQFTQLQKLYINHNQL-KTLPKNIGQCGQLQKLYLAHNQL 214
>gi|443290345|ref|ZP_21029439.1| putative Leucine-rich repeat protein [Micromonospora lupini str.
Lupac 08]
gi|385886672|emb|CCH17513.1| putative Leucine-rich repeat protein [Micromonospora lupini str.
Lupac 08]
Length = 1135
Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 118/231 (51%), Gaps = 13/231 (5%)
Query: 10 GHAVALNLIDLEPETGSHPLTSDDLKGTPA---LITLLLVNNNITHIHEN--AFPPTIRK 64
GH V L + L PE ++ L+ TPA +++L L NNN+ + + A ++
Sbjct: 19 GH-VNLGGLGLTPED-----LTELLRDTPAFADVVSLDLANNNLGTLPDAVAAAWTSLIV 72
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N LT+L +++ T L L L+ NRL +L + + L+ LV+++N+L LP
Sbjct: 73 LDLSSNGLTALPDTVAAWTALERLVLSGNRLTALPDAVAAWTALKRLVMDRNRLGELPHA 132
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
+ ++ L L + N++ L + T L+ +MD+NQ+ + D LD + L
Sbjct: 133 VAGWTALTQLNVDRNKLGELPDAVAAWTALERLDMDYNQVRAL-PDAVAAWTRLDVLYLD 191
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N++T++ +++ T L L+L NQLT L D + L + L N++
Sbjct: 192 DNELTALPDAVAAWTALNELHLDSNQLTA-LPDAVAAWTALNELHLDDNQL 241
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LT+L +++ T LN L L++N+L +L + + L L ++ NQL LP
Sbjct: 188 LYLDDNELTALPDAVAAWTALNELHLDSNQLTALPDAVAAWTALNELHLDDNQLTVLPEA 247
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
+ +++L L+ +NR+T+L + T L + ++ NQ+T V D +L + L+
Sbjct: 248 VAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLYDNQLT-VLPDAVAAWTDLTDLYLE 306
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N++T++ ++ G L L++ N LT L I L +LR + + N +
Sbjct: 307 SNRLTALPDAVGGWNALTDLFMEGNDLTA-LPGAIGRLAKLRMLVVDGNPL 356
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 105/205 (51%), Gaps = 3/205 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D + AL L++ N + + H A + +L+V N L L +++ T L L +
Sbjct: 108 DAVAAWTALKRLVMDRNRLGELPHAVAGWTALTQLNVDRNKLGELPDAVAAWTALERLDM 167
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 150
+ N++++L + ++L +L ++ N+L ALP + ++ L L+ ++N++T+L +
Sbjct: 168 DYNQVRALPDAVAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPDAVAA 227
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
T L ++D NQ+T V + L + L++N++T++ +++ T L L L NQ
Sbjct: 228 WTALNELHLDDNQLT-VLPEAVAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLYDNQ 286
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKI 235
LT L D + L + L N++
Sbjct: 287 LT-VLPDAVAAWTDLTDLYLESNRL 310
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D + AL L L +N +T + + T + +LH+ N LT L ++ T+L+ L L
Sbjct: 200 DAVAAWTALNELHLDSNQLTALPDAVAAWTALNELHLDDNQLTVLPEAVAAWTELSGLHL 259
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 150
+NRL +L + + L LL + NQL LP + ++ L LY +NR+T+L + G
Sbjct: 260 RSNRLTALPDAVAAWTALTLLDLYDNQLTVLPDAVAAWTDLTDLYLESNRLTALPDAVGG 319
Query: 151 LTKLQVFNMDFNQIT 165
L M+ N +T
Sbjct: 320 WNALTDLFMEGNDLT 334
>gi|443477390|ref|ZP_21067241.1| small GTP-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017486|gb|ELS31914.1| small GTP-binding protein [Pseudanabaena biceps PCC 7429]
Length = 945
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L+ G N +T + +++ L +L L L+NN + ++ +L LSKLQ L + N++ +P
Sbjct: 71 QLYFGCNQITQIPDAIANLANLTLLHLSNNHISNITDKLFKLSKLQKLNLSLNKISTIPE 130
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L ++ N+NRI + + L LQV N+ +N+ D L NL +I L
Sbjct: 131 EISQLYNLEEIHLNSNRINIIPDTIGDLYNLQVLNLAYNKQICTIPDTISKLFNLVTIYL 190
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ NQI ++ +S L+KL L L+ NQ++ + ++I L L+ + L N+I
Sbjct: 191 EGNQIATIPHGISQLSKLQTLMLNENQIS-IIPNEISNLSNLQELSLYKNQI 241
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 113/200 (56%), Gaps = 5/200 (2%)
Query: 39 ALITLL-LVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
A +TLL L NN+I++I + F ++KL++ N ++++ + L +L + LN+NR+
Sbjct: 90 ANLTLLHLSNNHISNITDKLFKLSKLQKLNLSLNKISTIPEEISQLYNLEEIHLNSNRIN 149
Query: 97 SLEGQLGTLSKLQLLVIEQN-QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
+ +G L LQ+L + N Q+ +P I L ++Y N+I ++ + L+KLQ
Sbjct: 150 IIPDTIGDLYNLQVLNLAYNKQICTIPDTISKLFNLVTIYLEGNQIATIPHGISQLSKLQ 209
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQI+++ +E NL NL +SL NQI + S++ L+ L LYLS NQ++ +
Sbjct: 210 TLMLNENQISIIP-NEISNLSNLQELSLYKNQIRLIPDSITKLSNLNELYLSRNQIS-MI 267
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
D + + +L+ + L N +
Sbjct: 268 PDSLSDMTKLKALGLRDNPL 287
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Query: 48 NNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N +T I + F T +++LH+ FN +T + +S+ L +L L L++N++ + + L
Sbjct: 8 NRLTAIPQEIFQLTNLKELHIPFNQITQIPDSICNLANLTLLDLSSNQITQIPDVICNLV 67
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
L L NQ+ +P I + L L+ +NN I+++ L L+KLQ N+ N+I+
Sbjct: 68 NLTQLYFGCNQITQIPDAIANLANLTLLHLSNNHISNITDKLFKLSKLQKLNLSLNKIST 127
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ +E L+NL+ I L +N+I + ++ L L L L++N+ + D I L L
Sbjct: 128 I-PEEISQLYNLEEIHLNSNRINIIPDTIGDLYNLQVLNLAYNKQICTIPDTISKLFNLV 186
Query: 227 TVDLSYNKI 235
T+ L N+I
Sbjct: 187 TIYLEGNQI 195
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
P TI KL ++ N + ++ + + L+ L L LN N++ + ++ LS LQ
Sbjct: 174 TIPDTISKLFNLVTIYLEGNQIATIPHGISQLSKLQTLMLNENQISIIPNEISNLSNLQE 233
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +NQ+ +P I S L LY + N+I+ + L +TKL+ + N + + +
Sbjct: 234 LSLYKNQIRLIPDSITKLSNLNELYLSRNQISMIPDSLSDMTKLKALGLRDNPLP-IPEE 292
Query: 171 EFQNLHNLDSI 181
N HN +I
Sbjct: 293 ILNNYHNPTAI 303
>gi|418680750|ref|ZP_13241991.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|421115503|ref|ZP_15575909.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|400327539|gb|EJO79787.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|410012987|gb|EKO71072.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|455667923|gb|EMF33190.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 288
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N +T+L + L +L L LN N+L+++ ++G L KL+ L IE N+L+ L
Sbjct: 75 LKKLYLSANEITTLPPEIGNLKNLQVLSLNGNKLETIPKEIGNLKKLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNKLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L N++ +L + L L+ + NQ+ ++ + E NL L + L N++T
Sbjct: 120 KLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRMHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTD---LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
KL + T L + + D LN+ N LK+L ++G L L+ L + N++
Sbjct: 28 KLPLKPGEYTDLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITT 87
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L L N N++ ++ + L KL+ ++++N++ + + E NL NL
Sbjct: 88 LPPEIGNLKNLQVLSLNGNKLETIPKEIGNLKKLKELSIEWNKLQTLPK-EIGNLKNLKE 146
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L NQ+ + + L KL ++LS N+LT+ L +I+ L+ L + L N+
Sbjct: 147 LYLSRNQLKILPQEIGNLRKLQRMHLSTNELTK-LPQEIKNLESLLEIYLYDNQ 199
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L LY N++T L + L +L ++ NQ ++ Q L +I
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPSEEKERIQRLLPKCNI 286
Query: 182 S 182
S
Sbjct: 287 S 287
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ + + L L +SL+ NQ S
Sbjct: 241 LEENQLTMLPK-QIAALKQLARLSLKGNQFPS 271
>gi|363731180|ref|XP_427026.3| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Gallus
gallus]
Length = 1894
Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 11/227 (4%)
Query: 10 GHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVG 68
GH +ALN + L+ S P +D+ L+TL L N + + + +F + +L +G
Sbjct: 132 GH-LALNDVSLQ----SLP---NDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLG 183
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
N+L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++
Sbjct: 184 GNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEVSGL 243
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
L L + N + + + L +L + +D N++T V + + NL + L N +
Sbjct: 244 VALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEV-TESIGDCENLSELILTENML 302
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
T++ SL LTKL L + N+LT L +I G L + L N++
Sbjct: 303 TALPKSLGKLTKLTNLNVDRNRLTS-LPAEIGGCANLNVLSLRDNRL 348
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDL 85
D L P L L L N ++ A PP + L V N L L N + GL L
Sbjct: 192 DTLGALPNLRELWLDRNQLS-----ALPPELGNLRRLVCLDVSENKLEQLPNEVSGLVAL 246
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
L L+ N L+ + +G L +L +L ++QN+L + I L L N +T+L
Sbjct: 247 TDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLSELILTENMLTALP 306
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
L LTKL N+D N++T + E NL+ +SL++N++ + + L+ T+L L
Sbjct: 307 KSLGKLTKLTNLNVDRNRLTSLPA-EIGGCANLNVLSLRDNRLALLPAELANTTELHVLD 365
Query: 206 LSHNQLTE--FLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 245
++ N+L F L ++ LK L + + KF T ++ K
Sbjct: 366 VAGNRLQNLPFALTNL-NLKALWLAENQSQPMLKFQTEDDEK 406
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 3/199 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F ++ N L+ L L L L LN+ L+SL
Sbjct: 85 LVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLGHLALNDVSLQSL 144
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+G L+ L L + +N L+ LP+ + +L L N + L L L L+
Sbjct: 145 PNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 204
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + +SGL L L LS N L E + D
Sbjct: 205 LDRNQLSAL-PPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLLSQN-LLECIPDG 262
Query: 219 IRGLKRLRTVDLSYNKINK 237
I LK+L + + N++ +
Sbjct: 263 IGQLKQLSILKVDQNRLTE 281
>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
Length = 993
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L + FN + L ++ LT L L L NN++ L +G L+ L L + +N++
Sbjct: 280 SLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAE 339
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP I + L SLY +NN+I L + LT L ++ FNQI + + NL +L S
Sbjct: 340 LPQTIGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQT-IGNLTSLTS 398
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NNQI + ++ LT L L+LS+NQ+ E L I L L +++L N+I
Sbjct: 399 LNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAE-LPQTIGNLTSLTSLNLWSNQI 452
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL +G N+L+ L S+ LT+L L++ N+L + +G L+ L L + +NQ+ L
Sbjct: 166 LKKLSLGGNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAEL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I + L SL +N+I + + LT L + NQI ++ + NL +L S+
Sbjct: 226 PQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAII-PEAIGNLTSLTSL 284
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQI + ++ LT L L L +NQ+ E L I L L + L NKI
Sbjct: 285 DLSFNQIAELPQTIGNLTSLTSLSLRNNQIAE-LPQTIGNLTSLTNLFLGRNKI 337
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N + L ++ LT L LFL+NN++ L +G L+ L L + NQ+ LP I +
Sbjct: 404 NQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQTIGNLT 463
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L SL + N+I L ++ LT L N+ FNQI + + NL +L + L NNQI
Sbjct: 464 SLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQT-IGNLTSLSDLDLSNNQIA 522
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++ LT L L L +NQ+ + + R L L +DL N +
Sbjct: 523 ELPQTIGNLTSLTDLKLYNNQIA-VIPEWFRSLNNLEKLDLRGNPV 567
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 113/241 (46%), Gaps = 18/241 (7%)
Query: 10 GHAVALNLIDLEPETGSHP-LTSDD-----LKGTP---ALIT----LLLVNNNITHIHEN 56
G A+ L ++ P S P LTS D +K P A IT L L N I + N
Sbjct: 54 GKAIGNLLTEIPPVILSLPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESL-PN 112
Query: 57 AFPPTIRKLHVGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE 114
F R +G N L + + LT+L +L + N L+ L + L L+ L +
Sbjct: 113 WFSEMTRLTELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLG 172
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
N L LP I L ++L LY N++T + + LT L N+ NQI + +
Sbjct: 173 GNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELPQ-MIGK 231
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L +L S+ L +NQI + ++ LT L L LS NQ+ + + I L L ++DLS+N+
Sbjct: 232 LTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIA-IIPEAIGNLTSLTSLDLSFNQ 290
Query: 235 I 235
I
Sbjct: 291 I 291
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++G N + L + LT L L L +N++ + +G L+ L L + NQ+
Sbjct: 211 SLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAI 270
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P I + L SL + N+I L + LT L ++ NQI + + NL +L +
Sbjct: 271 IPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQT-IGNLTSLTN 329
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N+I + ++ LT L LYLS+NQ+ E L I L L ++DLS+N+I
Sbjct: 330 LFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAE-LPQTIGNLTSLTSLDLSFNQI 383
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 39 ALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
+L +L L NN I + P TI L + FN + L ++ LT L L L N
Sbjct: 349 SLTSLYLSNNQIAEL-----PQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYN 403
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N++ L +G L+ L L + NQ+ LP I + L SL +N+I L + LT
Sbjct: 404 NQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQTIGNLT 463
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L ++ FNQI + + NL +L +++L NQI + ++ LT L+ L LS+NQ+
Sbjct: 464 SLTSLDLSFNQIAELPQ-MIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLDLSNNQIA 522
Query: 213 EFLLDDIRGLKRLRTVDLSYNKI 235
E L I L L + L N+I
Sbjct: 523 E-LPQTIGNLTSLTDLKLYNNQI 544
>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 400
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 104/182 (57%), Gaps = 2/182 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L L NN+L +L ++G L LQ+L + NQ++ +
Sbjct: 140 LQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTI 199
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SL NN++T+L + L KLQ ++ N++T + +E L NL +
Sbjct: 200 PKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTL-PNEIGQLQNLQDL 258
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +NQ+T + + + L L LYL N+LT L DI L+ L+++DL N++ F
Sbjct: 259 YLGSNQLTILPNEIGQLKNLQTLYLRSNRLTT-LSKDIEQLQNLKSLDLWNNQLTTFPKE 317
Query: 242 NE 243
E
Sbjct: 318 IE 319
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L +L + L +L L+L+ N+LK+L ++ L LQ L + NQL L
Sbjct: 94 LRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTL 153
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L L+ NN++ +L + L LQV + +NQI + + E + L L S+
Sbjct: 154 PTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPK-EIEKLQKLQSL 212
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + + L KL L LS N+LT L ++I L+ L+ + L N++
Sbjct: 213 GLGNNQLTALPNEIGQLQKLQELSLSTNRLTT-LPNEIGQLQNLQDLYLGSNQL 265
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+LK+L ++G L L++L + NQL
Sbjct: 45 PLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ LP +I+ L LY + N++ +L +R L LQ + NQ+T + E L NL
Sbjct: 105 KTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTL-PTEIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NNQ+ ++ + L L L LS+NQ+ + + +I L++L+++ L N++
Sbjct: 164 QRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQI-KTIPKEIEKLQKLQSLGLGNNQL 219
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L N + L +L L+L +N+L L ++G L LQ L + N+L L
Sbjct: 232 LQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTL 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
DI+ L SL NN++T+ + L LQV ++ NQ+T + + E L NL
Sbjct: 292 SKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPK-EIGQLKNLQVF 350
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+T++ + + L L LYL NQL+ + IR L
Sbjct: 351 ELNNNQLTTLPNEIGQLQNLQELYLIDNQLSSEEKERIRKL 391
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +++ D+ L L+ +LK+L ++G L LQ L + NQL+ LP +I L L
Sbjct: 38 LTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ +L + L LQ + +NQ+ + + E + L NL + L++NQ+T++ +
Sbjct: 98 ELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPK-EIRQLQNLQELYLRDNQLTTLPTE 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L+L +NQL L ++I LK L+ ++LSYN+I
Sbjct: 157 IGQLKNLQRLHLWNNQLMT-LPEEIGQLKNLQVLELSYNQI 196
>gi|255070539|ref|XP_002507351.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
gi|226522626|gb|ACO68609.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
Length = 403
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+RKL++ N LTS+ + LT L + L +N+L S+ ++G L+ L+ L + NQL +
Sbjct: 194 ALRKLNLSRNQLTSVPAEIGQLTSLTEVHLFSNQLTSVPAEIGQLTSLRQLHLGGNQLTS 253
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L N N +TS+ + LT L++ ++D N++T V E L +L+
Sbjct: 254 VPAEIGQLTSLEWLSLNGNHLTSVPAEIGQLTSLRLLHLDGNRLTSV-PAEIGQLTSLEW 312
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+SL N +TS+ S + LT L LYL+ NQLT
Sbjct: 313 LSLNGNHLTSVPSEIGQLTSLIVLYLNGNQLT 344
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+LH+G N LTS+ + LT L WL LN N L S+ ++G L+ L+LL ++ N+L +
Sbjct: 240 SLRQLHLGGNQLTSVPAEIGQLTSLEWLSLNGNHLTSVPAEIGQLTSLRLLHLDGNRLTS 299
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
+P++I + L L N N +TS+ + LT L V ++ NQ+T V
Sbjct: 300 VPAEIGQLTSLEWLSLNGNHLTSVPSEIGQLTSLIVLYLNGNQLTSV 346
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
+LG L KL L +NQL ++P++I + L ++ +N++TS+ + LT L+ ++
Sbjct: 191 RLGALRKLNL---SRNQLTSVPAEIGQLTSLTEVHLFSNQLTSVPAEIGQLTSLRQLHLG 247
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
NQ+T V E L +L+ +SL N +TS+ + + LT L L+L N+LT
Sbjct: 248 GNQLTSV-PAEIGQLTSLEWLSLNGNHLTSVPAEIGQLTSLRLLHLDGNRLT 298
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
A+P++I L L + N++TS+ + LT L ++ NQ+T V E L +L
Sbjct: 184 AVPAEIWRLGALRKLNLSRNQLTSVPAEIGQLTSLTEVHLFSNQLTSV-PAEIGQLTSLR 242
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NQ+TS+ + + LT L +L L+ N LT + +I L LR + L N++
Sbjct: 243 QLHLGGNQLTSVPAEIGQLTSLEWLSLNGNHLTS-VPAEIGQLTSLRLLHLDGNRLTSV 300
>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 400
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 104/182 (57%), Gaps = 2/182 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L L NN+L +L ++G L LQ+L + NQ++ +
Sbjct: 140 LQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTI 199
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SL NN++T+L + L KLQ ++ N++T + +E L NL +
Sbjct: 200 PKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTL-PNEIGQLQNLQDL 258
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +NQ+T + + + L L LYL N+LT L DI L+ L+++DL N++ F
Sbjct: 259 YLGSNQLTILPNEIGQLKNLQTLYLRSNRLTT-LSKDIEQLQNLKSLDLWNNQLTTFPKE 317
Query: 242 NE 243
E
Sbjct: 318 IE 319
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L +L + L +L L+L+ N+LK+L ++ L LQ L + NQL L
Sbjct: 94 LRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTL 153
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L L+ NN++ +L + L LQV + +NQI + + E + L L S+
Sbjct: 154 PTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPK-EIEKLQKLQSL 212
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + + L KL L LS N+LT L ++I L+ L+ + L N++
Sbjct: 213 GLGNNQLTALPNEIGQLQKLQELSLSTNRLTT-LPNEIGQLQNLQDLYLGSNQL 265
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L N + L +L L+L +N+L L ++G L LQ L + N+L L
Sbjct: 232 LQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTL 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
DI+ L SL NN++T+ + L LQV ++ NQ+T + + E L NL
Sbjct: 292 SKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPK-EIGQLKNLQVF 350
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+T++ + L L LYL NQL+ + IR L
Sbjct: 351 ELNNNQLTTLPKEIGQLQNLQELYLIDNQLSSEEKERIRKL 391
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L+ N+LK+L ++G L L++L + NQL
Sbjct: 45 PLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ LP +I+ L LY + N++ +L +R L LQ + NQ+T + E L NL
Sbjct: 105 KTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTL-PTEIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NNQ+ ++ + L L L LS+NQ+ + + +I L++L+++ L N++
Sbjct: 164 QRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQI-KTIPKEIEKLQKLQSLGLGNNQL 219
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +++ D+ L L+ +LK+L ++G L LQ L + NQL+ LP +I L L
Sbjct: 38 LTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ +L + L LQ + +NQ+ + + E + L NL + L++NQ+T++ +
Sbjct: 98 ELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPK-EIRQLQNLQELYLRDNQLTTLPTE 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L+L +NQL L ++I LK L+ ++LSYN+I
Sbjct: 157 IGQLKNLQRLHLWNNQLMT-LPEEIGQLKNLQVLELSYNQI 196
>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 405
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N T+L + L +L L+L +NRLK+L ++G L LQ L + NQL
Sbjct: 47 PMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L +NR+T L + L LQ + NQ+T + R E L NL
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR-ESGKLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +NQ+T++ + L L L L NQLT L +I LK L+T++LS N++
Sbjct: 166 QELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT-LFKEIEQLKNLQTLNLSDNQL 221
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L + L +L L+L++N+L +L + G L LQ L + NQL L
Sbjct: 119 LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM--VRRDEFQNLH--- 176
P +I L +L +N++T+L + L LQ N+ NQ+T + + QNLH
Sbjct: 179 PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLN 238
Query: 177 -----------------NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
NL +++L NQ+T+++ + L L L L NQLT L +I
Sbjct: 239 LSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTT-LSKEI 297
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+ LSYN++
Sbjct: 298 EQLKNLQTLSLSYNRL 313
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L+ L L++N+L +L ++G L L L + NQL L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L L ++N++T+L + L LQ ++ +N++ ++ + E L NL +
Sbjct: 271 SIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPK-EIGQLQNLQEL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+L NNQ+T++ + L L L L N+L F +I LK L+T+ L
Sbjct: 330 NLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF-PKEIGQLKNLQTLYL 377
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L ++ L LQ L + N+L+ LP +I L L
Sbjct: 40 LTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
++N++T L + L LQ ++ N++T++ E L NL ++ L +NQ+T++
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTIL-PIEIGKLQNLQTLYLSSNQLTTLPRE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L L LS NQLT L +I L+ L+T++L N++
Sbjct: 159 SGKLENLQELNLSDNQLTT-LPQEIGQLQNLQTLNLKSNQL 198
>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
5410]
Length = 1235
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+LI L L N +T + E ++ +LH+ N L + L LT+L WL ++ N+L
Sbjct: 205 SLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTE 264
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+KL L + NQL+ +P ++ ++L + N++ + + + KL
Sbjct: 265 IPEEIGQLTKLTELSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWL 324
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+D NQ+T V R E L NL + L NQ+T + L +TKL L LS NQL E
Sbjct: 325 RIDQNQLTEVPR-ELSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEV 380
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL++ N LT L L +L L+L+ N+L + + G L+ L L + QN+L
Sbjct: 159 SLTKLYLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTG 218
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P ++ L L+ + N++ + L LT L ++D NQ+T + +E L L
Sbjct: 219 VPQELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEI-PEEIGQLTKLTE 277
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+SL +NQ+ + L L +L LS NQL E
Sbjct: 278 LSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEI 311
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ 130
LT + + LT+L L L+ N+L + ++G L+ L L + NQL +P +I +
Sbjct: 31 KLTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPKEIGKLAN 90
Query: 131 LGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
L L + NR+T + G L LT+L +F NQ+T V + E L NL + L NQ
Sbjct: 91 LTQLRLHQNRLTEVPEEIGQLASLTELSLFQ---NQLTEVPK-EIGQLINLTELYLSQNQ 146
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTE 213
+ + L L L LYLS NQLTE
Sbjct: 147 LMKIPKDLERLISLTKLYLSQNQLTE 172
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LI L L N +T + E + +L + N LT + + L L L L N+L +
Sbjct: 68 LIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQNQLTEV 127
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L L L + QNQL +P D++ L LY + N++T L L L
Sbjct: 128 PKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMELY 187
Query: 159 MDFNQITMVRRD----------------------EFQNLHNLDSISLQNNQITSMNSSLS 196
+ NQ+T V ++ E L +L + L N++ + L
Sbjct: 188 LSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKELG 247
Query: 197 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LT L +L++ NQLTE + ++I L +L + LS+N++ +
Sbjct: 248 KLTNLTWLHIDQNQLTE-IPEEIGQLTKLTELSLSHNQLKEV 288
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N LT + + LT+L L L+ N+L + ++G L+ L L + QN+L +P +
Sbjct: 48 LSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTEVPEE 107
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L L N++T + + L L + NQ+ + +D + L +L + L
Sbjct: 108 IGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKD-LERLISLTKLYLS 166
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
NQ+T L L L LYLS NQLTE
Sbjct: 167 QNQLTEAPKELGKLINLMELYLSQNQLTEV 196
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L + + + L WL ++ N+L + +L L L L + QNQL +P ++ +
Sbjct: 306 NQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRELSQLVNLTRLHLHQNQLTKIPKELGKVT 365
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L + N++ + L L L ++ NQ+T V + E L NL + L N++
Sbjct: 366 KLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLTKVPK-ELGKLTNLTRLHLSYNKLI 424
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ L L L L L NQLT+ + ++ L +L +DLS N +N
Sbjct: 425 EVPKELGKLASLRELDLDQNQLTK-VPKELGKLAKLVILDLSNNSLN 470
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+LH+ N LT + L +T L L L+ N+L + +LG L L L + QNQL +P
Sbjct: 346 RLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLTKVPK 405
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
++ + L L+ + N++ + L L L+ ++D NQ+T V + E L L + L
Sbjct: 406 ELGKLTNLTRLHLSYNKLIEVPKELGKLASLRELDLDQNQLTKVPK-ELGKLAKLVILDL 464
Query: 184 QNNQITSMNSSLSG 197
NN S+N LS
Sbjct: 465 SNN---SLNPELSA 475
>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
Length = 419
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 104/178 (58%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + +N+LTS+ L LT L L L+NN+L SL ++G L+ L+ L + QL +
Sbjct: 98 SLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQLTS 157
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I + L ++ N++TSL + LT L+ + NQ+T V + +Q L +L+
Sbjct: 158 LPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQ-LTSLEE 216
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L++NQ+T++ + + LT L L+LS NQLT +I L L ++L+ N++
Sbjct: 217 LDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSV-PAEIGQLASLTELELNGNQLTSL 273
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
F + ++ L L+ L L L N+L S+ ++G L+ L L + +NQL ++P++I
Sbjct: 14 FGLIGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQL 73
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
+ L L +N++TS+ + LT L ++++N +T V + +Q L +L+ + L NNQ+
Sbjct: 74 TSLTELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQ-LTSLERLILDNNQL 132
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
TS+ + + LT L L L H QLT L +I L LR V L N++
Sbjct: 133 TSLPAEIGQLTSLKELGLHHIQLTS-LPAEIGQLTSLREVHLYGNQLTSL 181
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L +G N L S+ + LT L L L +N+L S+ ++G L+ L L +E N L +
Sbjct: 52 SLTELSLGENQLRSVPAEIGQLTSLTELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTS 111
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P+++ + L L +NN++TSL + LT L+ + Q+T + E L +L
Sbjct: 112 VPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLPA-EIGQLTSLRE 170
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NQ+TS+ + + LT L LYL NQLT ++ L L +DL N++
Sbjct: 171 VHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSV-PAELWQLTSLEELDLKDNQLTNL 227
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL++ N LTS+ L LT L L L +N+L +L ++G L+ L L + NQL +
Sbjct: 190 SLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTS 249
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD---------- 170
+P++I + L L N N++TSL + LT L+ ++ NQ+T + +
Sbjct: 250 VPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEIGQLTSLRLL 309
Query: 171 ------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
E L +L + L NQ+TS+ + + LT L L NQLT L +
Sbjct: 310 SLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTS-LPAE 368
Query: 219 IRGLKRLRTVDLSYN 233
I L LR + L N
Sbjct: 369 IGQLTSLRGLGLECN 383
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +LH+ N LTS+ + L L L LN N+L SL ++G L+ L+ L + NQL +
Sbjct: 236 SLWQLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTS 295
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I + L L +N +TS+ + LT L + NQ+T V E L +L
Sbjct: 296 LPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPA-EIGLLTSLRG 354
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ ++NQ+TS+ + + LT L L L N LT
Sbjct: 355 LGFKDNQLTSLPAEIGQLTSLRGLGLECNLLT 386
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L + N LTSL + LT L L L +N L S+ ++G L+ L L + NQL +
Sbjct: 282 SLKELELNGNQLTSLPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTS 341
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
+P++I L + L L +N++TSL + LT L+ ++ N +T V
Sbjct: 342 VPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSV 388
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTS+ + LT L L L+ N+L S+ ++G L+ L+ L + NQL +LP++I +
Sbjct: 314 NLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLT 373
Query: 130 QLGSLYANNNRITSLDGLLRGL 151
L L N +TS+ +R L
Sbjct: 374 SLRGLGLECNLLTSVPAAIREL 395
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTS+ + LT L L +N+L SL ++G L+ L+ L +E N L +
Sbjct: 328 SLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTS 387
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+P+ I+ G ++ +T +D LR L+
Sbjct: 388 VPAAIRELRAAGCTVGMDDGVT-VDECLRHLSA 419
>gi|427707259|ref|YP_007049636.1| adenylate cyclase [Nostoc sp. PCC 7107]
gi|427359764|gb|AFY42486.1| Adenylate cyclase [Nostoc sp. PCC 7107]
Length = 238
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
+ + + I E A + +L + + L+SL + L++L L+L+NN+L SL ++
Sbjct: 1 MTDEELLQIIEQAAKDKLTELDLSNHQLSSLPPEICQLSNLKVLYLDNNQLSSLPPEICQ 60
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
LS L L + NQL +LP +I S L LY N N+++SL + ++ L NQ+
Sbjct: 61 LSNLTDLFLSDNQLSSLPPEICQLSNLTELYLNGNQLSSLPLEICQISNLMGLYFHNNQL 120
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
+ + + Q L NL ++ L NNQ++S+ S + L+ L LYL+ NQL+ L ++ L
Sbjct: 121 SSLPPEICQ-LSNLTALYLSNNQLSSLPSEICQLSNLTELYLNGNQLSS-LPPELCQLSN 178
Query: 225 LRTVDLSYNKINKFGTR 241
L+ +DLS N+++ +
Sbjct: 179 LKLLDLSNNQLSHLPSE 195
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 8/191 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ PP I + L++ N L+SL + L++L LFL++N+L SL ++ LS L
Sbjct: 30 SLPPEICQLSNLKVLYLDNNQLSSLPPEICQLSNLTDLFLSDNQLSSLPPEICQLSNLTE 89
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL +LP +I S L LY +NN+++SL + L+ L + NQ++ + +
Sbjct: 90 LYLNGNQLSSLPLEICQISNLMGLYFHNNQLSSLPPEICQLSNLTALYLSNNQLSSLPSE 149
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
Q L NL + L NQ++S+ L L+ L L LS+NQL+ L +IR L L + L
Sbjct: 150 ICQ-LSNLTELYLNGNQLSSLPPELCQLSNLKLLDLSNNQLS-HLPSEIRQLSNLTELYL 207
Query: 231 SYNKINKFGTR 241
+ N+++
Sbjct: 208 NGNQLSTLPPE 218
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ PP I +L ++ N L+SL + +++L L+ +NN+L SL ++ LS L
Sbjct: 76 SLPPEICQLSNLTELYLNGNQLSSLPLEICQISNLMGLYFHNNQLSSLPPEICQLSNLTA 135
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL +LPS+I S L LY N N+++SL L L+ L++ ++ NQ++ +
Sbjct: 136 LYLSNNQLSSLPSEICQLSNLTELYLNGNQLSSLPPELCQLSNLKLLDLSNNQLSHLPS- 194
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
E + L NL + L NQ++++ L L+ L L SHN L+
Sbjct: 195 EIRQLSNLTELYLNGNQLSTLPPELCQLSNLTELDFSHNPLS 236
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N L+SL L L++L L L+NN+L L ++ LS L L + NQL L
Sbjct: 156 LTELYLNGNQLSSLPPELCQLSNLKLLDLSNNQLSHLPSEIRQLSNLTELYLNGNQLSTL 215
Query: 122 PSDIQLFSQLGSLYANNNRITS 143
P ++ S L L ++N ++S
Sbjct: 216 PPELCQLSNLTELDFSHNPLSS 237
>gi|45657064|ref|YP_001150.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|421087265|ref|ZP_15548106.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421105036|ref|ZP_15565629.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600301|gb|AAS69787.1| cytoplasmic membrane protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410365346|gb|EKP20741.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430374|gb|EKP74744.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|456987834|gb|EMG23058.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 288
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N +T+L + L +L L LN NRL+++ ++G L KL+ L IE N+L+ L
Sbjct: 75 LKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKKLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L N++ +L + L L+ + NQ+ ++ + E NL L I L N++T
Sbjct: 120 KLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRIHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+I L LY N++T L + L +L ++ NQ ++ Q L
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPSEEKERIQRL 280
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ + + L L +SL+ NQ S
Sbjct: 241 LEENQLTMLPK-QIAALKQLARLSLKGNQFPS 271
>gi|417762633|ref|ZP_12410622.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|409941626|gb|EKN87254.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
Length = 236
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N T+L + L +L L+L +NRLK+L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPEEIGQLKNLQELNLSSNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L +NR+T L + L LQ + NQ+T + R E L NL
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR-ESGKLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +NQ+T++ + L L L L NQLT L +I LK L+T++LS N++
Sbjct: 166 QELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT-LFKEIEQLKNLQTLNLSDNQL 221
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L + L +L L+L++N+L +L + G L LQ L + NQL L
Sbjct: 119 LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
P +I L +L +N++T+L + L LQ N+ NQ+T
Sbjct: 179 PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLT 222
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L L +L L L++N+L +L ++G L LQ L ++ NQL L
Sbjct: 142 LQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTL 201
Query: 122 PSDIQLFSQLGSLYANNNRITSL 144
+I+ L +L ++N++T+L
Sbjct: 202 FKEIEQLKNLQTLNLSDNQLTTL 224
>gi|195349129|ref|XP_002041099.1| GM15368 [Drosophila sechellia]
gi|261277895|sp|B4IBI9.1|SUR8_DROSE RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|194122704|gb|EDW44747.1| GM15368 [Drosophila sechellia]
Length = 683
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q SQL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 225 PESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTML 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 336
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++ FN +T++ + LR L +L L L N+++ L +G L L L + N LE
Sbjct: 256 SLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEH 315
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP DI L +L +N + + + L L M +N+++ V +N ++D
Sbjct: 316 LPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPAT-LKNCKSMDE 374
Query: 181 ISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+++ N IT M +SLSGLT + LS NQ + + +++L +N+I+
Sbjct: 375 FNVEGNGITQLPDGMLASLSGLTTIT---LSRNQFASYPTGGPAQFTNVYSINLEHNRID 431
Query: 237 KF 238
K
Sbjct: 432 KI 433
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I R L + N+LTSL SL+ + L L L +N+L + + L L L
Sbjct: 201 LPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTL 260
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N++ A+ D++ L L N+I L + L L ++ N + + D
Sbjct: 261 YLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPED- 319
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
N NL ++ LQ+N++ + S+ L L L + +N+L+
Sbjct: 320 IGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLS 360
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L +L++L +E+N++E LP
Sbjct: 469 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 528
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 529 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLGNLTHLSV 564
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
N + + + L L LY++ N E L
Sbjct: 565 SENNLQFLPEEIGSLESLENLYINQNPGLEKL 596
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
++ L + ++ + +PS ++ L LY +N+I L + L L+ ++ N +T +
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 224
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ QN L + L++N++ + S + L L LYL N++T + DD+R L L
Sbjct: 225 P-ESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITA-VADDLRQLVNLTM 282
Query: 228 VDLSYNKINKFGT 240
+ L NKI + G+
Sbjct: 283 LSLRENKIRELGS 295
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+S+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 348 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 407
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 408 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 463
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L+RLR +DL N+
Sbjct: 464 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRRLRILDLEENR 522
Query: 235 I 235
I
Sbjct: 523 I 523
>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 428
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N T+L + L +L L+L +NRLK+L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L +NR+T L + L LQ + NQ+T + R E L NL
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR-ESGKLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +NQ+T++ + L L L L NQLT L +I LK L+T++LS N++
Sbjct: 166 QELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT-LFKEIEQLKNLQTLNLSDNQL 221
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L + L +L L+L++N+L +L + G L LQ L + NQL L
Sbjct: 119 LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L LQ N+ NQ+T + E L NL ++
Sbjct: 179 PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL-PIEIGKLQNLHTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +NQ+ + + L L L LS NQLT + +I L+ L T++LS N++
Sbjct: 238 NLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPI-EIGKLQNLHTLNLSGNQL 290
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L+ L L++N+L L ++G L L L + NQL L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + N++T+L + L LQ N+ NQ+T + + E + L NL ++
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSK-EIEQLKNLQTL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
SL N++ + + L L L L +NQLT + +I L+ L+T+ L N++ F
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPI-EIGQLQNLQTLSLYKNRLMTF 385
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L+ NRL L ++G L LQ L + NQL AL
Sbjct: 303 LQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTAL 362
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
P +I L +L NR+ + + L LQ
Sbjct: 363 PIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTL 398
>gi|418677876|ref|ZP_13239150.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400321066|gb|EJO68926.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 285
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L WL L N+L +L ++G L Q LV+ +N+L
Sbjct: 45 PLDVRVLDLSEQKLKTLPKEIGQLQNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L LY N N+ T+ + L LQ N+ NQ+ + +E L NL
Sbjct: 105 TTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTL-PNEIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+ ++ L L L L+ NQLT L ++IR LK LR + LSYN++
Sbjct: 164 RELHLSYNQLKTVPEETGQLKNLQMLSLNANQLTT-LPNEIRQLKNLRELHLSYNQL 219
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 42 TLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG 100
TL+L N +T + E +R+L++ N T+ + L +L L L N+LK+L
Sbjct: 96 TLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPN 155
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
++G L L+ L + NQL+ +P + L L N N++T+L +R L L+ ++
Sbjct: 156 EIGQLKNLRELHLSYNQLKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLS 215
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
+NQ+ + E L NL +SL++NQ+T++
Sbjct: 216 YNQLKTLS-AEIGQLKNLKKLSLRDNQLTTL 245
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I ++L++ N L +L N + L +L L L+ N+LK++ + G L LQ+
Sbjct: 129 AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLKNLRELHLSYNQLKTVPEETGQLKNLQM 188
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL LP++I+ L L+ + N++ +L + L L+ ++ NQ+T + ++
Sbjct: 189 LSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKE 248
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L N +R L +L L L+ N+LK+L ++G L L+ L + NQL L
Sbjct: 186 LQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTL 245
Query: 122 PSDI 125
P +I
Sbjct: 246 PKEI 249
>gi|261277896|sp|B4QVR7.2|SUR8_DROSI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
Length = 680
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q SQL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 222 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTML 280
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 333
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N+++ L +G L L L
Sbjct: 244 IPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 303
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L M +N+++ V
Sbjct: 304 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPAT- 362
Query: 172 FQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+N ++D +++ N IT M +SLSGLT + LS NQ + + +
Sbjct: 363 LKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTIT---LSRNQFASYPTGGPAQFTNVYS 419
Query: 228 VDLSYNKINKF 238
++L +N+I+K
Sbjct: 420 INLEHNRIDKI 430
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I R L + N+LTSL SL+ + L L L +N+L + + L L L
Sbjct: 198 LPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTL 257
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N++ A+ D++ L L N+I L + L L ++ N + + D
Sbjct: 258 YLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPED- 316
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
N NL ++ LQ+N++ + S+ L L L + +N+L+
Sbjct: 317 IGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLS 357
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 24/146 (16%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L +L++L +E+N++E LP
Sbjct: 466 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 525
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 526 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLGNLTHLSV 561
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHN 209
N + + + L L LY++ N
Sbjct: 562 SENNLQFLPEEIGSLESLENLYINQN 587
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+++ L + ++ + +PS ++ L LY +N+I L + L L+ ++ N +T
Sbjct: 160 CRIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLT 219
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ + QN L + L++N++ + + L L LYL N++T + DD+R L L
Sbjct: 220 SL-PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-VADDLRQLVNL 277
Query: 226 RTVDLSYNKINKFGT 240
+ L NKI + G+
Sbjct: 278 TMLSLRENKIRELGS 292
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+S+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 345 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 404
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 405 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 460
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L+RLR +DL N+
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRRLRILDLEENR 519
Query: 235 I 235
I
Sbjct: 520 I 520
>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 473
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 2/168 (1%)
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
G N LT+L + L +L L LN+N+ +L ++G L KLQ L + NQL LP +I
Sbjct: 150 GGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQ 209
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
L L N+N++T+L + L LQ ++ NQ+T + +E NL NL ++ L+ NQ
Sbjct: 210 LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTL-PEEIGNLQNLQTLDLEGNQ 268
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++ + L L L L NQL L ++I L+ L+T+DL N++
Sbjct: 269 LAALPEEIGNLQNLQTLDLEGNQLAT-LPEEIGNLQNLQTLDLEGNQL 315
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L +L + L +L L L N+L +L ++G L LQ L +E NQL L
Sbjct: 259 LQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTL 318
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY NNR+T+L + L KLQ ++D NQ+ + + E ++L NL +
Sbjct: 319 PKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPK-EIEDLQNLKIL 377
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL +NQ+T++ + L L L L NQLT L +I L+ L+ +DL N++
Sbjct: 378 SLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTT-LPKEIGKLQNLKMLDLHGNQL 430
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 28/251 (11%)
Query: 11 HAVALNLIDLEPETGSHPLTS--DDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHV 67
H + ++DL P G + LT+ ++ L TL L +N T + E ++KL +
Sbjct: 136 HPTDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDL 195
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N LT+L + L +L L LN+N+L +L ++G L LQ L + +NQL LP +I
Sbjct: 196 SHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGN 255
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ--- 184
L +L N++ +L + L LQ +++ NQ+ + +E NL NL ++ L+
Sbjct: 256 LQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATL-PEEIGNLQNLQTLDLEGNQ 314
Query: 185 --------------------NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
NN++T++ + L KL +L L HNQL + L +I L+
Sbjct: 315 LTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQL-KTLPKEIEDLQN 373
Query: 225 LRTVDLSYNKI 235
L+ + L N++
Sbjct: 374 LKILSLGSNQL 384
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L L WL L++N+LK+L ++ L L++L + NQL LP ++
Sbjct: 336 NRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQ 395
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L + N++T+L + L L++ ++ NQ+ M E L NL ++L N
Sbjct: 396 NLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQL-MTLPKEIGKLQNLKELNLVGN--P 452
Query: 190 SMNSSLSGLTKL 201
S+ S + KL
Sbjct: 453 SLRSQKEKIQKL 464
>gi|220907479|ref|YP_002482790.1| hypothetical protein Cyan7425_2066 [Cyanothece sp. PCC 7425]
gi|219864090|gb|ACL44429.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
Length = 508
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + LT L L L +N L +L + +L++L++L + +NQL L
Sbjct: 43 LQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLTNL 102
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I +QL L +NN TSL ++ L +LQV + N++T + E L +L +
Sbjct: 103 PEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPA-EIGCLVHLKEL 161
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NN T + +++ L +L L LS N T+ L + I GL L +DLSYNK+
Sbjct: 162 DLSNNAFTDLPVAIANLNQLQTLDLSRNHFTD-LPEAINGLAHLCKLDLSYNKLTAI 217
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 30/206 (14%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L+ L S+ LT L L++ N+L +L +G LS LQ + +NQL L
Sbjct: 273 LKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPESIGGLSNLQTFHLYRNQLTIL 332
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT------MVRRDEFQNL 175
P I QL L+A N++T+L G +R LT+L+ N+ NQ+ V + +L
Sbjct: 333 PESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSL 392
Query: 176 HNLDSISLQNNQITS-----------------------MNSSLSGLTKLAYLYLSHNQLT 212
L ++L +NQI + +S+ LT+L +LY+SHN LT
Sbjct: 393 LQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLTQLQFLYVSHNPLT 452
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINKF 238
L + I GL +L+ ++L +N ++
Sbjct: 453 H-LPETINGLSQLQKLNLEHNHLSDL 477
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 7/183 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N +T L + +L L L+ N L +L +G+L+ L++L + QNQL L
Sbjct: 227 LQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHL 286
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I +QL LY N++ +L + GL+ LQ F++ NQ+T++ + +L L +
Sbjct: 287 PKSIGYLTQLQKLYIERNKLITLPESIGGLSNLQTFHLYRNQLTIL-PESIGDLIQLREL 345
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF------LLDDIRGLKRLRTVDLSYNKI 235
NQ+T++ ++ LT+L L LS NQL L + + L +L ++LS+N+I
Sbjct: 346 FAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSHNQI 405
Query: 236 NKF 238
+
Sbjct: 406 AQL 408
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 45 LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L+ N +T++ E T ++KL + N+ TSL + L L L L+ N+L L ++G
Sbjct: 94 LIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAEIG 153
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L L+ L + N LP I +QL +L + N T L + GL L ++ +N+
Sbjct: 154 CLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNK 213
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+T + +L L ++ L NQIT + + +L L LS N L L I L
Sbjct: 214 LTAIPA-VISSLSQLQTLDLCANQITELPELIGSCIELQELSLSRNLLIN-LSAAIGSLT 271
Query: 224 RLRTVDLSYNKINKF 238
L+ +DLS N+++
Sbjct: 272 NLKVLDLSQNQLSHL 286
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L L N L L +GTL++LQ L + N L LP +I +QL L +N +++L
Sbjct: 23 LTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLG 82
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ LT+L+V ++ NQ+T + + L L + L NN TS+ + L +L L L
Sbjct: 83 ICSLTQLEVLDLIENQLTNL-PEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLH 141
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+LT+ L +I L L+ +DLS N
Sbjct: 142 ANKLTK-LPAEIGCLVHLKELDLSNNA 167
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N + L ++ LT L L L N LK L +G+L++LQ L + N L LP
Sbjct: 398 LNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLTQLQFLYVSHNPLTHLPET 457
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
I SQL L +N ++ L + LT L+ + N+ T++
Sbjct: 458 INGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSENKFTVL 500
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N+L L S+ LT L +L++++N L L + LS+LQ L +E N L L
Sbjct: 418 LKELVLVCNHLKDLPASIGSLTQLQFLYVSHNPLTHLPETINGLSQLQKLNLEHNHLSDL 477
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
P+ I + L L + N+ T L + LT
Sbjct: 478 PAAIAALTLLKELILSENKFTVLPTAIGALT 508
>gi|328708332|ref|XP_003243660.1| PREDICTED: leucine-rich repeat-containing protein 4B-like
[Acyrthosiphon pisum]
Length = 597
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 5/200 (2%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE 99
L L L NNI I A + L + +N + + SL LT+L L L+NN + L+
Sbjct: 132 LAILYLYRNNIMDIKSLAHLTKLETLDLSYNEIMDIE-SLAHLTELETLDLSNNNISELK 190
Query: 100 -GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDG-LLRGLTKLQV 156
G LSKLQ L + N++E + + + + L SL ++N I +LD + +GLT+L+
Sbjct: 191 HGAFANLSKLQSLFLYTNKIENIETGVFNNLTSLESLSLHDNSIHNLDSEIFKGLTRLEK 250
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFL 215
+ N IT V+ F NL L + LQNN+I+ + S + LTKL L LS+N ++E
Sbjct: 251 LTLSNNNITEVKNRVFSNLPKLQILDLQNNKISGIERESFTYLTKLETLILSNNNISEVQ 310
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
+L+++DLSYN I
Sbjct: 311 NGAFANFSKLQSLDLSYNFI 330
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 111/200 (55%), Gaps = 5/200 (2%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
PA TL+L+NN I+ I A+ ++ L++ N + + SL LT L L+L N +
Sbjct: 86 PATKTLILINNEISDIESLAYLRELQFLNLDNNKIRDIE-SLANLTQLAILYLYRNNIMD 144
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQV 156
++ L L+KL+ L + N++ + S L ++L +L +NN I+ L G L+KLQ
Sbjct: 145 IKS-LAHLTKLETLDLSYNEIMDIESLAHL-TELETLDLSNNNISELKHGAFANLSKLQS 202
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFL 215
+ N+I + F NL +L+S+SL +N I +++S + GLT+L L LS+N +TE
Sbjct: 203 LFLYTNKIENIETGVFNNLTSLESLSLHDNSIHNLDSEIFKGLTRLEKLTLSNNNITEVK 262
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
L +L+ +DL NKI
Sbjct: 263 NRVFSNLPKLQILDLQNNKI 282
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 27 HPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLN 86
H L S+ KG L L L NNNIT + F L L
Sbjct: 235 HNLDSEIFKGLTRLEKLTLSNNNITEVKNRVF---------------------SNLPKLQ 273
Query: 87 WLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSL 144
L L NN++ +E + T L+KL+ L++ N + E FS+L SL + N I +
Sbjct: 274 ILDLQNNKISGIERESFTYLTKLETLILSNNNISEVQNGAFANFSKLQSLDLSYNFIMDI 333
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 203
+ L LT+L+ N+ N I+ V+ F NL L ++ L N+I ++ + + + LT L
Sbjct: 334 ESL-SHLTELETLNLSNNNISEVKNGAFTNLWKLQALFLSGNKIDNIETGAFNNLTSLRA 392
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+L +N + + LD +GLK+L + L +N I
Sbjct: 393 LFLDYNNIHKIDLDMFKGLKKLNRLFLDHNMI 424
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 33/230 (14%)
Query: 40 LITLLLVNNNITHIHENAFPP------------TIRKLHVG-FNNLTSL------NNSL- 79
L TL L NNNI+ + AF I + G FNNLTSL +NS+
Sbjct: 176 LETLDLSNNNISELKHGAFANLSKLQSLFLYTNKIENIETGVFNNLTSLESLSLHDNSIH 235
Query: 80 -------RGLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSD-IQLFSQ 130
+GLT L L L+NN + ++ ++ L KLQ+L ++ N++ + + ++
Sbjct: 236 NLDSEIFKGLTRLEKLTLSNNNITEVKNRVFSNLPKLQILDLQNNKISGIERESFTYLTK 295
Query: 131 LGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L +L +NN I+ + +G +KLQ ++ +N I + + +L L++++L NN I+
Sbjct: 296 LETLILSNNNISEVQNGAFANFSKLQSLDLSYNFIMDI--ESLSHLTELETLNLSNNNIS 353
Query: 190 SM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ N + + L KL L+LS N++ L LR + L YN I+K
Sbjct: 354 EVKNGAFTNLWKLQALFLSGNKIDNIETGAFNNLTSLRALFLDYNNIHKI 403
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
L TL+L NNNI+ + AF ++ L + +N + + SL LT+L L L+NN +
Sbjct: 296 LETLILSNNNISEVQNGAFANFSKLQSLDLSYNFIMDIE-SLSHLTELETLNLSNNNISE 354
Query: 98 LE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKL 154
++ G L KLQ L + N+++ + + + L +L+ + N I +D + +GL KL
Sbjct: 355 VKNGAFTNLWKLQALFLSGNKIDNIETGAFNNLTSLRALFLDYNNIHKIDLDMFKGLKKL 414
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+D N I + F +L +L + L NN +T
Sbjct: 415 NRLFLDHNMIRNIPPGTFDSLASLSVLQLDNNPLTC 450
>gi|271962539|ref|YP_003336735.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270505714|gb|ACZ83992.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 354
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R LH+ N LT S+ L +L LFL N + L +G L L+ L + N L +
Sbjct: 69 ALRALHLDGNALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAVGGNALTS 128
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL-D 179
+P+ + + L SL N IT + + LT+L++ ++ N +T + + +L NL D
Sbjct: 129 VPAGLWRLTGLASLNLAENSITEVPETIGRLTELRMLDLGHNALTRI-PEAIGDLSNLTD 187
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L +N+ TS+ +SL GLT+L YL L+ N+LT+ L I GL LR + L N++ +
Sbjct: 188 YLYLSDNRFTSVPASLGGLTRLTYLNLTDNRLTD-LPAAIGGLTALRELRLYGNRLREI 245
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 113/205 (55%), Gaps = 14/205 (6%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDL-NWLFLNNNRLK 96
L +L L N+IT + E T +R L +G N LT + ++ L++L ++L+L++NR
Sbjct: 138 GLASLNLAENSITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNRFT 197
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTK 153
S+ LG L++L L + N+L LP+ I + L L NR+ + G LR L +
Sbjct: 198 SVPASLGGLTRLTYLNLTDNRLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLRELRE 257
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L + N N +T + +L L + L+NN ITS+ SL+GL++L +L L +N+L E
Sbjct: 258 LHLMN---NALTCL-PASVGDLSGLRLLDLRNNAITSLPGSLTGLSRLTHLDLRNNRLRE 313
Query: 214 FL--LDDIRGLKRLRTVDLSYNKIN 236
L D+ L++L DL +NK++
Sbjct: 314 IPGGLADLPALEKL---DLRWNKLD 335
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
DL W N L L +G L +L+ L ++ N+L LP D+ + L +L+ + N +T
Sbjct: 29 DLAW-----NALTELPEWVGRLPRLEDLRLDGNRLRDLP-DLHGLTALRALHLDGNALTR 82
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ L +L+ + N I + + L L +++ N +TS+ + L LT LA
Sbjct: 83 FPESVLRLPELRTLFLYGNAIGEL-PEGIGLLRGLRHLAVGGNALTSVPAGLWRLTGLAS 141
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L+ N +TE + + I L LR +DL +N + +
Sbjct: 142 LNLAENSITE-VPETIGRLTELRMLDLGHNALTRI 175
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 34 LKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
+ G AL L L N + I E +R+LH+ N LT L S+ L+ L L L N
Sbjct: 226 IGGLTALRELRLYGNRLREIPETIGRLRELRELHLMNNALTCLPASVGDLSGLRLLDLRN 285
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
N + SL G L LS+L L + N+L +P + L L N++ D
Sbjct: 286 NAITSLPGSLTGLSRLTHLDLRNNRLREIPGGLADLPALEKLDLRWNKLDDGD 338
>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 515
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N L +L + L +L L L N+L +L ++G L LQ L +E NQL L
Sbjct: 160 LQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTL 219
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T+ + L L++ ++ NQ+T + + E L NL +
Sbjct: 220 PKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKILSLGNNQLTTLPK-EVGKLQNLQEM 278
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ+T++ + L L LYL+HNQLT L +I L+ L+ + L N++
Sbjct: 279 KSSKNQLTTLPKEIGNLQNLQELYLAHNQLTA-LPKEIGNLQNLQQLYLYGNQL 331
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++ N LT+L + L +L L+L +N+L +L ++G L LQ L + NQL L
Sbjct: 275 LQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTL 334
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ NN++T+ + L KL+ ++ NQ+T + + E NL NL +
Sbjct: 335 PIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPK-EIGNLQNLKEL 393
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +NQ+T++ + L L L L++NQLT L +I L+ L+ +DL+ N++
Sbjct: 394 NLSSNQLTTIPKEIENLQNLQVLDLNNNQLTA-LPKEIGNLQNLKELDLTSNRL 446
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+ + L +L L L NN+L +L ++G L LQ + +NQL L
Sbjct: 229 LKKLYLYNNRLTTFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTL 288
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T+L + L LQ + NQ+T + E NL NL +
Sbjct: 289 PKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTL-PIEIGNLQNLQGL 347
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NN++T+ + L KL +L L+ NQLT + +I L+ L+ ++LS N++
Sbjct: 348 HLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTT-IPKEIGNLQNLKELNLSSNQL 400
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 96/167 (57%), Gaps = 3/167 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L L NN+L + ++G L KL+ L + +NQL +
Sbjct: 321 LQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTI 380
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L ++N++T++ + L LQV +++ NQ+T + + E NL NL +
Sbjct: 381 PKEIGNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQLTALPK-EIGNLQNLKEL 439
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL--LDDIRGLKRLR 226
L +N++T++ + L L L LS+N LT F + ++ LKRLR
Sbjct: 440 DLTSNRLTTLPKEIGNLQSLESLDLSNNPLTSFPEEIGKLQHLKRLR 486
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+G N LT+ + L L WL LN N+L ++ ++G L L+ L + NQL +
Sbjct: 344 LQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTI 403
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L NNN++T+L + L L+ ++ N++T + + E NL +L+S+
Sbjct: 404 PKEIENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPK-EIGNLQSLESL 462
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSH 208
L NN +TS + L L L L +
Sbjct: 463 DLSNNPLTSFPEEIGKLQHLKRLRLEN 489
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L +L + L L L L NRL +L ++G L LQ L +E NQL L
Sbjct: 137 LRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLATL 196
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I L +L N++T+L G L+ L KL ++N N++T + E ++L NL
Sbjct: 197 PEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYN---NRLTTFPK-EIEDLQNL 252
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL NNQ+T++ + L L + S NQLT L +I L+ L+ + L++N++
Sbjct: 253 KILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTT-LPKEIGNLQNLQELYLAHNQL 308
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 57 AFPPTIRKLHVG-FNNLTSLNNSLRGLTDLNWLFL-------NNNRLKSLEGQLGTLSKL 108
F TI G + NLT + + TD+ +L+L +N+ L +L ++G L L
Sbjct: 81 CFCCTIEAKEKGVYYNLTE---AFQHPTDVQYLYLGPRERKHSNDPLWTLPKEIGKLQNL 137
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L + NQL LP +I +L L NR+ +L + L LQ +++ NQ+ +
Sbjct: 138 RDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLATL- 196
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+E NL NL ++ L+ NQ+T++ + L L LYL +N+LT F +I L+ L+ +
Sbjct: 197 PEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTF-PKEIEDLQNLKIL 255
Query: 229 DLSYNKI 235
L N++
Sbjct: 256 SLGNNQL 262
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L L++N+L +L ++G L KLQ L + +N+L LP +I L
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNL 183
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L N++ +L + L LQ +++ NQ+T + + E L NL + L NN++T+
Sbjct: 184 QELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPK-EIGKLQNLKKLYLYNNRLTTF 242
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L +NQLT L ++ L+ L+ + S N++
Sbjct: 243 PKEIEDLQNLKILSLGNNQLTT-LPKEVGKLQNLQEMKSSKNQL 285
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT++ + L +L L LNNN+L +L ++G L L+ L + N+L L
Sbjct: 390 LKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTL 449
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNM 159
P +I L SL +NN +TS G L+ L +L++ N+
Sbjct: 450 PKEIGNLQSLESLDLSNNPLTSFPEEIGKLQHLKRLRLENI 490
>gi|189235399|ref|XP_001811183.1| PREDICTED: similar to CG5195 CG5195-PA [Tribolium castaneum]
Length = 545
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 118/214 (55%), Gaps = 9/214 (4%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
LK ++ + + NN +T I EN F P +R L++ N S+ + L L L L+LN
Sbjct: 173 LKNLKSVEEVYMNNNQLTQIEENDFEPLQKLRILNLAHNFQVSIKSPLFFL-HLQELYLN 231
Query: 92 NNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLR 149
NNRLKS+ Q L L++L I N E + SD LF QL + NN+I +L+G +L
Sbjct: 232 NNRLKSINAQEFVRLPSLRILKIGNNLFETI-SDNHLFEQLEEFHGENNQIKALNGHILN 290
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
L L++ N+ N + + D F + + + L +N++ ++ + + +++L L +
Sbjct: 291 KLENLKMVNLSNNALKNIEGDTFATSNRIKVVDLSSNKLAKIDPRNFRNMNNVSFLNLHN 350
Query: 209 NQLTEFLL--DDIRGLKRLRTVDLSYNKINKFGT 240
N LT+ ++ D+++ L +L +DLSYN+I++ T
Sbjct: 351 NSLTQEVISCDNLQNLMQLNVLDLSYNEISEIYT 384
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 35 KGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
K + TL N I + + A ++R + + FN L + L+ L + +++NN
Sbjct: 127 KHAEKITTLNASYNKIDELKDEALADLKSLRVVDLSFNRLAQIGTGLKNLKSVEEVYMNN 186
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG--LLR 149
N+L + E L KL++L + N ++ S + F L LY NNNR+ S++ +R
Sbjct: 187 NQLTQIEENDFEPLQKLRILNLAHNFQVSIKSPL-FFLHLQELYLNNNRLKSINAQEFVR 245
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSH 208
L L++ + N + + L+ +NNQI ++N L+ L L + LS+
Sbjct: 246 -LPSLRILKIGNNLFETISDNHL--FEQLEEFHGENNQIKALNGHILNKLENLKMVNLSN 302
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
N L D R++ VDLS NK+ K RN
Sbjct: 303 NALKNIEGDTFATSNRIKVVDLSSNKLAKIDPRN 336
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLK 96
P+L L + NN I +N + + H N + +LN L L +L + L+NN LK
Sbjct: 247 PSLRILKIGNNLFETISDNHLFEQLEEFHGENNQIKALNGHILNKLENLKMVNLSNNALK 306
Query: 97 SLEGQ-LGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRIT----SLDGLLRG 150
++EG T ++++++ + N+L + P + + + + L +NN +T S D L +
Sbjct: 307 NIEGDTFATSNRIKVVDLSSNKLAKIDPRNFRNMNNVSFLNLHNNSLTQEVISCDNL-QN 365
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHN 209
L +L V ++ +N+I+ + F+ L L +SL N + ++ S+ L L L L+HN
Sbjct: 366 LMQLNVLDLSYNEISEIYTCTFRKLEKLQKLSLLANHLKTIPPSAFQTLHNLQELNLAHN 425
Query: 210 QLTE 213
QLTE
Sbjct: 426 QLTE 429
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
F+ NL + L +NQ+ S+N S K+ L S+N++ E + + LK LR VDLS
Sbjct: 105 FEKYPNLVHLDLSDNQV-SLNFSKHA-EKITTLNASYNKIDELKDEALADLKSLRVVDLS 162
Query: 232 YNKINKFGT 240
+N++ + GT
Sbjct: 163 FNRLAQIGT 171
>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 405
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N T+L + L +L L+L +NRLK+L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L +NR+T L + L LQ + NQ+T + R E L NL
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR-ESGKLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +NQ+T++ + L L L L NQLT L +I LK L+T++LS N++
Sbjct: 166 QELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT-LFKEIEQLKNLQTLNLSDNQL 221
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L + L +L L+L++N+L +L + G L LQ L + NQL L
Sbjct: 119 LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM--VRRDEFQNLH--- 176
P +I L +L +N++T+L + L LQ N+ NQ+T + + QNLH
Sbjct: 179 PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLN 238
Query: 177 -----------------NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
NL +++L NQ+T+++ + L L L L NQLT L +I
Sbjct: 239 LSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTT-LSKEI 297
Query: 220 RGLKRLRTVDLSYNKI 235
LK L+T+ LSYN++
Sbjct: 298 EQLKNLQTLSLSYNRL 313
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L+ L L++N+L +L ++G L L L + NQL L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L L ++N++T+L + L LQ ++ +N++ ++ + E L NL +
Sbjct: 271 SIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPK-EIGQLQNLQEL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+L NNQ+T++ + L L L L N+L F +I LK L+T+ L
Sbjct: 330 NLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF-PKEIGQLKNLQTLYL 377
>gi|24215148|ref|NP_712629.1| hypothetical protein LA_2448 [Leptospira interrogans serovar Lai
str. 56601]
gi|386074467|ref|YP_005988784.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
gi|417776841|ref|ZP_12424673.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418672944|ref|ZP_13234274.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|24196218|gb|AAN49647.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
56601]
gi|353458256|gb|AER02801.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
gi|410573337|gb|EKQ36387.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410580051|gb|EKQ47882.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 428
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N T+L + L +L L+L +NRLK+L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L +NR+T L + L LQ + NQ+T + R E L NL
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR-ESGKLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +NQ+T++ + L L L L NQLT L +I LK L+T++LS N++
Sbjct: 166 QELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT-LFKEIEQLKNLQTLNLSDNQL 221
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L + L +L L+L++N+L +L + G L LQ L + NQL L
Sbjct: 119 LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L LQ N+ NQ+T + E L NL ++
Sbjct: 179 PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPI-EIGKLQNLHTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +NQ+T++ + L L L LS NQLT + +I L+ L T++LS N++
Sbjct: 238 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPI-EIGKLQNLHTLNLSGNQL 290
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L+ L L++N+L +L ++G L L L + NQL L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + N++T+L + L LQ N+ NQ+T + + E + L NL ++
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSK-EIEQLKNLQTL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
SL N++ + + L L L L +NQLT + +I L+ L+T+ L N++ F
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPI-EIGQLQNLQTLSLYKNRLMTF 385
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L+ NRL L ++G L LQ L + NQL AL
Sbjct: 303 LQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTAL 362
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
P +I L +L NR+ + + L LQ
Sbjct: 363 PIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTL 398
>gi|221379722|ref|NP_732231.2| Sur-8, isoform A [Drosophila melanogaster]
gi|221379725|ref|NP_650620.3| Sur-8, isoform B [Drosophila melanogaster]
gi|442619579|ref|NP_001262664.1| Sur-8, isoform F [Drosophila melanogaster]
gi|261277919|sp|Q9VEK6.3|SUR8_DROME RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|21711803|gb|AAM75092.1| RH55123p [Drosophila melanogaster]
gi|220903112|gb|AAF55415.3| Sur-8, isoform A [Drosophila melanogaster]
gi|220903113|gb|AAN13743.2| Sur-8, isoform B [Drosophila melanogaster]
gi|440217531|gb|AGB96044.1| Sur-8, isoform F [Drosophila melanogaster]
Length = 641
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q SQL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 222 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTML 280
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 333
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N+++ L +G L L L
Sbjct: 244 IPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 303
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L M +N+++ V
Sbjct: 304 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPAT- 362
Query: 172 FQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+N ++D +++ N IT M +SLSGLT + LS NQ + + +
Sbjct: 363 LKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTIT---LSRNQFASYPTGGPAQFTNVYS 419
Query: 228 VDLSYNKINKF 238
++L +N+I+K
Sbjct: 420 INLEHNRIDKI 430
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L KL++L +E+N++E LP
Sbjct: 466 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 525
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 526 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLGNLTHLSV 561
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
N + + + L L LY++ N E L
Sbjct: 562 SENNLQFLPEEIGSLESLENLYINQNPGLEKL 593
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I R L + N+LTSL SL+ + L L L +N+L + + L L L
Sbjct: 198 LPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTL 257
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N++ A+ D++ L L N+I L + L L ++ N + + D
Sbjct: 258 YLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPED- 316
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
N NL ++ LQ+N++ + S+ L L L + +N+L+
Sbjct: 317 IGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLS 357
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
++ L + ++ + +PS ++ L LY +N+I L + L L+ ++ N +T +
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ QN L + L++N++ + + L L LYL N++T + DD+R L L
Sbjct: 222 P-ESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-VADDLRQLVNLTM 279
Query: 228 VDLSYNKINKFGT 240
+ L NKI + G+
Sbjct: 280 LSLRENKIRELGS 292
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+S+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 345 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 404
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 405 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 460
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L++LR +DL N+
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRKLRILDLEENR 519
Query: 235 I 235
I
Sbjct: 520 I 520
>gi|194900450|ref|XP_001979770.1| GG16778 [Drosophila erecta]
gi|261277885|sp|B3P3E8.1|SUR8_DROER RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|190651473|gb|EDV48728.1| GG16778 [Drosophila erecta]
Length = 644
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q SQL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 225 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTML 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 336
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N+++ L +G L L L
Sbjct: 247 IPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 306
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L M +N++ V
Sbjct: 307 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLNSVPAT- 365
Query: 172 FQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+N ++D +++ N IT M +SLSGLT + LS NQ + + +
Sbjct: 366 LKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTIT---LSRNQFASYPTGGPAQFTNVYS 422
Query: 228 VDLSYNKINKF 238
++L +N+I+K
Sbjct: 423 INLEHNRIDKI 433
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I R L + N+LTSL SL+ + L L L +N+L + + L L L
Sbjct: 201 LPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTL 260
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N++ A+ D++ L L N+I L + L L ++ N + + D
Sbjct: 261 YLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPED- 319
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
N NL ++ LQ+N++ + S+ L L L + +N+L
Sbjct: 320 IGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRL 359
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L +L++L +E+N++E LP
Sbjct: 469 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 528
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 529 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLGNLTHLSV 564
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
N + + + L L LY++ N E L
Sbjct: 565 SENNLQFLPEEIGSLESLENLYINQNPGLEKL 596
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L S+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 348 SLVRLGMRYNRLNSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 407
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 408 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 463
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L+RLR +DL N+
Sbjct: 464 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRRLRILDLEENR 522
Query: 235 I 235
I
Sbjct: 523 I 523
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
++ L + ++ + +PS ++ L LY +N+I L + L L+ ++ N +T +
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 224
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ QN L + L++N++ + + L L LYL N++T + DD+R L L
Sbjct: 225 P-ESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-VADDLRQLVNLTM 282
Query: 228 VDLSYNKINKFGT 240
+ L NKI + G+
Sbjct: 283 LSLRENKIRELGS 295
>gi|195501949|ref|XP_002098015.1| GE24170 [Drosophila yakuba]
gi|261277890|sp|B4PU77.1|SUR8_DROYA RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|194184116|gb|EDW97727.1| GE24170 [Drosophila yakuba]
Length = 645
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 166 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q SQL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 226 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTML 284
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 285 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 337
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N+++ L +G L L L
Sbjct: 248 IPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 307
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L M +N+++ V
Sbjct: 308 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPAT- 366
Query: 172 FQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+N ++D +++ N IT M +SLSGLT + LS NQ + + +
Sbjct: 367 LKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTIT---LSRNQFASYPTGGPAQFTNVYS 423
Query: 228 VDLSYNKINKF 238
++L +N+I+K
Sbjct: 424 INLEHNRIDKI 434
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I R L + N+LTSL SL+ + L L L +N+L + + L L L
Sbjct: 202 LPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTL 261
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N++ A+ D++ L L N+I L + L L ++ N + + D
Sbjct: 262 YLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPED- 320
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
N NL ++ LQ+N++ + S+ L L L + +N+L+
Sbjct: 321 IGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSV 363
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L +L++L +E+N++E LP
Sbjct: 470 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 529
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 530 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLGNLTHLSV 565
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
N + + + L L LY++ N E L
Sbjct: 566 SENNLQFLPEEIGSLESLENLYINQNPGLEKL 597
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+S+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 349 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 408
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 409 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 464
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L+RLR +DL N+
Sbjct: 465 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRRLRILDLEENR 523
Query: 235 I 235
I
Sbjct: 524 I 524
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
++ L + ++ + +PS ++ L LY +N+I L + L L+ ++ N +T +
Sbjct: 166 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 225
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ QN L + L++N++ + + L L LYL N++T + DD+R L L
Sbjct: 226 P-ESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-VADDLRQLVNLTM 283
Query: 228 VDLSYNKINKFGT 240
+ L NKI + G+
Sbjct: 284 LSLRENKIRELGS 296
>gi|442619581|ref|NP_001262665.1| Sur-8, isoform E [Drosophila melanogaster]
gi|440217532|gb|AGB96045.1| Sur-8, isoform E [Drosophila melanogaster]
Length = 694
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q SQL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 222 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTML 280
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 333
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N+++ L +G L L L
Sbjct: 244 IPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 303
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L M +N+++ V
Sbjct: 304 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPAT- 362
Query: 172 FQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+N ++D +++ N IT M +SLSGLT + LS NQ + + +
Sbjct: 363 LKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTIT---LSRNQFASYPTGGPAQFTNVYS 419
Query: 228 VDLSYNKINKF 238
++L +N+I+K
Sbjct: 420 INLEHNRIDKI 430
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L KL++L +E+N++E LP
Sbjct: 466 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 525
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 526 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLGNLTHLSV 561
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
N + + + L L LY++ N E L
Sbjct: 562 SENNLQFLPEEIGSLESLENLYINQNPGLEKL 593
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I R L + N+LTSL SL+ + L L L +N+L + + L L L
Sbjct: 198 LPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTL 257
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N++ A+ D++ L L N+I L + L L ++ N + + D
Sbjct: 258 YLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPED- 316
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
N NL ++ LQ+N++ + S+ L L L + +N+L+
Sbjct: 317 IGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLS 357
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
++ L + ++ + +PS ++ L LY +N+I L + L L+ ++ N +T +
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ QN L + L++N++ + + L L LYL N++T + DD+R L L
Sbjct: 222 P-ESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-VADDLRQLVNLTM 279
Query: 228 VDLSYNKINKFGT 240
+ L NKI + G+
Sbjct: 280 LSLRENKIRELGS 292
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+S+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 345 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 404
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 405 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 460
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L++LR +DL N+
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRKLRILDLEENR 519
Query: 235 I 235
I
Sbjct: 520 I 520
>gi|410920159|ref|XP_003973551.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Takifugu rubripes]
Length = 1002
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 40 LITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLK 96
+++L L +N I I + P ++ L + N++T L S + L+LNNN++
Sbjct: 112 IVSLYLHHNKIRTIEGSRIAPLVSVETLDLSNNDITELRGYSFPAGLQIKDLYLNNNKIG 171
Query: 97 SLEGQLGTL----SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGL 151
+LE LG L S LQ+L + +N++ +P +L L N NRI ++GL +GL
Sbjct: 172 ALE--LGALDHLGSTLQVLRLSRNRISQIPVRAFQLPRLTLLELNRNRIRQVEGLTFQGL 229
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQ 210
+ L+V + N I+ + F +L + ++ L N +T +NS SL GLT L L+LS+N
Sbjct: 230 SSLEVLKLQRNSISKLTDGAFWDLAKMKALHLDYNNLTEVNSGSLYGLTSLQQLFLSNNS 289
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ D + ++LR ++LSYN + +
Sbjct: 290 IARINPDGWKFCQKLRELNLSYNNLTRL 317
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFL 90
+G +L L L N+I+ + + AF ++ LH+ +NNLT +N+ SL GLT L LFL
Sbjct: 226 FQGLSSLEVLKLQRNSISKLTDGAFWDLAKMKALHLDYNNLTEVNSGSLYGLTSLQQLFL 285
Query: 91 NNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSL-D 145
+NN + + KL+ L + N L L D S LG L+ +N I+ + +
Sbjct: 286 SNNSIARINPDGWKFCQKLRELNLSYNNLTRL--DEGSLSVLGDLHTLRLGHNAISHITE 343
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRD---EFQNLHNLDSISLQNNQITSM-NSSLSGLTKL 201
G RGL L+V +D N I+ D F L +L+ + L N+I S+ ++ GL L
Sbjct: 344 GAFRGLKALRVLELDHNDISGTIEDTNGAFSGLDSLNKLILFGNKIKSVAENAFLGLESL 403
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+L L N + D +K L+++
Sbjct: 404 EHLNLGGNAVRSIQPDAFSKMKNLKSL 430
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
Query: 88 LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L++N+L +++ + L L L+ L ++ N L ++P Q S++ SLY ++N+I +++G
Sbjct: 68 LTLSHNKLTTIDVEALDNLPNLRELRLDHNVLTSIPHLGQAASKIVSLYLHHNKIRTIEG 127
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGL-TKLAY 203
+ L ++ ++ N IT +R F + + L NN+I ++ +L L + L
Sbjct: 128 SRIAPLVSVETLDLSNNDITELRGYSFPAGLQIKDLYLNNNKIGALELGALDHLGSTLQV 187
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LS N++++ + + L RL ++L+ N+I +
Sbjct: 188 LRLSRNRISQIPVRAFQ-LPRLTLLELNRNRIRQV 221
>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 428
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N T+L + L +L L+L +NRLK+L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L +NR+T L + L LQ + NQ+T + R E L NL
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR-ESGKLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +NQ+T++ + L L L L NQLT L +I LK L+T++LS N++
Sbjct: 166 QELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT-LFKEIEQLKNLQTLNLSDNQL 221
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L + L +L L+L++N+L +L + G L LQ L + NQL L
Sbjct: 119 LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L LQ N+ NQ+T + E L NL ++
Sbjct: 179 PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL-PIEIGKLQNLHTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T+++ + L L L LS NQLT + +I L+ L T++LS N++
Sbjct: 238 NLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPI-EIGKLQNLHTLNLSGNQL 290
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L+ L L+ N+L +L ++G L L L + NQL L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + N++T+L + L LQ N+ NQ+T + + E + L NL ++
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSK-EIEQLKNLQTL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
SL N++ + + L L L L +NQLT + +I L+ L+T+ L N++ F
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPI-EIGQLQNLQTLSLYKNRLMTF 385
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L+ NRL L ++G L LQ L + NQL AL
Sbjct: 303 LQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTAL 362
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
P +I L +L NR+ + + L LQ
Sbjct: 363 PIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTL 398
>gi|27819886|gb|AAO24991.1| LP05663p [Drosophila melanogaster]
Length = 527
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 48 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 107
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q SQL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 108 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTML 166
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 167 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 219
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N+++ L +G L L L
Sbjct: 130 IPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 189
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L M +N+++ V
Sbjct: 190 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPAT- 248
Query: 172 FQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+N ++D +++ N IT M +SLSGLT + LS NQ + + +
Sbjct: 249 LKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTIT---LSRNQFASYPTGGPAQFTNVYS 305
Query: 228 VDLSYNKINKF 238
++L +N+I+K
Sbjct: 306 INLEHNRIDKI 316
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I R L + N+LTSL SL+ + L L L +N+L + + L L L
Sbjct: 84 LPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTL 143
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N++ A+ D++ L L N+I L + L L ++ N + + D
Sbjct: 144 YLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPED- 202
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
N NL ++ LQ+N++ + S+ L L L + +N+L+
Sbjct: 203 IGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLS 243
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 24/146 (16%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L KL++L +E+N++E LP
Sbjct: 352 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 411
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 412 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLGNLTHLSV 447
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHN 209
N + + + L L LY++ N
Sbjct: 448 SENNLQFLPEEIGSLESLENLYINQN 473
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
+ ++ + +PS ++ L LY +N+I L + L L+ ++ N +T + +
Sbjct: 53 LSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLP-ESL 111
Query: 173 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
QN L + L++N++ + + L L LYL N++T + DD+R L L + L
Sbjct: 112 QNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-VADDLRQLVNLTMLSLRE 170
Query: 233 NKINKFGT 240
NKI + G+
Sbjct: 171 NKIRELGS 178
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+S+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 231 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 290
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 291 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 346
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L++LR +DL N+
Sbjct: 347 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRKLRILDLEENR 405
Query: 235 I 235
I
Sbjct: 406 I 406
>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 428
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N T+L + L +L L+L +NRLK+L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L +NR+T L + L LQ + NQ+T + R E L NL
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR-ESGKLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +NQ+T++ + L L L L NQLT L +I LK L+T++LS N++
Sbjct: 166 QELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT-LFKEIEQLKNLQTLNLSDNQL 221
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L + L +L L+L++N+L +L + G L LQ L + NQL L
Sbjct: 119 LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L LQ N+ NQ+T + E L NL ++
Sbjct: 179 PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL-PIEIGKLQNLHTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T+++ + L L L LS NQLT + +I L+ L T++LS N++
Sbjct: 238 NLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPI-EIGKLQNLHTLNLSGNQL 290
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L+ L L+ N+L +L ++G L L L + NQL L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + N++T+L + L LQ N+ NQ+T + + E + L NL ++
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSK-EIEQLKNLQTL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
SL N++ + + L L L L +NQLT + +I L+ L+T+ L N++ F
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPI-EIGQLQNLQTLSLYKNRLMTF 385
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L+ NRL L ++G L LQ L + NQL AL
Sbjct: 303 LQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTAL 362
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
P +I L +L NR+ + + L LQ
Sbjct: 363 PIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTL 398
>gi|195443980|ref|XP_002069663.1| GK11454 [Drosophila willistoni]
gi|261277889|sp|B4N9T4.1|SUR8_DROWI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|194165748|gb|EDW80649.1| GK11454 [Drosophila willistoni]
Length = 641
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + N+++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 162 IKRLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSL 221
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q +QL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 222 PDSLQHCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITTV-ADDLRQLVNLTML 280
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 333
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N+++ L +G L L L
Sbjct: 244 IPPVIYRLRSLTTLYLRFNRITTVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 303
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L + +N++T V
Sbjct: 304 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLTSVPAS- 362
Query: 172 FQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+N ++D +++ N IT + + L+ L L + LS NQ T + + ++L
Sbjct: 363 LKNCKSMDEFNVEGNGITQLPDGMLASLNGLTIITLSRNQFTSYPTGGPAQFTNVYNINL 422
Query: 231 SYNKINKF 238
+N+I+K
Sbjct: 423 EHNRIDKI 430
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L KL++L +E+N++E LP
Sbjct: 466 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 525
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L +L L N+IT L + L++L ++ N + + +E +L +L+++ +
Sbjct: 526 EIGLLHELQRLILQTNQITMLPRSIGHLSQLTHLSVSENNLQFL-PEEIGSLESLENLYI 584
Query: 184 -QNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
QN + + L+ L YL + L+
Sbjct: 585 NQNPGLEKLPFELALCQNLKYLNIDKCPLS 614
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N LTS+ SL+ ++ + N + L +G L +L+ L ++ + +NQ
Sbjct: 345 SLVRLGLRYNRLTSVPASLKNCKSMDEFNVEGNGITQLPDGMLASLNGLTIITLSRNQFT 404
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + ++ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 405 SYPTGGPAQFTNVYNINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 460
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L++LR +DL N+
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRKLRILDLEENR 519
Query: 235 I 235
I
Sbjct: 520 I 520
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
+ ++ + +P+ ++ L LY +N+I L + L L+ ++ N +T + D
Sbjct: 167 LSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLP-DSL 225
Query: 173 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
Q+ + L + L++N++ + + L L LYL N++T + DD+R L L + L
Sbjct: 226 QHCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITT-VADDLRQLVNLTMLSLRE 284
Query: 233 NKINKFGT 240
NKI + G+
Sbjct: 285 NKIRELGS 292
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 15 LNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTI---RKLHV---G 68
+N+++L T + DD+ L L+L NN + I P TI RKL +
Sbjct: 462 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI-----PNTIGNLRKLRILDLE 516
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
N + L + + L +L L L N++ L +G LS+L L + +N L+ LP +I
Sbjct: 517 ENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLSQLTHLSVSENNLQFLPEEIGSL 576
Query: 129 SQLGSLYANNN 139
L +LY N N
Sbjct: 577 ESLENLYINQN 587
>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
Length = 332
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L L WL+L NN+L +L ++G L +L+ L + NQL L
Sbjct: 45 LQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRIL 104
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NNR+ S + L+ LQ ++++N+ T + + E LH L +
Sbjct: 105 PQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPK-EIGTLHRLPWL 163
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L++NQ+T++ + L +L +L L +N+L L +I L++L+ + L+ N++
Sbjct: 164 NLEHNQLTTLPQEIGRLERLEWLNLYNNRLA-TLPKEIGTLQKLQHLYLANNQL 216
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L S + L++L L L NR +L ++GTL +L L +E NQL L
Sbjct: 114 LKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTL 173
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L NNR+ +L + L KLQ + NQ+ + + E L NL +
Sbjct: 174 PQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPQ-EIGQLQNLKDL 232
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +NQ+ ++ + L +L +L L +NQL L +I L+ L+ +DLS N F
Sbjct: 233 DLSDNQLVTLPEEIGTLQRLEWLSLKNNQL-RTLPQEIGQLQNLKDLDLSGNPFTTF 288
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + +N LT+L + L +L L + NN+L +L ++GTL LQ L +E N+L LP +
Sbjct: 2 LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKE 61
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +L LY NN++ +L + L +L+ + NQ+ ++ + E L NL + L+
Sbjct: 62 IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQ-EIGKLQNLKELILE 120
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NN++ S + L+ L L+L +N+ T L +I L RL ++L +N++
Sbjct: 121 NNRLESFPKEIGTLSNLQRLHLEYNRFT-TLPKEIGTLHRLPWLNLEHNQL 170
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L+V N L +L + L +L L L NNRL +L ++GTL KL+ L + NQL L
Sbjct: 22 LQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLATL 81
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L NN++ L + L L+ ++ N++ + E L NL +
Sbjct: 82 PKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPK-EIGTLSNLQRL 140
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ N+ T++ + L +L +L L HNQLT L +I L+RL ++L N++
Sbjct: 141 HLEYNRFTTLPKEIGTLHRLPWLNLEHNQLT-TLPQEIGRLERLEWLNLYNNRL 193
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 52 HIHENAF---PPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
H+ N F P I LH + N LT+L + L L WL L NNRL +L ++
Sbjct: 141 HLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEI 200
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
GTL KLQ L + NQL LP +I L L ++N++ +L + L +L+ ++ N
Sbjct: 201 GTLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNN 260
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
Q+ + + E L NL + L N T+ + G
Sbjct: 261 QLRTLPQ-EIGQLQNLKDLDLSGNPFTTFPQEIVG 294
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
+L L N+L +L ++G L LQ L + NQL LP +I L SL NNR+ +L
Sbjct: 1 YLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPK 60
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
+ L KL+ + NQ+ + + E L L+ + L NNQ+ + + L L L L
Sbjct: 61 EIGTLQKLEWLYLTNNQLATLPK-EIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELIL 119
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+N+L F +I L L+ + L YN+
Sbjct: 120 ENNRLESF-PKEIGTLSNLQRLHLEYNR 146
>gi|418712094|ref|ZP_13272839.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791361|gb|EKR85037.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|455791555|gb|EMF43362.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 238
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 10/203 (4%)
Query: 27 HPLTSDDLKGTPALITLLLVNN-NITHIHENAFPPTI------RKLHVGFNNLTSLNNSL 79
P+T DL T AL L V N++ FP I ++LH+ N T+L +
Sbjct: 33 EPVTYRDL--TKALQNPLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEI 90
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
L +L L L +N+LK+L ++G L LQ + +++N+L LP++I L SLY N N
Sbjct: 91 EQLQNLKSLDLWDNQLKTLPKEIGQLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYN 150
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
++T L + L L+ +++NQ+TM+ + E L NL+ + L+ NQ+T++ + L
Sbjct: 151 QLTILPKEIGQLQNLESLYLNYNQLTMLPQ-EIGQLQNLEGLYLKYNQLTTLPKEIGRLQ 209
Query: 200 KLAYLYLSHNQLTEFLLDDIRGL 222
L LYL +NQ + + I+ L
Sbjct: 210 NLKRLYLKYNQFSSKEKEKIQKL 232
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 5/187 (2%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ L + + L +L L L++N+ +L ++ L L+ L + NQL
Sbjct: 47 PLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ LP +I L + + NR+ +L + L L+ +++NQ+T++ + E L NL
Sbjct: 107 KTLPKEIGQLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTILPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+S+ L NQ+T + + L L LYL +NQLT + + RL+ + Y K N+F
Sbjct: 166 ESLYLNYNQLTMLPQEIGQLQNLEGLYLKYNQLTTL----PKEIGRLQNLKRLYLKYNQF 221
Query: 239 GTRNEGK 245
++ + K
Sbjct: 222 SSKEKEK 228
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 67 VGFNNLT-SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
V + +LT +L N L G+ LN L+ +LK+ ++G L LQ L + NQ LP +I
Sbjct: 35 VTYRDLTKALQNPL-GVRILN---LSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEI 90
Query: 126 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+ L SL +N++ +L + L LQ N+D N++ + +E L NL+S+ L
Sbjct: 91 EQLQNLKSLDLWDNQLKTLPKEIGQLQNLQKMNLDKNRLNTL-PNEIGQLQNLESLYLNY 149
Query: 186 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ+T + + L L LYL++NQLT L +I L+ L + L YN++
Sbjct: 150 NQLTILPKEIGQLQNLESLYLNYNQLT-MLPQEIGQLQNLEGLYLKYNQL 198
>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 356
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L ++ L +L L L NN+ K+L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ LP +I L +L + NR+T+ + L LQ N+D+NQ+T + + E L NL
Sbjct: 107 KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQ-EIGQLKNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L N++ ++ + + L L LYLS+NQLT L ++I LK L+ + L N++
Sbjct: 166 QKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLT-ILPEEIGQLKNLQALILGDNQL 221
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+ + L +L L L+ N+L +L ++G L LQ L +++N+L+AL
Sbjct: 119 LQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKAL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I L LY +NN++T L + L LQ + NQ+T++ ++ + QNL L
Sbjct: 179 PNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLY 238
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ NN++T + + L KL YLYLSHNQLT L +I L+ L+ + L+ N++
Sbjct: 239 SV---NNELTILPQEIGQLQKLQYLYLSHNQLTT-LPKEIGQLENLQELYLNDNQL 290
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N L +L N + L +L L+L+NN+L L ++G L LQ L++ NQL L
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY+ NN +T L + L KLQ + NQ+T + + E L NL +
Sbjct: 225 PKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPK-EIGQLENLQEL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+T++ + L L +NQLT L +I L+ L+ + L+ N++
Sbjct: 284 YLNDNQLTTLPKEIGQLKNLQTFISFNNQLT-MLPQEIGQLQNLQWLKLNNNQL 336
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 21/218 (9%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSL 75
L ++ LK P I TL+L N +T FP I +KL++ +N LT+L
Sbjct: 101 LWNNQLKNLPKEIGQLQNLQTLILSVNRLT-----TFPQEIGQLKNLQKLNLDYNQLTTL 155
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
+ L +L L L+ NRLK+L ++G L LQ L + NQL LP +I L +L
Sbjct: 156 LQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+N++T L + L L++ N++T++ + E L L + L +NQ+T++ +
Sbjct: 216 LGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQ-EIGQLQKLQYLYLSHNQLTTLPKEI 274
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L L LYL+ NQLT L +I LK L+T +S+N
Sbjct: 275 GQLENLQELYLNDNQLTT-LPKEIGQLKNLQTF-ISFN 310
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L NN +T + E ++ L +G N LT L + L +L L+ NN L L +
Sbjct: 191 LYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQE 250
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L KLQ L + NQL LP +I L LY N+N++T+L + L LQ F
Sbjct: 251 IGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFN 310
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITS 190
NQ+TM+ + E L NL + L NNQ++S
Sbjct: 311 NQLTMLPQ-EIGQLQNLQWLKLNNNQLSS 338
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L L +L+L++N+L +L ++G L LQ L + NQL LP +I
Sbjct: 242 NELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLK 301
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
L + + NN++T L + L LQ ++ NQ++ + Q L
Sbjct: 302 NLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEERIQKL 347
>gi|418677883|ref|ZP_13239157.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418687625|ref|ZP_13248784.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|400321073|gb|EJO68933.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410737949|gb|EKQ82688.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 288
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 2/180 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N +T+L + + L +L L LN NRL+++ ++G L L+ L I N+L+ L
Sbjct: 75 LKELYLSTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIGLNKLKTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELTKLPQ-EIKNLEGLIEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +NQ T++ + L L LYLS NQL L +I LK L+ + L N++ K +
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLKELYLSRNQLIS-LPSEIGNLKNLKELYLEENQLTKLPKQ 252
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L +G N L +L + L +L L+L+ N+LK L ++ L KLQ + + N+L L
Sbjct: 121 LKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELTKL 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +Y +N+ T+L + L L+ + NQ+ + E NL NL +
Sbjct: 181 PQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLKELYLSRNQLISLP-SEIGNLKNLKEL 239
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
L+ NQ+T + ++ L KL+ L L NQ F ++ +KRL
Sbjct: 240 YLEENQLTKLPKQIAALKKLSRLSLEGNQ---FPSEEKERIKRL 280
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E N L+ LP +I L LY + N IT+L + L LQV +++ N++ + + E
Sbjct: 58 EDNPLKTLPKEIGNLKNLKELYLSTNEITTLPSEIGNLKNLQVLSLNVNRLETIPK-EIG 116
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
NL NL +S+ N++ ++ + L L LYLS NQL + L +I LK+L+ + LS N
Sbjct: 117 NLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQL-KVLPQEIWNLKKLQRMHLSTN 175
Query: 234 KINKF 238
++ K
Sbjct: 176 ELTKL 180
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
+N LK+L ++G L L+ L + N++ LPS+I L L N NR+ ++ + L
Sbjct: 59 DNPLKTLPKEIGNLKNLKELYLSTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNL 118
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L+ ++ N++ + + E NL NL + L NQ+ + + L KL ++LS N+L
Sbjct: 119 KNLKELSIGLNKLKTLPK-EIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNEL 177
Query: 212 TEFLLDDIRGLKRLRTVDLSYNK 234
T+ L +I+ L+ L + L N+
Sbjct: 178 TK-LPQEIKNLEGLIEIYLYDNQ 199
>gi|418703877|ref|ZP_13264760.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418710678|ref|ZP_13271446.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418714400|ref|ZP_13274960.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410766574|gb|EKR37258.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410768900|gb|EKR44145.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410789343|gb|EKR83045.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 288
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L + L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRMHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTD---LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
KL + T L + + D LN+ N LK+L ++G L L+ L + N++
Sbjct: 28 KLPLKPGEYTDLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITT 87
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L L N NR+ ++ + L L+ ++++N++ + + E NL NL
Sbjct: 88 LPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPK-EIGNLKNLKE 146
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L NQ+ + + L KL ++LS N+LT+ L +I+ L+ L + L N+
Sbjct: 147 LYLSRNQLKILPQEIGNLRKLQRMHLSTNELTK-LPQEIKNLESLLEIYLYDNQ 199
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L LY N++T L + L +L ++ NQ ++ Q L +I
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPSEEKERIQRLLPKCNI 286
Query: 182 S 182
S
Sbjct: 287 S 287
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ + + L L +SL+ NQ S
Sbjct: 241 LEENQLTMLPK-QIAALKQLARLSLKGNQFPS 271
>gi|418688970|ref|ZP_13250097.1| leucine rich repeat protein, partial [Leptospira interrogans str.
FPW2026]
gi|400361861|gb|EJP17822.1| leucine rich repeat protein, partial [Leptospira interrogans str.
FPW2026]
Length = 336
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG----------------TL 105
+++L++ +N LT L N + L +L L LNNN+L +L ++G TL
Sbjct: 99 LQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTL 158
Query: 106 SK-------LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
SK LQ L + NQL LP++I L +L NNN++ +L + L L+ +
Sbjct: 159 SKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLD 218
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ +NQ ++ +E + L NL + L NNQ+T+++ + L L LYLS+NQLT L ++
Sbjct: 219 LGYNQFKII-PNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQLT-ILPNE 276
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK L+ ++L+ N++
Sbjct: 277 IGQLKNLQVLELNNNQL 293
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L N + L +L L LNNN+LK+L ++G L L+ L + NQ + +
Sbjct: 168 LQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKII 227
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I+ L L NNN++T+L + L LQ + +NQ+T++ +E L NL +
Sbjct: 228 PNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQLTIL-PNEIGQLKNLQVL 286
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+ +++ + L L L L++NQL+ + IR L
Sbjct: 287 ELNNNQLKTLSKEIGQLKNLKRLELNNNQLSSEEKERIRKL 327
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 27/201 (13%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L+ L L+ N L + ++G L L++L + NQL
Sbjct: 4 PLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQL 63
Query: 119 EALPSDI------------------------QLFSQLGSLYANNNRITSLDGLLRGLTKL 154
+ P +I QL L LY N N++T L + L L
Sbjct: 64 KTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQL-KNLQELYLNYNQLTILPNEIGQLKNL 122
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
Q ++ NQ+ M +E L NL +++L NNQ+ +++ + L L LYL++NQLT
Sbjct: 123 QALELNNNQL-MTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLT-I 180
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
L ++I LK L+ ++L+ N++
Sbjct: 181 LPNEIGQLKNLQALELNNNQL 201
>gi|427725244|ref|YP_007072521.1| adenylate cyclase [Leptolyngbya sp. PCC 7376]
gi|427356964|gb|AFY39687.1| Adenylate cyclase [Leptolyngbya sp. PCC 7376]
Length = 287
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + N +T + S+ LT+L L+L+ NR+ + + L L +L+++ NQ+ +P
Sbjct: 47 RLELDHNRITEVPESIAQLTNLTTLYLSENRITEISEAIAPLRNLTMLILKNNQIAKIPE 106
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR-------------- 169
I + L +L ++N++T + + LT L ++ +NQ+T +
Sbjct: 107 AIAQLTNLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLG 166
Query: 170 --------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
E L NL + L NQIT + +++ LT L L L +NQ+TE + + I
Sbjct: 167 RNHLTEIPKEISQLANLTELLLYKNQITKVPKAITQLTNLKMLSLFNNQITE-IPEAIAQ 225
Query: 222 LKRLRTVDLSYNKI 235
L L T+DLSYN++
Sbjct: 226 LTNLETLDLSYNQL 239
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLHVGF---NNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L TL L N IT I E P +R L + N + + ++ LT+L L L++N+L
Sbjct: 68 LTTLYLSENRITEISEAIAP--LRNLTMLILKNNQIAKIPEAIAQLTNLTTLNLSHNQLT 125
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+ + L+ L L + NQL +P I ++L SL N +T + + L L
Sbjct: 126 EISEAIAQLTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLGRNHLTEIPKEISQLANLTE 185
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ NQIT V + Q L NL +SL NNQIT + +++ LT L L LS+NQLT
Sbjct: 186 LLLYKNQITKVPKAITQ-LTNLKMLSLFNNQITEIPEAIAQLTNLETLDLSYNQLT 240
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
QL L++L+L + N++ +P I + L +LY + NRIT + + L L + +
Sbjct: 40 AQLTNLTRLEL---DHNRITEVPESIAQLTNLTTLYLSENRITEISEAIAPLRNLTMLIL 96
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
NQI + + L NL +++L +NQ+T ++ +++ LT L L LS+NQLTE + + I
Sbjct: 97 KNNQIAKI-PEAIAQLTNLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTE-IPEAI 154
Query: 220 RGLKRLRTVDLSYNKINKF 238
L +L ++ L N + +
Sbjct: 155 TKLTKLTSLRLGRNHLTEI 173
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L +N +T I E T + L + +N LT + ++ LT L L L N L +
Sbjct: 114 LTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLGRNHLTEI 173
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L+ L L++ +NQ+ +P I + L L NN+IT + + LT L+ +
Sbjct: 174 PKEISQLANLTELLLYKNQITKVPKAITQLTNLKMLSLFNNQITEIPEAIAQLTNLETLD 233
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSG 197
+ +NQ+T + + L NL +SL N + + +S+ SG
Sbjct: 234 LSYNQLTTI-PESISQLTNLVILSLYQNPLDPIVHSAYSG 272
>gi|359727310|ref|ZP_09266006.1| hypothetical protein Lwei2_10290 [Leptospira weilii str.
2006001855]
Length = 307
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P +R L++ + LT+L + L +L L+L+ N+ K+L ++G L L
Sbjct: 39 NLTKALKN--PKDVRVLNLSGDRLTTLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + N+L LP +I +L L+ + N++ +L + + LQ ++ NQ+T +
Sbjct: 97 QKLDLSGNELAILPEEIGQLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNLP 156
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+ E LH L + L +NQ+ ++ + L KL L LS NQL E L +I L++L+ +
Sbjct: 157 K-EIGKLHKLQVLELNSNQLKTLPKEIGQLQKLPDLDLSGNQL-ETLPKEIGQLQKLQKL 214
Query: 229 DLSYNKI 235
DL+ N++
Sbjct: 215 DLAENQL 221
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L +L + + +L L L+ N+L +L ++G L KLQ+L + NQL+ L
Sbjct: 119 LQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQVLELNSNQLKTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L + N++ +L + L KLQ ++ NQ+ ++ + + L +
Sbjct: 179 PKEIGQLQKLPDLDLSGNQLETLPKEIGQLQKLQKLDLAENQLAVLPK----GIEKLKEL 234
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L +NQ+T+++ + L L L L +N+LT L +I L+ LR + L N I +
Sbjct: 235 DLSSNQLTNLSQEIGKLKNLRILNLDYNRLT-TLPKEIGKLQNLRELYLHKNPIAR 289
>gi|195570161|ref|XP_002103077.1| GD20236 [Drosophila simulans]
gi|194199004|gb|EDX12580.1| GD20236 [Drosophila simulans]
Length = 724
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 206 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 265
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q SQL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 266 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTML 324
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 325 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 377
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N+++ L +G L L L
Sbjct: 288 IPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 347
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L M +N+++ V
Sbjct: 348 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPAT- 406
Query: 172 FQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+N ++D +++ N IT M +SLSGLT + LS NQ + + +
Sbjct: 407 LKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTIT---LSRNQFASYPTGGPAQFTNVYS 463
Query: 228 VDLSYNKINKF 238
++L +N+I+K
Sbjct: 464 INLEHNRIDKI 474
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I R L + N+LTSL SL+ + L L L +N+L + + L L L
Sbjct: 242 LPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTL 301
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N++ A+ D++ L L N+I L + L L ++ N + + D
Sbjct: 302 YLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPED- 360
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
N NL ++ LQ+N++ + S+ L L L + +N+L+
Sbjct: 361 IGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSV 403
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L +L++L +E+N++E LP
Sbjct: 510 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPH 569
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 570 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLGNLTHLSV 605
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
N + + + L L LY++ N E L
Sbjct: 606 SENNLQFLPEEIGSLESLENLYINQNPGLEKL 637
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+++ L + ++ + +PS ++ L LY +N+I L + L L+ ++ N +T
Sbjct: 204 CRIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLT 263
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ + QN L + L++N++ + + L L LYL N++T + DD+R L L
Sbjct: 264 SL-PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-VADDLRQLVNL 321
Query: 226 RTVDLSYNKINKFGT 240
+ L NKI + G+
Sbjct: 322 TMLSLRENKIRELGS 336
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+S+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 389 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 448
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 449 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 504
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L+RLR +DL N+
Sbjct: 505 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRRLRILDLEENR 563
Query: 235 I 235
I
Sbjct: 564 I 564
>gi|418734750|ref|ZP_13291181.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410772622|gb|EKR52663.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 288
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L + L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRMHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTD---LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
KL + T L + + D LN+ N LK+L ++G L L+ L + N++
Sbjct: 28 KLPLKPGEYTDLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITT 87
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L L N NR+ ++ + L L+ ++++N++ + + E NL NL
Sbjct: 88 LPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPK-EIGNLKNLKE 146
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L NQ+ + + L KL ++LS N+LT+ L +I+ L+ L + L N+
Sbjct: 147 LYLSRNQLKILPQEIGNLRKLQRMHLSTNELTK-LPQEIKNLESLLEIYLYDNQ 199
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L LY N++T L + L +L ++ NQ ++ Q L +I
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPSEEKERIQRLLPKCNI 286
Query: 182 S 182
S
Sbjct: 287 S 287
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ + + L L +SL+ NQ S
Sbjct: 241 LEENQLTMLPK-QIAALKQLARLSLKGNQFPS 271
>gi|195110657|ref|XP_001999896.1| GI22824 [Drosophila mojavensis]
gi|193916490|gb|EDW15357.1| GI22824 [Drosophila mojavensis]
Length = 471
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
Query: 35 KGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
+G P T +N + H I+ L + +++T L ++R L L+L +N+
Sbjct: 108 EGAPITRTRTFLNRCLLDQHSCVNGIRIKLLDLSKSSITVLPTTVRECVHLTELYLYSNK 167
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
+ L ++G L L+ L + +N L +LP ++ +QL L +N++ + ++ L L
Sbjct: 168 IVQLPAEIGCLVNLRNLALNENSLTSLPESLRNCTQLKVLDLRHNKLAEIPPVIYQLRSL 227
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ FN+IT V D+ + L NL +SL+ N+I + S++ L L L +SHN L E
Sbjct: 228 TTLYLRFNRITAV-ADDLRQLVNLTMLSLRENKIKELGSAIGSLVNLTTLDVSHNHL-EH 285
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
L DDI L +DL +N++
Sbjct: 286 LPDDIGNCVNLNALDLQHNEL 306
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 29/203 (14%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N++K L +G+L L L
Sbjct: 217 IPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKELGSAIGSLVNLTTL 276
Query: 112 VIEQNQLEALPSDI---------------------QLFSQLGSLYANNNRITSLDGLLRG 150
+ N LE LP DI + + L L +NN + + +
Sbjct: 277 DVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSIGNNLEILILSNNMLKKIPNTIGN 336
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
L KL++ +++ N+I ++ E LH L + LQ NQIT + S+ L+ L +L +S N
Sbjct: 337 LRKLRILDLEENRIEVLPH-EVGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENN 395
Query: 211 LTEFLLDDIRGLKRLRTVDLSYN 233
L +FL ++I L+ L + ++ N
Sbjct: 396 L-QFLPEEIGSLESLENLYINQN 417
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
+++LL + ++ + LP+ ++ L LY +N+I L + L L+ ++ N +T
Sbjct: 134 RIKLLDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLTS 193
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ + +N L + L++N++ + + L L LYL N++T + DD+R L L
Sbjct: 194 LP-ESLRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITA-VADDLRQLVNLT 251
Query: 227 TVDLSYNKINKFGT 240
+ L NKI + G+
Sbjct: 252 MLSLRENKIKELGS 265
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTD-----LNWLFLNNNRLKSLEGQLG 103
+++H H P I V N L +N L + D L L L+NN LK + +G
Sbjct: 277 DVSHNHLEHLPDDIGNC-VNLNALDLQHNELLDIPDSIGNNLEILILSNNMLKKIPNTIG 335
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L KL++L +E+N++E LP ++ L L +LQ + NQ
Sbjct: 336 NLRKLRILDLEENRIEVLPHEVGL-----------------------LHELQRLILQTNQ 372
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
ITM+ R +L NL +S+ N + + + L L LY++ N
Sbjct: 373 ITMLPRS-IGHLSNLTHLSVSENNLQFLPEEIGSLESLENLYINQN 417
>gi|270003577|gb|EFA00025.1| hypothetical protein TcasGA2_TC002832 [Tribolium castaneum]
Length = 582
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 118/214 (55%), Gaps = 9/214 (4%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
LK ++ + + NN +T I EN F P +R L++ N S+ + L L L L+LN
Sbjct: 173 LKNLKSVEEVYMNNNQLTQIEENDFEPLQKLRILNLAHNFQVSIKSPLFFL-HLQELYLN 231
Query: 92 NNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLR 149
NNRLKS+ Q L L++L I N E + SD LF QL + NN+I +L+G +L
Sbjct: 232 NNRLKSINAQEFVRLPSLRILKIGNNLFETI-SDNHLFEQLEEFHGENNQIKALNGHILN 290
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
L L++ N+ N + + D F + + + L +N++ ++ + + +++L L +
Sbjct: 291 KLENLKMVNLSNNALKNIEGDTFATSNRIKVVDLSSNKLAKIDPRNFRNMNNVSFLNLHN 350
Query: 209 NQLTEFLL--DDIRGLKRLRTVDLSYNKINKFGT 240
N LT+ ++ D+++ L +L +DLSYN+I++ T
Sbjct: 351 NSLTQEVISCDNLQNLMQLNVLDLSYNEISEIYT 384
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 9/209 (4%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLK 96
P+L L + NN I +N + + H N + +LN L L +L + L+NN LK
Sbjct: 247 PSLRILKIGNNLFETISDNHLFEQLEEFHGENNQIKALNGHILNKLENLKMVNLSNNALK 306
Query: 97 SLEGQ-LGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRIT----SLDGLLRG 150
++EG T ++++++ + N+L + P + + + + L +NN +T S D L +
Sbjct: 307 NIEGDTFATSNRIKVVDLSSNKLAKIDPRNFRNMNNVSFLNLHNNSLTQEVISCDNL-QN 365
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHN 209
L +L V ++ +N+I+ + F+ L L +SL N + ++ S+ L L L L+HN
Sbjct: 366 LMQLNVLDLSYNEISEIYTCTFRKLEKLQKLSLLANHLKTIPPSAFQTLHNLQELNLAHN 425
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QLTE + +GL LR +++S+N++ KF
Sbjct: 426 QLTEIPENSFQGLGELRNLNISHNRLTKF 454
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 35 KGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
K + TL N I + + A ++R + + FN L + L+ L + +++NN
Sbjct: 127 KHAEKITTLNASYNKIDELKDEALADLKSLRVVDLSFNRLAQIGTGLKNLKSVEEVYMNN 186
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG--LLR 149
N+L + E L KL++L + N ++ S + F L LY NNNR+ S++ +R
Sbjct: 187 NQLTQIEENDFEPLQKLRILNLAHNFQVSIKSPL-FFLHLQELYLNNNRLKSINAQEFVR 245
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSH 208
L L++ + N + + L+ +NNQI ++N L+ L L + LS+
Sbjct: 246 -LPSLRILKIGNNLFETISDNHL--FEQLEEFHGENNQIKALNGHILNKLENLKMVNLSN 302
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
N L D R++ VDLS NK+ K RN
Sbjct: 303 NALKNIEGDTFATSNRIKVVDLSSNKLAKIDPRN 336
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
F+ NL + L +NQ+ S+N S K+ L S+N++ E + + LK LR VDLS
Sbjct: 105 FEKYPNLVHLDLSDNQV-SLNFSKHA-EKITTLNASYNKIDELKDEALADLKSLRVVDLS 162
Query: 232 YNKINKFGT 240
+N++ + GT
Sbjct: 163 FNRLAQIGT 171
>gi|124004137|ref|ZP_01688983.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123990207|gb|EAY29706.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 313
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 98/180 (54%), Gaps = 7/180 (3%)
Query: 49 NITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++TH H P ++ RKL++G+N LT L NSL + L+ L+L+ N L++L
Sbjct: 127 HLTHNHLTQLPDSLGQLHQLRKLYLGYNQLTQLPNSLYRASQLHSLYLHYNHLQALPDTF 186
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G S+L+ + N+L LP +I L +L +NN++T L + L +LQ+ ++ N
Sbjct: 187 GKFSQLEECYLNANKLTVLPDNIGTLKHLKTLTLHNNQLTILPESIGELAQLQMLDLSSN 246
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+T + + + L +L +++L+ NQ TS+ + L L L L N LT+F + IR L
Sbjct: 247 YLTSL-PNSIRQLQSLQTLNLRFNQFTSLPPEIGHLYYLQKLILKDNPLTQFEREKIREL 305
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L+SL S+ L +L+ L L +N L L LG L +L+ L + NQL LP+ + S
Sbjct: 108 NLLSSLPESIGNLPNLHELHLTHNHLTQLPDSLGQLHQLRKLYLGYNQLTQLPNSLYRAS 167
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
QL SLY + N + +L ++L+ ++ N++T V D L +L +++L NNQ+T
Sbjct: 168 QLHSLYLHYNHLQALPDTFGKFSQLEECYLNANKLT-VLPDNIGTLKHLKTLTLHNNQLT 226
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ S+ L +L L LS N LT L + IR L+ L+T++L +N+
Sbjct: 227 ILPESIGELAQLQMLDLSSNYLTS-LPNSIRQLQSLQTLNLRFNQF 271
>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 430
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N T+L + L +L L+L +NRLK+L ++G L LQ L + NQL
Sbjct: 49 PLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQL 108
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L +NR+T L + L LQ + NQ+T + R E L NL
Sbjct: 109 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR-ESGKLGNL 167
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +NQ+T++ + L L L L NQLT L +I LK L+T++LS N++
Sbjct: 168 QELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT-LFKEIEQLKNLQTLNLSDNQL 223
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L + L +L L+L++N+L +L + G L LQ L + NQL L
Sbjct: 121 LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTL 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L LQ N+ NQ+T + E L NL ++
Sbjct: 181 PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL-PIEIGKLQNLHTL 239
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +NQ+ + + L L L LS NQLT + +I L+ L T++LS N++
Sbjct: 240 NLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPI-EIGKLQNLHTLNLSGNQL 292
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L+ L L++N+L L ++G L L L + NQL L
Sbjct: 213 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTL 272
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + N++T+L + L LQ N+ NQ+T + + E + L NL ++
Sbjct: 273 PIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSK-EIEQLKNLQTL 331
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
SL N++ + + L L L L +NQLT + +I L+ L+T+ L N++ F
Sbjct: 332 SLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPI-EIGQLQNLQTLSLYKNRLMTF 387
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L+ NRL L ++G L LQ L + NQL AL
Sbjct: 305 LQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTAL 364
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
P +I L +L NR+ + + L LQ
Sbjct: 365 PIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTL 400
>gi|348524990|ref|XP_003450005.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oreochromis
niloticus]
Length = 570
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 96/172 (55%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + ++ +L S++ LT L L+L +N+L+SL ++G LS L L + +N L +LP
Sbjct: 92 RLDLSKRSIHTLPTSIKELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPD 151
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ +L L +N++ + ++ LT L + FN+IT V +D +NL L +S+
Sbjct: 152 SLDSLKKLRMLDLRHNKLREIPPVVYRLTSLTTLYLRFNRITTVEKD-IRNLSKLTMLSI 210
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 211 RENKIKQLPAEIGELCSLITLDVAHNQL-EHLPKEIGHCTQITNLDLQHNEL 261
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L+ L L L+ N L SL L +L KL++L + N+L +P
Sbjct: 115 ELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPP 174
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L +LY NRIT+++ +R L+KL + ++ N+I + E L +L ++ +
Sbjct: 175 VVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPA-EIGELCSLITLDV 233
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L + I L + + L YN+++
Sbjct: 234 AHNQLEHLPKEIGHCTQITNLDLQHNELLD-LPETIGNLASINRLGLRYNRLSAI 287
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N LT + + GL L L L+NN LK L +G L KL+ L +E+N+LE LP+
Sbjct: 394 ELNLATNQLTKIPEDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPN 453
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L NN++T L + L L + NQ+ + +E L NL+ + L
Sbjct: 454 EIAYLKDLQKLVLTNNQLTMLPRGIGHLLNLTHLGLGENQLQHL-PEEIGTLENLEELYL 512
Query: 184 QNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+N + S+ L+ +KL+ + + + LT + G
Sbjct: 513 NDNPNLHSLPFELALCSKLSIMSIENCPLTHLPPQIVAG 551
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP + +L ++ FN +T++ +R L+ L L + N++K L ++G L L L
Sbjct: 172 IPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSLITL 231
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQLE LP +I +Q+ +L +N + L + L + + +N+++ + R
Sbjct: 232 DVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSL 291
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
Q + NN LS L L L L+ N + + + ++++
Sbjct: 292 AQCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNME 351
Query: 232 YNKINK--FGTRNEGK 245
+N+INK FG + K
Sbjct: 352 HNRINKIPFGIFSRAK 367
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 29/224 (12%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+LITL + +N + H+ E I L + N L L ++ L +N L L NRL +
Sbjct: 227 SLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSA 286
Query: 98 L------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLG 132
+ EG L +L L L + +N ++ P FS +
Sbjct: 287 IPRSLAQCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIY 346
Query: 133 SLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
SL +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 347 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLD-FGTWTSMVELNLATNQLTKI 405
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ GL L L LS+N L + L I L++LR +DL NK+
Sbjct: 406 PEDICGLASLEVLILSNNLLKK-LPHGIGNLRKLRELDLEENKL 448
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L L N + L DL L L
Sbjct: 407 EDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVL 466
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L L +G L L L + +NQL+ LP +I L LY N+N + SL L
Sbjct: 467 TNNQLTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFELA 526
Query: 150 GLTKLQVFNMDFNQIT 165
+KL + +++ +T
Sbjct: 527 LCSKLSIMSIENCPLT 542
>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 428
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N T+L + L +L L+L +NRLK+L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L +NR+T L + L LQ + NQ+T + R E L NL
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR-ESGKLGNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +NQ+T++ + L L L L NQLT L +I LK L+T++LS N++
Sbjct: 166 QELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT-LFKEIEQLKNLQTLNLSDNQL 221
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L + L +L L+L++N+L +L + G L LQ L + NQL L
Sbjct: 119 LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L LQ N+ NQ+T + E L NL ++
Sbjct: 179 PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPI-EIGKLQNLHTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +NQ+ + + L L L LS NQLT + +I L+ L T++LS N++
Sbjct: 238 NLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPI-EIGKLQNLHTLNLSGNQL 290
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L+ L L++N+L L ++G L L L + NQL L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + N++T+L + L LQ N+ NQ+T + + E + L NL ++
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSK-EIEQLKNLQTL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
SL N++ + + L L L L +NQLT + +I L+ L+T+ L N++ F
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPI-EIGQLQNLQTLSLYKNRLMTF 385
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L+ + L +L L L+ NRL L ++G L LQ L + NQL AL
Sbjct: 303 LQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTAL 362
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
P +I L +L NR+ + + L LQ
Sbjct: 363 PIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTL 398
>gi|73669930|ref|YP_305945.1| hypothetical protein Mbar_A2449 [Methanosarcina barkeri str.
Fusaro]
gi|72397092|gb|AAZ71365.1| hypothetical protein Mbar_A2449 [Methanosarcina barkeri str.
Fusaro]
Length = 886
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
LI L L N N+ + PP I ++L + N+LT L ++ L +LN L L+ N
Sbjct: 18 LIVLYLDNYNLAEV-----PPEIGRLENLKELDLYDNDLTELTPKIKELKNLNELNLSRN 72
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
L L ++G L KL L + NQL LP +I+ L + N++T L + L K
Sbjct: 73 HLTLLPPEIGELGKLTKLYLFYNQLIKLPPEIRKLKNLTEIDLTGNQLTLLPSEIGELGK 132
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L F++ N++ + E L NL+ + + NNQ+T + + L L L L HN L E
Sbjct: 133 LTKFSLYHNKLAQL-PPEIGKLENLEELDISNNQLTQLPPEIGKLRNLVKLSLCHNNLEE 191
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
L +I L +L+ +D+SYN +
Sbjct: 192 -LPPEISELTKLKQLDISYNPL 212
>gi|357627630|gb|EHJ77268.1| putative shoc2 [Danaus plexippus]
Length = 567
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +++TSL ++R LT L +L N+L +L + G L+ LQ L + +N L +L
Sbjct: 88 VKRLDLSKSSITSLPPNVRDLTHLVEFYLYGNKLVALPAEFGCLTNLQTLALNENSLTSL 147
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + L L +N+++ + ++ LT L + FN+I +V D NL NL +
Sbjct: 148 PDSLAHLRSLKVLDLRHNKLSDIPEVVYKLTSLTTLFLRFNRIRVV-GDGIANLTNLTML 206
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I ++S + L L +SHN L E L +I L T+DL +N++
Sbjct: 207 SLRENKIKELSSGIGKLVNLVTFDVSHNHL-EHLPQEIGNCVNLSTLDLQHNEL 259
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N L L + ++ L +L L L+NN LK + +G L KL++L +E+N++E LP+
Sbjct: 392 ELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKRIPPSIGNLRKLRVLDLEENKIEILPN 451
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I +L L +N++TSL + L L ++ N + + +E L NL+S+ L
Sbjct: 452 EIGFLQELKKLIVQSNQLTSLPRSIGHLINLTYLSVGENNLQYL-PEEIGTLENLESLYL 510
Query: 184 QNN 186
+N
Sbjct: 511 NDN 513
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
+L L + N L SL +GT + + L + NQL LP DIQ L L +NN +
Sbjct: 366 NLTKLIMKENLLTSLPLDIGTWTNMVELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKR 425
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ + L KL+V +++ N+I ++ +E L L + +Q+NQ+TS+ S+ L L Y
Sbjct: 426 IPPSIGNLRKLRVLDLEENKIEIL-PNEIGFLQELKKLIVQSNQLTSLPRSIGHLINLTY 484
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L + N L ++L ++I L+ L ++ L+ N
Sbjct: 485 LSVGENNL-QYLPEEIGTLENLESLYLNDN 513
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 9/202 (4%)
Query: 45 LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LV +++H H P I L + N L + +++ L LN + L NRL ++
Sbjct: 226 LVTFDVSHNHLEHLPQEIGNCVNLSTLDLQHNELLDIPDTIGNLQALNRIGLRYNRLNAI 285
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLRGLTKLQV 156
L + +E N + LP + ++L SL + N S G T +
Sbjct: 286 PASLSNCKHMDEFNVEGNSISQLPDGLLCSLTELTSLTLSRNSFMSYPSGGPAQFTSVSS 345
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
N++ NQI + F NL + ++ N +TS+ + T + L L NQL + L
Sbjct: 346 INLEHNQIDKIPYGIFSRAKNLTKLIMKENLLTSLPLDIGTWTNMVELNLGTNQLVK-LP 404
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
DDI+ L L + LS N + +
Sbjct: 405 DDIQSLINLEVLILSNNLLKRI 426
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D L +L L L +N ++ I E + T + L + FN + + + + LT+L L L
Sbjct: 149 DSLAHLRSLKVLDLRHNKLSDIPEVVYKLTSLTTLFLRFNRIRVVGDGIANLTNLTMLSL 208
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-----------------QLFSQLGS 133
N++K L +G L L + N LE LP +I + +G+
Sbjct: 209 RENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLSTLDLQHNELLDIPDTIGN 268
Query: 134 LYANN------NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
L A N NR+ ++ L + FN++ N I+ + +L L S++L N
Sbjct: 269 LQALNRIGLRYNRLNAIPASLSNCKHMDEFNVEGNSISQLPDGLLCSLTELTSLTLSRNS 328
Query: 188 ITSMNS-SLSGLTKLAYLYLSHNQLTEF 214
S S + T ++ + L HNQ+ +
Sbjct: 329 FMSYPSGGPAQFTSVSSINLEHNQIDKI 356
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTI---RKLHV---GFNNLTSLNNSLRGLTDL 85
DD++ L L+L NN + I PP+I RKL V N + L N + L +L
Sbjct: 405 DDIQSLINLEVLILSNNLLKRI-----PPSIGNLRKLRVLDLEENKIEILPNEIGFLQEL 459
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSL 144
L + +N+L SL +G L L L + +N L+ LP +I L SLY N+N + +L
Sbjct: 460 KKLIVQSNQLTSLPRSIGHLINLTYLSVGENNLQYLPEEIGTLENLESLYLNDNPNLCNL 519
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRD 170
L LQ+ +++ +T + D
Sbjct: 520 PFELALCVSLQIMSIENCPLTSLPPD 545
>gi|410087784|ref|ZP_11284485.1| hypothetical protein C790_1943 [Morganella morganii SC01]
gi|409765778|gb|EKN49881.1| hypothetical protein C790_1943 [Morganella morganii SC01]
Length = 291
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
Query: 47 NNNITHIHENAFPPTIRKLHVGFNN-LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
N T I PP R++ +NN L+ +LR T L L L+ N+L + + L
Sbjct: 16 NGGYTSIDAFITPPYTRQVISAYNNQLSEYPAALRHCTSLRVLNLSCNQLAYIPPDIAQL 75
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ ++L + N + +P +I QL LY + N +SL GL L+ FN NQ+T
Sbjct: 76 TACEMLDLGHNCIADVPPEIGELHQLQYLYLSENGYSSLPLSFSGLKNLRYFNATDNQLT 135
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ F + ++ I L NN+IT ++S++SGL ++L +N++T + D+I + L
Sbjct: 136 AIPA-WFSEMEKMEEIRLYNNRITELSSAVSGLKNTREMHLMNNKITA-VPDEIAAVAAL 193
Query: 226 RTVDLSYNKI 235
+DL+ N++
Sbjct: 194 EILDLNNNRV 203
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R + N LT++ + + + L NNR+ L + L + + + N++ A+
Sbjct: 124 LRYFNATDNQLTAIPAWFSEMEKMEEIRLYNNRITELSSAVSGLKNTREMHLMNNKITAV 183
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I + L L NNNR+ + + L +L N+ FN + + + + L +L +
Sbjct: 184 PDEIAAVAALEILDLNNNRVAFISPEISRLQQLNTLNLRFNALKALPENTGE-LSSLLYL 242
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L+ NQ++++ SL+ LT+L L L N +
Sbjct: 243 DLRANQLSTLPDSLAALTQLRKLDLRWNNFS 273
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R++H+ N +T++ + + + L L LNNNR+ + ++ L +L L + N L+ALP
Sbjct: 171 REMHLMNNKITAVPDEIAAVAALEILDLNNNRVAFISPEISRLQQLNTLNLRFNALKALP 230
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
+ S L L N++++L L LT+L+ ++ +N +++
Sbjct: 231 ENTGELSSLLYLDLRANQLSTLPDSLAALTQLRKLDLRWNNFSVI 275
>gi|124003273|ref|ZP_01688123.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123991371|gb|EAY30802.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 302
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 109/191 (57%), Gaps = 3/191 (1%)
Query: 48 NNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N +T I E T +++L++ N + +L S+ L L L + N L+ L +GT+
Sbjct: 97 NKLTDIPEGIGKLTQLKRLNLAKNKIKALPTSIGQLKKLRLLHMMINHLEQLPESMGTMQ 156
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
LQ+L ++ NQL++LP+ + +L + N I++L L LT+L N++ NQI
Sbjct: 157 NLQVLELDYNQLKSLPAALGKLQKLRLISVGYNHISALPAQLYQLTQLHKLNLEHNQIKE 216
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+++D Q + NL+++ L NN +T + S++ L+K+ L LS+N++ + ++ +K LR
Sbjct: 217 LKKDIGQ-MKNLNALILSNNHLTQLPESITQLSKMELLVLSNNKIAT-MPAHLKKMKGLR 274
Query: 227 TVDLSYNKINK 237
T+ L N ++K
Sbjct: 275 TLILVGNPLSK 285
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 2/179 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P ++ L++ N LT + S+ L++L L + N+L + +G L++L+ L + +N+++
Sbjct: 64 PQLKFLNLMKNKLTQWHPSIFTLSELEVLNIRQNKLTDIPEGIGKLTQLKRLNLAKNKIK 123
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
ALP+ I +L L+ N + L + + LQV +D+NQ+ + L L
Sbjct: 124 ALPTSIGQLKKLRLLHMMINHLEQLPESMGTMQNLQVLELDYNQLKSL-PAALGKLQKLR 182
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
IS+ N I+++ + L LT+L L L HNQ+ E L DI +K L + LS N + +
Sbjct: 183 LISVGYNHISALPAQLYQLTQLHKLNLEHNQIKE-LKKDIGQMKNLNALILSNNHLTQL 240
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L L L +L L N+L + TLS+L++L I QN+L +P I +QL L
Sbjct: 60 LDKLPQLKFLNLMKNKLTQWHPSIFTLSELEVLNIRQNKLTDIPEGIGKLTQLKRLNLAK 119
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
N+I +L + L KL++ +M N + + + + NL + L NQ+ S+ ++L L
Sbjct: 120 NKIKALPTSIGQLKKLRLLHMMINHLEQL-PESMGTMQNLQVLELDYNQLKSLPAALGKL 178
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
KL + + +N ++ L + L +L ++L +N+I +
Sbjct: 179 QKLRLISVGYNHISA-LPAQLYQLTQLHKLNLEHNQIKEL 217
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 61/113 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R + VG+N++++L L LT L+ L L +N++K L+ +G + L L++ N L L
Sbjct: 181 LRLISVGYNHISALPAQLYQLTQLHKLNLEHNQIKELKKDIGQMKNLNALILSNNHLTQL 240
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
P I S++ L +NN+I ++ L+ + L+ + N ++ +D N
Sbjct: 241 PESITQLSKMELLVLSNNKIATMPAHLKKMKGLRTLILVGNPLSKDEKDRILN 293
>gi|421130600|ref|ZP_15590794.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410358299|gb|EKP05480.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 258
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N LT+L + L DL L L NN+L +L ++ L KLQ+L + NQL
Sbjct: 36 PMDVRTLDLSKNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQL 95
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+P +I +L LY NN++T+L + L KLQ + NQ+T + + E L L
Sbjct: 96 TTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLKKLQELYLINNQLTTLPK-EIGYLKKL 154
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+T++ + L +L L L NQLT L +I L++L + L N+ F
Sbjct: 155 QELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTT-LPKEIGKLQKLEKLYLKNNQFTTF 213
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 20/232 (8%)
Query: 1 MSRFSYFEDGHAVALNLIDLEP-ETGSHPLTSDDLKGTPALITLL-------LVNNNITH 52
+S+ E GH LN P + + L+ + L P I L L NN +T
Sbjct: 15 LSQLKAEEKGHYHNLNKALQNPMDVRTLDLSKNQLTTLPKEIEYLKDLESLDLRNNQLTT 74
Query: 53 I-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
+ E + ++ L + N LT++ + L L L+L NN+L +L ++G L KLQ L
Sbjct: 75 LPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLKKLQEL 134
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQL LP +I +L LY NN++T+L + L +L + ++ NQ+T + + E
Sbjct: 135 YLINNQLTTLPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPK-E 193
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
L L+ + L+NNQ T+ + L KL L LDDI LK
Sbjct: 194 IGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLN----------LDDIPALK 235
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
LN +L+ D+ L L+ N+L +L ++ L L+ L + NQL LP +I+ +L L
Sbjct: 29 LNKALQNPMDVRTLDLSKNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVL 88
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
N+N++T++ + L KLQ + NQ+T + + E L L + L NNQ+T++
Sbjct: 89 DLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPK-EIGYLKKLQELYLINNQLTTLPKE 147
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL LYL +NQLT L +I L+ L +DL N++
Sbjct: 148 IGYLKKLQELYLINNQLTT-LPKEIGYLEELWLLDLRKNQL 187
>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
Length = 400
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L N + L +L L+L+ N+LK+L ++G L L++L + NQL
Sbjct: 45 PLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
LP +I L LY N N++T L G L+ L +L +FN NQ+ M E L
Sbjct: 105 TTLPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFN---NQL-MTLPKEIGQL 160
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL ++ L NNQ+T++ + L L L++NQLT L ++I LK L+ ++L+ N++
Sbjct: 161 KNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTT-LPEEIGKLKNLQVLELNNNQL 219
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L N + L +L L L NN+L +L ++G L LQ L + NQL L
Sbjct: 117 LQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLWNNQLTTL 176
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L NNN++T+L + L LQV ++ NQ+T + + E L NL +
Sbjct: 177 PKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPK-EIGQLKNLQWL 235
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NQ T + + L L L+L NQ + + +I LK L+ + L N+
Sbjct: 236 DLGYNQFTILPEEIGKLKNLQVLHLHDNQF-KIIPKEIGKLKNLQVLHLHDNQ 287
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L TL L NN +T P I +L + N LT+L + L +L L LNNN
Sbjct: 163 LQTLYLWNNQLT-----TLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNN 217
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L +L ++G L LQ L + NQ LP +I L L+ ++N+ + + L
Sbjct: 218 QLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKN 277
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
LQV ++ NQ ++ + E L NL +SL NQ + + L L +L L NQLT
Sbjct: 278 LQVLHLHDNQFKIIPK-EIGKLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTT 336
Query: 214 FLLDDIRGLKRLRTVDLSYNK 234
L +I L+ L+ + LSYN+
Sbjct: 337 -LPKEIEQLQNLQELYLSYNQ 356
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G+N T L + L +L L L++N+ K + ++G L LQ+L + NQ + +P +
Sbjct: 235 LDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKE 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L N+ + + L LQ N+D NQ+T + + E + L NL + L
Sbjct: 295 IGKLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPK-EIEQLQNLQELYLS 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
NQ ++ + L L LYL+++QL+ + IR L
Sbjct: 354 YNQFKTLPKEIGQLKNLKKLYLNNHQLSSEEKERIRKL 391
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +++ D+ L L+ +LK+L ++ L LQ L + NQL+ LP +I L L
Sbjct: 38 LTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVL 97
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++T+L + L LQ +++NQ+T++ +E L NL + L NNQ+ ++
Sbjct: 98 ELIHNQLTTLPKEIGRLQNLQELYLNYNQLTIL-PNEIGQLKNLQRLHLFNNQLMTLPKE 156
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L LYL +NQLT L +I LK L+ +L+ N++
Sbjct: 157 IGQLKNLQTLYLWNNQLTT-LPKEIGQLKNLQVFELNNNQL 196
>gi|425460335|ref|ZP_18839816.1| Leucine-rich-repeat protein (fragment) [Microcystis aeruginosa PCC
9808]
gi|389826964|emb|CCI22115.1| Leucine-rich-repeat protein (fragment) [Microcystis aeruginosa PCC
9808]
Length = 834
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ N ++ + +L LT L L L NN+++ + L+ LQ L
Sbjct: 31 IPPEIAQLTSLQYLNLSNNQISEIPEALAHLTSLQHLNLYNNQIREIPEAFAHLTSLQFL 90
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ+ +P + + L LY NN+I+ + L LT LQ + NQI + +
Sbjct: 91 DLGHNQISEIPEALAYLTSLQGLYLRNNQISEIPEALTHLTSLQELYLYNNQIREI-PEA 149
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
+L +L S+ L+NNQI + +L+ LT L YLYLS+NQ++E
Sbjct: 150 LSHLTSLQSLDLRNNQIREIPEALAHLTSLQYLYLSNNQISE 191
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 45 LVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L NN I I E A +++ L +G N ++ + +L LT L L+L NN++ + L
Sbjct: 69 LYNNQIREIPEAFAHLTSLQFLDLGHNQISEIPEALAYLTSLQGLYLRNNQISEIPEALT 128
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L+ LQ L + NQ+ +P + + L SL NN+I + L LT LQ + NQ
Sbjct: 129 HLTSLQELYLYNNQIREIPEALSHLTSLQSLDLRNNQIREIPEALAHLTSLQYLYLSNNQ 188
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
I+ + +L NL + LQNN IT++ +
Sbjct: 189 ISET-PEALAHLVNLKRLVLQNNPITNVPPEI 219
>gi|260804081|ref|XP_002596917.1| hypothetical protein BRAFLDRAFT_76418 [Branchiostoma floridae]
gi|229282178|gb|EEN52929.1| hypothetical protein BRAFLDRAFT_76418 [Branchiostoma floridae]
Length = 660
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 118/220 (53%), Gaps = 8/220 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSL-NNSLRGLTDL 85
LT+D L G ++ L L +N+I I E AF PT R L++ NNL S+ + GL +L
Sbjct: 115 LTADMLVGLGNMVYLDLSSNHIASIAEGAFTPTPRLQYLYMHQNNLKSIPQHVFDGLNEL 174
Query: 86 NWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITS 143
+L++++N + + L +L +L L + N++ +P + QL L+ N+N+ITS
Sbjct: 175 LYLWVHDNHINAILSDTFASLQQLVELHLYNNEISTIPQRAFVNLPQLQQLFLNSNKITS 234
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL--SGLTK 200
+ G L L +LQV +D N++ V ++ NL + LQNNQ+ S+ + + + L +
Sbjct: 235 IQSGALSNLPQLQVLRLDDNKLQTVSLGLLGDMENLQELHLQNNQLISIPTDIVQNYLLE 294
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L +LYL N +T+ +L T+DL N+I+
Sbjct: 295 LTHLYLYDNSITDIPDLAFSNHPKLTTLDLHTNRISTVSA 334
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 61 TIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQL 118
+I +L++ N +T+++ S +L L+LNNN + ++ Q S L L + QNQL
Sbjct: 53 SITELYLSHNLITTISQSDFSRYRNLRKLYLNNNPISTIGHQAFYYQSSLTNLDLHQNQL 112
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+L +D +L GL + ++ N I + F L
Sbjct: 113 TSLTAD----------------------MLVGLGNMVYLDLSSNHIASIAEGAFTPTPRL 150
Query: 179 DSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ + N + S+ + GL +L YL++ N + L D L++L + L N+I+
Sbjct: 151 QYLYMHQNNLKSIPQHVFDGLNELLYLWVHDNHINAILSDTFASLQQLVELHLYNNEIST 210
Query: 238 FGTR 241
R
Sbjct: 211 IPQR 214
>gi|340367867|ref|XP_003382474.1| PREDICTED: leucine-rich repeat-containing protein 1-like
[Amphimedon queenslandica]
Length = 470
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
L ++ ++I H+ +F +R+L + NNLTSL N + L+ LN L + NNR+ SL +
Sbjct: 182 LAMIPSSICHL---SF---LRELDLKNNNLTSLPNEIGSLSLLNILCVTNNRISSLPSSI 235
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L L+ L + N+L LPS+I L L LY +N++ SL L KL+ +DF+
Sbjct: 236 GKLRNLEELTLHSNELAHLPSEICLLKDLKLLYCGDNKLQSLPDQFGKLVKLE--ELDFS 293
Query: 163 QITMVRRDE-FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+V+ E F N +L + L NN++ + + L L L++ N++ F
Sbjct: 294 GCELVKLPESFSNCKSLIRVWLCNNRLVQLPVQIGNLVNLKELHVRKNKIRMF 346
>gi|418755378|ref|ZP_13311585.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964389|gb|EKO32279.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 277
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 25 GSHPLTSDDLK-GTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
G +PLTS + GT + L + T E + +L + N L + L
Sbjct: 47 GHYPLTSLPQEIGTLQRLERLDLEKLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIGTLQ 106
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L WL L +N+ +L ++G L KL+ L + NQL LP++I L LY +NN++TS
Sbjct: 107 RLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTS 166
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L + L LQ ++ +NQ+ + + E L NL+ + L +NQ+ ++ + L KL
Sbjct: 167 LPQEINKLRNLQYLDLFYNQLGNLPK-EIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGE 225
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LS NQL L +I L++L +DL+ N++ K
Sbjct: 226 LELSGNQLRS-LPQEIGKLRKLEKLDLTSNQLVKL 259
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ N LTSL + L +L +L L N+L +L ++G L L+ L + NQL
Sbjct: 153 SLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGN 212
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
LP +I +LG L + N++ SL + L KL+ ++ NQ+ + ++
Sbjct: 213 LPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQE 262
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNN 92
+L L L NN +T + P I KL + +N L +L + L +L WL L +
Sbjct: 153 SLKRLYLSNNQLT-----SLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGS 207
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N+L +L ++G L KL L + NQL +LP +I +L L +N++ L + L
Sbjct: 208 NQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQ 267
Query: 153 KLQV 156
+L+
Sbjct: 268 RLRA 271
>gi|418744910|ref|ZP_13301255.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794241|gb|EKR92151.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 281
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 25 GSHPLTSDDLK-GTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
G +PLTS + GT + L + T E + +L + N L + L
Sbjct: 47 GHYPLTSLPQEIGTLQRLERLDLEKLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIGTLQ 106
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L WL L +N+ +L ++G L KL+ L + NQL LP++I L LY +NN++TS
Sbjct: 107 RLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTS 166
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L + L LQ ++ +NQ+ + + E L NL+ + L +NQ+ ++ + L KL
Sbjct: 167 LPQEINKLRNLQYLDLFYNQLGNLPK-EIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGE 225
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LS NQL L +I L++L +DL+ N++ K
Sbjct: 226 LELSGNQLRS-LPQEIGKLRKLEKLDLTSNQLVKL 259
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ N LTSL + L +L +L L N+L +L ++G L L+ L + NQL
Sbjct: 153 SLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGN 212
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
LP +I +LG L + N++ SL + L KL+ ++ NQ+ + ++
Sbjct: 213 LPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQE 262
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNN 92
+L L L NN +T + P I KL + +N L +L + L +L WL L +
Sbjct: 153 SLKRLYLSNNQLT-----SLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGS 207
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N+L +L ++G L KL L + NQL +LP +I +L L +N++ L + L
Sbjct: 208 NQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQ 267
Query: 153 KLQV 156
+L+
Sbjct: 268 RLRA 271
>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 400
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT L + L +L L+L++N+LK+L ++G L LQ L + NQL L
Sbjct: 186 LQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTL 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L LY N +T+L + L L++ ++ +NQ ++ +E + L NL ++
Sbjct: 246 PNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKII-PNEIEQLQNLRTL 304
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ T++ + L L L+L++NQL + L ++I L+ L+ +DL+ N++
Sbjct: 305 RLRNNQFTALPKEIRQLQNLQVLFLNNNQL-KTLPNEIEKLQNLQVLDLNDNQL 357
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N LT+L N + L +L L+L N L +L ++G L L++L + NQ + +
Sbjct: 232 LQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKII 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I+ L +L NN+ T+L +R L LQV ++ NQ+ + +E + L NL +
Sbjct: 292 PNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTL-PNEIEKLQNLQVL 350
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L +NQ+ ++ + + L L L L +N+L+ + IR L
Sbjct: 351 DLNDNQLKTLPNEIEKLQNLQVLDLRNNELSSEEKERIRKL 391
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ D+ L L+ +LK+L ++G L LQ L + NQL LP++I L
Sbjct: 36 TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQ 95
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
+L + N++T+L + L LQ ++ NQ+ ++ + E L NL + L NNQ+ +
Sbjct: 96 TLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPK-EINQLQNLRVLGLSNNQLKILP 154
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L L L L NQL + L ++I LK L+T+DLS N
Sbjct: 155 KEIGQLENLQTLDLYTNQL-KALPNEIGQLKNLQTLDLSKN 194
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L+L NN+L +L ++G L LQ L ++ NQL
Sbjct: 45 PLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP++I L +L +N++ L + L L+V + NQ+ ++ + E L NL
Sbjct: 105 TTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPK-EIGQLENL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L NQ+ ++ + + L L L LS N LT L +I LK LR + LS N++
Sbjct: 164 QTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILT-ILPKEIGQLKNLRELYLSSNQL 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L L + L +L L L N+LK+L ++G L LQ L + +N L L
Sbjct: 140 LRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTIL 199
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY ++N++ +L + L LQ ++ NQ+T + +E L NL +
Sbjct: 200 PKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTL-PNEIGQLKNLYEL 258
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L N +T++ + L L L L +NQ + + ++I L+ LRT+ L N+
Sbjct: 259 YLGKNLLTTLPKEVGQLKNLKMLDLGYNQF-KIIPNEIEQLQNLRTLRLRNNQ 310
>gi|345491080|ref|XP_001606143.2| PREDICTED: slit homolog 1 protein-like [Nasonia vitripennis]
Length = 1585
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 112/237 (47%), Gaps = 31/237 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDL 85
L+SD L P L +L L N I HI A P++RKL++GFN LT++ + GLT L
Sbjct: 548 LSSDSL-ALPLLRSLDLSANGIEHIPAGALSGLPSLRKLNLGFNALTAVEDGCFEGLTRL 606
Query: 86 NWLFLNNNRLKSLEGQLGTLS-------------------------KLQLLVIEQNQLEA 120
L L NR+ L+G+ +LQ L I +N L
Sbjct: 607 EQLDLKYNRIGQLQGRCFRPLRSLLDLSLRGNRLEVIRPDVFQDNMRLQKLDISRNNLAQ 666
Query: 121 LPSDIQLFS-QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P F+ +L LYA++N + L L GL +LQ+ ++ FNQ+ + + +L NL
Sbjct: 667 IPHATFTFTRELRELYASHNALPELPSSLHGLEQLQILDLSFNQLQALAPETLSSLTNLL 726
Query: 180 SISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N+I + + L +LA + L +N L + +R L L+ + L N+I
Sbjct: 727 ELKLVRNRIRELREGAFDRLPRLALVDLENNDLALVERNAVRALPELQALRLGKNRI 783
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 48 NNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGT 104
NN+ I F T +R+L+ N L L +SL GL L L L+ N+L++L + L +
Sbjct: 662 NNLAQIPHATFTFTRELRELYASHNALPELPSSLHGLEQLQILDLSFNQLQALAPETLSS 721
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLY----ANNNRITSLDGLLRGLTKLQVFNMD 160
L+ L L + +N++ L F +L L NN+ +R L +LQ +
Sbjct: 722 LTNLLELKLVRNRIRELREGA--FDRLPRLALVDLENNDLALVERNAVRALPELQALRLG 779
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
N+I M+ F L L S LQ N+I + ++ + L +L LSHN LT +
Sbjct: 780 KNRIQMIPSGAFSELPMLQSAELQENRIHEIAGNAFINVPHLLFLNLSHNLLTSLEHMGL 839
Query: 220 RGLKRLRTVDLSYNKINKFGTRN 242
L+ L +DLS N+I + + +
Sbjct: 840 ESLRSLEVLDLSDNRITRVSSES 862
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 17/213 (7%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNR 94
P++ L L N I + E +F P + +L + FN +T + + + + L L LN+NR
Sbjct: 262 PSVSVLQLDRNRIVRLGEGSFVDLPILARLSMSFNRITEIFPGAFQRVPQLRTLNLNHNR 321
Query: 95 L----------KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
+ +S EG L ++ L+ + + + + S ++ +L L A+ N+I +
Sbjct: 322 IHRIHPEFFPQRSREGN--GLEEIWLMDNDISHVSEIRSVLEALPRLKFLEASFNQIQEI 379
Query: 145 D-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSLSGLTKLA 202
G LRG + L+ ++D+N+++ ++RD F + L + L+NN +T S ++ L L
Sbjct: 380 QYGALRGHSSLERLHLDYNRLSFLQRDVFGGMPALRELRLRNNSLTNSPDAPFWDLPALK 439
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS N + L LR +DLS N I
Sbjct: 440 GLDLSGNFFRHIEPRLLANLPSLRRLDLSENAI 472
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLK 96
L+ L LV N I + E AF P + + + N+L + N++R L +L L L NR++
Sbjct: 725 LLELKLVRNRIRELREGAFDRLPRLALVDLENNDLALVERNAVRALPELQALRLGKNRIQ 784
Query: 97 SLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLDGL-LRGLTK 153
+ G L LQ +++N++ + + + L L ++N +TSL+ + L L
Sbjct: 785 MIPSGAFSELPMLQSAELQENRIHEIAGNAFINVPHLLFLNLSHNLLTSLEHMGLESLRS 844
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLT 212
L+V ++ N+IT V + + L + + NN+I ++ S + +L L L N++
Sbjct: 845 LEVLDLSDNRITRVSSESLAAMEWLVELKMDNNRICAIQGSPFDDMPRLRVLSLRSNRMA 904
Query: 213 EFLLDDIRGLKRLRT 227
+ KRLR+
Sbjct: 905 SVSEN---AFKRLRS 916
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 131 LGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEF----QNLHNLDSISLQN 185
L L + NRIT + G + + +L+ N++ N+I + + F + + L+ I L +
Sbjct: 288 LARLSMSFNRITEIFPGAFQRVPQLRTLNLNHNRIHRIHPEFFPQRSREGNGLEEIWLMD 347
Query: 186 NQIT---SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
N I+ + S L L +L +L S NQ+ E +RG L + L YN+++
Sbjct: 348 NDISHVSEIRSVLEALPRLKFLEASFNQIQEIQYGALRGHSSLERLHLDYNRLS 401
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 51 THIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT--------DLNWLFLNNNRLKSLEGQL 102
T E PP + L ++ + L L GL ++ L L NN L SL G +
Sbjct: 30 TGAQEYGCPPQEKILPCRCSH-SELPRVLEGLKAVSRYVSHPVDELILENNNLPSLPGHV 88
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMD 160
++ L++ N+LE R++S L+GL L +L + D
Sbjct: 89 FASLRVLRLMLRNNRLE--------------------RVSSGWLEGLHDSLLELFLVEPD 128
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
+ + D +NL L++++LQ+ + + S SGL+KL YL ++ L E + R
Sbjct: 129 LRSLPI---DSLENLQGLEAVTLQSKLMKRL-PSFSGLSKLRYLQINSPGLLELTPRNFR 184
Query: 221 GLKRL 225
L L
Sbjct: 185 DLPSL 189
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 33/193 (17%)
Query: 77 NSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVI-EQNQLEALPSDIQLFSQLGSLY 135
+SL L L + L + +K L G LSKL+ L I LE P + + L L+
Sbjct: 135 DSLENLQGLEAVTLQSKLMKRLPSFSG-LSKLRYLQINSPGLLELTPRNFRDLPSLEQLH 193
Query: 136 A-NNNRITSLD-GLLRGLTKLQVFNMD---------------------------FNQITM 166
+ ++ L+ GLLR L +LQ+ N+ TM
Sbjct: 194 VFGSPKLARLEAGLLRDLPRLQLINVSDCGLHWMHPRALINLSELKEIAFVGNSIQDATM 253
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
V R +L ++ + L N+I + S L LA L +S N++TE + + +L
Sbjct: 254 VGR-ALMDLPSVSVLQLDRNRIVRLGEGSFVDLPILARLSMSFNRITEIFPGAFQRVPQL 312
Query: 226 RTVDLSYNKINKF 238
RT++L++N+I++
Sbjct: 313 RTLNLNHNRIHRI 325
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 120/317 (37%), Gaps = 108/317 (34%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAF---P-----------------------PTI 62
L D G PAL L L NN++T+ + F P P++
Sbjct: 403 LQRDVFGGMPALRELRLRNNSLTNSPDAPFWDLPALKGLDLSGNFFRHIEPRLLANLPSL 462
Query: 63 RKL----------------------HVGF--NNLTSLNN-SLRGLTDLNWLFLNNNRLKS 97
R+L HV N L+ L+ + R LT+L L + NRL
Sbjct: 463 RRLDLSENAIALVEPDAFLNSPALEHVNMSGNALSVLHPMTFRHLTNLYELDVGWNRL-- 520
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQ-------------------------LFSQLG 132
LE G ++ L + N++ ALP+ + S L
Sbjct: 521 LEIIPGLPRNIEHLHLPMNRIVALPTSLSSDSLALPLLRSLDLSANGIEHIPAGALSGLP 580
Query: 133 SLYANN---NRITSL-DGLLRGLTKLQVFNMDFNQI------------------------ 164
SL N N +T++ DG GLT+L+ ++ +N+I
Sbjct: 581 SLRKLNLGFNALTAVEDGCFEGLTRLEQLDLKYNRIGQLQGRCFRPLRSLLDLSLRGNRL 640
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LAYLYLSHNQLTEFLLDDIRGLK 223
++R D FQ+ L + + N + + + T+ L LY SHN L E L + GL+
Sbjct: 641 EVIRPDVFQDNMRLQKLDISRNNLAQIPHATFTFTRELRELYASHNALPE-LPSSLHGLE 699
Query: 224 RLRTVDLSYNKINKFGT 240
+L+ +DLS+N++
Sbjct: 700 QLQILDLSFNQLQALAP 716
>gi|124004758|ref|ZP_01689602.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123989881|gb|EAY29410.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 204
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N+L L + L++L L L +NRL L +G L++L+ L + N+L LP D+ F+
Sbjct: 22 NHLAVLPTGINKLSELRVLDLEDNRLTKLPINIGNLTQLKYLNLSDNELTTLPEDVGNFT 81
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
QL LY + N++ +L + LT+LQV ++ FNQ+ +V + +L L I L NNQ+T
Sbjct: 82 QLQELYLSENQLVTLPESICKLTRLQVLDLSFNQL-IVLPENIGDLSLLKDIELGNNQLT 140
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ S+ L + L LS+N LT L + L +LR + L N I
Sbjct: 141 SLPDSIESLKMIGRLDLSNNCLTT-LPKGLSKLPQLRELVLISNPI 185
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 24/150 (16%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + T L L+L+ N+L +L + L++LQ+L + NQL L
Sbjct: 60 LKYLNLSDNELTTLPEDVGNFTQLQELYLSENQLVTLPESICKLTRLQVLDLSFNQLIVL 119
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I S L + NN++TSL D ++L + +
Sbjct: 120 PENIGDLSLLKDIELGNNQLTSLP------------------------DSIESLKMIGRL 155
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NN +T++ LS L +L L L N +
Sbjct: 156 DLSNNCLTTLPKGLSKLPQLRELVLISNPI 185
>gi|432858934|ref|XP_004069011.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Oryzias latipes]
Length = 1022
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 25/201 (12%)
Query: 42 TLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-G 100
TL L NN IT + + FP ++ + L+L+NN++ LE G
Sbjct: 138 TLDLSNNEITELRGHCFPAGLQ---------------------IRDLYLSNNKISVLELG 176
Query: 101 QLGTL-SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFN 158
L L S LQ+L + +N++ +P +L L N NRI ++GL +GL+ L+V
Sbjct: 177 ALDRLGSSLQVLRLSRNRISQIPIRAFQLPRLTQLELNRNRIRQIEGLTFQGLSSLEVLK 236
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLD 217
+ N I+ + F +L + + L+ N +T +NS SL GLT L L+LS+N + D
Sbjct: 237 LQRNSISKLTDGAFWDLAKMKVLHLEYNNLTEVNSGSLYGLTSLTQLFLSNNSIARINPD 296
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
++ +RLR ++LSYN + +
Sbjct: 297 GLKFCQRLRELNLSYNNLTRL 317
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFL 90
+G +L L L N+I+ + + AF ++ LH+ +NNLT +N+ SL GLT L LFL
Sbjct: 226 FQGLSSLEVLKLQRNSISKLTDGAFWDLAKMKVLHLEYNNLTEVNSGSLYGLTSLTQLFL 285
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLR 149
+NN + + P ++ +L L + N +T LD G L
Sbjct: 286 SNNSIARIN----------------------PDGLKFCQRLRELNLSYNNLTRLDEGSLA 323
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM----NSSLSGLTKLAYLY 205
L L + N I+ + F+ L + + L +N I+ N + SGL +L L
Sbjct: 324 MLGDLHTLRLGHNSISQINEGAFRGLKAVRILELDHNDISGTIEDTNGAFSGLDRLNKLT 383
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++ + GL+ L ++L N I
Sbjct: 384 LFGNKIKSVAKEAFSGLESLEHLNLGENPI 413
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
N+ N++T + + F +L NL + L +N++TS+ +++ LYL HN +
Sbjct: 68 LNLGHNKLTSINPEAFASLPNLRELHLDHNELTSIPDLGHFASRIVSLYLHHNNIRSIDG 127
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
IR L + T+DLS N+I +
Sbjct: 128 RRIRELVSVETLDLSNNEITEL 149
>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 356
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L ++ L +L L L NN+ K+L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ LP +I L +L + NR+T+ + L LQ N+D+NQ+T + + E L +L
Sbjct: 107 KNLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQ-EIGQLQSL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L N++ ++ + + L L LYLS+NQLT L ++I LK L+ + L N++
Sbjct: 166 QKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLT-ILPEEIGQLKNLQALILGDNQL 221
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++KL++ N L +L N + L +L L+L+NN+L L ++G L LQ L++ NQL
Sbjct: 164 SLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTI 223
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L LY+ NN +T L + L KLQ + NQ+T + + E L NL
Sbjct: 224 LPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPK-EIGQLENLQE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +NQ+T++ + L L +NQLT L ++I L+ L+ + L+ N++
Sbjct: 283 LYLNDNQLTTLPKEIGQLKNLQTFISFNNQLT-MLPNEIGQLQNLQWLKLNNNQL 336
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 39 ALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
+L TL+L N +T FP I +KL++ +N LT+L + L L L L+
Sbjct: 118 SLQTLILSVNRLT-----TFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDK 172
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
NRLK+L ++G L LQ L + NQL LP +I L +L +N++T L + L
Sbjct: 173 NRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L++ N++T++ + E L L + L +NQ+T++ + L L LYL+ NQLT
Sbjct: 233 NLKLLYSVNNELTILPQ-EIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLT 291
Query: 213 EFLLDDIRGLKRLRTVDLSYN 233
L +I LK L+T +S+N
Sbjct: 292 T-LPKEIGQLKNLQTF-ISFN 310
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L L +L+L++N+L +L ++G L LQ L + NQL LP +I
Sbjct: 242 NELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLK 301
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
L + + NN++T L + L LQ ++ NQ++ + + L IS +
Sbjct: 302 NLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQLSFQEEERIRKLLPKCQISFE 356
>gi|320166321|gb|EFW43220.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 897
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 14/208 (6%)
Query: 14 ALNLIDLEPETGSHPLTSDDLKGTP---ALITLLLVNNNITHIHENAFP--PTIRKLHVG 68
AL L++L+ ++ LTS P AL +L L N+ IT I +AF + +L +
Sbjct: 176 ALTLLNLQ----NNQLTSIPTAALPVLTALTSLQLWNSQITSIPASAFSGLTLLIELDIS 231
Query: 69 FNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP-SDIQ 126
+ +T ++ S GL+ L WL L NN++ S+ L L+KL++L ++ NQ+ ++P S
Sbjct: 232 RSKITEISASAFTGLSALTWLKLYNNQITSVPA-LNYLTKLRILRLDTNQITSVPDSAFA 290
Query: 127 LFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+QLG L+ +N ITS+ GL L ++ NQIT + F +L ++ I L +
Sbjct: 291 NLTQLGQLFLQSNSITSIPATAFTGLPVLFSLDLSLNQITSIPASAFTDLTMVNRIYLNS 350
Query: 186 NQITSMN-SSLSGLTKLAYLYLSHNQLT 212
NQITS++ S+ + L+ L + L +N T
Sbjct: 351 NQITSISGSAFTHLSVLTQVALENNPFT 378
Score = 70.5 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 11/213 (5%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNW 87
++ G AL TL L +N T I NAF + L++ N LTS+ +L LT L
Sbjct: 144 ANSFTGLTALKTLSLTSNPFTSISANAFTGLTALTLLNLQNNQLTSIPTAALPVLTALTS 203
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLV---IEQNQL-EALPSDIQLFSQLGSLYANNNRITS 143
L L N+++ S+ S L LL+ I ++++ E S S L L NN+ITS
Sbjct: 204 LQLWNSQITSIPAS--AFSGLTLLIELDISRSKITEISASAFTGLSALTWLKLYNNQITS 261
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLA 202
+ L LTKL++ +D NQIT V F NL L + LQ+N ITS+ ++ +GL L
Sbjct: 262 VPAL-NYLTKLRILRLDTNQITSVPDSAFANLTQLGQLFLQSNSITSIPATAFTGLPVLF 320
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS NQ+T L + + L+ N+I
Sbjct: 321 SLDLSLNQITSIPASAFTDLTMVNRIYLNSNQI 353
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 10/217 (4%)
Query: 26 SHPLTS---DDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-L 79
S+P TS + G AL L L NN +T I A P + L + + +TS+ S
Sbjct: 160 SNPFTSISANAFTGLTALTLLNLQNNQLTSIPTAALPVLTALTSLQLWNSQITSIPASAF 219
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
GLT L L ++ +++ + T LS L L + NQ+ ++P+ + ++L L +
Sbjct: 220 SGLTLLIELDISRSKITEISASAFTGLSALTWLKLYNNQITSVPA-LNYLTKLRILRLDT 278
Query: 139 NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 196
N+ITS+ D LT+L + N IT + F L L S+ L NQITS+ S+ +
Sbjct: 279 NQITSVPDSAFANLTQLGQLFLQSNSITSIPATAFTGLPVLFSLDLSLNQITSIPASAFT 338
Query: 197 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
LT + +YL+ NQ+T L L V L N
Sbjct: 339 DLTMVNRIYLNSNQITSISGSAFTHLSVLTQVALENN 375
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 9/228 (3%)
Query: 23 ETGSHPLTSDDLKGTPALIT-LLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNS- 78
+ + PLT+ G P T L+L +T + NAF + L + N++T ++ S
Sbjct: 40 DCSNKPLTAIP-TGIPVTTTKLILYGTGMTSLGANAFASLTALTYLSLQANSITDVSASA 98
Query: 79 LRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYA 136
GL+ L WL LN+N + L L+ L L + ++ +P++ + L +L
Sbjct: 99 FTGLSALTWLSLNSNNFAGIPTAALAGLTTLTYLDLTNCRIATVPANSFTGLTALKTLSL 158
Query: 137 NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSS 194
+N TS+ GLT L + N+ NQ+T + L L S+ L N+QITS+ S+
Sbjct: 159 TSNPFTSISANAFTGLTALTLLNLQNNQLTSIPTAALPVLTALTSLQLWNSQITSIPASA 218
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
SGLT L L +S +++TE GL L + L N+I N
Sbjct: 219 FSGLTLLIELDISRSKITEISASAFTGLSALTWLKLYNNQITSVPALN 266
>gi|298244934|ref|ZP_06968740.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
gi|297552415|gb|EFH86280.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
Length = 353
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 2/169 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ N L +L + L L L L+NN+ SL GQ+ L LQ L + NQL +LP++
Sbjct: 170 LHLSNNQLNTLPAKIDNLASLQSLALDNNQFSSLPGQVWNLRNLQFLALGNNQLNSLPAE 229
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I S+L SL+ N+ +SL + L+KL+ + NQ++ + E NL L + L
Sbjct: 230 IGNLSELSSLHLRNSHFSSLPRQVWNLSKLRHLGLTLNQLSSL-PAEIGNLSELQWLDLS 288
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
NNQ +S+ + +S L+ L +L LS+NQ + L +I L L+ ++L N
Sbjct: 289 NNQFSSLPAEISNLSSLRWLNLSNNQFSS-LPKEISNLSSLQWLNLGDN 336
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+I L L N+T I + +++ L++ N L +L + L+ L WL L NN+L SL
Sbjct: 52 VIRLHLCECNLTQIPSEVWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSL 111
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
Q+ L LQ+L + NQL +LP +I S L SLY +N++++L + L LQ +
Sbjct: 112 PEQVRNLRDLQVLDLANNQLSSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLH 171
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+ + + NL +L S++L NNQ +S+ + L L +L L +NQL L +
Sbjct: 172 LSNNQLNTL-PAKIDNLASLQSLALDNNQFSSLPGQVWNLRNLQFLALGNNQLNS-LPAE 229
Query: 219 IRGLKRLRTVDL 230
I L L ++ L
Sbjct: 230 IGNLSELSSLHL 241
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L+SL + L++L WL L+NN+ SL ++ LS L+ L + NQ +L
Sbjct: 259 LRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAEISNLSSLRWLNLSNNQFSSL 318
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLL 148
P +I S L L +N +L+ L
Sbjct: 319 PKEISNLSSLQWLNLGDNLSQTLEAEL 345
>gi|218441805|ref|YP_002380134.1| Miro domain-containing protein [Cyanothece sp. PCC 7424]
gi|218174533|gb|ACK73266.1| Miro domain protein [Cyanothece sp. PCC 7424]
Length = 1015
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + FN LTSL +SL L +L +L L N+L SL L L L L + NQL +LP
Sbjct: 121 KLDLSFNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPD 180
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L LY N+++SL L L L ++ FNQ+T + D L NL + L
Sbjct: 181 SLTRLVNLIYLYLGRNQLSSLLNSLTRLVNLTELDLSFNQLTSL-PDSLTPLVNLTELDL 239
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+NQ++S SL+ L L LYL+ NQL+ L D + L +L ++LS N+++
Sbjct: 240 SDNQLSSFPDSLTSLVNLTELYLTGNQLSS-LPDSLTRLAKLSRLNLSRNQLS 291
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 50 ITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
+T I E F + L++ +NNL+ ++ + L +L L+L N L L + L L
Sbjct: 37 LTEIPEEVFELEWLEVLYLNYNNLSCISEYIYCLINLKELYLYCNNLTILSNHITDLVNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
L + NQL +LP + L L + N++TSL L L L ++ NQ+T +
Sbjct: 97 TKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSLPDSLTRLVNLTYLDLRGNQLTSL- 155
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D L NL + L+ NQ+TS+ SL+ L L YLYL NQL+ LL+ + L L +
Sbjct: 156 PDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLIYLYLGRNQLSS-LLNSLTRLVNLTEL 214
Query: 229 DLSYNKI 235
DLS+N++
Sbjct: 215 DLSFNQL 221
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTSL +SL L +L +L+L N+L SL L L L L + NQL +LP +
Sbjct: 173 NQLTSLPDSLTRLVNLIYLYLGRNQLSSLLNSLTRLVNLTELDLSFNQLTSLPDSLTPLV 232
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L ++N+++S L L L + NQ++ + D L L ++L NQ++
Sbjct: 233 NLTELDLSDNQLSSFPDSLTSLVNLTELYLTGNQLSSLP-DSLTRLAKLSRLNLSRNQLS 291
Query: 190 SMNSSLSGLTKLAYLYLSHNQL 211
++ SL+ L L YLYL N L
Sbjct: 292 NLPDSLTRLVNLTYLYLKGNPL 313
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
W +L + ++ L L++L + N L + I L LY N +T L
Sbjct: 29 WDTKEEYKLTEIPEEVFELEWLEVLYLNYNNLSCISEYIYCLINLKELYLYCNNLTILSN 88
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
+ L L ++ NQ+T + D +L NL + L NQ+TS+ SL+ L L YL L
Sbjct: 89 HITDLVNLTKLDLSHNQLTSL-PDSLTHLVNLTKLDLSFNQLTSLPDSLTRLVNLTYLDL 147
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQLT L D + L L +DL N++
Sbjct: 148 RGNQLTS-LPDSLTRLVNLTYLDLRGNQL 175
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + FN LTSL +SL L +L L L++N+L S L +L L L + NQL +LP
Sbjct: 213 ELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSFPDSLTSLVNLTELYLTGNQLSSLPD 272
Query: 124 DIQLFSQLGSLYANNNRITSL-DGLLR 149
+ ++L L + N++++L D L R
Sbjct: 273 SLTRLAKLSRLNLSRNQLSNLPDSLTR 299
>gi|428181670|gb|EKX50533.1| hypothetical protein GUITHDRAFT_66876, partial [Guillardia theta
CCMP2712]
Length = 526
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 5/195 (2%)
Query: 41 ITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+ +LL NN+ + E++ ++RKL + FN L L + LT+L L+L NNR+K+L
Sbjct: 202 LNILLDGNNLIVVLEDSISMLSSLRKLDLSFNMLRELPPEIIFLTNLEGLYLVNNRIKTL 261
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L K+ + + +N+LE +P + L SL N + L + GLT L +
Sbjct: 262 PGDIGNLLKMVEVNLSENELEYIPETVGKMEALQSLVIEENALNYLPNQINGLTSLTKIS 321
Query: 159 MDFNQITMVRRDEFQ--NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ N + M+ + F L+ L + NNQ++S+ +S LT L L+L+ NQ+ + L
Sbjct: 322 LANNALDMLPAESFAIGYLYKLTELRFSNNQLSSIPEIISQLTTLDILHLAKNQIRK-LP 380
Query: 217 DDIRGLKRLRTVDLS 231
++ L LR +DLS
Sbjct: 381 YELGVLSSLRELDLS 395
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 50 ITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
+T I + F T ++ L + NN++ + + L +LN + L NN +K + + L KL
Sbjct: 3 LTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQKL 62
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+L I+ N+LE LP +I +QL L + NR+T L L T L+ +D N++ V
Sbjct: 63 SVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQ-VP 121
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
D +NL L + + +N I + + + T+L +L +S N
Sbjct: 122 PDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFN 162
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGF---NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L NNNI I + ++KL V + N L L + T L+ L L+ NRL L
Sbjct: 44 LYNNNIKEIPSSI--SNLQKLSVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYS 101
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
LG + L+ L+I+ N+L+ P I+ L + ++N I L + T+L N+ F
Sbjct: 102 LGQCTMLRELMIDHNELQVPPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSF 161
Query: 162 NQITMVR-RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N + + E L ++ + + NN++ ++ S L LT L L L N L L D I
Sbjct: 162 NSNKISKLPQELGLLADMTELDVSNNRLQALPSDLGKLTNLNIL-LDGNNLIVVLEDSIS 220
Query: 221 GLKRLRTVDLSYNKINKF 238
L LR +DLS+N + +
Sbjct: 221 MLSSLRKLDLSFNMLREL 238
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 50 ITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWL--FLNNNRLKSLEGQ 101
I H P IR L V N++ L + T+L+ L N+N++ L +
Sbjct: 113 IDHNELQVPPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQE 172
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
LG L+ + L + N+L+ALPSD+ + L L NN I L+ + L+ L+ ++ F
Sbjct: 173 LGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSISMLSSLRKLDLSF 232
Query: 162 NQITMVRR--DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
N M+R E L NL+ + L NN+I ++ + L K+ + LS N+L E++ + +
Sbjct: 233 N---MLRELPPEIIFLTNLEGLYLVNNRIKTLPGDIGNLLKMVEVNLSENEL-EYIPETV 288
Query: 220 RGLKRLRTVDLSYNKINKFGTRNEG 244
++ L+++ + N +N + G
Sbjct: 289 GKMEALQSLVIEENALNYLPNQING 313
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L V N L +L + L LT+LN L NN + LE + LS L+ L + N L L
Sbjct: 179 MTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSISMLSSLRKLDLSFNMLREL 238
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I + L LY NNRI +L G + L K+ N+ N++ + + + L S+
Sbjct: 239 PPEIIFLTNLEGLYLVNNRIKTLPGDIGNLLKMVEVNLSENELEYI-PETVGKMEALQSL 297
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++ N + + + ++GLT L + L++N L
Sbjct: 298 VIEENALNYLPNQINGLTSLTKISLANNAL 327
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPP----TIRKLHVGFNNLTSLNNSLRGLTDLNW 87
+ + G +L + L NN + + +F + +L N L+S+ + LT L+
Sbjct: 309 NQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTELRFSNNQLSSIPEIISQLTTLDI 368
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLL--VIEQNQLEALPSDIQLFSQLGSLYAN-------- 137
L L N+++ L +LG LS L+ L + N L+ +PS I F L L+ N
Sbjct: 369 LHLAKNQIRKLPYELGVLSSLRELDLSLAGNMLQMIPSGIGNFQGLKKLFLNDNQLAILP 428
Query: 138 ---------------NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
NN + +L L L L+ NM N++ +V NL NL+ ++
Sbjct: 429 PSVGDLLELEELQLFNNELIALPERLGQLRNLKQMNMSNNKLRVVL-PAIGNLSNLEKLN 487
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L +N + + + + KL +L L HN+L
Sbjct: 488 LSHNLLQGLPREIGQIEKLLFLSLEHNEL 516
>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
Length = 392
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 82/144 (56%), Gaps = 2/144 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLF 128
N LT L + GLT L LFL++N+L S+ ++G L+ L+ L I N+LE LP I
Sbjct: 78 NELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRL 137
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
+ L L ++NR+TS+ + LT L +D N++T V E L +L + L N++
Sbjct: 138 TSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPA-EIGRLTSLTVLRLDGNRL 196
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLT 212
TS+ + + LT L YL LS N+LT
Sbjct: 197 TSVPAEIGRLTSLTYLRLSGNKLT 220
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTS+ + LT L L L+ NRL S+ ++G L+ L L + N+L ++P++I +
Sbjct: 171 NKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLT 230
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L + N++TS+ + LT L V +D N++T V E L L+ + L N++T
Sbjct: 231 SLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPA-EIGQLTALEGLFLDGNKLT 289
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ + + LT L L+LS N+LT + +I L LR L NK+
Sbjct: 290 SVPAEIGRLTSLHALFLSDNKLTS-VPAEIGRLTSLREFTLHNNKL 334
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N LTS+ + LT L +L L+ N+L S+ ++G L+ L L ++ N+L ++P++
Sbjct: 189 LRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAE 248
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L L + NR+TS+ + LT L+ +D N++T V E L +L ++ L
Sbjct: 249 IGRLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGNKLTSVPA-EIGRLTSLHALFLS 307
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
+N++TS+ + + LT L L +N+LT + + RLR +Y
Sbjct: 308 DNKLTSVPAEIGRLTSLREFTLHNNKLTSVPAE----IWRLRERGYAY 351
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N LTS+ + LT L L L+ N+L S+ ++G L+ L +L ++ N+L ++P++
Sbjct: 212 LRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAE 271
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L L+ + N++TS+ + LT L + N++T V E L +L +L
Sbjct: 272 IGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPA-EIGRLTSLREFTLH 330
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
NN++TS+ + + L + Y YL E
Sbjct: 331 NNKLTSVPAEIWRLRERGYAYLDEGVTIE 359
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
AL L L NN +T + E T + L + N LTS+ + L L L + NN L+
Sbjct: 69 ALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELED 128
Query: 98 LEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
L G+ +G L+ L L + N+L ++P++I + L L + N++TS+ + LT L V
Sbjct: 129 LPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTV 188
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+D N++T V E L +L + L N++TS+ + + LT L L L N+LT
Sbjct: 189 LRLDGNRLTSVPA-EIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLT 243
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 85 LNWLFLNNNRLKSLE---GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L W N +L SL LG L+ L L + N+L LP I + L L+ ++N++
Sbjct: 47 LEW---NEKKLASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKL 103
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
TS+ + L L+ + N++ + L +L ++L +N++TS+ + + LT L
Sbjct: 104 TSVPAEIGQLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSL 163
Query: 202 AYLYLSHNQLT 212
L L N+LT
Sbjct: 164 TGLGLDGNKLT 174
>gi|417770632|ref|ZP_12418538.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|418680646|ref|ZP_13241890.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400327590|gb|EJO79835.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409947404|gb|EKN97402.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|455665927|gb|EMF31409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 333
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L ++ L +L L L NN+ K+L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ LP +I L +L + NR+T+ + L LQ N+D+NQ+T + + E L +L
Sbjct: 107 KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQ-EIGQLQSL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L N++ ++ + + L L LYLS+NQLT L ++I LK L+ + L N++
Sbjct: 166 QKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLT-ILPEEIGQLKNLQALILGDNQL 221
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++KL++ N L +L N + L +L L+L+NN+L L ++G L LQ L++ NQL
Sbjct: 164 SLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTI 223
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L LY+ NN +T+L + L LQ ++ NQ+T + + E L NL +
Sbjct: 224 LPKEIGQLQNLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQLTTLPK-EIGQLKNLQT 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
NNQ+T + + L L +L L++NQL+
Sbjct: 283 FISFNNQLTMLPQEIGQLQNLQWLKLNNNQLS 314
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 100/174 (57%), Gaps = 7/174 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+ + L +L L L+ N+L +L ++G L LQ L +++N+L+AL
Sbjct: 119 LQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKAL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I L LY +NN++T L + L LQ + NQ+T++ ++ + QNL L
Sbjct: 179 PNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLY 238
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
S+ NN++T++ + L L LYL+ NQLT L +I LK L+T +S+N
Sbjct: 239 SV---NNELTTLPKEIGQLENLQELYLNDNQLTT-LPKEIGQLKNLQTF-ISFN 287
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSL 75
L ++ LK P I TL+L N +T FP I +KL++ +N LT+L
Sbjct: 101 LWNNQLKNLPKEIGQLQNLQTLILSVNRLT-----TFPQEIGQLKNLQKLNLDYNQLTTL 155
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
+ L L L L+ NRLK+L ++G L LQ L + NQL LP +I L +L
Sbjct: 156 LQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+N++T L + L L++ N++T + + E L NL + L +NQ+T++ +
Sbjct: 216 LGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPK-EIGQLENLQELYLNDNQLTTLPKEI 274
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L +NQLT L +I L+ L+ + L+ N++
Sbjct: 275 GQLKNLQTFISFNNQLT-MLPQEIGQLQNLQWLKLNNNQL 313
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT L + L +L L L +N+L L ++G L L+LL N+L L
Sbjct: 188 LQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTTL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY N+N++T+L + L LQ F NQ+TM+ + E L NL +
Sbjct: 248 PKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQ-EIGQLQNLQWL 306
Query: 182 SLQNNQITS 190
L NNQ++S
Sbjct: 307 KLNNNQLSS 315
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L NN +T + E ++ L +G N LT L + L +L L+ NN L +L +
Sbjct: 191 LYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKE 250
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ L + NQL LP +I L + + NN++T L + L LQ ++
Sbjct: 251 IGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNN 310
Query: 162 NQITMVRRDEFQNL 175
NQ++ + Q L
Sbjct: 311 NQLSSQEEERIQKL 324
>gi|340727651|ref|XP_003402153.1| PREDICTED: slit homolog 3 protein-like [Bombus terrestris]
Length = 343
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 124/225 (55%), Gaps = 8/225 (3%)
Query: 28 PLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTD 84
PL+ + L +L L+ N I+ I ++ F + L++G N++ S+N +S GL+
Sbjct: 110 PLSPNLFSELKQLHSLSLIFNKISEIPKDTFADLSNLMWLYLGHNDIESVNKDSFSGLSS 169
Query: 85 -LNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRI 141
L +L+LN+N++ S++ G + +L L +E N+L ++ P ++ +L L+ N +
Sbjct: 170 SLTFLWLNDNKITSIDTGAFSQMPELTRLHLENNKLTSIQPGVLRGLHKLDGLFLEENEL 229
Query: 142 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 199
TS+ +GL L++ N+D NQI + F +L L+ ++L+ NQ+T ++S + +GL+
Sbjct: 230 TSVSKNDFKGLIGLRILNLDHNQIASIESGAFSDLSQLEQLNLRKNQLTRVDSGVFNGLS 289
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
L L LS N++ GL L+T+ L+ NK+ ++ G
Sbjct: 290 NLKRLDLSDNKIAVVQSGAFAGLSALKTLILANNKLTDVDRKDFG 334
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 7/181 (3%)
Query: 32 DDLKGTPALITLLLVNNN-ITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNW 87
D G + +T L +N+N IT I AF P + +LH+ N LTS+ LRGL L+
Sbjct: 162 DSFSGLSSSLTFLWLNDNKITSIDTGAFSQMPELTRLHLENNKLTSIQPGVLRGLHKLDG 221
Query: 88 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 145
LFL N L S+ + L L++L ++ NQ+ ++ S SQL L N++T +D
Sbjct: 222 LFLEENELTSVSKNDFKGLIGLRILNLDHNQIASIESGAFSDLSQLEQLNLRKNQLTRVD 281
Query: 146 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
G+ GL+ L+ ++ N+I +V+ F L L ++ L NN++T ++ GLT L L
Sbjct: 282 SGVFNGLSNLKRLDLSDNKIAVVQSGAFAGLSALKTLILANNKLTDVDRKDFGLTSLTIL 341
Query: 205 Y 205
Y
Sbjct: 342 Y 342
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 115/201 (57%), Gaps = 14/201 (6%)
Query: 46 VNNNITHIHENAFPPTIRKLH---VGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL--E 99
+++N+ + N F +++LH + FN ++ + ++ L++L WL+L +N ++S+ +
Sbjct: 104 LDSNVIPLSPNLFSE-LKQLHSLSLIFNKISEIPKDTFADLSNLMWLYLGHNDIESVNKD 162
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYANNNRITSLD-GLLRGLTKLQ 155
G S L L + N++ ++ D FSQ L L+ NN++TS+ G+LRGL KL
Sbjct: 163 SFSGLSSSLTFLWLNDNKITSI--DTGAFSQMPELTRLHLENNKLTSIQPGVLRGLHKLD 220
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF 214
++ N++T V +++F+ L L ++L +NQI S+ S + S L++L L L NQLT
Sbjct: 221 GLFLEENELTSVSKNDFKGLIGLRILNLDHNQIASIESGAFSDLSQLEQLNLRKNQLTRV 280
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
GL L+ +DLS NKI
Sbjct: 281 DSGVFNGLSNLKRLDLSDNKI 301
>gi|320168280|gb|EFW45179.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 769
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 8/209 (3%)
Query: 35 KGTPAL-ITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFL 90
G PA +TL L +N IT I NAF + L + N +T L+ N+ GL+ L L L
Sbjct: 52 SGIPATTVTLFLSSNPITSIPANAFATLTALESLRLYNNQITGLSANAFAGLSALTLLDL 111
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG-L 147
N++ ++ E L+ LQ L + NQ+ ++ ++ S L L+ +N + ++
Sbjct: 112 KGNQITTIPENAFTGLASLQQLWLYTNQITSISANAFAGLSALTQLWMYSNPLPNITANA 171
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYL 206
GLT L +D NQ+T + + F + L + LQNN ITS++ S+ +GLT L YL +
Sbjct: 172 FAGLTALNSMQLDRNQLTSIVANAFAGMPALTDLELQNNAITSISPSAFAGLTALTYLNM 231
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N +T + GL L + LS N I
Sbjct: 232 VQNHITGISANSFTGLSALNELYLSQNSI 260
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 10/208 (4%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
L+++ G AL L L N IT I ENAF ++++L + N +TS++ N+ GL+ L
Sbjct: 95 LSANAFAGLSALTLLDLKGNQITTIPENAFTGLASLQQLWLYTNQITSISANAFAGLSAL 154
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L++ +N L ++ L+ L + +++NQL ++ ++ L L NN ITS
Sbjct: 155 TQLWMYSNPLPNITANAFAGLTALNSMQLDRNQLTSIVANAFAGMPALTDLELQNNAITS 214
Query: 144 LD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GLT L NM N IT + + F L L+ + L N IT ++S + +GLT L
Sbjct: 215 ISPSAFAGLTALTYLNMVQNHITGISANSFTGLSALNELYLSQNSITVISSNAFNGLTAL 274
Query: 202 AYLYLSHNQLTEF---LLDDIRGLKRLR 226
+ LYL NQ+T + ++ L LR
Sbjct: 275 SSLYLPSNQITSISANVFTNLPALSSLR 302
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNR 94
P L L L N IT I NAF + L + N +T + N++ LT LN+L+LN N+
Sbjct: 368 PGLTDLKLYANKITTIFANAFSGLSVLDSLDLSGNLITVIPANAIASLTALNFLYLNENQ 427
Query: 95 LKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL----LR 149
+ ++ +L+ L L ++QNQL ++ D F+ L +L + R S+ +
Sbjct: 428 ITNIPANAFASLTALTGLFLQQNQLASI--DANAFAGLTALIDLDLREASITVMPVNAFT 485
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSH 208
LT L + NQIT + + F +L L+ + L NQITS+ S+ + LT L+ LYL+
Sbjct: 486 ALTALTSLYLSLNQITTISANVFASLTALNYLDLSANQITSIEASAFTRLTALSDLYLND 545
Query: 209 NQLTEFLLDDIRGLK 223
N T +GL
Sbjct: 546 NPFTTLPPGLFQGLP 560
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 27/203 (13%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNR 94
PAL L L +N IT I NAF P + L + N +T++ N+ GL+ L+ L L+ N
Sbjct: 344 PALSALDLSDNEITVIPVNAFTNLPGLTDLKLYANKITTIFANAFSGLSVLDSLDLSGNL 403
Query: 95 LKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+ + + +L+ L L + +NQ+ +P++ F+ L T+L GL
Sbjct: 404 ITVIPANAIASLTALNFLYLNENQITNIPANA--FASL----------TALTGLF----- 446
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLT 212
+ NQ+ + + F L L + L+ IT M ++ + LT L LYLS NQ+T
Sbjct: 447 -----LQQNQLASIDANAFAGLTALIDLDLREASITVMPVNAFTALTALTSLYLSLNQIT 501
Query: 213 EFLLDDIRGLKRLRTVDLSYNKI 235
+ L L +DLS N+I
Sbjct: 502 TISANVFASLTALNYLDLSANQI 524
>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
Length = 582
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +S++ LT L L+L N+L+SL ++G L L+ L + +N L +LP + QL +
Sbjct: 115 LPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDSLGNLKQLRMV 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ LT L + FN+IT V +D +NL NL +S++ N+I + +
Sbjct: 175 DLRHNKLREIPPVVYRLTSLTTLYLRFNRITSVEKD-IKNLSNLTMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 234 IGELCNLITLDVAHNQL-EHLPKEIGNCTQITKLDLQHNEL 273
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP + +L ++ FN +TS+ ++ L++L L + N++K L ++G L L L
Sbjct: 184 IPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLPAEIGELCNLITL 243
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQLE LP +I +Q+ L +N + L + L+ L+ + +N+++ + R
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIPRTL 303
Query: 172 FQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
Q LD ++L+NN I+++ LS L L L L+ N + + + +++
Sbjct: 304 AQ-CSKLDELNLENNIISTLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNM 362
Query: 231 SYNKINK--FGTRNEGK 245
+N+INK FG + K
Sbjct: 363 EHNRINKIPFGIFSRAK 379
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL LG L +L+++ + N+L +P
Sbjct: 127 ELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDSLGNLKQLRMVDLRHNKLREIPP 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L +LY NRITS++ ++ L+ L + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L+++ L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITKLDLQHNELLD-LPDTIGNLSTLKSLGLRYNRLSAI 299
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
T++ L + +N L+++ +L + L+ L L NN + +L EG L +L L L + +N +
Sbjct: 285 TLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLARNCFQ 344
Query: 120 ALPSDIQLFSQLGSLYANN---NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+ P + SQ ++YA N NRI + G+ L NM NQ+T + D F
Sbjct: 345 SYP--VGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTW 401
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ ++L NQ+ + +SGL L L LS+N L L I L++LR +DL NK+
Sbjct: 402 TSMVELNLATNQLNKIPEDVSGLVSLEVLILSNN-LLRNLPHGIGNLRKLRELDLEENKL 460
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L + + GL L L L+NN L++L +G L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++++L + L L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLRDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENFLTQL-PEEIGTLENLEE 521
Query: 181 ISLQNN-QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPHLNSLPFELALCSKLSIMSIENCPLSTLPAQIVAG 563
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 26/194 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L+ L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIPRT 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQ------------------------VFNM 159
+ S+L L NN I++L +GLL L L NM
Sbjct: 303 LAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQL + + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNK-IPEDV 421
Query: 220 RGLKRLRTVDLSYN 233
GL L + LS N
Sbjct: 422 SGLVSLEVLILSNN 435
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 32 DDLKGTPALITLLLVNN---NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+D+ G +L L+L NN N+ H N +R+L + N L SL N + L DL L
Sbjct: 419 EDVSGLVSLEVLILSNNLLRNLPHGIGNLR--KLRELDLEENKLESLPNEIAYLRDLQRL 476
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN-RITSLDGL 147
L NN+L +L +G L L L + +N L LP +I L LY N+N + SL
Sbjct: 477 ILTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFE 536
Query: 148 LRGLTKLQVFNMD 160
L +KL + +++
Sbjct: 537 LALCSKLSIMSIE 549
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L+ L + +N+L SL GT + + L + NQL +P D+ L L +NN + +L
Sbjct: 381 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRNL 440
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ L KL+ +++ N++ + +E L +L + L NNQ++++ + L L +L
Sbjct: 441 PHGIGNLRKLRELDLEENKLESLP-NEIAYLRDLQRLILTNNQLSTLPRGIGHLINLTHL 499
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L N LT+ L ++I L+ L + L+ N
Sbjct: 500 GLGENFLTQ-LPEEIGTLENLEELYLNDN 527
>gi|260840111|ref|XP_002613790.1| hypothetical protein BRAFLDRAFT_124171 [Branchiostoma floridae]
gi|229299180|gb|EEN69799.1| hypothetical protein BRAFLDRAFT_124171 [Branchiostoma floridae]
Length = 1010
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
G PAL +L L +N I + + AF +R L++ N + + SL GL+ L +L +++N
Sbjct: 295 GLPALNSLDLSSNVIVEVEDGAFEDLSNLRTLYLQSNQIQEI--SLAGLSSLGYLSMDSN 352
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQL-EAL-PSDIQLFSQLGSLYANNNRITSLDG----- 146
+LK G L + S LQ L + N + EAL P + L +LY NN G
Sbjct: 353 KLKKFPGNLKSASPLQTLSLGNNPIQEALGPGQFSVLHSLKNLYLNNIGCLQSAGTFDPK 412
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 205
L G L + +N + + FQ + + L +N +TS++ SL LT+L +L
Sbjct: 413 ALCGSDTLGDVYLSYNGLLSIAPTTFQCTPTITMLYLHHNNLTSIDPSLFHPLTQLWWLD 472
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
LS+NQL+ D GL +L +VDL+YN
Sbjct: 473 LSYNQLSYVAPDTFLGLDKLISVDLTYN 500
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNR 94
P+L + L N+IT + E AF P + +++ N ++SL+ + G L L ++ N
Sbjct: 154 PSLEEIQLFFNDITELEEGAFGGMPQLTSVYLPSNRISSLSGPIFEGSRKLKSLDVSGNN 213
Query: 95 LKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLF---SQLGSLYANNNRITSLDGLLRG 150
+ +L+ + LQ L + N +E++ D+ F L SL + NRIT++D
Sbjct: 214 IVTLDNHVFMDTPNLQNLYLSANDIESI--DVGAFYVLQHLQSLSLDGNRITNIDTNFHN 271
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHN 209
L KL+ +++ N+I+++R F L L+S+ L +N I + + + L+ L LYL N
Sbjct: 272 LPKLESISLEGNKISVIRNTTFVGLPALNSLDLSSNVIVEVEDGAFEDLSNLRTLYLQSN 331
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
Q+ E L GL L + + NK+ KF
Sbjct: 332 QIQEISL---AGLSSLGYLSMDSNKLKKF 357
>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 1107
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 103/194 (53%), Gaps = 3/194 (1%)
Query: 43 LLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L+L +N IT I E T + +L + +N +T + ++ LT+L L L++N++ +
Sbjct: 246 LILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEA 305
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+ L+ L L + N++ +P I + L LY N N+IT + + LT L ++
Sbjct: 306 IANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSS 365
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQIT + + NL NL + L N+IT + +++ LT L L+L NQ+T+ + + +
Sbjct: 366 NQITQI-PEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQ-IPEALES 423
Query: 222 LKRLRTVDLSYNKI 235
L +L +DL N +
Sbjct: 424 LPKLEKLDLRGNPL 437
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L +G N +T + ++ LT+L L L +N++ + + L+ L L + NQ+ +P
Sbjct: 222 QLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPK 281
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I + L L ++N+IT + + LT L ++ N+IT + + NL NL +
Sbjct: 282 AIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEI-PETIANLTNLTELYF 340
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
N+IT + +++ LT L L+LS NQ+T+ + + I L L + L+YNKI +
Sbjct: 341 NYNKITQIAEAIAKLTNLTELHLSSNQITQ-IPEAIANLTNLTELYLNYNKITQIA 395
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
+T + ++ LT+L L L +N++ + L+ L L + NQ+ +P I + L
Sbjct: 115 ITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNL 174
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L +N+IT + + LT L ++ NQIT + + NL NL + L +NQIT +
Sbjct: 175 THLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPK-AIANLTNLTQLDLGDNQITEI 233
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+++ LT L +L L NQ+TE + + I L L +DLSYN+I +
Sbjct: 234 PKAIANLTNLTHLILFSNQITE-IPEAIANLTNLMQLDLSYNQITEI 279
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 29 LTSDDLKGTPALITLL-------LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLR 80
L S+ + TP I L L +N IT I E T + L + N +T + ++
Sbjct: 133 LFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIA 192
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT+L L L +N++ + + L+ L L + NQ+ +P I + L L +N+
Sbjct: 193 NLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQ 252
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
IT + + LT L ++ +NQIT + + NL NL + L +N+IT + +++ LT
Sbjct: 253 ITEIPEAIANLTNLMQLDLSYNQITEIPK-AIANLTNLTQLVLSDNKITEIPEAIANLTN 311
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
L L LS N++TE + + I L L + +YNKI +
Sbjct: 312 LTQLDLSDNKITE-IPETIANLTNLTELYFNYNKITQIA 349
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L+L +N IT I E T + +L + N +T + ++ LT+L L+ N N++ +
Sbjct: 289 LTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQI 348
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ L+ L L + NQ+ +P I + L LY N N+IT + + LT L +
Sbjct: 349 AEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTELH 408
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNN 186
+D NQIT + + ++L L+ + L+ N
Sbjct: 409 LDGNQITQI-PEALESLPKLEKLDLRGN 435
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 2/172 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
V NNL +L L GL +L L ++ N L+ + + + L+ L++ + ++ +P I
Sbjct: 64 VSGNNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIA 123
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+ L L +N+IT + LT L ++ NQIT + + NL NL + L +N
Sbjct: 124 NLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEI-PEAIANLTNLTHLILFSN 182
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QIT + +++ LT L L L NQ+TE + I L L +DL N+I +
Sbjct: 183 QITEIPEAIANLTNLTQLDLGDNQITE-IPKAIANLTNLTQLDLGDNQITEI 233
>gi|320165161|gb|EFW42060.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 641
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 7/213 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+++ G AL L L +N+I I NAF ++ L +G+N L ++ + GLT L
Sbjct: 77 ISAGAFTGLTALTYLNLNSNSIRSISANAFTGLTALKHLPLGYNELADISATAFAGLTAL 136
Query: 86 NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITS 143
N L L +N++ S+ +L+ L L ++ NQL +++ S L L +N+ITS
Sbjct: 137 NALHLQSNQITSISASAFASLTTLTYLRLDSNQLTNFAANVFAGLSALALLNLESNQITS 196
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ LT L + + NQIT + F L L + L NNQIT++ + + SGL+ L
Sbjct: 197 ISANAFTDLTALTLLYLQRNQITSIPTSAFTGLTALKDLELFNNQITAIAANTFSGLSAL 256
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
LYL NQ+T + GL L + L N+
Sbjct: 257 TQLYLFSNQITSIAANAFTGLPALTALALDGNR 289
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 11/193 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDL 85
++++ G AL L L N + I AF + LH+ N +TS++ S LT L
Sbjct: 101 ISANAFTGLTALKHLPLGYNELADISATAFAGLTALNALHLQSNQITSISASAFASLTTL 160
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRI 141
+L L++N+L + + LS L LL +E NQ+ ++ ++ F+ L +L Y N+I
Sbjct: 161 TYLRLDSNQLTNFAANVFAGLSALALLNLESNQITSISANA--FTDLTALTLLYLQRNQI 218
Query: 142 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLT 199
TS+ GLT L+ + NQIT + + F L L + L +NQITS+ + + +GL
Sbjct: 219 TSIPTSAFTGLTALKDLELFNNQITAIAANTFSGLSALTQLYLFSNQITSIAANAFTGLP 278
Query: 200 KLAYLYLSHNQLT 212
L L L N+ T
Sbjct: 279 ALTALALDGNRFT 291
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 HPLTSDDLKGTPALITLLLVNNN-----ITHIHENAFPPTIRKLHVGFNNLTSLN-NSLR 80
P + + GT A+ T + N +T I A P L + N +TS++ +
Sbjct: 25 QPAQAANACGTDAVCTCTGTSVNCGGRSLTEI-PTAVPVNTTSLELNNNQITSISAGAFT 83
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
GLT L +L LN+N ++S+ T L+ L+ L + N+L +DI +
Sbjct: 84 GLTALTYLNLNSNSIRSISANAFTGLTALKHLPLGYNEL----ADISATA---------- 129
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGL 198
GLT L ++ NQIT + F +L L + L +NQ+T+ +++ +GL
Sbjct: 130 --------FAGLTALNALHLQSNQITSISASAFASLTTLTYLRLDSNQLTNFAANVFAGL 181
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+ LA L L NQ+T + L L + L N+I T
Sbjct: 182 SALALLNLESNQITSISANAFTDLTALTLLYLQRNQITSIPTS 224
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDL 85
+++ G AL L L +N IT I +AF T+ L + N LT+ N GL+ L
Sbjct: 125 ISATAFAGLTALNALHLQSNQITSISASAFASLTTLTYLRLDSNQLTNFAANVFAGLSAL 184
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPS----------DIQLFSQLGSL 134
L L +N++ S+ T L+ L LL +++NQ+ ++P+ D++LF
Sbjct: 185 ALLNLESNQITSISANAFTDLTALTLLYLQRNQITSIPTSAFTGLTALKDLELF------ 238
Query: 135 YANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
NN+IT++ GL+ L + NQIT + + F L L +++L N+ T++
Sbjct: 239 ---NNQITAIAANTFSGLSALTQLYLFSNQITSIAANAFTGLPALTALALDGNRFTTLPP 295
Query: 194 SL 195
L
Sbjct: 296 GL 297
>gi|124006501|ref|ZP_01691334.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123987914|gb|EAY27594.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 258
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ + + F +L + + L +L L++NNN + L ++G L KLQ + + N+L +L
Sbjct: 70 LKSIKLNFTSLKKIPPQIEQLQNLESLYVNNNPIPELPPEIGALKKLQQMSVADNKLISL 129
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-EFQNLHNLDS 180
P +I + L L + N I+S + LTKL+ +M NQ+++ R NL
Sbjct: 130 PKEIGQLTHLTELDLSGNFISSFPEEFKNLTKLKYLSM--NQMSLKRIPLVVTYFTNLKQ 187
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+S NQI + S + L L L +S N LT F+ DDI+ LK+L+ D N
Sbjct: 188 LSFMRNQIRQLPSDIKKLQNLEELMISSNDLT-FIPDDIKHLKKLKIFDARKN 239
>gi|456987322|gb|EMG22649.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 305
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+L+ + L +L LFL+NN+L + ++G L LQ L + NQL
Sbjct: 91 LQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 150
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L +N++T++ + L KLQ N+D NQ+T + + E L NL +
Sbjct: 151 PKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPK-EIGQLQNLQVL 209
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ ++ L L L L NQLT L +I LK L+ ++L N++
Sbjct: 210 FLSYNQFKTIPVEFGQLKNLKMLSLDANQLTA-LPKEIGKLKNLKMLNLDANQL 262
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N LT+ + L L+ L+L+NN+L L ++G L LQ L + NQL+ +
Sbjct: 22 LQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTI 81
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I+ L LY +NN++T+L + L L+ + NQ+T + E L NL +
Sbjct: 82 SKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPK-EIGKLQNLQEL 140
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L KL +L L NQLT + ++I L++L+ ++L N++
Sbjct: 141 YLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT-IPNEIGKLQKLQELNLDVNQL 193
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L L +R L +L LFLN N+L + ++ L L L + NQL LP +
Sbjct: 2 LDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVE 61
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L NN++ ++ + L LQ +D NQ+T + + E L NL S+ L
Sbjct: 62 IGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSK-EIGKLQNLKSLFLS 120
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NNQ+T+ + L L LYLS+NQLT F +I L++L+ + L N++
Sbjct: 121 NNQLTTFPKEIGKLQNLQELYLSNNQLTTF-PKEIGKLQKLQWLGLGDNQL 170
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +++ + L +L L+L+NN+L +L ++G L L+ L + NQL
Sbjct: 68 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTF 127
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ + NQ+T + +E L L +
Sbjct: 128 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI-PNEIGKLQKLQEL 186
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L L L+LS+NQ + + LK L+ + L N++
Sbjct: 187 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPV-EFGQLKNLKMLSLDANQL 239
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 12/153 (7%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L NN +T FP I KL +G N LT++ N + L L L L+ N+L
Sbjct: 140 LYLSNNQLT-----TFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 194
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ ++G L LQ+L + NQ + +P + L L + N++T+L + L L++
Sbjct: 195 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 254
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
N+D NQ+T + + E L NL ++ L+NNQ +
Sbjct: 255 LNLDANQLTTIPK-EIGQLQNLQTLYLRNNQFS 286
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 116 NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
NQL LP +I+ L L+ N N++T+ + L L + NQ+T++ E L
Sbjct: 7 NQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPV-EIGQL 65
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL ++L NNQ+ +++ + L L LYL +NQLT L +I L+ L+++ LS N++
Sbjct: 66 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTA-LSKEIGKLQNLKSLFLSNNQL 124
Query: 236 NKF 238
F
Sbjct: 125 TTF 127
>gi|421091073|ref|ZP_15551856.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000177|gb|EKO50848.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 212
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 2/156 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
LN +L+ D+ L L+ N+L +L ++G L KL+ L ++ NQL LP +I+ L SL
Sbjct: 29 LNKALQNPMDVQTLDLSKNQLTTLPKEIGKLQKLRYLYLDHNQLTTLPKEIEYLKDLESL 88
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
NN++T+L + L KLQ + NQ+T + + E L L + L+ NQ+T++
Sbjct: 89 DLRNNQLTTLPKEIEYLKKLQELYLINNQLTTLPK-EIGYLEELWLLDLRKNQLTTLPKE 147
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L KL LYL +NQ T F +I L++L T++L
Sbjct: 148 IGKLQKLEKLYLKNNQFTTF-PKEIGKLQKLNTLNL 182
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P ++ L + N LT+L + L L +L+L++N+L +L ++ L L+ L + NQL
Sbjct: 36 PMDVQTLDLSKNQLTTLPKEIGKLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQL 95
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ +L LY NN++T+L + L +L + ++ NQ+T + + E L L
Sbjct: 96 TTLPKEIEYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPK-EIGKLQKL 154
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+ + L+NNQ T+ + L KL L LDDI LK
Sbjct: 155 EKLYLKNNQFTTFPKEIGKLQKLNTLN----------LDDIPALK 189
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P D+Q +L + N++T+L + L KL+ +D NQ+T + + E + L +L+S+
Sbjct: 36 PMDVQ------TLDLSKNQLTTLPKEIGKLQKLRYLYLDHNQLTTLPK-EIEYLKDLESL 88
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NNQ+T++ + L KL LYL +NQLT L +I L+ L +DL N++
Sbjct: 89 DLRNNQLTTLPKEIEYLKKLQELYLINNQLTT-LPKEIGYLEELWLLDLRKNQL 141
>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 378
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+L+ + L +L LFL+NN+L + ++G L LQ L + NQL
Sbjct: 164 LQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 223
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L +N++T++ + L KLQ N+D NQ+T + + E L NL +
Sbjct: 224 PKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPK-EIGQLQNLQVL 282
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ ++ L L L L NQLT L +I LK L+ ++L N++
Sbjct: 283 FLSYNQFKTIPVEFGQLKNLKMLSLDANQLTA-LPKEIGKLKNLKMLNLDANQL 335
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N LT+ + L L+ L+L+NN+L L ++G L LQ L + NQL+ +
Sbjct: 95 LQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTI 154
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I+ L LY +NN++T+L + L L+ + NQ+T + E L NL +
Sbjct: 155 SKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPK-EIGKLQNLQEL 213
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L KL +L L NQLT + ++I L++L+ ++L N++
Sbjct: 214 YLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT-IPNEIGKLQKLQELNLDVNQL 266
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L L + L +L L L++N+L L ++ L LQ L + NQL
Sbjct: 46 PLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I+ L LY +NN++T L + L LQ N+ NQ+ + + E + L NL
Sbjct: 106 TTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISK-EIEQLKNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+T+++ + L L L+LS+NQLT F +I L+ L+ + LS N++ F
Sbjct: 165 QKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTF-PKEIGKLQNLQELYLSNNQLTTF 223
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L L +R L +L LFLN N+L + ++ L L L + NQL L
Sbjct: 72 LQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTIL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN++ ++ + L LQ +D NQ+T + + E L NL S+
Sbjct: 132 PVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSK-EIGKLQNLKSL 190
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L L LYLS+NQLT F +I L++L+ + L N++
Sbjct: 191 FLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF-PKEIGKLQKLQWLGLGDNQL 243
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +++ + L +L L+L+NN+L +L ++G L L+ L + NQL
Sbjct: 141 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTF 200
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ + NQ+T + +E L L +
Sbjct: 201 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI-PNEIGKLQKLQEL 259
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L L L+LS+NQ + + LK L+ + L N++
Sbjct: 260 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPV-EFGQLKNLKMLSLDANQL 312
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 12/153 (7%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L NN +T FP I KL +G N LT++ N + L L L L+ N+L
Sbjct: 213 LYLSNNQLT-----TFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 267
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ ++G L LQ+L + NQ + +P + L L + N++T+L + L L++
Sbjct: 268 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 327
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
N+D NQ+T + + E L NL ++ L+NNQ +
Sbjct: 328 LNLDANQLTTIPK-EIGQLQNLQTLYLRNNQFS 359
>gi|255087408|ref|XP_002505627.1| predicted protein [Micromonas sp. RCC299]
gi|226520897|gb|ACO66885.1| predicted protein [Micromonas sp. RCC299]
Length = 573
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 132/275 (48%), Gaps = 45/275 (16%)
Query: 7 FEDGHAVALNLID------LEPETGSHP------LTSDDLKGTPA-------LITLLLVN 47
E+G V L+L++ L E G L ++L PA L+T L +
Sbjct: 276 MENGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSVPAEIGQLTSLMTFGLSD 335
Query: 48 NNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N +T + E ++ L++ N L S+ + LT L LFL++NRL S+ ++G L+
Sbjct: 336 NKLTSVPAEIGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVPAEIGQLT 395
Query: 107 KLQLLVIEQNQLEALPSDIQ-----------------LFSQLGSLYA------NNNRITS 143
L+ L + +NQL ++P+ I+ L +++G L A N +TS
Sbjct: 396 SLKGLHLSRNQLTSVPAAIRDLRAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAGNELTS 455
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ + LT L+V + N++T V E L +L+ + L +N++TS+ + + LT L
Sbjct: 456 VPAEIGQLTSLEVLELSRNKLTSVPV-EIGQLTSLERLYLSSNRLTSLPAEIGQLTSLKR 514
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LYL HNQLT + +I L L+ DL N++
Sbjct: 515 LYLDHNQLTS-VPAEIGQLAALQWFDLQRNELTSV 548
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+L++ N LT++ + LT L L L NRL S+ ++G L+ L +LV+ NQ +
Sbjct: 98 SLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQFTS 157
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L + NR+TS+ + LT L ++ NQ+T V E L L
Sbjct: 158 VPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSV-PAEIGQLTLLKG 216
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+ L NQ+TS+ + + LT L +L L +NQLT + +IR L+
Sbjct: 217 LELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTS-VPAEIRELR 258
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 25/201 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+RKL + N LTSL + LT L L L N+L S+ ++G L+ L+ L + N+L +
Sbjct: 29 ALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRLMS 88
Query: 121 LPSDI-QLFS---------QLGSLYANNNRITSLDGL-LRG------------LTKLQVF 157
+P++I QL S QL ++ A ++TSL+GL L G LT L V
Sbjct: 89 VPAEIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVL 148
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQ T V E L L + L N++TS+ + + LT L L LS NQLT +
Sbjct: 149 VLGGNQFTSV-PAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTS-VPA 206
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L L+ ++L YN++
Sbjct: 207 EIGQLTLLKGLELYYNQLTSL 227
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L+ L L L+ N L SL ++G L+ L+ L + NQL ++P++I + L L NR+
Sbjct: 27 LSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRL 86
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
S+ + LT L+ N++ NQ+T V E L +L+ + L N++TS+ + LT L
Sbjct: 87 MSVPAEIGQLTSLRELNLNSNQLTNV-PAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSL 145
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L NQ T + +I L LR + L N++
Sbjct: 146 VVLVLGGNQFTS-VPAEIGQLTALRELRLDGNRLTSV 181
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 28/201 (13%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL------------------- 102
++ L + +N LTSL + LT L L L+NN+L S+ ++
Sbjct: 214 LKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDDGHWEG 273
Query: 103 -----GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
G + KL L +E + ALP+++ S L L N +TS+ + LT L F
Sbjct: 274 VTMENGRVVKLDL--VEFGLIGALPAEVGRLSALRWLQLGGNNLTSVPAEIGQLTSLMTF 331
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ N++T V E L +L+ + L +N++ SM + + LT L L+LS N+LT +
Sbjct: 332 GLSDNKLTSV-PAEIGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTS-VPA 389
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L L+ + LS N++
Sbjct: 390 EIGQLTSLKGLHLSRNQLTSV 410
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 29 LTSDDLKGTPALIT-------LLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLR 80
L S+ L PA I L L N +T + E T + L +G N TS+ +
Sbjct: 104 LNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQFTSVPAEIG 163
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT L L L+ NRL S+ ++G L+ L L + NQL ++P++I + L L N+
Sbjct: 164 QLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGLELYYNQ 223
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-----------NLDSISLQNNQIT 189
+TSL + LT L+ +D NQ+T V E + L + + ++++N ++
Sbjct: 224 LTSLPAEIGQLTSLEHLLLDNNQLTSV-PAEIRELRAAGCRVDLDDGHWEGVTMENGRVV 282
Query: 190 SMN-----------SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++ + + L+ L +L L N LT + +I L L T LS NK+
Sbjct: 283 KLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTS-VPAEIGQLTSLMTFGLSDNKLTSV 341
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
AL L L N +T + E ++ L + N LTS+ + LT L L+L++NRL S
Sbjct: 442 ALRLLQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTS 501
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG----LLRGLTK 153
L ++G L+ L+ L ++ NQL ++P++I + L N +TS+ LLRG +
Sbjct: 502 LPAEIGQLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVPAEIGQLLRG--R 559
Query: 154 LQVFNMD 160
L+ +N+D
Sbjct: 560 LRSWNVD 566
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P+++ S L L + N +TSL + LT L+ + NQ+T V E L L
Sbjct: 19 VVPAELGRLSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSV-PAEIGQLTALR 77
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+SL N++ S+ + + LT L L L+ NQLT
Sbjct: 78 ELSLAANRLMSVPAEIGQLTSLRELNLNSNQLT 110
>gi|291236280|ref|XP_002738068.1| PREDICTED: leucine rich repeat containing 40-like [Saccoglossus
kowalevskii]
Length = 1970
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 13/210 (6%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDL 85
+DL G +L L + +N I I P T+ +LH NNL + L LT+L
Sbjct: 799 EDLTGLSSLEDLDISDNKIDEI-----PSTVSELHSLTNLNAHANNLNVVPVELCTLTNL 853
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
+L L+ N L L L +L+ L I++N+LE LP+D+ L L A+ N IT +
Sbjct: 854 CYLDLSKNHLSCLPDDFCNLRQLRQLYIQENELECLPADMHKLDGLQLLQASQNCITEIS 913
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
L++L++ ++ NQIT + D F L L+ + L NQI ++ SS+S L +L
Sbjct: 914 NNTCILSELEMLDISHNQITEI-PDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFA 972
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ NQL+E L I L+ L+ +D+S N+I
Sbjct: 973 IRRNQLSE-LPKCIGDLQLLQQLDISGNQI 1001
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 52 HIHEN---AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
+I EN P + KL N +T ++N+ L++L L +++N++ +
Sbjct: 880 YIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILSELEMLDISHNQITEIPDTF 939
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L L L + NQ+ +PS I QL N+++ L + L LQ ++ N
Sbjct: 940 GKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSELPKCIGDLQLLQQLDISGN 999
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
QITMV + L L + L +NQ+TSM ++ L KL L+ +N+LT + +I+ +
Sbjct: 1000 QITMV-PETIGVLKELTKLELGDNQLTSMTPNIGLLCKLEELHARNNKLTS-IPREIKRI 1057
Query: 223 KRLRTVDLSYNKI 235
LRT+ L N+I
Sbjct: 1058 TTLRTISLRGNEI 1070
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 30 TSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
D + P + TL+L NNNI N FP +I L L
Sbjct: 1163 VPDIISTLPKMSTLVLRNNNI-----NEFPCSI--------------------VSLKELD 1197
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
++NN ++ + + TL +L L + N L LP + + L L ++N+I S+ +R
Sbjct: 1198 ISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDNQIVSISTDIR 1257
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
LT L+VF++ N++T + DE NL L+ + L +N I + SS++ LT L+ L +S+N
Sbjct: 1258 SLTNLKVFDISKNKLTEI-PDEIGNLVALERLYLSSNTIQIIPSSIARLTNLSELNISNN 1316
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + D I L +L+ ++L N+I
Sbjct: 1317 -IISCIPDGIYALTKLQRLNLMRNQI 1341
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+ +L++ N + S++ +R LT+L ++ N+L + ++G L L+ L + N ++
Sbjct: 1238 TLVQLNLSDNQIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNLVALERLYLSSNTIQI 1297
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+PS I + L L +NN I+ + + LTKLQ N
Sbjct: 1298 IPSSIARLTNLSELNISNNIISCIPDGIYALTKLQRLN---------------------- 1335
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L NQI ++ S+ + +L L +SHN L+ L I+ L+ L +DL N
Sbjct: 1336 --LMRNQIKDLSESVGKMVELVVLDISHNDLSIIPL-SIKNLQMLEILDLQGN 1385
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 4/194 (2%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
L N+I+ I ++ P + KL + N LT + S+ L +L L+NN + + +G
Sbjct: 379 LSGNSISVIPDSCQYP-LAKLDISDNKLTKVPKSISQLHELEEFNLSNNAIYHVSPFIGE 437
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
L++L +L I N+LE LP D + L L + N++ + + L L+ ++ N +
Sbjct: 438 LNQLLILDIHNNKLEELPLDFWNLTSLNKLDLHENKLNEISERISQLQNLRELDLSRNNL 497
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
++V F L + S+ + +N + + S + +T L L LS N++TE + + L +
Sbjct: 498 SVVPSGCF--LPQIHSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITE-IPSTVCDLYQ 554
Query: 225 LRTVDLSYNKINKF 238
L ++L NKI K
Sbjct: 555 LSHLNLKKNKIPKL 568
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T+L L L NN+L SL ++ L+ L+ + + N L +P I ++ +L NN I
Sbjct: 1125 TNLIELDLQNNKLHSLPLEISRLNMLEKINLSNNLLSDVPDIISTLPKMSTLVLRNNNIN 1184
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
+ L +L + N N I ++ D L+ L+ + + +N + + +L +T L
Sbjct: 1185 EFPCSIVSLKELDISN---NNIQIIPTD-IHTLYQLNRLDVSSNSLRELPDTLYKVTTLV 1240
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LS NQ+ + DIR L L+ D+S NK+ +
Sbjct: 1241 QLNLSDNQIVS-ISTDIRSLTNLKVFDISKNKLTEI 1275
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ + + N L+ L + L L L L+ N +S+ + L +L L + N L +
Sbjct: 34 VKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSMPTPIIHLQQLTSLSVNINDLAEI 93
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+++ + L L N+I + + L L FN+ N +T + E L +L+ I
Sbjct: 94 PTELYNITALTELSLFKNKIQEISPGISKLKNLIKFNIKDNMVTEIPA-EIGKLKHLEEI 152
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ NQ+T + S+ GL LA +S N ++ + +I L +L+ ++S N++
Sbjct: 153 DISKNQVTQIPKSVDGLVHLAKFDISQNHVS-VIPGEIGCLTQLQIFNISNNQV 205
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N + ++ + L +L + +N + + ++G L L+ + I +NQ+ +P +
Sbjct: 111 NKIQEISPGISKLKNLIKFNIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLV 170
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLDSISLQNNQ 187
L + N ++ + G + LT+LQ+FN+ NQ+ + Q LH D + +N+
Sbjct: 171 HLAKFDISQNHVSVIPGEIGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFD---IAHNR 227
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+TS+ + + +L L L+ N L +
Sbjct: 228 LTSLPRDIKSMIELKELSLTGNNLKDI 254
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N +T + ++L+ L ++NN L L L LS L+ L I N+++ +
Sbjct: 761 VKNLDLSANKITEFSCPFPNFSNLSRLNVSNNILTQLPEDLTGLSSLEDLDISDNKIDEI 820
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS + L +L A+ N + + L LT L ++ N ++ + D+F NL L +
Sbjct: 821 PSTVSELHSLTNLNAHANNLNVVPVELCTLTNLCYLDLSKNHLSCL-PDDFCNLRQLRQL 879
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+Q N++ + + + L L L S N +TE + ++ L L +D+S+N+I +
Sbjct: 880 YIQENELECLPADMHKLDGLQLLQASQNCITE-ISNNTCILSELEMLDISHNQITEI 935
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL------------------ 102
T++KL++ FN+ S+ + L L L +N N L + +L
Sbjct: 56 TLQKLNLSFNDFRSMPTPIIHLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQE 115
Query: 103 --GTLSKLQLLV---IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+SKL+ L+ I+ N + +P++I L + + N++T + + GL L F
Sbjct: 116 ISPGISKLKNLIKFNIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKF 175
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ N ++++ E L L ++ NNQ+ + ++ L L ++HN+LT L
Sbjct: 176 DISQNHVSVI-PGEIGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTS-LPR 233
Query: 218 DIRGLKRLRTVDLSYN 233
DI+ + L+ + L+ N
Sbjct: 234 DIKSMIELKELSLTGN 249
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
K + N L+ L + L L L ++ N++ + +G L +L L + NQL ++
Sbjct: 970 KFAIRRNQLSELPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTSMTP 1029
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN--------- 174
+I L +L L+A NN++TS+ ++ +T L+ ++ N+I +E +N
Sbjct: 1030 NIGLLCKLEELHARNNKLTSIPREIKRITTLRTISLRGNEIEDPPINECENYFQLLSNYW 1089
Query: 175 -------------------------------LH---NLDSISLQNNQITSMNSSLSGLTK 200
+H NL + LQNN++ S+ +S L
Sbjct: 1090 DEQELRILEPFDVSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNM 1149
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L + LS+N L++ + D I L ++ T+ L N IN+F
Sbjct: 1150 LEKINLSNNLLSD-VPDIISTLPKMSTLVLRNNNINEFPC 1188
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ ++ + N +T + S+ GL L ++ N + + G++G L++LQ+ I NQ++ +
Sbjct: 149 LEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEIGCLTQLQIFNISNNQVKDI 208
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR------------ 169
P I L +NR+TSL ++ + +L+ ++ N + + R
Sbjct: 209 PPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGNNLKDIPRHIYEKGIVEIRQ 268
Query: 170 ----DEFQNLHNLD----SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+E + + ++D I L + +T + S + T + L +S+N L + ++
Sbjct: 269 YWETEEVELMKDIDVLSEDIKLGSRSLTYLPSMIGQYTNVKALNISNNSLMSLPM-ELAK 327
Query: 222 LKRLRTVDLSYN 233
L++L ++LS N
Sbjct: 328 LQQLEELNLSDN 339
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T ++ + ++T + + TDL L + NR+ + +L L+KL+ L + N +
Sbjct: 671 TTDEITITQRDMTYIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQE 730
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P I +L L+ +NN++T +F N+ N+ +
Sbjct: 731 IPVSIFQLGKLKILHLSNNKLT-------------IFPT--------------NIGNVKN 763
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ L N+IT + + L+ L +S+N LT+ L +D+ GL L +D+S NKI++ +
Sbjct: 764 LDLSANKITEFSCPFPNFSNLSRLNVSNNILTQ-LPEDLTGLSSLEDLDISDNKIDEIPS 822
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 26/198 (13%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP- 122
KL +G N LTS+ ++ L L L NN+L S+ ++ ++ L+ + + N++E P
Sbjct: 1016 KLELGDNQLTSMTPNIGLLCKLEELHARNNKLTSIPREIKRITTLRTISLRGNEIEDPPI 1075
Query: 123 SDIQLFSQLGSLYAN------------NNRITSLDG--------LLRGLTKLQVFNMDFN 162
++ + + QL S Y + + R LDG L+ T L ++ N
Sbjct: 1076 NECENYFQLLSNYWDEQELRILEPFDVSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNN 1135
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
++ + E L+ L+ I+L NN ++ + +S L K++ L L +N + EF +
Sbjct: 1136 KLHSLPL-EISRLNMLEKINLSNNLLSDVPDIISTLPKMSTLVLRNNNINEFPC----SI 1190
Query: 223 KRLRTVDLSYNKINKFGT 240
L+ +D+S N I T
Sbjct: 1191 VSLKELDISNNNIQIIPT 1208
>gi|320168281|gb|EFW45180.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 794
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
+ ++ G AL TL L +N IT I NAF + L + N ++S+ N+ GL+ L
Sbjct: 94 IPANAFSGLTALNTLQLFSNQITSIPANAFADLAALTSLDLFVNQISSIPANAFTGLSAL 153
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L LN N++ S+ + L+ L L + NQL + ++ + L SL N +T
Sbjct: 154 TQLRLNTNQITSIPDNVFADLTSLNGLGLSSNQLTVISANAFNGLTALTSLMLGLNPMTV 213
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
LT L+ M+ QI + D F +L L SI+L++N IT++ + + +GL+ L
Sbjct: 214 FPSAAFASLTALESLQMEAGQIASISADTFPDLTALTSINLRDNPITTIAANAFTGLSAL 273
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+YL +N +T GL L +DLS N+IN
Sbjct: 274 KMIYLQNNLITSISATAFTGLTALTALDLSVNQINS 309
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+ ++ G AL L L N IT I +N F ++ L + N LT ++ N+ GLT L
Sbjct: 142 IPANAFTGLSALTQLRLNTNQITSIPDNVFADLTSLNGLGLSSNQLTVISANAFNGLTAL 201
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN---NRI 141
L L N + +L+ L+ L +E Q+ ++ +D F L +L + N N I
Sbjct: 202 TSLMLGLNPMTVFPSAAFASLTALESLQMEAGQIASISADT--FPDLTALTSINLRDNPI 259
Query: 142 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLT 199
T++ GL+ L++ + N IT + F L L ++ L NQI S+++ + SGLT
Sbjct: 260 TTIAANAFTGLSALKMIYLQNNLITSISATAFTGLTALTALDLSVNQINSLSANTFSGLT 319
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L Y++L N+LT D + L VDLS N I+
Sbjct: 320 ALLYVHLGANRLTSIPADALARLPAGAGVDLSKNLISS 357
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 7/216 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+++D AL ++ L +N IT I NAF ++ +++ N +TS++ + GLT L
Sbjct: 238 ISADTFPDLTALTSINLRDNPITTIAANAFTGLSALKMIYLQNNLITSISATAFTGLTAL 297
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS-LYANNNRITS 143
L L+ N++ SL L+ L + + N+L ++P+D G+ + + N I+S
Sbjct: 298 TALDLSVNQINSLSANTFSGLTALLYVHLGANRLTSIPADALARLPAGAGVDLSKNLISS 357
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GLT L + N IT + F +++ L ++L NN ITS+++ + +GLT L
Sbjct: 358 VSADEFAGLTALGGLVLSSNLITTIPAGAFASMNALILLALDNNTITSISANAFTGLTAL 417
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
YLYL NQ+T +D L L+ + L N+I
Sbjct: 418 QYLYLGLNQITSIPVDAFTSLTALQYLRLDGNQITS 453
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+ ++ G AL + L NN IT I AF + L + N + SL+ N+ GLT L
Sbjct: 262 IAANAFTGLSALKMIYLQNNLITSISATAFTGLTALTALDLSVNQINSLSANTFSGLTAL 321
Query: 86 NWLFLNNNRLKSLEG-------------------------QLGTLSKLQLLVIEQNQLEA 120
++ L NRL S+ + L+ L LV+ N +
Sbjct: 322 LYVHLGANRLTSIPADALARLPAGAGVDLSKNLISSVSADEFAGLTALGGLVLSSNLITT 381
Query: 121 LPSDIQLFSQLGSL---YANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+P+ F+ + +L +NN ITS+ GLT LQ + NQIT + D F +L
Sbjct: 382 IPAGA--FASMNALILLALDNNTITSISANAFTGLTALQYLYLGLNQITSIPVDAFTSLT 439
Query: 177 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLT 212
L + L NQITS+ + + + LT L L L+ N T
Sbjct: 440 ALQYLRLDGNQITSVPATAFADLTALVGLTLNGNLFT 476
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDE 171
E L +PS I + + SLY +N+ITS+ GLT L + NQIT + +
Sbjct: 41 CEGRGLTTIPSGIPVETTTLSLY--SNQITSIPANAFSGLTALATLMLHGNQITSIPANA 98
Query: 172 FQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
F L L+++ L +NQITS+ + + + L L L L NQ++ + GL L + L
Sbjct: 99 FSGLTALNTLQLFSNQITSIPANAFADLAALTSLDLFVNQISSIPANAFTGLSALTQLRL 158
Query: 231 SYNKINKF 238
+ N+I
Sbjct: 159 NTNQITSI 166
>gi|254416421|ref|ZP_05030174.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176859|gb|EDX71870.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 477
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 113/202 (55%), Gaps = 9/202 (4%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L G +L L+L +N IT I + + L++ N +T ++ L GLT+L+ L+LNNN
Sbjct: 226 LSGLTSLTVLILSDNQITDISPLSGLTNLDALYLNNNQITDIS-PLSGLTNLDALYLNNN 284
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
++ + L L+ L L + NQ+ + S + + L +LY N+N+IT + LL GLT
Sbjct: 285 QITDIS-PLSGLTNLDALYLNNNQITDI-SPLSGLTNLDALYLNSNQITDI-SLLSGLTN 341
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L ++ NQIT + L NL+ + L NNQIT + S LSGLT L L L +NQ+T+
Sbjct: 342 LDALYLNSNQITDIS--PLLELTNLNYLILDNNQITDI-SPLSGLTNLTILILDNNQITD 398
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
+ + GL L + L+ N+I
Sbjct: 399 --ISPLSGLTNLGGLILNSNQI 418
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L G L L L NN IT I + + L++ N +T ++ L GLT+L+ L+LNNN
Sbjct: 248 LSGLTNLDALYLNNNQITDISPLSGLTNLDALYLNNNQITDIS-PLSGLTNLDALYLNNN 306
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNNRITSLDGLLRG 150
++ + L L+ L L + NQ+ +DI L S L +LY N+N+IT + LL
Sbjct: 307 QITDIS-PLSGLTNLDALYLNSNQI----TDISLLSGLTNLDALYLNSNQITDISPLLE- 360
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
LT L +D NQIT + L NL + L NNQIT + S LSGLT L L L+ NQ
Sbjct: 361 LTNLNYLILDNNQITDIS--PLSGLTNLTILILDNNQITDI-SPLSGLTNLGGLILNSNQ 417
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKI 235
+T+ + + GL L ++L+ N+I
Sbjct: 418 ITD--VSPLSGLTNLTVLNLNSNQI 440
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 8/160 (5%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L GLT L L L +N++ + L L+ L +L++ NQ+ + S + + L +LY NN
Sbjct: 204 LSGLTSLTVLILYSNQITDIS-SLSGLTSLTVLILSDNQITDI-SPLSGLTNLDALYLNN 261
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
N+IT + L GLT L ++ NQIT + L NLD++ L NNQIT + S LSGL
Sbjct: 262 NQITDISPL-SGLTNLDALYLNNNQITDIS--PLSGLTNLDALYLNNNQITDI-SPLSGL 317
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
T L LYL+ NQ+T+ L + GL L + L+ N+I
Sbjct: 318 TNLDALYLNSNQITDISL--LSGLTNLDALYLNSNQITDI 355
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 92/181 (50%), Gaps = 29/181 (16%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L G +L L+L +N IT I + ++ L + N +T ++ L GLT+L+ L+LNNN
Sbjct: 204 LSGLTSLTVLILYSNQITDISSLSGLTSLTVLILSDNQITDIS-PLSGLTNLDALYLNNN 262
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
++ + G + L +LY NNN+IT + L GLT
Sbjct: 263 QITDISPLSG------------------------LTNLDALYLNNNQITDISPL-SGLTN 297
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L ++ NQIT + L NLD++ L +NQIT + S LSGLT L LYL+ NQ+T+
Sbjct: 298 LDALYLNNNQITDIS--PLSGLTNLDALYLNSNQITDI-SLLSGLTNLDALYLNSNQITD 354
Query: 214 F 214
Sbjct: 355 I 355
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L G +L L L NN IT I + + L++ N +T ++ L GLT L L L N
Sbjct: 116 LSGLTSLTELYLNNNQITDISPLSGLTNLTVLNLNNNQITDIS-PLSGLTSLTGLILGGN 174
Query: 94 RLKSLE---------------------GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
++K + L L+ L +L++ NQ+ +DI S L
Sbjct: 175 QIKDVSPLSGLTNLTVLNLNNNQITDISPLSGLTSLTVLILYSNQI----TDISSLSGLT 230
Query: 133 SLYA---NNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
SL ++N+IT + L GLT L ++ NQIT + L NLD++ L NNQIT
Sbjct: 231 SLTVLILSDNQITDISPL-SGLTNLDALYLNNNQITDIS--PLSGLTNLDALYLNNNQIT 287
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ S LSGLT L LYL++NQ+T+ + + GL L + L+ N+I
Sbjct: 288 DI-SPLSGLTNLDALYLNNNQITD--ISPLSGLTNLDALYLNSNQITDI 333
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 100/222 (45%), Gaps = 57/222 (25%)
Query: 68 GFNNLTSLN---------NSLRGLTDLNWLFLNNNRLKSLE------------------- 99
G NLT LN +SL GLT L L+LNNN++ +
Sbjct: 96 GLTNLTVLNLWNNQITDISSLSGLTSLTELYLNNNQITDISPLSGLTNLTVLNLNNNQIT 155
Query: 100 --GQLGTLSKLQLLVIEQNQLEALP------------------SDIQLFSQLGSLYA--- 136
L L+ L L++ NQ++ + +DI S L SL
Sbjct: 156 DISPLSGLTSLTGLILGGNQIKDVSPLSGLTNLTVLNLNNNQITDISPLSGLTSLTVLIL 215
Query: 137 NNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 196
+N+IT + L GLT L V + NQIT + L NLD++ L NNQIT + S LS
Sbjct: 216 YSNQITDISSL-SGLTSLTVLILSDNQITDIS--PLSGLTNLDALYLNNNQITDI-SPLS 271
Query: 197 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
GLT L LYL++NQ+T+ + + GL L + L+ N+I
Sbjct: 272 GLTNLDALYLNNNQITD--ISPLSGLTNLDALYLNNNQITDI 311
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
L+ L + +NQI V L NL ++L NNQIT + SSLSGLT L LYL++NQ
Sbjct: 75 LSSLNYLVLGYNQIKDVS--PLSGLTNLTVLNLWNNQITDI-SSLSGLTSLTELYLNNNQ 131
Query: 211 LTEF 214
+T+
Sbjct: 132 ITDI 135
>gi|449119370|ref|ZP_21755766.1| hypothetical protein HMPREF9725_01231 [Treponema denticola H1-T]
gi|449121760|ref|ZP_21758106.1| hypothetical protein HMPREF9727_00866 [Treponema denticola MYR-T]
gi|448949201|gb|EMB30026.1| hypothetical protein HMPREF9727_00866 [Treponema denticola MYR-T]
gi|448950360|gb|EMB31182.1| hypothetical protein HMPREF9725_01231 [Treponema denticola H1-T]
Length = 370
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT LN ++GLT L L+ N+L +L+ Q L+ LQ L NQL AL ++Q +
Sbjct: 127 NKLTDLN--VQGLTALQELYCAYNQLTALDVQ--GLTALQWLQCNHNQLTAL--NVQGST 180
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L+ NNR+ L+ ++ LT LQ F+ D NQ+T + + Q L L ++ +NQ+T
Sbjct: 181 ALQGLFCRNNRLIELN--VQDLTALQKFDCDKNQLTAL---DVQGLTALQYLTCSDNQLT 235
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+++ + GLT L L+ NQL EF + D+ L+ LR D
Sbjct: 236 ALD--VQGLTALQGLFCYRNQLIEFNVQDLTALQYLRCAD 273
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 25/137 (18%)
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT-------------MVRRD 170
++Q + L LY N++T+LD ++GLT LQ + NQ+T R +
Sbjct: 133 NVQGLTALQELYCAYNQLTALD--VQGLTALQWLQCNHNQLTALNVQGSTALQGLFCRNN 190
Query: 171 EF-----QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
Q+L L NQ+T+++ + GLT L YL S NQLT D++GL L
Sbjct: 191 RLIELNVQDLTALQKFDCDKNQLTALD--VQGLTALQYLTCSDNQLTAL---DVQGLTAL 245
Query: 226 RTVDLSYNKINKFGTRN 242
+ + N++ +F ++
Sbjct: 246 QGLFCYRNQLIEFNVQD 262
>gi|417783921|ref|ZP_12431633.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|418699650|ref|ZP_13260605.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|409952752|gb|EKO07259.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|410761334|gb|EKR27517.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 288
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L I L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRIHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+I L LY N++T L + L +L ++ NQ ++ Q L
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPEQIAALKQLARLSLKGNQFPSEEKERIQRL 280
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ ++ L L +SL+ NQ S
Sbjct: 241 LEENQLTML-PEQIAALKQLARLSLKGNQFPS 271
>gi|418688697|ref|ZP_13249839.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400362083|gb|EJP18029.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 288
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L + L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRMHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+I L LY N++T L + L +L ++ NQ ++ Q L
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPSEEKERIQRL 280
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ + + L L +SL+ NQ S
Sbjct: 241 LEENQLTMLPK-QIAALKQLARLSLKGNQFPS 271
>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 356
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL++ N + ++ + L L WL+L N+L +L ++G L L+ L + NQ++ +
Sbjct: 96 LRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTI 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L SL +NN++T+L + L LQ ++ N++T + + E +L NL +
Sbjct: 156 PKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQ-EIGHLQNLQDL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +NQ+T + + + L L L L +N+LT L +I L+ L+++DL N++ F
Sbjct: 215 YLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT-LSKEIEQLQNLKSLDLRSNQLTIF 270
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L L ++G L L+ L + NQ+
Sbjct: 47 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQI 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L LY N++T+L + L L+ N+ +NQI + + E + L L
Sbjct: 107 KTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPK-EIEKLQKL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
S+ L NNQ+T++ + L L L LS N+LT
Sbjct: 166 QSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 199
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ + L L+ NR K+L ++G L LQ L + +NQL LP +I L
Sbjct: 38 TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L + N+I ++ + L KLQ + NQ+T + + E L NL S++L NQI ++
Sbjct: 98 KLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQ-EIGQLKNLKSLNLSYNQIKTIP 156
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL L L +NQLT L +I L+ L+++DLS N++
Sbjct: 157 KEIEKLQKLQSLGLDNNQLTT-LPQEIGQLQNLQSLDLSTNRL 198
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 8/193 (4%)
Query: 49 NITHIHENAFPPTIRKLH----VGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ P I KL +G +N LT+L + L +L L L+ NRL +L ++
Sbjct: 146 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 205
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + NQL LP++I L +L NNR+T+L + L L+ ++ N
Sbjct: 206 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 265
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T+ + E L NL + L +NQ+T++ + L L L L NQLT L +I L
Sbjct: 266 QLTIFPK-EIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT-LPQEIGQL 323
Query: 223 KRLRTVDLSYNKI 235
+ L+ + L+ N++
Sbjct: 324 QNLQELFLNNNQL 336
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T + +E ++ L++ N LT+L+ + L +L L L +N+L +
Sbjct: 214 LYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE 273
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ+L + NQL LP I L +L ++N++T+L + L LQ ++
Sbjct: 274 IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNN 333
Query: 162 NQITMVRRDEFQNL 175
NQ++ + + L
Sbjct: 334 NQLSSQEKKRIRKL 347
>gi|449131703|ref|ZP_21767911.1| hypothetical protein HMPREF9724_02576 [Treponema denticola SP37]
gi|448938562|gb|EMB19492.1| hypothetical protein HMPREF9724_02576 [Treponema denticola SP37]
Length = 424
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 24/235 (10%)
Query: 15 LNLIDLEPETGSHPL-------TSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV 67
L +D+ TG H L T+ D++G AL L +N I + + L
Sbjct: 116 LTSLDVRELTGLHTLYCGKNRFTALDIRGLTALQELYCNDNEIASLDVRGLTG-LHTLDC 174
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N LTSL+ ++GLT L WL + N+L SL+ + L+ LQ+L N+L +L D+ +
Sbjct: 175 DNNRLTSLD--VQGLTALQWLDCHFNKLTSLD--VHGLTSLQVLECSSNRLTSL--DVHV 228
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
+ L +LY +N++TSLD +RGLT L+ N++T + L LD S N
Sbjct: 229 LTALKNLYCQDNKLTSLD--VRGLTGLRTLFCSSNRLTALDVRRLTALQKLDCSS---NA 283
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
I S++ + GLT L LY +N+LT D++GL L+ + S N++ ++
Sbjct: 284 IASID--VRGLTGLHTLYCDNNRLTSL---DVQGLTALQLLVCSDNQLTALNVQD 333
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 14/197 (7%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ S D++G L TL NN +T + ++ L FN LTSL+ + GLT L L
Sbjct: 158 IASLDVRGLTGLHTLDCDNNRLTSLDVQGLTA-LQWLDCHFNKLTSLD--VHGLTSLQVL 214
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
++NRL SL+ + L+ L+ L + N+L +L D++ + L +L+ ++NR+T+LD +
Sbjct: 215 ECSSNRLTSLD--VHVLTALKNLYCQDNKLTSL--DVRGLTGLRTLFCSSNRLTALD--V 268
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
R LT LQ + N I + + + L L ++ NN++TS++ + GLT L L S
Sbjct: 269 RRLTALQKLDCSSNAIASI---DVRGLTGLHTLYCDNNRLTSLD--VQGLTALQLLVCSD 323
Query: 209 NQLTEFLLDDIRGLKRL 225
NQLT + D+ L+ L
Sbjct: 324 NQLTALNVQDLPTLQAL 340
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LTS D++G L TL +N +T + ++KL N + S++ +RGLT L+ L
Sbjct: 242 LTSLDVRGLTGLRTLFCSSNRLTALDVRRLTA-LQKLDCSSNAIASID--VRGLTGLHTL 298
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+ +NNRL SL+ Q L+ LQLLV NQL AL ++Q L +L +NR+ D L+
Sbjct: 299 YCDNNRLTSLDVQ--GLTALQLLVCSDNQLTAL--NVQDLPTLQALGFQHNRLEE-DALI 353
Query: 149 RGLTKL 154
R L L
Sbjct: 354 RILNSL 359
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 29/147 (19%)
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-----GL--------------LRGL 151
LV +N+L +L D++ + L LY +N +TSLD GL +RGL
Sbjct: 88 LVCYKNRLTSL--DVRGLTTLQELYCQDNILTSLDVRELTGLHTLYCGKNRFTALDIRGL 145
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
T LQ + N+I + LH LD NN++TS++ + GLT L +L N+L
Sbjct: 146 TALQELYCNDNEIASLDVRGLTGLHTLDC---DNNRLTSLD--VQGLTALQWLDCHFNKL 200
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
T D+ GL L+ ++ S N++
Sbjct: 201 TSL---DVHGLTSLQVLECSSNRLTSL 224
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E+ L A + + L L L NR+TSLD +RGLT LQ N +T + E
Sbjct: 68 EETVLTATGTKVVLKGALIELVCYKNRLTSLD--VRGLTTLQELYCQDNILTSLDVRELT 125
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
LH L N+ T+++ + GLT L LY + N++ D+RGL L T+D N
Sbjct: 126 GLHTL---YCGKNRFTALD--IRGLTALQELYCNDNEIASL---DVRGLTGLHTLDCDNN 177
Query: 234 KINKF 238
++
Sbjct: 178 RLTSL 182
>gi|418666378|ref|ZP_13227803.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|421128065|ref|ZP_15588283.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136636|ref|ZP_15596738.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019242|gb|EKO86065.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410434532|gb|EKP83670.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410757871|gb|EKR19476.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 288
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L I L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRIHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+I L LY N++T L + L +L ++ NQ ++ Q L
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPSEEKERIQRL 280
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ + + L L +SL+ NQ S
Sbjct: 241 LEENQLTMLPK-QIAALKQLARLSLKGNQFPS 271
>gi|320169490|gb|EFW46389.1| hypothetical protein CAOG_04357 [Capsaspora owczarzaki ATCC 30864]
Length = 620
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 7/198 (3%)
Query: 48 NNITHIHENAFPPTIRKLHVGFN--NLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQL-G 103
N IT I + AF L +G N +TS++ N+ GLT L++L L+NN+L S+ +
Sbjct: 115 NQITSISDGAFTGLTAVLELGLNRNQITSISANAFTGLTGLHFLELSNNQLTSIPSSVFA 174
Query: 104 TLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDF 161
+++ L L++ +N++ ++P S + L +L +N ITS+ GL+ L V ++
Sbjct: 175 SVTTLLDLLLYKNRITSIPTSAFTTLTALKTLRLYDNPITSISANAFEGLSALTVLHLSS 234
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N IT + F L L+++ L NQI+++ S+ +GLT + LYL N++T +
Sbjct: 235 NHITSILPSSFTGLTALEALLLDKNQISNIPASAFTGLTAMQTLYLDSNRITSISTNAFT 294
Query: 221 GLKRLRTVDLSYNKINKF 238
GL L + L N+I +
Sbjct: 295 GLTALTYMYLDSNQITRI 312
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFL 90
G AL L L +N IT I +AF ++ +L + N +TS+++ + GLT + L L
Sbjct: 77 FSGLTALTWLYLDSNQITSISASAFSDLTSLEQLRMEENQITSISDGAFTGLTAVLELGL 136
Query: 91 NNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD-GL 147
N N++ S+ T L+ L L + NQL ++PS + + L L NRITS+
Sbjct: 137 NRNQITSISANAFTGLTGLHFLELSNNQLTSIPSSVFASVTTLLDLLLYKNRITSIPTSA 196
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYL 206
LT L+ + N IT + + F+ L L + L +N ITS + SS +GLT L L L
Sbjct: 197 FTTLTALKTLRLYDNPITSISANAFEGLSALTVLHLSSNHITSILPSSFTGLTALEALLL 256
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
NQ++ GL ++T+ L N+I T
Sbjct: 257 DKNQISNIPASAFTGLTAMQTLYLDSNRITSIST 290
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 12/185 (6%)
Query: 40 LITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLK 96
L+ LLL N IT I +AF ++ L + N +TS++ N+ GL+ L L L++N +
Sbjct: 179 LLDLLLYKNRITSIPTSAFTTLTALKTLRLYDNPITSISANAFEGLSALTVLHLSSNHIT 238
Query: 97 S-LEGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDG-LLRGLTK 153
S L L+ L+ L++++NQ+ +P S + + +LY ++NRITS+ GLT
Sbjct: 239 SILPSSFTGLTALEALLLDKNQISNIPASAFTGLTAMQTLYLDSNRITSISTNAFTGLTA 298
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT---KLAYL--YLS 207
L +D NQIT + + F L L ++L N T++ L GL LAY YLS
Sbjct: 299 LTYMYLDSNQITRIPANAFTGLTALTYLTLDGNPFTTLPPGLFKGLPNGLALAYFFQYLS 358
Query: 208 HNQLT 212
N T
Sbjct: 359 PNNFT 363
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLV 112
+ P T R L++ N + S+ + GLT L WL+L++N++ S+ L+ L+ L
Sbjct: 52 PSGIPVTTRALYLSNNQIASIPAYAFSGLTALTWLYLDSNQITSISASAFSDLTSLEQLR 111
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E+NQ ITS+ DG GLT + ++ NQIT + +
Sbjct: 112 MEENQ-----------------------ITSISDGAFTGLTAVLELGLNRNQITSISANA 148
Query: 172 FQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
F L L + L NNQ+TS+ SS+ + +T L L L N++T L L+T+ L
Sbjct: 149 FTGLTGLHFLELSNNQLTSIPSSVFASVTTLLDLLLYKNRITSIPTSAFTTLTALKTLRL 208
Query: 231 SYNKINKF 238
N I
Sbjct: 209 YDNPITSI 216
>gi|429962037|gb|ELA41581.1| hypothetical protein VICG_01329 [Vittaforma corneae ATCC 50505]
Length = 425
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 2/185 (1%)
Query: 51 THIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+H +P K+ + F +TS++++++ L L L+L NN LKSL ++G L L+
Sbjct: 88 SHYSFERYPENETKVSIPFQGITSIDSNIKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKT 147
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L ++ N L+ LPS+I+ L LY ++N +L + L LQ ++ N++ +
Sbjct: 148 LHLDNNNLKTLPSEIRRLVSLRKLYLSDNNFKTLPVEIGELKNLQELSLSGNKLKALSA- 206
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL ++L N+ + + + L L LY N+LT L +IR LK L+ + L
Sbjct: 207 EIGKLVNLQDLNLNGNEFELLPAEIGKLENLNVLYFRSNKLTT-LPAEIRELKNLQYLYL 265
Query: 231 SYNKI 235
YNK+
Sbjct: 266 DYNKL 270
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 16 NLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNI-THIHENAFPPTIRKLHVGFNNLTS 74
NL L PE G DL L TL L NNN+ T E ++RKL++ NN +
Sbjct: 131 NLKSLPPEIG-------DLVN---LKTLHLDNNNLKTLPSEIRRLVSLRKLYLSDNNFKT 180
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L + L +L L L+ N+LK+L ++G L LQ L + N+ E LP++I L L
Sbjct: 181 LPVEIGELKNLQELSLSGNKLKALSAEIGKLVNLQDLNLNGNEFELLPAEIGKLENLNVL 240
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +N++T+L +R L LQ +D+N++ + D L NL + N++ S+ S
Sbjct: 241 YFRSNKLTTLPAEIRELKNLQYLYLDYNKLETLPSD-IGELKNLQYLHFNCNKLKSLPSE 299
Query: 195 LSGLTKLAYLYLSHNQL 211
+ L L YL L +N+L
Sbjct: 300 IGELKNLQYLDLRNNKL 316
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 33/156 (21%)
Query: 45 LVNNNITHIHEN---AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
L N N+ + N P IR+L ++ +N L +L + + L +L +L N N+L
Sbjct: 234 LENLNVLYFRSNKLTTLPAEIRELKNLQYLYLDYNKLETLPSDIGELKNLQYLHFNCNKL 293
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLE-----------------------ALPSDIQLFSQLG 132
KSL ++G L LQ L + N+L+ LPS+I LG
Sbjct: 294 KSLPSEIGELKNLQYLDLRNNKLKILPSEIGKLKNLLYLVLNNNELTTLPSEIGELENLG 353
Query: 133 SLYANNNRITSLDGLLRGLT-KLQVFNMDFNQITMV 167
L + N + +L +R L+ LQ+ + N I+ +
Sbjct: 354 ELDLSGNNLETLPNTIRKLSGSLQLLYLRGNNISEI 389
>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 356
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L ++ L +L L L NN+ K+L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ LP +I L +L + NR+T+ + L LQ N+D+NQ+T + + E L +L
Sbjct: 107 KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQ-EIGQLQSL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L N++ ++ + + L L LYLS+NQLT L ++I LK L+ + L N++
Sbjct: 166 QKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLT-ILPEEIGQLKNLQALILGDNQL 221
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+ + L +L L L+ N+L +L ++G L LQ L +++N+L+AL
Sbjct: 119 LQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKAL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I L LY +NN++T L + L LQ + NQ+T++ ++ + QNL L
Sbjct: 179 PNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLY 238
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ NN++T + + L KL YLYLSHNQLT L +I L+ L+ + L+ N++
Sbjct: 239 SV---NNELTILPQEIGQLQKLQYLYLSHNQLTT-LPKEIGQLENLQELYLNDNQL 290
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++KL++ N L +L N + L +L L+L+NN+L L ++G L LQ L++ NQL
Sbjct: 164 SLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTI 223
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L LY+ NN +T L + L KLQ + NQ+T + + E L NL
Sbjct: 224 LPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPK-EIGQLENLQE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +NQ+T++ + L L +NQLT L +I L+ L+ + L+ N++
Sbjct: 283 LYLNDNQLTTLPKEIGQLKNLQTFISFNNQLT-MLPQEIGQLQNLQWLKLNNNQL 336
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 111/218 (50%), Gaps = 21/218 (9%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSL 75
L ++ LK P I TL+L N +T FP I +KL++ +N LT+L
Sbjct: 101 LWNNQLKNLPKEIGQLQNLQTLILSVNRLT-----TFPQEIGQLKNLQKLNLDYNQLTTL 155
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
+ L L L L+ NRLK+L ++G L LQ L + NQL LP +I L +L
Sbjct: 156 LQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+N++T L + L L++ N++T++ + E L L + L +NQ+T++ +
Sbjct: 216 LGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQ-EIGQLQKLQYLYLSHNQLTTLPKEI 274
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L L LYL+ NQLT L +I LK L+T +S+N
Sbjct: 275 GQLENLQELYLNDNQLTT-LPKEIGQLKNLQTF-ISFN 310
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L NN +T + E ++ L +G N LT L + L +L L+ NN L L +
Sbjct: 191 LYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQE 250
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L KLQ L + NQL LP +I L LY N+N++T+L + L LQ F
Sbjct: 251 IGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFN 310
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITS 190
NQ+TM+ + E L NL + L NNQ++S
Sbjct: 311 NQLTMLPQ-EIGQLQNLQWLKLNNNQLSS 338
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L L +L+L++N+L +L ++G L LQ L + NQL LP +I
Sbjct: 242 NELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLK 301
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
L + + NN++T L + L LQ ++ NQ++ + Q L
Sbjct: 302 NLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEERIQKL 347
>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
Length = 1082
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT + L L +L L L+ N+L + L L L++L + NQL +L
Sbjct: 154 LKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTSL 213
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ + L LY +N++ ++ L L L + ++ +NQ+T + EF L NL +
Sbjct: 214 PPELAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSL-PPEFAQLKNLKEL 272
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+TS+ + L L +LYL NQL L + LK L +DL N+++
Sbjct: 273 HLSGNQLTSLPPEFAQLKNLTWLYLRSNQLAN-LPPEFAQLKNLTELDLRDNQLS 326
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ +LT++ +L L +L + L+NN+L S+ +L L KL L + NQL +LP
Sbjct: 18 ELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLPP 77
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
++ L LY +NN+ T++ L L L+ + NQ+T V E +L NL+ + L
Sbjct: 78 ELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSV-PPELAHLENLNKLDL 136
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++NQ+TS+ L+ L L LYLS NQLT + ++ L+ L + LS N++
Sbjct: 137 RDNQLTSVPPELAHLENLKELYLSANQLTH-IPQELAQLRNLTLLSLSANQL 187
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L L L NN +T + PP + +L ++ N T++ L L +L L ++N
Sbjct: 62 LTALDLSNNQLT-----SLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSN 116
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L S+ +L L L L + NQL ++P ++ L LY + N++T + L L
Sbjct: 117 QLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRN 176
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L + ++ NQ+T V +L NL+ +SL+ NQ+TS+ L+ L L LYL N+L
Sbjct: 177 LTLLSLSANQLTGV-PPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKLIN 235
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
+ ++ L+ L + LSYN++
Sbjct: 236 -VPPELAHLEHLTLLSLSYNQL 256
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 42/198 (21%)
Query: 29 LTSDDLKGTPA-------LITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSL 75
L+++ L G P L L L N +T + PP + R+L++ N L ++
Sbjct: 182 LSANQLTGVPPALAHLENLEVLSLRTNQLT-----SLPPELAHLANLRELYLRSNKLINV 236
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
L L L L L+ N+L SL + L L+ L + NQL +LP + L LY
Sbjct: 237 PPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLY 296
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+N++ +L EF L NL + L++NQ+++++ +
Sbjct: 297 LRSNQLANLPP------------------------EFAQLKNLTELDLRDNQLSNISPEI 332
Query: 196 SGLTKLAYLYLSHNQLTE 213
A L QL E
Sbjct: 333 LAQGTAAILGHLQEQLQE 350
>gi|418723939|ref|ZP_13282773.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|421120177|ref|ZP_15580491.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|409962737|gb|EKO26471.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|410347263|gb|EKO98182.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|456825272|gb|EMF73668.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 288
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L I L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRIHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTD---LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
KL + T L + + D LN+ N LK+L ++G L L+ L + N++
Sbjct: 28 KLPLKPGEYTDLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITT 87
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L L N NR+ ++ + L L+ ++++N++ + + E NL NL
Sbjct: 88 LPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPK-EIGNLKNLKE 146
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L NQ+ + + L KL ++LS N+LT+ L +I+ L+ L + L N+
Sbjct: 147 LYLSRNQLKILPQEIGNLRKLQRIHLSTNELTK-LPQEIKNLESLLEIYLYDNQ 199
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L LY N++T L + L +L ++ NQ ++ Q L +I
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPSEEKERIQRLLPKCNI 286
Query: 182 S 182
S
Sbjct: 287 S 287
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ + + L L +SL+ NQ S
Sbjct: 241 LEENQLTMLPK-QIAALKQLARLSLKGNQFPS 271
>gi|24215562|ref|NP_713043.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. 56601]
gi|386074778|ref|YP_005989096.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24196709|gb|AAN50061.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458568|gb|AER03113.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 288
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E+N L+ LP +I L LY + N IT+L + L LQV +++ N++ + + E
Sbjct: 58 EENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPK-EIG 116
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
NL NL +S++ N++ ++ + L L LYLS NQL + L +I L++L+ + LS N
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQL-KILPQEIGNLRKLQRIHLSTN 175
Query: 234 KINKF 238
++ K
Sbjct: 176 ELTKL 180
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L I L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRIHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+I L LY N++T L + L +L ++ NQ ++ Q L
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPSEEKERIQRL 280
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ + + L L +SL+ NQ S
Sbjct: 241 LEENQLTMLPK-QIAALKQLARLSLKGNQFPS 271
>gi|410913015|ref|XP_003969984.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
G-protein coupled receptor 4-like [Takifugu rubripes]
Length = 977
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 5/214 (2%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSL-NNSLRGLTDLNWL 88
D +G L L L +NN+T + + ++ L + N + + +N+ L+ L L
Sbjct: 147 DSFEGLQQLRHLWLDDNNLTKVPVGSLRHQANLQALTLALNRIFYIPDNAFANLSSLVVL 206
Query: 89 FLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DG 146
L+NNR+K + + LS L+ L + N L A P +Q +L L ++N ITS+ +G
Sbjct: 207 HLHNNRIKEIGDNCFAGLSNLETLDLNFNSLTAFPRAVQALPKLKELGFHSNDITSIPEG 266
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
L+ ++ N + V FQNL L S+ L+ + L+ L L L
Sbjct: 267 AFHNNPLLRTIHLYDNPLAFVGASAFQNLSELHSLMLRGANMMQDFPILTWTNNLESLTL 326
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
S +++ D + LK LRT+DLSYNKI + T
Sbjct: 327 SGTKISSIPADLCKDLKLLRTLDLSYNKITEIPT 360
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFN 70
+ALN I P+ L+S L+ L L NN I I +N F + L + FN
Sbjct: 184 LALNRIFYIPDNAFANLSS--------LVVLHLHNNRIKEIGDNCFAGLSNLETLDLNFN 235
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLF 128
+LT+ +++ L L L ++N + S+ EG L+ + + N L + S Q
Sbjct: 236 SLTAFPRAVQALPKLKELGFHSNDITSIPEGAFHNNPLLRTIHLYDNPLAFVGASAFQNL 295
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
S+L SL + +L L+ + +I+ + D ++L L ++ L N+I
Sbjct: 296 SELHSLMLRGANMMQDFPILTWTNNLESLTLSGTKISSIPADLCKDLKLLRTLDLSYNKI 355
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
T + +L G +L + HN++ + D +GL LR +DLS N+I
Sbjct: 356 TEI-PTLQGCVRLQEINFQHNRIGQIDRDTFQGLSALRLLDLSRNEI 401
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 6/183 (3%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
++ P L L +N+IT I E AF P +R +H+ N L + S + L++L+ L L
Sbjct: 244 VQALPKLKELGFHSNDITSIPEGAFHNNPLLRTIHLYDNPLAFVGASAFQNLSELHSLML 303
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLR 149
+ L + L+ L + ++ ++P+D+ + L +L + N+IT + L+
Sbjct: 304 RGANMMQDFPILTWTNNLESLTLSGTKISSIPADLCKDLKLLRTLDLSYNKITEIP-TLQ 362
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSH 208
G +LQ N N+I + RD FQ L L + L N+I ++ + L+ L+ L LS
Sbjct: 363 GCVRLQEINFQHNRIGQIDRDTFQGLSALRLLDLSRNEIRVIHRDAFLSLSALSNLDLSA 422
Query: 209 NQL 211
N L
Sbjct: 423 NSL 425
Score = 44.7 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 25/116 (21%)
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM---------------- 191
L+ L LQ +D N I+ V D F+ L L + L +N +T +
Sbjct: 125 LKNLHSLQSLRLDANHISAVPDDSFEGLQQLRHLWLDDNNLTKVPVGSLRHQANLQALTL 184
Query: 192 ---------NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+++ + L+ L L+L +N++ E + GL L T+DL++N + F
Sbjct: 185 ALNRIFYIPDNAFANLSSLVVLHLHNNRIKEIGDNCFAGLSNLETLDLNFNSLTAF 240
>gi|383852914|ref|XP_003701970.1| PREDICTED: chaoptin-like [Megachile rotundata]
Length = 1318
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 100/178 (56%), Gaps = 7/178 (3%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+L+ L L NNNI I E + PP + L + N L S SL+ L DL WL+L N K+L
Sbjct: 267 SLVWLNLDNNNIEEISEESLPPNMHTLSLNSNLLKSFPQSLKMLKDLTWLYLRGNDFKNL 326
Query: 99 EGQLGTLSKLQLLVIEQNQLE----ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
E S L+L+ + +N +E ++P++ L ++ ++N++TSL + +
Sbjct: 327 ELPDFQSSNLELVDVSENCIEWIHTSIPNNRSL--KIKDFNLDSNKLTSLTAGMFDRLET 384
Query: 155 QVFNMDFNQITMVRRDEFQNLHN-LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ ++ N I + D F+ L N L+ ++L+NN + ++ S++ L KL+YLYL++N +
Sbjct: 385 KRIHLSSNSIKNIDEDAFRGLENVLEYLNLENNDLPNVPSAVGHLRKLSYLYLANNDI 442
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT-----IRKLHVGFNNLTSLNNSLRGLT 83
L + KG L L L N++T + ++ F I +L F +LR L+
Sbjct: 518 LKGETFKGASKLKELSLSFNHLTELDDDCFVGIEESLDILELSFAFATDVFPQRALRPLS 577
Query: 84 DLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNN 139
+L WL L+NN +++E + +L+ + +E N+L LP I L S +L + N
Sbjct: 578 NLLWLVLDNNNFQTIEATAFYSFQQLRYINLESNRLHYLPERIFLSSVHPELRDVKLGYN 637
Query: 140 RITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSG 197
+ ++ LT+L+ ++ N+I ++ D + L +ISL N+I M +L G
Sbjct: 638 FLEAIPEFSFHNLTELRSLDLTGNRIKLLGSDSIMDCPKLVTISLAYNRIVKMEKNALYG 697
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLR-TVDLSYNKIN 236
L L +L+L N+LT LD I + +++SYN I+
Sbjct: 698 LPSLRFLHLEFNKLTVLDLDAIAEIGGPDFALNVSYNAIS 737
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 27/211 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
L SD + P L+T+ L N I + +NA P++R LH+ FN LT L+ +++ +
Sbjct: 666 LGSDSIMDCPKLVTISLAYNRIVKMEKNALYGLPSLRFLHLEFNKLTVLDLDAIAEIGGP 725
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
++ + SL G+++ L L + N + LP+D + Y
Sbjct: 726 DFALNVSYNAISLINSGGSMNNLTRLDLSFNNISQLPAD--------TFY---------- 767
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 204
G L+ +++ N I ++ F L +L++++L++N++ S+ S GL L L
Sbjct: 768 ----GTPDLRSLDLESNFIVVLEPGTFA-LKHLETLNLRDNKVESLRKQSFHGLDSLQQL 822
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+S NQL++ + R LK LR ++LS NKI
Sbjct: 823 DMSGNQLSQLATEQFRNLKNLRILNLSGNKI 853
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 63 RKLHVGFNNLTSLN-NSLRGLTD-LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++H+ N++ +++ ++ RGL + L +L L NN L ++ +G L KL L + N +
Sbjct: 385 KRIHLSSNSIKNIDEDAFRGLENVLEYLNLENNDLPNVPSAVGHLRKLSYLYLANNDIRN 444
Query: 121 LPSD-IQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVF---NMDFNQITMVRRDEFQNL 175
+ + Q F++ +L A + SLD + + L++ Q N+ +N+I+ ++ +F+
Sbjct: 445 ISGEAFQEFAE--NLRALSLATNSLDAVPVAALSRCQRLLHLNLGYNKISHIQPGDFEWA 502
Query: 176 HNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR-LRTVDLSY 232
+L+ + L+NN +T + + G +KL L LS N LTE D G++ L ++LS+
Sbjct: 503 EDLEILLLRNNILTKLKGETFKGASKLKELSLSFNHLTELDDDCFVGIEESLDILELSF 561
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 33/244 (13%)
Query: 1 MSRFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAF-- 58
+RF + L+++ +G + +D L + + L L++N +++I + +F
Sbjct: 137 FARFPDVSVNYVAQLDVVG----SGLQAMDNDALASSVGVEALGLMSNRLSNIGDKSFSR 192
Query: 59 -PPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
++R L + +N L + N L LNWL +++N L +L+G G
Sbjct: 193 IADSLRSLDLSYNALEDVPFNVFHDLKKLNWLNMHSNHLTTLDGDWG------------- 239
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L + + +N I + + L N+D N I + +
Sbjct: 240 ---------HTRDTLTNAFFGDNSIIEIPKVFSTFESLVWLNLDNNNIEEISEESLP--P 288
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
N+ ++SL +N + S SL L L +LYL N L D + L VD+S N I
Sbjct: 289 NMHTLSLNSNLLKSFPQSLKMLKDLTWLYLRGNDFKNLELPDFQS-SNLELVDVSENCIE 347
Query: 237 KFGT 240
T
Sbjct: 348 WIHT 351
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 96/222 (43%), Gaps = 20/222 (9%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP---TIRKLHVGFNNLTSLNNSLRGLTDL 85
L D +GT L L L NN T + +F T+R L++ N + L+++ + L
Sbjct: 856 LPRDVFEGT-KLEILDLSNNKFTVVPSPSFLEVGYTLRDLNLADNFVDHLDSTAFPTSQL 914
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRITS 143
L L +NRL L + +L KL L + QN L+A L LY N +
Sbjct: 915 VSLNLAHNRLTILPDNSFVSLGKLLSLNVSQNVLQANFKELFHYLPGLRQLYLANCGLK- 973
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
D L LT L V ++ FN + +FQ + NL + L NN +TSM + L L
Sbjct: 974 -DIPLLPLTNLNVLDLSFNYVDSTSDKQFQYMKNLKILLLVNNSLTSMPN--VKLNLLRE 1030
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 245
L +S N + E + LSY ++ K RN K
Sbjct: 1031 LDVSGNPIEELTKESF----------LSYPRLEKLNLRNLNK 1062
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLK 96
L TL L +N + + + +F ++++L + N L+ L R L +L L L+ N+++
Sbjct: 795 LETLNLRDNKVESLRKQSFHGLDSLQQLDMSGNQLSQLATEQFRNLKNLRILNLSGNKIR 854
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
SL + +KL++L + N+ +PS +++ L L +N + LD ++L
Sbjct: 855 SLPRDVFEGTKLEILDLSNNKFTVVPSPSFLEVGYTLRDLNLADNFVDHLDSTAFPTSQL 914
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTE 213
N+ N++T++ + F +L L S+++ N + + L L LYL++ L +
Sbjct: 915 VSLNLAHNRLTILPDNSFVSLGKLLSLNVSQNVLQANFKELFHYLPGLRQLYLANCGLKD 974
Query: 214 FLLDDIRGLKRLRTVDLSYNKIN 236
L L L +DLS+N ++
Sbjct: 975 IPL---LPLTNLNVLDLSFNYVD 994
>gi|24216021|ref|NP_713502.1| hypothetical protein LA_3322 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075102|ref|YP_005989421.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
gi|24197249|gb|AAN50520.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
56601]
gi|353458893|gb|AER03438.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
Length = 284
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N LT L + L +L L L NN+LK+L ++G L LQ + +++N+L L
Sbjct: 119 LKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKEIGQLQNLQKMNLDKNRLNTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L SLY N N++T L + L L+ +++NQ+TM+ + E L NL+ +
Sbjct: 179 PNEIGQLQNLESLYLNYNQLTILPKEIGQLQNLESLYLNYNQLTMLPQ-EIGQLQNLEGL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L+ NQ+T++ + L L LYL +NQ + + I+ L
Sbjct: 238 YLKYNQLTTLPKEIGRLQNLKRLYLKYNQFSSKEKEKIQKL 278
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 11/216 (5%)
Query: 27 HPLTSDDLKGTPALITLLLVNN-NITHIHENAFPPTI------RKLHVGFNNLTSLNNSL 79
P+T DL T AL L V N++ FP I ++LH+ N T+L +
Sbjct: 33 EPVTYRDL--TKALQNPLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEI 90
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
L +L L L +N+LK+L ++G L L+ L + NQL LP +I L L NN
Sbjct: 91 EQLQNLKSLDLWDNQLKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNN 150
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
++ +L + L LQ N+D N++ + +E L NL+S+ L NQ+T + + L
Sbjct: 151 QLKTLPKEIGQLQNLQKMNLDKNRLNTL-PNEIGQLQNLESLYLNYNQLTILPKEIGQLQ 209
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LYL++NQLT L +I L+ L + L YN++
Sbjct: 210 NLESLYLNYNQLT-MLPQEIGQLQNLEGLYLKYNQL 244
>gi|417763688|ref|ZP_12411665.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417773732|ref|ZP_12421607.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418674971|ref|ZP_13236266.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409940507|gb|EKN86147.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410576203|gb|EKQ39210.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410578033|gb|EKQ45899.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 288
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L I L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRIHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTD---LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
KL + T L + + D LN+ N LK+L ++G L L+ L + N++
Sbjct: 28 KLPLKPGEYTDLEEAFKNPKDVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITT 87
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L L N NR+ ++ + L L+ ++++N++ + + E NL NL
Sbjct: 88 LPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPK-EIGNLKNLKE 146
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L NQ+ + + L KL ++LS N+LT+ L +I+ L+ L + L N+
Sbjct: 147 LYLSRNQLKILPQEIGNLRKLQRIHLSTNELTK-LPQEIKNLESLLEIYLYDNQ 199
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+I L LY N++T L + L +L ++ NQ ++ Q L
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPEQIAALKQLARLSLKGNQFPSEEKERIQRL 280
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ ++ L L +SL+ NQ S
Sbjct: 241 LEENQLTML-PEQIAALKQLARLSLKGNQFPS 271
>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
Fusaro]
gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
Length = 863
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 49 NITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
+I++ + PP I KL ++ N LTSL + L +L L ++ N+L SL +
Sbjct: 68 DISYNQLTSLPPDISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSGI 127
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
L L L I +NQL +LP +I L L + N++TSL + L L N+ N
Sbjct: 128 TELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPPEILELKSLTQINIYEN 187
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
Q+T + E L +L +S+ NQ+TS+ S ++ L L L +S NQLT L +I L
Sbjct: 188 QLTSLPH-EISELKSLTQLSISGNQLTSLPSEIANLESLTQLDISRNQLTSLPL-EITEL 245
Query: 223 KRLRTVDLSYNKI 235
K L +D+S NK+
Sbjct: 246 KNLTQLDISSNKL 258
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L + + NLTSL + L + L+++ N+L SL ++ L L+ L I NQL +L
Sbjct: 18 VTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSL 77
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI L L NN++TSL + L L+ ++ NQ+T + L +L +
Sbjct: 78 PPDISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSG-ITELKDLTQL 136
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ NQ+TS+ +S L L L +S NQLT L +I LK L +++ N++
Sbjct: 137 SISKNQLTSLPPEISKLKNLKQLSISRNQLTS-LPPEILELKSLTQINIYENQL 189
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ PP I +L ++ N LTSL + + L L L ++ N+L SL ++ L L
Sbjct: 168 SLPPEILELKSLTQINIYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIANLESLTQ 227
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L I +NQL +LP +I L L ++N++TSL
Sbjct: 228 LDISRNQLTSLPLEITELKNLTQLDISSNKLTSL 261
>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 429
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 234 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 293
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L LQ +D NQ+T + + E + L NL +
Sbjct: 294 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPK-EIEQLQNLRVL 352
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L L L L NQLT F +IR LK L+ + L N +
Sbjct: 353 DLDNNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQELHLYLNPL 405
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L L L NR+ +L ++G L LQ L + QNQL L
Sbjct: 257 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL 316
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L L+V ++D NQ+T + + E L NL +
Sbjct: 317 PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK-EIGQLQNLQEL 375
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NQ+T+ + L L L+L N L+ IR L
Sbjct: 376 CLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIRRL 416
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L + QL L
Sbjct: 188 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L L++ + N+IT + + E L NL +
Sbjct: 248 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPK-EIGQLQNLQRL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L NQLT L +I L+ LR +DL N++
Sbjct: 307 DLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKEIEQLQNLRVLDLDNNQL 359
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L ++ L +L L L +N+L +L ++G L LQ L + N L
Sbjct: 47 PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP ++ L L N+ ++T+L + L LQ ++ FN +T + + E L NL
Sbjct: 107 TTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPK-EVGQLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++ ++ + L L L L+ N+LT L +IR L+ L+ +DL N++
Sbjct: 166 QRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLT-TLPKEIRQLRNLQELDLHRNQL 221
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ LT+L + L +L L L+ N L +L ++G L LQ L + QN+L L
Sbjct: 119 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++T+L +R L LQ ++ NQ+T + + E L NL ++
Sbjct: 179 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK-EIGQLQNLKTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 238 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 290
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++ L L+LL + NQL ALP +I L L
Sbjct: 40 LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ N +T+L + L LQ N++ ++T + + E L NL + L N +T++
Sbjct: 100 DLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPK-EIGQLRNLQELDLSFNSLTTLPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L N+L + +I LK L+ +DL+ NK+
Sbjct: 159 VGQLENLQRLDLHQNRLATLPM-EIGQLKNLQELDLNSNKL 198
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 43 LLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L+L N IT A P I ++L + N LT+L + L +L L L+ N+L
Sbjct: 283 LVLRENRIT-----ALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 337
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+L ++ L L++L ++ NQL LP +I L L + N++T+ +R L LQ
Sbjct: 338 TLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQE 397
Query: 157 FNMDFNQITMVRRDEFQNL 175
++ N ++ + + L
Sbjct: 398 LHLYLNPLSSKEKKRIRRL 416
>gi|340375357|ref|XP_003386202.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Amphimedon
queenslandica]
Length = 635
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTD 84
++LK +L L L +N + + PP + + L++ FN + S+N ++ L +
Sbjct: 215 PNELKQCVSLSVLDLRHNKLREV-----PPVVCELASLQTLYLRFNKIVSVNPAIGNLRN 269
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L L N+++ L +G+L++L L + N LE+LP +I SQL L +N +T L
Sbjct: 270 LTSLILRENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQLQHNDLTEL 329
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG-LTKLAY 203
+ L L+ + +NQ++ + + L+ I L++N +TS+ L G +TK++
Sbjct: 330 PVAIGNLKSLKRLGLQYNQLSEL-PPSLCSCTELNEIGLESNTLTSLPDQLFGSVTKMSN 388
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ LS N T F + D L + ++ + +N I K
Sbjct: 389 IQLSRNSFTSFPISDPSHLVSVNSLMIEHNHITKV 423
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + +++ L +++ ++ + L+L NR+ +L ++G L KL+ L + +N L LP++
Sbjct: 158 LDLSKSDIAVLPGNIKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLPNE 217
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
++ L L +N++ + ++ L LQ + FN+I V NL NL S+ L+
Sbjct: 218 LKQCVSLSVLDLRHNKLREVPPVVCELASLQTLYLRFNKIVSV-NPAIGNLRNLTSLILR 276
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N+I + S++ LT+L L +SHN L E L D+I +L + L +N + +
Sbjct: 277 ENKIRDLPSTIGSLTRLTALDVSHNHL-ESLPDEIANCSQLSFLQLQHNDLTEL 329
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ PP + RKL + N LT L N L+ L+ L L +N+L+ + + L+ LQ
Sbjct: 189 STLPPEVGNLKKLRKLALNENMLTDLPNELKQCVSLSVLDLRHNKLREVPPVVCELASLQ 248
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + N++ ++ I L SL N+I L + LT+L ++ N + +
Sbjct: 249 TLYLRFNKIVSVNPAIGNLRNLTSLILRENKIRDLPSTIGSLTRLTALDVSHNHLESL-P 307
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
DE N L + LQ+N +T + ++ L L L L +NQL+E
Sbjct: 308 DEIANCSQLSFLQLQHNDLTELPVAIGNLKSLKRLGLQYNQLSEL 352
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 11/189 (5%)
Query: 53 IHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLV 112
I E +F I +L++ N +++L + L L L LN N L L +L L +L
Sbjct: 172 IKEVSF---IEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLPNELKQCVSLSVLD 228
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-- 170
+ N+L +P + + L +LY N+I S++ + L L + N+I RD
Sbjct: 229 LRHNKLREVPPVVCELASLQTLYLRFNKIVSVNPAIGNLRNLTSLILRENKI----RDLP 284
Query: 171 -EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+L L ++ + +N + S+ ++ ++L++L L HN LTE + I LK L+ +
Sbjct: 285 STIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQLQHNDLTELPV-AIGNLKSLKRLG 343
Query: 230 LSYNKINKF 238
L YN++++
Sbjct: 344 LQYNQLSEL 352
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 26/196 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N+L SL + + + L++L L +N L L +G L L+ L ++ NQL LP
Sbjct: 296 LDVSHNHLESLPDEIANCSQLSFLQLQHNDLTELPVAIGNLKSLKRLGLQYNQLSELPPS 355
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNM------------------------ 159
+ ++L + +N +TSL D L +TK+ +
Sbjct: 356 LCSCTELNEIGLESNTLTSLPDQLFGSVTKMSNIQLSRNSFTSFPISDPSHLVSVNSLMI 415
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N IT V F L +SL++NQIT++ L L L NQL+ + ++I
Sbjct: 416 EHNHITKVPLGIFSQATELTQLSLRDNQITTLPLDFGTWVTLTELNLGTNQLSS-IPEEI 474
Query: 220 RGLKRLRTVDLSYNKI 235
+ L RL + L+ N I
Sbjct: 475 QELTRLEILVLANNTI 490
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 42 TLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE 99
+L++ +N+IT + F + +L + N +T+L L L L N+L S+
Sbjct: 412 SLMIEHNHITKVPLGIFSQATELTQLSLRDNQITTLPLDFGTWVTLTELNLGTNQLSSIP 471
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
++ L++L++LV+ N + LP I L L N++ L + L +L N+
Sbjct: 472 EEIQELTRLEILVLANNTIRTLPKGISALRNLKELDLEGNKLEYLATEISYLRELTKLNV 531
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
N+IT + R L NL +S N + + + + L L LYL+ N +FL ++
Sbjct: 532 QSNRITNLPRG-LGLLVNLKHLSAGENNLLEIPAEIGTLENLEELYLNDNPNLQFLPYEL 590
Query: 220 RGLKRL 225
KRL
Sbjct: 591 ALCKRL 596
>gi|126656423|ref|ZP_01727684.1| hypothetical protein CY0110_22007 [Cyanothece sp. CCY0110]
gi|126622109|gb|EAZ92816.1| hypothetical protein CY0110_22007 [Cyanothece sp. CCY0110]
Length = 830
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Query: 52 HIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
+ E A + L + F LTSL + LT+L L + N+L +L ++G L L L
Sbjct: 8 QVIEKAAKDKRKSLSLSFKKLTSLPPEIGKLTNLTSLSVLGNQLTNLPSEIGNLYNLTSL 67
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E+NQL LPS+I ++L Y N++T+L + L L ++ NQ+T + E
Sbjct: 68 YLEKNQLTNLPSEIGNLTKLNIFYLEKNQLTNLPSEIGNLYNLTSLHLSGNQLTNL-PPE 126
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
NL++L S+ L+NNQ+T++ + L KL LYLS NQLT
Sbjct: 127 IGNLYDLTSLYLENNQLTNLPREIGKLHKLTSLYLSGNQLT 167
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ PP I KL V N LT+L + + L +L L+L N+L +L ++G L+KL +
Sbjct: 30 SLPPEIGKLTNLTSLSVLGNQLTNLPSEIGNLYNLTSLYLEKNQLTNLPSEIGNLTKLNI 89
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
+E+NQL LPS+I L SL+ + N++T+L + L L ++ NQ+T + R
Sbjct: 90 FYLEKNQLTNLPSEIGNLYNLTSLHLSGNQLTNLPPEIGNLYDLTSLYLENNQLTNLPR- 148
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
E LH L S+ L NQ+T++ + L L L + +NQ+T
Sbjct: 149 EIGKLHKLTSLYLSGNQLTNLPPEIGNLDNLISLVIRNNQIT 190
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LT+L + + LT LN +L N+L +L ++G L L L + NQL LP +
Sbjct: 67 LYLEKNQLTNLPSEIGNLTKLNIFYLEKNQLTNLPSEIGNLYNLTSLHLSGNQLTNLPPE 126
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L SLY NN++T+L + L KL + NQ+T + E NL NL S+ ++
Sbjct: 127 IGNLYDLTSLYLENNQLTNLPREIGKLHKLTSLYLSGNQLTNLP-PEIGNLDNLISLVIR 185
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
NNQIT++ + A + QL +
Sbjct: 186 NNQITNLPPEIERKKTRAIINFYKQQLEQ 214
>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
bingchenggensis BCW-1]
gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
bingchenggensis BCW-1]
Length = 370
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 7/202 (3%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLH---VGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L L +N +T + E F ++KL VG N ++++ +SL L L+ L L+ NRL
Sbjct: 126 LTDLALRDNKLTELPE--FLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLV 183
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+ LG L+ L L ++ N+L LP+ + + L L +NR+T L L GLT L+
Sbjct: 184 EIPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAELSGLTALRW 243
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
N+D N++T + L I+L N++T++ +L GLT L L L N+LTE L
Sbjct: 244 LNLDRNELTEL-PPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLTE-LP 301
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+ GL L ++DL N++
Sbjct: 302 ASMAGLTALTSLDLGDNELTDL 323
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ +L + N L + +L LT L L L+ NRL L LG L+ L L++ N+L
Sbjct: 171 ALSELDLSGNRLVEIPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTR 230
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+++ + L L + N +T L G T L N+ FN++T + + L L S
Sbjct: 231 LPAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALP-ETLGGLTALTS 289
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--LLDDIRGLKRLR 226
+SL+ N++T + +S++GLT L L L N+LT+ + D+ L LR
Sbjct: 290 LSLRGNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLR 337
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ +L + T + + L LT L L L++NRL+ L LG LS L V+ N+L
Sbjct: 56 ALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLAQ 115
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P ++ ++L L +N++T L L GL KL ++ N+I+ V +L L
Sbjct: 116 IPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPS-SLGDLAALSE 174
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ L N++ + +L LT L L L N+L E
Sbjct: 175 LDLSGNRLVEIPRTLGKLTALTELNLDFNRLAEL 208
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
L +G +L + L T L L L++ + LG L+ L L + N+LE LP
Sbjct: 36 SLELGHLSLPVVPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPE 95
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF-QNLHNLDSIS 182
+ S L N NR+ + +R LT+L + N++T + EF L L S+
Sbjct: 96 SLGNLSALTEFVLNGNRLAQIPIWVRQLTELTDLALRDNKLTEL--PEFLGGLKKLASLD 153
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ +N+I+++ SSL L L+ L LS N+L E + + L L ++L +N++ +
Sbjct: 154 VGSNRISAVPSSLGDLAALSELDLSGNRLVE-IPRTLGKLTALTELNLDFNRLAEL 208
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPP------TIRKLHVGFNNLTSLNNSLRGLTDLN 86
+L G AL L L N +T + PP + +++GFN LT+L +L GLT L
Sbjct: 234 ELSGLTALRWLNLDRNELTEL-----PPWAGGFTALTGINLGFNRLTALPETLGGLTALT 288
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L L NRL L + L+ L L + N+L LP+ + L SL + NR +
Sbjct: 289 SLSLRGNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFS 344
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
LLL +N +T + E + +R L++ N LT L G T L + L NRL +L
Sbjct: 221 LLLGSNRLTRLPAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPET 280
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
LG L+ L L + N+L LP+ + + L SL +N +T L + L L +D
Sbjct: 281 LGGLTALTSLSLRGNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDG 340
Query: 162 NQITMVRR 169
N+ + R
Sbjct: 341 NRFSHAPR 348
>gi|260832382|ref|XP_002611136.1| hypothetical protein BRAFLDRAFT_88465 [Branchiostoma floridae]
gi|229296507|gb|EEN67146.1| hypothetical protein BRAFLDRAFT_88465 [Branchiostoma floridae]
Length = 696
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 10/204 (4%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGF--NNLTSLN-NSLRGLTDLNWLFLNNNR 94
P L+ L L NN IT I E AF R +G N +T + + L +L+WL L++N+
Sbjct: 157 PGLLELWLSNNQITMIQEGAFVNLTRLQMLGLFSNQITMIQAGTFVNLPELHWLVLSSNQ 216
Query: 95 LKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLT 152
+ + EG L++LQ L ++ NQ+ + + QL L NNN+IT + +G LT
Sbjct: 217 ITMIQEGSFINLTRLQKLSLDNNQITIIAN----LPQLRDLQLNNNQITMIQEGSFANLT 272
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQL 211
+LQ + NQITM+ F NL L + L N IT + L + +L LYL NQ+
Sbjct: 273 RLQDLYLFANQITMIHASTFANLSRLRLLYLCFNNITMIQEGLFANQPQLQELYLDSNQI 332
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
T L RL+ ++L+ N+I
Sbjct: 333 TMIHASTFANLPRLQKLNLATNQI 356
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLK 96
L L L +N I+ I F P ++ LH+ N +T + S L L L+L+NN++
Sbjct: 111 LQVLDLSSNQISMIQAGTFVNLPKLQDLHLSNNQITMIQEGSFVNLPGLLELWLSNNQIT 170
Query: 97 SL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLRGLTK 153
+ EG L++LQ+L + NQ+ + + + +L L ++N+IT + +G LT+
Sbjct: 171 MIQEGAFVNLTRLQMLGLFSNQITMIQAGTFVNLPELHWLVLSSNQITMIQEGSFINLTR 230
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLT 212
LQ ++D NQIT++ NL L + L NNQIT + S + LT+L LYL NQ+T
Sbjct: 231 LQKLSLDNNQITIIA-----NLPQLRDLQLNNNQITMIQEGSFANLTRLQDLYLFANQIT 285
Query: 213 EFLLDDIRGLKRLRTVDLSYNKI 235
L RLR + L +N I
Sbjct: 286 MIHASTFANLSRLRLLYLCFNNI 308
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 13/206 (6%)
Query: 38 PALITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNN 93
P+ IT L L +N IT I + AF P ++KL + N +T L +L LT L L L++N
Sbjct: 60 PSSITDLNLAHNKITIIQKGAFVNLPQLQKLSLHKNQITMLQEGALLNLTRLQVLDLSSN 119
Query: 94 RLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLRG 150
++ ++ G L KLQ L + NQ+ + + L L+ +NN+IT + +G
Sbjct: 120 QISMIQAGTFVNLPKLQDLHLSNNQITMIQEGSFVNLPGLLELWLSNNQITMIQEGAFVN 179
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHN 209
LT+LQ+ + NQITM++ F NL L + L +NQIT + S LT+L L L +N
Sbjct: 180 LTRLQMLGLFSNQITMIQAGTFVNLPELHWLVLSSNQITMIQEGSFINLTRLQKLSLDNN 239
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKI 235
Q+T I L +LR + L+ N+I
Sbjct: 240 QIT-----IIANLPQLRDLQLNNNQI 260
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
P L L+L +N IT I E +F R KL + N +T + N L L L LNNN++
Sbjct: 205 PELHWLVLSSNQITMIQEGSFINLTRLQKLSLDNNQITIIAN----LPQLRDLQLNNNQI 260
Query: 96 KSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGLLRGLT 152
+ EG L++LQ L + NQ+ + S S+L LY N IT + +GL
Sbjct: 261 TMIQEGSFANLTRLQDLYLFANQITMIHASTFANLSRLRLLYLCFNNITMIQEGLFANQP 320
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+LQ +D NQITM+ F NL L ++L NQIT
Sbjct: 321 QLQELYLDSNQITMIHASTFANLPRLQKLNLATNQIT 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 83 TDLNWLFLNNNRLKSLEGQLG--TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
D N+LFL + L +L + L+ ++ +I++ LP QL L + N+
Sbjct: 45 CDCNFLFLTSIPL-NLPSSITDLNLAHNKITIIQKGAFVNLP-------QLQKLSLHKNQ 96
Query: 141 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGL 198
IT L +G L LT+LQV ++ NQI+M++ F NL L + L NNQIT + S L
Sbjct: 97 ITMLQEGALLNLTRLQVLDLSSNQISMIQAGTFVNLPKLQDLHLSNNQITMIQEGSFVNL 156
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L+LS+NQ+T L RL+ + L N+I
Sbjct: 157 PGLLELWLSNNQITMIQEGAFVNLTRLQMLGLFSNQI 193
>gi|443478834|ref|ZP_21068534.1| leucine-rich repeat-containing protein [Pseudanabaena biceps PCC
7429]
gi|443015827|gb|ELS30633.1| leucine-rich repeat-containing protein [Pseudanabaena biceps PCC
7429]
Length = 250
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 8/174 (4%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LTSL +++ L L WL+L +N L ++ + L L +L + +N++ LP +
Sbjct: 44 LYLSENELTSLPDAIANLRQLTWLYLESNHLSTIPNAVLYLKNLTVLNLAENRITQLPPN 103
Query: 125 IQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+ SQL NNN + SL G L+ LT L V + + + E L+NL +
Sbjct: 104 LGKLSQLARFSLNNNCLKSLPAEIGSLKFLTWLDVSENELESLPL----EIAYLNNLIEL 159
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ N +T++ S +S LT L LYL HN+LT + I L+ + +DLSYN++
Sbjct: 160 DLRKNNLTTLPSEISYLTNLTDLYLGHNKLT-CIPPAIGKLENITELDLSYNQL 212
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N +T L +L L+ L LNNN LKSL ++G+L L L + +N+LE+LP +
Sbjct: 90 LNLAENRITQLPPNLGKLSQLARFSLNNNCLKSLPAEIGSLKFLTWLDVSENELESLPLE 149
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L L N +T+L + LT L + N++T + L N+ + L
Sbjct: 150 IAYLNNLIELDLRKNNLTTLPSEISYLTNLTDLYLGHNKLTCI-PPAIGKLENITELDLS 208
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQ+TS+ + L KL L L N + L D++
Sbjct: 209 YNQLTSLPPEIMNLKKLERLDLRGNAIDVSSLSDLK 244
>gi|390347474|ref|XP_798409.3| PREDICTED: leucine-rich repeat protein SHOC-2-like
[Strongylocentrotus purpuratus]
Length = 550
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R+L + ++T L +SL+ LT L L+L NRL SL ++G L L+ L + +N L LP
Sbjct: 64 RRLDLSKMSITILPSSLKDLTQLVELYLYGNRLVSLPSEIGCLCNLERLALNENSLTTLP 123
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+++ L L +N++ + ++ L L + FN+IT V D NL L +S
Sbjct: 124 EELEKLGLLKVLDLRHNKLKEIPEVVYKLLSLTTLFLRFNRITQVGED-IHNLTKLTMLS 182
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ N+I ++ + LT L +SHN L E L ++I +L ++DL +N++
Sbjct: 183 LRENKIKALPRGVGKLTLLTTFDVSHNHL-EHLPEEIGNCTQLSSLDLQHNEL 234
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++G N ++ L + LT L L L+NN L+ L ++G LS+L+ L +E+N+LEA
Sbjct: 364 SMVELNLGTNQISKLPEDIEHLTSLEVLILSNNLLRRLPTRIGNLSRLRELDLEENRLEA 423
Query: 121 LPSDIQLFSQLGSLYANNNRITSL 144
LPS++ +L L N++T L
Sbjct: 424 LPSELAYLKELQKLSVQTNQLTQL 447
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL++ N LT+L + T + L L N++ L + L+ L++L++ N L LP+
Sbjct: 344 KLNMKDNQLTALPLDVNSWTSMVELNLGTNQISKLPEDIEHLTSLEVLILSNNLLRRLPT 403
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I S+L L NR+ +L L L +LQ ++ NQ+T + R L NL +
Sbjct: 404 RIGNLSRLRELDLEENRLEALPSELAYLKELQKLSVQTNQLTQLPRS-IGRLSNLVYLKA 462
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHN 209
N + S+ + L +L LY++ N
Sbjct: 463 GENNLASLPEEIGSLEQLQQLYINDN 488
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
+ +L + +N LT + SL +L + N + L EG L +L+KL + + +N
Sbjct: 246 CLSRLGLRYNRLTGIPKSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICLSRNNFT 305
Query: 120 ALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
A P Q F+ + ++ ++N+I + G+ L NM NQ+T + D + +
Sbjct: 306 AYPVGGPQQFATVDTINMDHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLD-VNSWTS 364
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ ++L NQI+ + + LT L L LS+N L L I L RLR +DL N++
Sbjct: 365 MVELNLGTNQISKLPEDIEHLTSLEVLILSNN-LLRRLPTRIGNLSRLRELDLEENRLEA 423
Query: 238 FGTR 241
+
Sbjct: 424 LPSE 427
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 9/206 (4%)
Query: 44 LLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
LL +++H H P I L + N L L + L L+ L L NRL
Sbjct: 200 LLTTFDVSHNHLEHLPEEIGNCTQLSSLDLQHNELLDLPETTGNLKCLSRLGLRYNRLTG 259
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLD-GLLRGLTKLQ 155
+ L L+ +E N + LP + ++L S+ + N T+ G + +
Sbjct: 260 IPKSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICLSRNNFTAYPVGGPQQFATVD 319
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
NMD NQI + F L +++++NQ+T++ ++ T + L L NQ+++ L
Sbjct: 320 TINMDHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLDVNSWTSMVELNLGTNQISK-L 378
Query: 216 LDDIRGLKRLRTVDLSYNKINKFGTR 241
+DI L L + LS N + + TR
Sbjct: 379 PEDIEHLTSLEVLILSNNLLRRLPTR 404
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 28/176 (15%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + FN +T + + LT L L L N++K+L +G L+ L + N LE LP +
Sbjct: 158 LFLRFNRITQVGEDIHNLTKLTMLSLRENKIKALPRGVGKLTLLTTFDVSHNHLEHLPEE 217
Query: 125 IQLFSQLGSLYANNN-----------------------RITSLDGLLRGLTKLQVFNMDF 161
I +QL SL +N R+T + L L+ FN++
Sbjct: 218 IGNCTQLSSLDLQHNELLDLPETTGNLKCLSRLGLRYNRLTGIPKSLSNCVNLEEFNVEG 277
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA---YLYLSHNQLTEF 214
N I ++ +L+ L SI L N T+ + G + A + + HNQ+ +
Sbjct: 278 NNIGILPEGLLCSLNKLTSICLSRNNFTAY--PVGGPQQFATVDTINMDHNQINKI 331
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
LT LN + +N+L +L + + + + L + NQ+ LP DI+ + L L +NN +
Sbjct: 342 LTKLN---MKDNQLTALPLDVNSWTSMVELNLGTNQISKLPEDIEHLTSLEVLILSNNLL 398
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L++L+ +++ N++ + E L L +S+Q NQ+T + S+ L+ L
Sbjct: 399 RRLPTRIGNLSRLRELDLEENRLEALP-SELAYLKELQKLSVQTNQLTQLPRSIGRLSNL 457
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLR 226
YL N L L ++I L++L+
Sbjct: 458 VYLKAGENNLAS-LPEEIGSLEQLQ 481
>gi|170041263|ref|XP_001848389.1| SAPS287 [Culex quinquefasciatus]
gi|167864863|gb|EDS28246.1| SAPS287 [Culex quinquefasciatus]
Length = 1000
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 7/207 (3%)
Query: 40 LITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLK 96
L+ LLL NN I + +A P T+R L + NN+ + S L +L LN N+L
Sbjct: 4 LVRLLLANNGIEALEVDALTPLTTLRFLDLSRNNIKEIGFGSFPAKNSLQYLNLNFNKLT 63
Query: 97 SL-EGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSL-DGLLRGLTK 153
+L +G L L+ L I N LE + S Q +QL SL NNN+ITSL DG+ GLT
Sbjct: 64 ALTKGTFQRLPLLKRLEINSNLLEEVQSLTFQNLNQLKSLKMNNNKITSLMDGVFHGLTT 123
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT-KLAYLYLSHNQLT 212
+ + ++ N IT +R+ NL +L S++L N IT + + +L L LS N+L
Sbjct: 124 ISMLELNNNSITSIRKGGLFNLTSLTSLALSKNAITEIEQDGWEFSPRLVTLDLSFNRLE 183
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINKFG 239
L +LR ++L N+I+ G
Sbjct: 184 SIDKYTFEELSQLRALNLEGNQISAVG 210
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 62 IRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ L + N +TSL + GLT ++ L LNNN + S+ +G L L+ L L + +N +
Sbjct: 100 LKSLKMNNNKITSLMDGVFHGLTTISMLELNNNSITSIRKGGLFNLTSLTSLALSKNAIT 159
Query: 120 ALPSDIQLFS-QLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+ D FS +L +L + NR+ S+D L++L+ N++ NQI+ V F N N
Sbjct: 160 EIEQDGWEFSPRLVTLDLSFNRLESIDKYTFEELSQLRALNLEGNQISAVGEGTFNNTKN 219
Query: 178 LDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L+ ++L N+I+ M GL+KL L+L+ N++ + GLK L ++LS N
Sbjct: 220 LEVLNLGQNKISWTIEDMKGPFFGLSKLEKLFLNANEVKSVSRNAFIGLKSLTLLELSQN 279
Query: 234 KIN 236
I+
Sbjct: 280 NIS 282
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 39 ALITLLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRL 95
+L +L L N IT I ++ F P + L + FN L S++ + L+ L L L N++
Sbjct: 147 SLTSLALSKNAITEIEQDGWEFSPRLVTLDLSFNRLESIDKYTFEELSQLRALNLEGNQI 206
Query: 96 KSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
++ EG L++L + QN++ D++ G GL+KL
Sbjct: 207 SAVGEGTFNNTKNLEVLNLGQNKISWTIEDMK-------------------GPFFGLSKL 247
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
+ ++ N++ V R+ F L +L + L N I+S+
Sbjct: 248 EKLFLNANEVKSVSRNAFIGLKSLTLLELSQNNISSI 284
>gi|427736832|ref|YP_007056376.1| hypothetical protein Riv7116_3370 [Rivularia sp. PCC 7116]
gi|427371873|gb|AFY55829.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
Length = 421
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 45 LVNNNITHIHEN---AFPP------TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
L N + I EN + PP +++L++ N L+ L S L +L L+L +N+
Sbjct: 200 LANLELLEIGENQLTSLPPELGKLSKLKQLNLSVNQLSDLPLSQAKLINLKTLYLCSNQF 259
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
L ++ L+ L+ L + QNQL L +I S L L + N++ SL + LT L+
Sbjct: 260 TKLPAEISRLTNLKSLYVIQNQLNNLTPEIGQLSNLELLDISENKLNSLPTEIEKLTSLR 319
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
F ++ N ++ + + E +L NL +++LQ NQ+T++ + + L L YL+LS N+++
Sbjct: 320 YFILNVNHLSNLPK-EIGHLTNLVTLNLQENQLTTLPTEIEKLMNLEYLFLSENKISNLP 378
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
+ +I+ L +L+ +DLS N I
Sbjct: 379 I-EIKQLTKLKHLDLSKNPI 397
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 25/182 (13%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT L L +L + L NN+L +L ++G L+ L+LL I +NQL +L
Sbjct: 157 LKELDLLENELTYLPEEFGKLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTSL 216
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + L L+KL+ N+ NQ++ + + + L NL ++
Sbjct: 217 PPE-----------------------LGKLSKLKQLNLSVNQLSDLPLSQAK-LINLKTL 252
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +NQ T + + +S LT L LY+ NQL L +I L L +D+S NK+N T
Sbjct: 253 YLCSNQFTKLPAEISRLTNLKSLYVIQNQLNN-LTPEIGQLSNLELLDISENKLNSLPTE 311
Query: 242 NE 243
E
Sbjct: 312 IE 313
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 25/199 (12%)
Query: 60 PTIRKLHVGFNNLTSL----------------NNSLRG-------LTDLNWLFLNNNRLK 96
P + L++G N+LT L NN ++ LT+L L L++N L
Sbjct: 40 PNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNNLIKSFPLGIAKLTNLKVLSLDDNYLN 99
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+L ++G L+ L+ L + NQL LP + +L L N++TSL L+KL+
Sbjct: 100 NLPEEIGNLNNLEYLDLSNNQLNQLPPEFGKLIKLQELCLEGNQLTSLPCEFGQLSKLKE 159
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
++ N++T + +EF L NL + L NN++ ++ + L L L + NQLT L
Sbjct: 160 LDLLENELTYL-PEEFGKLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTS-LP 217
Query: 217 DDIRGLKRLRTVDLSYNKI 235
++ L +L+ ++LS N++
Sbjct: 218 PELGKLSKLKQLNLSVNQL 236
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L SL + LT L + LN N L +L ++G L+ L L +++NQL LP++
Sbjct: 298 LDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGHLTNLVTLNLQENQLTTLPTE 357
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
I+ L L+ + N+I++L ++ LTKL+ ++ N I++
Sbjct: 358 IEKLMNLEYLFLSENKISNLPIEIKQLTKLKHLDLSKNPISI 399
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L ++ L +L +L+L NN L L ++ L KL+LL + N +++ P I + L L
Sbjct: 32 LPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNNLIKSFPLGIAKLTNLKVL 91
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
++N + +L + L L+ ++ NQ+ + EF L L + L+ NQ+TS+
Sbjct: 92 SLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQL-PPEFGKLIKLQELCLEGNQLTSLPCE 150
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+KL L L N+LT +L ++ L L+ VDL NK+
Sbjct: 151 FGQLSKLKELDLLENELT-YLPEEFGKLINLQKVDLGNNKL 190
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
GLT LN L+ L L ++ L L+ L + N L LP +I+ +L L +NN
Sbjct: 17 EGLTTLN---LSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNN 73
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
I S + LT L+V ++D N + + +E NL+NL+ + L NNQ+ + L
Sbjct: 74 LIKSFPLGIAKLTNLKVLSLDDNYLNNL-PEEIGNLNNLEYLDLSNNQLNQLPPEFGKLI 132
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
KL L L NQLT L + L +L+ +DL N++
Sbjct: 133 KLQELCLEGNQLTS-LPCEFGQLSKLKELDLLENEL 167
>gi|220907470|ref|YP_002482781.1| hypothetical protein Cyan7425_2057 [Cyanothece sp. PCC 7425]
gi|219864081|gb|ACL44420.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
Length = 482
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 98/177 (55%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RK+ + N LT L S+ LT L WL L+ N+LK L +G+L++L L + NQL L
Sbjct: 264 LRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTEL 323
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I + L SL ++N++T + + LT+L+ N+ NQ+T + L L++
Sbjct: 324 PTAICSLTDLESLRLSDNQLTEIPESISDLTELEWLNLSRNQLTELPA-AIGLLTELETF 382
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQ+T + S+ L +L +++L NQL + L + L +LR + L N++ +
Sbjct: 383 YLSENQLTELPESIGALIQLDWIFLDDNQLIK-LPESFSSLIQLRRLYLENNQLTEL 438
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Query: 43 LLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L NN + N+ P +I ++L V N L++L S+ L L + L++N+L
Sbjct: 221 LCLCNNQL-----NSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLT 275
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
L +G+L++L L + NQL+ LP I +QL L +NN++T L + LT L+
Sbjct: 276 YLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLES 335
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ NQ+T + + +L L+ ++L NQ+T + +++ LT+L YLS NQLTE L
Sbjct: 336 LRLSDNQLTEI-PESISDLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQLTE-LP 393
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+ I L +L + L N++ K
Sbjct: 394 ESIGALIQLDWIFLDDNQLIKL 415
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 29/213 (13%)
Query: 54 HENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
H P TI +L + N LTSL S+ L L L L +N+L L +G+LS+
Sbjct: 158 HLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPESIGSLSR 217
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L L + NQL +LP I QL L NN++++L G + L +L+ ++ NQ+T +
Sbjct: 218 LNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLTYL 277
Query: 168 RR----------------------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
+ +L L +SL NNQ+T + +++ LT L L
Sbjct: 278 PESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLESLR 337
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LS NQLTE + + I L L ++LS N++ +
Sbjct: 338 LSDNQLTE-IPESISDLTELEWLNLSRNQLTEL 369
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
Query: 45 LVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
L NN +T + E A I+ +L++ N L L ++ LT L L L N+L + ++
Sbjct: 39 LENNQLTELPE-AIGSLIQLQELNLASNLLIKLPKTISSLTQLKELNLRENQLADVPDEI 97
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L++LQ L + NQL LP I +QL L+ +N++T L L LT+L +++ N
Sbjct: 98 GFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLETN 157
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+T V + +L L+ + L+ NQ+TS+ S+ L +L L L+ NQLT L + I L
Sbjct: 158 HLT-VLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLT-HLPESIGSL 215
Query: 223 KRLRTVDLSYNKINKF 238
RL + L N++N
Sbjct: 216 SRLNELCLCNNQLNSL 231
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ-------LLV-- 112
++KL V N LT L S+ L +L L L NN+L L +G+L +LQ LL+
Sbjct: 11 LQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQELNLASNLLIKL 70
Query: 113 --------------IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ +NQL +P +I +QL L+ ++N++T L ++ LT+LQ
Sbjct: 71 PKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELF 130
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T + + NL L+ +SL+ N +T + ++ LT L L L NQLT L +
Sbjct: 131 LYSNQLTDL-PESLANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKENQLTS-LPES 188
Query: 219 IRGLKRLRTVDLSYNKI 235
+ L RL+ +DL+ N++
Sbjct: 189 VGSLIRLKKLDLADNQL 205
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 45 LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L N + H+ E+ T + L + N LT L ++ LTDL L L++N+L + +
Sbjct: 292 LSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLESLRLSDNQLTEIPESIS 351
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L++L+ L + +NQL LP+ I L ++L + Y + N++T L + L +L +D NQ
Sbjct: 352 DLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQLTELPESIGALIQLDWIFLDDNQ 411
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ + + F +L L + L+NNQ+T + ++ L +L + L+ N L
Sbjct: 412 LIKLP-ESFSSLIQLRRLYLENNQLTELPVAIGSLVQLEEIKLNGNPL 458
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
S+ LT L L +++N+L L + L LQ L +E NQL LP I QL L
Sbjct: 4 SIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQELNLA 63
Query: 138 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
+N + L + LT+L+ N+ NQ+ V DE L L + L +NQ+T + +
Sbjct: 64 SNLLIKLPKTISSLTQLKELNLRENQLADV-PDEIGFLTQLQELWLSSNQLTHLPEMIGS 122
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LT+L L+L NQLT+ L + + L RL + L N +
Sbjct: 123 LTQLQELFLYSNQLTD-LPESLANLTRLNWLSLETNHL 159
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 42 TLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG 100
+L L +N +T I E+ T + L++ N LT L ++ LT+L +L+ N+L L
Sbjct: 335 SLRLSDNQLTEIPESISDLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQLTELPE 394
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
+G L +L + ++ NQL LP QL LY NN++T L + L +L+ ++
Sbjct: 395 SIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTELPVAIGSLVQLEEIKLN 454
Query: 161 FNQI 164
N +
Sbjct: 455 GNPL 458
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ ++ N LT L S+ L L+W+FL++N+L L +L +L+ L +E NQL L
Sbjct: 379 LETFYLSENQLTELPESIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTEL 438
Query: 122 PSDIQLFSQLGSLYANNNRITS 143
P I QL + N N + S
Sbjct: 439 PVAIGSLVQLEEIKLNGNPLNS 460
>gi|417766867|ref|ZP_12414816.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400350673|gb|EJP02931.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 288
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ T++ + L L L L NQL LL +I LK L+ + L N++
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLKNLKELYLEENQL 246
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKILPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L + L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRMHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++++H+ N LT L ++ L L ++L +N+ +L ++G L L+ LV+ +NQL +L
Sbjct: 167 LQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+I L LY N++T L + L +L ++ NQ ++ Q L
Sbjct: 227 LPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPSEEKERIQRL 280
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + +N L +L + L +L L+L+ N+LK L ++G L KLQ +
Sbjct: 121 LKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKL 180
Query: 112 -------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ NQ LP +I L +L N++ SL + L L+
Sbjct: 181 PQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELY 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
++ NQ+TM+ + + L L +SL+ NQ S
Sbjct: 241 LEENQLTMLPK-QIAALKQLARLSLKGNQFPS 271
>gi|418707285|ref|ZP_13268113.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|421128256|ref|ZP_15588473.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421133246|ref|ZP_15593395.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410022575|gb|EKO89351.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410434268|gb|EKP83407.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410772424|gb|EKR47610.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 374
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG----------------TL 105
+++L++ +N LT L N + L +L L LNNN+L +L ++G TL
Sbjct: 137 LQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTL 196
Query: 106 SK-------LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
SK LQ L + NQL LP++I L +L NNN++ +L + L L+ +
Sbjct: 197 SKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLD 256
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ +NQ ++ +E + L NL + L NNQ+T+++ + L L LYLS+NQ T L ++
Sbjct: 257 LGYNQFKII-PNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTT-LPEE 314
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK L+ ++L+ N++
Sbjct: 315 IGQLKNLQVLELNNNQL 331
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L N + L +L L LNNN+LK+L ++G L L+ L + NQ + +
Sbjct: 206 LQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKII 265
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I+ L L NNN++T+L + L LQ + +NQ T + +E L NL +
Sbjct: 266 PNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTL-PEEIGQLKNLQVL 324
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+ +++ + L L L L +NQL+ + IR L
Sbjct: 325 ELNNNQLKTLSKEIGQLKNLKRLELDNNQLSSEEKERIRKL 365
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 27/201 (13%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L+ L L+ N L + ++G L L++L + NQL
Sbjct: 42 PLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQL 101
Query: 119 EALPSDI------------------------QLFSQLGSLYANNNRITSLDGLLRGLTKL 154
+ P +I QL L LY N N++T L + L L
Sbjct: 102 KTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQL-KNLQELYLNYNQLTILPNEIGQLKNL 160
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
Q ++ NQ+ M +E L NL +++L NNQ+ +++ + L L LYL++NQLT
Sbjct: 161 QALELNNNQL-MTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLT-I 218
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
L ++I LK L+ ++L+ N++
Sbjct: 219 LPNEIGQLKNLQALELNNNQL 239
>gi|449116281|ref|ZP_21752732.1| hypothetical protein HMPREF9726_00717 [Treponema denticola H-22]
gi|448954168|gb|EMB34951.1| hypothetical protein HMPREF9726_00717 [Treponema denticola H-22]
Length = 424
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 17/219 (7%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
G + T+ D++G AL L +N I + + L N LTSL+ ++GLT
Sbjct: 132 CGKNRFTALDIRGLTALQELYCNDNEIASLDVRGLTG-LHTLDCDNNRLTSLD--VQGLT 188
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L WL + N+L SL+ + L+ LQ+L N+L +L D+ + + L +LY +N++TS
Sbjct: 189 ALQWLDCHFNKLTSLD--VHGLTSLQVLECSSNRLTSL--DVHVLTALKNLYCQDNKLTS 244
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
LD +RGLT L+ + N++T + L LD S N I S++ + GLT L
Sbjct: 245 LD--VRGLTGLRTLFCNDNRLTALDVRRLTALQKLDCSS---NAIASID--VRGLTGLHT 297
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
LY +N+LT D++GL L+ + S N++ ++
Sbjct: 298 LYCDNNRLTSL---DVQGLTALQLLVCSDNQLTALNVQD 333
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 14/197 (7%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ S D++G L TL NN +T + ++ L FN LTSL+ + GLT L L
Sbjct: 158 IASLDVRGLTGLHTLDCDNNRLTSLDVQGLTA-LQWLDCHFNKLTSLD--VHGLTSLQVL 214
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
++NRL SL+ + L+ L+ L + N+L +L D++ + L +L+ N+NR+T+LD +
Sbjct: 215 ECSSNRLTSLD--VHVLTALKNLYCQDNKLTSL--DVRGLTGLRTLFCNDNRLTALD--V 268
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
R LT LQ + N I + + + L L ++ NN++TS++ + GLT L L S
Sbjct: 269 RRLTALQKLDCSSNAIASI---DVRGLTGLHTLYCDNNRLTSLD--VQGLTALQLLVCSD 323
Query: 209 NQLTEFLLDDIRGLKRL 225
NQLT + D+ L+ L
Sbjct: 324 NQLTALNVQDLPALQAL 340
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LTS D++G L TL +N +T + ++KL N + S++ +RGLT L+ L
Sbjct: 242 LTSLDVRGLTGLRTLFCNDNRLTALDVRRLTA-LQKLDCSSNAIASID--VRGLTGLHTL 298
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+ +NNRL SL+ Q L+ LQLLV NQL AL ++Q L +L +NR+ D L+
Sbjct: 299 YCDNNRLTSLDVQ--GLTALQLLVCSDNQLTAL--NVQDLPALQALGFQHNRLEE-DALI 353
Query: 149 RGLTKL 154
R L L
Sbjct: 354 RILNSL 359
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E+ L A + + L L L NR+TSLD +RGLT LQ N +T + E
Sbjct: 68 EETVLTATGTKVVLKGALIELVCYKNRLTSLD--VRGLTALQELYCQDNILTSLDVRELT 125
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
LH L N+ T+++ + GLT L LY + N++ D+RGL L T+D N
Sbjct: 126 GLHTL---YCGKNRFTALD--IRGLTALQELYCNDNEIASL---DVRGLTGLHTLDCDNN 177
Query: 234 KINKF 238
++
Sbjct: 178 RLTSL 182
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 29/147 (19%)
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-----GL--------------LRGL 151
LV +N+L +L D++ + L LY +N +TSLD GL +RGL
Sbjct: 88 LVCYKNRLTSL--DVRGLTALQELYCQDNILTSLDVRELTGLHTLYCGKNRFTALDIRGL 145
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
T LQ + N+I + LH LD NN++TS++ + GLT L +L N+L
Sbjct: 146 TALQELYCNDNEIASLDVRGLTGLHTLDC---DNNRLTSLD--VQGLTALQWLDCHFNKL 200
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
T D+ GL L+ ++ S N++
Sbjct: 201 TSL---DVHGLTSLQVLECSSNRLTSL 224
>gi|198451363|ref|XP_002137290.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
gi|261277894|sp|B5DX45.1|SUR8_DROPS RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|198131455|gb|EDY67848.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
Length = 629
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ L L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 150 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPAEIGCLVNLRNLALNENSLTSL 209
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q QL L +N++ + ++ L L + FN+IT V D + L NL +
Sbjct: 210 PESLQNCKQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRITAV-ADNLRQLVNLTML 268
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 269 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 321
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ ++LR L +L L L N+++ L +G L L L
Sbjct: 232 IPPVIYRLRTLTTLYLRFNRITAVADNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 291
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L + +N+++ V
Sbjct: 292 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLSSVPAT- 350
Query: 172 FQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+N ++D +++ N +T M +SLSGLT + LS NQ T + + +
Sbjct: 351 LKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTIT---LSRNQFTSYPTGGPAQFTNVYS 407
Query: 228 VDLSYNKINKF 238
++L +N+I+K
Sbjct: 408 INLEHNRIDKI 418
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G + KL++L +E+N++E LP
Sbjct: 454 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNMRKLRILDLEENRIEVLPH 513
Query: 124 DIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQV 156
+I L +L L N+IT L G L LT L V
Sbjct: 514 EIGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSV 549
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+S+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 333 SLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTITLSRNQFT 392
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 393 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 448
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I +++LR +DL N+
Sbjct: 449 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNMRKLRILDLEENR 507
Query: 235 I 235
I
Sbjct: 508 I 508
>gi|194743364|ref|XP_001954170.1| GF16883 [Drosophila ananassae]
gi|261277884|sp|B3LWU3.1|SUR8_DROAN RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
homolog
gi|190627207|gb|EDV42731.1| GF16883 [Drosophila ananassae]
Length = 641
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I++L + +++T + ++++ + L+L +N++ L ++G L L+ L + +N L +L
Sbjct: 162 IKRLDLSKSSITVIPSTVKDCVQITELYLYSNKIGQLPPEIGCLVNLRNLALNENSLTSL 221
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q +QL L +N++ + ++ L L + FN+IT V D+ + L NL +
Sbjct: 222 PESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAV-ADDLRQLVNLTML 280
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + S++ L L L +SHN L E L +DI L +DL +N++
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDLQHNEL 333
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +L ++ FN +T++ + LR L +L L L N+++ L +G L L L
Sbjct: 244 IPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL 303
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N LE LP DI L +L +N + + + L L M +N++T V
Sbjct: 304 DVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLTSVPAT- 362
Query: 172 FQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+N +D +++ N IT M +SLSGLT + LS NQ T + + +
Sbjct: 363 LKNCKCMDEFNVEGNGITQLPDGMLASLSGLTTIT---LSRNQFTSYPTGGPAQFTNVYS 419
Query: 228 VDLSYNKINKF 238
++L +N+I+K
Sbjct: 420 INLEHNRIDKI 430
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + + L +L L L+NN LK + +G L +L++L +E+N++E LP
Sbjct: 466 ELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIETLPH 525
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +LQ + NQITM+ R +L NL +S+
Sbjct: 526 EIGL-----------------------LHELQRLILQTNQITMLPRS-IGHLGNLTHLSV 561
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
N + + + L L LY++ N E L
Sbjct: 562 SENNLQFLPEEIGSLESLENLYINQNPGLEKL 593
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N LTS+ +L+ ++ + N + L +G L +LS L + + +NQ
Sbjct: 345 SLVRLGMRYNRLTSVPATLKNCKCMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFT 404
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLL---RGLTKLQVFNMDFNQITMVRRDEFQN 174
+ P+ F+ + S+ +NRI + G+ +GLTKL NM N +T + D
Sbjct: 405 SYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL---NMKENMLTALPLD-IGT 460
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
N+ ++L N + + + L L L LS+N L + + + I L+RLR +DL N+
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKK-IPNTIGNLRRLRILDLEENR 519
Query: 235 I 235
I
Sbjct: 520 I 520
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
++ L + ++ + +PS ++ Q+ LY +N+I L + L L+ ++ N +T +
Sbjct: 162 IKRLDLSKSSITVIPSTVKDCVQITELYLYSNKIGQLPPEIGCLVNLRNLALNENSLTSL 221
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ QN + L + L++N++ + + L L LYL N++T + DD+R L L
Sbjct: 222 P-ESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-VADDLRQLVNLTM 279
Query: 228 VDLSYNKINKFGT 240
+ L NKI + G+
Sbjct: 280 LSLRENKIRELGS 292
>gi|449104840|ref|ZP_21741577.1| hypothetical protein HMPREF9730_02474 [Treponema denticola AL-2]
gi|448962326|gb|EMB43016.1| hypothetical protein HMPREF9730_02474 [Treponema denticola AL-2]
Length = 424
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 17/219 (7%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
G + T+ D++G AL L +N I + + L N LTSL+ ++GLT
Sbjct: 132 CGKNRFTALDIRGLTALQELYCNDNEIASLDVRGLTG-LHTLDCDNNRLTSLD--VQGLT 188
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L WL + N+L SL+ + L+ LQ+L N+L +L D+ + + L +LY +N++TS
Sbjct: 189 ALQWLDCHFNKLTSLD--VHGLTSLQVLECSSNRLTSL--DVHVLTALKNLYCQDNKLTS 244
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
LD +RGLT L+ + N++T + L LD S N I S++ + GLT L
Sbjct: 245 LD--VRGLTGLRTLFCNDNRLTALDVRRLTALQKLDCSS---NAIASID--VRGLTGLHT 297
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
LY +N+LT D++GL L+ + S N++ ++
Sbjct: 298 LYCDNNRLTSL---DVQGLTALQLLVCSDNQLTALNVQD 333
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 14/197 (7%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
+ S D++G L TL NN +T + ++ L FN LTSL+ + GLT L L
Sbjct: 158 IASLDVRGLTGLHTLDCDNNRLTSLDVQGLTA-LQWLDCHFNKLTSLD--VHGLTSLQVL 214
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
++NRL SL+ + L+ L+ L + N+L +L D++ + L +L+ N+NR+T+LD +
Sbjct: 215 ECSSNRLTSLD--VHVLTALKNLYCQDNKLTSL--DVRGLTGLRTLFCNDNRLTALD--V 268
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
R LT LQ + N I + + + L L ++ NN++TS++ + GLT L L S
Sbjct: 269 RRLTALQKLDCSSNAIASI---DVRGLTGLHTLYCDNNRLTSLD--VQGLTALQLLVCSD 323
Query: 209 NQLTEFLLDDIRGLKRL 225
NQLT + D+ L+ L
Sbjct: 324 NQLTALNVQDLPALQAL 340
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LTS D++G L TL +N +T + ++KL N + S++ +RGLT L+ L
Sbjct: 242 LTSLDVRGLTGLRTLFCNDNRLTALDVRRLTA-LQKLDCSSNAIASID--VRGLTGLHTL 298
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+ +NNRL SL+ Q L+ LQLLV NQL AL ++Q L +L +NR+ D L+
Sbjct: 299 YCDNNRLTSLDVQ--GLTALQLLVCSDNQLTAL--NVQDLPALQALGFQHNRLEE-DALI 353
Query: 149 RGLTKL 154
R L L
Sbjct: 354 RILNSL 359
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E+ L A + + L L L NR+TSLD +RGLT LQ N +T + E
Sbjct: 68 EETVLTATGTKVVLKGALIELVCYKNRLTSLD--VRGLTTLQELYCQDNILTSLDVRELT 125
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
LH L N+ T+++ + GLT L LY + N++ D+RGL L T+D N
Sbjct: 126 GLHTL---YCGKNRFTALD--IRGLTALQELYCNDNEIASL---DVRGLTGLHTLDCDNN 177
Query: 234 KINKF 238
++
Sbjct: 178 RLTSL 182
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 29/147 (19%)
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-----GL--------------LRGL 151
LV +N+L +L D++ + L LY +N +TSLD GL +RGL
Sbjct: 88 LVCYKNRLTSL--DVRGLTTLQELYCQDNILTSLDVRELTGLHTLYCGKNRFTALDIRGL 145
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
T LQ + N+I + LH LD NN++TS++ + GLT L +L N+L
Sbjct: 146 TALQELYCNDNEIASLDVRGLTGLHTLDC---DNNRLTSLD--VQGLTALQWLDCHFNKL 200
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
T D+ GL L+ ++ S N++
Sbjct: 201 TSL---DVHGLTSLQVLECSSNRLTSL 224
>gi|320168689|gb|EFW45588.1| tyrosine-protein kinase transforming protein Src [Capsaspora
owczarzaki ATCC 30864]
Length = 1510
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 8/209 (3%)
Query: 35 KGTPALITLLLVN-NNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFL 90
G P T+L +N N IT I NA + L++ N +TS++ N+ GL LN L L
Sbjct: 758 SGIPINTTILYLNLNQITSISANALTGLTALTWLYLQSNQITSISANAFTGLAALNRLDL 817
Query: 91 NNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDG-L 147
++N++ S+ + LS L +V+ NQ ++P S + L S+ +NN+ITS+
Sbjct: 818 SSNQIASISANVFAGLSALTGVVLSGNQFTSMPTSALAGLPMLKSVSLSNNQITSIPATA 877
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYL 206
GLT L N+ NQ+ + F L L + L NNQITS+++ + +GL+ L L+L
Sbjct: 878 FAGLTALIGVNLAGNQLRSIPTSAFTGLTALIQLVLPNNQITSISANAFAGLSALTLLHL 937
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+NQ+T + GL + + L+ N +
Sbjct: 938 YNNQITSISANAFSGLTAMTALALNDNPL 966
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 65 LHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALP 122
L++ N +TS++ N+L GLT L WL+L +N++ S+ T L+ L L + NQ+ ++
Sbjct: 767 LYLNLNQITSISANALTGLTALTWLYLQSNQITSISANAFTGLAALNRLDLSSNQIASIS 826
Query: 123 SDI-QLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+++ S L + + N+ TS+ L GL L+ ++ NQIT + F L L
Sbjct: 827 ANVFAGLSALTGVVLSGNQFTSMPTSALAGLPMLKSVSLSNNQITSIPATAFAGLTALIG 886
Query: 181 ISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++L NQ+ S+ S+ +GLT L L L +NQ+T + GL L + L N+I
Sbjct: 887 VNLAGNQLRSIPTSAFTGLTALIQLVLPNNQITSISANAFAGLSALTLLHLYNNQITSI 945
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 7/213 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDL 85
++ + L G AL +L L N IT I ENAF + L + N + S++ + GLT L
Sbjct: 394 ISENALTGLTALTSLDLSANQITSISENAFASLTALTVLDLSNNQIASISATAFAGLTAL 453
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L LN N+ S+ L L+ L L I+ NQ+ + ++ + + L L NN++ S
Sbjct: 454 TGLGLNINQFTSIPTSALTGLTALTFLRIDYNQITNISANALAGLNALTFLNMANNQLRS 513
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKL 201
+ LT L V N+ NQ+ V F L L + L NNQITS+++S + LT L
Sbjct: 514 IPSSAFTSLTALTVLNLGDNQLRSVPSSAFTGLTTLMGLGLHNNQITSISASEFTSLTAL 573
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L+L +NQ+T + GL L + L N
Sbjct: 574 TQLHLHNNQITSISANAFTGLTALTRLTLDGNP 606
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
++++ L G AL L L +N IT I NAF + +L + N + S++ N GL+ L
Sbjct: 777 ISANALTGLTALTWLYLQSNQITSISANAFTGLAALNRLDLSSNQIASISANVFAGLSAL 836
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN---NRI 141
+ L+ N+ S+ L L L+ + + NQ+ ++P+ F+ L +L N N++
Sbjct: 837 TGVVLSGNQFTSMPTSALAGLPMLKSVSLSNNQITSIPATA--FAGLTALIGVNLAGNQL 894
Query: 142 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLT 199
S+ GLT L + NQIT + + F L L + L NNQITS+++ + SGLT
Sbjct: 895 RSIPTSAFTGLTALIQLVLPNNQITSISANAFAGLSALTLLHLYNNQITSISANAFSGLT 954
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLK 223
+ L L+ N LT GL+
Sbjct: 955 AMTALALNDNPLTTLPPGLFTGLQ 978
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L A+PS I + + + LY N N+ITS+ L GLT L + NQIT + + F L
Sbjct: 753 LSAIPSGIPINTTI--LYLNLNQITSISANALTGLTALTWLYLQSNQITSISANAFTGLA 810
Query: 177 NLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ + L +NQI S+++++ +GL+ L + LS NQ T + GL L++V LS N+I
Sbjct: 811 ALNRLDLSSNQIASISANVFAGLSALTGVVLSGNQFTSMPTSALAGLPMLKSVSLSNNQI 870
Query: 236 NKF 238
Sbjct: 871 TSI 873
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 9/190 (4%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLV 112
+ P T +L + N LTS++ ++ GLT L++L+L N++ S+ TLS L +L
Sbjct: 51 PSGIPVTTTQLSLQGNQLTSISADAFTGLTALSYLYLQTNQITSISASTFTTLSALTVLY 110
Query: 113 IEQNQLEALPSDIQLFSQLGSL---YANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVR 168
+ N + ++P + F+ L +L Y ++N +TS+ L GL+ L + NQIT +
Sbjct: 111 LNNNLMTSIP--VNAFANLTALKYLYLSSNLLTSISAAALTGLSALTQLYLLNNQITSIP 168
Query: 169 RDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
F L L ++L NNQI ++++ + +GLT L L L N T +GL
Sbjct: 169 TQAFPGLTALTYLALDNNQIANISANAFTGLTALTRLALDGNPFTTLPPGLFKGLAYGLY 228
Query: 228 VDLSYNKINK 237
+ SY ++
Sbjct: 229 LSASYQYLSP 238
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 35 KGTPALITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFL 90
G P T+L L +N IT I ENA + L + N +TS++ N+ LT L L L
Sbjct: 375 SGIPINTTILYLQSNQITSISENALTGLTALTSLDLSANQITSISENAFASLTALTVLDL 434
Query: 91 NNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDG-L 147
+NN++ S+ L+ L L + NQ ++P S + + L L + N+IT++
Sbjct: 435 SNNQIASISATAFAGLTALTGLGLNINQFTSIPTSALTGLTALTFLRIDYNQITNISANA 494
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYL 206
L GL L NM NQ+ + F +L L ++L +NQ+ S+ SS +GLT L L L
Sbjct: 495 LAGLNALTFLNMANNQLRSIPSSAFTSLTALTVLNLGDNQLRSVPSSAFTGLTTLMGLGL 554
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+T + L L + L N+I
Sbjct: 555 HNNQITSISASEFTSLTALTQLHLHNNQITSI 586
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 28/151 (18%)
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRR 169
+V L A+PS I + + + LY +N+ITS+ + L GLT L ++ NQIT +
Sbjct: 363 VVCNGRSLSAIPSGIPINTTI--LYLQSNQITSISENALTGLTALTSLDLSANQITSISE 420
Query: 170 DEFQNLHNLDSISLQNNQITSMN-------------------------SSLSGLTKLAYL 204
+ F +L L + L NNQI S++ S+L+GLT L +L
Sbjct: 421 NAFASLTALTVLDLSNNQIASISATAFAGLTALTGLGLNINQFTSIPTSALTGLTALTFL 480
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ +NQ+T + + GL L ++++ N++
Sbjct: 481 RIDYNQITNISANALAGLNALTFLNMANNQL 511
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMV 167
Q+ I N L L + L LY +N+ITS+ GL L ++ NQI +
Sbjct: 773 QITSISANALTGL-------TALTWLYLQSNQITSISANAFTGLAALNRLDLSSNQIASI 825
Query: 168 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ F L L + L NQ TSM S+L+GL L + LS+NQ+T GL L
Sbjct: 826 SANVFAGLSALTGVVLSGNQFTSMPTSALAGLPMLKSVSLSNNQITSIPATAFAGLTALI 885
Query: 227 TVDLSYNKINKFGT 240
V+L+ N++ T
Sbjct: 886 GVNLAGNQLRSIPT 899
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L A+PS I + + SL N++TS+ GLT L + NQIT + F L
Sbjct: 47 LSAIPSGIPVTTTQLSL--QGNQLTSISADAFTGLTALSYLYLQTNQITSISASTFTTLS 104
Query: 177 NLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L + L NN +TS+ ++ + LT L YLYLS N LT + GL L + L N+I
Sbjct: 105 ALTVLYLNNNLMTSIPVNAFANLTALKYLYLSSNLLTSISAAALTGLSALTQLYLLNNQI 164
Query: 236 NKFGTR 241
T+
Sbjct: 165 TSIPTQ 170
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLN---NSLRG---- 81
+ + L G AL L + N IT+I NA G N LT LN N LR
Sbjct: 466 IPTSALTGLTALTFLRIDYNQITNISANAL--------AGLNALTFLNMANNQLRSIPSS 517
Query: 82 ----LTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLY 135
LT L L L +N+L+S+ T L+ L L + NQ+ ++ S+ + L L+
Sbjct: 518 AFTSLTALTVLNLGDNQLRSVPSSAFTGLTTLMGLGLHNNQITSISASEFTSLTALTQLH 577
Query: 136 ANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+NN+ITS+ GLT L +D N T + F L N
Sbjct: 578 LHNNQITSISANAFTGLTALTRLTLDGNPFTTLPPGLFSGLQN 620
>gi|456972990|gb|EMG13268.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 379
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG----------------TL 105
+++L++ +N LT L N + L +L L LNNN+L +L ++G TL
Sbjct: 142 LQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTL 201
Query: 106 SK-------LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
SK LQ L + NQL LP++I L +L NNN++ +L + L L+ +
Sbjct: 202 SKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLD 261
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ +NQ ++ +E + L NL + L NNQ+T+++ + L L LYLS+NQ T L ++
Sbjct: 262 LGYNQFKII-PNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTT-LPEE 319
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK L+ ++L+ N++
Sbjct: 320 IGQLKNLQVLELNNNQL 336
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L N + L +L L LNNN+LK+L ++G L L+ L + NQ + +
Sbjct: 211 LQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKII 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I+ L L NNN++T+L + L LQ + +NQ T + +E L NL +
Sbjct: 271 PNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTL-PEEIGQLKNLQVL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+ +++ + L L L L +NQL+ + IR L
Sbjct: 330 ELNNNQLKTLSKEIGQLKNLKRLELDNNQLSSEEKERIRKL 370
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 27/201 (13%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L+ L L+ N L + ++G L L++L + NQL
Sbjct: 47 PLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQL 106
Query: 119 EALPSDI------------------------QLFSQLGSLYANNNRITSLDGLLRGLTKL 154
+ P +I QL L LY N N++T L + L L
Sbjct: 107 KTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQL-KNLQELYLNYNQLTILPNEIGQLKNL 165
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
Q ++ NQ+ M +E L NL +++L NNQ+ +++ + L L LYL++NQLT
Sbjct: 166 QALELNNNQL-MTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLT-I 223
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
L ++I LK L+ ++L+ N++
Sbjct: 224 LPNEIGQLKNLQALELNNNQL 244
>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
Length = 521
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 326 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 385
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L LQ +D NQ+T + + E + L NL +
Sbjct: 386 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPK-EIEQLQNLRVL 444
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L L L L NQLT F +IR LK L+ + L N +
Sbjct: 445 DLDNNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQELHLYLNPL 497
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L L L NR+ +L ++G L LQ L + QNQL L
Sbjct: 349 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL 408
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L L+V ++D NQ+T + + E L NL +
Sbjct: 409 PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK-EIGQLQNLQEL 467
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NQ+T+ + L L L+L N L+ IR L
Sbjct: 468 CLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIRRL 508
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L + QL L
Sbjct: 280 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 339
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L L++ + N+IT + + E L NL +
Sbjct: 340 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPK-EIGQLQNLQRL 398
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L NQLT L +I L+ LR +DL N++
Sbjct: 399 DLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKEIEQLQNLRVLDLDNNQL 451
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ LT+L + L +L L L+ N L +L ++G L LQ L + QN+L L
Sbjct: 211 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++T+L +R L LQ ++ NQ+T + + E L NL ++
Sbjct: 271 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK-EIGQLQNLKTL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 330 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 382
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + FN+LT+L + L +L L LN+ +L +L ++G L LQ L + N L L
Sbjct: 96 LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L L N+ ++T+L + L LQ ++ FN +T + + E L NL +
Sbjct: 156 PKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPK-EVGQLENLQRL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L + ++T++ + L L L LS N LT L ++ L+ L+ +DL N++
Sbjct: 215 NLNSQKLTTLPKEIGQLRNLQELDLSFNSLT-TLPKEVGQLENLQRLDLHQNRL 267
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + FN+LT+L + L +L L LN+ +L +L ++G L LQ L + N L L
Sbjct: 188 LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L L + NR+ +L + L LQ +++ N++T + + E + L NL +
Sbjct: 248 PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK-EIRQLRNLQEL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L QLT L +I L+ L+T++L N++
Sbjct: 307 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT-TLPKEIGELQNLKTLNLLDNQL 359
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L ++ L +L L L +N+L +L ++G L LQ L + N L
Sbjct: 47 PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP ++ L L N+ ++T+L + L LQ ++ FN +T + + E L NL
Sbjct: 107 TTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPK-EVGQLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L + ++T++ + L L L LS N LT L ++ L+ L+ ++L+ K+
Sbjct: 166 QRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLT-TLPKEVGQLENLQRLNLNSQKL 221
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++ L L+LL + NQL ALP +I L L
Sbjct: 40 LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ N +T+L + L LQ N++ ++T + + E L NL + L N +T++
Sbjct: 100 DLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPK-EIGQLRNLQELDLSFNSLTTLPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L+ +LT L +I L+ L+ +DLS+N +
Sbjct: 159 VGQLENLQRLNLNSQKLT-TLPKEIGQLRNLQELDLSFNSL 198
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 43 LLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L+L N IT A P I ++L + N LT+L + L +L L L+ N+L
Sbjct: 375 LVLRENRIT-----ALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 429
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+L ++ L L++L ++ NQL LP +I L L + N++T+ +R L LQ
Sbjct: 430 TLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQE 489
Query: 157 FNMDFNQITMVRRDEFQNL 175
++ N ++ + + L
Sbjct: 490 LHLYLNPLSSKEKKRIRRL 508
>gi|124008181|ref|ZP_01692878.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123986280|gb|EAY26102.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 391
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 15/211 (7%)
Query: 17 LIDLEPETGSHP------LTSDDLKGTPALI-------TLLLVNNNITHI-HENAFPPTI 62
LI L PE G L + L PA I +L+L NN + + HE +
Sbjct: 165 LITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKNL 224
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
++ N L L + L +L L+L N+L+ L QL L KLQ+L +++N +P
Sbjct: 225 HTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQKNNFSEVP 284
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ I + L L+ NNN++TSL+ + L LQ+ ++ N+IT + ++ +L +S
Sbjct: 285 AAITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENKITELPTS-IGSIQSLKHLS 343
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L +N +TS+ + L KL LYL +NQL +
Sbjct: 344 LSDNMLTSLPQEIGQLRKLQALYLRNNQLPK 374
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 44/268 (16%)
Query: 1 MSRFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP 60
++RF + + L +L PE G DL L L+L NN + + PP
Sbjct: 80 IARFKNLQVLNLQQNKLTELPPEIG-------DLT---KLQKLILSNNQLEKL-----PP 124
Query: 61 TIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE 114
I KL V N LT+L + L L +L++ NN+L +L ++G L++L+ L +E
Sbjct: 125 EIGKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLE 184
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD---- 170
NQL LP+ I + L SL NNNR+ L + L L F + N++ + ++
Sbjct: 185 HNQLTQLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQEILTL 244
Query: 171 ------------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L L + LQ N + + ++++ LT L L+L++NQLT
Sbjct: 245 QNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQKNNFSEVPAAITKLTNLQKLWLNNNQLT 304
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L +I L+ L+ + L NKI + T
Sbjct: 305 S-LNAEIGKLQNLQILYLEENKITELPT 331
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LT L + LT L L L+NN+L+ L ++G L+ L L + N+L LP +
Sbjct: 89 LNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIGKLTHLLELRVSANRLTTLPPE 148
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L LY NN++ +L + L +L+ ++ NQ+T + L+NL S+ L
Sbjct: 149 IGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPAS-IGKLNNLQSLILN 207
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
NN++ + + L L YL++N+L E L +I L+ L+ + L N++ + +
Sbjct: 208 NNRVNQLPHEIGQLKNLHTFYLANNRLKE-LPQEILTLQNLKKLYLVGNQLQQLPPQ 263
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P + + + ++ L+ + +L L L N+L L ++G L+KLQ L++ NQL
Sbjct: 60 PNDVYMMKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQL 119
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
E LP +I + L L + NR+T+L + L LQ + N++ + E L L
Sbjct: 120 EKLPPEIGKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITL-PPEIGQLAQL 178
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L++NQ+T + +S+ L L L L++N++ + L +I LK L T L+ N++ +
Sbjct: 179 KRLFLEHNQLTQLPASIGKLNNLQSLILNNNRVNQ-LPHEIGQLKNLHTFYLANNRLKEL 237
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
TSL +L D+ + L N + L ++ LQ+L ++QN+L LP +I ++L
Sbjct: 51 TSLEVALEQPNDVYMMKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQ 110
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NN++ L + LT L + N++T + E L +L + + NN++ ++
Sbjct: 111 KLILSNNQLEKLPPEIGKLTHLLELRVSANRLTTL-PPEIGKLQSLQYLYIPNNKLITLP 169
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L +L L+L HNQLT+ L I L L+++ L+ N++N+
Sbjct: 170 PEIGQLAQLKRLFLEHNQLTQ-LPASIGKLNNLQSLILNNNRVNQL 214
>gi|320166216|gb|EFW43115.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 813
Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats.
Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 13/217 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
+++ G AL L+L +N+I+ I AF +++L++ N + S+ + LT L
Sbjct: 79 ISASAFVGLTALTVLILQDNHISSIDAAAFTDLTALKQLNMQGNGIASIPATAFTSLTSL 138
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSD----IQLFSQLGSLYANNNR 140
N+L++ N++ S+ L L+ L + + N+ ++PSD + +QL Y
Sbjct: 139 NFLYMGTNQITSMPSSLFAGLTALYFISLSSNKFTSIPSDAFTGLTALTQLDLQYCP--- 195
Query: 141 ITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGL 198
ITS+ LT L+V ++ N IT V + F L L S++L N +T +++ + +GL
Sbjct: 196 ITSVPANAFADLTALKVLYLNGNWITSVSANAFTGLVALTSLNLNQNLLTGVSANAFTGL 255
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
T L YLYL NQ+ + + GL L V L+ N +
Sbjct: 256 TALNYLYLHLNQIVDISANTFAGLTALTRVTLNGNPL 292
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 110 LLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMV 167
+L ++ NQ+ + + + + L L +N I+S+D LT L+ NM N I +
Sbjct: 68 ILYLQDNQISTISASAFVGLTALTVLILQDNHISSIDAAAFTDLTALKQLNMQGNGIASI 127
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
F +L +L+ + + NQITSM SSL +GLT L ++ LS N+ T D GL L
Sbjct: 128 PATAFTSLTSLNFLYMGTNQITSMPSSLFAGLTALYFISLSSNKFTSIPSDAFTGLTALT 187
Query: 227 TVDLSYNKI 235
+DL Y I
Sbjct: 188 QLDLQYCPI 196
>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 432
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 234 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 293
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L LQ +D NQ+T + + E + L NL +
Sbjct: 294 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPK-EIEQLQNLRVL 352
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L L L L NQLT F +IR LK L+ + L N +
Sbjct: 353 DLDNNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQELHLYLNPL 405
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L + L +L L L NR+ +L ++G L LQ L + QNQL L
Sbjct: 257 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL 316
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L L+V ++D NQ+T + + E L NL +
Sbjct: 317 PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK-EIGQLQNLQEL 375
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L NQ+T+ + L L L+L N L+
Sbjct: 376 CLDENQLTTFPKEIRQLKNLQELHLYLNPLS 406
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L + QL L
Sbjct: 188 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L L++ + N+IT + + E L NL +
Sbjct: 248 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPK-EIGQLQNLQRL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L NQLT L +I L+ LR +DL N++
Sbjct: 307 DLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKEIEQLQNLRVLDLDNNQL 359
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L ++ L +L L L +N+L +L ++G L LQ L + N L
Sbjct: 47 PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP ++ L L N+ ++T+L + L LQ ++ FN +T + + E L NL
Sbjct: 107 TTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPK-EVGQLENL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++ ++ + L L L L+ N+LT L +IR L+ L+ +DL N++
Sbjct: 166 QRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLT-TLPKEIRQLRNLQELDLHRNQL 221
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ LT+L + L +L L L+ N L +L ++G L LQ L + QN+L L
Sbjct: 119 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++T+L +R L LQ ++ NQ+T + + E L NL ++
Sbjct: 179 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK-EIGQLQNLKTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 238 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 290
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++ L L+LL + NQL ALP +I L L
Sbjct: 40 LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ N +T+L + L LQ N++ ++T + + E L NL + L N +T++
Sbjct: 100 DLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPK-EIGQLRNLQELDLSFNSLTTLPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L N+L + +I LK L+ +DL+ NK+
Sbjct: 159 VGQLENLQRLDLHQNRLATLPM-EIGQLKNLQELDLNSNKL 198
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 LLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L+L N IT A P I ++L + N LT+L + L +L L L+ N+L
Sbjct: 283 LVLRENRIT-----ALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 337
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+L ++ L L++L ++ NQL LP +I L L + N++T+ +R L LQ
Sbjct: 338 TLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQE 397
Query: 157 FNMDFNQITMVRR----DEFQNLH 176
++ N ++ + D FQN+
Sbjct: 398 LHLYLNPLSSKEKKGFEDYFQNVK 421
>gi|421109036|ref|ZP_15569563.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
gi|410005803|gb|EKO59587.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
Length = 353
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N LT++ + L L L L+ NRL ++ ++G L LQ+L ++ NQ+ +
Sbjct: 111 SLKNLDLFRNQLTTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVS 170
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I+ +L L NNR ++ G L LQ N+ NQ+ + ++ Q L NL +
Sbjct: 171 LPKEIEELQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQ-LQNLRN 229
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQIT + + + L L LYLS NQ T L +I LK LR + L+ N++
Sbjct: 230 LVLDRNQITILPTEVLQLQNLQELYLSENQFTS-LPKEIDKLKNLRWLSLNNNRL 283
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 56 NAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG---QLGTLS 106
NA P I +L + N + SL + L +L L L NNR K++ G QL L
Sbjct: 146 NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEALQLKNLQ 205
Query: 107 KLQL--------------------LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
KL L LV+++NQ+ LP+++ L LY + N+ TSL
Sbjct: 206 KLNLSENQLVSIPKEILQLQNLRNLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPK 265
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
+ L L+ +++ N++T + + E L NL + L NNQ+T++ + L L L L
Sbjct: 266 EIDKLKNLRWLSLNNNRLTTLPK-EIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLEL 324
Query: 207 SHNQLT 212
N L+
Sbjct: 325 DSNPLS 330
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + F NLT+ + +L L L+ N L L ++ L LQ L + N+L L
Sbjct: 43 VRVLDLSFQNLTTFPKEIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +L N++T++ + L L+ N+ N++ V + E L NL +
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLTTVPKEVMLLQTLEKLNLSLNRLNAVPK-EIGQLKNLQIL 161
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQI S+ + L +L L L +N+ + ++ LK L+ ++LS N++
Sbjct: 162 KLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEALQ-LKNLQKLNLSENQL 214
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 39 ALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
L L+L NN ++ A ++KL++ N L S+ + L +L L L+ N++
Sbjct: 180 ELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQLQNLRNLVLDRNQITI 239
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L ++ L LQ L + +NQ +LP +I L L NNNR+T+L + L LQ
Sbjct: 240 LPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLNNNRLTTLPKEIGQLKNLQRL 299
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ NQ+T + + E L NL + L +N ++S
Sbjct: 300 ELGNNQLTNLPK-EIGQLKNLQRLELDSNPLSS 331
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N +T L + L +L L+L+ N+ SL ++ L L+ L + N+L L
Sbjct: 227 LRNLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLNNNRLTTL 286
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
P +I L L NN++T+L + L LQ +D N ++ +++
Sbjct: 287 PKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLSSKEKEKV 337
>gi|418727836|ref|ZP_13286423.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409958898|gb|EKO22676.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 241
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L N + L +L L LNNN+LK+L ++G L LQ L + NQ + +
Sbjct: 73 LQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLQRLDLGYNQFKII 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I+ L L NNN++T+L + L LQ + +NQ T + +E L NL +
Sbjct: 133 PNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTL-PEEIGQLKNLQVL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+ +++ + L L L L +NQL+ + IR L
Sbjct: 192 ELNNNQLKTLSKEIGQLKNLQRLELDNNQLSSEEKERIRKL 232
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG----------------TL 105
++ L + N L +L+ + L +L L LNNN+L +L ++G TL
Sbjct: 4 LQALELNNNQLKTLSKEIGQLKNLQRLELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTL 63
Query: 106 SK-------LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
SK LQ L + NQL LP++I L +L NNN++ +L + L LQ +
Sbjct: 64 SKEIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLQRLD 123
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ +NQ ++ +E + L NL + L NNQ+T+++ + L L LYLS+NQ T L ++
Sbjct: 124 LGYNQFKII-PNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFT-TLPEE 181
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK L+ ++L+ N++
Sbjct: 182 IGQLKNLQVLELNNNQL 198
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
+ +L L LNNN+LK+L ++G L LQ L + NQL LP +I L +L NN++
Sbjct: 1 MKNLQALELNNNQLKTLSKEIGQLKNLQRLELNNNQLMTLPEEIGQLKNLQTLNLWNNQL 60
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
+L + L LQ +++NQ+T++ +E L NL ++ L NNQ+ +++ + L L
Sbjct: 61 MTLSKEIGQLKNLQELYLNYNQLTIL-PNEIGQLKNLQALELNNNQLKTLSKEIGQLKNL 119
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L +NQ + + ++I L+ L+ ++L+ N++
Sbjct: 120 QRLDLGYNQF-KIIPNEIEQLQNLQVLELNNNQL 152
>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
2006001855]
Length = 576
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ FN L+++ ++ L L L L NRL++L ++G L L L + +NQL L
Sbjct: 74 LQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQLATL 133
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I+L L L + +R+T L + L+ L++ N+ +N+++ V +E L NL +
Sbjct: 134 PAEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKILNVSYNKVS-VFPEEIGKLQNLKDL 192
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NN+I ++ + L L L L N+LT L +I L+ L+T++L YNK+
Sbjct: 193 DLSNNRIQVVSEKVGKLRNLERLNLIENRLT-VLPKEIGQLQNLQTLNLGYNKL 245
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L+V +N ++ + L +L L L+NNR++ + ++G L L+ L + +N+L L
Sbjct: 166 LKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++ ++ + L L+ ++ N++ ++ + E + NL S+
Sbjct: 226 PKEIGQLQNLQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKVLPK-ELGTIANLQSL 284
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L +N+I ++ + L L L LS NQ + L +I L+ L+++DLS N+
Sbjct: 285 KLNDNRIVNLPKEIELLQNLRSLDLSGNQF-KVLPKEIGRLQNLQSLDLSDNQ 336
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 25/231 (10%)
Query: 3 RFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHI-HENAFPPT 61
+ S F + NL DL+ + S+ + L L L+ N +T + E
Sbjct: 175 KVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEIGQLQN 234
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G+N L ++ + L L L L++N LK L +LGT++ LQ L + N++ L
Sbjct: 235 LQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVNL 294
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+L L SL + N+ L E L NL S+
Sbjct: 295 PKEIELLQNLRSLDLSGNQFKVLP------------------------KEIGRLQNLQSL 330
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
L +NQ T++ S + L L L + N L D I+ L +D SY
Sbjct: 331 DLSDNQFTTLPSEVGELRNLKKLNIDSNPLLPGEKDKIQNLLPNCEIDSSY 381
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 49 NITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ + FP I KL + N + ++ + L +L L L NRL L ++
Sbjct: 170 NVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEI 229
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L LQ L + N+L +P +I L L ++N + L L + LQ ++ N
Sbjct: 230 GQLQNLQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDN 289
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL--LDDIR 220
+I + + E + L NL S+ L NQ + + L L L LS NQ T + ++R
Sbjct: 290 RIVNLPK-EIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGELR 348
Query: 221 GLKRL 225
LK+L
Sbjct: 349 NLKKL 353
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
+R L +L L L NRLK+L ++G L L+ L +E N+L+ LP +I+ L L +
Sbjct: 444 EIRRLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIEQLQNLRGLNLH 503
Query: 138 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
NR + L KLQ ++ NQ+T + E L NL ++L +N ++
Sbjct: 504 QNRFKIFPKEIGQLRKLQKLDLSVNQLTTLPA-EIGQLQNLQELNLSDNPLS 554
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
+LR D L L++ L L ++G L LQ L + N+L +P +I+ +L SL
Sbjct: 44 ALRNPKDAQILVLSSQELTVLPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLY 103
Query: 138 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
NR+ +L E L NL +SL NQ+ ++ + +
Sbjct: 104 GNRLEALP------------------------PEIGQLQNLSWLSLSKNQLATLPAEIKL 139
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L YL LS ++LT L I L L+ +++SYNK++ F
Sbjct: 140 LQNLQYLNLSKDRLT-ILPKGIGELSNLKILNVSYNKVSVF 179
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L +L + L +L L L+ NR K ++G L KLQ L + NQL L
Sbjct: 474 LRGLSLEANELKTLPKEIEQLQNLRGLNLHQNRFKIFPKEIGQLRKLQKLDLSVNQLTTL 533
Query: 122 PSDIQLFSQLGSLYANNNRIT 142
P++I L L ++N ++
Sbjct: 534 PAEIGQLQNLQELNLSDNPLS 554
>gi|427720310|ref|YP_007068304.1| adenylate cyclase [Calothrix sp. PCC 7507]
gi|427352746|gb|AFY35470.1| Adenylate cyclase [Calothrix sp. PCC 7507]
Length = 317
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L V N+LT+L +++ LT+L L N+L SL ++G LS LQLL I NQL +L
Sbjct: 78 LEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSL 137
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I S L LY +N+++SL + LT L+ ++ NQ++ + R E L NL S+
Sbjct: 138 PREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPR-EIGQLFNLQSL 196
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L N++ + S + L+ L L L NQL+ L +I L LR++ L N+++
Sbjct: 197 YLYKNRLIDLPSEIGQLSHLESLNLGDNQLSN-LPREIGQLSNLRSLGLGENQLSSL 252
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 97/167 (58%), Gaps = 2/167 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L+SL + LT+L L L +N+L SL ++G L LQ L + +N+L LPS+
Sbjct: 150 LYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSE 209
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I S L SL +N++++L + L+ L+ + NQ++ + +EF L NL + L
Sbjct: 210 IGQLSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLP-NEFTQLTNLQRLDLS 268
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
NQ++S+ + LT L +L L +NQL+ L +I L LR++DL+
Sbjct: 269 FNQLSSLPKKIGQLTNLQWLILHNNQLSS-LPSEIGQLTNLRSLDLA 314
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L +G N L+SL + L +L L+L NRL L ++G LS L+ L + NQL L
Sbjct: 170 LRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNL 229
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I S L SL N+++SL LT LQ ++ FNQ++ + + + L NL +
Sbjct: 230 PREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPK-KIGQLTNLQWL 288
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLS 207
L NNQ++S+ S + LT L L L+
Sbjct: 289 ILHNNQLSSLPSEIGQLTNLRSLDLA 314
>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
Length = 1162
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 37/246 (15%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLR 80
L+S+ ++ PA + L L ++ + A P I KL ++ N + + +SL
Sbjct: 374 LSSNKIEKIPASLCTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLC 433
Query: 81 GLTDLNWLFLNN------NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L L L +N+ N L S+ ++ L +++L ++ N+++ +P+ + QL L
Sbjct: 434 ALQQLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTEL 493
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEF 172
Y N N +TS+ + L +++ N+ FN+I + DE
Sbjct: 494 YMNGNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEI 553
Query: 173 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
L ++ ++L NN++ + +SL L +L LY++ N LT + D+I LK + T++LS+
Sbjct: 554 SKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTS-IPDEIGKLKSMETLNLSF 612
Query: 233 NKINKF 238
NKI K
Sbjct: 613 NKIEKI 618
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 29/206 (14%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L + FN + + +SL L L L++N+N L S+ ++G L ++ L + N++E
Sbjct: 322 SMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEK 381
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR------------ 168
+P+ + QL L N +T++ + L + + N+D N++ +
Sbjct: 382 IPASLCTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTEL 441
Query: 169 ----------------RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
DE L ++ ++L NN++ + +SL L +L LY++ N LT
Sbjct: 442 DMNDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALT 501
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINKF 238
+ D+I LK ++ ++L +NKI+K
Sbjct: 502 S-IPDEISKLKSMKILNLYFNKIDKI 526
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
L +V + I HE ++KL + FN ++ + SL L L L + +N L S+ ++
Sbjct: 218 LTIVPSEIGECHE------LQKLDLSFNKISKIPESLYALEQLTELNMRSNALTSVPDEI 271
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L ++ L + N++E +P+ L L KL NM N
Sbjct: 272 GKLKSMKTLNLSSNKIEKIPAS-----------------------LCALEKLTELNMGSN 308
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+T + DE L +++++ L N+I + SL L KL LY++ N LT + D+I L
Sbjct: 309 ALTSI-PDEIGKLKSMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTS-VPDEIGKL 366
Query: 223 KRLRTVDLSYNKINKF 238
K ++T++LS NKI K
Sbjct: 367 KSMKTLNLSSNKIEKI 382
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ FN + + +SL L L L + +N L S+ ++ L +++L ++ N+++
Sbjct: 512 SMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKK 571
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR------------ 168
+P+ + QL LY N N +TS+ + L ++ N+ FN+I +
Sbjct: 572 IPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTEL 631
Query: 169 ----------RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
DE L ++ +++L +N+I + +SL L +L L + N LT + D+
Sbjct: 632 NMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTA-IPDE 690
Query: 219 IRGLKRLRTVDLSYNKINKF 238
I LK ++ ++L NK+ K
Sbjct: 691 ISKLKSMKILNLDNNKMEKI 710
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ N + + SL L L L++N N L S+ ++ L +++L + N+++
Sbjct: 466 SMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSMKILNLYFNKIDK 525
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR----------- 169
+P + +L L +N +TS+ + L +++ N+D N++ +
Sbjct: 526 IPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTEL 585
Query: 170 -----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
DE L ++++++L N+I + SL L +L L + N LT + D+
Sbjct: 586 YMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRSNALTS-VPDE 644
Query: 219 IRGLKRLRTVDLSYNKINKF 238
I LK ++T++LS NKI K
Sbjct: 645 IGKLKSMKTLNLSSNKIEKI 664
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ N + + SL L L L + +N L ++ ++ L +++L ++ N++E
Sbjct: 650 SMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEK 709
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P + QL L +N +TS+ + L +++ N+D
Sbjct: 710 IPDSLCALQQLTELDIRSNALTSIPDEIGKLKSMKILNLD-------------------- 749
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NN++ + SL L KL L + HN LT + D+I LK + T++LS+NKI K
Sbjct: 750 ----NNKMEKIPDSLCALEKLTDLNMEHNALTA-IPDEIGKLKSMTTLNLSFNKIEKI 802
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
+LG+ L++L +E +L +PS+I +L L + N+I + L L KL NM
Sbjct: 926 SRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINM 985
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
N +T + DE L ++ +++L N+I + SL L +L L ++ N LT
Sbjct: 986 GSNALTSI-PDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALT 1037
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L++ N++ ++T+V E H L + L N+I + SL L KL + + N LT
Sbjct: 934 LRMLNLEHGELTIVP-SEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTS 992
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
+ D+I LK ++T++LS+NKI K
Sbjct: 993 -IPDEISKLKSMKTLNLSFNKIAKI 1016
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ LT + + + L L L+ N++ + L L KL + + N L ++
Sbjct: 934 LRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSI 993
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDS 180
P +I + +L + N+I + L L +L++ NM+ N +T + + Q+ ++D+
Sbjct: 994 PDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPSVKLQHQTLDIDN 1053
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + M+ + L KL L L+ N+L EF I L L + L N++
Sbjct: 1054 GASVFSLCFGMSERIKKL-KLIRLQLNDNKLKEFPWQIIEELHSLYKLSLCGNEL 1107
>gi|355745549|gb|EHH50174.1| hypothetical protein EGM_00958 [Macaca fascicularis]
Length = 1065
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P ++ L + N ++ + S L +L L+NNR+ +
Sbjct: 122 ITLLSLVHNIIPEINAQALQFYPALQSLDLSSNIISEIKTSSFPHMQLKYLNLSNNRITT 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLVLQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
L G L L + N I I +A F + +L + +N LT L+ S GL+ L L L
Sbjct: 283 LYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNL 342
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+NR+ + +G LS LQ L + N++ A+ + F+
Sbjct: 343 GDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFA------------------- 383
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
GLT L + NQI + + F L +L+ + L NN I S+ + T L L L+
Sbjct: 384 -GLTSLTKLVLQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELILNT 442
Query: 209 NQL 211
+ L
Sbjct: 443 SSL 445
>gi|355558286|gb|EHH15066.1| hypothetical protein EGK_01107 [Macaca mulatta]
Length = 1065
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P ++ L + N ++ + S L +L L+NNR+ +
Sbjct: 122 ITLLSLVHNIIPEINAQALQFYPALQSLDLSSNIISEIKTSSFPHMQLKYLNLSNNRITT 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLVLQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
L G L L + N I I +A F + +L + +N LT L+ S GL+ L L L
Sbjct: 283 LYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNL 342
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+NR+ + +G LS LQ L + N++ A+ + F+
Sbjct: 343 GDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFA------------------- 383
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
GLT L + NQI + + F L +L+ + L NN I S+ + T L L L+
Sbjct: 384 -GLTSLTKLVLQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELILNT 442
Query: 209 NQL 211
+ L
Sbjct: 443 SSL 445
>gi|425465644|ref|ZP_18844951.1| Small GTP-binding protein domain protein (fragment) [Microcystis
aeruginosa PCC 9809]
gi|389832091|emb|CCI24623.1| Small GTP-binding protein domain protein (fragment) [Microcystis
aeruginosa PCC 9809]
Length = 865
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 16 NLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTS 74
NL ++ PE LTS L L L NN I+ I E A +++ L + N ++
Sbjct: 27 NLTEIPPEIPQ--LTS--------LQYLNLRNNQISEIPEALAQLTSLQHLRLSNNQISE 76
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
+ +L LT L L LNNN+++ ++ L L+ LQ L + NQ+ +P + + L L
Sbjct: 77 IPEALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEALAHLTSLQYL 136
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y NNN+I+ + L LT LQ + NQI + + L +L + L NNQI + +
Sbjct: 137 YLNNNQISEIPKALAQLTSLQHLFLYNNQIREI-PEALAQLTSLQDLDLSNNQIREIPEA 195
Query: 195 LSGLTKLAYLYLSHNQLTEF 214
L+ LT L LYL +NQ+ E
Sbjct: 196 LAHLTSLQRLYLDNNQIREI 215
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + NLT + + LT L +L L NN++ + L L+ LQ L + NQ+ +P
Sbjct: 20 KLDLSNKNLTEIPPEIPQLTSLQYLNLRNNQISEIPEALAQLTSLQHLRLSNNQISEIPE 79
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L L NNN+I + L LT LQ ++ NQI + + +L +L + L
Sbjct: 80 ALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREI-PEALAHLTSLQYLYL 138
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NNQI+ + +L+ LT L +L+L +NQ+ E + + + L L+ +DLS N+I +
Sbjct: 139 NNNQISEIPKALAQLTSLQHLFLYNNQIRE-IPEALAQLTSLQDLDLSNNQIREI 192
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Query: 43 LLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L NN I+ I E A +++ L++ N + + +L LT L LFLNNN+++ +
Sbjct: 67 LRLSNNQISEIPEALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEA 126
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L L+ LQ L + NQ+ +P + + L L+ NN+I + L LT LQ ++
Sbjct: 127 LAHLTSLQYLYLNNNQISEIPKALAQLTSLQHLFLYNNQIREIPEALAQLTSLQDLDLSN 186
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
NQI + + +L +L + L NNQI + +L+ L L L L +N +T
Sbjct: 187 NQIREI-PEALAHLTSLQRLYLDNNQIREIPEALAHLVNLKGLVLGNNPIT 236
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 43 LLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L NN I I E A +++ L++ N ++ + +L LT L LFL NN+++ +
Sbjct: 113 LFLNNNQIREIPEALAHLTSLQYLYLNNNQISEIPKALAQLTSLQHLFLYNNQIREIPEA 172
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L L+ LQ L + NQ+ +P + + L LY +NN+I + L L L+ +
Sbjct: 173 LAQLTSLQDLDLSNNQIREIPEALAHLTSLQRLYLDNNQIREIPEALAHLVNLKGLVLGN 232
Query: 162 NQITMV 167
N IT V
Sbjct: 233 NPITNV 238
>gi|380789359|gb|AFE66555.1| leucine-rich repeats and immunoglobulin-like domains protein 2
precursor [Macaca mulatta]
Length = 1065
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P ++ L + N ++ + S L +L L+NNR+ +
Sbjct: 122 ITLLSLVHNIIPEINAQALQFYPALQSLDLSSNIISEIKTSSFPHMQLKYLNLSNNRITT 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLVLQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
L G L L + N I I +A F + +L + +N LT L+ S GL+ L L L
Sbjct: 283 LYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNL 342
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+NR+ + +G LS LQ L + N++ A+ + F+
Sbjct: 343 GDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFA------------------- 383
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
GLT L + NQI + + F L +L+ + L NN I S+ + T L L L+
Sbjct: 384 -GLTSLTKLVLQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELILNT 442
Query: 209 NQL 211
+ L
Sbjct: 443 SSL 445
>gi|426330878|ref|XP_004026431.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeats and
immunoglobulin-like domains protein 2, partial [Gorilla
gorilla gorilla]
Length = 1003
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P + L + N ++ + S L +L L+NNR+ +
Sbjct: 122 ITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITT 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQL 211
NL ++ L+NN+I+ + + +GLT L L L+ + L
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILNTSSL 398
>gi|326923993|ref|XP_003208217.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Meleagris
gallopavo]
Length = 582
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L ++++ LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L
Sbjct: 115 LPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRML 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ LT L + FN+IT V +D +NL L +S++ N+I + +
Sbjct: 175 DLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L ++I ++ +DL +N++
Sbjct: 234 IGELCNLITLDVAHNQL-EHLPEEIGSCTQITNLDLQHNEL 273
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++ FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE
Sbjct: 193 SLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I +Q+ +L +N + L + L+ L + +N+++ + + LD
Sbjct: 253 LPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKS-LAKCSELDE 311
Query: 181 ISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK-- 237
++L+NN I+++ LS L KL L L+ N + + + ++++ +N+INK
Sbjct: 312 LNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIP 371
Query: 238 FGTRNEGK 245
FG + K
Sbjct: 372 FGIFSRAK 379
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L + I L L + L YN+++
Sbjct: 246 AHNQLEHLPEEIGSCTQITNLDLQHNELLD-LPETIGNLSSLSRLGLRYNRLSAI 299
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+++ SL ++L+ L L NN + +L EG L +L KL L + +N +
Sbjct: 285 SLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQ 344
Query: 120 ALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+ P FS + SL +NRI + G+ L NM NQ+T + D F +
Sbjct: 345 SYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTS 403
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+T + +SGL L L LS+N L + L I L++LR +DL NK+
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKK-LPHGIGNLRKLRELDLEENKL 460
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L +G L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVF------------------------NM 159
+ S+L L NN I++L +GLL L KL NM
Sbjct: 303 LAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|40788371|dbj|BAA34526.2| KIAA0806 protein [Homo sapiens]
Length = 1073
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P + L + N ++ + S L +L L+NNR+ +
Sbjct: 130 ITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITT 189
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 190 LEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 249
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 250 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 309
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 310 ISPDAWEFCQRLSELDLSYNQLTRL 334
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 248 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 307
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 308 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 367
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 368 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 427
Query: 233 NKI 235
N I
Sbjct: 428 NAI 430
>gi|402855705|ref|XP_003892456.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2 [Papio anubis]
Length = 1065
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P ++ L + N ++ + S L +L L+NNR+ +
Sbjct: 122 ITLLSLVHNIIPEINAQALQFYPALQSLDLSSNIISEIKTSSFPHMQLKYLNLSNNRITT 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESTFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLVLQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
L G L L + N I I +A F + +L + +N LT L+ S GL+ L L L
Sbjct: 283 LYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESTFVGLSLLERLNL 342
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+NR+ + +G LS LQ L + N++ A+ + F+
Sbjct: 343 GDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFA------------------- 383
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
GLT L + NQI + + F L +L+ + L NN I S+ + T L L L+
Sbjct: 384 -GLTSLTKLVLQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELILNT 442
Query: 209 NQL 211
+ L
Sbjct: 443 SSL 445
>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++ N LTS+ + LT L L+LN N+L S+ ++G L+ L+ L + NQL +
Sbjct: 144 SLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTS 203
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L + N++TS+ + LT L ++ NQ+T V E L +L+S
Sbjct: 204 LPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPA-EIGQLTSLES 262
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+ ++ + + LT L +LYL N+LT L +I L L + L+ N++
Sbjct: 263 LFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTS-LPAEIGQLTSLMMLHLNGNQLTSL 319
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 29 LTSDDLKGTPA-------LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
L + L+ PA L+TL L N +T + E ++ +L + N LTS+ +
Sbjct: 35 LNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRLDLQVNQLTSVPAEIG 94
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT L LFL+ N+L S+ ++G L+ L L + +NQL ++P++I + L LY +NN+
Sbjct: 95 QLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAEIGQLTSLAHLYISNNQ 154
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+TS+ + LT L ++ N++T V E L +L+ + L NQ+TS+ + + L
Sbjct: 155 LTSVPAEIGQLTSLTELYLNGNKLTSVPA-EIGQLTSLEKLDLAGNQLTSLPAEIGQLMS 213
Query: 201 LAYLYLSHNQLTEF 214
L L L NQLT
Sbjct: 214 LTELNLHANQLTSV 227
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R L++ N L ++ + LT L L L+ N+L S+ ++G L+ L L ++ NQL +
Sbjct: 29 ALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRLDLQVNQLTS 88
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L+ + N++ S+ + LT L + NQ+T V E L +L
Sbjct: 89 VPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPA-EIGQLTSLAH 147
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + NNQ+TS+ + + LT L LYL+ N+LT +I L L +DL+ N++
Sbjct: 148 LYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSV-PAEIGQLTSLEKLDLAGNQLTSL 204
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 29 LTSDDLKGTPA-------LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
L+ + L PA L L + NN +T + E ++ +L++ N LTS+ +
Sbjct: 127 LSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIG 186
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT L L L N+L SL ++G L L L + NQL ++P++I + L LY N N+
Sbjct: 187 QLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQ 246
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+TS+ + LT L+ + NQ+ V E L +L + L++N++TS+ + + LT
Sbjct: 247 LTSVPAEIGQLTSLESLFLGNNQLRNVLA-EIGQLTSLKWLYLEDNKLTSLPAEIGQLTS 305
Query: 201 LAYLYLSHNQLTEF 214
L L+L+ NQLT
Sbjct: 306 LMMLHLNGNQLTSL 319
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L+ L L+LN+N+L+++ ++G L+ L L + NQL ++P++I + L L N++
Sbjct: 27 LSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRLDLQVNQL 86
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
TS+ + LT L + NQ+ V E L +L + L NQ+TS+ + + LT L
Sbjct: 87 TSVPAEIGQLTSLAGLFLSRNQLLSVPA-EIGQLTSLAHLYLSRNQLTSVPAEIGQLTSL 145
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
A+LY+S+NQLT +I L L + L+ NK+
Sbjct: 146 AHLYISNNQLTSV-PAEIGQLTSLTELYLNGNKLTSV 181
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ ++G LS L++L + NQL +P++I + L +L + N++TS+ + LT L
Sbjct: 19 AVPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVR 78
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
++ NQ+T V E L +L + L NQ+ S+ + + LT LA+LYLS NQLT
Sbjct: 79 LDLQVNQLTSVPA-EIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSV 135
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 55/86 (63%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LTS+ + LT L LFL NN+L+++ ++G L+ L+ L +E N+L +
Sbjct: 236 SLTELYLNANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTS 295
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDG 146
LP++I + L L+ N N++TSL
Sbjct: 296 LPAEIGQLTSLMMLHLNGNQLTSLPA 321
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L +G N L ++ + LT L WL+L +N+L SL ++G L+ L +L + NQL +
Sbjct: 259 SLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQLTSLMMLHLNGNQLTS 318
Query: 121 LPSDI 125
LP++I
Sbjct: 319 LPAEI 323
>gi|7662320|ref|NP_055628.1| leucine-rich repeats and immunoglobulin-like domains protein 2
precursor [Homo sapiens]
gi|54036167|sp|O94898.3|LRIG2_HUMAN RecName: Full=Leucine-rich repeats and immunoglobulin-like domains
protein 2; Short=LIG-2; Flags: Precursor
gi|109658890|gb|AAI17371.1| Leucine-rich repeats and immunoglobulin-like domains 2 [Homo
sapiens]
gi|109659068|gb|AAI17369.1| Leucine-rich repeats and immunoglobulin-like domains 2 [Homo
sapiens]
gi|119576961|gb|EAW56557.1| leucine-rich repeats and immunoglobulin-like domains 2, isoform
CRA_b [Homo sapiens]
gi|261858072|dbj|BAI45558.1| leucine-rich repeats and immunoglobulin-like domains containing
protein 2 [synthetic construct]
Length = 1065
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P + L + N ++ + S L +L L+NNR+ +
Sbjct: 122 ITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITT 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
>gi|422018638|ref|ZP_16365195.1| adenylate cyclase [Providencia alcalifaciens Dmel2]
gi|414104930|gb|EKT66495.1| adenylate cyclase [Providencia alcalifaciens Dmel2]
Length = 291
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 98/178 (55%), Gaps = 3/178 (1%)
Query: 59 PPTIRKLHVGFNN-LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ 117
PP + +NN LT L DL L L+ N+L + L L++L++L + NQ
Sbjct: 28 PPFSYHVISAYNNALTEYPCILSECVDLQVLNLSCNQLTHIPTSLQKLTQLKMLDLGHNQ 87
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+ +P I + L LY ++N + L L+ L L+ FN N++ + D +L N
Sbjct: 88 ITQIPDVIGELTHLQFLYLSDNGVEELPDSLKKLKNLRYFNATDNKLNQL-PDCLSHLIN 146
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L + L NNQIT ++ LSGLT+++ ++L +N + E + DDI LK++R +DL+ N+I
Sbjct: 147 LQELRLYNNQITDISGKLSGLTQVSEVHLMNNAIQE-IPDDIFYLKKIRILDLNNNQI 203
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 48 NNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
N +THI P +++KL +G N +T + + + LT L +L+L++N ++ L
Sbjct: 63 NQLTHI-----PTSLQKLTQLKMLDLGHNQITQIPDVIGELTHLQFLYLSDNGVEELPDS 117
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L L L+ N+L LP + L L NN+IT + G L GLT++ ++
Sbjct: 118 LKKLKNLRYFNATDNKLNQLPDCLSHLINLQELRLYNNQITDISGKLSGLTQVSEVHLMN 177
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N I + D F L + + L NNQI ++ +++ L + L L N LT+ L D I
Sbjct: 178 NAIQEIPDDIFY-LKKIRILDLNNNQIRHISPNIAQLKNITTLNLRFNSLTQ-LPDAIGE 235
Query: 222 LKRLRTVDLSYNKINKF 238
L L+ +DL N ++
Sbjct: 236 LASLQYLDLRANCLSSL 252
>gi|410929299|ref|XP_003978037.1| PREDICTED: protein LAP2-like [Takifugu rubripes]
Length = 1355
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 111/240 (46%), Gaps = 37/240 (15%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
+ +DL PA LI L ++ + I E FP I+ V N ++ L
Sbjct: 91 MPDNDLAVLPAAIANLINLRELDVSKNSIQE--FPENIKNCKVLAIVEASVNPISKLPEG 148
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-----LGS 133
L L L+LN+ L+ L G L+KLQ+L + +NQL+ LP +Q +Q LGS
Sbjct: 149 FTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKVLPKSMQKLTQLERLDLGS 208
Query: 134 ------------------LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
L+ + NR+T L G+L L +L ++ N + MV ++
Sbjct: 209 NEFTEVPEVLDQLGGIRELWMDGNRLTFLPGMLGKLKQLVYLDVSKNNLEMV-DEQICGC 267
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L + L NN +T + S+ L KL L + NQL +L D I GL L +D S+N+I
Sbjct: 268 ESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLM-YLPDSIGGLTSLDELDCSFNEI 326
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N T + L L + L+++ NRL L G LG L +L L + +N LE +
Sbjct: 201 LERLDLGSNEFTEVPEVLDQLGGIRELWMDGNRLTFLPGMLGKLKQLVYLDVSKNNLEMV 260
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
I L L +NN +T L G + L KL +D NQ+ M D L +LD +
Sbjct: 261 DEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQL-MYLPDSIGGLTSLDEL 319
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT----------------------EFLLDDI 219
N+I ++ SS+ + HN L E L +++
Sbjct: 320 DCSFNEIEALPSSIGQCVGIRTFAADHNFLVQLPPEMGNWKNATVLFLHSNKLESLPEEM 379
Query: 220 RGLKRLRTVDLSYNKI 235
+++L+ ++LS NK+
Sbjct: 380 GDMQKLKVINLSNNKL 395
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL------ 118
L V NNL ++ + G L L L+NN L L G +G+L KL L +++NQL
Sbjct: 250 LDVSKNNLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDS 309
Query: 119 -----------------EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
EALPS I + + A++N + L + V +
Sbjct: 310 IGGLTSLDELDCSFNEIEALPSSIGQCVGIRTFAADHNFLVQLPPEMGNWKNATVLFLHS 369
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
N++ + +E ++ L I+L NN++ ++ S + L+++ ++LS NQ
Sbjct: 370 NKLESL-PEEMGDMQKLKVINLSNNKLKNLPYSFTKLSQMTAMWLSENQ 417
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N+L L ++ L +L L ++ N ++ + L ++ N + L
Sbjct: 86 LHRLSMPDNDLAVLPAAIANLINLRELDVSKNSIQEFPENIKNCKVLAIVEASVNPISKL 145
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P L LY N+ + L LTKLQ+ + NQ+ ++ + Q L L+ +
Sbjct: 146 PEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKVLPKS-MQKLTQLERL 204
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L +N+ T + L L + L++ N+LT FL + LK+L +D+S N
Sbjct: 205 DLGSNEFTEVPEVLDQLGGIRELWMDGNRLT-FLPGMLGKLKQLVYLDVSKN 255
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
IR N L L + + LFL++N+L+SL ++G + KL+++ + N+L+ L
Sbjct: 339 IRTFAADHNFLVQLPPEMGNWKNATVLFLHSNKLESLPEEMGDMQKLKVINLSNNKLKNL 398
Query: 122 PSDIQLFSQLGSLYANNNRITSL 144
P SQ+ +++ + N+ L
Sbjct: 399 PYSFTKLSQMTAMWLSENQSKPL 421
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 63 LQELYLDANQIEELPKQLFNCQVLHRLSMPDNDLAVLPAAIANLINLRELDVSKNSIQEF 122
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + + F L +L + L + + + +S LTKL L
Sbjct: 123 PENIKNCKVLAIVEASVNPISKL-PEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQIL 181
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQL + L ++ L +L +DL N+ +
Sbjct: 182 ELRENQL-KVLPKSMQKLTQLERLDLGSNEFTEV 214
>gi|449109952|ref|ZP_21746584.1| hypothetical protein HMPREF9722_02280 [Treponema denticola ATCC
33520]
gi|448957660|gb|EMB38400.1| hypothetical protein HMPREF9722_02280 [Treponema denticola ATCC
33520]
Length = 467
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 38/226 (16%)
Query: 10 GHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGF 69
G + L+ E G+ PL + D G AL +KL+ F
Sbjct: 186 GDIIELDCRGEETPGGNRPLIALDASGCTAL----------------------QKLNCRF 223
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
NN+T L+ ++GL DL L+ N+N L +L+ + L+KL+ L + NQL AL ++ +
Sbjct: 224 NNITELD--VQGLKDLQELYCNSNTLTALD--VYGLTKLEKLNCKTNQLTAL--NVSDCT 277
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N+N +++LD GLT LQ N NQ+T + + L L +N+I
Sbjct: 278 ALKELICNSNELSTLDA--SGLTALQELNCSRNQLTAL---DVSGLKALQEFICNDNKIP 332
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N + GLTKL L NQLT +++GL +L+ +D + N++
Sbjct: 333 ELN--VQGLTKLQKLECGGNQLTTL---NVQGLTKLQELDCASNQL 373
>gi|421127137|ref|ZP_15587361.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136066|ref|ZP_15596177.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019800|gb|EKO86614.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410435227|gb|EKP84359.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 241
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 27 HPLTSDDLKGTPALITLLLVNN-NITHIHENAFPPTI------RKLHVGFNNLTSLNNSL 79
P+T DL T AL L V N++ FP I ++LH+ N T+L +
Sbjct: 33 EPVTYRDL--TKALQNPLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEI 90
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
L L L L NN+L +L ++ L LQ L + +NQL LP +I +L LY N N
Sbjct: 91 EQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNAN 150
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
++T++ + L LQV + +NQ + EF L NL ++L NQ+T++ + L
Sbjct: 151 QLTTIPNEIAQLQNLQVLFLSYNQFKTI-PVEFGQLKNLQELNLDANQLTTIPKEIGQLQ 209
Query: 200 KLAYLYLSHNQLTEFLLDDIRGL 222
L LYL +NQ + + IR L
Sbjct: 210 NLQTLYLRNNQFSIEEKERIRKL 232
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 2/176 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ L + + L +L L L++N+ +L ++ L KLQ L + NQL
Sbjct: 47 PLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLEKLQELNLWNNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L LY + N++ +L + L KLQ ++ NQ+T + +E L NL
Sbjct: 107 ITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTI-PNEIAQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L NQ ++ L L L L NQLT + +I L+ L+T+ L N+
Sbjct: 166 QVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTT-IPKEIGQLQNLQTLYLRNNQ 220
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 67 VGFNNLT-SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
V + +LT +L N L G+ LN L+ +LK+ ++G L LQ L + NQ LP +I
Sbjct: 35 VTYRDLTKALQNPL-GVRILN---LSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEI 90
Query: 126 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+ +L L NN++ +L + L LQ + NQ+ M E L L + L
Sbjct: 91 EQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQL-MTLPKEIGQLEKLQKLYLNA 149
Query: 186 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ+T++ + ++ L L L+LS+NQ + + LK L+ ++L N++
Sbjct: 150 NQLTTIPNEIAQLQNLQVLFLSYNQFKTIPV-EFGQLKNLQELNLDANQL 198
>gi|428164457|gb|EKX33482.1| hypothetical protein GUITHDRAFT_81382, partial [Guillardia theta
CCMP2712]
Length = 566
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 24/173 (13%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ NNL L NS+R L +L L L++N+L+SL L TL+ L+ + +E NQL +
Sbjct: 271 LQTLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRI 330
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTK--------------------LQVFN 158
P +I + L L N++TSL GLL L++ L+
Sbjct: 331 PPEIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQLSLLSPAIGMLTLLEALK 390
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+DFN I ++ E NL NL+ +S+ NNQ+ ++ L LTKL L +S+N L
Sbjct: 391 VDFNMIQIL-PPEIGNLRNLEDLSICNNQVKTLPPELFKLTKLRRLAISNNSL 442
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 47 NNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG 100
+N IT I PP I R++ + N+L++L N + L +L L ++NN++++L
Sbjct: 163 DNAITQI-----PPVIGLLVELREVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPN 217
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
L+ L L + N + ALP +I +F++L +L +N++ +L + LTKLQ ++
Sbjct: 218 NFHLLTSLTELSLSGNPITALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQ 277
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N + + + + L NL+ + L +NQ+ S+ S L L L + L +NQL + +I
Sbjct: 278 SNNLHDL-PNSIRKLKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRR-IPPEIA 335
Query: 221 GLKRLRTVDLSYNKINKFGT 240
G+ L + ++YN++ T
Sbjct: 336 GMAYLSRLQVAYNQLTSLPT 355
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P+++ L + N + + + LT L L LN N+L SL ++G L+ LQ L ++ N+
Sbjct: 14 PSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTLWVQNNKFV 73
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN--MDFNQITMVRRDEFQNLHN 177
+PS+IQ + L +L + N+ + L +T L+ + + FNQ+ + + Q L
Sbjct: 74 DVPSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQLKKLPQAIGQ-LAG 132
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG-LKRLRTVDLSYNKIN 236
L ++++NNQI+S+ + LT L L+ + N +T+ + + G L LR V LS N ++
Sbjct: 133 LIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQ--IPPVIGLLVELREVRLSNNSLS 190
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L V FN + L + L +L L + NN++K+L +L L+KL+ L I N L ++
Sbjct: 386 LEALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELFKLTKLRRLAISNNSLNSI 445
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L + L SL NRI L L LT L + N +T +E +++L +I
Sbjct: 446 SGEISLLTGLQSLVTTGNRIRILPPSLGLLTNLTELYLHDNSLTHF-PEEVGTMYSLKTI 504
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+L NN++ +++ +T L + L+ N++ + + + + +L +++L N ++ R
Sbjct: 505 TLNNNKLKEISAGFMRVTSLTSMQLADNKI-QIVPTWMWKVSKLSSLNLDGNPLSSPPER 563
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 31/207 (14%)
Query: 61 TIRKLHV--GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
+++ LH+ FN L L ++ L L L + NN++ SL Q+G L+ L+ L N +
Sbjct: 107 SLKDLHLWLSFNQLKKLPQAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAI 166
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM------------ 166
+P I L +L + +NN +++L + L +L+ + NQI
Sbjct: 167 TQIPPVIGLLVELREVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLT 226
Query: 167 -------------VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
V F L NLD L++NQ+ ++ +++ LTKL L+L N L +
Sbjct: 227 ELSLSGNPITALPVNIGIFTELKNLD---LESNQLKTLPAAIGQLTKLQTLHLQSNNLHD 283
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKFGT 240
L + IR LK L + L N++ +
Sbjct: 284 -LPNSIRKLKNLEELCLHDNQLESLPS 309
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
++ L+ L + NQ++ +P +I + + L L N N+++SL + LT LQ + N+
Sbjct: 12 SIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTLWVQNNK 71
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA--YLYLSHNQLTEF--LLDDI 219
V E Q L L ++S+ N+ + + S +T L +L+LS NQL + + +
Sbjct: 72 FVDV-PSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQLKKLPQAIGQL 130
Query: 220 RGLKRL 225
GL RL
Sbjct: 131 AGLIRL 136
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 45 LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
+ NN + + F T +R+L + N+L S++ + LT L L NR++ L LG
Sbjct: 414 ICNNQVKTLPPELFKLTKLRRLAISNNSLNSISGEISLLTGLQSLVTTGNRIRILPPSLG 473
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L+ L L + N L P ++ L ++ NNN++ + +T L + N+
Sbjct: 474 LLTNLTELYLHDNSLTHFPEEVGTMYSLKTITLNNNKLKEISAGFMRVTSLTSMQLADNK 533
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITS 190
I +V ++ + L S++L N ++S
Sbjct: 534 IQIVPTWMWK-VSKLSSLNLDGNPLSS 559
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L P DI L SL ++N+I + + LT L ++ NQ++ + E NL N
Sbjct: 3 LPIFPKDIFSIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSL-PSEMGNLTN 61
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--LLDDIRGLKRLRTVDLSYNKI 235
L ++ +QNN+ + S + LT L L +S N+ + D+ LK L + LS+N++
Sbjct: 62 LQTLWVQNNKFVDVPSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLH-LWLSFNQL 120
Query: 236 NKF 238
K
Sbjct: 121 KKL 123
>gi|441636866|ref|XP_004090031.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeats and
immunoglobulin-like domains protein 2 [Nomascus
leucogenys]
Length = 1065
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P + L + N ++ + S L +L L+NNR+ +
Sbjct: 122 ITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITT 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GL L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLEVSLNXILQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
>gi|357626131|gb|EHJ76329.1| putative leucine-rich transmembrane protein [Danaus plexippus]
Length = 1119
Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 26/233 (11%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLN 86
LT+ L P+L TL+L N ITHI ++AF P++R+L + N LT L ++ L L
Sbjct: 193 LTATSLPELPSLHTLILKKNRITHIEQSAFSGCPSLRQLRLEDNLLTELPPAIYLLPSLE 252
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD 145
L L+NN ++ + G L S+L L + N L AL P + +L +L + R S+
Sbjct: 253 DLSLSNNLVEVVGGGLRACSRLARLELRGNPLSALEPHALTHLPRLTTLVLSEARGLSVF 312
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRD----------------------EFQNLHNLDSISL 183
L G ++L +D ++T + D + Q L + +
Sbjct: 313 PSLNGSSRLNTLRLDRARLTRLPSDLCLHAPLLRALDLRSNKLEHVPDLQQCSELRVLDI 372
Query: 184 QNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+NQ++S+ + +L+GL +L L ++ N+L D RL+ +DL N+I
Sbjct: 373 SDNQVSSLGAGALTGLRRLHDLLVARNRLRRISADTFVHTPRLQLLDLEDNEI 425
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 4/211 (1%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLN-NSLRGLTDL 85
L+ L +L L L N ++ + A R L++ N ++ L SL L L
Sbjct: 145 LSKGSLSECRSLRVLRLSRNKLSEVPTAALATLTRLQALNLAGNLISELTATSLPELPSL 204
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
+ L L NR+ +E L+ L +E N L LP I L L L +NN + +
Sbjct: 205 HTLILKKNRITHIEQSAFSGCPSLRQLRLEDNLLTELPPAIYLLPSLEDLSLSNNLVEVV 264
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
G LR ++L + N ++ + +L L ++ L + S+ SL+G ++L L
Sbjct: 265 GGGLRACSRLARLELRGNPLSALEPHALTHLPRLTTLVLSEARGLSVFPSLNGSSRLNTL 324
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +LT D LR +DL NK+
Sbjct: 325 RLDRARLTRLPSDLCLHAPLLRALDLRSNKL 355
Score = 45.8 bits (107), Expect = 0.017, Method: Composition-based stats.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
L+ L L L N ++ + +A P + L + S+ SL G + LN L L+
Sbjct: 268 LRACSRLARLELRGNPLSALEPHALTHLPRLTTLVLSEARGLSVFPSLNGSSRLNTLRLD 327
Query: 92 NNRLKSLEGQLGTLSKL-QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLR 149
RL L L + L + L + N+LE +P D+Q S+L L ++N+++SL G L
Sbjct: 328 RARLTRLPSDLCLHAPLLRALDLRSNKLEHVP-DLQQCSELRVLDISDNQVSSLGAGALT 386
Query: 150 GL------------------------TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
GL +LQ+ +++ N+I + + F ++ L+ +++ N
Sbjct: 387 GLRRLHDLLVARNRLRRISADTFVHTPRLQLLDLEDNEIEHIDMEAFVPINKLEDLNVGN 446
Query: 186 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
N+ + + SGL +L +L +HN R++T+ LSY
Sbjct: 447 NRFPVLPA--SGLQRLLHLK-AHNNPALRRFHPPEAFPRIQTLVLSY 490
>gi|297279610|ref|XP_002801776.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2-like [Macaca mulatta]
Length = 1026
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P ++ L + N ++ + S L +L L+NNR+ +
Sbjct: 122 ITLLSLVHNIIPEINAQALQFYPALQSLDLSSNIISEIKTSSFPHMQLKYLNLSNNRITT 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLVLQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 1185
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L N IT I E A P + +L++ N +T + +L LT+L L L +N++ +
Sbjct: 312 LTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFSNQIAEI 371
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
L L+ L LV+ NQ+ +P + + L L N+IT + ++ LT L +
Sbjct: 372 PETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIANLTNLTELH 431
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQIT + + NL NL + +NQIT + +++ LT L L LS NQ+TE + +
Sbjct: 432 LSSNQITQI-PEALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITE-IPEA 489
Query: 219 IRGLKRLRTVDLSYNKI 235
I L +L +DL N +
Sbjct: 490 IESLSKLEKLDLRGNPL 506
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 45 LVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L +N IT I P I KL ++ N +T + ++ LT+L L L++N++ +
Sbjct: 179 LSSNQITQI-----PEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEI 233
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ + L +L + NQ+ +P I + L LY ++N+IT + L LT L +
Sbjct: 234 PEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLH 293
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ NQIT + + NL NL + L NQIT + +L+ L L LYL NQ+TE
Sbjct: 294 LSSNQITEI-PEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEI 348
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P +RKL + N L S+ + + + L L L L + + L+ L L++ NQ+
Sbjct: 80 PNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILSYNQIT 139
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P I S L L ++N+IT + + LT L N+ NQIT + + L NL
Sbjct: 140 QIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQI-PEVIAKLTNLT 198
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NQIT + +++ LT L L LS N++TE + + I L +DLS N+I K
Sbjct: 199 LLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITE-IPEAITQSTNLTVLDLSSNQITKI 256
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L L+L N IT I P I KL N +T + ++ LT+L L L++N
Sbjct: 128 LTQLILSYNQITQI-----PEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSN 182
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
++ + + L+ L LL + NQ+ +P I + L L ++N+IT + + T
Sbjct: 183 QITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTN 242
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L V ++ NQIT + + L NL + L +NQIT + +L+ LT L L+LS NQ+TE
Sbjct: 243 LTVLDLSSNQITKI-PEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITE 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
+ + + L L + LS N+I +
Sbjct: 302 -IPEALANLTNLTQLYLSGNQITEI 325
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 4/200 (2%)
Query: 41 ITLL-LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+TLL L +N IT I E T + L + N +T + ++ LT+L L+L++N++ +
Sbjct: 220 LTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEI 279
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
L L+ L L + NQ+ +P + + L LY + N+IT + L L L
Sbjct: 280 PEALANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLY 339
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQIT + + NL NL + L +NQI + +L+ LT L L L NQ+ E + +
Sbjct: 340 LYSNQITEI-PEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAE-IPET 397
Query: 219 IRGLKRLRTVDLSYNKINKF 238
+ L L +DL +N+I +
Sbjct: 398 LAKLTNLTRLDLRFNQITQI 417
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
V NNL +L L GL +L L ++ N L+S+ + + L+ L++ + +L +P I
Sbjct: 64 VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIA 123
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+ L L + N+IT + + L+ L V N+IT + + NL NL ++L +N
Sbjct: 124 NLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQI-PEAIANLTNLTRLNLSSN 182
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QIT + ++ LT L LYLS NQ+TE + + I L L +DLS NKI +
Sbjct: 183 QITQIPEVIAKLTNLTLLYLSGNQITE-IPEAIAQLTNLTLLDLSDNKITEI 233
>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 358
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N LT+ + L L+ L+L+NN+L L ++G L LQ L + NQL+ +
Sbjct: 75 LQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTI 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I+ L LY +NN++T+L + L L+ + NQ+T + E L NL +
Sbjct: 135 SKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPK-EIGKLQNLQEL 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L KL +L L NQLT + ++I L++L+ ++L N++
Sbjct: 194 YLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT-IPNEIGKLQKLQELNLDVNQL 246
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+L+ + L +L LFL+NN+L + ++G L LQ L + NQL
Sbjct: 144 LQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 203
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I +L L +N++T++ + L KLQ N+D NQ+T + ++
Sbjct: 204 PKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLF 263
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
EF L NL +SL NQ+T++ + L L L L NQLT + +I
Sbjct: 264 LSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTT-IPKEI 322
Query: 220 RGLKRLRTVDLSYNKI 235
L+ L+T+ L N++
Sbjct: 323 GQLQNLQTLYLRNNQL 338
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L L + L +L L L++N+L L ++ L LQ L + NQL
Sbjct: 26 PLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQL 85
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I+ L LY +NN++T L + L LQ N+ NQ+ + + E + L NL
Sbjct: 86 TTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISK-EIEQLKNL 144
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+T+++ + L L L+LS+NQLT F +I L+ L+ + LS N++ F
Sbjct: 145 QKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTF-PKEIGKLQNLQELYLSNNQLTTF 203
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L L +R L +L LFLN N+L + ++ L L L + NQL L
Sbjct: 52 LQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTIL 111
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN++ ++ + L LQ +D NQ+T + + E L NL S+
Sbjct: 112 PVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSK-EIGKLQNLKSL 170
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L L LYLS+NQLT F +I L++L+ + L N++
Sbjct: 171 FLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF-PKEIGKLQKLQWLGLGDNQL 223
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +++ + L +L L+L+NN+L +L ++G L L+ L + NQL
Sbjct: 121 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTF 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ + NQ+T + +E L L +
Sbjct: 181 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI-PNEIGKLQKLQEL 239
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L L L+LS+NQ + + LK L+ + L N++
Sbjct: 240 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPV-EFGQLKNLKMLSLDANQL 292
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L NN +T FP I KL +G N LT++ N + L L L L+ N+L
Sbjct: 193 LYLSNNQLT-----TFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 247
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ ++G L LQ+L + NQ + +P + L L + N++T+L + L L++
Sbjct: 248 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 307
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
N+D NQ+T + + E L NL ++ L+NNQ++
Sbjct: 308 LNLDANQLTTIPK-EIGQLQNLQTLYLRNNQLS 339
>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 875
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + NLT + + LT L L L+NN++ + L L+ LQ L ++ NQ+ +P
Sbjct: 20 KLDLSGRNLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIREIPE 79
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L LY NNN+I+ + L LT LQ ++ NQI + + +L +L + L
Sbjct: 80 ALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPK-ALAHLTSLQELDL 138
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQI + +L+ LT L L+L++NQ+ E + + + L L+ + LS N+I +
Sbjct: 139 SDNQIREIPEALAHLTSLELLFLNNNQIKE-IPEALAHLTSLQVLYLSNNQIREI 192
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 8/187 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I ++L++ N ++ + +L LT L L+L NN+++ + L L+ LQ+L
Sbjct: 31 IPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIREIPEALTHLTSLQVL 90
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ+ +P + + L L ++N+I + L LT LQ ++ NQI + +
Sbjct: 91 YLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALAHLTSLQELDLSDNQIREI-PEA 149
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+L +L+ + L NNQI + +L+ LT L LYLS+NQ+ E + + + L L+ + L
Sbjct: 150 LAHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLSNNQIRE-IPEALAQLTSLQNLHLK 208
Query: 232 YNKINKF 238
N+I +
Sbjct: 209 NNQIREI 215
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
Query: 39 ALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L L NN I I E +++ L++ N ++ + +L LT L L L++N+++
Sbjct: 63 SLQRLYLKNNQIREIPEALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIRE 122
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ L L+ LQ L + NQ+ +P + + L L+ NNN+I + L LT LQV
Sbjct: 123 IPKALAHLTSLQELDLSDNQIREIPEALAHLTSLELLFLNNNQIKEIPEALAHLTSLQVL 182
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQI + + L +L ++ L+NNQI + +L+ L L L L +N +T +
Sbjct: 183 YLSNNQIREI-PEALAQLTSLQNLHLKNNQIREIPEALAHLVNLKRLVLQNNPITNVPPE 241
Query: 218 DIR 220
IR
Sbjct: 242 IIR 244
>gi|148230653|ref|NP_001085672.1| leucine-rich repeat-containing protein 40 [Xenopus laevis]
gi|82236544|sp|Q6GPJ5.1|LRC40_XENLA RecName: Full=Leucine-rich repeat-containing protein 40
gi|49257387|gb|AAH73124.1| MGC84527 protein [Xenopus laevis]
Length = 605
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 4/201 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L+L +N + + E+ + P + L + N + SL ++R LT+L L +++N++K L
Sbjct: 84 LTKLILASNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+L L L+ +++ NQLE LP I S L L +NN + S+ + LT L FN
Sbjct: 144 PNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N++T + E + NL + +N + ++ +S++G+ L LYL N+LT L +
Sbjct: 204 LSSNKLTAL-PTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLT--YLPE 260
Query: 219 IRGLKRLRTVDLSYNKINKFG 239
+ L +L+ + + N+I G
Sbjct: 261 LPFLTKLKELHVGNNQIQTLG 281
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L L +N+L++L + L L +L I NQ+ +LP I+ + L L ++N+I
Sbjct: 82 TDLTKLILASNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L L+ L L+ F + NQ+ + D +L L+ + + NN + S++SS+ LT L
Sbjct: 142 QLPNELQHLQNLKSFLLQHNQLEEL-PDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
LS N+LT L +I +K LR +D + N
Sbjct: 201 KFNLSSNKLTA-LPTEIGKMKNLRQLDCTSN 230
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L V N L S+++S+ LT L L++N+L +L ++G + L+ L N LE +
Sbjct: 176 LEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENV 235
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ + L LY N++T L L LTKL+ ++ NQI + + QNL +L +
Sbjct: 236 PASVAGMESLEQLYLRQNKLTYLPEL-PFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVL 294
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ N++ + +S L L L LS+N + L D + L L+++ L N +
Sbjct: 295 ELRYNKLKVLPKEISLLKGLERLDLSNNDIGS-LPDTLGSLPNLKSLQLDGNPL 347
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLE 119
++ +L++ N LT L L LT L L + NN++++L + L LS L +L + N+L+
Sbjct: 244 SLEQLYLRQNKLTYLP-ELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLK 302
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
LP +I L L L +NN I SL L L L+ +D N + +RRD
Sbjct: 303 VLPKEISLLKGLERLDLSNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRD 353
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +++GFN ++S++ +L L L L + NN L SL ++ L++LQ +++ N+ +
Sbjct: 453 SVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPPEMEALTRLQSIILSFNRFKH 512
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
P + L ++ ++N+I S+D + L+ +TKL ++ N + + N +L
Sbjct: 513 FPDVLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLDLQNNDLLQI-PPALGNCESLR 571
Query: 180 SISLQNN 186
++ L+ N
Sbjct: 572 ALHLEGN 578
>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 358
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+ + L +L LFL+NN+L + ++G L LQ L + NQL
Sbjct: 144 LQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 203
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L +N++T++ + L KLQ N+D NQ+T + + E L NL +
Sbjct: 204 PKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPK-EIGQLQNLQVL 262
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ ++ L L L L NQLT L +I LK L+ ++L N++
Sbjct: 263 FLSYNQFKTIPVEFGQLKNLKMLSLDANQLTA-LPKEIGKLKNLKMLNLDANQL 315
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L L +R L +L LFLN N+ K+ ++ L L L + NQL L
Sbjct: 52 LQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTIL 111
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN++ ++ + L LQ +D NQ+T + E L NL S+
Sbjct: 112 PVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPK-EIGKLQNLKSL 170
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L L LYLS+NQLT F +I L++L+ + L N++
Sbjct: 171 FLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF-PKEIGKLQKLQWLGLGDNQL 223
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L++N+L L ++ L LQ L + NQ
Sbjct: 26 PLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQF 85
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ P +I+ L LY +NN++T L + L LQ N+ NQ+ + + E + L NL
Sbjct: 86 KTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISK-EIEQLKNL 144
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+T+ + L L L+LS+NQLT F +I L+ L+ + LS N++ F
Sbjct: 145 QKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF-PKEIGKLQNLQELYLSNNQLTTF 203
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N + + L L+ L+L+NN+L L ++G L LQ L + NQL+ +
Sbjct: 75 LQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTI 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I+ L LY +NN++T+ + L L+ + NQ+T + E L NL +
Sbjct: 135 SKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPK-EIGKLQNLQEL 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L KL +L L NQLT + ++I L++L+ ++L N++
Sbjct: 194 YLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT-IPNEIGKLQKLQELNLDVNQL 246
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +++ + L +L L+L+NN+L + ++G L L+ L + NQL
Sbjct: 121 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ + NQ+T + +E L L +
Sbjct: 181 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI-PNEIGKLQKLQEL 239
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L L L+LS+NQ + + LK L+ + L N++
Sbjct: 240 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPV-EFGQLKNLKMLSLDANQL 292
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 12/189 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L +L L NN +T FP I KL ++ N LT+ + L L WL L +N
Sbjct: 167 LKSLFLSNNQLT-----TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 221
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L ++ ++G L KLQ L ++ NQL +P +I L L+ + N+ ++ L
Sbjct: 222 QLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKN 281
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L++ ++D NQ+T + + E L NL ++L NQ+ ++ + L L LYL +NQ +
Sbjct: 282 LKMLSLDANQLTALPK-EIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSI 340
Query: 214 FLLDDIRGL 222
+ IR L
Sbjct: 341 EEKERIRKL 349
>gi|303280313|ref|XP_003059449.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459285|gb|EEH56581.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 312
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 4/194 (2%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
L L TL L N T + E+ F + +L + N LTS++ ++ L L LFL N
Sbjct: 77 LTSVATLTTLDLEVNKFTVVPESIFGLENLDRLRLAANKLTSISPNISRLDCLRELFLGN 136
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N+L SL +LG + L+ L I+ N+++ LP + S L L ++N +T + ++ L
Sbjct: 137 NKLTSLPAELGKIDTLKKLEIQDNKIKTLPDEFVGLSSLEHLKYDSNGLTKIPDVVFKLD 196
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L++ ++ N++T + E +L L + +Q N++ ++ +++ LT+L L L N+LT
Sbjct: 197 TLRILELNNNKLTELPA-ELGDLAELRDLRVQTNKLKTLPAAIGNLTELRVLKLDSNKLT 255
Query: 213 EFLLDDIRG-LKRL 225
E L D++ G LKRL
Sbjct: 256 E-LPDELGGCLKRL 268
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 74/152 (48%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T++KL + N + +L + GL+ L L ++N L + + L L++L + N+L
Sbjct: 151 TLKKLEIQDNKIKTLPDEFVGLSSLEHLKYDSNGLTKIPDVVFKLDTLRILELNNNKLTE 210
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+++ ++L L N++ +L + LT+L+V +D N++T + + L L
Sbjct: 211 LPAELGDLAELRDLRVQTNKLKTLPAAIGNLTELRVLKLDSNKLTELPDELGGCLKRLSH 270
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ + + I ++ +L L +LT
Sbjct: 271 LCMYDCPIATLPETLGQCESLYDFIFCGTKLT 302
>gi|456862201|gb|EMF80779.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
LT2116]
Length = 220
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
++L + N LT+L L L +L ++L+ NRL SL ++G L L+ L + NQL+ LP
Sbjct: 5 KQLFLDENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQNLEELHLSSNQLKTLP 64
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+I+ L L NNN +T+L + L L N+ N++T++ + E L N+ +
Sbjct: 65 KEIEKLHNLQILDLNNNELTALPEEIGQLQNLYGLNLKLNKLTILPK-EIGQLQNMGDLD 123
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
L +NQ+T++ S + L KL L LS N LT F
Sbjct: 124 LSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSF 155
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
+ K + L +++NQL LP + L +Y + NR+TSL + L L+ ++ NQ+
Sbjct: 1 MQKFKQLFLDENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQNLEELHLSSNQL 60
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
+ + E + LHNL + L NN++T++ + L L L L N+LT L +I L+
Sbjct: 61 KTLPK-EIEKLHNLQILDLNNNELTALPEEIGQLQNLYGLNLKLNKLT-ILPKEIGQLQN 118
Query: 225 LRTVDLSYNKI 235
+ +DLS N++
Sbjct: 119 MGDLDLSDNQL 129
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +LH+ N L +L + L +L L LNNN L +L ++G L L L ++ N+L L
Sbjct: 50 LEELHLSSNQLKTLPKEIEKLHNLQILDLNNNELTALPEEIGQLQNLYGLNLKLNKLTIL 109
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +G L ++N++T+L + L KL N+ N +T + E L NL +
Sbjct: 110 PKEIGQLQNMGDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPK-EIGKLQNLKLL 168
Query: 182 SLQ 184
L+
Sbjct: 169 RLR 171
>gi|58332470|ref|NP_001011310.1| leucine-rich repeat-containing protein 40 [Xenopus (Silurana)
tropicalis]
gi|82232111|sp|Q5M8G4.1|LRC40_XENTR RecName: Full=Leucine-rich repeat-containing protein 40
gi|56789102|gb|AAH88034.1| hypothetical LOC496765 [Xenopus (Silurana) tropicalis]
Length = 605
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 4/201 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L+L +N + + E+ + P + L + N + SL +++ LT+L L +++N++K L
Sbjct: 84 LTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+L L L+ L+++ NQLE LP I S L L +NN + S+ + LT L FN
Sbjct: 144 PKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N++T + E + NL + +N + ++ +S++G+ L LYL N+LT L +
Sbjct: 204 LSSNKLTAL-PTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLT--YLPE 260
Query: 219 IRGLKRLRTVDLSYNKINKFG 239
+ L +L+ + + N+I G
Sbjct: 261 LPFLTKLKELHVGNNQIQTLG 281
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L L +N+L+ L + L L +L I NQ+ +LP I+ + L L ++N+I
Sbjct: 82 TDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L L+ L L+ + NQ+ + D +L L+ + + NN + S++SS+ LT L
Sbjct: 142 QLPKELQHLQNLKSLLLQHNQLEEL-PDSIGHLSILEELDVSNNCLRSISSSVGQLTGLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
LS N+LT L +I +K L+ +D + N
Sbjct: 201 KFNLSSNKLTA-LPTEIGKMKNLKQLDCTSN 230
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L V N L S+++S+ LT L L++N+L +L ++G + L+ L N LE +
Sbjct: 176 LEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENV 235
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ + L LY N++T L L LTKL+ ++ NQI + + QNL +L +
Sbjct: 236 PASVAGMESLEQLYLRQNKLTYLPEL-PFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVL 294
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L+ N++ + +S L L L LS+N L
Sbjct: 295 ELRYNKLKVLPEEISLLNGLERLDLSNNDL 324
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLE 119
++ +L++ N LT L L LT L L + NN++++L + L LS L +L + N+L+
Sbjct: 244 SLEQLYLRQNKLTYLP-ELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLK 302
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
LP +I L + L L +NN + SL L L L+ ++ N + +RRD
Sbjct: 303 VLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRD 353
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
+ D+N F N++ S+ L L KL + + N L +LPS+++ ++L S+ + NR
Sbjct: 453 SVCDVNLGF---NKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTRLQSVILSFNR 509
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+L + L+ + NQI + + + L ++ LQNN + + +L
Sbjct: 510 FKHFPDVLYRIPTLETILISSNQIGSIDPTQLIKMTKLSTLDLQNNDLLQIPPALGNCES 569
Query: 201 LAYLYLSHN 209
L L+L N
Sbjct: 570 LRALHLEGN 578
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 113/276 (40%), Gaps = 72/276 (26%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFN-----------NLTSLN------ 76
+ G +L L L N +T++ E F +++LHVG N NL+SL+
Sbjct: 239 VAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRY 298
Query: 77 NSLRGLTD-------LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI---- 125
N L+ L + L L L+NN L SL LG+L L+ L +E N L + DI
Sbjct: 299 NKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKG 358
Query: 126 --QLFSQL-------------------------GSLYANNNRITSLDGL----------- 147
+L L N + I +L L
Sbjct: 359 TQELLKYLKGRVQVPDVKTQEDENSTATAMTLPSESVVNTHAIVTLKTLEYCEKQASLIP 418
Query: 148 -----LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
G + + N NQ+T V + ++ ++L N+I+S++ +L L KL
Sbjct: 419 EAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLT 478
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++ + +N LT L ++ + RL++V LS+N+ F
Sbjct: 479 HIDMRNNVLTS-LPSEMEAMTRLQSVILSFNRFKHF 513
>gi|350422758|ref|XP_003493273.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
impatiens]
Length = 610
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ +L + +N+T L +++R LT L +L N+L +L ++G L L+ L + +N L +
Sbjct: 130 CLERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTS 189
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ ++ L L +N+++ + ++ LT L + FN++ V D +NL NL
Sbjct: 190 LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYV-SDNIRNLTNLTM 248
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL+ N+I + + + L L +SHN L E L ++I +L T+DL +N++
Sbjct: 249 LSLRENKIRELPAGIGKLVNLITFDISHNHL-EHLPEEIGNCVQLSTLDLQHNEL 302
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N LT + + ++ L +L L L+NN LK + + L KL++L +E+N++E+LP+
Sbjct: 435 ELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPN 494
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +N++TSL + LT L ++ N + + +E L NLDS+ +
Sbjct: 495 EIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL-PEEIGTLENLDSLYV 553
Query: 184 QNN 186
+N
Sbjct: 554 NDN 556
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N LTS+ SL ++ + N++ L +G L +LS L + + +N
Sbjct: 314 SLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFT 373
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLDGLLRGLTK-LQVFNMDFNQITMVRRDEFQNLHN 177
A PS F+ + S+ +N+I + + K L NM NQ+T + D N
Sbjct: 374 AYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNMKENQLTALPLD-IGTWVN 432
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+T + + L L L LS+N L + + I L++LR +DL NKI
Sbjct: 433 MVELNLGTNQLTKIPDDIQCLQNLEVLILSNN-LLKRIPASIANLRKLRVLDLEENKI 489
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L + ++ PA I L L+ +I+H H P I L + N L + +++
Sbjct: 251 LRENKIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIG 310
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 139
L L L L NRL S+ L + +E NQ+ LP + S L ++ + N
Sbjct: 311 RLVSLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRN 370
Query: 140 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
T+ G T + N++ N+I + F NL ++++ NQ+T++ +
Sbjct: 371 AFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNMKENQLTALPLDIGTW 430
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L NQLT+ + DDI+ L+ L + LS N + +
Sbjct: 431 VNMVELNLGTNQLTK-IPDDIQCLQNLEVLILSNNLLKRI 469
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L + N L+ + + + LT+L LFL NR++ + + L+ L +L + +N++
Sbjct: 199 SLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRE 258
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ I L + ++N + L + +L ++ N++ + D L +L
Sbjct: 259 LPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP-DTIGRLVSLTR 317
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ L+ N++TS+ SL+ + + NQ+++ + L L T+ LS N + +
Sbjct: 318 LGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPS 377
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 44/260 (16%)
Query: 17 LIDLEPETG----------------SHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP 60
L+ L PE G S P T ++LK +L L L +N ++ I + +
Sbjct: 164 LVTLPPEIGCLGNLETLALSENSLTSLPNTLENLK---SLRVLDLRHNKLSEIPDVVYKL 220
Query: 61 T-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
T + L + FN + +++++R LT+L L L N+++ L +G L L I N LE
Sbjct: 221 TNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLVNLITFDISHNHLE 280
Query: 120 ALPSDIQLFSQLGSLYANNN-----------------------RITSLDGLLRGLTKLQV 156
LP +I QL +L +N R+TS+ L +
Sbjct: 281 HLPEEIGNCVQLSTLDLQHNELLDIPDTIGRLVSLTRLGLRYNRLTSIPKSLANCKLMDE 340
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFL 215
F+++ NQ++ + +L +L +I+L N T+ S + T + + L HN++ +
Sbjct: 341 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIP 400
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
K L +++ N++
Sbjct: 401 YAIFSRAKNLAKLNMKENQL 420
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 15 LNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV---GFNN 71
+N+++L T DD++ L L+L NN + I A +RKL V N
Sbjct: 431 VNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIP--ASIANLRKLRVLDLEENK 488
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
+ SL N + L DL L L +N++ SL +G L+ L L + +N L LP +I L
Sbjct: 489 IESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENL 548
Query: 132 GSLYANNN 139
SLY N+N
Sbjct: 549 DSLYVNDN 556
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 25/164 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ N LT+L + ++ L L N+L + + L L++L++ N L+ +
Sbjct: 410 LAKLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRI 469
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I AN L KL+V +++ N+I + +E L +L +
Sbjct: 470 PASI----------AN-------------LRKLRVLDLEENKIESL-PNEIGFLRDLQKL 505
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
LQ+NQ+TS+ ++ LT L YL + N L +L ++I L+ L
Sbjct: 506 ILQSNQVTSLPRAIGHLTNLTYLSVGENNLN-YLPEEIGTLENL 548
>gi|153868931|ref|ZP_01998653.1| receptor protein kinase [Beggiatoa sp. PS]
gi|152074497|gb|EDN71345.1| receptor protein kinase [Beggiatoa sp. PS]
Length = 3115
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 113/239 (47%), Gaps = 15/239 (6%)
Query: 10 GHAVALNLIDLEPETGSHPLTSDD--LKGT-PALITLLLVNNNITHIHENAFPPTI---- 62
G+ + +L DL T H L +D+ L GT P L L + + H+N F ++
Sbjct: 482 GNQLTGSLPDLSASTKLHTLAADNNQLSGTLPDLSALTQLK--TLYFHDNQFTGSVPNLS 539
Query: 63 -----RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ 117
+L + N LT L LT L +L NN+L +L L+KLQ L + NQ
Sbjct: 540 ALTNLEELRLHTNQLTGSIPELSALTKLQFLSFGNNKLTGTIPELSALTKLQDLRLYSNQ 599
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L D+ +QL L +N++T L LT LQ + NQ+T DE NL
Sbjct: 600 LTGSIPDLSALTQLQFLSLGDNQLTGTMPDLSALTNLQELRLYDNQLTGSIPDELSNLTQ 659
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L+ + L++NQ T LS LT L L LS NQLT + D+ G + L+ L YN ++
Sbjct: 660 LEILRLEDNQFTGTIPDLSALTLLTDLRLSKNQLTGS-IPDVSGAENLQYFYLQYNDLS 717
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL----GTLSKLQLLVIEQNQ 117
++ LH+ N L + LT L +L L N+L GQ+ TL+ L +L + NQ
Sbjct: 1702 LKVLHLVGNQLDGPIPDMSALTQLQFLALGFNKLS---GQIPEFVSTLTNLTMLHLPTNQ 1758
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L D+ ++L ++ + N++T L+ T+L++ + N+ + + L N
Sbjct: 1759 LTGTIPDLSALTKLQAISLHRNQLTGPIPELKEQTQLRILTLSANKFSGTIPESISTLTN 1818
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L + L NQ+T LS LTKL Y++L NQ T D+ G L+ + ++ N ++
Sbjct: 1819 LTGLYLAANQLTGTIPDLSALTKLEYIHLHLNQFTG-QFPDVSGAGNLQDISVADNSLS 1876
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 84/172 (48%), Gaps = 9/172 (5%)
Query: 71 NLTSLNNSLRG-------LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
N++ NN L G LT+L ++ L+ N+L L +KL L + NQL
Sbjct: 454 NISLYNNQLVGTLPDLSVLTELLYVSLSGNQLTGSLPDLSASTKLHTLAADNNQLSGTLP 513
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
D+ +QL +LY ++N+ T L LT L+ + NQ+T E L L +S
Sbjct: 514 DLSALTQLKTLYFHDNQFTGSVPNLSALTNLEELRLHTNQLTG-SIPELSALTKLQFLSF 572
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NN++T LS LTKL L L NQLT + D+ L +L+ + L N++
Sbjct: 573 GNNKLTGTIPELSALTKLQDLRLYSNQLTGS-IPDLSALTQLQFLSLGDNQL 623
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 47/212 (22%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA--------- 120
NNL L LT+L +L+L N+L L L++LQ L++ NQ
Sbjct: 167 NNLIGTLPDLSNLTNLQYLWLQTNQLSGTIPDLSQLTQLQSLILHSNQFTGTIPDLSASS 226
Query: 121 ---------------LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+P+ I +QL ++ N N++T L LT+LQV N++ NQ++
Sbjct: 227 NLQQLELQLNQLSGTIPTWISTLTQLENIQFNKNQLTGSIPNLSALTQLQVLNLNKNQLS 286
Query: 166 --------MVRRDEFQ--------------NLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ + F L NL ++L +NQ+T LSGLT +
Sbjct: 287 GSIPELSALTQLSHFSANTNQLTGEIPNVNTLSNLGHLALNDNQLTGNVPDLSGLTSIQL 346
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+L +NQL E + + L L ++LS N +
Sbjct: 347 LWLHNNQL-EGPIPALTALTNLDELNLSDNSL 377
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLF 128
N LT L LT+L L L N+L + L++LQ L + N+L +P +
Sbjct: 1687 NQLTGNIPDLSALTNLKVLHLVGNQLDGPIPDMSALTQLQFLALGFNKLSGQIPEFVSTL 1746
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
+ L L+ N++T L LTKLQ ++ NQ+T E + L ++L N+
Sbjct: 1747 TNLTMLHLPTNQLTGTIPDLSALTKLQAISLHRNQLTGPIP-ELKEQTQLRILTLSANKF 1805
Query: 189 T-SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ ++ S+S LT L LYL+ NQLT + D+ L +L + L N+
Sbjct: 1806 SGTIPESISTLTNLTGLYLAANQLTG-TIPDLSALTKLEYIHLHLNQ 1851
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA-LPS 123
LH+ N LT L LT L + L+ N+L +L ++L++L + N+ +P
Sbjct: 1752 LHLPTNQLTGTIPDLSALTKLQAISLHRNQLTGPIPELKEQTQLRILTLSANKFSGTIPE 1811
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------- 170
I + L LY N++T L LTKL+ ++ NQ T D
Sbjct: 1812 SISTLTNLTGLYLAANQLTGTIPDLSALTKLEYIHLHLNQFTGQFPDVSGAGNLQDISVA 1871
Query: 171 ----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
L NL+ + L +N T LS L++L L L NQLT + D+
Sbjct: 1872 DNSLSGELPSWLNTLTNLEWLHLHDNSFTGEIPELSQLSQLQILSLQDNQLTG-PIPDLA 1930
Query: 221 GLKRLRTVDLSYNK 234
L T+ L+ N+
Sbjct: 1931 QFSDLETLTLTNNQ 1944
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 137 NNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSL 195
NNN + + + L L+ N++ NQI+ +L+NL++++++NN +T S+ L
Sbjct: 2520 NNNLVGDIPDQIGALINLEELNLNDNQISGAIPTTIDHLNNLETLNVENNALTGSLPVEL 2579
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
T L + L++NQ++ + D+ L +L T+DLS N +N
Sbjct: 2580 GDATNLQTVNLANNQISG-EIPDLNALTQLETLDLSENLLN 2619
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 52 HIHENAFPPTIRKLHVGFN--NLTSLNNSLRG--------LTDLNWLFLNNNRLKSLEGQ 101
H+H N F + N +++ +NSL G LT+L WL L++N +
Sbjct: 1846 HLHLNQFTGQFPDVSGAGNLQDISVADNSLSGELPSWLNTLTNLEWLHLHDNSFTGEIPE 1905
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L LS+LQ+L ++ NQL D+ FS L +L NN+
Sbjct: 1906 LSQLSQLQILSLQDNQLTGPIPDLAQFSDLETLTLTNNQFC 1946
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 74 SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS 133
++ S+ LT+L L+L N+L L L+KL+ + + NQ D+ L
Sbjct: 1808 TIPESISTLTNLTGLYLAANQLTGTIPDLSALTKLEYIHLHLNQFTGQFPDVSGAGNLQD 1867
Query: 134 LYANNNRITS-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
+ +N ++ L L LT L+ ++ N T E L L +SLQ+NQ+T
Sbjct: 1868 ISVADNSLSGELPSWLNTLTNLEWLHLHDNSFTG-EIPELSQLSQLQILSLQDNQLTGPI 1926
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDD 218
L+ + L L L++NQ + + D
Sbjct: 1927 PDLAQFSDLETLTLTNNQFCQSIKAD 1952
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS-LDGLL 148
L N+L L L+ L++L + NQL+ D+ +QL L N+++ + +
Sbjct: 1684 LTPNQLTGNIPDLSALTNLKVLHLVGNQLDGPIPDMSALTQLQFLALGFNKLSGQIPEFV 1743
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
LT L + ++ NQ+T D L L +ISL NQ+T L T+L L LS
Sbjct: 1744 STLTNLTMLHLPTNQLTGTIPD-LSALTKLQAISLHRNQLTGPIPELKEQTQLRILTLSA 1802
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+ + + + I L L + L+ N++
Sbjct: 1803 NKFSGTIPESISTLTNLTGLYLAANQL 1829
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT +L LT L L LN N+L +L L++L NQL ++ S
Sbjct: 260 NQLTGSIPNLSALTQLQVLNLNKNQLSGSIPELSALTQLSHFSANTNQLTGEIPNVNTLS 319
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
LG L N+N++T L GLT +Q+ + NQ+ L NLD ++L +N +
Sbjct: 320 NLGHLALNDNQLTGNVPDLSGLTSIQLLWLHNNQLEGPIP-ALTALTNLDELNLSDNSLC 378
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
NNN + + Q+G L L+ L + NQ+ A+P+ I + L +L NN +T
Sbjct: 2520 NNNLVGDIPDQIGALINLEELNLNDNQISGAIPTTIDHLNNLETLNVENNALTG------ 2573
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L V E + NL +++L NNQI+ L+ LT+L L LS N
Sbjct: 2574 ---SLPV--------------ELGDATNLQTVNLANNQISGEIPDLNALTQLETLDLSEN 2616
Query: 210 QLTEFLLDDIRGLKRLRTVDLS 231
L + D+ L L+T+++S
Sbjct: 2617 -LLNGSVPDLTELTALQTLEIS 2637
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
L+NN + +L L L+ LQ L ++ NQL D+ +QL SL ++N+ T L
Sbjct: 164 LLDNNLIGTLP-DLSNLTNLQYLWLQTNQLSGTIPDLSQLTQLQSLILHSNQFTGTIPDL 222
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
+ LQ + NQ++ L L++I NQ+T +LS LT+L L L+
Sbjct: 223 SASSNLQQLELQLNQLSGTIPTWISTLTQLENIQFNKNQLTGSIPNLSALTQLQVLNLNK 282
Query: 209 NQLT 212
NQL+
Sbjct: 283 NQLS 286
>gi|345310405|ref|XP_001520129.2| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Ornithorhynchus anatinus]
Length = 604
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
L D G P+L L L N IT + AF P + +L + N L +L + GL L
Sbjct: 278 LFEDTFLGLPSLHVLRLSANVITSLRPQAFRDLPHLEELQLAHNRLGALAAGAFEGLARL 337
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY------ANN 138
L LN+N ++ + G L++L ++ + N L ALP+ Q F L +L+ A
Sbjct: 338 EVLALNDNHIREIGPGAFAGLARLAVVNLSGNCLAALPA--QTFRGLAALHSLHLERACL 395
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSG 197
R+ + G GL L+ ++ N IT + +L L + L N++T + + +
Sbjct: 396 GRVPA--GAFAGLVALRRLSLGHNGITAIEEQGLHDLTGLLELDLTGNRLTHLPTRAFRD 453
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L +L YL L+ NQL + + + L+RL +DL++N++
Sbjct: 454 LARLEYLLLAGNQLADLAPEALLPLRRLSWLDLAHNRLGAVAA 496
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRG-LTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQN 116
P R L + NNLT+L + G L+ L++L L +RL LE Q L++L L +E+N
Sbjct: 70 PCQARALWLDGNNLTALPAAAFGNLSGLDFLNLQGSRLGQLEAQAFRGLARLAHLHLERN 129
Query: 117 QLEAL-PSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQN 174
QL L P L SL NNR+ L+G GL +L N+ +N + ++ F+
Sbjct: 130 QLRGLAPGTFLHTPNLASLSLANNRLGQLEGAAFAGLCQLGELNLGWNTLAVLPDAVFRG 189
Query: 175 LHNLDSISLQNNQITSMNSSL-------------------------SGLTKLAYLYLSHN 209
L +L + L N++ + L +GL +L L+L N
Sbjct: 190 LPHLRELVLAGNRLAYLQPPLFAGLGELQELDLSTNSLRSVKAHVFAGLPRLQKLFLRGN 249
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKI 235
QL+ GL+ LR +DLS+N++
Sbjct: 250 QLSAVAPRAFLGLRALRWLDLSHNRL 275
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 77 NSLRGLT--------DLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDI-Q 126
N LRGL +L L L NNRL LEG L +L L + N L LP + +
Sbjct: 129 NQLRGLAPGTFLHTPNLASLSLANNRLGQLEGAAFAGLCQLGELNLGWNTLAVLPDAVFR 188
Query: 127 LFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
L L NR+ L L GL +LQ ++ N + V+ F L L + L+
Sbjct: 189 GLPHLRELVLAGNRLAYLQPPLFAGLGELQELDLSTNSLRSVKAHVFAGLPRLQKLFLRG 248
Query: 186 NQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ++++ + GL L +L LSHN+L D GL L + LS N I
Sbjct: 249 NQLSAVAPRAFLGLRALRWLDLSHNRLAVLFEDTFLGLPSLHVLRLSANVI 299
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 35 KGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLN 91
G P L L L N ++ + AF +R L + N L L ++ GL L+ L L+
Sbjct: 236 AGLPRLQKLFLRGNQLSAVAPRAFLGLRALRWLDLSHNRLAVLFEDTFLGLPSLHVLRLS 295
Query: 92 NNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLL 148
N + SL Q L L+ L + N+L AL + + ++L L N+N I + G
Sbjct: 296 ANVITSLRPQAFRDLPHLEELQLAHNRLGALAAGAFEGLARLEVLALNDNHIREIGPGAF 355
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLS 207
GL +L V N+ N + + F+ L L S+ L+ + + + + +GL L L L
Sbjct: 356 AGLARLAVVNLSGNCLAALPAQTFRGLAALHSLHLERACLGRVPAGAFAGLVALRRLSLG 415
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
HN +T + L L +DL+ N++ TR
Sbjct: 416 HNGITAIEEQGLHDLTGLLELDLTGNRLTHLPTR 449
>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 378
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+ + L +L LFL+NN+L + ++G L LQ L + NQL
Sbjct: 164 LQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 223
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L +N++T++ + L KLQ N+D NQ+T + + E L NL +
Sbjct: 224 PKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPK-EIGQLQNLQVL 282
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ ++ L L L L NQLT L +I LK L+ ++L N++
Sbjct: 283 FLSYNQFKTIPVEFGQLKNLKMLSLDANQLTA-LPKEIGKLKNLKMLNLDANQL 335
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N LT+ + L L+ L+L+NN+L L ++G L LQ L + NQL+ +
Sbjct: 95 LQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTI 154
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I+ L LY +NN++T+ + L L+ + NQ+T + E L NL +
Sbjct: 155 SKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPK-EIGKLQNLQEL 213
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L KL +L L NQLT + ++I L++L+ ++L N++
Sbjct: 214 YLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT-IPNEIGKLQKLQELNLDVNQL 266
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTD 84
S +++ L L L NN +T AFP I KL + N LT+ + L +
Sbjct: 155 SKEIEQLKNLQKLYLDNNQLT-----AFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 209
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+NN+L + ++G L KLQ L + NQL +P++I +L L + N++T++
Sbjct: 210 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 269
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ L LQV + +NQ + EF L NL +SL NQ+T++ + L L L
Sbjct: 270 PKEIGQLQNLQVLFLSYNQFKTIPV-EFGQLKNLKMLSLDANQLTALPKEIGKLKNLKML 328
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQLT + +I L+ L+T+ L N++
Sbjct: 329 NLDANQLTT-IPKEIGQLQNLQTLYLRNNQL 358
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L L + L +L L L++N+L L ++ L LQ L + NQL
Sbjct: 46 PLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I+ L LY +NN++T L + L LQ N+ NQ+ + + E + L NL
Sbjct: 106 TTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISK-EIEQLKNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+T+ + L L L+LS+NQLT F +I L+ L+ + LS N++ F
Sbjct: 165 QKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF-PKEIGKLQNLQELYLSNNQLTTF 223
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +++ + L +L L+L+NN+L + ++G L L+ L + NQL
Sbjct: 141 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF 200
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ + NQ+T + +E L L +
Sbjct: 201 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI-PNEIGKLQKLQEL 259
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L L L+LS+NQ + + LK L+ + L N++
Sbjct: 260 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPV-EFGQLKNLKMLSLDANQL 312
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L NN +T FP I KL +G N LT++ N + L L L L+ N+L
Sbjct: 213 LYLSNNQLT-----TFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 267
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ ++G L LQ+L + NQ + +P + L L + N++T+L + L L++
Sbjct: 268 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 327
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
N+D NQ+T + + E L NL ++ L+NNQ++
Sbjct: 328 LNLDANQLTTIPK-EIGQLQNLQTLYLRNNQLS 359
>gi|47225771|emb|CAF98251.1| unnamed protein product [Tetraodon nigroviridis]
Length = 242
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 8/182 (4%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P R L + L L + +L L+L++N L SL +L L KLQLL ++ N E
Sbjct: 29 PLDRTLDLSGRQLRRLPAAACVFGELVKLYLSDNNLSSLPAELQGLRKLQLLALDFNCFE 88
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP+ + QL LY +NR+ L G LR L +L ++ N + + + L NL
Sbjct: 89 ELPAAVCRLPQLSILYLGSNRLWRLPGELRDLKELSTLWLETNCFHVFPKVVCE-LSNLK 147
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF---LLDDIRGLKRLRTVDLSYNKIN 236
++ L NQI S+ LS L +L ++L+ NQL EF LL+ + L +D+ N+I
Sbjct: 148 TLHLGYNQIQSIPRELSQLDELRSIWLAGNQLAEFPPVLLE----MHLLAVIDVDRNRIR 203
Query: 237 KF 238
F
Sbjct: 204 HF 205
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS 133
+ N++RG+ F+ + R + L G L + + L + QL LP+ +F +L
Sbjct: 1 MGNAVRGIVA----FIPSERCQRFLVGDLEEMPLDRTLDLSGRQLRRLPAAACVFGELVK 56
Query: 134 LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
LY ++N ++SL L+GL KLQ+ +DFN + L L + L +N++ +
Sbjct: 57 LYLSDNNLSSLPAELQGLRKLQLLALDFNCFEEL-PAAVCRLPQLSILYLGSNRLWRLPG 115
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L L +L+ L+L N F + L L+T+ L YN+I
Sbjct: 116 ELRDLKELSTLWLETNCFHVF-PKVVCELSNLKTLHLGYNQIQ 157
>gi|418695383|ref|ZP_13256403.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
gi|421108072|ref|ZP_15568616.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
gi|409956837|gb|EKO15758.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
gi|410006773|gb|EKO60510.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
Length = 288
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 2/180 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKELSLSTNEITTLPPEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIEWNKLKTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELTKLPQ-EIKNLEGLIEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +NQ T++ + L L L L NQL L ++I LK L+ + L N++ K +
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LPEEIGNLKNLKELYLEENQLTKLPKQ 252
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N L +L + L +L L+L+ N+LK L ++ L KLQ + + N+L L
Sbjct: 121 LKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELTKL 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +Y +N+ T+L + L L+ + NQ+ + +E NL NL +
Sbjct: 181 PQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLP-EEIGNLKNLKEL 239
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
L+ NQ+T + ++ L +L+ L L NQ F ++ +KRL
Sbjct: 240 YLEENQLTKLPKQIAALKQLSRLSLEGNQ---FPSEEKERIKRL 280
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E+N L+ LP +I L L + N IT+L + L LQV +++ N++ + + E
Sbjct: 58 EENPLKTLPKEIGNLKNLKELSLSTNEITTLPPEIGNLKNLQVLSLNVNRLETIPK-EIG 116
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
NL NL +S++ N++ ++ + L L LYLS NQL + L +I LK+L+ + LS N
Sbjct: 117 NLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQL-KVLPQEIWNLKKLQRIHLSTN 175
Query: 234 KINKF 238
++ K
Sbjct: 176 ELTKL 180
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N LK+L ++G L L+ L + N++ LP +I L L N NR+ ++ + L
Sbjct: 60 NPLKTLPKEIGNLKNLKELSLSTNEITTLPPEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L+ ++++N++ + + E NL NL + L NQ+ + + L KL ++LS N+LT
Sbjct: 120 NLKELSIEWNKLKTLPK-EIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELT 178
Query: 213 EFLLDDIRGLKRLRTVDLSYNK 234
+ L +I+ L+ L + L N+
Sbjct: 179 K-LPQEIKNLEGLIEIYLYDNQ 199
>gi|417406607|gb|JAA49953.1| Putative protein scribble [Desmodus rotundus]
Length = 1575
Score = 77.0 bits (188), Expect = 7e-12, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 115/224 (51%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LEALP+++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEALPAELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N+L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNRL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ ++ + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEALPAELGGLALLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N+LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNRLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAILPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|327282314|ref|XP_003225888.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Anolis
carolinensis]
Length = 605
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L L++N+LK L L L L +L I NQL +LP I L L ++N++T
Sbjct: 83 TDLTKLILSSNKLKCLSDDLKLLPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLT 142
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L L L L+ + N+++ + DEF L +L+ + + NN ++++ +S + LT L
Sbjct: 143 DLPEELLQLKHLRSLLLQHNELSHL-PDEFGKLISLEELDISNNHVSAIPTSFAFLTNLV 201
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LSHNQL +FL +I +K LR +D + N
Sbjct: 202 QLNLSHNQL-KFLPAEISAMKSLRQLDCTKN 231
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 31 SDDLKGTPALITLLLVNNNITHIH------ENAFPPTIRKLHVGFNNLTSLNNSLRGLTD 84
SDDLK PAL L + +N +T + EN ++KL+V N LT L L L
Sbjct: 99 SDDLKLLPALTVLDIHDNQLTSLPLAIGSLEN-----LQKLNVSHNKLTDLPEELLQLKH 153
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L L +N L L + G L L+ L I N + A+P+ + L L ++N++ L
Sbjct: 154 LRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTSFAFLTNLVQLNLSHNQLKFL 213
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ + L+ + N + + E N+ +L+ + L+ N++ + L T L L
Sbjct: 214 PAEISAMKSLRQLDCTKNYLETI-PPELANMASLEQLYLRRNKLRYL-PDLPSCTVLKEL 271
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ NQ+ + ++ L L +DL NK+
Sbjct: 272 HVGENQIEMLKAEHLKHLNSLCVLDLRENKL 302
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPP------TIRKLHVGFNNLTSLNNSLR 80
L+ + LK PA I+ + L + T + PP ++ +L++ N L L + L
Sbjct: 205 LSHNQLKFLPAEISAMKSLRQLDCTKNYLETIPPELANMASLEQLYLRRNKLRYLPD-LP 263
Query: 81 GLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
T L L + N+++ L+ + L L+ L +L + +N+L+++P +I L + L +NN
Sbjct: 264 SCTVLKELHVGENQIEMLKAEHLKHLNSLCVLDLRENKLKSVPDEIALLEGIERLDLSNN 323
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
I+SL L L++L+ ++ N + +RRD Q
Sbjct: 324 DISSLPCKLGNLSQLKFLALEGNPLRTIRRDILQ 357
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 23/149 (15%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+ ++ FN L S++ L L L L + NN L SL ++ L KLQ++ + N+ +
Sbjct: 453 TVCDINFSFNKLFSVSLELCMLYRLTHLDVRNNCLTSLPDEMEALGKLQIINLAFNRFKV 512
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P + L ++ NN++ SLD L + + L L +
Sbjct: 513 FPDILYRIPTLEAILLGNNQVGSLDPL-----------------------QIKKLDQLST 549
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+ LQNN I + L T L L L N
Sbjct: 550 LDLQNNDILHVPPELGNCTSLRTLLLEGN 578
>gi|320168780|gb|EFW45679.1| hypothetical protein CAOG_03663 [Capsaspora owczarzaki ATCC 30864]
Length = 862
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 106/195 (54%), Gaps = 6/195 (3%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEG-QLGTLS 106
++T I N P T + L++ N +T ++ N+ GL+ + L++++N++ ++ L+
Sbjct: 51 DLTEIPTN-IPTTTQALYLYDNKITRISANAFAGLSQVTTLWIHDNQITTIPSNAFAGLT 109
Query: 107 KLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQI 164
LQ L + N + +L ++ S L + + NRIT++ GL+KL F + +NQI
Sbjct: 110 SLQTLWLYNNNITSLAANAFSGLSLLTEMDMHGNRITTIPTTAFPGLSKLNTFYLHYNQI 169
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
T + F++L L + SL NN+ITS+ +L+GL L L L++N+LT GL
Sbjct: 170 TSIAIQAFKDLTRLATFSLNNNRITSLPEGALTGLQSLKLLDLAYNELTSLSAYATSGLS 229
Query: 224 RLRTVDLSYNKINKF 238
+ ++ L YNK+
Sbjct: 230 VVTSIHLQYNKLTSI 244
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 119/224 (53%), Gaps = 14/224 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
++++ G + TL + +N IT I NAF +++ L + NN+TSL N+ GL+ L
Sbjct: 76 ISANAFAGLSQVTTLWIHDNQITTIPSNAFAGLTSLQTLWLYNNNITSLAANAFSGLSLL 135
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLF---SQLGSLYANNNRI 141
+ ++ NR+ ++ LSKL + NQ+ ++ IQ F ++L + NNNRI
Sbjct: 136 TEMDMHGNRITTIPTTAFPGLSKLNTFYLHYNQITSI--AIQAFKDLTRLATFSLNNNRI 193
Query: 142 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLT 199
TSL +G L GL L++ ++ +N++T + L + SI LQ N++TS++S +
Sbjct: 194 TSLPEGALTGLQSLKLLDLAYNELTSLSAYATSGLSVVTSIHLQYNKLTSIDSLAFVYRD 253
Query: 200 KLAYLYLSH---NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
KL YL L + NQ+T F + L L ++L N+I T
Sbjct: 254 KLEYLLLDNNRLNQITSFSANVFATLTSLIDLNLGANEITSIPT 297
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 118/299 (39%), Gaps = 83/299 (27%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP-----------------------PTIRKL 65
+ S+ G +L TL L NNNIT + NAF P + KL
Sbjct: 100 IPSNAFAGLTSLQTLWLYNNNITSLAANAFSGLSLLTEMDMHGNRITTIPTTAFPGLSKL 159
Query: 66 ---HVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEA 120
++ +N +TS+ + + LT L LNNNR+ SL EG L L L+LL + N+L +
Sbjct: 160 NTFYLHYNQITSIAIQAFKDLTRLATFSLNNNRITSLPEGALTGLQSLKLLDLAYNELTS 219
Query: 121 LPS-DIQLFSQLGSLYANNNRITSLDGL----------------------------LRGL 151
L + S + S++ N++TS+D L L
Sbjct: 220 LSAYATSGLSVVTSIHLQYNKLTSIDSLAFVYRDKLEYLLLDNNRLNQITSFSANVFATL 279
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-------------------- 191
T L N+ N+IT + F L +L ++ + +N +TS+
Sbjct: 280 TSLIDLNLGANEITSIPTATFAGLTSLQTLYVHDNLLTSVPVAAMTSFASQLRHLFLVGN 339
Query: 192 ------NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
++ +GL +L L L+ NQ+T + + L + Y + N F T G
Sbjct: 340 KISAVSSTDFAGLPRLKSLGLTSNQITSLPANAFQALTTNTDLYALYMESNPFTTLPPG 398
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 12/174 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTD-LNWLFLNNNRLKSLEG----QLGTLSKLQLLVIEQN 116
+ +H+ +N LTS+++ D L +L L+NNRL + TL+ L L + N
Sbjct: 231 VTSIHLQYNKLTSIDSLAFVYRDKLEYLLLDNNRLNQITSFSANVFATLTSLIDLNLGAN 290
Query: 117 QLEALP-SDIQLFSQLGSLYANNNRITSLD--GLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
++ ++P + + L +LY ++N +TS+ + ++L+ + N+I+ V +F
Sbjct: 291 EITSIPTATFAGLTSLQTLYVHDNLLTSVPVAAMTSFASQLRHLFLVGNKISAVSSTDFA 350
Query: 174 NLHNLDSISLQNNQITSMNS----SLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
L L S+ L +NQITS+ + +L+ T L LY+ N T +GL
Sbjct: 351 GLPRLKSLGLTSNQITSLPANAFQALTTNTDLYALYMESNPFTTLPPGLFKGLS 404
>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
Length = 591
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT+L +R L L L L N+L +L ++G L LQ L + NQ L
Sbjct: 142 LQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATL 201
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR------------ 169
P +I L +L ++N +T+L +R L KLQ ++ NQ+T + +
Sbjct: 202 PKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLY 261
Query: 170 ----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+E L NL + L N+ T++ + L L LYL NQLT F +I
Sbjct: 262 LLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAF-PKEI 320
Query: 220 RGLKRLRTVDLSYNKI 235
L+ L+ ++LSYN++
Sbjct: 321 EQLQNLQILNLSYNRL 336
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N +L + L +L L L++N L +L ++ L KLQ L + +NQL L
Sbjct: 119 LRALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +LY N+ +L + L LQ N+D N++T + + E + L L +
Sbjct: 179 PKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPK-EMRQLQKLQKL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L+ NQ+T++ + L L LYL NQLT L ++I L+ L+ + L N+
Sbjct: 238 DLRENQLTTLPKEIGQLKSLQTLYLLANQLT-ILPEEIGKLRNLQKLYLCENR 289
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ N +L + L +L L L++N L +L ++ L KLQ L + +NQL
Sbjct: 187 SLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTT 246
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L +LY N++T L + L LQ + N+ T + +D Q L NL S
Sbjct: 247 LPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQ-LQNLQS 305
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NQ+T+ + L L L LS+N+LT L ++I L+ L+ ++LSYN++ K
Sbjct: 306 LYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTT-LPEEIGQLQNLQILNLSYNQLTKL 362
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ N LT L + L +L L+L NR +L +G L LQ L + NQL A
Sbjct: 256 SLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTA 315
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P +I+ L L + NR+T+L + L LQ+ N+ +NQ+T + + E L NL +
Sbjct: 316 FPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPK-ELGKLRNLKT 374
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L QIT+ + L L L S QLT L +I ++ L+ ++L N++
Sbjct: 375 LDLHAIQITTFPKEILQLQNLEKLNWSRTQLTT-LPGEIGQMQNLKELNLEKNQL 428
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L L L+L N+L L ++G L LQ L + +N+ L
Sbjct: 234 LQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTL 293
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI L SLY N++T+ + L LQ+ N+ +N++T + +E L NL +
Sbjct: 294 PKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTL-PEEIGQLQNLQIL 352
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+L NQ+T + L L L L L Q+T F
Sbjct: 353 NLSYNQLTKLPKELGKLRNLKTLDLHAIQITTF 385
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L + L +L L L N+L L ++G L KL+ L + NQ LP +I
Sbjct: 81 NKLTVLPKEILQLQNLQMLGLCCNQLTILSEEIGQLQKLRALDLRANQFATLPKEILQLQ 140
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L +L ++N +T+L +R L KLQ ++ NQ+T + + E L +L ++ L+ NQ
Sbjct: 141 NLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPK-EIGQLKSLQTLYLRANQFA 199
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ + L L L L N+LT L ++R L++L+ +DL N++
Sbjct: 200 TLPKEILQLQNLQALNLDSNELTA-LPKEMRQLQKLQKLDLRENQL 244
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ F L++L + L +L L L +N+L L ++ L LQ+L + NQL
Sbjct: 47 PLKVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L +I +L +L N+ +L + L LQ N+D N++T + + E + L L
Sbjct: 107 TILSEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPK-EMRQLQKL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L+ NQ+T++ + L L LYL NQ L +I L+ L+ ++L N++
Sbjct: 166 QKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFAT-LPKEILQLQNLQALNLDSNEL 221
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 31/210 (14%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I +L + +N LT+L + L +L L L+ N+L L +LG L L+
Sbjct: 315 AFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKT 374
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + Q+ P +I L L + ++T+L G + + L+ N++ NQ+T + +
Sbjct: 375 LDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEKNQLTALPK- 433
Query: 171 EFQNLHNLDSISL--QNNQITSMNSSLSGLTKLAYLYLSHNQLT---------------- 212
E L NL+ ++L +NQ +S+ + L+ L L+L HN L
Sbjct: 434 EIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLT 493
Query: 213 ------EFLLDDIRGLKRLRTVDLSYNKIN 236
E L ++I L LR +DLSYN ++
Sbjct: 494 LFRNSLETLPEEIGQLWNLRELDLSYNPLS 523
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 5/168 (2%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ + L L+ +L +L ++G L LQ L + N+L LP +I L
Sbjct: 38 TDLTKALQNPLKVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQ 97
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L N++T L + L KL+ ++ NQ + ++ Q L NL +++L +N++T++
Sbjct: 98 MLGLCCNQLTILSEEIGQLQKLRALDLRANQFATLPKEILQ-LQNLQTLNLDSNELTALP 156
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ L KL L L NQLT L +I LK L+T+ Y + N+F T
Sbjct: 157 KEMRQLQKLQKLDLRENQLTT-LPKEIGQLKSLQTL---YLRANQFAT 200
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN--RLKSLEGQLGTLSKLQLLVIEQNQLE 119
+++L++ N LT+L + L +L L LN+N + SL ++G LS L+ L ++ N L
Sbjct: 418 LKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLA 477
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP +I S+L +L N + +L + L L+ ++ +N ++ + + E L NL
Sbjct: 478 NLPKEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPK-EIGQLKNLR 536
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ L+ + + + L L L L+ + F ++ LKRL
Sbjct: 537 ILHLRKTPLARLPDEIGELQDLEELILNPD---TFEKEEREKLKRL 579
>gi|260793228|ref|XP_002591614.1| hypothetical protein BRAFLDRAFT_80710 [Branchiostoma floridae]
gi|229276823|gb|EEN47625.1| hypothetical protein BRAFLDRAFT_80710 [Branchiostoma floridae]
Length = 1504
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 38 PALITLLLVN-NNITHIHENAFPP--TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNN 93
P IT L+++ N IT + + F + +L N ++ +NN + LT L +L+L+NN
Sbjct: 48 PTTITRLVLHLNAITALSRSDFSRYRNLGRLDASSNQISIINNGTFHDLTSLTYLYLSNN 107
Query: 94 RLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSL-DGLL 148
+L +L + L LQ+L + NQL++LP+DI F LGSL + ++N+++SL DG+
Sbjct: 108 QLTNLTADMFEGLRNLQVLWLHHNQLKSLPADI--FEGLGSLRNLFLSHNQLSSLPDGIF 165
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLS 207
GL L +D NQ++ + F+ L L + L +NQ++S+ +++ GL L L L
Sbjct: 166 EGLGSLGDLRLDQNQLSNLSASIFEGLGRLGGVFLSDNQLSSLPATIFKGLDSLQDLRLD 225
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NQL GL LR + L+ N+++
Sbjct: 226 RNQLRNLPPGIFEGLGSLRVLILNQNRLS 254
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 11/193 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSL-RGLTDL 85
L +D +G +L L L +N ++ + + F ++ L + N L++L+ S+ GL L
Sbjct: 136 LPADIFEGLGSLRNLFLSHNQLSSLPDGIFEGLGSLGDLRLDQNQLSNLSASIFEGLGRL 195
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRI 141
+FL++N+L SL + L LQ L +++NQL LP I F LGSL N NR+
Sbjct: 196 GGVFLSDNQLSSLPATIFKGLDSLQDLRLDRNQLRNLPPGI--FEGLGSLRVLILNQNRL 253
Query: 142 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 199
+++ + GL LQ + NQ++ + + FQ L +L + LQ NQ+T++ + + G +
Sbjct: 254 SNIPADMFEGLGNLQELYLATNQLSSLPANLFQGLGSLQRLWLQQNQLTALPAGIFEGFS 313
Query: 200 KLAYLYLSHNQLT 212
L YLYL NQ +
Sbjct: 314 NLQYLYLHENQFS 326
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 37/234 (15%)
Query: 38 PALITLL-LVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNN-SLRGLTDLNWLFLNNN 93
PA IT L L N I + + F R L++G N +T +NN + + LT L L+L++N
Sbjct: 736 PATITSLHLSRNAIATLSRSDFSKYTRLNSLYLGSNQITMINNGTFQDLTSLTNLYLSSN 795
Query: 94 RLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSL-DGLL 148
+L +L G L KL L +E NQL LP+ I F LG L+ N+N++T+L G+
Sbjct: 796 QLSNLTSGTFDGLGKLWSLHLEGNQLTTLPAGI--FEGLGKLFTLKLNSNQLTNLTGGMF 853
Query: 149 RGLTKLQVFNMDFNQIT---------------------MVRRDEFQNLH----NLDSISL 183
GL LQ + +N+ + + D FQ L NL +SL
Sbjct: 854 EGLGGLQQLYLSYNRFSGLPAEMFVELKDLRTLYLGHNALSTDIFQQLSKDTDNLGRLSL 913
Query: 184 QNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
Q Q+T++ + + GL+ L +L LS N LT D L L + LS N+++
Sbjct: 914 QGTQLTNLTADMFEGLSSLYWLDLSQNLLTSLPADTFESLGGLYYLQLSRNQLS 967
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQL-F 128
NLT+ + GL+ L WL L+ N L SL +L L L + +NQL +LP DI L
Sbjct: 920 NLTA--DMFEGLSSLYWLDLSQNLLTSLPADTFESLGGLYYLQLSRNQLSSLPVDIFLAL 977
Query: 129 SQLGSLYANNNRITSLD-GLLRGL-TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
S+L SL + N+ TSL G+ G + L + NQ+ + D F+ L L + L N
Sbjct: 978 SRLESLDLSFNQFTSLQAGIFAGFGSSLVELYLSGNQLVSLPADLFEGLERLWYLDLDQN 1037
Query: 187 QITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+++S+ S+ GL L L+L+ NQLT D RGL + + L +N
Sbjct: 1038 ELSSLPGSIFQGLASLEALWLASNQLTSLPGDIFRGLGNMWYLTLYWNP 1086
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYA 136
GL +L L+L N+L SL L L LQ L ++QNQL ALP+ I + FS L LY
Sbjct: 261 FEGLGNLQELYLATNQLSSLPANLFQGLGSLQRLWLQQNQLTALPAGIFEGFSNLQYLYL 320
Query: 137 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+ N+ + L GL L + + NQ++ ++ D F+ L NL + L NQ+T + + +
Sbjct: 321 HENQFSILPTDTFLGLDSLLLLYLGRNQLSSLQPDMFEGLDNLQQLYLYQNQLTVLPAGI 380
Query: 196 -SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
GL L YL+L NQL GL L+ + LS N
Sbjct: 381 FEGLNSLHYLWLDQNQLPSLPAGIFEGLGSLQYLYLSNNP 420
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDL 85
L++ +G L + L +N ++ + F +++ L + N L +L + GL L
Sbjct: 184 LSASIFEGLGRLGGVFLSDNQLSSLPATIFKGLDSLQDLRLDRNQLRNLPPGIFEGLGSL 243
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRI 141
L LN NRL ++ + L LQ L + NQL +LP++ LF LGSL + N++
Sbjct: 244 RVLILNQNRLSNIPADMFEGLGNLQELYLATNQLSSLPAN--LFQGLGSLQRLWLQQNQL 301
Query: 142 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 199
T+L G+ G + LQ + NQ +++ D F L +L + L NQ++S+ + GL
Sbjct: 302 TALPAGIFEGFSNLQYLYLHENQFSILPTDTFLGLDSLLLLYLGRNQLSSLQPDMFEGLD 361
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LYL NQLT GL L + L N++
Sbjct: 362 NLQQLYLYQNQLTVLPAGIFEGLNSLHYLWLDQNQL 397
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSL-RGLTDLNWLFL 90
+G L TL L +N +T++ F +++L++ +N + L + L DL L+L
Sbjct: 829 FEGLGKLFTLKLNSNQLTNLTGGMFEGLGGLQQLYLSYNRFSGLPAEMFVELKDLRTLYL 888
Query: 91 NNNRLKSLEGQLGTLSK----LQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITS 143
+N L + Q LSK L L ++ QL L +D +F L SLY + N +TS
Sbjct: 889 GHNALSTDIFQ--QLSKDTDNLGRLSLQGTQLTNLTAD--MFEGLSSLYWLDLSQNLLTS 944
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGL-TK 200
L L L + NQ++ + D F L L+S+ L NQ TS+ + + +G +
Sbjct: 945 LPADTFESLGGLYYLQLSRNQLSSLPVDIFLALSRLESLDLSFNQFTSLQAGIFAGFGSS 1004
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L LYLS NQL D GL+RL +DL N+++
Sbjct: 1005 LVELYLSGNQLVSLPADLFEGLERLWYLDLDQNELS 1040
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L ++P D+ + + SL+ + N I +L T+L + NQITM+ FQ+L
Sbjct: 728 LTSVPQDLP--ATITSLHLSRNAIATLSRSDFSKYTRLNSLYLGSNQITMINNGTFQDLT 785
Query: 177 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L ++ L +NQ++++ S + GL KL L+L NQLT GL +L T+ L+ N++
Sbjct: 786 SLTNLYLSSNQLSNLTSGTFDGLGKLWSLHLEGNQLTTLPAGIFEGLGKLFTLKLNSNQL 845
>gi|449128329|ref|ZP_21764576.1| hypothetical protein HMPREF9733_01979 [Treponema denticola SP33]
gi|448941662|gb|EMB22563.1| hypothetical protein HMPREF9733_01979 [Treponema denticola SP33]
Length = 552
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 17/208 (8%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LT+ D++G AL +L +N +T ++ ++ L N LT LN ++GLT L L
Sbjct: 290 LTALDVQGLTALQSLDCRDNQLTALNVQGLTA-LKWLSCMGNQLTELN--VQGLTALQGL 346
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+ +++L L Q + LQ+L ++ NQL AL + Q + L L NNR+T+L+ +
Sbjct: 347 YCWDSQLTELNAQ--GCTALQILYLDGNQLTAL--NAQGCTALQMLNCYNNRLTALN--V 400
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
+G T L+ + NQ+T + Q L L+ +S +NQ+TS+N + GLT L LY +
Sbjct: 401 QGCTALRWLSCWDNQLTELN---VQGLTALERLSCWDNQLTSLN--VQGLTALERLYCWN 455
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NQLT +++GL LR ++ N++N
Sbjct: 456 NQLTAL---NVQGLNALRELNCWGNQLN 480
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 66 HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
H +N L +LN ++GL+ L L+ N L +L Q L+ L+ L NQL L ++
Sbjct: 200 HGVWNKLAALN--VQGLSSLQELYCGRNLLSTLNIQ--GLTALKRLNCWGNQLTEL--NV 253
Query: 126 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
Q + L L + N++T+L+ ++GLT L+ NQ+T + + Q L L S+ ++
Sbjct: 254 QGLTALEELSCHGNQLTALN--VQGLTALKNLGCIRNQLTAL---DVQGLTALQSLDCRD 308
Query: 186 NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
NQ+T++N + GLT L +L NQLTE + + L+ L D ++N G
Sbjct: 309 NQLTALN--VQGLTALKWLSCMGNQLTELNVQGLTALQGLYCWDSQLTELNAQGC 361
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 95/175 (54%), Gaps = 16/175 (9%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++L+ N LT LN ++GLT L L + N+L +L Q L+ L+ L +NQL A
Sbjct: 237 ALKRLNCWGNQLTELN--VQGLTALEELSCHGNQLTALNVQ--GLTALKNLGCIRNQLTA 292
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
L D+Q + L SL +N++T+L+ ++GLT L+ + NQ+T + Q L L
Sbjct: 293 L--DVQGLTALQSLDCRDNQLTALN--VQGLTALKWLSCMGNQLTELN---VQGLTALQG 345
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++Q+T +N+ G T L LYL NQLT + +G L+ ++ N++
Sbjct: 346 LYCWDSQLTELNAQ--GCTALQILYLDGNQLTAL---NAQGCTALQMLNCYNNRL 395
>gi|383865861|ref|XP_003708391.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Megachile
rotundata]
Length = 610
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 99/175 (56%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ +L + +++T+L +++R LT L +L N+L +L ++G L+ L+ L + +N L +
Sbjct: 130 CVTRLDLSKSSITNLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLANLETLALSENSLTS 189
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ ++ L L +N+++ + ++ LT L + FN++ V D +NL NL
Sbjct: 190 LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFNRVRYV-SDNIRNLTNLTM 248
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL+ N+I + + + L L +SHN L E L ++I +L T+DL +N++
Sbjct: 249 LSLRENKIKELPAGIGKLVNLITFDVSHNHL-EHLPEEIGNCVQLSTLDLQHNEL 302
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N LT + + ++ L L L L+NN LK + + L KL++L +E+N++E+LP+
Sbjct: 435 ELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIANLRKLRVLDLEENKIESLPN 494
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +N++TSL + LT L ++ N + + +E L NLDS+ +
Sbjct: 495 EIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL-PEEIGTLENLDSLYV 553
Query: 184 QNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+N + ++ L+ T L+ + + + L++ + + G
Sbjct: 554 NDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAG 592
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L + +K PA I L L+ +++H H P I L + N L + +++
Sbjct: 251 LRENKIKELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIG 310
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 139
L L L L NRL ++ L + +E NQ+ LP + S L ++ + N
Sbjct: 311 NLISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRN 370
Query: 140 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
T+ G T + N++ N+I + F NL ++++ NQ+T++ +
Sbjct: 371 AFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDIGTW 430
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L NQLT+ + DDI+ L+ L + LS N + +
Sbjct: 431 VNMVELNLGTNQLTK-IPDDIQCLQSLEILILSNNLLKRI 469
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 15 LNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV---GFNN 71
+N+++L T DD++ +L L+L NN + I A +RKL V N
Sbjct: 431 VNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIP--ASIANLRKLRVLDLEENK 488
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
+ SL N + L DL L L +N++ SL +G L+ L L + +N L LP +I L
Sbjct: 489 IESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENL 548
Query: 132 GSLYANNN 139
SLY N+N
Sbjct: 549 DSLYVNDN 556
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L + N L+ + + + LT L LFL NR++ + + L+ L +L + +N+++
Sbjct: 199 SLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKE 258
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ I L + ++N + L + +L ++ N++ + D NL +L
Sbjct: 259 LPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDI-PDTIGNLISLTR 317
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ L+ N+++++ SL+ + + NQ+++ + L L T+ LS N + +
Sbjct: 318 LGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPS 377
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 44/236 (18%)
Query: 17 LIDLEPETG----------------SHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP 60
L+ L PE G S P T ++LK +L L L +N ++ I + +
Sbjct: 164 LVTLPPEIGCLANLETLALSENSLTSLPNTLENLK---SLRVLDLRHNKLSEIPDVVYKL 220
Query: 61 T-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
T + L + FN + +++++R LT+L L L N++K L +G L L + N LE
Sbjct: 221 TSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPAGIGKLVNLITFDVSHNHLE 280
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQV-------------------- 156
LP +I QL +L +N + + G L LT+L +
Sbjct: 281 HLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLSNIPKSLANCKLMDE 340
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQL 211
F+++ NQ++ + +L +L +I+L N T+ S + T + + L HN++
Sbjct: 341 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKI 396
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 25/162 (15%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL++ N LT+L + ++ L L N+L + + L L++L++ N L+ +P+
Sbjct: 412 KLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPA 471
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I AN L KL+V +++ N+I + +E L +L + L
Sbjct: 472 SI----------AN-------------LRKLRVLDLEENKIESL-PNEIGFLRDLQKLIL 507
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
Q+NQ+TS+ ++ LT L YL + N L +L ++I L+ L
Sbjct: 508 QSNQVTSLPRAIGHLTNLTYLSVGENNLN-YLPEEIGTLENL 548
>gi|301780906|ref|XP_002925869.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Ailuropoda melanoleuca]
gi|281346252|gb|EFB21836.1| hypothetical protein PANDA_015445 [Ailuropoda melanoleuca]
Length = 603
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 83 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQ 142
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + + NN++T++ +S S L+ L
Sbjct: 143 ILPEEITNLRNLKGLYLQHNELTCI-PEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLV 201
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL L +I G+KRL+ +D + N
Sbjct: 202 RLNLSSNQLKS-LPAEISGMKRLKHLDCNSN 231
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 4/201 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+L+ L
Sbjct: 85 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQIL 144
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L +P + L L +NNR+T++ L+ L N
Sbjct: 145 PEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLN 204
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+ + E + L + +N + ++ L+ + L LYL N+L L +
Sbjct: 205 LSSNQLKSLPA-EISGMKRLKHLDCNSNLLEAVPPELANMESLELLYLRRNKLR--FLPE 261
Query: 219 IRGLKRLRTVDLSYNKINKFG 239
+ L+ + + N+I G
Sbjct: 262 FPSCRLLKELYVGENQIEILG 282
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L SL + G+ L L N+N L+++ +L + L+LL + +N+L
Sbjct: 199 SLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLEAVPPELANMESLELLYLRRNKLRF 258
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP + L LY N+I L L+ L + V ++ N++ V DE L +L+
Sbjct: 259 LP-EFPSCRLLKELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLE 316
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I+S+ SL G L +L L N L
Sbjct: 317 RLDLSNNDISSLPCSL-GKLHLKFLALEGNPL 347
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 452 VSDVNLSF---NKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIKLQTINLSFNRF 508
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 509 KILPEVLYHIPTLETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNL 568
Query: 202 AYLYLSHN 209
L L N
Sbjct: 569 RTLLLDGN 576
>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 559
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N LT+ N + L L WL+L +N+L +L ++GTL KLQ L ++ N L L
Sbjct: 86 LEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATL 145
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS+I +L LY NN + +L + L L+ ++ NQ+T + + E L NL +
Sbjct: 146 PSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQ-EIGQLENLQDL 204
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ NN +T++ + + L L L LS+N L L ++I L+ L ++LS N++
Sbjct: 205 DVSNNHLTTLPNEIGKLRSLKRLNLSNNLLI-TLPNEIGKLQNLEELNLSNNQL 257
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 95/163 (58%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
+L N + L +L +L L NN+LK+L ++G L LQ L +E NQL+ LP++I L
Sbjct: 350 ATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQ 409
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L NN++ +L + L LQ N++ NQ+ + +E L NL ++L+NNQ+ ++
Sbjct: 410 YLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTL-PNEIGQLENLQYLNLENNQLKTLP 468
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L YL L +NQL + L ++I L+ L+ ++L N++
Sbjct: 469 NEIGRLENLQYLNLENNQL-KTLPNEIGRLQNLKVLNLGGNQL 510
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N L +L N + L L WL L+NNRL +L ++G L L+ L + N+L
Sbjct: 37 PMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRL 96
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P++I +L LY +N++ +L + L KLQ + N + + E L L
Sbjct: 97 TTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATL-PSEIGRLQRL 155
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NN + ++ + L L LYL NQLT L +I L+ L+ +D+S N +
Sbjct: 156 KRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLT-TLPQEIGQLENLQDLDVSNNHL 211
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 105/197 (53%), Gaps = 23/197 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ N L +L N + L +L L L+NN+L++L ++G L +L+ L +E NQL
Sbjct: 223 SLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLIT 282
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD---------- 170
LP +I +L LY NN + +L + L L+ +++ NQ+ + ++
Sbjct: 283 LPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNL 342
Query: 171 ------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
E L NL ++L+NNQ+ ++ + + L L YL L +NQL + L ++
Sbjct: 343 NLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQL-KTLPNE 401
Query: 219 IRGLKRLRTVDLSYNKI 235
I L+ L+ ++L N++
Sbjct: 402 IGQLENLQYLNLENNQL 418
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 25/194 (12%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ N L +L + L L +L+L NN L++L ++G L L+ L +E NQL LP +
Sbjct: 273 LHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQE 332
Query: 125 I-----------------QLFSQLGSL----YAN--NNRITSLDGLLRGLTKLQVFNMDF 161
I L +++G L Y N NN++ +L + L LQ N++
Sbjct: 333 IGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLEN 392
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQ+ + +E L NL ++L+NNQ+ ++ + + L L YL L +NQL + L ++I
Sbjct: 393 NQLKTL-PNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQL-KTLPNEIGQ 450
Query: 222 LKRLRTVDLSYNKI 235
L+ L+ ++L N++
Sbjct: 451 LENLQYLNLENNQL 464
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++LH+ N L +L + L +L L L+NN+L +L ++G L LQ L +E NQL+
Sbjct: 315 SLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKT 374
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++ +L + L LQ N++ NQ+ + +E L NL
Sbjct: 375 LPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTL-PNEIGQLENLQY 433
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L+NNQ+ ++ + + L L YL L +NQL + L ++I L+ L+ ++L N++
Sbjct: 434 LNLENNQLKTLPNEIGQLENLQYLNLENNQL-KTLPNEIGRLENLQYLNLENNQL 487
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N LT+L + L +L L ++NN L +L ++G L L+ L + N L L
Sbjct: 178 LEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITL 237
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L L +NN++ +L + L +L+ +++ NQ+ + + E L L+ +
Sbjct: 238 PNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQ-EIGTLQKLEYL 296
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L+NN + ++ + + L L L+L HNQL
Sbjct: 297 YLKNNHLETLPNEIGKLRSLKRLHLEHNQL 326
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L N + L +L +L L NN+LK+L ++G L LQ L +E NQL+ L
Sbjct: 408 LQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTL 467
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L L NN++ +L + L L+V N+ NQ+ + + E L +L +
Sbjct: 468 PNEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQ-EIVGLKHLQIL 526
Query: 182 SLQNNQITSMNSSLSGLTKL 201
L+N I ++ S + KL
Sbjct: 527 KLKN--IPALLSEKETIRKL 544
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
N +L+ D+ L L++N+L +L ++G L KL+ L + N+L LP++I L L
Sbjct: 31 NEALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELD 90
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+NR+T+ + L +L+ + NQ+ + + E L L + L+NN + ++ S +
Sbjct: 91 LFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPK-EIGTLQKLQHLYLKNNHLATLPSEI 149
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +L LYL +N L L +I L+ L + L N++
Sbjct: 150 GRLQRLKRLYLYNNHLM-TLPKEIGKLQNLEQLYLEDNQL 188
>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
Length = 394
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 10/218 (4%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L ++L PA I L LV +N+ + P I R+L++ N+LT L +
Sbjct: 83 LEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNHLTILPAEIG 142
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT L L L N L S+ ++G L+ L L +E N L LP++I L L N
Sbjct: 143 QLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDNMLTELPAEIGQLKSLVELKLEGNE 202
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+TS+ + LT L V N+++NQ+T + E L +L ++L NNQ+TS+ + + L
Sbjct: 203 LTSMPAEIGQLTSLVVSNLNYNQLTELPA-EIGQLKSLRELNLSNNQLTSLPAEIGQLKS 261
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L L N LTE L +I LK L ++L N++
Sbjct: 262 LVELKLEDNMLTE-LPAEIGQLKSLVELNLYNNRLTSV 298
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R +++G N LTSL + LT L L L N L S+ ++G L+ L L +E N L
Sbjct: 8 ALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLEDNMLTE 67
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L N +TS+ + L L V N+++NQ+T + E L +L
Sbjct: 68 LPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPA-EIGQLKSLRE 126
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
++L NN +T + + + LT L L L N+LT
Sbjct: 127 LNLSNNHLTILPAEIGQLTSLVELKLEGNELT 158
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
+N LT L + L L L L+NN+L SL ++G L L L +E N L LP++I
Sbjct: 223 YNQLTELPAEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLTELPAEIGQL 282
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
L L NNR+TS+ + LT L ++ N +T + E L +L + L NN++
Sbjct: 283 KSLVELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPA-EIGQLKSLRELKLWNNRL 341
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLT 212
TS+ + + LT L L L N+LT
Sbjct: 342 TSVPAEIGQLTSLTELDLRCNELT 365
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + N LT L + L L L L N L S+ ++G L+ L + + NQL LP+
Sbjct: 57 ELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPA 116
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------- 170
+I L L +NN +T L + LT L ++ N++T V +
Sbjct: 117 EIGQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLE 176
Query: 171 ---------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
E L +L + L+ N++TSM + + LT L L++NQLTE L +I
Sbjct: 177 DNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTE-LPAEIGQ 235
Query: 222 LKRLRTVDLSYNKINKF 238
LK LR ++LS N++
Sbjct: 236 LKSLRELNLSNNQLTSL 252
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LT L + L L L L NNRL S+ ++G L+ L L +E N L
Sbjct: 261 SLVELKLEDNMLTELPAEIGQLKSLVELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTE 320
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NNR+TS+ + LT L ++ N++T V E L +L
Sbjct: 321 LPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTSLTELDLRCNELTSVPA-EIGQLTSLTE 379
Query: 181 ISLQNNQITSMNSSL 195
+ L NQ+TS+ + +
Sbjct: 380 LVLHKNQLTSLPAEI 394
>gi|254393925|ref|ZP_05009025.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|197707512|gb|EDY53324.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
ATCC 27064]
Length = 326
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDL-NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
+R L +G N LTS+ L L L ++L+L++NRL L LG L++L+ L I +N L
Sbjct: 134 CLRTLDLGHNALTSVPGELGRLAALTDFLYLHHNRLAGLPESLGRLTRLRYLNISENSLT 193
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP I L L A +NR+T+L G + GL++L+ + N + + + L
Sbjct: 194 DLPRSIGTMHGLVELRAQHNRLTALPGTVGGLSRLRELWLRGNALQGLPHST-AGMTQLR 252
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ L+ N +T + L+GL L +L L NQ+T+ L + + L +DL +N +
Sbjct: 253 HLDLRENALTEIPQPLAGLPLLRHLDLRANQVTK-LPGWLASMPSLEKLDLRWNPVEP 309
>gi|193215999|ref|YP_001997198.1| hypothetical protein Ctha_2300 [Chloroherpeton thalassium ATCC
35110]
gi|193089476|gb|ACF14751.1| leucine-rich repeat-containing protein typical subtype
[Chloroherpeton thalassium ATCC 35110]
Length = 264
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 97/187 (51%), Gaps = 16/187 (8%)
Query: 57 AFPPTIRKLHVGFNNLTSLNNS----------LRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
A PP + +L +NL S+N S + +L L L+NN + L + GTLS
Sbjct: 63 ALPPKVMRL----SNLQSINASSNQISIVPKYIVSFQNLQELNLSNNEISDLPSKFGTLS 118
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
L+ L + N++ LP DI L L NNN + L L L +L+ + N++
Sbjct: 119 NLKNLNLNNNKISELPPDINGLQNLEWLLFNNNNVKKLPPTLNQLKELRHLYAEGNKLDS 178
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ DE NL NL+ + L NN+I ++ +S L KL YLYL +N+LT L + I LK LR
Sbjct: 179 I-PDEIGNLKNLEELYLNNNKIVYISPEISNLNKLRYLYLKNNKLTT-LPNGIENLKSLR 236
Query: 227 TVDLSYN 233
+DLS N
Sbjct: 237 EIDLSGN 243
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
++ L + GL +L WL NNN +K L L L +L+ L E N+L+++P +I L
Sbjct: 130 ISELPPDINGLQNLEWLLFNNNNVKKLPPTLNQLKELRHLYAEGNKLDSIPDEIGNLKNL 189
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
LY NNN+I + + L KL+ + N++T + + +NL +L I L N +
Sbjct: 190 EELYLNNNKIVYISPEISNLNKLRYLYLKNNKLTTL-PNGIENLKSLREIDLSGNDFS 246
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------- 170
L+ALP + S L S+ A++N+I+ + + LQ N+ N+I+ +
Sbjct: 61 LKALPPKVMRLSNLQSINASSNQISIVPKYIVSFQNLQELNLSNNEISDLPSKFGTLSNL 120
Query: 171 ---------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
+ L NL+ + NN + + +L+ L +L +LY N+L + +
Sbjct: 121 KNLNLNNNKISELPPDINGLQNLEWLLFNNNNVKKLPPTLNQLKELRHLYAEGNKL-DSI 179
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
D+I LK L + L+ NKI
Sbjct: 180 PDEIGNLKNLEELYLNNNKI 199
>gi|418755366|ref|ZP_13311573.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964377|gb|EKO32267.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 513
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N LT+ N + L L WL+L +N+L +L ++GTL KLQ L ++ N L L
Sbjct: 86 LEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATL 145
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS+I +L LY NN + +L + L L+ ++ NQ+T + + E L NL +
Sbjct: 146 PSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQ-EIGQLENLQDL 204
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ NN +T++ + + L L L LS+N L L ++I L+ L ++LS N++
Sbjct: 205 DVSNNHLTTLPNEIGKLRSLKRLNLSNNLLI-TLPNEIGKLQNLEELNLSNNQL 257
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 23/193 (11%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ N L +L + L L +L+L NN L++L ++G L L+ L +E NQL LP +
Sbjct: 273 LHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQE 332
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-------------- 170
I L SL +NN + +L + L L+ N++ NQ+T + ++
Sbjct: 333 IGTLQNLPSLDVSNNHLVTLPNEIGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSN 392
Query: 171 --------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
E L NL ++L+NNQ+ ++ + + L L YL L +NQL + L ++I L
Sbjct: 393 NQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQL-KTLPNEIGRL 451
Query: 223 KRLRTVDLSYNKI 235
+ L+ ++L N++
Sbjct: 452 QNLKVLNLGGNQL 464
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N L +L N + L L WL L+NNRL +L ++G L L+ L + N+L
Sbjct: 37 PMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRL 96
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P++I +L LY +N++ +L + L KLQ + N + + E L L
Sbjct: 97 TTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATL-PSEIGRLQRL 155
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NN + ++ + L L LYL NQLT L +I L+ L+ +D+S N +
Sbjct: 156 KRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLT-TLPQEIGQLENLQDLDVSNNHL 211
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ N L +L N + L +L L L+NN+L +L ++G L +L+ L +E NQL
Sbjct: 223 SLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLIT 282
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I +L LY NN + +L + L L+ +++ NQ+ + + E L NL S
Sbjct: 283 LPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQ-EIGTLQNLPS 341
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ + NN + ++ + + L L L L +NQLT
Sbjct: 342 LDVSNNHLVTLPNEIGKLLSLKRLNLENNQLT 373
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N LT+L + L +L L ++NN L +L ++G L L+ L + N L L
Sbjct: 178 LEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITL 237
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L L +NN++ +L + L +L+ +++ NQ+ + + E L L+ +
Sbjct: 238 PNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQ-EIGTLQKLEYL 296
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+NN + ++ + + L L L+L HNQL L +I L+ L ++D+S N +
Sbjct: 297 YLKNNHLETLPNEIGKLRSLKRLHLEHNQLI-TLPQEIGTLQNLPSLDVSNNHL 349
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++LH+ N L +L + L +L L ++NN L +L ++G L L+ L +E NQL
Sbjct: 315 SLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLLSLKRLNLENNQLTT 374
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L +L +NN++ +L + L LQ N++ NQ+ + +E L NL
Sbjct: 375 LPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTL-PNEIGQLENLQY 433
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
++L+NNQ+ ++ + + L L L L NQL L +I GLK L+ + L
Sbjct: 434 LNLENNQLKTLPNEIGRLQNLKVLNLGGNQLV-TLPQEIVGLKHLQILKLK 483
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
N +L+ D+ L+L++N+L +L ++G L KL+ L + N+L LP++I L L
Sbjct: 31 NEALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELD 90
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+NR+T+ + L +L+ + NQ+ + + E L L + L+NN + ++ S +
Sbjct: 91 LFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPK-EIGTLQKLQHLYLKNNHLATLPSEI 149
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +L LYL +N L L +I L+ L + L N++
Sbjct: 150 GRLQRLKRLYLYNNHLM-TLPKEIGKLQNLEQLYLEDNQL 188
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL-----------------------KSLEGQ 101
L V N+L +L N + L L L L NN+L +L +
Sbjct: 342 LDVSNNHLVTLPNEIGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNE 401
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L LQ L +E NQL+ LP++I L L NN++ +L + L L+V N+
Sbjct: 402 IGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGG 461
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
NQ+ + + E L +L + L+N I ++ S + KL
Sbjct: 462 NQLVTLPQ-EIVGLKHLQILKLKN--IPALLSEKETIRKL 498
>gi|198433833|ref|XP_002122418.1| PREDICTED: similar to Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) [Ciona intestinalis]
Length = 531
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 96/168 (57%), Gaps = 2/168 (1%)
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ 130
+LTSL+ +++ +T L +FL N+L + +LG L L +L + +N L +LP+ +Q Q
Sbjct: 61 DLTSLSTTIKNMTQLCEIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLPASLQNLKQ 120
Query: 131 LGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L L +N++ + ++ L L+ + FN+IT + +NL NL + ++ N++
Sbjct: 121 LKMLDLRHNKLREVPQVVYQLQSLRKLYLRFNKITTI-DPAIENLSNLTQLIIRENKVRE 179
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ S + LT+L + +S+N+L E + ++I + + +DL YN++ +
Sbjct: 180 IPSEIGKLTQLVTIDVSYNELKE-IPEEIGNCRLVTFLDLQYNRLTQL 226
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LT L + + L L L ++NN L+ + G +G L+ LQ L +E+N LE+
Sbjct: 353 SMVELCLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEENNLES 412
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD---EFQNLHN 177
LPS+I+ +QL L N++T L L L+ L + + NQ+ RD E NL +
Sbjct: 413 LPSEIEHLTQLRKLKLQGNKLTVLPRGLGHLSNLTILAVGENQM----RDLPNEIGNLKS 468
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
L+ + L +N + + L+ TKLA + + L++
Sbjct: 469 LEELYLNDNPLQVLPFELALCTKLALMSVEDCPLSQI 505
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 98/179 (54%), Gaps = 2/179 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++RKL++ FN +T+++ ++ L++L L + N+++ + ++G L++L + + N+L+
Sbjct: 143 SLRKLYLRFNKITTIDPAIENLSNLTQLIIRENKVREIPSEIGKLTQLVTIDVSYNELKE 202
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P +I + L NR+T L + L KL + +N + + R QN L
Sbjct: 203 IPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPRS-LQNCVLLSD 261
Query: 181 ISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++L+NN I ++ + LS LT L + L+ N+ + + + L T+++ +N++++
Sbjct: 262 LNLENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGPSQFTSLGTLNMEHNQVDRI 320
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
+ V +N L + + + +L L NRL L +G L KL L ++ N L LP
Sbjct: 193 IDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPRS 252
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQ------------------------VFNM 159
+Q L L NN I +L DG L LT L NM
Sbjct: 253 LQNCVLLSDLNLENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGPSQFTSLGTLNM 312
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ NQ+ + + F +L ++++++NQ+TS+ + + L L+ NQLT L DDI
Sbjct: 313 EHNQVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTR-LPDDI 371
Query: 220 RGLKRLRTVDLSYNKINKF 238
L+ L+ + +S N + K
Sbjct: 372 GKLQSLQVLMVSNNLLRKI 390
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LTSL + + L LN+N+L L +G L LQ+L++ N L +P
Sbjct: 334 LNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGS 393
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L L N + SL + LT+L+ + N++T++ R +L NL +++
Sbjct: 394 IGQLTNLQCLDLEENNLESLPSEIEHLTQLRKLKLQGNKLTVLPRG-LGHLSNLTILAVG 452
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
NQ+ + + + L L LYL+ N L
Sbjct: 453 ENQMRDLPNEIGNLKSLEELYLNDNPL 479
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
L VG N + L N + L L L+LN+N L+ L +L +KL L+ +E L +P+
Sbjct: 449 LAVGENQMRDLPNEIGNLKSLEELYLNDNPLQVLPFELALCTKLALMSVEDCPLSQIPT 507
>gi|320170940|gb|EFW47839.1| hypothetical protein CAOG_05777 [Capsaspora owczarzaki ATCC 30864]
Length = 789
Score = 76.6 bits (187), Expect = 7e-12, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
L G AL L+ + N IT + NAF + + + +N +T++ +S GLT LN+L +
Sbjct: 76 LTGLTALTNLVFLRNQITSVDANAFTGLTALTYMDLSYNQMTTIPSSAFTGLTVLNFLNI 135
Query: 91 NNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
NN++ S+ T L+ L+ L + NQ+ ++ + S +A
Sbjct: 136 GNNKITSIPSSAFTGLAALEQLDLGTNQITSISA---------SAFA------------- 173
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSH 208
GLT + ++ N IT + + F L L + +Q N ITS +S +GLT L +L LS
Sbjct: 174 GLTAMFSLDLQSNNITSIPANTFTGLAALSMLYMQTNLITSFAASAFTGLTSLGFLDLSA 233
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
NQLT+ + GL ++ + L NKI T
Sbjct: 234 NQLTDIGSSEFTGLNAMQRLLLHNNKITSLST 265
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 49/211 (23%)
Query: 57 AFPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIE 114
A P + L++ N +TS+ S L GLT L L N++ S++ T L+ L + +
Sbjct: 53 AIPLATKLLYLQDNQITSIPASALTGLTALTNLVFLRNQITSVDANAFTGLTALTYMDLS 112
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
NQ+ +PS GLT L N+ N+IT + F
Sbjct: 113 YNQMTTIPSSA----------------------FTGLTVLNFLNIGNNKITSIPSSAFTG 150
Query: 175 LHNLDSISLQNNQITSMNSS-------------------------LSGLTKLAYLYLSHN 209
L L+ + L NQITS+++S +GL L+ LY+ N
Sbjct: 151 LAALEQLDLGTNQITSISASAFAGLTAMFSLDLQSNNITSIPANTFTGLAALSMLYMQTN 210
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+T F GL L +DLS N++ G+
Sbjct: 211 LITSFAASAFTGLTSLGFLDLSANQLTDIGS 241
Score = 43.9 bits (102), Expect = 0.057, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 15/149 (10%)
Query: 14 ALNLIDLEPETGSHPLTS---DDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVG 68
AL +DL G++ +TS G A+ +L L +NNIT I N F + L++
Sbjct: 153 ALEQLDL----GTNQITSISASAFAGLTAMFSLDLQSNNITSIPANTFTGLAALSMLYMQ 208
Query: 69 FNNLTSLNNS-LRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI- 125
N +TS S GLT L +L L+ N+L + + L+ +Q L++ N++ +L ++
Sbjct: 209 TNLITSFAASAFTGLTSLGFLDLSANQLTDIGSSEFTGLNAMQRLLLHNNKITSLSTNAF 268
Query: 126 --QLFSQLGSLYANNNRITSL-DGLLRGL 151
+ L +L N N +T+L GL +GL
Sbjct: 269 AGLTATGLQALTLNGNPLTTLPPGLFKGL 297
>gi|340712839|ref|XP_003394961.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
terrestris]
Length = 610
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ +L + +N+T L +++R LT L +L N+L +L ++G L L+ L + +N L +
Sbjct: 130 CLERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTS 189
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ ++ L L +N+++ + ++ LT L + FN++ V D +NL NL
Sbjct: 190 LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYV-SDNIRNLTNLTM 248
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL+ N+I + + + L L +SHN L E L ++I +L T+DL +N++
Sbjct: 249 LSLRENKIRELPAGIGKLVNLITFDVSHNHL-EHLPEEIGNCVQLSTLDLQHNEL 302
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N LT + + ++ L +L L L+NN LK + + L KL++L +E+N++E+LP+
Sbjct: 435 ELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPN 494
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +N++TSL + LT L ++ N + + +E L NLDS+ +
Sbjct: 495 EIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL-PEEIGTLENLDSLYV 553
Query: 184 QNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+N + ++ L+ T L+ + + + L++ + + G
Sbjct: 554 NDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAG 592
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP 122
+L + +N LTS+ SL ++ + N++ L +G L +LS L + + +N A P
Sbjct: 317 RLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYP 376
Query: 123 SD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
S F+ + S+ +N+I + G+ L NM NQ+T + D N+
Sbjct: 377 SGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLD-IGTWVNMVE 435
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ+T + + L L L LS+N L + + I L++LR +DL NKI
Sbjct: 436 LNLGTNQLTKIPDDIQCLQNLEVLILSNN-LLKRIPASIANLRKLRVLDLEENKI 489
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L + ++ PA I L L+ +++H H P I L + N L + +++
Sbjct: 251 LRENKIRELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIG 310
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 139
L L L L NRL S+ L + +E NQ+ LP + S L ++ + N
Sbjct: 311 RLVLLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRN 370
Query: 140 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
T+ G T + N++ N+I + F NL ++++ NQ+T++ +
Sbjct: 371 AFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLDIGTW 430
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L NQLT+ + DDI+ L+ L + LS N + +
Sbjct: 431 VNMVELNLGTNQLTK-IPDDIQCLQNLEVLILSNNLLKRI 469
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 15 LNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV---GFNN 71
+N+++L T DD++ L L+L NN + I A +RKL V N
Sbjct: 431 VNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIP--ASIANLRKLRVLDLEENK 488
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
+ SL N + L DL L L +N++ SL +G L+ L L + +N L LP +I L
Sbjct: 489 IESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENL 548
Query: 132 GSLYANNN 139
SLY N+N
Sbjct: 549 DSLYVNDN 556
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L + N L+ + + + LT+L LFL NR++ + + L+ L +L + +N++
Sbjct: 199 SLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRE 258
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ I L + ++N + L + +L ++ N++ + D L L
Sbjct: 259 LPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP-DTIGRLVLLTR 317
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ L+ N++TS+ SL+ + + NQ+++ + L L T+ LS N + +
Sbjct: 318 LGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPS 377
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 44/260 (16%)
Query: 17 LIDLEPETG----------------SHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP 60
L+ L PE G S P T ++LK +L L L +N ++ I + +
Sbjct: 164 LVTLPPEIGCLGNLETLALSENSLTSLPNTLENLK---SLRVLDLRHNKLSEIPDVVYKL 220
Query: 61 T-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
T + L + FN + +++++R LT+L L L N+++ L +G L L + N LE
Sbjct: 221 TNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLVNLITFDVSHNHLE 280
Query: 120 ALPSDIQLFSQLGSLYANNN-----------------------RITSLDGLLRGLTKLQV 156
LP +I QL +L +N R+TS+ L +
Sbjct: 281 HLPEEIGNCVQLSTLDLQHNELLDIPDTIGRLVLLTRLGLRYNRLTSIPKSLANCKLMDE 340
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFL 215
F+++ NQ++ + +L +L +I+L N T+ S + T + + L HN++ +
Sbjct: 341 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIP 400
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
K L +++ N++
Sbjct: 401 YGIFSRAKNLAKLNMKENQL 420
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 25/164 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ N LT+L + ++ L L N+L + + L L++L++ N L+ +
Sbjct: 410 LAKLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRI 469
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I AN L KL+V +++ N+I + +E L +L +
Sbjct: 470 PASI----------AN-------------LRKLRVLDLEENKIESL-PNEIGFLRDLQKL 505
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
LQ+NQ+TS+ ++ LT L YL + N L +L ++I L+ L
Sbjct: 506 ILQSNQVTSLPRAIGHLTNLTYLSVGENNLN-YLPEEIGTLENL 548
>gi|260819403|ref|XP_002605026.1| hypothetical protein BRAFLDRAFT_124131 [Branchiostoma floridae]
gi|229290356|gb|EEN61036.1| hypothetical protein BRAFLDRAFT_124131 [Branchiostoma floridae]
Length = 667
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+LH G N L L +S L DL L+L N L++L G L L+ L+I++N L+ L
Sbjct: 112 LRELHAGENCLQELPDSFSDLKDLRLLYLTGNELRTLPSDFGHLEHLETLMIDENHLKKL 171
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +L A+NN++ +L GL++L++ N+ N+++ + + F +L L +
Sbjct: 172 PKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCL-PESFGDLPQLQEV 230
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
L N ++ + L L LY+ +N L E
Sbjct: 231 ELSGNSLSFLTKDLKSSHCLRKLYVDNNVLKEL 263
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N+L +L LT L L N L+ L L L+LL + N+L LPSD
Sbjct: 92 LSVMGNDLETLPTLFGNLTLLRELHAGENCLQELPDSFSDLKDLRLLYLTGNELRTLPSD 151
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
L +L + N + L L +L+ F+ N++ + + F L L ++L
Sbjct: 152 FGHLEHLETLMIDENHLKKLPKTFGSLRRLERFDASNNKLETL-PESFGGLSRLKILNLS 210
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
N+++ + S L +L + LS N L+ FL D++ LR +
Sbjct: 211 TNKLSCLPESFGDLPQLQEVELSGNSLS-FLTKDLKSSHCLRKL 253
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL- 118
P ++++ + N+L+ L L+ L L+++NN LK L +G LS +Q + + N+L
Sbjct: 225 PQLQEVELSGNSLSFLTKDLKSSHCLRKLYVDNNVLKELPPWVGHLSSIQEMSLRDNKLM 284
Query: 119 -EALPSDIQLFS--QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN- 174
+ LP S L L + N IT+L L L L+ ++ + I + R FQN
Sbjct: 285 NQPLPESFPARSGRTLRLLDLSGNFITALPASLGQLGSLESLHLG-SAIGELERRHFQNG 343
Query: 175 ------------LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
L +L ++ L NQ+T + S L L +L + N L E
Sbjct: 344 NWLCALPENFGRLRHLKTLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLKEL 395
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L L L L+ N+L L G G+L L+ L + QN L+ LP S
Sbjct: 344 NWLCALPENFGRLRHLKTLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLKELPDSFCELS 403
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L +N R++SL L +D N + + + F L L ++ L N++
Sbjct: 404 NLQLLPSNFGRLSSLVDL----------RLDNNMLGEL-PESFAELRQLRTLDLFCNELR 452
Query: 190 SMNSSLSGLTKLAYLYLSHNQLT 212
+ +L LT + L + N+ +
Sbjct: 453 EVPGALKHLTSITRLDMDKNKFS 475
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLV--------- 112
++ LH+ N LT L S L L +L + N LK L LS LQLL
Sbjct: 359 LKTLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLKELPDSFCELSNLQLLPSNFGRLSSL 418
Query: 113 ----IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
++ N L LP QL +L N + + G L+ LT + +MD N+ ++
Sbjct: 419 VDLRLDNNMLGELPESFAELRQLRTLDLFCNELREVPGALKHLTSITRLDMDKNKFSL 476
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 25/189 (13%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWL-------------FLNNNRLKSLEGQLGTLSK 107
T+R L + N +T+L SL L L L F N N L +L G L
Sbjct: 299 TLRLLDLSGNFITALPASLGQLGSLESLHLGSAIGELERRHFQNGNWLCALPENFGRLRH 358
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +++NQL LP L L N + L L+ LQ+ +F +++
Sbjct: 359 LKTLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLKELPDSFCELSNLQLLPSNFGRLS-- 416
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+L + L NN + + S + L +L L L N+L E + ++ L +
Sbjct: 417 ---------SLVDLRLDNNMLGELPESFAELRQLRTLDLFCNELRE-VPGALKHLTSITR 466
Query: 228 VDLSYNKIN 236
+D+ NK +
Sbjct: 467 LDMDKNKFS 475
>gi|434385707|ref|YP_007096318.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
gi|428016697|gb|AFY92791.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
Length = 400
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 29/195 (14%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L+ L LVNN + + E+ T ++ L + N LT+L S+ LT+L L L NNRL +
Sbjct: 40 SLLRLTLVNNMLKTLPESIGQLTNLKSLEIRDNRLTTLPESIELLTNLESLELWNNRLIN 99
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L +G L+ L LL ++QNQL LP + + L + NN++TSL
Sbjct: 100 LPESIGRLTNLTLLDLQQNQLTTLPESVGQLTSLNYIELGNNQLTSLP------------ 147
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT---EF 214
D F+NL +L S+ L +NQ TS+ S+ LT L +L L NQLT EF
Sbjct: 148 ------------DSFKNLIDLQSLQLSDNQFTSVPESIGELTNLKWLDLDGNQLTNLPEF 195
Query: 215 LLDDIRGLKRLRTVD 229
+ + LKRL+ D
Sbjct: 196 -IGEFSNLKRLKIQD 209
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
+ +G N LTSL +S + L DL L L++N+ S+ +G L+ L+ L ++ NQL LP
Sbjct: 136 IELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELTNLKWLDLDGNQLTNLPEF 195
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
I FS L L +N +TSL L KL+ + N +T
Sbjct: 196 IGEFSNLKRLKIQDNHLTSLPLWFTKLEKLERLELSNNPLT 236
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N TS+ S+ LT+L WL L+ N+L +L +G S L+ L I+ N L +L
Sbjct: 156 LQSLQLSDNQFTSVPESIGELTNLKWLDLDGNQLTNLPEFIGEFSNLKRLKIQDNHLTSL 215
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
P +L L +NN +T L +L+ L KL+
Sbjct: 216 PLWFTKLEKLERLELSNNPLTDL-SILQSLPKLK 248
>gi|443707193|gb|ELU02905.1| hypothetical protein CAPTEDRAFT_191186 [Capitella teleta]
Length = 488
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 9/200 (4%)
Query: 49 NITHIHENAFP-------PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
N++H+ A P P + L++ N LT L + L L +L+L N+L +L
Sbjct: 146 NLSHLQLTACPARLGFLGPQLTSLNLSSNKLTELPPEVGCLVGLKYLYLRGNQLTTLPHS 205
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L L+ LQ L ++ N + PS + L L ++N +TS+ +++ L L+ F++ F
Sbjct: 206 LCHLNNLQALDVQHNLFDEFPSCLPHMEGLQCLRIDSNSLTSIPAVIKSLYNLREFSIAF 265
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQI+ + +E L NL + L +N +T + S+L L L L +S+N++ L I
Sbjct: 266 NQISHI-PEEISQLRNLQVLLLSHNMLTHVPSNLGSLKHLVKLDVSYNKIFT-LPSSIVW 323
Query: 222 LKRLRTVDLSYNKINKFGTR 241
RL T+ ++N++ K +
Sbjct: 324 CSRLNTLLANHNRLVKLPEK 343
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+ + FN ++ + + L +L L L++N L + LG+L L L + N++ L
Sbjct: 258 LREFSIAFNQISHIPEEISQLRNLQVLLLSHNMLTHVPSNLGSLKHLVKLDVSYNKIFTL 317
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
PS I S+L +L AN+NR+ L + L L+ N+ N+++
Sbjct: 318 PSSIVWCSRLNTLLANHNRLVKLPEKIGHLFTLKEINIQCNRLS 361
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 42 TLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG 100
LLL +N +TH+ N + KL V +N + +L +S+ + LN L N+NRL L
Sbjct: 283 VLLLSHNMLTHVPSNLGSLKHLVKLDVSYNKIFTLPSSIVWCSRLNTLLANHNRLVKLPE 342
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLF 128
++G L L+ + I+ N+L LP+ + L
Sbjct: 343 KIGHLFTLKEINIQCNRLSYLPASVMLM 370
>gi|440796624|gb|ELR17733.1| Fbox domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 1783
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 31/208 (14%)
Query: 58 FPPTIR------KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I +LH+ N L L L LT+L L L+ N L+SL +LG L+ L+ +
Sbjct: 1216 LPPEIEHLQSLTELHMSVNQLRELPKELGKLTNLTHLDLSRNSLQSLPEELGELTNLRQI 1275
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR-- 169
++ +N+L+ P + L L + N IT L L LT L + +++ N+IT
Sbjct: 1276 LLHRNRLKQFPLFVTKLVSLERLDLDTNAITHLPESLSQLTNLVLLDLNRNRITEAAALR 1335
Query: 170 ----------------------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
DE L L+S++L N++T++ +L LT L Y+Y
Sbjct: 1336 PACALTSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALPPALGQLTALKYVYAC 1395
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N+LT + D++ GL L+++DLS+N++
Sbjct: 1396 YNRLTS-VPDELGGLTNLQSLDLSHNEL 1422
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 20/174 (11%)
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT L LF+ N L +L ++G L++L+ L + +N+L ALP + + L +YA NR
Sbjct: 1339 ALTSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALPPALGQLTALKYVYACYNR 1398
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+TS+ L GLT LQ ++ N++ V + + L L+ S+ N ++ + L LT
Sbjct: 1399 LTSVPDELGGLTNLQSLDLSHNELRAVF--DVRRLARLEVFSVYKNCLSRVPPGLGQLTS 1456
Query: 201 LAYLYLSHNQL------------------TEFLLDDIRGLKRLRTVDLSYNKIN 236
L L+L N T +D++ L+ LR +++ N I+
Sbjct: 1457 LKRLWLGINAFHTEPPPPMSELSTVAAATTTESIDEVAELRSLRVLNMRGNDIH 1510
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+ L + N+LT+L + T+L L L +NRL SL + L L L +++N+LE+
Sbjct: 1011 TMTYLWMNENSLTALPPPVLLFTNLIELDLKHNRLTSLPPAISRLQNLVWLNLDENKLES 1070
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP ++ + L SL+ + NR+TSL + LT L ++ NQ+ + F N NL
Sbjct: 1071 LPDELGQLTNLTSLFLSYNRLTSLPDTMSRLTALTGVGLNANQLRSLPDTWFANARNLRE 1130
Query: 181 ISLQNNQI-----TSMNSSLSGLTKLAYL 204
+ N + ++++ ++GLT L+ L
Sbjct: 1131 LYFWRNPMLGSLAPNVDAGMAGLTALSKL 1159
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 101/242 (41%), Gaps = 48/242 (19%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLN 91
P L+ L+ ++ H + PP I +L + N L SL + L LT+L LFL+
Sbjct: 1028 PVLLFTNLIELDLKHNRLTSLPPAISRLQNLVWLNLDENKLESLPDELGQLTNLTSLFLS 1087
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI--------QLF----SQLGSLYANNN 139
NRL SL + L+ L + + NQL +LP +L+ LGSL N
Sbjct: 1088 YNRLTSLPDTMSRLTALTGVGLNANQLRSLPDTWFANARNLRELYFWRNPMLGSLAPN-- 1145
Query: 140 RITSLDGLLRGLTKLQVFNMDF-----------------------NQITMVRRDEFQNLH 176
+D + GLT L N+ N++ V + F L
Sbjct: 1146 ----VDAGMAGLTALSKLNVHSCGLGTLPHSLTLLTDLTYLELGGNKLAEVDPNLFVQLT 1201
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NL+S+ L N + + + L L L++S NQL E L ++ L L +DLS N +
Sbjct: 1202 NLNSLWLYTNSLKVLPPEIEHLQSLTELHMSVNQLRE-LPKELGKLTNLTHLDLSRNSLQ 1260
Query: 237 KF 238
Sbjct: 1261 SL 1262
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 81/274 (29%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L +L L+ N +T A PP + +L + +N LTS+ + L GLT+L L L++N
Sbjct: 1366 LESLNLIENRLT-----ALPPALGQLTALKYVYACYNRLTSVPDELGGLTNLQSLDLSHN 1420
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY------------------ 135
L+++ + L++L++ + +N L +P + + L L+
Sbjct: 1421 ELRAV-FDVRRLARLEVFSVYKNCLSRVPPGLGQLTSLKRLWLGINAFHTEPPPPMSELS 1479
Query: 136 ------------------------ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR-- 169
N I S+ L LT L V ++ N++T R
Sbjct: 1480 TVAAATTTESIDEVAELRSLRVLNMRGNDIHSVPEALSRLTNLDVLSLWRNKLTGPRAIP 1539
Query: 170 -------------------------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+E L NL ++ L+ N I+S+ +SLS LT+L +L
Sbjct: 1540 SSVWQSLTGLRHLHLGENNLQEELPEEIGALTNLRALHLEKNGISSLPASLSRLTRLGHL 1599
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+S N+ L + + L T+D++ N+ +
Sbjct: 1600 NISANRFEGALPPIVLAITSLTTLDIACNRFTRL 1633
>gi|260788630|ref|XP_002589352.1| hypothetical protein BRAFLDRAFT_218112 [Branchiostoma floridae]
gi|229274529|gb|EEN45363.1| hypothetical protein BRAFLDRAFT_218112 [Branchiostoma floridae]
Length = 340
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LTSL ++ L + L++ NN+LK + + LS LQ+L N+ P ++ +L
Sbjct: 2 LTSLPQAIGSLQKMTHLYIYNNQLKEVPPGVCMLSNLQVLDANNNKFSTFPPGVEKLQKL 61
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY +N++T + GL KL+ ++ NQ+T + +L NL+ S+ NN++++
Sbjct: 62 TKLYIYDNQLTEVPS---GLQKLRELGINGNQLTEIPSG-LCSLPNLEKFSVGNNKLSTF 117
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L KL LY+ NQLTE + + L L +D+S NK++ F
Sbjct: 118 PPGVEKLQKLRELYIYGNQLTE-VPSGVCSLPNLEVLDVSSNKLSAF 163
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 56 NAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ FPP + KL ++ N LT + + GL L L +N N+L + L +L L+
Sbjct: 49 STFPPGVEKLQKLTKLYIYDNQLTEVPS---GLQKLRELGINGNQLTEIPSGLCSLPNLE 105
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
+ N+L P ++ +L LY N++T + + L L+V ++ N+++
Sbjct: 106 KFSVGNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLDVSSNKLSAFPP 165
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+ L L + + +N++T + + L+ L L + N + +L DD+ LKRL+ +D
Sbjct: 166 G-VEKLQKLKELGIADNKLTKLPPGVCLLSNLERLIANRNPIA-YLPDDVTRLKRLKLLD 223
Query: 230 LSYNKINKF 238
++ + ++F
Sbjct: 224 VASCQFDEF 232
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 5/174 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L + + L++L L NNN+ + + L KL L I NQL +PS
Sbjct: 18 LYIYNNQLKEVPPGVCMLSNLQVLDANNNKFSTFPPGVEKLQKLTKLYIYDNQLTEVPSG 77
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
+Q +LG N N++T + L L L+ F++ N+++ + L L + +
Sbjct: 78 LQKLRELG---INGNQLTEIPSGLCSLPNLEKFSVGNNKLSTFPPG-VEKLQKLRELYIY 133
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQ+T + S + L L L +S N+L+ F + L++L+ + ++ NK+ K
Sbjct: 134 GNQLTEVPSGVCSLPNLEVLDVSSNKLSAF-PPGVEKLQKLKELGIADNKLTKL 186
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 29/188 (15%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ FPP + R+L++ N LT + + + L +L L +++N+L + + L KL+
Sbjct: 115 STFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLDVSSNKLSAFPPGVEKLQKLK 174
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L I N+L LP + L S L L AN N I L + L +L++ ++ Q R
Sbjct: 175 ELGIADNKLTKLPPGVCLLSNLERLIANRNPIAYLPDDVTRLKRLKLLDVASCQFDEFPR 234
Query: 170 DEFQ-----------------------NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
+ +LHNL + L NN+ + +L L + LY+
Sbjct: 235 QVLRLKTLEELYAGQPEGRKTLPSTLSHLHNLREVYLSNNKFDTFPEALCELPAMEKLYI 294
Query: 207 SHNQLTEF 214
+N +T
Sbjct: 295 RNNNITRI 302
>gi|187953911|gb|AAI38423.1| Lrig2 protein [Mus musculus]
Length = 1047
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 6/210 (2%)
Query: 35 KGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
+ TP + L LV+N I I+ AF + L + N ++ + S L +L L+N
Sbjct: 116 EPTPNITLLSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRMSLKYLNLSN 175
Query: 93 NRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LR 149
NR+ +LE G LS L+V + +N++ +P + L L NRI ++GL +
Sbjct: 176 NRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQ 235
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSH 208
GL L+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S
Sbjct: 236 GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQ 295
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N + + D +RL +DLSYN++ +
Sbjct: 296 NAIEKISPDAWEFCQRLSELDLSYNQLTRL 325
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 239 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAI 298
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 299 EKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 358
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN I+ + + SGL L L L N++ GL+ L +DL+
Sbjct: 359 NLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNN 418
Query: 233 NKI 235
N I
Sbjct: 419 NAI 421
>gi|443723517|gb|ELU11894.1| hypothetical protein CAPTEDRAFT_221265 [Capitella teleta]
Length = 1117
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 37/248 (14%)
Query: 25 GSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRG 81
G ++ L G P L TL +N IT ++ + P + L + FN ++ L S
Sbjct: 96 GISEISRGSLDGMPNLNTLH--HNEITALNASLLELMPFLHILDLNFNQISLLQATSFPF 153
Query: 82 LTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD---------------- 124
L +L+ LFLN+NRL+ +E L L L+ L +++N+LE +P D
Sbjct: 154 LPNLHQLFLNSNRLQRIEANSLDNLPALEWLKLKKNRLEVIPKDLFAKTNHLKYLELSRN 213
Query: 125 -IQLFSQLG--------SLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
I++ LG SL N I+ L DG GL K+Q+ +D+N I+ V +
Sbjct: 214 RIRILEGLGFSGLRNLLSLKMRRNSISQLLDGAFYGLDKIQILQLDYNNISSVSKGWLYG 273
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLY---LSHNQLTEFLLDDIRGLKRLRTVDLS 231
L +L +SL +NQ+T + G ++L+ L+HN + ++ +GL+ L+ + L+
Sbjct: 274 LTSLQQLSLSHNQVTHVEE--GGWDSCSHLWQLDLTHNNIVSIMMASFKGLESLQYLLLN 331
Query: 232 YNKINKFG 239
+NK++
Sbjct: 332 HNKVSSIA 339
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTS-LNNSLRGLTDLNWLFL 90
L G +L L L +N +TH+ E + + +L + NN+ S + S +GL L +L L
Sbjct: 271 LYGLTSLQQLSLSHNQVTHVEEGGWDSCSHLWQLDLTHNNIVSIMMASFKGLESLQYLLL 330
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
N+N++ S+ EG L L LQ+L + N++ +A I G+
Sbjct: 331 NHNKVSSIAEGALKELPSLQVLELSHNEIS---------------WA----IEDSSGVFD 371
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
GL L ++D NQI + + F L L + L N ITS+ S
Sbjct: 372 GLVSLTRLSLDSNQIKSLSKQTFVGLAQLRLLRLVENPITSIQS 415
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 27/183 (14%)
Query: 56 NAFPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE 114
+ FP L V N LT L+ NSL GL+ L L LNNN + I
Sbjct: 57 DTFPEWTDTLDVSSNKLTELSPNSLNGLSRLTELNLNNNGISE---------------IS 101
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQ 173
+ L+ +P+ L +L+ +N IT+L+ LL + L + +++FNQI++++ F
Sbjct: 102 RGSLDGMPN-------LNTLH--HNEITALNASLLELMPFLHILDLNFNQISLLQATSFP 152
Query: 174 NLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
L NL + L +N++ + + SL L L +L L N+L D L+ ++LS
Sbjct: 153 FLPNLHQLFLNSNRLQRIEANSLDNLPALEWLKLKKNRLEVIPKDLFAKTNHLKYLELSR 212
Query: 233 NKI 235
N+I
Sbjct: 213 NRI 215
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLK 96
L++L + N+I+ + + AF I+ L + +NN++S++ L GLT L L L++N++
Sbjct: 229 LLSLKMRRNSISQLLDGAFYGLDKIQILQLDYNNISSVSKGWLYGLTSLQQLSLSHNQVT 288
Query: 97 SLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
+E G + S L L + +NN ++ + +GL LQ
Sbjct: 289 HVEEGGWDSCSHLWQLDL----------------------THNNIVSIMMASFKGLESLQ 326
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQL 211
++ N+++ + + L +L + L +N+I+ + GL L L L NQ+
Sbjct: 327 YLLLNHNKVSSIAEGALKELPSLQVLELSHNEISWAIEDSSGVFDGLVSLTRLSLDSNQI 386
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
GL +LR + L N I
Sbjct: 387 KSLSKQTFVGLAQLRLLRLVENPI 410
>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 378
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+ + L +L LFL+NN+L + ++G L LQ L + NQL
Sbjct: 164 LQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 223
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L +N++T++ + L KLQ N+D NQ+T + + E L NL +
Sbjct: 224 PKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPK-EIGQLQNLQVL 282
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ ++ L L L L NQLT L +I LK L+ ++L N++
Sbjct: 283 FLSYNQFKTIPVEFGQLKNLKMLSLDANQLTA-LPKEIGKLKNLKMLNLDANQL 335
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L L +R L +L LFLN N+ K+ ++ L L L + NQL L
Sbjct: 72 LQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTIL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN++ ++ + L LQ +D NQ+T + E L NL S+
Sbjct: 132 PVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPK-EIGKLQNLKSL 190
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L L LYLS+NQLT F +I L++L+ + L N++
Sbjct: 191 FLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF-PKEIGKLQKLQWLGLGDNQL 243
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L++N+L L ++ L LQ L + NQ
Sbjct: 46 PLDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQF 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ P +I+ L LY +NN++T L + L LQ N+ NQ+ + + E + L NL
Sbjct: 106 KTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISK-EIEQLKNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+T+ + L L L+LS+NQLT F +I L+ L+ + LS N++ F
Sbjct: 165 QKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF-PKEIGKLQNLQELYLSNNQLTTF 223
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N + + L L+ L+L+NN+L L ++G L LQ L + NQL+ +
Sbjct: 95 LQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTI 154
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I+ L LY +NN++T+ + L L+ + NQ+T + E L NL +
Sbjct: 155 SKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPK-EIGKLQNLQEL 213
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L KL +L L NQLT + ++I L++L+ ++L N++
Sbjct: 214 YLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT-IPNEIGKLQKLQELNLDVNQL 266
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +++ + L +L L+L+NN+L + ++G L L+ L + NQL
Sbjct: 141 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF 200
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ + NQ+T + +E L L +
Sbjct: 201 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI-PNEIGKLQKLQEL 259
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L L L+LS+NQ + + LK L+ + L N++
Sbjct: 260 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPV-EFGQLKNLKMLSLDANQL 312
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 12/189 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L +L L NN +T FP I KL ++ N LT+ + L L WL L +N
Sbjct: 187 LKSLFLSNNQLT-----TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L ++ ++G L KLQ L ++ NQL +P +I L L+ + N+ ++ L
Sbjct: 242 QLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKN 301
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L++ ++D NQ+T + + E L NL ++L NQ+ ++ + L L LYL +NQ +
Sbjct: 302 LKMLSLDANQLTALPK-EIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSI 360
Query: 214 FLLDDIRGL 222
+ IR L
Sbjct: 361 EEKERIRKL 369
>gi|148675623|gb|EDL07570.1| leucine-rich repeats and immunoglobulin-like domains 2, isoform
CRA_b [Mus musculus]
Length = 1060
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Query: 37 TPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
TP + L LV+N I I+ AF + L + N ++ + S L +L L+NNR
Sbjct: 131 TPNITLLSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRMSLKYLNLSNNR 190
Query: 95 LKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGL 151
+ +LE G LS L+V + +N++ +P + L L NRI ++GL +GL
Sbjct: 191 ISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQGL 250
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQ 210
L+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N
Sbjct: 251 DSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNA 310
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + D +RL +DLSYN++ +
Sbjct: 311 IEKISPDAWEFCQRLSELDLSYNQLTRL 338
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 252 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAI 311
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 312 EKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 371
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN I+ + + SGL L L L N++ GL+ L +DL+
Sbjct: 372 NLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNN 431
Query: 233 NKI 235
N I
Sbjct: 432 NAI 434
>gi|260836749|ref|XP_002613368.1| hypothetical protein BRAFLDRAFT_68353 [Branchiostoma floridae]
gi|229298753|gb|EEN69377.1| hypothetical protein BRAFLDRAFT_68353 [Branchiostoma floridae]
Length = 772
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 113/219 (51%), Gaps = 7/219 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNSLRGLTDLN 86
L S G P L +L L +N++T ++ + F P ++ L+VG N +T++ ++
Sbjct: 166 LESAAFGGLPHLTSLYLSSNSLTSLNPSVFKGSPKLKSLNVGDNAITAIGKDAFAGSNFE 225
Query: 87 WLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
L+L+ N + +++ L LQ + ++QN ++ L + QL S+ N++TS++
Sbjct: 226 TLYLSRNAINTVDVDAFSHLKGLQSVSLDQNNIKDLKGVFKDLPQLQSVSVYGNQLTSIE 285
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
G+ + L KL +++ NQI+ + F + + S+S+ +N I + S + L L +
Sbjct: 286 GVFQNLPKLDSLSLNGNQISKISSTTFDGVSAITSLSISSNVIEEVESGAFRNLDSLQTI 345
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE 243
Y+ +NQ+ E L GL+ L T+ + N + F T E
Sbjct: 346 YIDNNQIPEISL---AGLQSLMTLYIDSNNLQSFPTNLE 381
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLN 86
++S G A+ +L + +N I + AF +++ +++ N + + SL GL L
Sbjct: 307 ISSTTFDGVSAITSLSISSNVIEEVESGAFRNLDSLQTIYIDNNQIPEI--SLAGLQSLM 364
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL-EALPSDIQLFSQLGSLYANNNRITSLD 145
L++++N L+S L ++L+ L + N + E L + +L SLY +N L
Sbjct: 365 TLYIDSNNLQSFPTNLEDANQLESLSLNNNPIKEPLEEQFSVLHRLSSLYLSNITSLKLA 424
Query: 146 GLLR-----GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 199
G L G L ++ N + + F+ + +I L NN +T ++ L GLT
Sbjct: 425 GTLHPKALCGSEALDDVWLNNNGLASIPPTTFECTPFISTIWLSNNNLTELSPRLFHGLT 484
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+L ++ LS NQL+ D GL +LR++ LS N
Sbjct: 485 ELNWIDLSDNQLSHLDPDTFMGLDKLRSLSLSGN 518
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNR 94
P L +L L N I+ I F I L + N + + + + R L L ++++NN+
Sbjct: 292 PKLDSLSLNGNQISKISSTTFDGVSAITSLSISSNVIEEVESGAFRNLDSLQTIYIDNNQ 351
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT-SLD---GLLRG 150
+ E L L L L I+ N L++ P++++ +QL SL NNN I L+ +L
Sbjct: 352 IP--EISLAGLQSLMTLYIDSNNLQSFPTNLEDANQLESLSLNNNPIKEPLEEQFSVLHR 409
Query: 151 LTKLQVFNMDFNQIT-MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LAYLYLSH 208
L+ L + N+ ++ + LD + L NN + S+ + T ++ ++LS+
Sbjct: 410 LSSLYLSNITSLKLAGTLHPKALCGSEALDDVWLNNNGLASIPPTTFECTPFISTIWLSN 469
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
N LTE GL L +DLS N+++
Sbjct: 470 NNLTELSPRLFHGLTELNWIDLSDNQLS 497
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 43/216 (19%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK-S 97
+L T+ + NN I I ++ L++ NNL S +L L L LNNN +K
Sbjct: 341 SLQTIYIDNNQIPEISLAGLQ-SLMTLYIDSNNLQSFPTNLEDANQLESLSLNNNPIKEP 399
Query: 98 LEGQLGTLSKLQLLVIEQ----------------------------NQLEALP-SDIQLF 128
LE Q L +L L + N L ++P + +
Sbjct: 400 LEEQFSVLHRLSSLYLSNITSLKLAGTLHPKALCGSEALDDVWLNNNGLASIPPTTFECT 459
Query: 129 SQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
+ +++ +NN +T L L GLT+L ++ NQ++ + D F L L S+SL N
Sbjct: 460 PFISTIWLSNNNLTELSPRLFHGLTELNWIDLSDNQLSHLDPDTFMGLDKLRSLSLSGNN 519
Query: 188 ITSMNSSLSGLTKL-----------AYLYLSHNQLT 212
T+M + L ++YL H+
Sbjct: 520 FTNMAHVAPAIANLPILLYQTLDDNPFVYLGHDSFA 555
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNS----LRGLTDLN-WLFLNNNRLKSLE-GQL 102
NIT I + P L + F +T L + L LN W LN L +E G
Sbjct: 44 NITAIPRD-IPKNTTMLDISFTPITMLRKGDFVDMPKLKQLNVWWNLN---LTMVELGTF 99
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---ANNNRITSLD-GLLRGLTKLQVFN 158
L + L + N LP+ LF L +L A+N+++ + GL LQ
Sbjct: 100 DNLPTITSLGLFNNSFTKLPTG--LFDSLKNLKTFDAHNSKLEMIQHGLFTDHPTLQEIR 157
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLD 217
+ FN I + F L +L S+ L +N +TS+N S+ G KL L + N +T D
Sbjct: 158 LFFNNIAELESAAFGGLPHLTSLYLSSNSLTSLNPSVFKGSPKLKSLNVGDNAITAIGKD 217
Query: 218 DIRGLKRLRTVDLSYNKIN 236
G T+ LS N IN
Sbjct: 218 AFAG-SNFETLYLSRNAIN 235
>gi|410939257|ref|ZP_11371091.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410785676|gb|EKR74633.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 288
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 2/180 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N +T+L + + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIEWNKLKTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELTKLPQ-EIKNLEGLIEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +NQ T++ + L L L L NQL L +I LK L+ + L N++ K +
Sbjct: 194 YLHDNQFTTLPKEIGNLKNLHNLVLGRNQLIS-LPPEIGNLKNLKELYLEENQLTKLPKQ 252
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E+N L+ LP +I L L N N IT+L + L LQV +++ N++ + + E
Sbjct: 58 EENPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPK-EIG 116
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
NL NL +S++ N++ ++ + L L LYLS NQL + L +I LK+L+ + LS N
Sbjct: 117 NLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQL-KVLPQEIWNLKKLQRIHLSTN 175
Query: 234 KINKF 238
++ K
Sbjct: 176 ELTKL 180
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N L +L + L +L L+L+ N+LK L ++ L KLQ + + N+L L
Sbjct: 121 LKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELTKL 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +Y ++N+ T+L + L L + NQ+ + E NL NL +
Sbjct: 181 PQEIKNLEGLIEIYLHDNQFTTLPKEIGNLKNLHNLVLGRNQLISLP-PEIGNLKNLKEL 239
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
L+ NQ+T + ++ L +L L L NQ F ++ +KRL
Sbjct: 240 YLEENQLTKLPKQIADLKQLERLSLEGNQ---FPSEEKERIKRL 280
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L LN N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L I L N++T
Sbjct: 120 NLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQ-EIWNLKKLQRIHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK L + L N++
Sbjct: 179 KLPQEIKNLEGLIEIYLHDNQFTT-LPKEIGNLKNLHNLVLGRNQL 223
>gi|405968548|gb|EKC33612.1| hypothetical protein CGI_10017764 [Crassostrea gigas]
Length = 799
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 109/198 (55%), Gaps = 5/198 (2%)
Query: 45 LVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L +N IT + A P I+K+++ N +T + ++ L+ L WL L++N ++ + Q+G
Sbjct: 185 LSDNRITEMPTAAVKKPNIQKINLARNGVTLIPENIDKLSRLTWLDLSHNAVQEIPAQIG 244
Query: 104 TLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
+ L L + N ++ LP +I L L L ++N I L ++ L KL F++ N
Sbjct: 245 GVRFLHYLNLSHNHIKTLPEEICNLGYALDHLDISHNEIPVLPDGMKSLRKLTYFDVSNN 304
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
++ + + + L L ++ + N++ SM ++ L +L +LYLS N + E + ++I +
Sbjct: 305 EVEYLP-ESIRELPCLTTLGVSQNKLMSMKFAVY-LKQLEHLYLSRNSI-EVIPEEIDHM 361
Query: 223 KRLRTVDLSYNKINKFGT 240
K L T+DLS+NKI + +
Sbjct: 362 KSLVTLDLSWNKIKELPS 379
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 62 IRKLHVGF----NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ 117
I +L + F N L L S+ L +L + + NN L + G + + KL++L+I+ N
Sbjct: 64 ISQLAIKFTAENNRLKRLPKSIAALENLEHIDITNNTLSAFPGSVSRMKKLEVLIIKNNA 123
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
++ LP I + L LYA+NN+I +L + G + ++ N I +++ ++
Sbjct: 124 IKKLPPAIHKCTGLQKLYASNNKIRALPKSI-GKASISYMDVSSNMIRSIKKGLYEMTAE 182
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+D L +N+IT M ++ + + L+ N +T + ++I L RL +DLS+N + +
Sbjct: 183 VD---LSDNRITEMPTAAVKKPNIQKINLARNGVT-LIPENIDKLSRLTWLDLSHNAVQE 238
Query: 238 FGTRNEG 244
+ G
Sbjct: 239 IPAQIGG 245
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 49 NITHIHENAFPPTI-------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
N++H H P I L + N + L + ++ L L + ++NN ++ L
Sbjct: 253 NLSHNHIKTLPEEICNLGYALDHLDISHNEIPVLPDGMKSLRKLTYFDVSNNEVEYLPES 312
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+ L L L + QN+L ++ + L QL LY + N I + + + L ++ +
Sbjct: 313 IRELPCLTTLGVSQNKLMSMKFAVYL-KQLEHLYLSRNSIEVIPEEIDHMKSLVTLDLSW 371
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N+I + N+ +L S+++ N+++++ SL L +L LSHN+LT L D+R
Sbjct: 372 NKIKEL-PSSIGNVKSLKSLNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLT-VLPSDLRK 429
Query: 222 LKRLRTVDLSYNKI 235
L+ L T +S+N+I
Sbjct: 430 LRNLETFHVSHNEI 443
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 95/183 (51%), Gaps = 6/183 (3%)
Query: 57 AFPPTIRKLHVGFNNLTS--LNNSLRGLTDLNW-LFLNNNRLKSLEGQLGTLSKLQLLVI 113
A P +I K + + +++S + + +GL ++ + L++NR+ + +Q + +
Sbjct: 149 ALPKSIGKASISYMDVSSNMIRSIKKGLYEMTAEVDLSDNRITEMPTAAVKKPNIQKINL 208
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
+N + +P +I S+L L ++N + + + G+ L N+ N I + +E
Sbjct: 209 ARNGVTLIPENIDKLSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHNHIKTLP-EEIC 267
Query: 174 NL-HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL + LD + + +N+I + + L KL Y +S+N++ E+L + IR L L T+ +S
Sbjct: 268 NLGYALDHLDISHNEIPVLPDGMKSLRKLTYFDVSNNEV-EYLPESIRELPCLTTLGVSQ 326
Query: 233 NKI 235
NK+
Sbjct: 327 NKL 329
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Query: 28 PLTSDDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLN 86
P+ D +K L + NN + ++ E+ P + L V N L S+ ++ L L
Sbjct: 284 PVLPDGMKSLRKLTYFDVSNNEVEYLPESIRELPCLTTLGVSQNKLMSMKFAVY-LKQLE 342
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L+L+ N ++ + ++ + L L + N+++ LPS I L SL N+++++
Sbjct: 343 HLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNVKSLKSLNVCGNKLSAIPD 402
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
L L ++ N++T++ D + L NL++ + +N+I M S+ L +L L +
Sbjct: 403 SLGHGQVLTFLDLSHNRLTVLPSD-LRKLRNLETFHVSHNEIALMPKSIDFLYQLRSLDV 461
Query: 207 SHNQLTEF 214
S N L E
Sbjct: 462 SKNGLNEL 469
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
S+ L L L L+NN LK+L + + L + N++ ALP I +L L+ +
Sbjct: 524 SVFNLRCLKHLDLSNNALKTLTDNVCKMRGLVSITACHNEITALPEKISALKKLEKLHVS 583
Query: 138 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLS 196
NN +TS L L L NM N+IT++ D F +L+ L ++ L N++ + +
Sbjct: 584 NNGLTSFSPSLGRLVSLCDLNMSNNKITLL-PDNFGDLNKLINMDLSENELLNFPKDQID 642
Query: 197 GLTKLAYLYLSHNQLTEFLLD 217
L L +L +S N + + ++
Sbjct: 643 VLASLLHLNISKNHIDQMPIE 663
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 20/213 (9%)
Query: 1 MSRFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP 60
+ + +YF+ V+ N ++ PE+ ++ P L TL + N + + +
Sbjct: 293 LRKLTYFD----VSNNEVEYLPES---------IRELPCLTTLGVSQNKLMSMKFAVYLK 339
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ L++ N++ + + + L L L+ N++K L +G + L+ L + N+L A
Sbjct: 340 QLEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNVKSLKSLNVCGNKLSA 399
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P + L L ++NR+T L LR L L+ F++ N+I ++ + L+ L S
Sbjct: 400 IPDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETFHVSHNEIALMPK-SIDFLYQLRS 458
Query: 181 ISLQNNQITSMNSSLSGLTK-LAYLYLSHNQLT 212
+ + N + +N L K L +L +S N L+
Sbjct: 459 LDVSKNGLNELN-----LPKTLTHLNMSDNPLS 486
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
Query: 56 NAFPPTIRKLHVGFNNLTSLNNSLRGLTD-------LNWLFLNNNRLKSLEGQLGTLSKL 108
+ PP++ L +L NN+L+ LTD L + +N + +L ++ L KL
Sbjct: 519 DEIPPSVFNLRC-LKHLDLSNNALKTLTDNVCKMRGLVSITACHNEITALPEKISALKKL 577
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L + N L + + L L +NN+IT L L KL ++ N++
Sbjct: 578 EKLHVSNNGLTSFSPSLGRLVSLCDLNMSNNKITLLPDNFGDLNKLINMDLSENELLNFP 637
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+D+ L +L +++ N I M L +L L + N L + + D+ +K L +
Sbjct: 638 KDQIDVLASLLHLNISKNHIDQMPIEFPYLYRLKVLRAASNDL-KSIPSDMDKMKSLEVL 696
Query: 229 DLSYNKINKFGTR 241
D+S N I +
Sbjct: 697 DISDNIIESLPEK 709
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 48/193 (24%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
+D++ L+++ +N IT + E + KLHV N LTS + SL L L L
Sbjct: 545 TDNVCKMRGLVSITACHNEITALPEKISALKKLEKLHVSNNGLTSFSPSLGRLVSLCDLN 604
Query: 90 LNNNRLKSLEGQLGTLSKL----------------------------------------- 108
++NN++ L G L+KL
Sbjct: 605 MSNNKITLLPDNFGDLNKLINMDLSENELLNFPKDQIDVLASLLHLNISKNHIDQMPIEF 664
Query: 109 ------QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
++L N L+++PSD+ L L ++N I SL + + +L+ N+ N
Sbjct: 665 PYLYRLKVLRAASNDLKSIPSDMDKMKSLEVLDISDNIIESLPEKICKMPELKEINVSEN 724
Query: 163 QITMVRRDEFQNL 175
+IT ++NL
Sbjct: 725 KITRGWPKAWENL 737
>gi|380011078|ref|XP_003689640.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis florea]
Length = 610
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ +L + +N+T L +++R LT L +L N+L +L ++G L L+ L + +N L +
Sbjct: 130 CLERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTS 189
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ ++ L L +N+++ + ++ LT L + FN++ V D +NL NL
Sbjct: 190 LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYV-SDNIRNLTNLTM 248
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL+ N+I + + + L L +SHN L E L ++I +L T+DL +N++
Sbjct: 249 LSLRENKIRELPAGIGKLINLITFDVSHNHL-EHLPEEIGNCVQLSTLDLQHNEL 302
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N LT + + ++ L +L L L+NN LK + + L KL++L +E+N++E+LP+
Sbjct: 435 ELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPN 494
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +N++TSL + LT L ++ N + + +E L NLDS+ +
Sbjct: 495 EIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL-PEEIGTLENLDSLYV 553
Query: 184 QNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+N + ++ L+ T L+ + + + L++ + + G
Sbjct: 554 NDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAG 592
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N LT++ SL ++ + N++ L +G L +LS L + + +N
Sbjct: 314 SLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFT 373
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
A PS F+ + S+ +N+I + G+ L NM NQ+T + D N
Sbjct: 374 AYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLD-IGTWIN 432
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+T + + L L L LS+N L + + I L++LR +DL NKI
Sbjct: 433 MVELNLGTNQLTKIPDDIQCLQNLEVLILSNN-LLKRIPASIANLRKLRVLDLEENKI 489
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L + ++ PA I L L+ +++H H P I L + N L + +++
Sbjct: 251 LRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIG 310
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 139
L L L L NRL ++ L + +E NQ+ LP + S L ++ + N
Sbjct: 311 NLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRN 370
Query: 140 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
T+ G T + N++ N+I + F NL ++++ NQ+T++ +
Sbjct: 371 AFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLDIGTW 430
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L NQLT+ + DDI+ L+ L + LS N + +
Sbjct: 431 INMVELNLGTNQLTK-IPDDIQCLQNLEVLILSNNLLKRI 469
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 15 LNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV---GFNN 71
+N+++L T DD++ L L+L NN + I A +RKL V N
Sbjct: 431 INMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIP--ASIANLRKLRVLDLEENK 488
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
+ SL N + L DL L L +N++ SL +G L+ L L + +N L LP +I L
Sbjct: 489 IESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENL 548
Query: 132 GSLYANNN 139
SLY N+N
Sbjct: 549 DSLYVNDN 556
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 44/260 (16%)
Query: 17 LIDLEPETG----------------SHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP 60
L+ L PE G S P T ++LK +L L L +N ++ I + +
Sbjct: 164 LVTLPPEIGCLGNLETLALSENSLTSLPNTLENLK---SLRVLDLRHNKLSEIPDVVYKL 220
Query: 61 T-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
T + L + FN + +++++R LT+L L L N+++ L +G L L + N LE
Sbjct: 221 TNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLE 280
Query: 120 ALPSDIQLFSQLGSLYANNN-----------------------RITSLDGLLRGLTKLQV 156
LP +I QL +L +N R+T++ L +
Sbjct: 281 HLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDE 340
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFL 215
F+++ NQ++ + +L +L +I+L N T+ S + T + + L HN++ +
Sbjct: 341 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIP 400
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
K L +++ N++
Sbjct: 401 YGIFSRAKNLAKLNMKENQL 420
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 25/164 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ N LT+L + ++ L L N+L + + L L++L++ N L+ +
Sbjct: 410 LAKLNMKENQLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRI 469
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I AN L KL+V +++ N+I + +E L +L +
Sbjct: 470 PASI----------AN-------------LRKLRVLDLEENKIESL-PNEIGFLRDLQKL 505
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
LQ+NQ+TS+ ++ LT L YL + N L +L ++I L+ L
Sbjct: 506 ILQSNQVTSLPRAIGHLTNLTYLSVGENNLN-YLPEEIGTLENL 548
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L + ++ + LPS ++ + L Y N++ +L + L L+ + N +T +
Sbjct: 131 LERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSL 190
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ +NL +L + L++N+++ + + LT L L+L N++ ++ D+IR L L
Sbjct: 191 P-NTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRV-RYVSDNIRNLTNLTM 248
Query: 228 VDLSYNKINKF 238
+ L NKI +
Sbjct: 249 LSLRENKIREL 259
>gi|320163290|gb|EFW40189.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 830
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 113/232 (48%), Gaps = 34/232 (14%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRL 95
AL TL L NN +T I NAF + LH+ +N LTS++ N+ GL+ L+ L+LNNN
Sbjct: 253 ALHTLTLENNLLTSISANAFSGLSALTWLHLAYNRLTSISANAFSGLSALSSLYLNNNPC 312
Query: 96 KSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLDG------- 146
++ + L+ L+ L + NQL ++ ++ + + L LY NNRI S
Sbjct: 313 TAIAAEAFNGLTSLKSLTLVANQLTSISANAFVGLNALTYLYLQNNRIVSFSADAFTGLP 372
Query: 147 ------------------LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
GLTKL +D NQIT + + F L L + L +N+I
Sbjct: 373 VLIYLDIYSNPITSIPSNAFTGLTKLVFLRLDTNQITSISANAFTELSALRGLWLHSNRI 432
Query: 189 TSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
T++++ + GLT L L L+ N LT +GL ++ LSY+ N +G
Sbjct: 433 TTLSANAFIGLTALTNLPLNDNPLTTTPPGLFKGLP--NSLFLSYSS-NSYG 481
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
L+++ PAL +L L +N +T I ENAF + L + N LT++ N+ GL L
Sbjct: 99 LSANAFPHLPALTSLSLTDNQLTTIPENAFAGLGALTNLDLTENQLTTIPENAFAGLGAL 158
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L L +N++ S+ L+ L L++ N + +P + + + L L N ITS
Sbjct: 159 TNLQLPSNKIVSMAAISFTGLAGLTTLIMNNNLVTTIPENALPGLAALEVLDLRYNSITS 218
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ G GL L+ ++ N + NL L +++L+NN +TS+++ + SGL+ L
Sbjct: 219 VSGNAFAGLLSLRSLDISANAFAGLTALTLFNLTALHTLTLENNLLTSISANAFSGLSAL 278
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+L+L++N+LT + GL L ++ L+ N
Sbjct: 279 TWLHLAYNRLTSISANAFSGLSALSSLYLNNNPCTAIAAE 318
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 27/204 (13%)
Query: 39 ALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRL 95
AL +L LV+ IT + NAF + +L++ N L+++ S GLT L L L++N +
Sbjct: 37 ALESLSLVSGQITSVSPNAFAGLVALTELNLRRNPLSAVPTSAFTGLTALQRLNLDHNEI 96
Query: 96 KSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
+L L L L + NQL +P + F+ LG+L T+LD LT+
Sbjct: 97 TTLSANAFPHLPALTSLSLTDNQLTTIPENA--FAGLGAL-------TNLD-----LTE- 141
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTE 213
NQ+T + + F L L ++ L +N+I SM + S +GL L L +++N +T
Sbjct: 142 -------NQLTTIPENAFAGLGALTNLQLPSNKIVSMAAISFTGLAGLTTLIMNNNLVTT 194
Query: 214 FLLDDIRGLKRLRTVDLSYNKINK 237
+ + GL L +DL YN I
Sbjct: 195 IPENALPGLAALEVLDLRYNSITS 218
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL----LRGLTKL 154
G L+ L+ L + Q+ ++ + F+ L +L N R L + GLT L
Sbjct: 29 AGTFANLTALESLSLVSGQITSVSPNA--FAGLVALTELNLRRNPLSAVPTSAFTGLTAL 86
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTE 213
Q N+D N+IT + + F +L L S+SL +NQ+T++ ++ +GL L L L+ NQLT
Sbjct: 87 QRLNLDHNEITTLSANAFPHLPALTSLSLTDNQLTTIPENAFAGLGALTNLDLTENQLTT 146
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
+ GL L + L NKI
Sbjct: 147 IPENAFAGLGALTNLQLPSNKI 168
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLT 199
IT++ G + T F++ F IT + F NL L+S+SL + QITS++ + +GL
Sbjct: 3 ITAIPGGIP--TNTTQFDLYFTDITSIPAGTFANLTALESLSLVSGQITSVSPNAFAGLV 60
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L L N L+ GL L+ ++L +N+I
Sbjct: 61 ALTELNLRRNPLSAVPTSAFTGLTALQRLNLDHNEI 96
>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 938
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L TL L +N IT P I +L + +N +T+L +++ L +L L L+ N
Sbjct: 73 LSTLYLSHNGIT-----TLPDAIAQLQNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVN 127
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
++ +L + L L L + N++ LP I L SL N NRIT+L + L
Sbjct: 128 KITTLPDAIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHN 187
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L ++ N+IT + D LHNL S+SL NN IT++ +++ L L L LS N++T
Sbjct: 188 LTSLDLSGNRITTL-PDAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITT 246
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
L D I L+ L T+DL N+I
Sbjct: 247 -LPDAIAKLQNLSTLDLRGNEI 267
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 94/186 (50%), Gaps = 8/186 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
P I KLH + N +T+L +++ L +L L L+ NR+++L + L L L
Sbjct: 109 LPDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSL 168
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N++ LP I L SL + NRIT+L + L L ++ N IT + D
Sbjct: 169 NLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLHNLTSLSLWNNGITTLP-DA 227
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
LHNL S+ L N+IT++ +++ L L+ L L N++T L D I L L ++DL
Sbjct: 228 IAKLHNLTSLDLSGNRITTLPDAIAKLQNLSTLDLRGNEITT-LPDAIAQLHNLTSLDLR 286
Query: 232 YNKINK 237
N I K
Sbjct: 287 RNPIEK 292
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Query: 48 NNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
+ +T I F T + +L + N +T+L +++ L +L+ L+L++N + +L + L
Sbjct: 35 DKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQLQ 94
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
L L + N + LP I L +L + N+IT+L + L L N+ N+I
Sbjct: 95 NLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRT 154
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ D LHNL S++L N+IT++ +++ L L L LS N++T L D I L L
Sbjct: 155 L-PDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGNRITT-LPDAIAKLHNLT 212
Query: 227 TVDLSYNKI 235
++ L N I
Sbjct: 213 SLSLWNNGI 221
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
+W + ++L + ++ L+ L+ L + +N++ LP I L +LY ++N IT+L
Sbjct: 28 DWGTPDKDKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLP 87
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
+ L L ++ +N IT + D LHNL +++L N+IT++ +++ L L L
Sbjct: 88 DAIAQLQNLNSLDLSYNGITTL-PDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLN 146
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LS N++ L D I L L +++L+ N+I
Sbjct: 147 LSVNRI-RTLPDAIAKLHNLTSLNLNGNRI 175
>gi|257061785|ref|YP_003139673.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
gi|256591951|gb|ACV02838.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
Length = 937
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 57 AFPPTIRKL--HVGF-----NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ PP I +L H+ F N L +L + L LN LFL N L+ L ++G LS L
Sbjct: 32 SLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLNALFLTTNYLEELPPEIGNLSTLH 91
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + +N+L LP + L LY NN++ SL L L+ ++ NQ+T++
Sbjct: 92 RLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLL-P 150
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+EF NL L + L++N++ S+N + L +L+ L +S+NQLT L I ++ L ++
Sbjct: 151 EEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLTN-LPPQISEVESLIELN 209
Query: 230 LSYNKI 235
SYN++
Sbjct: 210 ASYNQL 215
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N LT L L L+WL L +N+L+SL ++ L +L L I NQL L
Sbjct: 136 LERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLTNL 195
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L L A+ N++TSL G L L+ L + N+ N+I + R E L NL+++
Sbjct: 196 PPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSHNKIEKLPR-EIGQLKNLNTL 254
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+L N + + S + L++L L LSHN L + +I L++L T+ L YNK+ T
Sbjct: 255 NLIYNNLYYLPSEIGELSQLIDLRLSHNYLDN-IPSEIEKLRKLTTLYLGYNKLKILPT 312
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query: 49 NITHIHENAFPPTIRK------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
NI++ PP I + L+ +N LTSL L L++L+ L L++N+++ L ++
Sbjct: 186 NISYNQLTNLPPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSHNKIEKLPREI 245
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L L L + N L LPS+I SQL L ++N + ++ + L KL + +N
Sbjct: 246 GQLKNLNTLNLIYNNLYYLPSEIGELSQLIDLRLSHNYLDNIPSEIEKLRKLTTLYLGYN 305
Query: 163 QITMV 167
++ ++
Sbjct: 306 KLKIL 310
>gi|421122075|ref|ZP_15582361.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410344842|gb|EKO95985.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 348
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 6/206 (2%)
Query: 26 SHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTD 84
S P+ +LK L L L N I+ + ++ + P ++ L++ N + + L +
Sbjct: 101 SLPVEIGNLKN---LEILTLYGNQISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQN 157
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L WL + N+LK L +LG L L +L + N+L+ LPS F L SL N NR
Sbjct: 158 LEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVF 217
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
L L KL+ + NQ T + +E NL NL+S+ L+ N++ + ++ L L L
Sbjct: 218 PKELISLKKLETLELTGNQFTFL-PEEIGNLSNLNSLFLEANRLKQLPQNIGKLQNLESL 276
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDL 230
YL NQLT L ++I L+ L+ + L
Sbjct: 277 YLQENQLTT-LPEEIGSLQNLKELYL 301
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP TI KLH +G N ++SL + L +L L LNNN+L SL ++G L L++L
Sbjct: 56 FPKTITKLHNLKELNLGRNQISSLPEEIGELQNLKELDLNNNQLTSLPVEIGNLKNLEIL 115
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ+ LP D L L LY + N+ + L L+ + NQ+ + ++
Sbjct: 116 TLYGNQISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKEL-PEK 174
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL+ + L N++ + SS S L L L++N+ F ++ LK+L T++L+
Sbjct: 175 LGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVF-PKELISLKKLETLELT 233
Query: 232 YNKI 235
N+
Sbjct: 234 GNQF 237
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R+L + +L S + L +L L N LK+ + L L+ L + +NQ+
Sbjct: 17 PNLVRELALDSFDLKSFTEEIVKLQNLERLIFNGKNLKNFPKTITKLHNLKELNLGRNQI 76
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR--------- 169
+LP +I L L NNN++TSL + L L++ + NQI+++ +
Sbjct: 77 SSLPEEIGELQNLKELDLNNNQLTSLPVEIGNLKNLEILTLYGNQISVLPKDFSLPQNLK 136
Query: 170 -------------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
DE L NL+ + NQ+ + L L L LYL N+L + L
Sbjct: 137 ILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNEL-KVLP 195
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+ L++++L+YN+ F
Sbjct: 196 SSFSEFRSLKSLNLNYNRFQVF 217
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
LKS ++ L L+ L+ L+ P I L L N+I+SL + L L
Sbjct: 30 LKSFTEEIVKLQNLERLIFNGKNLKNFPKTITKLHNLKELNLGRNQISSLPEEIGELQNL 89
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ +++ NQ+T + E NL NL+ ++L NQI+ + S L LYLS N+ +F
Sbjct: 90 KELDLNNNQLTSLPV-EIGNLKNLEILTLYGNQISVLPKDFSLPQNLKILYLSQNKFRKF 148
Query: 215 LLDDIRGLKRLRTVDLSYNKINKFGTR 241
D+I L+ L +D S N++ + +
Sbjct: 149 -PDEILQLQNLEWLDFSENQLKELPEK 174
>gi|456822481|gb|EMF70951.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 214
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L NN+L +L ++ L LQ+L + +NQL
Sbjct: 43 PLDVRILNLSEQKLTTLPKEIGQLKNLQELNLWNNQLITLPKEIAQLKNLQVLYLSENQL 102
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I +L LY N N++T++ + L LQV + +NQ + EF L NL
Sbjct: 103 MTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPV-EFGQLKNL 161
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
++L NQ+T++ + L L LYL +NQ + I KR+R +
Sbjct: 162 QELNLDANQLTTIPKEIGQLQNLQILYLRNNQFS------IEEKKRIRKL 205
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 47 NNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N IT E A ++ L++ N L +L + L L L+LN N+L ++ ++ L
Sbjct: 77 NQLITLPKEIAQLKNLQVLYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQ 136
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
LQ+L + NQ + +P + F QL + LQ N+D NQ+T
Sbjct: 137 NLQVLFLSYNQFKTIPVE---FGQLKN--------------------LQELNLDANQLTT 173
Query: 167 VRRDEFQNLHNLDSISLQNNQIT 189
+ + E L NL + L+NNQ +
Sbjct: 174 IPK-EIGQLQNLQILYLRNNQFS 195
>gi|68299752|ref|NP_001020238.1| leucine-rich repeats and immunoglobulin-like domains protein 2
precursor [Mus musculus]
gi|73621175|sp|Q52KR2.1|LRIG2_MOUSE RecName: Full=Leucine-rich repeats and immunoglobulin-like domains
protein 2; Short=LIG-2; Flags: Precursor
gi|62739281|gb|AAH94228.1| Leucine-rich repeats and immunoglobulin-like domains 2 [Mus
musculus]
gi|148675624|gb|EDL07571.1| leucine-rich repeats and immunoglobulin-like domains 2, isoform
CRA_c [Mus musculus]
Length = 1054
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 6/210 (2%)
Query: 35 KGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
+ TP + L LV+N I I+ AF + L + N ++ + S L +L L+N
Sbjct: 116 EPTPNITLLSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRMSLKYLNLSN 175
Query: 93 NRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LR 149
NR+ +LE G LS L+V + +N++ +P + L L NRI ++GL +
Sbjct: 176 NRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQ 235
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSH 208
GL L+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S
Sbjct: 236 GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQ 295
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N + + D +RL +DLSYN++ +
Sbjct: 296 NAIEKISPDAWEFCQRLSELDLSYNQLTRL 325
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 239 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAI 298
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 299 EKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 358
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN I+ + + SGL L L L N++ GL+ L +DL+
Sbjct: 359 NLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNN 418
Query: 233 NKI 235
N I
Sbjct: 419 NAI 421
>gi|432848516|ref|XP_004066384.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oryzias
latipes]
Length = 582
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L S++ L L L+L +N+L+SL ++G LS L L + +N L +LP + +L L
Sbjct: 115 LPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRML 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ LT L + FN+IT V +D +NL L +S++ N+I + +
Sbjct: 175 DLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKD-IRNLSKLTMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 234 IGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N L SL + L+ L L L+ N L SL L +L KL++L + N+L +
Sbjct: 125 LAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREI 184
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ + + L +LY NRIT+++ +R L+KL + ++ N+I + E L NL ++
Sbjct: 185 PAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPA-EIGELCNLITL 243
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ +NQ+ + + T++ L L HN+L + L + I L + + L YN+++
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPETIGNLASINRLGLRYNRLSAI 299
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L + + GL L L L+NN LK L +G L KL+ L +E+N+LE
Sbjct: 403 SMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLEC 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N + + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KLA + + + LT + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLAIMSIENCPLTHLPAQIVAG 563
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ +R L+ L L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L + + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRS-LAKCRELEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+ + LS L L L L+ N + + + ++++ +N INK FG
Sbjct: 316 NNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNHINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L ++ L +N L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
EG L +L L L + +N ++ P FS + S
Sbjct: 300 PRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +N I + G+ L NM NQ+T + D F ++ ++L NQ+ +
Sbjct: 360 LNMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLAKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ GL L L LS+N L + L I L++LR +DL NK+
Sbjct: 419 EDVCGLVSLEVLILSNNLLKK-LPHGIGNLRKLRELDLEENKL 460
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L L N + L DL L L
Sbjct: 419 EDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L+ LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMDFNQIT 165
+KL + +++ +T
Sbjct: 539 LCSKLAIMSIENCPLT 554
>gi|24216022|ref|NP_713503.1| hypothetical protein LA_3323 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075103|ref|YP_005989422.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24197250|gb|AAN50521.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458894|gb|AER03439.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 311
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ +N + ++ + L L L L+NN+L +L ++G L LQ L + N+L L
Sbjct: 97 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +N++T L + L LQ N+ N++T + + E + L NL S+
Sbjct: 157 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK-EIEQLQNLKSL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++NQ+T+ + L L L L NQLT L + I LK L+T+DL N++
Sbjct: 216 DLRSNQLTTFPKEIEQLKNLQVLDLGSNQLT-TLPEGIGQLKNLQTLDLDSNQL 268
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ + L L+ NR K+L ++G L LQ L + +NQL LP +I L
Sbjct: 39 TDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLK 98
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
SL + N+I ++ + L KLQ +D NQ+T + + E L NL S+ L N++T++
Sbjct: 99 SLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ-EIGQLQNLQSLDLSTNRLTTLP 157
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L LYL NQLT L ++I LK L+T++L N++
Sbjct: 158 QEIGHLQNLQDLYLVSNQLT-ILPNEIGQLKNLQTLNLRNNRL 199
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N +L + L +L L LN N+L +L ++G L L+ L + NQ+
Sbjct: 48 PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQI 107
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ +P +I+ +L SL +NN++T+L + L LQ ++ N++T + + E +L NL
Sbjct: 108 KTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQ-EIGHLQNL 166
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L +NQ+T + + + L L L L +N+LT L +I L+ L+++DL N++ F
Sbjct: 167 QDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLT-TLSKEIEQLQNLKSLDLRSNQLTTF 225
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L + L +L L+L +N+L L ++G L LQ L + N+L L
Sbjct: 143 LQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTL 202
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I+ L SL +N++T+ + L LQV ++ NQ+T + Q L NL ++
Sbjct: 203 SKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQ-LKNLQTL 261
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L +NQ+T++ + L L L+L++NQL+ IR L
Sbjct: 262 DLDSNQLTTLPQEIGQLQNLQELFLNNNQLSSQEKKRIRKL 302
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L LV+N +T + +E ++ L++ N LT+L+ + L +L L L +N+L + +
Sbjct: 169 LYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKE 228
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+ L LQ+L + NQL LP I L +L ++N++T+L + L LQ ++
Sbjct: 229 IEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNN 288
Query: 162 NQITMVRRDEFQNL 175
NQ++ + + L
Sbjct: 289 NQLSSQEKKRIRKL 302
>gi|449495404|ref|XP_004174702.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
[Taeniopygia guttata]
Length = 1780
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 3/204 (1%)
Query: 33 DLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
D+ L+TL L N + + + +F + +L +G N+L L ++L L +L L+L+
Sbjct: 97 DIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLD 156
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N+L +L +LG L +L L + +N+LE LP+++ L L + N + + + L
Sbjct: 157 RNQLSALPPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLLSQNLLECIPDGIGQL 216
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+L + +D N++T + + + NL + L N +T++ SL L KL L + N+L
Sbjct: 217 KQLSILKVDQNRLTDM-TESIGDCENLSELILTENMLTALPKSLGKLAKLTNLNVDRNRL 275
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
T L +I G L + L N++
Sbjct: 276 TA-LPAEIGGCANLSVLSLRDNRL 298
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F ++ N L+ L L L L LN+ L+SL
Sbjct: 35 LVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLVHLALNDVSLQSL 94
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+G L+ L L + +N L+ LP+ + +L L N + L L L L+
Sbjct: 95 PTDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 154
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + +SGL L L LS N L E + D
Sbjct: 155 LDRNQLSAL-PPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLLSQN-LLECIPDG 212
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 213 IGQLKQLSILKVDQNRL 229
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+++ G AL LLL N + I + + L V N LT + S+ +L+ L L
Sbjct: 188 NEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTDMTESIGDCENLSELIL 247
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 150
N L +L LG L+KL L +++N+L ALP++I + L L +NR+ L L
Sbjct: 248 TENMLTALPKSLGKLAKLTNLNVDRNRLTALPAEIGGCANLSVLSLRDNRLALLPPELAN 307
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
T+L V ++ N++ + NL NL ++ L NQ M
Sbjct: 308 TTELHVLDVAGNRLQNLPF-ALTNL-NLKALWLAENQSQPM 346
>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 631
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L L NRL L ++G L LQ L ++ NQL L
Sbjct: 142 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 201
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + N++T+ + L LQ N+ +N++T + + E L NL+++
Sbjct: 202 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPK-EIGQLKNLENL 260
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NQ+T+ + L KL L L NQLT F +I LK L+ +DL YN+
Sbjct: 261 ELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTF-PKEIGQLKNLQMLDLCYNQ 312
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 85 TFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQT 144
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L ++ NQL LP +I L L NR+T L + L LQ N+ NQ+ +
Sbjct: 145 LNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPV- 203
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL ++ L NQ+T+ + L L L L N+LT L +I LK L ++L
Sbjct: 204 EIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA-LPKEIGQLKNLENLEL 262
Query: 231 SYNKINKF 238
S N++ F
Sbjct: 263 SENQLTTF 270
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N LT+L + L +L L L N+L +L ++G L L L + +NQL
Sbjct: 349 LQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTF 408
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NNR+T+L + L L+ + NQ+T + E L L +
Sbjct: 409 PKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPK-EIGQLKKLQDL 467
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L N++ + + L KL L LS+N+L L +I LK L+ +DL YN+
Sbjct: 468 GLSYNRLVILPKEIGQLEKLQDLGLSYNRLV-ILPKEIGQLKNLQMLDLCYNQ 519
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L +G N LT+ + L +L L L N+ K++ ++G L L
Sbjct: 269 TFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQ 328
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL LP++I +L L N++T+L + L L ++ NQ+T + ++
Sbjct: 329 LNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKE 388
Query: 171 ----------------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
E L NL + L NN++T++ + L L L LS
Sbjct: 389 IGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSE 448
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQLT F +I LK+L+ + LSYN++
Sbjct: 449 NQLTTF-PKEIGQLKKLQDLGLSYNRL 474
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LT+ + L +L L L NNRL +L ++G L L+ L + +NQL P +
Sbjct: 398 LGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKE 457
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +L L + NR+ L + L KLQ + +N++ ++ + E L NL + L
Sbjct: 458 IGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPK-EIGQLKNLQMLDLC 516
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ +++ + L L L LS+NQL L +I LK L +DL N++
Sbjct: 517 YNQFKTVSKEIGQLKNLLQLNLSYNQLA-TLPAEIGQLKNLYNLDLGTNQL 566
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N T+L + L +L L L +N+L + + L KL+ L + +N+L
Sbjct: 47 PLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP++I L L N++ + + L LQ N+ NQ+ + E L NL
Sbjct: 107 VMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPV-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ ++L+ N++T + + L L L L NQL + +I L+ L+T+ LS N++ F
Sbjct: 166 EKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPV-EIGQLQNLQTLGLSENQLTTF 224
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+ + L +L L L NRL +L ++G L L+ L + +NQL
Sbjct: 211 LQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTF 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L N++T+ + L LQ+ ++ +NQ V + E L NL +
Sbjct: 271 PKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSK-EIGQLKNLLQL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+ ++ + + L KL L L NQLT L +I LK L +DL N++
Sbjct: 330 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLT-TLPKEIGQLKNLYNLDLGTNQL 382
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L + L +L L L+ N+L + ++G L KLQ L + N+L L
Sbjct: 418 LQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVIL 477
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I +L L + NR+ L + L LQ+ ++ +NQ V ++
Sbjct: 478 PKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLN 537
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
E L NL ++ L NQ+T++ + L L L L NQLT
Sbjct: 538 LSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLT 590
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +L ++ L LQ L + NQL P+ I +L SL
Sbjct: 40 LTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ NR+ L + L LQ + N++ + E L NL +++LQ+NQ+ ++
Sbjct: 100 DLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPK-EIGQLRNLQTLNLQDNQLATLPVE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L N+LT L +I L+ L+T++L N++
Sbjct: 159 IGQLQNLEKLNLRKNRLT-VLPKEIGQLQNLQTLNLQDNQL 198
>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 633
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L L NRL L ++G L LQ L ++ NQL L
Sbjct: 144 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 203
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + N++T+ + L LQ N+ +N++T + + E L NL+++
Sbjct: 204 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPK-EIGQLKNLENL 262
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NQ+T+ + L KL L L NQLT F +I LK L+ +DL YN+
Sbjct: 263 ELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTF-PKEIGQLKNLQMLDLCYNQ 314
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 87 TFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQT 146
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L ++ NQL LP +I L L NR+T L + L LQ N+ NQ+ +
Sbjct: 147 LNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPV- 205
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL ++ L NQ+T+ + L L L L N+LT L +I LK L ++L
Sbjct: 206 EIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA-LPKEIGQLKNLENLEL 264
Query: 231 SYNKINKF 238
S N++ F
Sbjct: 265 SENQLTTF 272
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N LT+L + L +L L L N+L +L ++G L L L + +NQL
Sbjct: 351 LQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATF 410
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NNR+T+L + L L+ + NQ+T + E L L +
Sbjct: 411 PKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPK-EIGQLKKLQDL 469
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L N++ + + L KL L LS+N+L L +I LK L+ +DL YN+
Sbjct: 470 GLSYNRLVILPKEIGQLEKLQDLGLSYNRLV-ILPKEIGQLKNLQMLDLCYNQ 521
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L +G N LT+ + L +L L L N+ K++ ++G L L
Sbjct: 271 TFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQ 330
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL LP++I +L L N++T+L + L L ++ NQ+T + ++
Sbjct: 331 LNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKE 390
Query: 171 ----------------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
E L NL + L NN++T++ + L L L LS
Sbjct: 391 IGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSE 450
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQLT F +I LK+L+ + LSYN++
Sbjct: 451 NQLTTF-PKEIGQLKKLQDLGLSYNRL 476
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N T+L + L +L L L +N+L + + L KL+ L + +N+L
Sbjct: 49 PLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRL 108
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP++I L L N++ + + L LQ N+ NQ+ + E L NL
Sbjct: 109 VMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPV-EIGQLQNL 167
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ ++L+ N++T + + L L L L NQL + +I L+ L+T+ LS N++ F
Sbjct: 168 EKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPV-EIGQLQNLQTLGLSENQLTTF 226
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+ + L +L L L NRL +L ++G L L+ L + +NQL
Sbjct: 213 LQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTF 272
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L N++T+ + L LQ+ ++ +NQ V + E L NL +
Sbjct: 273 PKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSK-EIGQLKNLLQL 331
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+ ++ + + L KL L L NQLT L +I LK L +DL N++
Sbjct: 332 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLT-TLPKEIGQLKNLYNLDLGTNQL 384
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L + L +L L L+ N+L + ++G L KLQ L + N+L L
Sbjct: 420 LQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVIL 479
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I +L L + NR+ L + L LQ+ ++ +NQ V ++
Sbjct: 480 PKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLN 539
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
E L NL ++ L NQ+T++ + L L L L NQLT
Sbjct: 540 LSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLT 592
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +L ++ L LQ L + NQL P+ I +L SL
Sbjct: 42 LTEALQNPLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESL 101
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ NR+ L + L LQ + N++ + E L NL +++LQ+NQ+ ++
Sbjct: 102 DLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPK-EIGQLRNLQTLNLQDNQLATLPVE 160
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L N+LT L +I L+ L+T++L N++
Sbjct: 161 IGQLQNLEKLNLRKNRLT-VLPKEIGQLQNLQTLNLQDNQL 200
>gi|300797445|ref|NP_001179789.1| leucine-rich repeats and immunoglobulin-like domains protein 2 [Bos
taurus]
gi|296489396|tpg|DAA31509.1| TPA: leucine-rich repeats and immunoglobulin-like domains 2-like
[Bos taurus]
Length = 1065
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ F P + L + N ++ + S L +L L+NNR+
Sbjct: 122 ITLLSLVHNIIPEINAEVFQFYPALETLDLSSNQISEIKTSSFPRMQLKYLNLSNNRITV 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKVVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAVER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAV 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL +++L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSVTKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 33/211 (15%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
+G +L +L + N I+ + + AF + +L + NNLT +N L GL L L++
Sbjct: 235 FQGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYV 294
Query: 91 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGL 147
+ N ++ + +L L + NQL L S S L L +NR+T + DG+
Sbjct: 295 SQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGV 354
Query: 148 LRGLTKLQVFNM---------------------------DFNQITMVRRDEFQNLHNLDS 180
R L+ LQ N+ NQI V + F L +L+
Sbjct: 355 FRFLSNLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSVTKKAFIGLESLEH 414
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I S+ + T+L L L+ N L
Sbjct: 415 LDLNNNAIMSIQENAFSQTRLKELILNTNSL 445
>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
Length = 505
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++G N LTS+ + LT L L L N+L + ++G L+ L+ L ++ NQL +
Sbjct: 97 SLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTS 156
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L N++TSL + LT L ++ NQ+T V E L +L
Sbjct: 157 VPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPA-EIGQLASLKG 215
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+TS+ + + L L L L +NQL +I L L VDLS+N++
Sbjct: 216 LDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASV-PAEIGRLTSLTEVDLSFNRLTSV 272
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTS+ + LT L WL L N+L S+ ++G L+ L+ L++ NQL +
Sbjct: 304 SLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTS 363
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L N N +TS+ + LT L+ + N++T V E L +L
Sbjct: 364 VPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTSVPA-EIGQLTSLQR 422
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L +NQ+T + + + LT L L L+ NQL+ L +I L + +DL N++
Sbjct: 423 LYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSS-LPAEIGQLTSVERLDLRCNELTSV 479
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 22/176 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L +G N LTSL + LT L L L N+L S+ ++G L+ L+ L + NQL +
Sbjct: 166 SLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEIGQLASLKGLDLYNNQLTS 225
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD---------- 170
+P++I + L L +NN++ S+ + LT L ++ FN++T V +
Sbjct: 226 VPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLTEL 285
Query: 171 ------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
E L +L + L NNQ+TS+ + + LT L +L L NQLT
Sbjct: 286 HLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSV 341
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +LH+ N LT + + L L L L+NN+L S+ ++G L+ L+ L + NQL +
Sbjct: 281 SLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTS 340
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L N++TS+ + LT L+ ++ N +T V E L +L
Sbjct: 341 VPAEIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVPA-EIGQLTSLKE 399
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L N++TS+ + + LT L LYL NQLT +I L L + L+ N+++
Sbjct: 400 LYLHGNELTSVPAEIGQLTSLQRLYLGDNQLTRV-PAEIGQLTSLTVLGLNSNQLSSL 456
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L+ L L NN +T + E ++ L +G N LTS+ + L L L L N+L S
Sbjct: 304 SLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTS 363
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ L+ L + N L ++P++I + L LY + N +TS+ + LT LQ
Sbjct: 364 VPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTSVPAEIGQLTSLQRL 423
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ NQ+T V E L +L + L +NQ++S+ + + LT + L L N+LT
Sbjct: 424 YLGDNQLTRVPA-EIGQLTSLTVLGLNSNQLSSLPAEIGQLTSVERLDLRCNELTSV 479
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
Query: 45 LVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L NN +T + E ++ KL + N L S+ + LT L + L+ NRL S+ ++G
Sbjct: 218 LYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIG 277
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L+ L L + N+L +P++I + L L +NN++TS+ + LT L+ + NQ
Sbjct: 278 QLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQ 337
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+T V E L +L+ + L NQ+TS+ + + LT L +L L+ N LT
Sbjct: 338 LTSVPA-EIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSV 387
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL++ N LT + + L L L L+ N+L S+ ++G L+ L L + +N+L +
Sbjct: 120 SLEKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTS 179
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I + L L+ N++TS+ + L L+ ++ NQ+T V E L +L+
Sbjct: 180 LPTEIWQLTSLTCLHLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPA-EIGQLASLEK 238
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+ S+ + + LT L + LS N+LT +I L L + L NK+ +
Sbjct: 239 LRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSV-PAEIGQLTSLTELHLHINKLTRV 295
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N LTS+ + LT L L L N+L SL ++ L+ L L ++ NQL ++
Sbjct: 144 LERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSV 203
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I + L L NN++TS+ + L L+ +D NQ+ V E L +L +
Sbjct: 204 PAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPA-EIGRLTSLTEV 262
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL--LDDIRGLKRLR 226
L N++TS+ + + LT L L+L N+LT + + L RLR
Sbjct: 263 DLSFNRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLASLVRLR 309
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTS+ + LT L WL LN N L S+ ++G L+ L+ L + N+L +
Sbjct: 350 SLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTS 409
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L LY +N++T + + LT L V ++ NQ++ + E L +++
Sbjct: 410 VPAEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPA-EIGQLTSVER 468
Query: 181 ISLQNNQITSMNSSL 195
+ L+ N++TS+ +++
Sbjct: 469 LDLRCNELTSVPAAI 483
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R+L + + LTS+ + LT L L L N+L + ++G L+ L+ L + ++L +
Sbjct: 28 ALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLRLGGSKLTS 87
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L NR+TS+ + LT L+ N+ NQ+T+V E L L+
Sbjct: 88 VPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPA-EIGQLALLER 146
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++L NQ+TS+ + + LT L L L N+LT L +I L L + L N++
Sbjct: 147 LNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTS-LPTEIWQLTSLTCLHLQGNQLTSV 203
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL++ N LT + + L L L L ++L S+ ++G L+ L L + N+L +
Sbjct: 51 SLEKLNLYCNQLTIVPAEIGQLALLERLRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTS 110
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L N++T + + L L+ N+D NQ+T V E L +L
Sbjct: 111 VPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPA-EIGQLTSLTE 169
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L N++TS+ + + LT L L+L NQLT +I L L+ +DL N++
Sbjct: 170 LDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSV-PAEIGQLASLKGLDLYNNQLTSV 226
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 2/180 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L +G ++ + L+ L L L N++L S+ ++G L+ L+ L + NQL +
Sbjct: 6 VEVLGLGSWGPCAVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIV 65
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I + L L +++TS+ + LT L N+ N++T V E L +L+ +
Sbjct: 66 PAEIGQLALLERLRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPA-EIGQLTSLEKL 124
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+L NQ+T + + + L L L L NQLT +I L L +DL NK+ T
Sbjct: 125 NLYCNQLTIVPAEIGQLALLERLNLDGNQLTSV-PAEIGQLTSLTELDLGRNKLTSLPTE 183
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ N LTS+ + LT L L+L +N+L + ++G L+ L +L + NQL +
Sbjct: 396 SLKELYLHGNELTSVPAEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSS 455
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
LP++I + + L N +TS+ +R L F F
Sbjct: 456 LPAEIGQLTSVERLDLRCNELTSVPAAIRELRAAPCFCSLF 496
>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
str. 56601]
gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
str. IPAV]
gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
str. 56601]
gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
str. IPAV]
Length = 633
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L L NRL L ++G L LQ L ++ NQL L
Sbjct: 144 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 203
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + N++T+ + L LQ N+ +N++T + + E L NL+++
Sbjct: 204 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPK-EIGQLKNLENL 262
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NQ+T+ + L KL L L NQLT F +I LK L+ +DL YN+
Sbjct: 263 ELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTF-PKEIGQLKNLQMLDLCYNQ 314
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 87 TFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQT 146
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L ++ NQL LP +I L L NR+T L + L LQ N+ NQ+ +
Sbjct: 147 LNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPV- 205
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL ++ L NQ+T+ + L L L L N+LT L +I LK L ++L
Sbjct: 206 EIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA-LPKEIGQLKNLENLEL 264
Query: 231 SYNKINKF 238
S N++ F
Sbjct: 265 SENQLTTF 272
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L +G N LT+ + L +L L L N+ K++ ++G L L L + NQL L
Sbjct: 282 LRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATL 341
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P++I +L L N++T+L + L L ++ NQ+T + ++
Sbjct: 342 PAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLG 401
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NN++T++ + L L L LS NQLT F +I
Sbjct: 402 LGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTF-PKEI 460
Query: 220 RGLKRLRTVDLSYNKI 235
LK+L+ + LSYN++
Sbjct: 461 GQLKKLQDLGLSYNRL 476
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N T+L + L +L L L +N+L + + L KL+ L + +N+L
Sbjct: 49 PLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRL 108
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP++I L L N++ + + L LQ N+ NQ+ + E L NL
Sbjct: 109 VMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV-EIGQLQNL 167
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ ++L+ N++T + + L L L L NQL + +I L+ L+T+ LS N++ F
Sbjct: 168 EKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPV-EIGQLQNLQTLGLSENQLTTF 226
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+ + L +L L L NRL +L ++G L L+ L + +NQL
Sbjct: 213 LQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTF 272
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L N++T+ + L LQ+ ++ +NQ V + E L NL +
Sbjct: 273 PKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSK-EIGQLKNLLQL 331
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+ ++ + + L KL L L NQLT L +I LK L +DL N++
Sbjct: 332 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLT-TLPKEIGQLKNLYNLDLGTNQL 384
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LT+L + L +L L L N+L + ++G L LQ L + N+L ALP +
Sbjct: 377 LDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKE 436
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L +L + N++T+ + L KLQ + +N++ ++ + E L L + L
Sbjct: 437 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPK-EIGQLEKLQDLGLS 495
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQ 210
N++ + + L L L L +NQ
Sbjct: 496 YNRLVILPKEIGQLKNLQMLDLCYNQ 521
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L + L +L L L+ N+L + ++G L KLQ L + N+L L
Sbjct: 420 LQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVIL 479
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I +L L + NR+ L + L LQ+ ++ +NQ V ++
Sbjct: 480 PKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLN 539
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
E L NL ++ L NQ+T++ + L L L L NQLT
Sbjct: 540 LSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLT 592
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +L ++ L LQ L + NQL P+ I +L SL
Sbjct: 42 LTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESL 101
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ NR+ L + L LQ + N++ + E L NL +++LQ+NQ+ ++
Sbjct: 102 DLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPK-EIGQLQNLQTLNLQDNQLATLPVE 160
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L N+LT L +I L+ L+T++L N++
Sbjct: 161 IGQLQNLEKLNLRKNRLT-VLPKEIGQLQNLQTLNLQDNQL 200
>gi|311259185|ref|XP_003127976.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Sus
scrofa]
Length = 602
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN+++S+ +S S L+ +
Sbjct: 142 ILPEEITNLRNLKGLYLQHNELTCI-PEGFEQLFNLEDLDLSNNRLSSIPASFSSLSSVV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L +S NQL L +I G+KRL+ +D + N
Sbjct: 201 RLNISSNQLKS-LPAEISGMKRLKHLDCNSN 230
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 4/202 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L +P + L L +NNR++S+ L+ + N
Sbjct: 144 PEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLSSIPASFSSLSSVVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+ + E + L + +N + ++ L+ + L LYL N+L L +
Sbjct: 204 ISSNQLKSLPA-EISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLR--FLPE 260
Query: 219 IRGLKRLRTVDLSYNKINKFGT 240
K L+ + + N+I G
Sbjct: 261 FPSCKLLKELHVGENQIEMLGA 282
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L SL + G+ L L N+N L+++ +L ++ L+LL + +N+L
Sbjct: 198 SVVRLNISSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRF 257
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP + L L+ N+I L L+ L + V ++ N++ V DE L +L+
Sbjct: 258 LP-EFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLE 315
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I+S+ SL G L +L L N L
Sbjct: 316 RLDLSNNDISSLPCSL-GKLHLKFLALEGNPL 346
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 451 VSDVNLSF---NKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRF 507
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 508 KILPEVLYRIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNL 567
Query: 202 AYLYLSHN 209
L L N
Sbjct: 568 RTLLLDGN 575
>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 452
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L + L +L L L+ N+L +L ++G L LQ L +++NQL L
Sbjct: 257 LQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTL 316
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L +NN++T+L + L LQV + N+++ + + E L NL +
Sbjct: 317 PKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPK-EIGQLQNLQVL 375
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L +NQ+T++ + L L L L NQLT F +IR LK L+ + L N ++
Sbjct: 376 GLISNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQELHLYLNPLS 429
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 165 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L LQ ++ NQ+T + + E L NL +
Sbjct: 225 PKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPK-EIGQLQNLQRL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L NQLT L +I L+ LR +DL N++
Sbjct: 284 DLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKEIEQLQNLRVLDLDNNQL 336
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +T+L + L +L WL L+ N+L +L ++G L LQ L + QNQL LP +I
Sbjct: 219 NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 278
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L + N++T+L + L LQ +D NQ+T + + E + L NL + L NNQ+T
Sbjct: 279 NLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPK-EIEQLQNLRVLDLDNNQLT 337
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ + L L L L N+L+ L +I L+ L+ + L N++
Sbjct: 338 TLPKEVLRLQSLQVLALGSNRLS-TLPKEIGQLQNLQVLGLISNQL 382
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + + LT L + L +L L L+ N L +L ++G L LQ L + QN+L
Sbjct: 47 PLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L N+N++T+L +R L LQ ++ NQ+T + + E L NL
Sbjct: 107 ATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 166 KTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 221
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L + QL L
Sbjct: 119 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L +N++T+L + L L++ + N+IT + + E L NL +
Sbjct: 179 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPK-EIGQLQNLQWL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L NQLT L +I L+ L+ +DL N++
Sbjct: 238 DLHQNQLTTLPKEIGQLQNLQRLDLHQNQLT-TLPKEIGQLQNLQRLDLHQNQL 290
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ + L L +L L ++G L LQ L + N L LP ++ L
Sbjct: 38 TDLAKALQNPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 97
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L + NR+ +L + L LQ +++ N++T + + E + L NL + L NQ+T++
Sbjct: 98 RLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK-EIRQLRNLQELDLHRNQLTTLP 156
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L QLT L +I L+ L+T++L N++
Sbjct: 157 KEIGQLQNLKTLNLIVTQLT-TLPKEIGELQNLKTLNLLDNQL 198
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L L L L +NRL +L ++G L LQ+L + NQL L
Sbjct: 326 LRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 385
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L + N++T+ +R L LQ ++ N ++ + + L
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIRRL 439
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L +G N L++L + L +L L L +N+L +L ++G L LQ L +++NQL
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTT 407
Query: 121 LPSDIQLFSQLGSLYANNNRITS 143
P +I+ L L+ N ++S
Sbjct: 408 FPKEIRQLKNLQELHLYLNPLSS 430
>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
Length = 1126
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 26/194 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ LT L + LTDL WL+LN N+L +L ++G L L++L +E N+L LP +
Sbjct: 749 LNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNRLTKLPKE 808
Query: 125 IQLFSQLGSLY-ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I S L LY + N ++ L + LT L N+ NQ+ ++ + E NL NL ++L
Sbjct: 809 IGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPK-EIGNLTNLTQLNL 867
Query: 184 QN-----------------------NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
+ NQ+T + + LT L LYLS NQLT L +I
Sbjct: 868 SSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTA-LPKEIG 926
Query: 221 GLKRLRTVDLSYNK 234
L L +DLS N+
Sbjct: 927 NLTNLTELDLSENE 940
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L +L + LT L WL +N N+L+ L ++G L+ L L + NQL AL
Sbjct: 976 LKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTAL 1035
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I + L L+ N++ +L + LT L +D+NQ+T + E NL NL +
Sbjct: 1036 PKEIGNLTNLTKLHLYKNKLMALPPEMGRLTNLIELYLDYNQLTAL-PPEIGNLTNLTQL 1094
Query: 182 SLQNNQITSMNSSL 195
S NNQ+ S + +
Sbjct: 1095 SFYNNQLISPSPEI 1108
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
LT+L L+LN +L L ++G L+ L+ L ++ NQL ALP +I +QL L N N++
Sbjct: 950 LTNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQL 1009
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + LT L + NQ+T + + E NL NL + L N++ ++ + LT L
Sbjct: 1010 RQLPPEIGNLTNLTELYLYDNQLTALPK-EIGNLTNLTKLHLYKNKLMALPPEMGRLTNL 1068
Query: 202 AYLYLSHNQLT 212
LYL +NQLT
Sbjct: 1069 IELYLDYNQLT 1079
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Query: 62 IRKLHVGFN-NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R L++ N L L + LT+L L L++N+LK L ++G L+ L L + NQL+
Sbjct: 815 LRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKV 874
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I + L L N N++T L + LT L+V + NQ+T + + E NL NL
Sbjct: 875 LPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPK-EIGNLTNLTE 933
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N+ + + + LT L LYL+ QLT L+ +I L L+T+ L N++
Sbjct: 934 LDLSENE-NVLPAEIGNLTNLRRLYLNRKQLT-VLVPEIGNLTNLKTLSLKDNQL 986
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 21/171 (12%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + LT+L L L++N+LK L ++G L+ L LL + NQL LP
Sbjct: 841 QLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPP 900
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ---------ITMVRR----- 169
+I + L LY + N++T+L + LT L ++ N+ +T +RR
Sbjct: 901 EIGNLTNLEVLYLSRNQLTALPKEIGNLTNLTELDLSENENVLPAEIGNLTNLRRLYLNR 960
Query: 170 -------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
E NL NL ++SL++NQ+ ++ + LT+L +L ++ NQL +
Sbjct: 961 KQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQ 1011
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
LT+ L L +L L ++G L+ L L + +NQL LP +I L L NNR+
Sbjct: 743 LTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNRL 802
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T L + L+ L+ + N V + NL NL ++L +NQ+ + + LT L
Sbjct: 803 TKLPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNL 862
Query: 202 AYLYLSHNQL 211
L LS NQL
Sbjct: 863 TQLNLSSNQL 872
>gi|456875031|gb|EMF90265.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 526
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L NN +T FP I KL + N LT+L + L L L L+ N+
Sbjct: 127 LRLPNNQLT-----TFPKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQFT 181
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+L ++ L KL+ L + N+ LP +I+ L L ++NR T+L ++ L LQ
Sbjct: 182 TLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQW 241
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
N+D N+ T + + E + L NL ++L +N+ T++ + L KL L L+HNQLT L
Sbjct: 242 LNLDSNRFTTLPK-EIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTT-LP 299
Query: 217 DDIRGLKRLRTVDLSYNKI 235
+I L+ L+ + L N++
Sbjct: 300 KEIGKLQSLQRLTLWENQL 318
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+G N T+L ++ L +L WL L++NR +L ++ L LQ L ++ N+ L
Sbjct: 193 LKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTL 252
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L ++NR T+L + L KLQ ++ NQ+T + + E L +L +
Sbjct: 253 PKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPK-EIGKLQSLQRL 311
Query: 182 SLQNNQITSM-----------------------NSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+L NQ+T++ + L L L+L NQ T L +
Sbjct: 312 TLWENQLTTLPKEIGNLQNLQKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTT-LPKE 370
Query: 219 IRGLKRLRTVDLSYNKI 235
I L+ L+ +DL YNK+
Sbjct: 371 IGNLQNLQKLDLYYNKL 387
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N T+L + L L L L +NR +L ++ L LQ L ++ N+ L
Sbjct: 170 LKELHLDGNQFTTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTL 229
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L ++NR T+L ++ L LQ N+D N+ T + + E NL L +
Sbjct: 230 PKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPK-EIGNLQKLQKL 288
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
SL +NQ+T++ + L L L L NQLT
Sbjct: 289 SLAHNQLTTLPKEIGKLQSLQRLTLWENQLT 319
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + LT+L + L L WL LN N L +L ++G L KL L + NQL
Sbjct: 78 LQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTF 137
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L L +N++T+L + L KL+ ++D NQ T + + E + L L +
Sbjct: 138 PKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQFTTLPK-EIEKLQKLKEL 196
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L +N+ T++ + L L +L L N+ T L +I+ L+ L+ ++L N+
Sbjct: 197 HLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTT-LPKEIKKLQNLQWLNLDSNR 248
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT+L + L +L L L +L +L ++G L KL+ L + N L LP +I +L
Sbjct: 65 LTNLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKL 124
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L NN++T+ + L KLQ ++ NQ+T + +E L L + L NQ T++
Sbjct: 125 DDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTL-PEEIGKLQKLKELHLDGNQFTTL 183
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L KL L+L N+ T L +I+ L+ L+ ++L N+
Sbjct: 184 PKEIEKLQKLKELHLGSNRFTT-LPKEIKKLQNLQWLNLDSNR 225
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L L L L N+L +L ++G L LQ L + N L L
Sbjct: 285 LQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGNLQNLQKLNLNNNPLTTL 344
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ N+ T+L + L LQ ++ +N++T + + E NL NL +
Sbjct: 345 PKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLTTLPK-EIGNLQNLQKL 403
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L NNQ+T++ + L L L LS+N LT
Sbjct: 404 DLYNNQLTTLPKEIGNLQSLESLDLSYNDLT 434
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L LFL N+ +L ++G L LQ L + N+L LP +I L L NN++
Sbjct: 351 LQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNNQL 410
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T+L + L L+ ++ +N +T + + E L L + L NQ+ ++ + L KL
Sbjct: 411 TTLPKEIGNLQSLESLDLSYNDLTTLPK-EIGKLQKLKKLELYYNQLKTLPKEIEKLQKL 469
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L L NQLT L ++I L++L+ +DL N
Sbjct: 470 ETLGLYGNQLTT-LPEEIGKLQKLQELDLGDN 500
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 23/137 (16%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN----- 116
++KL + +N LT+L + L +L L L NN+L +L ++G L L+ L + N
Sbjct: 377 LQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYNDLTTL 436
Query: 117 ------------------QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
QL+ LP +I+ +L +L N++T+L + L KLQ +
Sbjct: 437 PKEIGKLQKLKKLELYYNQLKTLPKEIEKLQKLETLGLYGNQLTTLPEEIGKLQKLQELD 496
Query: 159 MDFNQITMVRRDEFQNL 175
+ N + ++++ Q L
Sbjct: 497 LGDNPSLIDQKEKIQKL 513
>gi|418666516|ref|ZP_13227938.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|421125277|ref|ZP_15585530.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421137350|ref|ZP_15597437.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410018564|gb|EKO85402.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410437184|gb|EKP86287.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410757754|gb|EKR19362.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 349
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 6/206 (2%)
Query: 26 SHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTD 84
S P+ +LK L L L N I+ + ++ + P ++ L++ N + + L +
Sbjct: 102 SLPVEIGNLKN---LEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQN 158
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L WL + N+LK L +LG L L +L + N+L+ LPS F L SL N NR
Sbjct: 159 LEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVF 218
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
L L KL+ + NQ T + +E NL NL+S+ L+ N++ + ++ L L L
Sbjct: 219 PKELISLKKLETLELTGNQFTFL-PEEIGNLSNLNSLFLEANRLKQLPQNIGKLQNLESL 277
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDL 230
YL NQLT L ++I L+ L+ + L
Sbjct: 278 YLQENQLTT-LPEEIGSLQNLKELYL 302
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP TI KL +G N ++SL + L +L L L++N+L SL ++G L L++L
Sbjct: 57 FPKTITKLRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEIL 116
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ +N++ LP D L L LY + N+ + L L+ + NQ+ + ++
Sbjct: 117 TLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKEL-PEK 175
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL+ + L N++ + SS S L L L++N+ F ++ LK+L T++L+
Sbjct: 176 LGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVF-PKELISLKKLETLELT 234
Query: 232 YNKI 235
N+
Sbjct: 235 GNQF 238
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + +L S + L +L L N LK + L L+ L + +NQ+
Sbjct: 18 PNLVRTLVLDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQI 77
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR--------- 169
+LP +I L L ++N++TSL + L L++ + N+I+++ +
Sbjct: 78 SSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLK 137
Query: 170 -------------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
DE L NL+ + NQ+ + L L L LYL N+L + L
Sbjct: 138 ILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNEL-KVLP 196
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+ L++++L+YN+ F
Sbjct: 197 SSFSEFRSLKSLNLNYNRFQVF 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L L++ LKS ++ L L+ L+ L+ P I L L N+I+SL
Sbjct: 24 LVLDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEE 83
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ L L+ ++ NQ+T + E NL NL+ ++L N+I+ + S L LYLS
Sbjct: 84 IGELQNLKELDLSDNQLTSLPV-EIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLS 142
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
N+ +F D+I L+ L +D S N++ + +
Sbjct: 143 QNKFRKF-PDEILQLQNLEWLDFSENQLKELPEK 175
>gi|410907898|ref|XP_003967428.1| PREDICTED: leucine-rich repeat-containing protein 10-like [Takifugu
rubripes]
Length = 276
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P R L + L L + +L L+L+NN L L +L L KLQLL ++ N E
Sbjct: 29 PLDRTLDLSGRQLRRLPVAACVFDELVKLYLSNNNLSRLPAELQGLRKLQLLALDFNCFE 88
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP + QL LY +NR+ L G LR L +L ++ N + + L NL
Sbjct: 89 ELPVAVCRLPQLSILYLGSNRLWRLPGELRDLKELSTLWLETNCFLSFPKVVCE-LSNLK 147
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF---LLDDIRGLKRLRTVDLSYNKIN 236
++ L NQI S+ LS L +L ++L+ NQL EF LLD + L +D+ N+I
Sbjct: 148 TLHLGYNQIQSLPRELSQLEELRSIWLAGNQLAEFPPVLLD----MHLLAVIDVDRNRIR 203
Query: 237 KF 238
F
Sbjct: 204 HF 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 28/187 (14%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS 133
+ N++RG+ F+ + R + L G L + + L + QL LP +F +L
Sbjct: 1 MGNAVRGIVA----FVPSERCQRFLVGDLEDMPLDRTLDLSGRQLRRLPVAACVFDELVK 56
Query: 134 LYANNNRITSLDGLLRGLTKLQVFNMDFN-----QITMVR-----------------RDE 171
LY +NN ++ L L+GL KLQ+ +DFN + + R E
Sbjct: 57 LYLSNNNLSRLPAELQGLRKLQLLALDFNCFEELPVAVCRLPQLSILYLGSNRLWRLPGE 116
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
++L L ++ L+ N S + L+ L L+L +NQ+ + L ++ L+ LR++ L+
Sbjct: 117 LRDLKELSTLWLETNCFLSFPKVVCELSNLKTLHLGYNQI-QSLPRELSQLEELRSIWLA 175
Query: 232 YNKINKF 238
N++ +F
Sbjct: 176 GNQLAEF 182
>gi|403284548|ref|XP_003933628.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2 [Saimiri boliviensis boliviensis]
Length = 1032
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 7/202 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL L++N I I+ A F P + L + N ++ + S L +L L+NNR+ +
Sbjct: 186 ITLLSLIHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITT 245
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 246 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 305
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 306 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 365
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
D +RL +DLSYN++
Sbjct: 366 ISPDAWEFCQRLSELDLSYNQL 387
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 304 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 363
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 364 ERISPDAWEFCQRLSELDLSYNQLTHLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 423
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL L +DL+
Sbjct: 424 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLDSLEHLDLNN 483
Query: 233 NKI 235
N I
Sbjct: 484 NAI 486
>gi|372273437|ref|NP_001243220.1| scribbled homolog [Xenopus (Silurana) tropicalis]
gi|355895400|gb|AET07148.1| scribbled short isoform [Xenopus (Silurana) tropicalis]
Length = 976
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 3/200 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+TL L N + + + +F + +L +G N+L L ++L L +L L+L+ N+L SL
Sbjct: 153 LVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTLGALPNLRELWLDRNQLSSL 212
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+LG L +L L + +N+LE LP++I L L + N+++SL L L +L +
Sbjct: 213 PSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQNQLSSLPSSLGQLKQLSILK 272
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D N++T + + + NL I L N +T + S+ LTKL L + N+L L +
Sbjct: 273 VDQNRLTQL-TESIGDCENLSEIILTENLLTVLPKSMGNLTKLTNLNVDRNRLLS-LPSE 330
Query: 219 IRGLKRLRTVDLSYNKINKF 238
I G L + L N+++
Sbjct: 331 IGGCASLNVLSLRDNQLSAL 350
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + GL L L L+ N+L SL LG L +L +L ++QN+L L
Sbjct: 225 LDVSENKLEQLPAEISGLMSLTDLLLSQNQLSSLPSSLGQLKQLSILKVDQNRLTQLTES 284
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L + N +T L + LTKL N+D N++ + E +L+ +SL+
Sbjct: 285 IGDCENLSEIILTENLLTVLPKSMGNLTKLTNLNVDRNRLLSLP-SEIGGCASLNVLSLR 343
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
+NQ++++ L+G T+L L ++ N+L
Sbjct: 344 DNQLSALPPELAGATELHVLDVAGNRL 370
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 8/189 (4%)
Query: 58 FPPTIR------KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP + +L + N++ + S++ L + N L L L L L
Sbjct: 74 LPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHL 133
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ L++LPSDI S L +L N + S+ L L KL+ ++ N + V D
Sbjct: 134 ALNDVSLQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDL-QVLPDT 192
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL + L NQ++S+ S L L +L L +S N+L E L +I GL L + LS
Sbjct: 193 LGALPNLRELWLDRNQLSSLPSELGNLRRLVCLDVSENKL-EQLPAEISGLMSLTDLLLS 251
Query: 232 YNKINKFGT 240
N+++ +
Sbjct: 252 QNQLSSLPS 260
>gi|418720656|ref|ZP_13279852.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410742930|gb|EKQ91675.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 251
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 104/177 (58%), Gaps = 8/177 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT L N + L +L L L N+L+++ ++G L LQ L ++ NQL L
Sbjct: 18 LQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDLQELHLDGNQLTIL 77
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P++I L SL NN++T+L G L+ L L+++N NQ+T + +E L NL
Sbjct: 78 PNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYN---NQLTTL-PEEIGRLKNL 133
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQIT + + + L++L L LS N+LT L +I L++LR++DLS N++
Sbjct: 134 QKLYLNENQITILPNEVGNLSELEELNLSGNRLTN-LPKEIGQLQKLRSLDLSNNQL 189
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N L ++ N + L DL L L+ N+L L ++G L L+ L + NQL AL
Sbjct: 41 LEELDLGANQLRTIPNEIGQLKDLQELHLDGNQLTILPNEIGQLKNLRSLELYNNQLTAL 100
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L SL NN++T+L + L LQ ++ NQIT++ +E NL L+ +
Sbjct: 101 PNEIGQLKDLRSLELYNNQLTTLPEEIGRLKNLQKLYLNENQITIL-PNEVGNLSELEEL 159
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+L N++T++ + L KL L LS+NQLT L +I LK LR + L N
Sbjct: 160 NLSGNRLTNLPKEIGQLQKLRSLDLSNNQLT-TLPKEIGHLKNLRRLVLKGN 210
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N LT L N + L +L L L NN+L +L ++G L L+ L + NQL L
Sbjct: 64 LQELHLDGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTL 123
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY N N+IT L + L++L+ N+ N++T + + E L L S+
Sbjct: 124 PEEIGRLKNLQKLYLNENQITILPNEVGNLSELEELNLSGNRLTNLPK-EIGQLQKLRSL 182
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+T++ + L L L L N + + IR L
Sbjct: 183 DLSNNQLTTLPKEIGHLKNLRRLVLKGNNFSPQEKERIRNL 223
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT L L +L L L +N+L L ++G L L+ L + NQL +P++I L
Sbjct: 5 LTVLPKELERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDL 64
Query: 132 GSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
L+ + N++T L G L+ L L+++N NQ+T + +E L +L S+ L NNQ+
Sbjct: 65 QELHLDGNQLTILPNEIGQLKNLRSLELYN---NQLTAL-PNEIGQLKDLRSLELYNNQL 120
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
T++ + L L LYL+ NQ+T L +++ L L ++LS N++
Sbjct: 121 TTLPEEIGRLKNLQKLYLNENQIT-ILPNEVGNLSELEELNLSGNRL 166
>gi|402854920|ref|XP_003892099.1| PREDICTED: leucine-rich repeat-containing protein 40 [Papio anubis]
Length = 602
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN++T++ +S S L+ L
Sbjct: 142 ILPEEITNLRNLKCLYLQHNELTCI-SEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNQLKS-LPAEINRMKRLKHLDCNSN 230
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 31 SDDLKGTPALITLLLVNN------------------NITHIHENAFPPTI------RKLH 66
+DDL+ PAL L + +N N++H P I + L+
Sbjct: 98 TDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLY 157
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N LT ++ L++L L L+NNRL ++ +LS L L + NQL++LP++I
Sbjct: 158 LQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEIN 217
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+L L N+N + ++ L G+ L++ + N++ + EF + L + + N
Sbjct: 218 RMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL--PEFPSCSLLKELHVGEN 275
Query: 187 QITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QI + + L L + L L N+L + D+I L+ L +DLS N I+
Sbjct: 276 QIEMLEAEHLKHLNSILVLDLRDNKLKS-VPDEITLLQSLERLDLSNNDISSL 327
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NNR+T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ NQ+ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 204 LSSNQLKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 255
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 451 VSDVNLSF---NKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRF 507
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 508 KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNL 567
Query: 202 AYLYLSHN 209
L L N
Sbjct: 568 RTLLLDGN 575
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +++ FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 451 VSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKML 510
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 511 PEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 566
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 567 LRTLLLDGN 575
>gi|320170618|gb|EFW47517.1| proto-oncogene tyrosine-protein kinase LCK [Capsaspora owczarzaki
ATCC 30864]
Length = 762
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 7/198 (3%)
Query: 45 LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSLEGQ 101
L++N IT I AF + L++ N +TS+ S+ GLT L L L+ N++ S+
Sbjct: 6 LLHNQITGIPAGAFTGMTALTNLYMHRNQITSIPESVFAGLTALAELSLDYNQITSVPDD 65
Query: 102 LGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFN 158
T L+ L L ++ NQ+ ++P D + L L NN+ITS+ G GLT L +
Sbjct: 66 AFTGLTALVSLTLDYNQITSVPDDAFTGLTALTHLSLGNNQITSVPAGAFTGLTALTALS 125
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQI + D F +L L ++ L +N I + +SS +GLT L YL+L NQ+T
Sbjct: 126 LGNNQIISISADAFTDLTALTALLLDSNAIIGIPSSSFTGLTALTYLHLDGNQITSIPDS 185
Query: 218 DIRGLKRLRTVDLSYNKI 235
GL L T+ L+ N I
Sbjct: 186 SFTGLTALITLALNDNPI 203
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITS 143
+N L+N G ++ L L + +NQ+ ++P + + L L + N+ITS
Sbjct: 2 VNRSLLHNQITGIPAGAFTGMTALTNLYMHRNQITSIPESVFAGLTALAELSLDYNQITS 61
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ D GLT L +D+NQIT V D F L L +SL NNQITS+ + + +GLT L
Sbjct: 62 VPDDAFTGLTALVSLTLDYNQITSVPDDAFTGLTALTHLSLGNNQITSVPAGAFTGLTAL 121
Query: 202 AYLYLSHNQLTEFLLD 217
L L +NQ+ D
Sbjct: 122 TALSLGNNQIISISAD 137
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 6/166 (3%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNN 92
G AL L L N IT + ++AF + L + +N +TS+ +++ GLT L L L N
Sbjct: 45 GLTALAELSLDYNQITSVPDDAFTGLTALVSLTLDYNQITSVPDDAFTGLTALTHLSLGN 104
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGLLR 149
N++ S+ G L+ L L + NQ+ ++ +D + L +L ++N I +
Sbjct: 105 NQITSVPAGAFTGLTALTALSLGNNQIISISADAFTDLTALTALLLDSNAIIGIPSSSFT 164
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
GLT L ++D NQIT + F L L +++L +N IT++ L
Sbjct: 165 GLTALTYLHLDGNQITSIPDSSFTGLTALITLALNDNPITTLPPGL 210
>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
Length = 762
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Query: 34 LKGTPALI--TLLLVNNNITHIHENAFPP------TIRKLHVGFNNLTSLNNSLRGLTDL 85
LK P I L LVN + ++ + + FPP +R+L + N LT + + + L +L
Sbjct: 116 LKKLPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNL 175
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
L + NN+L + + L KL++L I NQL +P + S L SL AN N+ ++
Sbjct: 176 ELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFP 235
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
+ L KL + NQ+T V +L NL+ + + NN++ + + L KL LY
Sbjct: 236 LGVEKLQKLTRLLIHDNQLTEVPSG-VCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELY 294
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ NQLTE + +R L L + + NK++ F
Sbjct: 295 IYGNQLTE-VPSGVRSLPNLEVLSVVNNKLSTF 326
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 41 ITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
+ LL+V NN+ + FPP + R+L + N LT + + L +L L + NN+
Sbjct: 359 LELLVVGNNML----STFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYNNK 414
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
L + + L KL+ L I NQL +PS + L L NN++++ + LTKL
Sbjct: 415 LSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKL 474
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ ++ NQ+T V +L NL+ +S+ N I + ++ L +L L + + Q EF
Sbjct: 475 RELYINGNQLTEVPSG-VCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQFDEF 533
Query: 215 LLDDIRGLKRLRTVDLSYNKINKF 238
R + +L+T+++ Y KF
Sbjct: 534 ----PRQVLQLKTLEVLYAGGCKF 553
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FPP + R+L++ N LT + + +R L +L L + NN+L + + L KL L
Sbjct: 280 FPPGVEKLQKLRELYIYGNQLTEVPSGVRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKL 339
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
I NQL +PS + L L NN +++ + L KL+ + NQ+T V
Sbjct: 340 GINDNQLTEVPSGVCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPG- 398
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+L NL+ + + NN++++ + L KL L + NQLTE + + L L + +
Sbjct: 399 VCSLPNLEVLHVYNNKLSTFPPGVEKLQKLRELRIHDNQLTE-VPSRVCSLPNLEVLTVG 457
Query: 232 YNKINKF 238
NK++ F
Sbjct: 458 NNKVSTF 464
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 25/200 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT----------------- 104
+++L+V NNL+ L + L L +L WL++ +N+LK L ++ +
Sbjct: 83 LKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNNLSTF 142
Query: 105 ------LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
L K++ L I NQL +PS + L L NN++++ + L KL++
Sbjct: 143 PPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKLRILY 202
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T V R +L NL+S+ N+ ++ + L KL L + NQLTE +
Sbjct: 203 IYGNQLTEVPRG-VCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDNQLTE-VPSG 260
Query: 219 IRGLKRLRTVDLSYNKINKF 238
+ L L +D+ NK+ F
Sbjct: 261 VCSLPNLEVLDVGNNKLFTF 280
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 56 NAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ FP + KL + N LT + + + L +L L + NN+L + + L KL+
Sbjct: 232 STFPLGVEKLQKLTRLLIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLR 291
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L I NQL +PS ++ L L NN++++ + L KL ++ NQ+T V
Sbjct: 292 ELYIYGNQLTEVPSGVRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPS 351
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+L NL+ + + NN +++ + L KL L + NQLTE + + L L +
Sbjct: 352 G-VCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTE-VPPGVCSLPNLEVLH 409
Query: 230 LSYNKINKF 238
+ NK++ F
Sbjct: 410 VYNNKLSTF 418
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 26/218 (11%)
Query: 45 LVNNNITHIHENAFPPT-IRKLHVGFNN-----------------------LTSLNNSLR 80
L N +T I E F T + L V N LTSL ++
Sbjct: 19 LSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLPQAIS 78
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L L L++++N L L L L L+ L ++ N+L+ LP+ I L + A+NN
Sbjct: 79 SLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNN 138
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+++ + L K++ + NQ+T V +L NL+ +S+ NN++++ + L K
Sbjct: 139 LSTFPPGVEKLQKVRELRIYGNQLTEVPSG-VCSLPNLELLSVGNNKLSTFPPGVEKLQK 197
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LY+ NQLTE + + L L +++ + NK + F
Sbjct: 198 LRILYIYGNQLTE-VPRGVCSLSNLESLEANGNKFSTF 234
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Query: 64 KLHVGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+L++ +N LTS+ + +TDL L ++NN+L S+ +G L KL L N L +L
Sbjct: 14 RLYLDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSL 73
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L LY ++N ++ L L L L+ + N++ + F L NL +
Sbjct: 74 PQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCL-NLVNF 132
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NN +++ + L K+ L + NQLTE + + L L + + NK++ F
Sbjct: 133 DASNNNLSTFPPGVEKLQKVRELRIYGNQLTE-VPSGVCSLPNLELLSVGNNKLSTF 188
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 38 PALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NN ++ FPP + R+L++ N LT + + + L +L L +
Sbjct: 449 PNLEVLTVGNNKVS-----TFPPGVEKLTKLRELYINGNQLTEVPSGVCSLPNLEKLSVG 503
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N ++ L + L++L+ L + Q + P + L LYA + + + L
Sbjct: 504 GNPIRRLPDDVTRLARLKALSVPNCQFDEFPRQVLQLKTLEVLYAGGCKFDMVPDEVGNL 563
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L ++++N + + +LHNL + L N+ + L L + L +S+N +
Sbjct: 564 QHLCYLSLEYNLLRTL-PSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLDISNNNI 622
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
T L + +LR +D+S N +
Sbjct: 623 TR-LPTALHRADKLRDLDVSGNPL 645
>gi|429961274|gb|ELA40819.1| hypothetical protein VICG_02144, partial [Vittaforma corneae ATCC
50505]
Length = 248
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 2/179 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL + FNNL +L + L +L L L NRL +L ++ L LQ L + NQ E+
Sbjct: 69 LEKLDLSFNNLETLPPEIGKLKNLQHLDLYGNRLWTLPSEVEELKNLQYLDLGNNQFESF 128
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I+ L L N+N+ L + L KLQ + N++ ++ DE + L +
Sbjct: 129 PTVIRKLKNLERLILNDNKFGLLPIEIAELKKLQCLELRGNKLKLL-PDEIGGMKELREL 187
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L +N++ S + ++ L KL L L N+L + L D+I LK L+T+ L YN+ F T
Sbjct: 188 ILNDNELESFPTVIAELRKLQTLNLRGNKL-KLLPDEIETLKELQTLYLEYNEFESFPT 245
>gi|281339484|gb|EFB15068.1| hypothetical protein PANDA_006723 [Ailuropoda melanoleuca]
Length = 1065
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 8/211 (3%)
Query: 36 GTPAL-ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
G P ITLL LV+N I I+ AF P + L + N ++ + S L +L L+
Sbjct: 116 GEPTCNITLLSLVHNIIPEINAEAFQFYPALENLDLSSNIISEIKTSSFPRMQLKYLNLS 175
Query: 92 NNRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-L 148
NNR+ LE G LS L+V + +N++ +P I L L NRI ++GL
Sbjct: 176 NNRITILEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKVVEGLTF 235
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLS 207
+GL L+ M N I+ ++ F L N++ + L+ N +T +N L GL L LY+S
Sbjct: 236 QGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEYNNLTEVNKGWLYGLRMLQQLYVS 295
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N + D +RL +DLSYN++ +
Sbjct: 296 QNAVERISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
+G +L +L + N I+ + + AF G +N+ L LT++N
Sbjct: 235 FQGLDSLRSLKMQRNGISKLKDGAF--------FGLDNMEELELEYNNLTEVN------- 279
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGL 151
+G L L LQ L + QN +E + D F Q L L + N++T LD GL
Sbjct: 280 -----KGWLYGLRMLQQLYVSQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFLGL 334
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLS 207
+ L+ N+ N++T + F+ L NL +++L+NN+I+ + + +GLT L L L
Sbjct: 335 SLLERLNLGDNRVTHIADGVFRFLSNLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQ 394
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ+ GL+ L +DL+ N I
Sbjct: 395 GNQIKSITKKAFIGLESLEHLDLNNNAI 422
>gi|328779859|ref|XP_003249714.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis
mellifera]
Length = 565
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ +L + +N+T L +++R LT L +L N+L +L ++G L L+ L + +N L +
Sbjct: 85 CLERLDLSKSNITHLPSTVRDLTHLIEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTS 144
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ ++ L L +N+++ + ++ LT L + FN++ V D +NL NL
Sbjct: 145 LPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYV-SDNIRNLTNLTM 203
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL+ N+I + + + L L +SHN L E L ++I +L T+DL +N++
Sbjct: 204 LSLRENKIRELPAGIGKLINLITFDVSHNHL-EHLPEEIGNCVQLSTLDLQHNEL 257
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N LT + + ++ L +L L L+NN LK + + L KL++L +E+N++E+LP+
Sbjct: 390 ELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPN 449
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +N++TSL + LT L ++ N + + +E L NLDS+ +
Sbjct: 450 EIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL-PEEIGTLENLDSLYV 508
Query: 184 QNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+N + ++ L+ T L+ + + + L++ + + G
Sbjct: 509 NDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAG 547
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N LT++ SL ++ + N++ L +G L +LS L + + +N
Sbjct: 269 SLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFT 328
Query: 120 ALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
A PS F+ + S+ +N+I + G+ L NM NQ+T + D N
Sbjct: 329 AYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLD-IGTWIN 387
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+T + + L L L LS+N L + + I L++LR +DL NKI
Sbjct: 388 MVELNLGTNQLTKIPDDIQCLQNLEVLILSNN-LLKRIPASIANLRKLRVLDLEENKI 444
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L + ++ PA I L L+ +++H H P I L + N L + +++
Sbjct: 206 LRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIG 265
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN 139
L L L L NRL ++ L + +E NQ+ LP + S L ++ + N
Sbjct: 266 NLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRN 325
Query: 140 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
T+ G T + N++ N+I + F NL ++++ NQ+T++ +
Sbjct: 326 AFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLDIGTW 385
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L NQLT+ + DDI+ L+ L + LS N + +
Sbjct: 386 INMVELNLGTNQLTK-IPDDIQCLQNLEVLILSNNLLKRI 424
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 15 LNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV---GFNN 71
+N+++L T DD++ L L+L NN + I A +RKL V N
Sbjct: 386 INMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIP--ASIANLRKLRVLDLEENK 443
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
+ SL N + L DL L L +N++ SL +G L+ L L + +N L LP +I L
Sbjct: 444 IESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENL 503
Query: 132 GSLYANNN 139
SLY N+N
Sbjct: 504 DSLYVNDN 511
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 44/260 (16%)
Query: 17 LIDLEPETG----------------SHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP 60
L+ L PE G S P T ++LK +L L L +N ++ I + +
Sbjct: 119 LVTLPPEIGCLGNLETLALSENSLTSLPNTLENLK---SLRVLDLRHNKLSEIPDVVYKL 175
Query: 61 T-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
T + L + FN + +++++R LT+L L L N+++ L +G L L + N LE
Sbjct: 176 TNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLE 235
Query: 120 ALPSDIQLFSQLGSLYANNN-----------------------RITSLDGLLRGLTKLQV 156
LP +I QL +L +N R+T++ L +
Sbjct: 236 HLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDE 295
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFL 215
F+++ NQ++ + +L +L +I+L N T+ S + T + + L HN++ +
Sbjct: 296 FSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIP 355
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
K L +++ N++
Sbjct: 356 YGIFSRAKNLAKLNMKENQL 375
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 25/164 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ N LT+L + ++ L L N+L + + L L++L++ N L+ +
Sbjct: 365 LAKLNMKENQLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRI 424
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I AN L KL+V +++ N+I + +E L +L +
Sbjct: 425 PASI----------AN-------------LRKLRVLDLEENKIESL-PNEIGFLRDLQKL 460
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
LQ+NQ+TS+ ++ LT L YL + N L +L ++I L+ L
Sbjct: 461 ILQSNQVTSLPRAIGHLTNLTYLSVGENNLN-YLPEEIGTLENL 503
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L + ++ + LPS ++ + L Y N++ +L + L L+ + N +T +
Sbjct: 86 LERLDLSKSNITHLPSTVRDLTHLIEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSL 145
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ +NL +L + L++N+++ + + LT L L+L N++ ++ D+IR L L
Sbjct: 146 P-NTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRV-RYVSDNIRNLTNLTM 203
Query: 228 VDLSYNKINKF 238
+ L NKI +
Sbjct: 204 LSLRENKIREL 214
>gi|291398245|ref|XP_002715807.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 2
[Oryctolagus cuniculus]
Length = 1062
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ AF P + L + N ++ + S L +L L+NNR+ +
Sbjct: 119 ITLLSLVHNLIPEINAEAFQFYPALESLDLSSNVISEIKTSSFPRMQLKYLNLSNNRIST 178
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 179 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 238
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T ++ L GL L LY+S N +
Sbjct: 239 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTWVHKGWLYGLRMLQQLYVSQNAIER 298
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 299 ISPDAWEFCQRLSELDLSYNQLTRL 323
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 237 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTWVHKGWLYGLRMLQQLYVSQNAI 296
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 297 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 356
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 357 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 416
Query: 233 NKI 235
N +
Sbjct: 417 NAV 419
>gi|449105338|ref|ZP_21742043.1| hypothetical protein HMPREF9729_00308 [Treponema denticola ASLM]
gi|451969644|ref|ZP_21922873.1| hypothetical protein HMPREF9728_02075 [Treponema denticola US-Trep]
gi|448967325|gb|EMB47966.1| hypothetical protein HMPREF9729_00308 [Treponema denticola ASLM]
gi|451701741|gb|EMD56202.1| hypothetical protein HMPREF9728_02075 [Treponema denticola US-Trep]
Length = 537
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 113/208 (54%), Gaps = 17/208 (8%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LT+ D++G AL +L N +T ++ + + KL N+LT+LN ++ T L L
Sbjct: 275 LTALDVQGLTALQSLSCGGNQLTELNVSGCT-ALEKLSCSDNHLTALN--VQDCTALKEL 331
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+ N+L +L+ Q L+ LQ L NQL AL D+Q + L L NN++T+L+ +
Sbjct: 332 WCYRNQLTALDVQ--GLNALQELHCYINQLTAL--DVQGCTALKELDCWNNQLTALN--V 385
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
+GL+ L+ NQ+T + + Q L L S+ NQ+T +N +SG T L +LY +
Sbjct: 386 QGLSALEKLYCSGNQLTAL---DVQGLTALQSLYCHGNQLTELN--VSGCTALQWLYCRN 440
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NQLT D++GL L+ + N++N
Sbjct: 441 NQLTAL---DVQGLTSLQMLYCPGNQLN 465
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L+ +NN+L +L+ Q L+ LQLL QNQL AL ++Q + L L N++T+LD
Sbjct: 205 LYCDNNQLTALDVQ--DLTALQLLWCFQNQLTAL--NVQGLNNLQRLECVYNQLTTLD-- 258
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
++G T LQ NQ+T + + Q L L S+S NQ+T +N +SG T L L S
Sbjct: 259 VQGCTALQRLVCWNNQLTAL---DVQGLTALQSLSCGGNQLTELN--VSGCTALEKLSCS 313
Query: 208 HNQLTEFLLDDIRGLKRL 225
N LT + D LK L
Sbjct: 314 DNHLTALNVQDCTALKEL 331
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L ++ LY +NN++T+LD ++ LT LQ+ NQ+T + Q L+NL + N
Sbjct: 198 LKGKITELYCDNNQLTALD--VQDLTALQLLWCFQNQLTALN---VQGLNNLQRLECVYN 252
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
Q+T+++ + G T L L +NQLT D++GL L+++ N++ +
Sbjct: 253 QLTTLD--VQGCTALQRLVCWNNQLTAL---DVQGLTALQSLSCGGNQLTEL 299
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
LT+ +++G AL L N +T + ++ L+ N LT LN S G T L WL
Sbjct: 380 LTALNVQGLSALEKLYCSGNQLTALDVQGLT-ALQSLYCHGNQLTELNVS--GCTALQWL 436
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
+ NN+L +L+ Q L+ LQ+L NQL A + I++F+ L A +N L +
Sbjct: 437 YCRNNQLTALDVQ--GLTSLQMLYCPGNQLNA-QAFIKIFTDLPQRDAGDNAKCCL--YI 491
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
G + DF + V+ FQN + ++N ++ +N+SL
Sbjct: 492 EGPGVTEGNCTDFTTPSEVQA-AFQNAKD-----VKNWRMCKVNTSL 532
>gi|429962555|gb|ELA42099.1| hypothetical protein VICG_00740, partial [Vittaforma corneae ATCC
50505]
Length = 236
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 51 THIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+H +P K+ + F ++TS++++++ L +L L L NN+LK L ++G L LQ
Sbjct: 63 SHYSFERYPENETKISMPFKDITSIDSNIKRLVNLEKLCLRNNKLKLLPAEIGELKNLQE 122
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + N+L++LP++I L L+ N N++ SL + L LQ +D+N++ ++
Sbjct: 123 LHLSGNKLKSLPAEIGRLETLQKLHLNLNKLKSLPAEIGKLKNLQYLYLDYNKLKLLPV- 181
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
E + NL + L N+I + + + L L L LS+N+L + L +I LK L+
Sbjct: 182 EIGEMRNLQKLHLSGNKIEILPAEIGNLKNLNILDLSNNKL-KLLPAEIGELKNLQ 236
>gi|218248723|ref|YP_002374094.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
gi|218169201|gb|ACK67938.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
Length = 937
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 57 AFPPTIRKL--HVGF-----NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ PP I +L H+ F N L +L + L LN LFL N L+ L ++G LS L
Sbjct: 32 SLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGTLQSLNALFLTTNYLEELPPEIGNLSTLH 91
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + +N+L LP + L LY NN++ SL L L+ ++ NQ+T++
Sbjct: 92 RLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLL-P 150
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+EF NL L + L++N++ S+N + L +L+ L +S+NQLT L I ++ L ++
Sbjct: 151 EEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLTN-LPPQISEVESLIELN 209
Query: 230 LSYNKI 235
SYN++
Sbjct: 210 ASYNQL 215
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 2/179 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N LT L L L+WL L +N+L+SL ++ L +L L I NQL L
Sbjct: 136 LERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLTNL 195
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L L A+ N++T L G L L+ L + N+ N+I + R E L NL+++
Sbjct: 196 PPQISEVESLIELNASYNQLTILPGELGELSNLDLLNLSHNKIEKLPR-EIGQLKNLNTL 254
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+L N + + S + L++L L LSHN L + +I L++L T+ L YNK+ T
Sbjct: 255 NLIYNNLYYLPSQIGELSQLIDLRLSHNYLDN-IPSEIEKLRKLTTLYLGYNKLKILPT 312
>gi|440903438|gb|ELR54095.1| Leucine-rich repeats and immunoglobulin-like domains protein 3,
partial [Bos grunniens mutus]
Length = 1070
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 10/207 (4%)
Query: 39 ALITLL-LVNNNITHI---HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
A ITLL L N I I H F ++ L + NN++ L +L L L +L++N+NR
Sbjct: 72 ANITLLSLAGNKIVEILPEHLRQFQ-SLETLDLSGNNISELKTALPPL-QLKYLYINSNR 129
Query: 95 LKSLE-GQLGTL-SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGL 151
+ S+E G L S L +L + +N++ ALP + QL L N N+I ++DGL +GL
Sbjct: 130 VTSMEPGYFDNLASTLLVLKLNRNRISALPPKMFKLPQLQHLELNRNKIKNIDGLTFQGL 189
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQ 210
L+ M N +T + F L N++ + L +N +T + L GL L L+LS N
Sbjct: 190 GALKFLKMQRNGVTRLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNA 249
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINK 237
++ D ++L +DL+YN +++
Sbjct: 250 ISRISPDAWEFCQKLSELDLTYNHLSR 276
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LG 132
++ + GL+++ L L++N L + +G L L LQ L + QN + + D F Q L
Sbjct: 206 MDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAISRISPDAWEFCQKLS 265
Query: 133 SLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-- 189
L N ++ LD GL+ L ++ N++ + F+ L +L ++ L+NN+I+
Sbjct: 266 ELDLTYNHLSRLDDSSFLGLSLLNTLHIGNNRVNYIADCAFRGLSSLKTLDLKNNEISWT 325
Query: 190 --SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
MN + SGL KL L L N++ GL L +DLS N I
Sbjct: 326 IEDMNGAFSGLDKLKRLILQGNRIRSITKKAFTGLDALEHLDLSDNAI 373
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 46/83 (55%)
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ N+++ ++ +LH+L + L NN++ ++ + + L L+ N++ E L +
Sbjct: 31 DLSHNRLSFIKASSLSHLHSLREVKLNNNELETIPNLGPVTANITLLSLAGNKIVEILPE 90
Query: 218 DIRGLKRLRTVDLSYNKINKFGT 240
+R + L T+DLS N I++ T
Sbjct: 91 HLRQFQSLETLDLSGNNISELKT 113
>gi|83649156|ref|YP_437591.1| hypothetical protein HCH_06527 [Hahella chejuensis KCTC 2396]
gi|83637199|gb|ABC33166.1| Leucine-rich repeat (LRR) protein [Hahella chejuensis KCTC 2396]
Length = 306
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 48 NNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N I+ I H ++KL V N + + + LT L L ++ N+L+++ ++G L+
Sbjct: 33 NRISAIPHSIGSAAELKKLSVFDNQIAEIVPEIWSLTQLEDLNVSKNQLEAVSSEIGNLT 92
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
KL+++ I N+L +P I + LYA+NN+I +L G L+ L KL N+ N +T
Sbjct: 93 KLKIIDIAHNRLSEMPGSIAHCRDVEFLYASNNKIAALPGSLKQLDKLLYLNLSDNPLTA 152
Query: 167 VRRD-EFQNL--------------------HNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
+ D F++L L + LQNN++T + ++ KL L+
Sbjct: 153 LPEDFSFESLVEFRLYNSGLIALPDSFFLSRTLKEVYLQNNRLTELPQTIGRSIKLRKLF 212
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQ+T L D+I L +DL N I +
Sbjct: 213 LEGNQITT-LPDEIGCCASLEELDLRNNPIEQL 244
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ + + N L+ + S+ D+ +L+ +NN++ +L G L L KL L + N L AL
Sbjct: 94 LKIIDIAHNRLSEMPGSIAHCRDVEFLYASNNKIAALPGSLKQLDKLLYLNLSDNPLTAL 153
Query: 122 PSDIQLFS----------------------QLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
P D S L +Y NNR+T L + KL+ +
Sbjct: 154 PEDFSFESLVEFRLYNSGLIALPDSFFLSRTLKEVYLQNNRLTELPQTIGRSIKLRKLFL 213
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ NQIT + DE +L+ + L+NN I + S+ L +L L L N+L + L + I
Sbjct: 214 EGNQITTLP-DEIGCCASLEELDLRNNPIEQLPDSIGELKQLRLLDLRKNRL-KTLPESI 271
Query: 220 RGLKRLRTVDLSYNK 234
L+ L +DL +++
Sbjct: 272 LSLENLCKLDLRWSE 286
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
+NN +L S + + L+ L + N++ A+P I ++L L +N+I + +
Sbjct: 8 INNEKLDSF-PVIEDYASLRELSLNGNRISAIPHSIGSAAELKKLSVFDNQIAEIVPEIW 66
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
LT+L+ N+ NQ+ V E NL L I + +N+++ M S++ + +LY S+N
Sbjct: 67 SLTQLEDLNVSKNQLEAV-SSEIGNLTKLKIIDIAHNRLSEMPGSIAHCRDVEFLYASNN 125
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L ++ L +L ++LS N +
Sbjct: 126 KIAA-LPGSLKQLDKLLYLNLSDNPL 150
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
LK L+ L L +N +T + E+ ++ + + + L +L +S L ++L NN
Sbjct: 134 LKQLDKLLYLNLSDNPLTALPEDFSFESLVEFRLYNSGLIALPDSFFLSRTLKEVYLQNN 193
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
RL L +G KL+ L +E NQ+ LP +I + L L NN I L + L +
Sbjct: 194 RLTELPQTIGRSIKLRKLFLEGNQITTLPDEIGCCASLEELDLRNNPIEQLPDSIGELKQ 253
Query: 154 LQVFNMDFNQITMVRRD--EFQNLHNLD 179
L++ ++ N++ + +NL LD
Sbjct: 254 LRLLDLRKNRLKTLPESILSLENLCKLD 281
>gi|328708334|ref|XP_003243661.1| PREDICTED: peroxidasin homolog [Acyrthosiphon pisum]
Length = 467
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 9/190 (4%)
Query: 58 FPPTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQ 115
PP ++L++ NN++ + N + L+ L LFL+ N+++++E G L+ LQ L ++
Sbjct: 65 IPPDTKELYLIKNNISEVKNGAFANLSQLQALFLHRNKIENIETGAFNNLTSLQELNLDD 124
Query: 116 NQLEALPSDIQLF---SQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDE 171
N + L D ++F ++L +LY + N I+ + +G L+KL++ + N+I +
Sbjct: 125 NNIHKL--DFEMFKGLTKLNTLYLSINNISEVKNGAFANLSKLRILFLGENKIENIETGA 182
Query: 172 FQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
F NL +L +SL +N I + S + GLTKL LYLS N ++E L +LR + L
Sbjct: 183 FNNLTSLKILSLDDNNIHKLGSKMFKGLTKLNRLYLSKNNISEVKNGAFANLSKLRALFL 242
Query: 231 SYNKINKFGT 240
NKI T
Sbjct: 243 HRNKIENIET 252
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 65 LHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALP 122
L++ NN++ + N + L+ L LFL N+++++E G L+ L++L ++ N + L
Sbjct: 144 LYLSINNISEVKNGAFANLSKLRILFLGENKIENIETGAFNNLTSLKILSLDDNNIHKLG 203
Query: 123 SDI-QLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
S + + ++L LY + N I+ + +G L+KL+ + N+I + F NL NL
Sbjct: 204 SKMFKGLTKLNRLYLSKNNISEVKNGAFANLSKLRALFLHRNKIENIETGAFNNLANLRV 263
Query: 181 ISLQNNQITSMNSSL-SGLTKLAYLYLSHNQL 211
+ L N I ++ + GLTKL LYL HN +
Sbjct: 264 LQLDYNNIHKLDLEMFKGLTKLNSLYLDHNMI 295
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 34/196 (17%)
Query: 27 HPLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVG-----------FNNLT 73
H L + KG L TL L NNI+ + AF +R L +G FNNLT
Sbjct: 128 HKLDFEMFKGLTKLNTLYLSINNISEVKNGAFANLSKLRILFLGENKIENIETGAFNNLT 187
Query: 74 SL--------------NNSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQL 118
SL + +GLT LN L+L+ N + ++ G LSKL+ L + +N++
Sbjct: 188 SLKILSLDDNNIHKLGSKMFKGLTKLNRLYLSKNNISEVKNGAFANLSKLRALFLHRNKI 247
Query: 119 EALPSDIQLFSQLGSLYA---NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
E + + F+ L +L + N I LD + +GLTKL +D N I + F +
Sbjct: 248 ENI--ETGAFNNLANLRVLQLDYNNIHKLDLEMFKGLTKLNSLYLDHNMIINIPPGTFDS 305
Query: 175 LHNLDSISLQNNQITS 190
L +L + L NN +T
Sbjct: 306 LTSLSLLQLDNNPLTC 321
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMV 167
+L +I+ N E SQL +L+ + N+I +++ G LT LQ N+D N I +
Sbjct: 71 ELYLIKNNISEVKNGAFANLSQLQALFLHRNKIENIETGAFNNLTSLQELNLDDNNIHKL 130
Query: 168 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ F+ L L+++ L N I+ + N + + L+KL L+L N++ L L+
Sbjct: 131 DFEMFKGLTKLNTLYLSINNISEVKNGAFANLSKLRILFLGENKIENIETGAFNNLTSLK 190
Query: 227 TVDLSYNKINKFGTR 241
+ L N I+K G++
Sbjct: 191 ILSLDDNNIHKLGSK 205
>gi|329663462|ref|NP_001192520.1| leucine-rich repeats and immunoglobulin-like domains protein 3
precursor [Bos taurus]
gi|296487540|tpg|DAA29653.1| TPA: leucine-rich repeats and immunoglobulin-like domains 2-like
[Bos taurus]
Length = 1119
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 10/207 (4%)
Query: 39 ALITLL-LVNNNITHI---HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
A ITLL L N I I H F ++ L + NN++ L +L L L +L++N+NR
Sbjct: 121 ANITLLSLAGNKIVEILPEHLRQFQ-SLETLDLSGNNISELKTALPPL-QLKYLYINSNR 178
Query: 95 LKSLE-GQLGTL-SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGL 151
+ S+E G L S L +L + +N++ ALP + QL L N N+I ++DGL +GL
Sbjct: 179 VTSMEPGYFDNLASTLLVLKLNRNRISALPPKMFKLPQLQHLELNRNKIKNIDGLTFQGL 238
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQ 210
L+ M N +T + F L N++ + L +N +T + L GL L L+LS N
Sbjct: 239 GALKSLKMQRNGVTRLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNA 298
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINK 237
++ D ++L +DL+YN +++
Sbjct: 299 ISRISPDAWEFCQKLSELDLTYNHLSR 325
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++ L + N +T L + + GL+++ L L++N L + +G L L LQ L + QN +
Sbjct: 240 ALKSLKMQRNGVTRLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+ D F Q L L N ++ LD GL+ L ++ N++ + F+ L
Sbjct: 300 SRISPDAWEFCQKLSELDLTYNHLSRLDDSSFLGLSLLNTLHIGNNRVNYIADCAFRGLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
+L ++ L+NN+I+ MN + SGL KL L L N++ GL L +DLS
Sbjct: 360 SLKTLDLKNNEISWTIEDMNGAFSGLDKLKRLILQGNRIRSITKKAFTGLDALEHLDLSD 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P+ + F L L + R+ L L + + ++ N+++ ++ +LH+L
Sbjct: 47 CPTPCRCFGDL--LDCSRQRLAHLPEPLP--SWIARLDLSHNRLSFIKASSLSHLHSLRE 102
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ L NN++ ++ + + L L+ N++ E L + +R + L T+DLS N I++ T
Sbjct: 103 VKLNNNELETIPNLGPVTANITLLSLAGNKIVEILPEHLRQFQSLETLDLSGNNISELKT 162
>gi|260836751|ref|XP_002613369.1| hypothetical protein BRAFLDRAFT_68354 [Branchiostoma floridae]
gi|229298754|gb|EEN69378.1| hypothetical protein BRAFLDRAFT_68354 [Branchiostoma floridae]
Length = 790
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 111/209 (53%), Gaps = 7/209 (3%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
G P L ++ + +N +T + +AF P ++ L+ N++T+++ T L+L
Sbjct: 192 FSGLPHLSSVYVGSNRLTSLTSSAFKGSPELKSLYASGNSITAISKDAFTDTSFETLYLT 251
Query: 92 NNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 150
N + +E + L L LQ + ++ N ++ L + QL S+ NN++TS++G+ R
Sbjct: 252 RNAINIVEVEALSPLRNLQRIYLDDNNIKNLEGVFKDLPQLLSVNLRNNKLTSIEGVFRN 311
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHN 209
L KL + + N+I+ + F + L+S+S+ +N + + + + L +L LY+ +N
Sbjct: 312 LPKLSSLSFNDNRISKITNSTFNGVPALESLSIASNNMYEVETGAFRKLDRLVALYMDYN 371
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
Q+ E + GL L+++ ++YN ++ F
Sbjct: 372 QIQEI---SLIGLHALKSLSINYNNLHSF 397
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 13/214 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNNSLRGLTDLN 86
+T+ G PAL +L + +NN+ + AF R L++ +N + + SL GL L
Sbjct: 328 ITNSTFNGVPALESLSIASNNMYEVETGAFRKLDRLVALYMDYNQIQEI--SLIGLHALK 385
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE-ALPSDIQLFSQLGSLYANNNRITSLD 145
L +N N L S L + L+ L + N +E L +L +LY +N IT L
Sbjct: 386 SLSINYNNLHSFPNDLNDANLLEALYLNNNPIEEPLEEQFSALHRLSTLYLSN--ITCLK 443
Query: 146 G-----LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLT 199
G L GL L+ + FN+++ + FQN L ++ LQNN +T +++ L GLT
Sbjct: 444 GTLNSKALCGLDALKELWLSFNELSTLPPSTFQNTTVLSTMWLQNNNLTELSTGLFHGLT 503
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+L L LS+NQL+ D GL +LR + L+ N
Sbjct: 504 ELNQLDLSYNQLSHLDPDTFLGLDKLRFLILTGN 537
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 30/230 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLN-NSLRGLTDLN 86
LTS KG+P L +L N+IT I ++AF T L++ N + + +L L +L
Sbjct: 211 LTSSAFKGSPELKSLYASGNSITAISKDAFTDTSFETLYLTRNAINIVEVEALSPLRNLQ 270
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD- 145
++L++N +K+LEG L +L + + N+L ++ + +L SL N+NRI+ +
Sbjct: 271 RIYLDDNNIKNLEGVFKDLPQLLSVNLRNNKLTSIEGVFRNLPKLSSLSFNDNRISKITN 330
Query: 146 ------------------------GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
G R L +L MD+NQI + LH L S+
Sbjct: 331 STFNGVPALESLSIASNNMYEVETGAFRKLDRLVALYMDYNQIQEI---SLIGLHALKSL 387
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
S+ N + S + L+ L LYL++N + E L + L RL T+ LS
Sbjct: 388 SINYNNLHSFPNDLNDANLLEALYLNNNPIEEPLEEQFSALHRLSTLYLS 437
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 47 NNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQLG 103
NN + I F P+++ + V F N+ L + GL L+ +++ +NRL SL
Sbjct: 157 NNKLVMIQRGLFTDHPSLQIIRVDFGNIAVLEEAAFSGLPHLSSVYVGSNRLTSLTSSAF 216
Query: 104 TLS-KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDF 161
S +L+ L N + A+ D + +LY N I ++ L L LQ +D
Sbjct: 217 KGSPELKSLYASGNSITAISKDAFTDTSFETLYLTRNAINIVEVEALSPLRNLQRIYLDD 276
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N I + F++L L S++L+NN++TS+ L KL+ L + N++++ G
Sbjct: 277 NNIKNLE-GVFKDLPQLLSVNLRNNKLTSIEGVFRNLPKLSSLSFNDNRISKITNSTFNG 335
Query: 222 LKRLRTVDLSYNKINKFGT 240
+ L ++ ++ N + + T
Sbjct: 336 VPALESLSIASNNMYEVET 354
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 91 NNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD-GL 147
+N +L ++E G L L L + N LP+ + L + NN++ + GL
Sbjct: 108 SNLKLSAVEPGTFDNLQTLTDLRLSNNSFTKLPAGLLDSLKNLTNFDCRNNKLVMIQRGL 167
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYL 206
LQ+ +DF I ++ F L +L S+ + +N++TS+ SS G +L LY
Sbjct: 168 FTDHPSLQIIRVDFGNIAVLEEAAFSGLPHLSSVYVGSNRLTSLTSSAFKGSPELKSLYA 227
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
S N +T D T+ L+ N IN
Sbjct: 228 SGNSITAISKDAFTD-TSFETLYLTRNAIN 256
>gi|426329995|ref|XP_004026013.1| PREDICTED: leucine-rich repeat-containing protein 40 [Gorilla
gorilla gorilla]
Length = 602
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
+L + L L+ + N++T + + F+ L NL+ + L NN +T++ +S S L+ L
Sbjct: 142 TLPEEITNLRNLKCLYLQHNELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS N+L L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNELKS-LPAEINRMKRLKHLDCNSN 230
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK+L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKTL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NN +T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ N++ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 204 LSSNELKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLWRNKL 255
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 31 SDDLKGTPALITLLLVNN------------------NITHIHENAFPPTI------RKLH 66
+DDL+ PAL L + +N N++H P I + L+
Sbjct: 98 TDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKTLPEEITNLRNLKCLY 157
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N LT ++ L++L L L+NN L ++ +LS L L + N+L++LP++I
Sbjct: 158 LQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEIN 217
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+L L N+N + ++ L G+ L++ + N++ + EF + L + + N
Sbjct: 218 RMKRLKHLDCNSNLLETIPPELAGMESLELLYLWRNKLRFL--PEFPSCSLLKELHVGEN 275
Query: 187 QITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QI + + L L + L L N+L + D+I L+ L +DLS N I+
Sbjct: 276 QIEMLEAEHLKHLNSILVLDLRDNKLKS-VPDEIILLQSLERLDLSNNDISSL 327
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L SL + + L L N+N L+++ +L + L+LL + +N+L
Sbjct: 198 SLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLWRNKLRF 257
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP + S L L+ N+I L+ L+ L + V ++ N++ V DE L +L+
Sbjct: 258 LP-EFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLE 315
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I+S+ SL L L +L L N L
Sbjct: 316 RLDLSNNDISSLPYSLGNL-HLKFLALEGNPL 346
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N+L + +L L KL L + N L +LP +++ +L ++ + NR L +L +
Sbjct: 459 NKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMKSLVRLQTINLSFNRFKMLPEVLYHIF 518
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L+ + NQ+ V + + + NL ++ LQNN + + L L L L N
Sbjct: 519 TLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGN 575
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ + + FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 451 VSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMKSLVRLQTINLSFNRFKML 510
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 511 PEVLYHIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 566
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 567 LRTLLLDGN 575
>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
56601]
gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
Length = 452
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 23/189 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +T+L + L +L WL L+ N+L +L ++G L LQ L + QNQL LP +I
Sbjct: 242 NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 301
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
L L + N++T+L + L L+V ++D NQ+T + ++
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL + L +NQ+T++ + L L L L NQLT F +IR LK L+
Sbjct: 362 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQE 420
Query: 228 VDLSYNKIN 236
+ L N ++
Sbjct: 421 LHLYLNPLS 429
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + FN+LT+L + L +L L L+ N L +L ++G L LQ L + QN+L L
Sbjct: 73 LQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++T+L +R L LQ +++ N++T + + E L NL ++
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPK-EIGQLQNLKTL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 192 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 244
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 188 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L LQ ++ NQ+T + + E L NL +
Sbjct: 248 PKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPK-EIGQLQNLQEL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+T++ + L L L L +NQLT + +R L+ L+ + L N+++
Sbjct: 307 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLS 360
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L L L L +NRL +L ++G L LQ+L + NQL L
Sbjct: 326 LRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 385
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L + N++T+ +R L LQ ++ N ++ + + L
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIRRL 439
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L +G N L++L + L +L L L +N+L +L ++G L LQ L +++NQL
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTT 407
Query: 121 LPSDIQLFSQLGSLYANNNRITS 143
P +I+ L L+ N ++S
Sbjct: 408 FPKEIRQLKNLQELHLYLNPLSS 430
>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
Length = 447
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT+L + L +L L L N+L +L ++G L +LQ+L + N+L L
Sbjct: 76 LQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEIGQLQRLQILHLAHNKLTTL 135
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N ++++L + L KLQV ++D N+ T + + E L NL +
Sbjct: 136 PEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNERTTLPK-EIGQLQNLQIL 194
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ NQ+T++ + L KL L L+HNQL L +I L+ L+ ++L N++
Sbjct: 195 YLRANQLTNLPKEIIHLQKLQELNLNHNQLI-TLPKEIGKLRNLKILNLEDNQL 247
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 32/222 (14%)
Query: 45 LVNNNITHIHEN---AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
L N I H+ EN P I +L H+ N LT+L + L +L L LN +L
Sbjct: 96 LQNLQILHLCENQLTTLPKEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQL 155
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
+L ++G L KLQ+L ++ N+ LP +I L LY N++T+L + L KLQ
Sbjct: 156 STLPKEIGKLQKLQVLSLDLNERTTLPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQ 215
Query: 156 VFNMDFNQIT----------------------MVRRDEFQNLHNLDSISLQNNQITSMNS 193
N++ NQ+ M+ E + L NL ++L NQ+T++
Sbjct: 216 ELNLNHNQLITLPKEIGKLRNLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTK 275
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L+L NQLT L +I L+ L+ ++L N++
Sbjct: 276 GIGDLQNLKELHLEINQLT-TLPKEIGKLQNLKILNLCNNEL 316
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N LT+L + L +L L L NN L +L +G L LQ L + NQL L
Sbjct: 283 LKELHLEINQLTTLPKEIGKLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTL 342
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN++T+L + L L+V ++D+NQ+T + + E L NL +
Sbjct: 343 PKEIGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPK-EIGQLQNLRQL 401
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+L +NQ+T + + L KL L L +N + + I+ L
Sbjct: 402 NLNHNQLTILPKDIEQLKKLNTLSLRNNPIASKEIKRIQKL 442
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 98/177 (55%), Gaps = 2/177 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N LT+L + L L L LN+N+L +L ++G L L++L +E NQL +P +
Sbjct: 194 LYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLRNLKILNLEDNQLMIIPKE 253
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I+ L L N++T+L + L L+ +++ NQ+T + + E L NL ++L
Sbjct: 254 IEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPK-EIGKLQNLKILNLC 312
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
NN++T++++ + L L L L NQLT L +I L+ L+ +DL N++ +
Sbjct: 313 NNELTTLSNGIGRLQNLQKLDLRFNQLT-TLPKEIGKLQNLKVLDLYNNQLTTLPKK 368
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++G N LT+L + L +L L L N+L +L ++G L L++L + N+L L
Sbjct: 260 LQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEIGKLQNLKILNLCNNELTTL 319
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+ I L L N++T+L + L L+V ++ NQ+T + + + L NL +
Sbjct: 320 SNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLPK-KIGKLQNLKVL 378
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L+HNQLT L DI LK+L T+ L N I
Sbjct: 379 DLDYNQLTTLPKEIGQLQNLRQLNLNHNQLT-ILPKDIEQLKKLNTLSLRNNPI 431
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Query: 46 VNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
++ N+T +N I L N LT L + L +L L LN N+L +L ++G L
Sbjct: 37 IHRNLTEALQNPNEVRILDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQL 96
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
LQ+L + +NQL LP +I +L L+ +N++T+L + L LQ N++ Q++
Sbjct: 97 QNLQILHLCENQLTTLPKEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLS 156
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ + E L L +SL N+ T++ + L L LYL NQLT L +I L++L
Sbjct: 157 TLPK-EIGKLQKLQVLSLDLNERTTLPKEIGQLQNLQILYLRANQLTN-LPKEIIHLQKL 214
Query: 226 RTVDLSYNKI 235
+ ++L++N++
Sbjct: 215 QELNLNHNQL 224
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L + + L +L L L N+L +L +G L L+ L +E NQL L
Sbjct: 237 LKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTL 296
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN +T+L + L LQ ++ FNQ+T + + E L NL +
Sbjct: 297 PKEIGKLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPK-EIGKLQNLKVL 355
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ + L L L L +NQLT L +I L+ LR ++L++N++
Sbjct: 356 DLYNNQLTTLPKKIGKLQNLKVLDLDYNQLT-TLPKEIGQLQNLRQLNLNHNQL 408
>gi|418702924|ref|ZP_13263816.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410767468|gb|EKR38143.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 358
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+ + L +L L+L+NN+L + ++G L LQ L + NQL
Sbjct: 144 LQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 203
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L +N++T++ + L KLQ N+D NQ+T + + E L NL +
Sbjct: 204 PKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPK-EIGQLQNLQVL 262
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ ++ L L L L NQLT L +I LK L+ ++L N++
Sbjct: 263 FLSYNQFKTIPVEFGQLKNLKMLSLDANQLTA-LPKEIGKLKNLKMLNLDANQL 315
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L++N+L L ++ L LQ L + NQ
Sbjct: 26 PLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQF 85
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ P +I+ L LY +NN++T L + L LQ N+ NQ+ + + E + L NL
Sbjct: 86 KTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISK-EIEQLKNL 144
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+T+ + L L LYLS+NQLT F +I L+ L+ + LS N++ F
Sbjct: 145 QKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTF-PKEIGKLQNLQELYLSNNQLTTF 203
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N + + L L+ L+L+NN+L L ++G L LQ L + NQL+ +
Sbjct: 75 LQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTI 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I+ L LY +NN++T+ + L LQ + NQ+T + E L NL +
Sbjct: 135 SKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPK-EIGKLQNLQEL 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L KL +L L NQLT + ++I L++L+ ++L N++
Sbjct: 194 YLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT-IPNEIGKLQKLQELNLDVNQL 246
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L L +R L +L LFLN N+ K+ ++ L L L + NQL L
Sbjct: 52 LQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTIL 111
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN++ ++ + L LQ +D NQ+T + E L NL +
Sbjct: 112 PVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPK-EIGKLQNLQEL 170
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T+ + L L LYLS+NQLT F +I L++L+ + L N++
Sbjct: 171 YLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF-PKEIGKLQKLQWLGLGDNQL 223
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +++ + L +L L+L+NN+L + ++G L LQ L + NQL
Sbjct: 121 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTF 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY +NN++T+ + L KLQ + NQ+T + +E L L +
Sbjct: 181 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI-PNEIGKLQKLQEL 239
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L L L+LS+NQ + + LK L+ + L N++
Sbjct: 240 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPV-EFGQLKNLKMLSLDANQL 292
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 12/186 (6%)
Query: 43 LLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L NN +T FP I KL ++ N LT+ + L L WL L +N+L
Sbjct: 170 LYLSNNQLT-----TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLT 224
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ ++G L KLQ L ++ NQL +P +I L L+ + N+ ++ L L++
Sbjct: 225 TIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKM 284
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
++D NQ+T + + E L NL ++L NQ+ ++ + L L LYL +NQ +
Sbjct: 285 LSLDANQLTALPK-EIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIEEK 343
Query: 217 DDIRGL 222
+ IR L
Sbjct: 344 ERIRKL 349
>gi|260788644|ref|XP_002589359.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
gi|229274536|gb|EEN45370.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
Length = 862
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 3/201 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
L+TL L N +T I E F T + L V NNLTS+ ++ L L L +N L
Sbjct: 14 GLLTLDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLYRLDAYSNMLTR 73
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L +G+L KL L I NQL +PS + L L NN++++ + L KL+
Sbjct: 74 LPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGVEKLQKLREL 133
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ NQ+T V +L NL+ + + NN +++ + L KL LY+ NQLTE +
Sbjct: 134 YINGNQLTEVPSG-VCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTE-VPS 191
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+ L L + +S N ++ F
Sbjct: 192 GVCSLPNLEVLGVSNNNLSTF 212
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 38 PALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NN ++ FPP + R+L++ N LT + + + L +L L ++
Sbjct: 105 PNLEVLSVGNNKLS-----TFPPGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVLGVS 159
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
NN L + + L KL+ L I NQL +PS + L L +NN +++ + L
Sbjct: 160 NNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKL 219
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
KL+ + NQ+T V +L NL+ +S+ NN++++ + L KL LY+ NQL
Sbjct: 220 QKLRELYIYGNQLTEVPSG-VCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYDNQL 278
Query: 212 TEF 214
TE
Sbjct: 279 TEV 281
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 38 PALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NNN++ FPP + R+L++ N LT + + + L +L L ++
Sbjct: 151 PNLEVLGVSNNNLS-----TFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLGVS 205
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
NN L + + L KL+ L I NQL +PS + L L +NN++++ + L
Sbjct: 206 NNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKL 265
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
KL+ + NQ+T V +L +L+ +S+ NN I + + L L LY +
Sbjct: 266 QKLRELYIYDNQLTEVPTG-VCSLPDLEWLSVGNNPIRRLPRQVLQLKTLEKLYAGDCKF 324
Query: 212 TEFLLDDIRGLKRLRTVDLSYN 233
+ + D++ L+ L + L YN
Sbjct: 325 -DMVPDEVGNLQHLWFLALEYN 345
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 38 PALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NN ++ FPP + R+L++ N LT + + L DL WL +
Sbjct: 243 PNLEVLSVSNNKLS-----TFPPGVEKLQKLRELYIYDNQLTEVPTGVCSLPDLEWLSVG 297
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR-- 149
NN ++ L Q+ L L+ L + + +P ++ L L N + +L +R
Sbjct: 298 NNPIRRLPRQVLQLKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALEYNLLKTLPSTMRHL 357
Query: 150 -GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
L ++++++ F+ V L ++ + ++NN IT + ++L KL L +S
Sbjct: 358 HNLREVRLWSNKFDTFPEV----LCELPAMEKLVIRNNNITRLPTALHRADKLKDLDVSG 413
Query: 209 NQLT 212
N LT
Sbjct: 414 NPLT 417
>gi|392966514|ref|ZP_10331933.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
3]
gi|387845578|emb|CCH53979.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
3]
Length = 925
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ 130
NL+SL S+ LT L L+L +N+L L +G L++L L + NQL LP I +Q
Sbjct: 29 NLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQ 88
Query: 131 LGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L SL ++N++ L + LT+L ++ NQ+T++ + L+ L + L NQ+T
Sbjct: 89 LTSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVL-PESIGQLNQLTRLDLHTNQLTV 147
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ S+ LT+L L LS+NQLT+ L + I L +L +DL N++
Sbjct: 148 LPESIGQLTQLTRLDLSNNQLTD-LPESIGQLTQLTELDLPNNQL 191
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N LT L S+ LT L L L++N+L L + L++L L + NQL LP
Sbjct: 45 RLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVLPE 104
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I +QL L + N++T L + L +L ++ NQ+T++ + L L + L
Sbjct: 105 SISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVL-PESIGQLTQLTRLDL 163
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NNQ+T + S+ LT+L L L +NQLT+ L + I L +L +DL N++
Sbjct: 164 SNNQLTDLPESIGQLTQLTELDLPNNQLTD-LPESIGQLTQLTELDLRNNEL 214
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L L S+ LT L L L+ N+L L +G L++L L + NQL LP I +
Sbjct: 97 NQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVLPESIGQLT 156
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
QL L +NN++T L + LT+L ++ NQ+T + + L L + L+NN++T
Sbjct: 157 QLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDL-PESIGQLTQLTELDLRNNELT 215
Query: 190 SMNSSLSGLTKLAYLYLSHNQLT 212
++ S+ LT+L L L N+LT
Sbjct: 216 TLPESIGQLTQLRELSLHTNELT 238
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + N LT L S+ LT L L L+NN+L L +G L++L L + NQL LP
Sbjct: 137 RLDLHTNQLTVLPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLPE 196
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
I +QL L NN +T+L + LT+L+ ++ N++T++ +
Sbjct: 197 SIGQLTQLTELDLRNNELTTLPESIGQLTQLRELSLHTNELTVLPK 242
>gi|449279622|gb|EMC87166.1| Leucine-rich repeat protein SHOC-2 [Columba livia]
Length = 582
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L ++++ LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L
Sbjct: 115 LPSAIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRML 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L+ L + FN+IT V +D +NL L +S++ N+I + +
Sbjct: 175 DLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L ++I ++ +DL +N++
Sbjct: 234 IGELCNLITLDVAHNQL-EHLPEEIGSCMQITNLDLQHNEL 273
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++ FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE
Sbjct: 193 SLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I Q+ +L +N + L + L+ L + +N+++ + + LD
Sbjct: 253 LPEEIGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKS-LAKCSELDE 311
Query: 181 ISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK-- 237
++L+NN I+++ LS L KL L L+ N + + + ++++ +N+INK
Sbjct: 312 LNLENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIP 371
Query: 238 FGTRNEGK 245
FG + K
Sbjct: 372 FGIFSRAK 379
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ S L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + ++ L L HN+L + L + I L L + L YN+++
Sbjct: 246 AHNQLEHLPEEIGSCMQITNLDLQHNELLD-LPETIGNLSSLSRLGLRYNRLSAI 299
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+++ SL ++L+ L L NN + +L EG L +L KL L + +N +
Sbjct: 285 SLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLARNCFQ 344
Query: 120 ALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+ P FS + SL +NRI + G+ L NM NQ+T + D F +
Sbjct: 345 SYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTS 403
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+T + +SGL L L LS+N L + L I L++LR +DL NK+
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKK-LPHGIGNLRKLRELDLEENKL 460
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L +G L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVF------------------------NM 159
+ S+L L NN I++L +GLL L KL NM
Sbjct: 303 LAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|456969516|gb|EMG10507.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 235
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N +T+L + L +L L LN NRL+++ ++G L L+ L IE N+L+ L
Sbjct: 75 LKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL +L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQ-EIKNLESLLEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
L +NQ T++ + L L L L NQL LL +I LK
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LLPEIGNLK 234
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L+L+ N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L + L N++T
Sbjct: 120 NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQ-EIGNLRKLQRMHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLESLLEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
>gi|428184715|gb|EKX53569.1| hypothetical protein GUITHDRAFT_100553 [Guillardia theta CCMP2712]
Length = 949
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 27/201 (13%)
Query: 42 TLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL 98
TL L I++I + F ++ L + N L+SL + + LT L L L+ N+L SL
Sbjct: 30 TLRLTYRGISNISQGTFNGLSSLYTLDLSHNQLSSLPAGAFQNLTGLYQLKLDYNQLSSL 89
Query: 99 E-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
E G LS L LV+ NQL +LP+ G +GL L
Sbjct: 90 ERGSFDGLSSLHTLVLSDNQLSSLPA----------------------GAFQGLASLYEL 127
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLL 216
+D+NQ++ + R F L L ++ L NQ++ + + + GL L L+L +NQL+
Sbjct: 128 RLDYNQLSGLERGSFDGLSGLYTLVLSYNQLSLLPAGAFQGLASLYELWLCYNQLSGLER 187
Query: 217 DDIRGLKRLRTVDLSYNKINK 237
GL L T+DLSYN+++
Sbjct: 188 GSFDGLSSLHTLDLSYNQLSS 208
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLN----NSLRGLTD 84
L + +G +L L L NN ++ + +F + LH + L+ + +GL
Sbjct: 209 LPAGAFQGLASLYELWLYNNQLSSLERGSFD-GLSSLHTLELSSNLLSSLPAGAFQGLAS 267
Query: 85 LNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 142
L L L++N+L LE G LS L L + NQL LP+ Q ++L L +
Sbjct: 268 LYELRLDSNQLSILERGSFDGLSSLYTLFLSYNQLSLLPAGAFQNLTRLSYLSLRRGMTS 327
Query: 143 SLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTK 200
SL+ G GL+ L ++ +NQ++ + FQNL L + L NNQ++S+ S GLT
Sbjct: 328 SLERGSFDGLSSLHTLDLSYNQLSSLPAGAFQNLSGLYQLKLDNNQLSSLERGSFDGLTG 387
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L LYL NQL+ +GL L + L N+++
Sbjct: 388 LHTLYLYKNQLSSLPAGAFQGLASLYELWLYNNQLSS 424
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFL 90
+G +L L L +N ++ + +F ++ L + +N L+ L + + LT L++L L
Sbjct: 262 FQGLASLYELRLDSNQLSILERGSFDGLSSLYTLFLSYNQLSLLPAGAFQNLTRLSYLSL 321
Query: 91 NNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSLD- 145
SLE G LS L L + NQL +LP+ F L LY +NN+++SL+
Sbjct: 322 RRGMTSSLERGSFDGLSSLHTLDLSYNQLSSLPAGA--FQNLSGLYQLKLDNNQLSSLER 379
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYL 204
G GLT L + NQ++ + FQ L +L + L NNQ++S+ S GL+ L L
Sbjct: 380 GSFDGLTGLHTLYLYKNQLSSLPAGAFQGLASLYELWLYNNQLSSLERGSFDGLSSLYIL 439
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L+ +QL+ +GL L + L YN+++
Sbjct: 440 DLAKHQLSSLPAGAFQGLASLYELLLYYNQLSS 472
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 31/215 (14%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
L + +G +L L L NN ++ + +F ++ L + + L+SL + +GL L
Sbjct: 401 LPAGAFQGLASLYELWLYNNQLSSLERGSFDGLSSLYILDLAKHQLSSLPAGAFQGLASL 460
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L L N+L SLE G LS L L++ NQL +LP+ Q + L LY + N+++S
Sbjct: 461 YELLLYYNQLSSLELGSFDGLSSLHTLILSDNQLSSLPAGAFQGLANLQYLYLHPNQLSS 520
Query: 144 LD-------------------------GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L+ G +GL LQ + +NQ++ + R F L +L
Sbjct: 521 LERGSFDGLSSLQFLGLTSQQLSSLPAGAFQGLASLQTLYLGYNQLSSLERGSFDGLSSL 580
Query: 179 DSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLT 212
S+ L NQ++S+ + + GL L LYL +NQL+
Sbjct: 581 YSLFLSYNQLSSLPAGAFQGLASLYELYLGYNQLS 615
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 55/256 (21%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G +L TL L +N ++ + AF + +L + +N L+SL S GL+ L+ L L++
Sbjct: 48 GLSSLYTLDLSHNQLSSLPAGAFQNLTGLYQLKLDYNQLSSLERGSFDGLSSLHTLVLSD 107
Query: 93 NRLKSL-------------------------EGQLGTLSKLQLLVIEQNQLEALPSD-IQ 126
N+L SL G LS L LV+ NQL LP+ Q
Sbjct: 108 NQLSSLPAGAFQGLASLYELRLDYNQLSGLERGSFDGLSGLYTLVLSYNQLSLLPAGAFQ 167
Query: 127 LFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+ L L+ N+++ L+ G GL+ L ++ +NQ++ + FQ L +L + L N
Sbjct: 168 GLASLYELWLCYNQLSGLERGSFDGLSSLHTLDLSYNQLSSLPAGAFQGLASLYELWLYN 227
Query: 186 NQITSMN-------------------------SSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQ++S+ + GL L L L NQL+
Sbjct: 228 NQLSSLERGSFDGLSSLHTLELSSNLLSSLPAGAFQGLASLYELRLDSNQLSILERGSFD 287
Query: 221 GLKRLRTVDLSYNKIN 236
GL L T+ LSYN+++
Sbjct: 288 GLSSLYTLFLSYNQLS 303
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 115/236 (48%), Gaps = 34/236 (14%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHV-----------GFNNLTSL 75
L + +G +L L L N ++ + +F P+I L + F NLT L
Sbjct: 593 LPAGAFQGLASLYELYLGYNQLSGLERGSFDGMPSIYHLDLSSNLLSSLPAGAFQNLTGL 652
Query: 76 NN---------SL-RGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD 124
N+ SL RGL +L WL+ N +L LE G LS L LV+ NQL +LP+
Sbjct: 653 NSLYLYSNQLSSLERGLYEL-WLYYN--QLSGLERGSFDGLSSLHTLVLSYNQLSSLPAG 709
Query: 125 IQLFSQLGSLYA---NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
F L SLY ++N+++SL+ G GL+ L + NQ++ + FQ L +L S
Sbjct: 710 A--FQGLASLYELRLDSNQLSSLERGSFDGLSTLYTLILSSNQLSSLPAGAFQGLTSLGS 767
Query: 181 ISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
I L NQ++S+ S GL+ L L LS+N+LT D L L+ LS N +
Sbjct: 768 IDLDYNQLSSLERGSFDGLSSLQSLRLSNNRLTFIPSDAFASLPPLKYFTLSSNPL 823
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGF--NNLTSL-NNSLRGLTDL 85
L + +G +L TL L N ++ + +F + N L+SL + +GL L
Sbjct: 545 LPAGAFQGLASLQTLYLGYNQLSSLERGSFDGLSSLYSLFLSYNQLSSLPAGAFQGLASL 604
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L+L N+L LE G + + L + N L +LP+ Q + L SLY +N+++S
Sbjct: 605 YELYLGYNQLSGLERGSFDGMPSIYHLDLSSNLLSSLPAGAFQNLTGLNSLYLYSNQLSS 664
Query: 144 LD------------------GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
L+ G GL+ L + +NQ++ + FQ L +L + L +
Sbjct: 665 LERGLYELWLYYNQLSGLERGSFDGLSSLHTLVLSYNQLSSLPAGAFQGLASLYELRLDS 724
Query: 186 NQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
NQ++S+ S GL+ L L LS NQL+ +GL L ++DL YN+++
Sbjct: 725 NQLSSLERGSFDGLSTLYTLILSSNQLSSLPAGAFQGLTSLGSIDLDYNQLSS 777
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRL 95
L L L N ++ + +F ++ L + +N L+SL + +GL L L L++N+L
Sbjct: 668 GLYELWLYYNQLSGLERGSFDGLSSLHTLVLSYNQLSSLPAGAFQGLASLYELRLDSNQL 727
Query: 96 KSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GLLRGLT 152
SLE G LS L L++ NQL +LP+ Q + LGS+ + N+++SL+ G GL+
Sbjct: 728 SSLERGSFDGLSTLYTLILSSNQLSSLPAGAFQGLTSLGSIDLDYNQLSSLERGSFDGLS 787
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
LQ + N++T + D F +L L +L +N + + SS
Sbjct: 788 SLQSLRLSNNRLTFIPSDAFASLPPLKYFTLSSNPLECVFSS 829
>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 475
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 23/189 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +T+L + L +L WL L+ N+L +L ++G L LQ L + QNQL LP +I
Sbjct: 265 NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 324
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
L L + N++T+L + L L+V ++D NQ+T + ++
Sbjct: 325 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 384
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL + L +NQ+T++ + L L L L NQLT F +IR LK L+
Sbjct: 385 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQE 443
Query: 228 VDLSYNKIN 236
+ L N ++
Sbjct: 444 LHLYLNPLS 452
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 211 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L LQ ++ NQ+T + + E L NL +
Sbjct: 271 PKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPK-EIGQLQNLQEL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+T++ + L L L L +NQLT + +R L+ L+ + L N+++
Sbjct: 330 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLS 383
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQ---- 115
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L++ Q
Sbjct: 165 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 224
Query: 116 -----------------NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
NQL LP +I L L NRIT+L + L LQ +
Sbjct: 225 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 284
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T + + E L NL + L NQ+T++ + L L L L NQLT L +
Sbjct: 285 LHQNQLTTLPK-EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKE 342
Query: 219 IRGLKRLRTVDLSYNKI 235
I L+ LR +DL N++
Sbjct: 343 IEQLQNLRVLDLDNNQL 359
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ LT+L + L +L L L+ N L +L ++G L LQ L + QN+L L
Sbjct: 96 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++T+L +R L LQ ++ NQ+T + + E L NL ++
Sbjct: 156 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK-EIGQLQNLKTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 215 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 267
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + FN+LT+L + L +L L LN+ +L +L ++G L LQ L + N L L
Sbjct: 73 LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L L + NR+ +L + L LQ +++ N++T + + E + L NL +
Sbjct: 133 PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK-EIRQLRNLQEL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L QLT L +I L+ L+T++L N++
Sbjct: 192 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT-TLPKEIGELQNLKTLNLLDNQL 244
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L L L L +NRL +L ++G L LQ+L + NQL L
Sbjct: 349 LRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 408
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L + N++T+ +R L LQ ++ N ++ + + L
Sbjct: 409 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIRRL 462
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L +G N L++L + L +L L L +N+L +L ++G L LQ L +++NQL
Sbjct: 371 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTT 430
Query: 121 LPSDIQLFSQLGSLYANNNRITS 143
P +I+ L L+ N ++S
Sbjct: 431 FPKEIRQLKNLQELHLYLNPLSS 453
>gi|421129287|ref|ZP_15589488.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410359483|gb|EKP06581.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 448
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ + +LT L + L+ L L+L N+L +L ++G L KLQ L + N L L
Sbjct: 280 LRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTL 339
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L +LY N+IT+ + L LQ N+ FNQ+T + + E L NL +
Sbjct: 340 PKEIEQLQKLQTLYLEGNQITTFPKEIGQLKNLQELNLGFNQLTTLPQ-EIGQLQNLQEL 398
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+L+ NQ+ ++ + L KL L L +N + ++ IR L
Sbjct: 399 NLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKL 439
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++GFN LT+L + L +L L L +N L +L ++G L KLQ L + QL+ L
Sbjct: 211 LQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L L N +T L + L+KLQ + NQ+T + +E L L +
Sbjct: 271 PQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTL-PEEIGQLKKLQEL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NN + ++ + L KL LYL NQ+T F +I LK L+ ++L +N++
Sbjct: 330 YLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTF-PKEIGQLKNLQELNLGFNQL 382
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L LN L L ++G LSKLQ L + NQL LP +I +L
Sbjct: 267 LKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKL 326
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY NN + +L + L KLQ ++ NQIT + E L NL ++L NQ+T++
Sbjct: 327 QELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPK-EIGQLKNLQELNLGFNQLTTL 385
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQL L ++ L++LR ++L N I
Sbjct: 386 PQEIGQLQNLQELNLEFNQLAT-LPKEVGQLQKLRKLNLYNNPI 428
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P R L++ + L +L+ + L +L L+LN N+L +L ++G L L
Sbjct: 39 NLTEALQN--PKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q+L + N+L LP +I L L NR+T L + L LQV N+D N++T++
Sbjct: 97 QVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILP 156
Query: 169 R----------------------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
++ L NL ++ Q NQ+T+ + L KL L L
Sbjct: 157 EKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNL 216
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+LT L +++ L+ L+ +DL N +
Sbjct: 217 GFNRLTT-LREEVVQLQNLQILDLISNPL 244
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+ + L L L L NRL +L ++ L LQ+L + N L LP +I
Sbjct: 196 NQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI---G 252
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQ---VFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
QL L N L L +G+ +LQ N+++ +T++ + E L L + L N
Sbjct: 253 QLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPK-EIGQLSKLQKLYLYGN 311
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
Q+T++ + L KL LYL +N L L +I L++L+T+ L N+I F
Sbjct: 312 QLTTLPEEIGQLKKLQELYLGNNPL-RTLPKEIEQLQKLQTLYLEGNQITTF 362
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++GFN LT L + + L +L L L+ N+L L ++G L LQ+L + N+L LP
Sbjct: 122 LNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEK 181
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLDSIS 182
I L L + N++T+ + L KLQ N+ FN++T +R + + QNL LD IS
Sbjct: 182 IGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLIS 241
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
N +T++ + L KL L L QL + L I L+ LR ++L+Y
Sbjct: 242 ---NPLTTLPKEIGQLQKLQELNLYGIQL-KTLPQGIIQLQNLRGLNLNY 287
>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 399
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 8/190 (4%)
Query: 52 HIHENAFPPTI---RKLH---VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
H H + P +I +KLH + N+LT L S+ L L L+L++N+L L +G L
Sbjct: 78 HNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGKL 137
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
L +L + N L LP I L SLY N N++ L + L LQ + N++
Sbjct: 138 EHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNRLQ 197
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ +E L NL +S+ N + + S+ L L L+LSHN+LT FL I LK L
Sbjct: 198 SI-PEEIGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLT-FLPASIAQLKTL 255
Query: 226 RTVDLSYNKI 235
+ + L YNK+
Sbjct: 256 KDLYLLYNKL 265
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 25/197 (12%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLN-----------------------NNRLKSLEGQ 101
L++G N+L L S+ L +L L+LN +NRL+S+ +
Sbjct: 143 LNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEE 202
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L L+ L ++ N L +P I L L+ ++NR+T L + L L+ + +
Sbjct: 203 IGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLY 262
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N++T + F L +L I+L +N+IT+ +++ LT+L L L NQLT L ++
Sbjct: 263 NKLTGLPPG-FGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSNQLTS-LPANVGN 320
Query: 222 LKRLRTVDLSYNKINKF 238
L++L + L+ N++ K
Sbjct: 321 LEQLEVLSLNDNQLIKL 337
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N LT L S+ L L L+L N+L L G L L+ + + N++
Sbjct: 232 LKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTF 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I +QL SL ++N++TSL + L +L+V +++ NQ+ + + L NL ++
Sbjct: 292 PIAITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKLPKS-IGKLTNLTTL 350
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
SL NN++T + + L L YL L N ++
Sbjct: 351 SLINNKLTDVPIEIQNLPNLEYLVLEGNPIS 381
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L V N+L + S+ L L L L++NRL L + L L+ L + N+L L
Sbjct: 209 LKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGL 268
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P L + ++NRIT+ + LT+L+ +D NQ+T + + NL L+ +
Sbjct: 269 PPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSNQLTSLPAN-VGNLEQLEVL 327
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
SL +NQ+ + S+ LT L L L +N+LT+ + +I+ L L + L N I+
Sbjct: 328 SLNDNQLIKLPKSIGKLTNLTTLSLINNKLTDVPI-EIQNLPNLEYLVLEGNPIS 381
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
+ S+ ++L+ ++ L ++N +L SL + L L +L + N++E LPS I
Sbjct: 9 YKGYKSMKDALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKL 68
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
QL L+ N+N + +L + L KL ++ N +T + + L +L+ + L +NQ+
Sbjct: 69 QQLEELWFNHNHLHTLPESIGKLKKLHELWLNHNHLTKL-PESIGELDHLEDLWLDHNQL 127
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
T + S+ L L L L HN L E L + I L+ L+++ L+ NK+
Sbjct: 128 TVLPESIGKLEHLGILNLGHNDLIE-LPESISKLQNLKSLYLNKNKL 173
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P + KL++ LTSL + L L L ++ N+++ L + L +L+ L N L
Sbjct: 22 PEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWFNHNHL 81
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP I +L L+ N+N +T L + L L+ +D NQ+T V + L +L
Sbjct: 82 HTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLT-VLPESIGKLEHL 140
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +N + + S+S L L LYL+ N+L L + I L+ L+ +D N++
Sbjct: 141 GILNLGHNDLIELPESISKLQNLKSLYLNKNKLA-VLPESIGLLQNLQYLDAQSNRL 196
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T++ L++ +N LT L L L + L++NR+ + + L++L+ L ++ NQL +
Sbjct: 254 TLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSNQLTS 313
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+++ QL L N+N++ L + LT L ++ N++T V E QNL NL+
Sbjct: 314 LPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLSLINNKLTDVPI-EIQNLPNLEY 372
Query: 181 ISLQNNQIT 189
+ L+ N I+
Sbjct: 373 LVLEGNPIS 381
>gi|158255498|dbj|BAF83720.1| unnamed protein product [Homo sapiens]
Length = 1065
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P + L + N ++ + S L +L L+NNR+ +
Sbjct: 122 ITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITT 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M + I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRSGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + + ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRSGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 498
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 23/189 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +T+L + L +L WL L+ N+L +L ++G L LQ L + QNQL LP +I
Sbjct: 288 NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 347
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
L L + N++T+L + L L+V ++D NQ+T + ++
Sbjct: 348 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 407
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL + L +NQ+T++ + L L L L NQLT F +IR LK L+
Sbjct: 408 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQE 466
Query: 228 VDLSYNKIN 236
+ L N ++
Sbjct: 467 LHLYLNPLS 475
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 234 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 293
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L LQ ++ NQ+T + + E L NL +
Sbjct: 294 PKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPK-EIGQLQNLQEL 352
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+T++ + L L L L +NQLT + +R L+ L+ + L N+++
Sbjct: 353 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLS 406
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQ---- 115
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L++ Q
Sbjct: 188 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 247
Query: 116 -----------------NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
NQL LP +I L L NRIT+L + L LQ +
Sbjct: 248 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 307
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T + + E L NL + L NQ+T++ + L L L L NQLT L +
Sbjct: 308 LHQNQLTTLPK-EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKE 365
Query: 219 IRGLKRLRTVDLSYNKI 235
I L+ LR +DL N++
Sbjct: 366 IEQLQNLRVLDLDNNQL 382
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ LT+L + L +L L L+ N L +L ++G L LQ L + QN+L L
Sbjct: 119 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++T+L +R L LQ ++ NQ+T + + E L NL ++
Sbjct: 179 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK-EIGQLQNLKTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 238 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 290
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + FN+LT+L + L +L L LN+ +L +L ++G L LQ L + N L L
Sbjct: 96 LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L L + NR+ +L + L LQ +++ N++T + + E + L NL +
Sbjct: 156 PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK-EIRQLRNLQEL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L QLT L +I L+ L+T++L N++
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT-TLPKEIGELQNLKTLNLLDNQL 267
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L L L L +NRL +L ++G L LQ+L + NQL L
Sbjct: 372 LRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 431
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L + N++T+ +R L LQ ++ N ++ + + L
Sbjct: 432 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIRRL 485
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L +G N L++L + L +L L L +N+L +L ++G L LQ L +++NQL
Sbjct: 394 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTT 453
Query: 121 LPSDIQLFSQLGSLYANNNRITS 143
P +I+ L L+ N ++S
Sbjct: 454 FPKEIRQLKNLQELHLYLNPLSS 476
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
K++ L + +L LP +I L L + N +T L + L LQ ++ FN +T
Sbjct: 49 KVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTT 108
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ + E L NL ++L + ++T++ + L L L LS N LT L ++ L+ L+
Sbjct: 109 LPK-EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLT-TLPKEVGQLENLQ 166
Query: 227 TVDLSYNKI 235
+DL N++
Sbjct: 167 RLDLHQNRL 175
>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
Length = 1124
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
L+ L + + +L++LQ L + +NQ+ LP I +QL +L +NN++T L +
Sbjct: 27 LSKIELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPEAIA 86
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L +LQ ++ NQ+T + + +L L ++L+NNQ+T + +++ LT+L L LS+N
Sbjct: 87 SLARLQRLDLSNNQLTEL-PEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSNN 145
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QLTE L + I L +L++ DLS+N++ +
Sbjct: 146 QLTE-LPEAIASLTQLQSFDLSHNELTEL 173
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 3/166 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N +T L ++ LT L L L+NN+L L + +L++LQ L + NQL L
Sbjct: 45 LQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPEAIASLARLQRLDLSNNQLTEL 104
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I +QL L NN++T L + LT+LQ ++ NQ+T + + +L L S
Sbjct: 105 PEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSNNQLTEL-PEAIASLTQLQSF 163
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--LLDDIRGLKRL 225
L +N++T + +SLS L L N L + ++ +++GLK L
Sbjct: 164 DLSHNELTELPNSLSRLLYLEIFDCGSNLLRQVPSVIKELKGLKEL 209
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ 130
LT + ++ LT L L L+ N++ L + +L++LQ L + N+L LP I ++
Sbjct: 31 ELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPEAIASLAR 90
Query: 131 LGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L L +NN++T L + L +LQ N+ NQ+T + + +L L + L NNQ+T
Sbjct: 91 LQRLDLSNNQLTELPEAIASLAQLQELNLRNNQLTEL-PEAIASLTRLQRLDLSNNQLTE 149
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEF 214
+ +++ LT+L LSHN+LTE
Sbjct: 150 LPEAIASLTQLQSFDLSHNELTEL 173
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 45 LVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L NN +T + E A +++L++ N LT L ++ LT L L L+NN+L L +
Sbjct: 96 LSNNQLTELPEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSNNQLTELPEAIA 155
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN---RITSLDGLLRGLTKLQVFNMD 160
+L++LQ + N+L LP+ + L +N ++ S+ L+GL +L ++ D
Sbjct: 156 SLTQLQSFDLSHNELTELPNSLSRLLYLEIFDCGSNLLRQVPSVIKELKGLKELYIYAND 215
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
I D LH L+ +S+ NQI+ + SL L L ++ L +
Sbjct: 216 LEVIPSWICD----LHVLEILSIGGNQISELPKSLDKLQSLEFIILGAD 260
>gi|301765750|ref|XP_002918301.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2-like [Ailuropoda melanoleuca]
Length = 1224
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 8/211 (3%)
Query: 36 GTPAL-ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
G P ITLL LV+N I I+ AF P + L + N ++ + S L +L L+
Sbjct: 275 GEPTCNITLLSLVHNIIPEINAEAFQFYPALENLDLSSNIISEIKTSSFPRMQLKYLNLS 334
Query: 92 NNRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-L 148
NNR+ LE G LS L+V + +N++ +P I L L NRI ++GL
Sbjct: 335 NNRITILEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKVVEGLTF 394
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLS 207
+GL L+ M N I+ ++ F L N++ + L+ N +T +N L GL L LY+S
Sbjct: 395 QGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEYNNLTEVNKGWLYGLRMLQQLYVS 454
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N + D +RL +DLSYN++ +
Sbjct: 455 QNAVERISPDAWEFCQRLSELDLSYNQLTRL 485
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
+G +L +L + N I+ + + AF G +N+ L LT++N
Sbjct: 394 FQGLDSLRSLKMQRNGISKLKDGAF--------FGLDNMEELELEYNNLTEVN------- 438
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGL 151
+G L L LQ L + QN +E + D F Q L L + N++T LD GL
Sbjct: 439 -----KGWLYGLRMLQQLYVSQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFLGL 493
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLS 207
+ L+ N+ N++T + F+ L NL +++L+NN+I+ + + +GLT L L L
Sbjct: 494 SLLERLNLGDNRVTHIADGVFRFLSNLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQ 553
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ+ GL+ L +DL+ N I
Sbjct: 554 GNQIKSITKKAFIGLESLEHLDLNNNAI 581
>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 410
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + + LTSL + L +L LFLN NRL SL ++G L L+ L + NQL +L
Sbjct: 74 LRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTSL 133
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L ++NR T+L + L LQ ++ NQ T + + E L NL +
Sbjct: 134 PKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPK-EIGQLQNLQKL 192
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NN+ T++ + L L L LS NQ T L +IR + +R ++L+ N++
Sbjct: 193 DLSNNRFTTLPKEVGQLQSLEELDLSGNQFTT-LPKEIRRRQNIRWLNLAGNQL 245
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 59 PPTIRKLHVGFN--NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
P + +L FN LTS+ N++ L +L L L ++L SL ++G L LQ L + N
Sbjct: 46 PENVFELSFLFNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNIN 105
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+L +LP +I L L+ + N++TSL + L LQ ++ N+ T + + E L
Sbjct: 106 RLSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPK-EIGQLQ 164
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL + L NQ T++ + L L L LS+N+ T L ++ L+ L +DLS N+
Sbjct: 165 NLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTT-LPKEVGQLQSLEELDLSGNQF 222
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N T+L +R ++ WL L N+L SL ++G LQ L + +N+
Sbjct: 211 SLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTT 270
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L +L + NR T+ +R + +D NQ+ + + E +L+
Sbjct: 271 LPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPK-EIGQFQHLEG 329
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL--LDDIRGLKRLRTVDLSYN 233
+ L+ NQ+TS+ + L L L LS N+ T F ++ ++ LK LR S++
Sbjct: 330 LFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNSFS 384
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N T+L + L +L L L+NNR +L ++G L L+ L + NQ L
Sbjct: 166 LQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ + L N++TSL + LQ ++ N+ T + + E L NL+++
Sbjct: 226 PKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPK-EIGQLQNLETL 284
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+L N+ T+ + + +LYL NQL
Sbjct: 285 NLSGNRFTTFPKEVRRQENITWLYLDDNQL 314
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N T+ +R ++ WL+L++N+LK+L ++G L+ L ++ NQL +LP +
Sbjct: 284 LNLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGNQLTSLPKE 343
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
I+ L L + NR T+ + L L++ + N ++ + E Q L
Sbjct: 344 IEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNSFSLEEKQEIQKL 394
>gi|398339753|ref|ZP_10524456.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
Length = 448
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ + +LT L + L+ L L+L N+L +L ++G L KLQ L + N L L
Sbjct: 280 LRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTL 339
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L +LY N+IT+ + L LQ N+ FNQ+T + + E L NL +
Sbjct: 340 PKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQ-EIGQLQNLQEL 398
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+L+ NQ+ ++ + L KL L L +N + ++ IR L
Sbjct: 399 NLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKL 439
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L LN L L ++G LSKLQ L + NQL LP +I +L
Sbjct: 267 LKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKL 326
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY NN + +L + L KLQ ++ NQIT + E L NL ++L NQ+T++
Sbjct: 327 QELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPK-EIGQLQNLQELNLGFNQLTTL 385
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQL L ++ L++LR ++L N I
Sbjct: 386 PQEIGQLQNLQELNLEFNQLAT-LPKEVGQLQKLRKLNLYNNPI 428
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++GFN LT+L + L +L L L +N L +L ++G L KLQ L + QL+ L
Sbjct: 211 LQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L L N +T L + L+KLQ + NQ+T + +E L L +
Sbjct: 271 PQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTL-PEEIGQLKKLQEL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NN + ++ + L KL LYL NQ+T F +I L+ L+ ++L +N++
Sbjct: 330 YLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTF-PKEIGQLQNLQELNLGFNQL 382
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P R L++ + L +L+ + L +L L+LN N+L +L ++G L L
Sbjct: 39 NLTEALQN--PKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q+L + N+L LP +I L L NR+T L + L LQV N+D N++T++
Sbjct: 97 QVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILP 156
Query: 169 R----------------------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
++ L NL ++ Q NQ+T+ + L KL L L
Sbjct: 157 EKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNL 216
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+LT L +++ L+ L+ +DL N +
Sbjct: 217 GFNRLTT-LREEVVQLQNLQILDLISNPL 244
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+ + L L L L NRL +L ++ L LQ+L + N L LP +I
Sbjct: 196 NQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI---G 252
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQ---VFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
QL L N L L +G+ +LQ N+++ +T++ + E L L + L N
Sbjct: 253 QLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPK-EIGQLSKLQKLYLYGN 311
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
Q+T++ + L KL LYL +N L L +I L++L+T+ L N+I F
Sbjct: 312 QLTTLPEEIGQLKKLQELYLGNNPL-RTLPKEIEQLQKLQTLYLEGNQITTF 362
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++GFN LT L + + L +L L L+ N+L L ++G L LQ+L + N+L L
Sbjct: 119 LQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTIL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P I L L + N++T+ + L KLQ N+ FN++T +R + + QNL LD
Sbjct: 179 PEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILD 238
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
IS N +T++ + L KL L L QL + L I L+ LR ++L+Y
Sbjct: 239 LIS---NPLTTLPKEIGQLQKLQELNLYGIQL-KTLPQGIIQLQNLRGLNLNY 287
>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 455
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 23/189 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +T+L + L +L WL L+ N+L +L ++G L LQ L + QNQL LP +I
Sbjct: 242 NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 301
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
L L + N++T+L + L L+V ++D NQ+T + ++
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL + L +NQ+T++ + L L L L NQLT F +IR LK L+
Sbjct: 362 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQE 420
Query: 228 VDLSYNKIN 236
+ L N ++
Sbjct: 421 LHLYLNPLS 429
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL--VIEQ---- 115
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L ++ Q
Sbjct: 142 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTL 201
Query: 116 -----------------NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
NQL LP +I L L NRIT+L + L LQ +
Sbjct: 202 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 261
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T + + E L NL + L NQ+T++ + L L L L NQLT L +
Sbjct: 262 LHQNQLTTLPK-EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKE 319
Query: 219 IRGLKRLRTVDLSYNKI 235
I L+ LR +DL N++
Sbjct: 320 IEQLQNLRVLDLDNNQL 336
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L+ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 188 LKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T+L + L LQ ++ NQ+T + + E L NL +
Sbjct: 248 PKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPK-EIGQLQNLQEL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+T++ + L L L L +NQLT + +R L+ L+ + L N+++
Sbjct: 307 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLS 360
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 6/176 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ LT+L + L +L L L+ N L +L ++G L LQ L + QN+L L
Sbjct: 73 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P +I L L N+N++T+L +R L LQ ++ NQ+T + ++ + QNL L+
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLN 192
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SI Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 193 SIV---TQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 244
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L L L L +NRL +L ++G L LQ+L + NQL L
Sbjct: 326 LRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 385
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR----DEFQNL 175
P +I L L + N++T+ +R L LQ ++ N ++ + D FQN+
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKGFEDYFQNV 443
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 47 NNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
NN +T + + +++ L +G N L++L + L +L L L +N+L +L ++G L
Sbjct: 333 NNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQL 392
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
LQ L +++NQL P +I+ L L+ N ++S
Sbjct: 393 QNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430
>gi|116487781|gb|AAI25840.1| Si:ch211-197i12.3 protein [Danio rerio]
Length = 277
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +S++ LT L L+L +N+L+SL ++G LS L L + +N L +LP + +L L
Sbjct: 94 LPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRML 153
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ ++ L + FN+IT V +D +NL L +S++ N+I + +
Sbjct: 154 DLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAE 212
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L L L ++HNQL E L +I ++ +DL +N
Sbjct: 213 IGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHN 250
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L+ L L L+ N L SL L L KL++L + N+L +P+
Sbjct: 106 ELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPA 165
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ S L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 166 VVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDV 224
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+NQ+ + + T++ L L HN L
Sbjct: 225 AHNQLEHLPKEIGNCTQITNLDLQHNDL 252
>gi|402857609|ref|XP_003893341.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6-like [Papio anubis]
Length = 854
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 77/264 (29%), Positives = 110/264 (41%), Gaps = 45/264 (17%)
Query: 16 NLIDLEPETGSHPLTS------DD----------LKGTPALITLLLVNNNITHIHENAFP 59
NLI L PE L+S DD L PAL + L N I+HI + AF
Sbjct: 36 NLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQ 95
Query: 60 --PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
++ LH+ N + L +S GL +L L LN N L+ + TL +LQ L N
Sbjct: 96 NLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPVAIRTLGRLQELGFHNN 155
Query: 117 QLEALPSD-----------------IQLFSQLGSLYANNNRITSLDGL--------LRGL 151
++A+P IQ + Y SL+G L+G
Sbjct: 156 NIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLNGATDIQEFPDLKGT 215
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
T L++ + I ++ Q L L + L +NQI + SL KL + L HN++
Sbjct: 216 TSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEEL-PSLHRCQKLEEIGLQHNRI 274
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
E D R L L+ +DLS+N I
Sbjct: 275 WEIGADTFRQLSSLQALDLSWNAI 298
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
Query: 47 NNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNN-NRLKSLEGQL 102
NNNI I E AF P ++ +H N + + S + L L+ L LN ++
Sbjct: 154 NNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLNGATDIQEFPDLK 213
Query: 103 GTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
GT S L++L + + + LPS + Q +L L ++N+I L L R KL+ +
Sbjct: 214 GTTS-LEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELPSLHR-CQKLEEIGLQH 271
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N+I + D F+ L +L ++ L N I S++ + S L L L L+ NQLT L +
Sbjct: 272 NRIWEIGADTFRQLSSLQALDLSWNAIRSIHPEAFSTLRSLVKLDLTDNQLTTLPLAGLG 331
Query: 221 GLKRLR 226
GL L+
Sbjct: 332 GLMHLK 337
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 28/183 (15%)
Query: 60 PTIRKLHVGFNNLTSL--NNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQN 116
P R+L NL SL S GL+ L L+L++N L + + L L LQ + + N
Sbjct: 28 PCPRRLDA---NLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALN 84
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
++ +P YA N LT L V ++ N+I + F+ LH
Sbjct: 85 RISHIPD-----------YAFQN-----------LTSLVVLHLHNNRIQHLGTHSFEGLH 122
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NL+++ L N++ ++ L +L L +N + G L+T+ N I
Sbjct: 123 NLETLDLNYNELQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQ 182
Query: 237 KFG 239
G
Sbjct: 183 FVG 185
>gi|339234559|ref|XP_003378834.1| putative leucine Rich repeat-containing domain protein [Trichinella
spiralis]
gi|316978587|gb|EFV61561.1| putative leucine Rich repeat-containing domain protein [Trichinella
spiralis]
Length = 748
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 5/182 (2%)
Query: 60 PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQ 117
PT L+ FNNL ++ ++SL L L L L+ N + +LE G+LS LQ+L + +N+
Sbjct: 2 PTKLHLNASFNNLATICDHSLLALKRLQHLHLDYNNIHTLESNCFGSLSALQVLTLVKNK 61
Query: 118 LEALPSDIQL-FSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNL 175
L +P + + QL L + NR+ +D +GL K+Q+ +++ N ++ + F NL
Sbjct: 62 LRRIPKEAFVTLQQLRKLNLSRNRLRKIDWFSFKGLHKVQILHLERNALSSINDGAFGNL 121
Query: 176 HNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L + L NN++TS+ + L GL KL L LS N ++ R +RL +DLS N+
Sbjct: 122 AQLLELYLNNNKLTSVGQTWLYGLEKLEKLILSSNSVSMIESKGWRFCQRLLILDLSKNR 181
Query: 235 IN 236
++
Sbjct: 182 LS 183
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 34/247 (13%)
Query: 27 HPLTSDDLKGTPALITLLLVNNNITHIHENAFPP-------------------------- 60
H L S+ AL L LV N + I + AF
Sbjct: 39 HTLESNCFGSLSALQVLTLVKNKLRRIPKEAFVTLQQLRKLNLSRNRLRKIDWFSFKGLH 98
Query: 61 TIRKLHVGFNNLTSLNNSLRG-LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++ LH+ N L+S+N+ G L L L+LNNN+L S+ + L L KL+ L++ N +
Sbjct: 99 KVQILHLERNALSSINDGAFGNLAQLLELYLNNNKLTSVGQTWLYGLEKLEKLILSSNSV 158
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+ S F Q L L + NR+++LD + L +L+ ++ N I+ + +L
Sbjct: 159 SMIESKGWRFCQRLLILDLSKNRLSALDSNIFSYLQRLEKLDLSENAISRIDEKALSSLG 218
Query: 177 NLDSISLQNNQITSMNSS----LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL+ + L +N+++ + S GL+K+ L L++N+L + RGL +L ++L
Sbjct: 219 NLEFLDLSSNELSDVFMSGQHIFLGLSKVKVLKLNNNKLRSLPSNVFRGLDQLTRLELLN 278
Query: 233 NKINKFG 239
N I F
Sbjct: 279 NPIIIFA 285
>gi|391331045|ref|XP_003739961.1| PREDICTED: protein LAP2-like [Metaseiulus occidentalis]
Length = 544
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 41/216 (18%)
Query: 32 DDLKGTPALITLL-------LVNNNITHIHENAFPPTIR------KLHVGFNNLTSLNNS 78
+D++ PA I+ L L NNI+ I P +IR + N ++ L S
Sbjct: 71 NDVQHLPAAISSLTQLTHLDLSRNNISEI-----PESIRGCKLLSSVDASVNPISKLPES 125
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL------- 131
L L L+LN+ L+ L LG LSKL++L + +N L+ALP + +QL
Sbjct: 126 FTQLVSLEELYLNDTLLEFLPANLGRLSKLRILELRENHLKALPKSMARLTQLVRLDIGQ 185
Query: 132 ----------GSL------YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
GSL + ++NR++ L G L L +L+ + N+I+ + + F+NL
Sbjct: 186 NDFVDMPEVVGSLVSLTELWCDSNRLSYLPGFLGNLQQLRYLDASNNRISCIEDNAFKNL 245
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
NL +++ +N++T ++ LTKL L NQL
Sbjct: 246 TNLVDLTVSSNRLTRFPETIGKLTKLTTLRADDNQL 281
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 40/196 (20%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTD-------LNWLFLNN 92
L+ L + +N +T FP TI KL L + +N L GL D L L N
Sbjct: 248 LVDLTVSSNRLTR-----FPETIGKL-TKLTTLRADDNQLLGLPDSLGYCSLLEELIANG 301
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N ++ L G +G L +L LL+++ N L+ LP++I ++L L A +N++ L
Sbjct: 302 NHMEYLPGTIGLLRQLSLLMVDSNWLDELPAEIGSCNELKILSARDNKLVDLP------- 354
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
DE +L NL +S+ N++ + ++L+ L +L L+LS NQ
Sbjct: 355 -----------------DEIGHLSNLKVLSVSANRLRYLPATLTRLKQLDALWLSENQTK 397
Query: 213 EFLL---DDIRGLKRL 225
+L +D G +RL
Sbjct: 398 PLILLQSEDATGQRRL 413
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
LQ +D NQ+ + R F H L ++ Q+N + + +++S LT+L +L LS N ++E
Sbjct: 40 LQELCLDANQLGELPRQLFY-CHALRRLTFQDNDVQHLPAAISSLTQLTHLDLSRNNISE 98
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
+ + IRG K L +VD S N I+K
Sbjct: 99 -IPESIRGCKLLSSVDASVNPISKL 122
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L L+ N+L L QL L+ L + N ++ LP+ I +QL L + N I+ +
Sbjct: 40 LQELCLDANQLGELPRQLFYCHALRRLTFQDNDVQHLPAAISSLTQLTHLDLSRNNISEI 99
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+RG L + N I+ + + F L +L+ + L + + + ++L L+KL L
Sbjct: 100 PESIRGCKLLSSVDASVNPISKL-PESFTQLVSLEELYLNDTLLEFLPANLGRLSKLRIL 158
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L N L + L + L +L +D+ N
Sbjct: 159 ELRENHL-KALPKSMARLTQLVRLDIGQN 186
>gi|348578841|ref|XP_003475190.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat protein
SHOC-2-like [Cavia porcellus]
Length = 584
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGDLCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E +L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGDLCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N +
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENXFDH 462
Query: 121 LPSDIQLFS--QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P++I Q L NN++T+L + LT L + N +T + +E L NL
Sbjct: 463 CPNEIAYLKDLQXNKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENL 521
Query: 179 DSISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ + L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 EELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 565
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L+ L + +N+L SL GT + + L + NQL +P D+ L L +NN + L
Sbjct: 381 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL--DSISLQNNQITSMNSSLSGLTKLA 202
L L KL+ +++ N +E L +L + + L NNQ+T++ + LT L
Sbjct: 441 PHGLGNLRKLRELDLEENXFDHC-PNEIAYLKDLQXNKLVLTNNQLTTLPRGIGHLTNLT 499
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+L L N LT L ++I L+ L + L+ N
Sbjct: 500 HLGLGENLLT-HLPEEIGTLENLEELYLNDN 529
>gi|449105114|ref|ZP_21741822.1| hypothetical protein HMPREF9729_00087, partial [Treponema denticola
ASLM]
gi|448967350|gb|EMB47988.1| hypothetical protein HMPREF9729_00087, partial [Treponema denticola
ASLM]
Length = 419
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 27 HPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLN 86
+ LT +++G AL L +N +T ++ ++KL+ G N LT LN ++GLT L
Sbjct: 179 NQLTELNVQGLTALQELYCNSNQLTELNVQGLTA-LKKLYCGTNQLTELN--VQGLTALK 235
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L+ + N+L L Q L+ L+ L NQL AL ++Q + L L N++T L+
Sbjct: 236 ELYCSENQLTELNVQ--GLTVLERLFCWGNQLTAL--NVQGLTALKELDCGGNQLTELN- 290
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
++GL LQ N + NQ+T + Q L L + NQ+T++N + GLT L L
Sbjct: 291 -VQGLNNLQKLNCNSNQLTELN---VQGLTALKELDCSENQLTALN--VQGLTALQELSC 344
Query: 207 SHNQLTEFLLDDIRGLKRLRTVD 229
S NQLTE + + L+ L D
Sbjct: 345 SENQLTELNVQGLTALQGLSCAD 367
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 14/202 (6%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
G++ LT +++G AL L N +T ++ + +L N LT+LN ++GLT
Sbjct: 218 CGTNQLTELNVQGLTALKELYCSENQLTELNVQGLT-VLERLFCWGNQLTALN--VQGLT 274
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L L N+L L Q L+ LQ L NQL L ++Q + L L + N++T+
Sbjct: 275 ALKELDCGGNQLTELNVQ--GLNNLQKLNCNSNQLTEL--NVQGLTALKELDCSENQLTA 330
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L+ ++GLT LQ + NQ+T + Q L L +S +N +T++N + GLT L +
Sbjct: 331 LN--VQGLTALQELSCSENQLTELN---VQGLTALQGLSCADNNLTALN--VQGLTALKW 383
Query: 204 LYLSHNQLTEFLLDDIRGLKRL 225
LY NQLTE + + LK+L
Sbjct: 384 LYCGGNQLTELNVQGLTALKKL 405
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 23/235 (9%)
Query: 9 DGHAVALNLIDLEPETGSHPLTSDDLKGTPALIT-----LLLVNNNITHIHENAFPPTIR 63
DG AVA+ E E S T KGT ++ L N +T ++ ++
Sbjct: 73 DGSAVAVEGCT-ETELTSGAQTVLRAKGTVVILKGKITELYCSENQLTELNVQGLTA-LK 130
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
L N LT+LN ++GLT L L N+L +L Q L+ L+ L +NQL L
Sbjct: 131 TLSCWGNQLTALN--VQGLTALKTLSCWGNQLTALNVQ--GLTALEWLSCSKNQLTEL-- 184
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
++Q + L LY N+N++T L+ ++GLT L+ NQ+T + Q L L +
Sbjct: 185 NVQGLTALQELYCNSNQLTELN--VQGLTALKKLYCGTNQLTELN---VQGLTALKELYC 239
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQ+T +N + GLT L L+ NQLT +++GL L+ +D N++ +
Sbjct: 240 SENQLTELN--VQGLTVLERLFCWGNQLTAL---NVQGLTALKELDCGGNQLTEL 289
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 27 HPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLN 86
+ LT +++G L L N +T ++ +++L G N LT LN ++GL +L
Sbjct: 242 NQLTELNVQGLTVLERLFCWGNQLTALNVQGLTA-LKELDCGGNQLTELN--VQGLNNLQ 298
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L N+N+L L Q L+ L+ L +NQL AL ++Q + L L + N++T L+
Sbjct: 299 KLNCNSNQLTELNVQ--GLTALKELDCSENQLTAL--NVQGLTALQELSCSENQLTELN- 353
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
++GLT LQ + N +T + Q L L + NQ+T +N + GLT L LY
Sbjct: 354 -VQGLTALQGLSCADNNLTALN---VQGLTALKWLYCGGNQLTELN--VQGLTALKKLYC 407
Query: 207 SHNQLTEF 214
NQLTE
Sbjct: 408 GRNQLTEL 415
>gi|354497491|ref|XP_003510853.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
gi|344249840|gb|EGW05944.1| Leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
Length = 582
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + ++ +L S++ LT L L+L +N+L+SL +LG L L L + +N L +LP
Sbjct: 104 RLDLSKRSIHALPPSVKELTQLTELYLYSNKLQSLPAELGCLLNLMTLALSENSLTSLPD 163
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S+
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPPVVYRLDSLTTLYLRFNRITAVEKD-IKNLPKLSMLSI 222
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 223 RENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 10/192 (5%)
Query: 53 IHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
IH A PP++++L ++ N L SL L L +L L L+ N L SL L L
Sbjct: 112 IH--ALPPSVKELTQLTELYLYSNKLQSLPAELGCLLNLMTLALSENSLTSLPDSLDNLK 169
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
KL++L + N+L +P + L +LY NRIT+++ ++ L KL + ++ N+I
Sbjct: 170 KLRMLDLRHNKLREIPPVVYRLDSLTTLYLRFNRITAVEKDIKNLPKLSMLSIRENKIKQ 229
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
+ E L NL ++ + +NQ+ + + T++ L L HN+L + L D I L L
Sbjct: 230 LPA-EIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLN 287
Query: 227 TVDLSYNKINKF 238
+ L YN+++
Sbjct: 288 RLGLRYNRLSAI 299
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP + +L ++ FN +T++ ++ L L+ L + N++K L ++G L L L
Sbjct: 184 IPPVVYRLDSLTTLYLRFNRITAVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITL 243
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQLE LP +I +Q+ +L +N + L + L+ L + +N+++ + R
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRS- 302
Query: 172 FQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
L+ ++L+NN I+++ S LS L KL L L+ N + + + ++++
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 231 SYNKINK--FGTRNEGK 245
+N+INK FG + K
Sbjct: 363 EHNRINKIPFGIFSRAK 379
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ LN L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLN 86
D+K P L L + N I + P I +L V N L L + T +
Sbjct: 210 DIKNLPKLSMLSIRENKIKQL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G LS L L + N+L A+P + S L L NN I++L +
Sbjct: 265 NLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPE 324
Query: 146 GLLRGLTKL----------QVF--------------NMDFNQITMVRRDEFQNLHNLDSI 181
LL L KL Q++ NM+ N+I + F L +
Sbjct: 325 SLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKL 384
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL L + LS N + K
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
Length = 1183
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L +G N + + L L L L LN+ +K + L L LQ L + NQ++ +
Sbjct: 165 LQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEI 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + S L L N NRI + L L LQ +++ NQI+ + D F L NL +
Sbjct: 225 PDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEI-PDSFATLKNLQKL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +NQI + S L L L L NQ+ + + D L L+ ++LS+NKI +
Sbjct: 284 DLGSNQIKKIPDSFGKLASLQQLNLGSNQIKK-IPDSFGKLASLQQLNLSHNKIEEI 339
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ N + + +S L +L L+L NN +K + L TL LQ L NQ++
Sbjct: 325 SLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKE 384
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P + L L ++N+I + L LT LQ + QIT + D L NL
Sbjct: 385 IPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITEI-PDFLSTLVNLQQ 443
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--LLDDIRGLKRLRTVDLSYNKI 235
++L NQI + S L L LYL NQ+T+ L+++ L++L DL N I
Sbjct: 444 LNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKL---DLRLNPI 497
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++LH+ + + +SL L +L L+L NN++K + L LS LQ L + N+++
Sbjct: 187 SLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKK 246
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P + + L L N N+I+ + L LQ ++ NQI + D F L +L
Sbjct: 247 IPDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKI-PDSFGKLASLQQ 305
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
++L +NQI + S L L L LSHN++ E
Sbjct: 306 LNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEI 339
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE---GQL--------------- 102
++++L + N ++ + +S L +L L L +N++K + G+L
Sbjct: 256 SLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKK 315
Query: 103 -----GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
G L+ LQ L + N++E +P L LY NN I + L L LQ
Sbjct: 316 IPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQL 375
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
NQI + D L NL + + +NQI + SL+ LT L L LS Q+TE + D
Sbjct: 376 GFSSNQIKEI-PDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITE-IPD 433
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+ L L+ ++LS+N+I K
Sbjct: 434 FLSTLVNLQQLNLSFNQIKKI 454
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 95 LKSLEGQLGTLSKLQLLVI-------EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L +L +G L+KL+ L++ ++N L+ LP + +L L N + ++ +
Sbjct: 28 LDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKLKRLEWPCNNLEAIPVI 87
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ-NNQITSMNSSLSGLTKLAYLYL 206
+ KL+ N+ FNQI + + L NL + L N+QI + SLS L L L L
Sbjct: 88 ITKFPKLKQLNLSFNQIKEIP-ESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDL 146
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
S N + + D + L L+ + L N I +
Sbjct: 147 SANHQIKEIPDSLAALVNLQQLQLGGNPIKEI 178
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 71 NLTSLNNSLRGLTDLNWLFL-------NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
NL +L ++ L L L L N LK+L + L KL+ L N LEA+P
Sbjct: 27 NLDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKLKRLEWPCNNLEAIPV 86
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I F +L L + N+I + L L LQ ++ N D L NL + L
Sbjct: 87 IITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDL 146
Query: 184 Q-NNQITSMNSSLSGLTKLAYLYLSHNQLTE--FLLDDIRGLKRLRTVDLSYNKI 235
N+QI + SL+ L L L L N + E ++L + L++L D +I
Sbjct: 147 SANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEI 201
>gi|350420805|ref|XP_003492631.1| PREDICTED: slit homolog 3 protein-like [Bombus impatiens]
Length = 1257
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+L L L NNNI + E++ PP I L + N L S +SL+ L L WL+L N KSL
Sbjct: 199 SLAWLNLDNNNIEELLEDSLPPNIHTLSLNSNLLKSFPSSLKSLRHLTWLYLRGNDFKSL 258
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNNRITSLD-GLLRGLTKL 154
E S L+L+ + +N +E + + + L + ++ ++N++TSL G+ GL
Sbjct: 259 ELPDFQSSNLELVDVSENCIEWIGT-LSLTNRTLKIKDFNLDSNKLTSLTAGIFDGLETK 317
Query: 155 QVFNMDFNQITMVRRDEFQNLHN-LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++ ++ N I V D F+ L + L+ ++L+NN ++S+ +++S L KL+YLYL++N +
Sbjct: 318 RI-HLSSNTIKNVDDDAFRGLEDMLEYLNLENNDLSSVPAAVSRLKKLSYLYLANNDI 374
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLT------------- 73
L SD + P L+TL L N IT + +NAF P++R LH+ FN L
Sbjct: 598 LNSDSIMDCPELVTLSLAYNRITKMEKNAFYGLPSLRFLHLEFNKLVMLDLDAIAEIGGP 657
Query: 74 --SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS-----------KLQLLVIEQNQLEA 120
+LN S ++ +N NN L L+ +S +L+ L ++ N +
Sbjct: 658 DFALNVSYNAISTINSGSFTNN-LTRLDLSFNNISHLPADTFYGTPELKSLDLQSNFIVV 716
Query: 121 LPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
L S L +L NN+I SL GL LQ ++ NQIT + ++F+NL NL
Sbjct: 717 LESGTFTLRHLETLNLRNNKIESLRKQSFHGLELLQQLDLSGNQITQLSTEQFRNLKNLR 776
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
++L N+I S+ + TKL L LS N+ T
Sbjct: 777 ILNLSGNKIRSLLRDVFEGTKLEILDLSKNKFT 809
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT-----IRKLHVGFNNLTSLNNSLRGLT 83
L + KG L L L N++T + ++ F I +L F +LR L+
Sbjct: 450 LKDETFKGARKLKELSLSFNHLTELDDDCFVGIEESLDILELSFAFATDVFPQRALRPLS 509
Query: 84 DLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNN 139
+L WL L+NN +++E + +L+ + +E N+L LP I L S +L + N
Sbjct: 510 NLLWLVLDNNNFQTIEATAFYSFQRLRYINLESNRLHYLPERIFLSSVHPELRDVKLGYN 569
Query: 140 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSG 197
+ ++ D LT+L+ ++ N+I ++ D + L ++SL N+IT M + G
Sbjct: 570 FLEAIPDFSFHNLTELRSLDLTGNRIKILNSDSIMDCPELVTLSLAYNRITKMEKNAFYG 629
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLR-TVDLSYNKIN 236
L L +L+L N+L LD I + +++SYN I+
Sbjct: 630 LPSLRFLHLEFNKLVMLDLDAIAEIGGPDFALNVSYNAIS 669
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 1 MSRFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAF-- 58
+RF + L+++ +G L +D L + + L L++N +++I + +F
Sbjct: 69 FARFPDVSVSYVAQLDVVG----SGIQALDNDALTSSVGVEALGLMSNRLSNIGDKSFSG 124
Query: 59 -PPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
++R L + +N L + R L LNWL +++N L SL+G G SK
Sbjct: 125 IADSLRSLDLSYNALEDVPFKVFRDLKKLNWLNMHSNHLTSLDGDWGH-SK--------- 174
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L + + +N I + + L N+D N I + D
Sbjct: 175 ------------DALTNAFFGDNSIIEIPKIFNTFESLAWLNLDNNNIEELLEDSLP--P 220
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
N+ ++SL +N + S SSL L L +LYL N L D + L VD+S N I
Sbjct: 221 NIHTLSLNSNLLKSFPSSLKSLRHLTWLYLRGNDFKSLELPDFQS-SNLELVDVSENCIE 279
Query: 237 KFGT 240
GT
Sbjct: 280 WIGT 283
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 63 RKLHVGFNNLTSLNN-SLRGLTD-LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++H+ N + ++++ + RGL D L +L L NN L S+ + L KL L + N +
Sbjct: 317 KRIHLSSNTIKNVDDDAFRGLEDMLEYLNLENNDLSSVPAAVSRLKKLSYLYLANNDIRN 376
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVF---NMDFNQITMVRRDEFQNLH 176
+ D + +L A + SLD + + +T+ Q N+ +N+I+ ++ +F+
Sbjct: 377 ISGD-AFYEFAENLRALSLATNSLDAVPVAAVTRCQRLLHLNLGYNKISHIQPGDFEWAE 435
Query: 177 NLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR-LRTVDLSY 232
+L+ + L+NN +T + + + G KL L LS N LTE D G++ L ++LS+
Sbjct: 436 DLEILLLRNNILTKLKDETFKGARKLKELSLSFNHLTELDDDCFVGIEESLDILELSF 493
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 33/212 (15%)
Query: 60 PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEG-------QLGTLSKL--Q 109
P +R + +G+N L ++ + S LT+L L L NR+K L +L TLS +
Sbjct: 559 PELRDVKLGYNFLEAIPDFSFHNLTELRSLDLTGNRIKILNSDSIMDCPELVTLSLAYNR 618
Query: 110 LLVIEQNQLEALPS--------------DIQLFSQLG----SLYANNNRITSLDG--LLR 149
+ +E+N LPS D+ +++G +L + N I++++
Sbjct: 619 ITKMEKNAFYGLPSLRFLHLEFNKLVMLDLDAIAEIGGPDFALNVSYNAISTINSGSFTN 678
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
LT+L ++ FN I+ + D F L S+ LQ+N I + S L L L L +N
Sbjct: 679 NLTRL---DLSFNNISHLPADTFYGTPELKSLDLQSNFIVVLESGTFTLRHLETLNLRNN 735
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
++ GL+ L+ +DLS N+I + T
Sbjct: 736 KIESLRKQSFHGLELLQQLDLSGNQITQLSTE 767
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLK 96
L TL L NN I + + +F +++L + N +T L+ R L +L L L+ N+++
Sbjct: 727 LETLNLRNNKIESLRKQSFHGLELLQQLDLSGNQITQLSTEQFRNLKNLRILNLSGNKIR 786
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
SL + +KL++L + +N+ +PS +++ L L +N + LD ++L
Sbjct: 787 SLLRDVFEGTKLEILDLSKNKFTVVPSPSFLEVGYTLRDLNLADNFVDHLDSTAFPTSQL 846
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTE 213
N+ N++T++ + F +L L S+++ N + + L L LYL++ L +
Sbjct: 847 VSLNLAHNRLTILPDNSFVSLGKLLSLNVSQNILQANFKELFHYLPGLRQLYLANCGLRD 906
Query: 214 FLLDDIRGLKRLRTVDLSYNKIN 236
L L L +DLS+N I+
Sbjct: 907 IPL---LPLTNLNVLDLSFNHIH 926
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLG 103
L +N + H+ AFP + L SLN L +NRL L +
Sbjct: 828 LADNFVDHLDSTAFPTS---------QLVSLN-------------LAHNRLTILPDNSFV 865
Query: 104 TLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
+L KL L + QN L+A L LY N + D L LT L V ++ FN
Sbjct: 866 SLGKLLSLNVSQNILQANFKELFHYLPGLRQLYLANCGLR--DIPLLPLTNLNVLDLSFN 923
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
I +FQ L +L + L N+ +TSM N LS L +L +S N + E + G
Sbjct: 924 HIHSTSDKQFQYLKDLKILWLVNDSLTSMPNVKLSLLRELD---VSGNPIEELTKESFLG 980
Query: 222 LKRLRTVDL 230
RL ++L
Sbjct: 981 YPRLEKLNL 989
>gi|348522608|ref|XP_003448816.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Oreochromis niloticus]
Length = 597
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHENA-FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L LLL +N IT + ++ P + L + N L+SL ++L L +L L L++N+L SL
Sbjct: 81 LTKLLLSSNQITLLSDDIRLLPGLTTLDLHDNQLSSLPSALGELQNLQQLRLSHNQLHSL 140
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ TL L+ L ++QN LE LP D+ L L ++N++ SL L LQ N
Sbjct: 141 PVEMCTLENLRSLTLQQNLLENLPEDLGQLVNLTELDVSSNQLKSLPSSFGCLVSLQKVN 200
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ NQ++ + D L N+ + +NQ+T + +SLS + L LYL HN+L
Sbjct: 201 LCHNQLSGL-PDSLARLTNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHNKL 252
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L L++N++ L + L L L + NQL +LPS + L L ++N++
Sbjct: 79 TDLTKLLLSSNQITLLSDDIRLLPGLTTLDLHDNQLSSLPSALGELQNLQQLRLSHNQLH 138
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
SL + L L+ + N + + D Q L NL + + +NQ+ S+ SS L L
Sbjct: 139 SLPVEMCTLENLRSLTLQQNLLENLPEDLGQ-LVNLTELDVSSNQLKSLPSSFGCLVSLQ 197
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L HNQL+ L D + L ++ +D S N++ +
Sbjct: 198 KVNLCHNQLS-GLPDSLARLTNVKLLDCSDNQLTEI 232
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L +L L L +L L +++N+LKSL G L LQ + + NQL L
Sbjct: 150 LRSLTLQQNLLENLPEDLGQLVNLTELDVSSNQLKSLPSSFGCLVSLQKVNLCHNQLSGL 209
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + + + L ++N++T + L + L+ + N++ ++ + L L
Sbjct: 210 PDSLARLTNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHNKLRLLPKLPAPALKEL--- 266
Query: 182 SLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ NNQI + + LS L+ ++ L L +N++ + + ++I L L +DL+ N I
Sbjct: 267 YVGNNQIEQLQTEQLSCLSAISLLELRNNKI-KIVPEEITLLSTLTRLDLTNNDITSL 323
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++K+++ N L+ L +SL LT++ L ++N+L + L + L+ L + N+L
Sbjct: 195 SLQKVNLCHNQLSGLPDSLARLTNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHNKLRL 254
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP L LY NN+I L L L+ + + + N+I +V +E L L
Sbjct: 255 LPK--LPAPALKELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVP-EEITLLSTLT 311
Query: 180 SISLQNNQITSMNSS 194
+ L NN ITS+ +S
Sbjct: 312 RLDLTNNDITSLPAS 326
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 61 TIRKLHVGFNNLTSLNNSL----RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
+I ++ N LTS+ L L+++N F NRL S + L +L + + N
Sbjct: 421 SIATVNFSKNQLTSVPPRLLEFQSSLSEINLGF---NRLISCSPDICKLLQLTHIDLRNN 477
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
QL LPS++Q ++L S+ NR S +L L+ + NQ+ V L
Sbjct: 478 QLSDLPSEMQNLTKLRSIILIYNRFKSFPDVLYETLSLETILLANNQVCEVDPSRLMKLT 537
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+L ++ L NN + ++ L T L L L N
Sbjct: 538 HLSTLDLANNDLLNIPPELGLCTTLRCLSLEGN 570
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 85 LNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L L++ NN+++ L+ QL LS + LL + N+++ +P +I L S L L NN ITS
Sbjct: 263 LKELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVPEEITLLSTLTRLDLTNNDITS 322
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRD 170
L L L L V ++ N + +RRD
Sbjct: 323 LPASLSLLPNLNVLLLEGNPLRGIRRD 349
>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 452
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 23/189 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +T+L + L +L WL L+ N+L L ++G L LQ L + QNQL LP +I
Sbjct: 242 NRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 301
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
L L + N++T+L + L L+V ++D NQ+T + ++
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL ++L +NQ+T++ + L L L L NQLT F +IR LK L+
Sbjct: 362 LPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQE 420
Query: 228 VDLSYNKIN 236
+ L N ++
Sbjct: 421 LHLYLNPLS 429
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + FN+LT L + L +L L L+ N L +L ++G L LQ L + QN+L L
Sbjct: 73 LQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++T+L +R L LQ ++ NQ+T + + E L NL ++
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK-EIGQLQNLKTL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 192 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 244
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQ---- 115
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L++ Q
Sbjct: 142 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 201
Query: 116 -----------------NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
NQL LP +I L L NRIT+L + L LQ +
Sbjct: 202 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 261
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T++ + E L NL + L NQ+T++ + L L L L NQLT L +
Sbjct: 262 LHQNQLTILPK-EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKE 319
Query: 219 IRGLKRLRTVDLSYNKI 235
I L+ LR +DL N++
Sbjct: 320 IEQLQNLRVLDLDNNQL 336
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 188 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T L + L LQ ++ NQ+T + + E L NL +
Sbjct: 248 PKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPK-EIGQLQNLQEL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+T++ + L L L L +NQLT + +R L+ L+ + L N+++
Sbjct: 307 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLS 360
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L L L L +NRL +L ++G L LQ+L + NQL L
Sbjct: 326 LRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTL 385
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L + N++T+ +R L LQ ++ N ++ + + L
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIRRL 439
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L +G N L++L + L +L L L +N+L +L ++G L LQ L +++NQL
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTT 407
Query: 121 LPSDIQLFSQLGSLYANNNRITS 143
P +I+ L L+ N ++S
Sbjct: 408 FPKEIRQLKNLQELHLYLNPLSS 430
>gi|408490495|ref|YP_006866864.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
ATCC 700755]
gi|408467770|gb|AFU68114.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
ATCC 700755]
Length = 495
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 45 LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
LV+NN+T + E+ T + +L++G NNLT+L S+ L+ L F +N+L L +G
Sbjct: 261 LVSNNLTTLPESIGNLTSLEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIG 320
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L+ L+ L + + L LP I L LY N + +T+L + LT L+ N+D N+
Sbjct: 321 NLTSLEELFLRETDLTTLPESIGNLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNR 380
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+T + + NL LD + LQ N++T++ S+ LT L L++N LT L + I L
Sbjct: 381 LTTL-PESIGNLTRLDLLDLQGNKLTTLPESIGNLTSLDEFILNNNALT-VLPESIGNLI 438
Query: 224 RLRTVDL 230
+L + L
Sbjct: 439 KLSALYL 445
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ +NLT+L S+ LT L L L+ NRL +L +G L++L LL ++ N+L
Sbjct: 347 SLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLDLQGNKLTT 406
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP I + L NNN +T L + L KL + N +T + + +L N +
Sbjct: 407 LPESIGNLTSLDEFILNNNALTVLPESIGNLIKLSALYLFGNDLTTL-PESIGSLKNNLT 465
Query: 181 ISLQNNQITSMNSSLSGLTK 200
I + +Q T S+ + K
Sbjct: 466 IYMLKSQYTRCEKSIKLIKK 485
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L+ L L L+ +L +G L+ L+ L + N L LP I + L LY N
Sbjct: 229 SLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPESIGNLTSLEELYLGKNN 288
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+T+L + L++L+ F N+++ V + NL +L+ + L+ +T++ S+ L
Sbjct: 289 LTTLPESIGNLSRLKTFFSGSNKLS-VLPESIGNLTSLEELFLRETDLTTLPESIGNLIS 347
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LYL+ + LT L I L L ++L N++
Sbjct: 348 LERLYLNESNLTA-LPQSIGNLTSLEKLNLDGNRL 381
>gi|307178161|gb|EFN66969.1| Leucine-rich repeat protein SHOC-2 [Camponotus floridanus]
Length = 624
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++L + ++T+L +S+R LT L ++ N+L +L ++G L+ L+ L + +N L +
Sbjct: 144 CVKRLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPEIGCLANLETLALSENSLTS 203
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ ++ L L +N++ + ++ LT L + FN++ V D + L NL
Sbjct: 204 LPNTLENLKSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVKYV-NDNIRYLTNLTM 262
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL+ N+I + + + L L +SHN L E L ++I +L T+DL +N++
Sbjct: 263 LSLRENKIKELPAGVGELVNLITFDVSHNHL-EHLPEEIGNCVQLSTLDLQHNEL 316
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
+ LT LN + N+L +L +GT + L + NQL +P DIQ L L +NN
Sbjct: 422 KNLTKLN---MKENQLTALPLDIGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNN 478
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
+ + + L KL+V +++ N+I + +E L L + LQ+NQ+ S+ ++ LT
Sbjct: 479 LLKRIPATIANLRKLRVLDLEENRIDSL-PNEIGFLRELQKLILQSNQVVSLPRAIGHLT 537
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
L YL + N L +L ++I L+ L ++
Sbjct: 538 NLTYLSVGENNLN-YLPEEIGTLENLESL 565
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N L + + ++ L L L L+NN LK + + L KL++L +E+N++++LP+
Sbjct: 449 ELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPATIANLRKLRVLDLEENRIDSLPN 508
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I +L L +N++ SL + LT L ++ N + + +E L NL+S+ +
Sbjct: 509 EIGFLRELQKLILQSNQVVSLPRAIGHLTNLTYLSVGENNLNYL-PEEIGTLENLESLYI 567
Query: 184 QNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+N + ++ L+ T L+ + + + L++ + + G
Sbjct: 568 NDNANLHNLPFELALCTNLSIMSIENCPLSQIPAEIVAG 606
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 49 NITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++ H N P + KL + FN + +N+++R LT+L L L N++K L +
Sbjct: 218 DLRHNKLNEIPDVVYKLTSLTTLFLRFNRVKYVNDNIRYLTNLTMLSLRENKIKELPAGV 277
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L L + N LE LP +I QL +L +N + + + L L + +N
Sbjct: 278 GELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLVSLTRLGLRYN 337
Query: 163 QITMVRR--------DEFQ---------------NLHNLDSISLQNNQITSMNS-SLSGL 198
+++ + + DEF +L +L +I+L N T+ S S
Sbjct: 338 RLSNIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLSDLTTITLSRNNFTAYPSGGPSQF 397
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
T + + L HN++ + K L +++ N++
Sbjct: 398 TNVYSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQL 434
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 15 LNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTI---RKLHV---G 68
+N+++L T DD++ +L L+L NN + I P TI RKL V
Sbjct: 445 VNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRI-----PATIANLRKLRVLDLE 499
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
N + SL N + L +L L L +N++ SL +G L+ L L + +N L LP +I
Sbjct: 500 ENRIDSLPNEIGFLRELQKLILQSNQVVSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTL 559
Query: 129 SQLGSLYANNN 139
L SLY N+N
Sbjct: 560 ENLESLYINDN 570
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 38/245 (15%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLR 80
L + +K PA + L L+ +++H H P I L + N L + +++
Sbjct: 265 LRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIG 324
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----YA 136
L L L L NRL ++ L + +E NQ+ LP L S L L +
Sbjct: 325 NLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGNQVSHLPDG--LLSSLSDLTTITLS 382
Query: 137 NNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 196
NN G T + N++ N+I + F NL ++++ NQ+T++ +
Sbjct: 383 RNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQLTALPLDIG 442
Query: 197 GLTKLAYLYLSHNQLTEFLLDDIRGLK-----------------------RLRTVDLSYN 233
+ L L NQL + + DDI+ LK +LR +DL N
Sbjct: 443 TWVNMVELNLGTNQLMK-IPDDIQYLKSLEILILSNNLLKRIPATIANLRKLRVLDLEEN 501
Query: 234 KINKF 238
+I+
Sbjct: 502 RIDSL 506
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL++ N LT+L + ++ L L N+L + + L L++L++ N L+ +P+
Sbjct: 426 KLNMKENQLTALPLDIGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPA 485
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I +L L NRI SL + L +LQ + NQ+ + R +L NL +S+
Sbjct: 486 TIANLRKLRVLDLEENRIDSLPNEIGFLRELQKLILQSNQVVSLPR-AIGHLTNLTYLSV 544
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHN 209
N + + + L L LY++ N
Sbjct: 545 GENNLNYLPEEIGTLENLESLYINDN 570
>gi|126659720|ref|ZP_01730848.1| hypothetical protein CY0110_23181 [Cyanothece sp. CCY0110]
gi|126618968|gb|EAZ89709.1| hypothetical protein CY0110_23181 [Cyanothece sp. CCY0110]
Length = 974
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + +N ++ + + L L L+L+NN++ + ++ L L++L + NQ+ +P
Sbjct: 20 KLDLSYNQISEIPPEIAQLHSLRILYLHNNQISEIPPEIAQLHSLEILDLHNNQISNIPP 79
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L LY NN+I+S+ + L L+ + NQI+ + E LH+L + L
Sbjct: 80 EIAQLHSLEQLYLYNNQISSIPPEIAQLHSLEQLYLYNNQISNI-PPEIAQLHSLQELYL 138
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NNQI+++ ++ L L LYLS+NQ++ + +I L L + LS N +N
Sbjct: 139 SNNQISNIPPEIAQLHSLEQLYLSNNQISN-IPPEITQLHSLEQLYLSNNPLN 190
>gi|418678095|ref|ZP_13239369.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418684289|ref|ZP_13245475.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741009|ref|ZP_13297385.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|400321285|gb|EJO69145.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410741181|gb|EKQ85893.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751604|gb|EKR08581.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 354
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N L ++ + L L L L+ NRL ++ ++G L LQ+L ++ NQ+ +
Sbjct: 111 SLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVS 170
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I+ +L L NNR ++ G L LQ N+ NQ+ + ++ Q L NL
Sbjct: 171 LPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQ-LQNLRD 229
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQIT + + + L L LYLS NQ T L +I LK LR + L N++
Sbjct: 230 LVLDRNQITILPTEVLQLQNLQELYLSENQFTS-LPKEIDKLKNLRWLSLKNNRL 283
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 56 NAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
NA P I +L + N + SL + GL +L L L NNR K++ G+ L LQ
Sbjct: 146 NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQ 205
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + +NQL ++P +I L L + N+IT L + L LQ + NQ T + +
Sbjct: 206 KLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPK 265
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
E L NL +SL+NN++T++ + L L L L +NQLT L +I LK L+ ++
Sbjct: 266 -EIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTN-LPKEIGQLKNLQRLE 323
Query: 230 LSYN 233
L N
Sbjct: 324 LDSN 327
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + F NLTS + +L L L+ N L L ++ L LQ L + N+L L
Sbjct: 43 VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +L N++ ++ + L L+ N+ N++ V + E L NL +
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPK-EIGQLKNLQIL 161
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQI S+ + GL +L L L +N+ + ++ LK L+ ++LS N++
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQ-LKNLQKLNLSENQL 214
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N +T L + L +L L+L+ N+ SL ++ L L+ L ++ N+L L
Sbjct: 227 LRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTL 286
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
P +I L L NN++T+L + L LQ +D N + +++
Sbjct: 287 PKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPFSPKEKEKV 337
>gi|74192262|dbj|BAE34322.1| unnamed protein product [Mus musculus]
Length = 309
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 6/207 (2%)
Query: 37 TPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
TP + L LV+N I I+ AF + L + N ++ + S L +L L+NNR
Sbjct: 16 TPNITLLSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRMSLKYLNLSNNR 75
Query: 95 LKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGL 151
+ +LE G LS L+V + +N++ +P + L L NRI ++GL +GL
Sbjct: 76 ISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQGL 135
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQ 210
L+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N
Sbjct: 136 DSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNA 195
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ + D +RL +DLSYN++ +
Sbjct: 196 IEKISPDAWEFCQRLSELDLSYNQLTR 222
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 8/155 (5%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 137 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAI 196
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 197 EKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 256
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLS 207
NL ++ L+NN I+ + + SGL L LY+S
Sbjct: 257 NLQTLDLRNNDISWAIEDASEAFSGLKSLTKLYVS 291
>gi|55733633|emb|CAH93493.1| hypothetical protein [Pongo abelii]
Length = 582
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N T + + GL L L L+NN LK L LG L +L+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQPTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQPTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L+ LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRELRELDLEENKL 460
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQ T+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQPTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L+ L + +N+L SL GT + + L + NQ +P D+ L L +NN + L
Sbjct: 381 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQPTKIPEDVSGLVSLEVLILSNNLLKKL 440
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
L L +L+ +++ N++ + +E L +L + L NNQ+T++ + LT L +L
Sbjct: 441 PHGLGNLRELRELDLEENKLESL-PNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHL 499
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L N LT L ++I L+ L + L+ N
Sbjct: 500 GLGENLLT-HLPEEIGTLENLEELYLNDN 527
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|421088197|ref|ZP_15549025.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410003182|gb|EKO53628.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 354
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N L ++ + L L L L+ NRL ++ ++G L LQ+L ++ NQ+ +
Sbjct: 111 SLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVS 170
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I+ +L L NNR ++ G L LQ N+ NQ+ + ++ Q L NL
Sbjct: 171 LPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQ-LQNLRD 229
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +NQIT + + + L L LYLS NQ T L +I LK LR + L N++
Sbjct: 230 LVLDHNQITILPTEVLQLQNLQELYLSENQFTS-LPKEIDKLKNLRWLSLKNNRL 283
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 56 NAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
NA P I +L + N + SL + GL +L L L NNR K++ G+ L LQ
Sbjct: 146 NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQ 205
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + +NQL ++P +I L L ++N+IT L + L LQ + NQ T + +
Sbjct: 206 KLNLSENQLVSIPKEILQLQNLRDLVLDHNQITILPTEVLQLQNLQELYLSENQFTSLPK 265
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
E L NL +SL+NN+++++ + L L L L +NQLT L +I LK L+ ++
Sbjct: 266 -EIDKLKNLRWLSLKNNRLSTLPKEIGQLKNLQRLELGNNQLTN-LPKEIGQLKNLQRLE 323
Query: 230 LSYNKI 235
L N +
Sbjct: 324 LDSNPL 329
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + F NLTS + +L L L+ N L L ++ L LQ L + N+L L
Sbjct: 43 VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +L N++ ++ + L L+ N+ N++ V + E L NL +
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPK-EIGQLKNLQIL 161
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQI S+ + GL +L L L +N+ + ++ LK L+ ++LS N++
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQ-LKNLQKLNLSENQL 214
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N TSL + L +L WL L NNRL +L ++G L LQ L + NQL L
Sbjct: 250 LQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLSTLPKEIGQLKNLQRLELGNNQLTNL 309
Query: 122 PSDIQLFSQLGSLYANNNRITS 143
P +I L L ++N ++S
Sbjct: 310 PKEIGQLKNLQRLELDSNPLSS 331
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N +T L + L +L L+L+ N+ SL ++ L L+ L ++ N+L L
Sbjct: 227 LRDLVLDHNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLSTL 286
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
P +I L L NN++T+L + L LQ +D N ++ +++
Sbjct: 287 PKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLSSKEKEKV 337
>gi|418693182|ref|ZP_13254245.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|418723760|ref|ZP_13282594.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|400356840|gb|EJP12998.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|409962558|gb|EKO26292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 315
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 46 VNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
V +N+T +N P +R+L + LT+L + L +L L L +NRL +L ++ L
Sbjct: 41 VYHNLTEALQN--PKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQL 98
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
LQ L + NQ LP +I L L N+NR+T+L + KLQ ++D NQ+
Sbjct: 99 RNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNNQLA 158
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ + E L NL+ + L N++T++ ++ L L LY+ N+ T F ++I L++L
Sbjct: 159 NLPQ-EITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTF-PEEITQLQKL 216
Query: 226 RTVDLSYNKI 235
+ +DL N++
Sbjct: 217 QGLDLGGNQL 226
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L WL L+NN+L +L ++ L L+LL + N+L LP +I
Sbjct: 132 NRLTTLPEEIAQFQKLQWLSLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY NR T+ + L KLQ ++ NQ+T + + E L NL ++ L NQ+
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPK-EIGRLQNLKALHLGGNQLA 250
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++ L L L LS NQLT L +I L+ L+T+ L N I
Sbjct: 251 ILPEEITQLQNLQTLILSGNQLTT-LPKEIGRLQNLQTLILKGNPI 295
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L N +T + E A ++++L+V N T+ + L L L L N+L +L +
Sbjct: 173 LFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKE 232
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L L+ L + NQL LP +I L +L + N++T+L + L LQ +
Sbjct: 233 IGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKG 292
Query: 162 NQITMVRRDEFQNL 175
N I R Q L
Sbjct: 293 NPIVSKERQRIQQL 306
>gi|328716327|ref|XP_003245897.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Acyrthosiphon
pisum]
Length = 559
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + + LT + ++R T L L+L N+L +L ++G L+ LQ L + +N L LP
Sbjct: 83 RLDLSKSGLTKVPITIRDATQLTELYLYGNKLITLPSEIGCLTNLQTLALSENSLTCLPD 142
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L L +N++T + ++ L L + FN+I V D+ L NL +SL
Sbjct: 143 SLANLTSLKVLDLRHNKLTEVPDVVYKLDTLTTLFLRFNRIRTV-SDDISKLVNLVMLSL 201
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ N+I ++S + L K+ +SHN L E L ++I +L T+DL +N++
Sbjct: 202 RENKIKELSSGIGKLDKVVTFDVSHNHL-EHLPEEIGNCIQLSTLDLQHNEL 252
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L+V N +T L + ++ L L L L+NN LK L +G L KL++L +E+N+LE LP
Sbjct: 385 ELNVATNMITKLPDDIQYLQSLEVLILSNNLLKRLPATIGNLQKLRVLDLEENKLETLPQ 444
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I +L L +N++ SL + LT L ++ N+++ + +E L NL+++ +
Sbjct: 445 EIGYLRELQKLILQSNQLLSLPRAIGHLTNLAYLSVGENKLSTL-PEEIGTLENLEALYI 503
Query: 184 QNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+NQ + + L+ +KL L + + L++ L D ++G L ++Y K+N
Sbjct: 504 NDNQSLHHLPFELALCSKLQLLGIENCPLSQ-LGDAVKGGPSLV---MTYLKVN 553
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
LT LN + +N L SL +G+ + + L + N + LP DIQ L L +NN +
Sbjct: 360 LTKLN---MKDNALTSLPLDVGSWTNMVELNVATNMITKLPDDIQYLQSLEVLILSNNLL 416
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L KL+V +++ N++ + + E L L + LQ+NQ+ S+ ++ LT L
Sbjct: 417 KRLPATIGNLQKLRVLDLEENKLETLPQ-EIGYLRELQKLILQSNQLLSLPRAIGHLTNL 475
Query: 202 AYLYLSHNQLT 212
AYL + N+L+
Sbjct: 476 AYLSVGENKLS 486
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 24/183 (13%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D L +L L L +N +T + + + T+ L + FN + ++++ + L +L L L
Sbjct: 142 DSLANLTSLKVLDLRHNKLTEVPDVVYKLDTLTTLFLRFNRIRTVSDDISKLVNLVMLSL 201
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN----------- 139
N++K L +G L K+ + N LE LP +I QL +L +N
Sbjct: 202 RENKIKELSSGIGKLDKVVTFDVSHNHLEHLPEEIGNCIQLSTLDLQHNELVDIPETIGN 261
Query: 140 ------------RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
R+ +L L ++ FN++ N ++ + NL ++SI+L N
Sbjct: 262 LTLLTRLGLRYNRLKNLPNSLSNCNRMDEFNVEGNMLSCLPDGLLVNLKEMNSITLARNS 321
Query: 188 ITS 190
T+
Sbjct: 322 FTA 324
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 16 NLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTI------RKLHVGF 69
N+++L T DD++ +L L+L NN + + P TI R L +
Sbjct: 382 NMVELNVATNMITKLPDDIQYLQSLEVLILSNNLLKRL-----PATIGNLQKLRVLDLEE 436
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L L +N+L SL +G L+ L L + +N+L LP +I
Sbjct: 437 NKLETLPQEIGYLRELQKLILQSNQLLSLPRAIGHLTNLAYLSVGENKLSTLPEEIGTLE 496
Query: 130 QLGSLYANNNR 140
L +LY N+N+
Sbjct: 497 NLEALYINDNQ 507
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N+LT L +SL LT L L L +N+L + + L L L + N++ +
Sbjct: 127 LQTLALSENSLTCLPDSLANLTSLKVLDLRHNKLTEVPDVVYKLDTLTTLFLRFNRIRTV 186
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
DI L L N+I L + L K+ F++ N + + +E N L ++
Sbjct: 187 SDDISKLVNLVMLSLRENKIKELSSGIGKLDKVVTFDVSHNHLEHL-PEEIGNCIQLSTL 245
Query: 182 SLQNNQITSMNSSL 195
LQ+N++ + ++
Sbjct: 246 DLQHNELVDIPETI 259
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLD-GLLRG 150
NRLK+L L +++ +E N L LP + + ++ S+ N T+ G
Sbjct: 273 NRLKNLPNSLSNCNRMDEFNVEGNMLSCLPDGLLVNLKEMNSITLARNSFTAYPTGGPAQ 332
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
+ N + N+I + F + L +++++N +TS+ + T + L ++ N
Sbjct: 333 FIAVDSINFEHNKIDKIPYGIFSKANYLTKLNMKDNALTSLPLDVGSWTNMVELNVATNM 392
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+T+ L DDI+ L+ L + LS N + +
Sbjct: 393 ITK-LPDDIQYLQSLEVLILSNNLLKRL 419
>gi|327273085|ref|XP_003221313.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 3-like [Anolis carolinensis]
Length = 1102
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPP-TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
LK +L TL L NNNI+ + FPP ++ LH+ NN
Sbjct: 119 LKPFQSLETLDLSNNNISVLKMGTFPPLMLKHLHI-----------------------NN 155
Query: 93 NRLKSLE-GQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LR 149
NR+ SLE G LS LQ+L + +N++ A+P I L L N NRI +DGL +
Sbjct: 156 NRIVSLEPGTFDNLSSTLQVLKLNRNRISAIPQKIFKLPHLQHLEMNRNRIRKIDGLTFQ 215
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSH 208
GL L+ + N + + F L N++ + L +N +T + L GL L L+LSH
Sbjct: 216 GLPSLKSLRLQRNGLARLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQQLHLSH 275
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
N ++ D ++L +DL+YN + +
Sbjct: 276 NTISRINPDAWEFCQKLSELDLTYNNLAR 304
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
Query: 60 PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQ 117
P+++ L + N L L + + GL+++ L L++N L + +G L L LQ L + N
Sbjct: 218 PSLKSLRLQRNGLARLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQQLHLSHNT 277
Query: 118 LEALPSDIQLFSQ-LGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+ + D F Q L L N + L D GL+ L N+ N+++ + F+ L
Sbjct: 278 ISRINPDAWEFCQKLSELDLTYNNLARLEDSSFVGLSLLLRLNIGNNKVSYIADCAFRGL 337
Query: 176 HNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+L ++ L+NN+I+ MN + SGL KL +L L N++ GL L +DLS
Sbjct: 338 TSLQTLDLKNNEISWTIEDMNGAFSGLDKLKWLLLQGNRIRSITKKAFSGLDALEHLDLS 397
Query: 232 YNKI 235
N I
Sbjct: 398 NNAI 401
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSL-NNSLRGLTDL 85
+T L G L L L +N I+ I+ +A F + +L + +NNL L ++S GL+ L
Sbjct: 257 ITKGWLYGLLMLQQLHLSHNTISRINPDAWEFCQKLSELDLTYNNLARLEDSSFVGLSLL 316
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L + NN++ + + L+ LQ L ++ N++ I +
Sbjct: 317 LRLNIGNNKVSYIADCAFRGLTSLQTLDLKNNEISWT-------------------IEDM 357
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 203
+G GL KL+ + N+I + + F L L+ + L NN I S+ + S + L
Sbjct: 358 NGAFSGLDKLKWLLLQGNRIRSITKKAFSGLDALEHLDLSNNAIMSVQGNTFSQMKNLKE 417
Query: 204 LYLSHNQL 211
LYL+ + L
Sbjct: 418 LYLNTSSL 425
>gi|291234605|ref|XP_002737242.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
kowalevskii]
Length = 679
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 96/172 (55%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + + ++ L +S++ LT L L+L NRL+ L ++G LS LQ L + +N L +LP
Sbjct: 64 RLDLSKSCISVLPSSIKDLTQLVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLTSLPV 123
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
++ + L +N++ + ++ LT L + FN+I+ V +E NL NL +SL
Sbjct: 124 SLERLKVIKVLDLRHNKLKEIPEVVYRLTSLTTLFLRFNRISDV-DEELSNLTNLTMLSL 182
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ N+I + + LT L +SHN L E L +I ++L ++DL +N++
Sbjct: 183 RENKIRKLPQGIGNLTHLITFDVSHNHL-EHLPSEIGNCEQLSSLDLQHNEL 233
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++G N L+ L ++ LT L L L+NN LK L +G L K+++L +E+N+LE+
Sbjct: 363 SMVELNLGTNQLSKLPEDIQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLES 422
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LPS+I L L +N++++L + L LQ ++ N +T + +E L NL+
Sbjct: 423 LPSEIAYLCSLQRLVLQSNQLSTLPRNIGHLGTLQYLSVGENNLTSL-PEEIGTLENLEQ 481
Query: 181 ISLQNN 186
+ L +N
Sbjct: 482 LYLNDN 487
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 26 SHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTD 84
S P++ + LK + L L +N + I E + T + L + FN ++ ++ L LT+
Sbjct: 120 SLPVSLERLK---VIKVLDLRHNKLKEIPEVVYRLTSLTTLFLRFNRISDVDEELSNLTN 176
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L L N+++ L +G L+ L + N LE LPS+I QL SL +N + L
Sbjct: 177 LTMLSLRENKIRKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLSSLDLQHNELLDL 236
Query: 145 D---GLLRGLTKL--------------------QVFNMDFNQITMVRRDEFQNLHNLDSI 181
G LR L++L + FN++ N I+ + +L NL S+
Sbjct: 237 PDSLGNLRQLSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGLLSSLVNLTSL 296
Query: 182 SLQNNQITSMNSSLSGLTKLAYLY---LSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N S + G T+ A +Y + HN +T+ K L +++ N++
Sbjct: 297 CLSRNNFNSY--PIGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLNMKENQL 351
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 9/185 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEA 120
+ +L + +N L ++ SL D+ + NN + SL EG L +L L L + +N +
Sbjct: 246 LSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGLLSSLVNLTSLCLSRNNFNS 305
Query: 121 LPSDIQLFSQLGSLYANN---NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
P I +Q ++Y+ N N IT + G+ L NM NQ+T + D +
Sbjct: 306 YP--IGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLD-VGSWM 362
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
++ ++L NQ++ + + LT L L LS+N L + L I L+++R +DL NK+
Sbjct: 363 SMVELNLGTNQLSKLPEDIQALTSLEVLILSNNLLKK-LPRGIGNLQKMRVLDLEENKLE 421
Query: 237 KFGTR 241
+
Sbjct: 422 SLPSE 426
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 34 LKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
+K L+ L L N + ++ +E + ++KL + N+LTSL SL L + L L +
Sbjct: 79 IKDLTQLVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLTSLPVSLERLKVIKVLDLRH 138
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N+LK + + L+ L L + N++ + ++ + L L N+I L + LT
Sbjct: 139 NKLKEIPEVVYRLTSLTTLFLRFNRISDVDEELSNLTNLTMLSLRENKIRKLPQGIGNLT 198
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L F++ N + + E N L S+ LQ+N++ + SL L +L+ L L +N+L
Sbjct: 199 HLITFDVSHNHLEHL-PSEIGNCEQLSSLDLQHNELLDLPDSLGNLRQLSRLGLRYNRL 256
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
+ LT LN + N+L +L +G+ + L + NQL LP DIQ + L L +NN
Sbjct: 339 KYLTKLN---MKENQLTALPLDVGSWMSMVELNLGTNQLSKLPEDIQALTSLEVLILSNN 395
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
+ L + L K++V +++ N++ + E L +L + LQ+NQ++++ ++ L
Sbjct: 396 LLKKLPRGIGNLQKMRVLDLEENKLESL-PSEIAYLCSLQRLVLQSNQLSTLPRNIGHLG 454
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L YL + N LT L ++I L+ L + L+ N
Sbjct: 455 TLQYLSVGENNLTS-LPEEIGTLENLEQLYLNDN 487
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR-LKSLEGQLGTLSKLQLLVIEQNQLE 119
T++ L VG NNLTSL + L +L L+LN+N L +L +L S LQ++ IE L
Sbjct: 455 TLQYLSVGENNLTSLPEEIGTLENLEQLYLNDNPNLHNLPFELALCSSLQIMSIENCPLS 514
Query: 120 ALPSDI 125
LP ++
Sbjct: 515 QLPQEV 520
>gi|426215732|ref|XP_004002123.1| PREDICTED: leucine-rich repeat-containing protein 40 [Ovis aries]
Length = 602
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN++T++ +S S L+ L
Sbjct: 142 ILPEEITNLRNLKGLYLQHNELTCI-PEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL L ++ G+KRL+ +D + N
Sbjct: 201 RLNLSSNQLKS-LPAELSGMKRLKHLDCNSN 230
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L +P + S L L +NNR+T++ L+ L N
Sbjct: 144 PEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+ + E + L + +N + ++ L+ + L LYL N+L L +
Sbjct: 204 LSSNQLKSLPA-ELSGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLR--FLPE 260
Query: 219 IRGLKRLRTVDLSYNKINKFGT 240
K L+ + + N+I K G
Sbjct: 261 FPSCKLLKELHVGENQIEKLGA 282
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
Query: 45 LVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L NN +T + + +F ++ +L++ N L SL L G+ L L N+N L+++ +L
Sbjct: 181 LSNNRLTTVPASFSFLSSLVRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLETIPPELA 240
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFN 162
++ L+LL + +N+L LP + L L+ N+I L L+ L + V ++ N
Sbjct: 241 SMESLELLYLRRNKLRFLP-EFPSCKLLKELHVGENQIEKLGAEHLKHLNSILVLDLRDN 299
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++ V DE L +L+ + L NN I+S+ SL G L +L L N L
Sbjct: 300 KLKSVP-DEITLLQSLERLDLSNNDISSLPCSL-GRLHLKFLALEGNPL 346
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N L+ N+L S+ +L TL KL L + N L +LP +++ ++L ++ + NR
Sbjct: 451 VSDVN---LSYNKLSSISLELCTLQKLTFLDLRNNFLNSLPEEMESLTRLQTINLSFNRF 507
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ + + + + NL ++ LQNN + + L L
Sbjct: 508 KILPEVLYRIPTLETVLISNNQVGALDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNL 567
Query: 202 AYLYLSHN 209
L L N
Sbjct: 568 RTLLLDGN 575
>gi|402881488|ref|XP_003904303.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Papio anubis]
Length = 582
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LSKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
Length = 462
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 36/240 (15%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAF---PPTI------RKLHVGFNNLTSLNNSL 79
L+ + L+ P+ I L VN I H+++N PP I +L++ NNL +L ++
Sbjct: 155 LSGNKLRTLPSEIGEL-VNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETI 213
Query: 80 RGLTDLNW-LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE------------------- 119
L D W L+LN N+LK+L ++G L L +L + N+LE
Sbjct: 214 ENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNG 273
Query: 120 ----ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
ALP I+ +L LY N N++ +L + L L V +++ N++ + E L
Sbjct: 274 NNLEALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLERL-PPEIGEL 332
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L ++ L +N+ ++ S + L L +L+LS N+L E L I LK LR +DLS NK+
Sbjct: 333 EGLYTLYLNDNEFETLPSEIGKLKNLRHLHLSGNKL-ERLPYVIAELKNLRELDLSGNKL 391
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 3/178 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L + N L +L + + L +L L LN+N+L+ L ++G L L L + N LEAL
Sbjct: 150 LRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEAL 209
Query: 122 PSDIQ-LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P I+ L +L LY N N++ +L + L L + +++ N++ + E L NL
Sbjct: 210 PETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERL-PPEIGRLKNLRE 268
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L N + ++ ++ L KL YLYL+ N+L + L +I LK L + L+ NK+ +
Sbjct: 269 LGLNGNNLEALPETIRELKKLQYLYLNGNKL-KTLPPEIGELKWLLVLHLNGNKLERL 325
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAF---PPTI------RKLHVGFNNLTSLNNSL 79
L + LK P I L VN I H+++N PP I R+L + NNL +L ++
Sbjct: 225 LNGNKLKTLPPEIGEL-VNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPETI 283
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
R L L +L+LN N+LK+L ++G L L +L + N+LE LP +I L +LY N+N
Sbjct: 284 RELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLERLPPEIGELEGLYTLYLNDN 343
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRR--DEFQNLHNLDSISLQNNQITSMNSSL 195
+L + L L+ ++ N++ + E +NL LD L N++ ++ S +
Sbjct: 344 EFETLPSEIGKLKNLRHLHLSGNKLERLPYVIAELKNLRELD---LSGNKLETLPSYI 398
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ PP I +L ++ N +L+ + L +L +L L +N+L+ L ++G L L+
Sbjct: 93 SLPPEIGELESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSPEIGRLKNLRE 152
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + N+L LPS+I LG L+ N+N++ L + L L ++ N + + +
Sbjct: 153 LDLSGNKLRTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEAL-PE 211
Query: 171 EFQNLHN-LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+NL + L + L N++ ++ + L L L+L+ N+L E L +I LK LR +
Sbjct: 212 TIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKL-ERLPPEIGRLKNLRELG 270
Query: 230 LSYN 233
L+ N
Sbjct: 271 LNGN 274
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 3/168 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L SL + L L+ L+LN N ++L +G L L+ L + N+LE L +I L
Sbjct: 91 LRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSPEIGRLKNL 150
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N++ +L + L L + +++ N++ + E L +L + L N + ++
Sbjct: 151 RELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERL-PPEIGRLKDLWRLYLNGNNLEAL 209
Query: 192 NSSLSGLT-KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++ L +L YLYL+ N+L + L +I L L + L+ NK+ +
Sbjct: 210 PETIENLKDRLWYLYLNGNKL-KTLPPEIGELVNLGILHLNDNKLERL 256
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
VG+ TS R D + L N + SL + L L L + + +L +LP +I
Sbjct: 44 VGYEACTS--QKCRMDIDYGYPLLKN--ITSLHDVIEELKYLCCLDLSRKELRSLPPEIG 99
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L LY N N +L ++ L L+ ++ N++ + E L NL + L N
Sbjct: 100 ELESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNKLERL-SPEIGRLKNLRELDLSGN 158
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
++ ++ S + L L L+L+ N+L E L +I LK L + L+ N
Sbjct: 159 KLRTLPSEIGELVNLGILHLNDNKL-ERLPPEIGRLKDLWRLYLNGN 204
>gi|260788636|ref|XP_002589355.1| hypothetical protein BRAFLDRAFT_150406 [Branchiostoma floridae]
gi|229274532|gb|EEN45366.1| hypothetical protein BRAFLDRAFT_150406 [Branchiostoma floridae]
Length = 165
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LTS+ + G+TDL L ++NN+L S+ +G L KL L N L LP I +L
Sbjct: 6 LTSIPEEVFGITDLEVLDVSNNKLNSIPETIGRLQKLYRLDAYSNLLTCLPQAIGSLQKL 65
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY +N++ +L + L KL+V ++ NQ+T V +L NL+ +S++NN++++
Sbjct: 66 THLYVYSNKLPNLPPGIEKLQKLKVLSIKDNQLTEVPSG-VCSLPNLEVLSVRNNKLSTF 124
Query: 192 NSSLSGLTKLAYLYLSHNQLTEF 214
+ L KL LY+ NQLTE
Sbjct: 125 PRGVEKLQKLRELYIGDNQLTEV 147
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Query: 56 NAFPPTIRKLHVGF------NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
N+ P TI +L + N LT L ++ L L L++ +N+L +L + L KL+
Sbjct: 30 NSIPETIGRLQKLYRLDAYSNLLTCLPQAIGSLQKLTHLYVYSNKLPNLPPGIEKLQKLK 89
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
+L I+ NQL +PS + L L NN++++ + L KL+ + NQ+T V
Sbjct: 90 VLSIKDNQLTEVPSGVCSLPNLEVLSVRNNKLSTFPRGVEKLQKLRELYIGDNQLTEVPS 149
Query: 170 DEFQNLHNLDSISLQNN 186
+L NL+ +S+ NN
Sbjct: 150 G-VCSLPNLEVLSVGNN 165
>gi|431908110|gb|ELK11713.1| Protein scribble like protein [Pteropus alecto]
Length = 1502
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 52 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 104
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LEALP+++ + L
Sbjct: 105 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEALPAELGGLALL 164
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + D N++ V + + NL + L N +T++
Sbjct: 165 TDLLLSQNLLQRLPDGIGQLKQLSILKADQNRLCEV-TEAIGDCENLSELILTENLLTAL 223
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL L KL L + N+L E L +I G L + L N++
Sbjct: 224 PRSLGRLAKLTNLNVDRNRL-EMLPPEIGGCTALSVLSLRDNRL 266
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L++L
Sbjct: 3 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQAL 62
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 63 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 122
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ ++ + L GL L L LS N L + L D
Sbjct: 123 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEALPAELGGLALLTDLLLSQN-LLQRLPDG 180
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + N++
Sbjct: 181 IGQLKQLSILKADQNRL 197
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L + ++ +L+ L L N L +L LG L+KL L +++N+LE LP +I +
Sbjct: 195 NRLCEVTEAIGDCENLSELILTENLLTALPRSLGRLAKLTNLNVDRNRLEMLPPEIGGCT 254
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISLQNNQI 188
L L +NR+ L L +L V ++ N++ + F H NL ++ L NQ
Sbjct: 255 ALSVLSLRDNRLAILPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWLAENQA 311
Query: 189 TSM 191
M
Sbjct: 312 QPM 314
>gi|418731390|ref|ZP_13289789.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410773922|gb|EKR53943.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 315
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L WL L+NN+L +L ++ L L+LL + N+L LP +I
Sbjct: 132 NRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY NR T+ + L KLQ ++ NQ+T + + E L NL ++ L NQ+
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPK-EIGRLQNLKALHLGGNQLA 250
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++ L L L LS NQLT L +I L+ L+T+ L N I
Sbjct: 251 ILPEEITQLQNLQTLILSGNQLTT-LPKEIGRLQNLQTLILKGNPI 295
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 46 VNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
V +N+T +N P +R+L + LT+L + L +L L L +NRL +L ++ L
Sbjct: 41 VYHNLTEALQN--PKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQL 98
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
LQ L + NQ LP +I L L N+NR+T+L + KLQ +D NQ+
Sbjct: 99 RNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLA 158
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ + E L NL+ + L N++T++ ++ L L LY+ N+ T F ++I L++L
Sbjct: 159 NLPQ-EITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTF-PEEITQLQKL 216
Query: 226 RTVDLSYNKI 235
+ +DL N++
Sbjct: 217 QGLDLGGNQL 226
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L N +T + E A ++++L+V N T+ + L L L L N+L +L +
Sbjct: 173 LFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKE 232
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L L+ L + NQL LP +I L +L + N++T+L + L LQ +
Sbjct: 233 IGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKG 292
Query: 162 NQITMVRRDEFQNL 175
N I R Q L
Sbjct: 293 NPIVSKERQRIQQL 306
>gi|317419043|emb|CBN81081.1| Leucine-rich repeats and immunoglobulin-like domains protein 1
[Dicentrarchus labrax]
Length = 709
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 29/203 (14%)
Query: 42 TLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
TL L NN+IT + FP ++ + L+L+NN++ LE
Sbjct: 138 TLDLSNNDITELRGPCFPAGLQ---------------------IRDLYLSNNKIIVLE-- 174
Query: 102 LGTL----SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQV 156
LG L S LQ+L + +N++ +P +L L N NRI ++GL +GL+ L+V
Sbjct: 175 LGALDHLGSTLQVLRLSRNRISQIPVRAFQLPRLTQLELNRNRIRQVEGLTFKGLSSLEV 234
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFL 215
+ N I+ + F +L + + L N +T +NS SL GLT L L+LS+N +
Sbjct: 235 LKLQRNSISKLTDGAFWDLAKMKVLHLDYNSLTEVNSGSLYGLTSLQQLFLSNNSIARIN 294
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
D + ++LR ++LSYN + +
Sbjct: 295 ADGWKFCQKLRELNLSYNNLTRL 317
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFL 90
KG +L L L N+I+ + + AF ++ LH+ +N+LT +N+ SL GLT L LFL
Sbjct: 226 FKGLSSLEVLKLQRNSISKLTDGAFWDLAKMKVLHLDYNSLTEVNSGSLYGLTSLQQLFL 285
Query: 91 NNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGL 147
+NN + + KL+ L + N L L + + L +L +N I+ + +G
Sbjct: 286 SNNSIARINADGWKFCQKLRELNLSYNNLTRLDEGSLAVLGDLQTLRLGHNSISHITEGA 345
Query: 148 LRGL-TKLQVFNMDFNQITMVRRDEFQNL----HNLDSISLQNNQITSM-NSSLSGLTKL 201
RGL +L+V + N + L H ++L N+I S+ + SGL L
Sbjct: 346 FRGLKAQLRVCFISSNPHLPELHTQTHTLSLCQHTQAQMTLFGNKIKSVAKKAFSGLETL 405
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+L L N + D +K L+T+
Sbjct: 406 EHLNLGENAIRSIQPDAFSKMKNLKTL 432
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 90 LNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-L 147
L +N+L + + L L+ L ++ N+L ++P+ Q S++ SLY ++N+I S+DG
Sbjct: 70 LGHNKLTAFSVEAFDNLPNLRELRLDHNELTSIPNLGQAASKIVSLYLHHNKIRSIDGRR 129
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGL-TKLAYLY 205
R L ++ ++ N IT +R F + + L NN+I + +L L + L L
Sbjct: 130 TRELVSVETLDLSNNDITELRGPCFPAGLQIRDLYLSNNKIIVLELGALDHLGSTLQVLR 189
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
LS N++++ + + L RL ++L+ N+I +
Sbjct: 190 LSRNRISQIPVRAFQ-LPRLTQLELNRNRIRQ 220
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
N+ N++T + F NL NL + L +N++TS+ + +K+ LYL HN++
Sbjct: 68 LNLGHNKLTAFSVEAFDNLPNLRELRLDHNELTSIPNLGQAASKIVSLYLHHNKIRSIDG 127
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
R L + T+DLS N I +
Sbjct: 128 RRTRELVSVETLDLSNNDITEL 149
>gi|168269502|dbj|BAG09878.1| leucine-rich repeat protein SHOC-2 [synthetic construct]
Length = 582
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPLELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|403303038|ref|XP_003942154.1| PREDICTED: protein scribble homolog [Saimiri boliviensis
boliviensis]
Length = 1730
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 205 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 257
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG+L +L L + +N+LE LP+++ L
Sbjct: 258 LEVLPDTLGALPNLRELWLDRNQLSALPPELGSLRRLVCLDVSENRLEELPAELGGLVLL 317
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 318 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 376
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + NQL E L +I G L + L N++
Sbjct: 377 PRSLGKLTKLTNLNVDRNQLEE-LPPEIGGCVALSVLSLRDNRL 419
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 156 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 215
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 216 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 275
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E +L L + + N++ + + L GL L L LS N L L D
Sbjct: 276 LDRNQLSAL-PPELGSLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 333
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 334 IGQLKQLSILKVDQNRL 350
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++NQLE LP +
Sbjct: 343 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNQLEELPPE 402
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L ++L V ++ N++ + F H NL ++ L
Sbjct: 403 IGGCVALSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRLQSL---PFALTHLNLKALWL 459
Query: 184 QNNQITSM 191
NQ M
Sbjct: 460 AENQAQPM 467
>gi|320164611|gb|EFW41510.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 853
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
G AL L L NN IT I NAF + +++ N +T L+ + GL L L+L
Sbjct: 150 FTGLTALRWLPLSNNQITSIAANAFNGLSAVTLIYLQTNQITDLSPATFTGLAALTELYL 209
Query: 91 NNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDG-L 147
N++ S+ L+ L+ L ++ N++ +P S S L L +N+IT +
Sbjct: 210 MGNQITSIHASTFAGLTSLENLDLQDNKITEVPASAFTDLSALTGLTLQDNQITEIPASA 269
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYL 206
GLT L++ N+ NQIT + F +L L++++LQ+NQITS+ S+ + LT L L L
Sbjct: 270 FAGLTVLEILNLQGNQITNIPETVFADLTALETLNLQDNQITSIPASAFADLTALRSLDL 329
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N +T GL L + L NKI
Sbjct: 330 QDNNITSIPASVFTGLSALNELKLHTNKI 358
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRG-LTDLNWLFLNNNRL 95
AL L L +N IT I +AF + L++ N +T++ ++ LT L L L +N++
Sbjct: 251 ALTGLTLQDNQITEIPASAFAGLTVLEILNLQGNQITNIPETVFADLTALETLNLQDNQI 310
Query: 96 KSLEGQ-LGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDG-LLRGLT 152
S+ L+ L+ L ++ N + ++P+ + S L L + N+IT L + LT
Sbjct: 311 TSIPASAFADLTALRSLDLQDNNITSIPASVFTGLSALNELKLHTNKITDLSASVFASLT 370
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQL 211
L V + NQIT + + F L L + L + QITS + + + LT L LYL NQ+
Sbjct: 371 ALAVLELQSNQITEISANAFTGLTALTKLDLSSCQITSFSVDAFTSLTALRDLYLHFNQI 430
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
T GL L + L+YN+I T
Sbjct: 431 TSIPASAFTGLTALYVLILAYNQITSLPT 459
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRL 95
AL L L +N IT I NAF + KL + +TS + ++ LT L L+L+ N++
Sbjct: 371 ALAVLELQSNQITEISANAFTGLTALTKLDLSSCQITSFSVDAFTSLTALRDLYLHFNQI 430
Query: 96 KSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
S+ T L+ L +L++ NQ+ +LP++ GLT L
Sbjct: 431 TSIPASAFTGLTALYVLILAYNQITSLPTNT----------------------FTGLTAL 468
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTE 213
+ FN IT + + F +L +L + L NNQITS+++ + +GL L YL LS N T
Sbjct: 469 NTLTLSFNPITSISANTFTDLTSLFFLILNNNQITSISANAFAGLPGLKYLVLSDNPFTT 528
Query: 214 FLLDDIRGLKRLRTVDLS--YNKINKF 238
+GL ++ LS Y + N F
Sbjct: 529 LPPGLFQGLPNGLSLSLSGQYLRPNNF 555
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 35 KGTPALITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFL 90
G P T+L L +N IT I +AF + L + +N +TS+ ++ GL L L L
Sbjct: 54 TGIPVDTTMLRLSSNQITGIAPSAFTGLTALTVLSLSYNQITSIPVSAFAGLDALTRLDL 113
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLR 149
++N + S+ A PS + L L N ITS+ L
Sbjct: 114 SSNLITSISA------------------SAFPS----LTALTELNLQGNLITSIPASLFT 151
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSH 208
GLT L+ + NQIT + + F L + I LQ NQIT ++ ++ +GL L LYL
Sbjct: 152 GLTALRWLPLSNNQITSIAANAFNGLSAVTLIYLQTNQITDLSPATFTGLAALTELYLMG 211
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
NQ+T GL L +DL NKI +
Sbjct: 212 NQITSIHASTFAGLTSLENLDLQDNKITE 240
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L +P+ I + + + L ++N+IT + GLT L V ++ +NQIT + F L
Sbjct: 49 LTTIPTGIPVDTTM--LRLSSNQITGIAPSAFTGLTALTVLSLSYNQITSIPVSAFAGLD 106
Query: 177 NLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L + L +N ITS++ S+ LT L L L N +T GL LR + LS N+I
Sbjct: 107 ALTRLDLSSNLITSISASAFPSLTALTELNLQGNLITSIPASLFTGLTALRWLPLSNNQI 166
Query: 236 NKFG 239
Sbjct: 167 TSIA 170
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 10/177 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNS-LRGLTDL 85
++++ G AL L L + IT +AF +R L++ FN +TS+ S GLT L
Sbjct: 385 ISANAFTGLTALTKLDLSSCQITSFSVDAFTSLTALRDLYLHFNQITSIPASAFTGLTAL 444
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLY---ANNNRI 141
L L N++ SL T L+ L L + N + ++ ++ F+ L SL+ NNN+I
Sbjct: 445 YVLILAYNQITSLPTNTFTGLTALNTLTLSFNPITSISANT--FTDLTSLFFLILNNNQI 502
Query: 142 TSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
TS+ GL L+ + N T + FQ L N S+SL + N +L G
Sbjct: 503 TSISANAFAGLPGLKYLVLSDNPFTTLPPGLFQGLPNGLSLSLSGQYLRPNNFTLGG 559
>gi|40788390|dbj|BAA74885.2| KIAA0862 protein [Homo sapiens]
Length = 584
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 112 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 164
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 165 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 223
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 224 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 275
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 129 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 188
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 189 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 247
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 248 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 301
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 405 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 464
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 465 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 523
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 524 LYLNDNPNLHSLPLELALCSKLSIMSIENCPLSHLPPQIVAG 565
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 199 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 258
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 259 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 317
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 318 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 377
Query: 242 NEGK 245
+ K
Sbjct: 378 SRAK 381
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 242 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 301
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 302 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 361
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 362 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 420
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 421 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 462
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 245 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 304
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 305 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 364
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 365 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 423
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 424 SGLVSLEVLILSNNLLKKL 442
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 421 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 480
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 481 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELA 540
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 541 LCSKLSIMSIE 551
>gi|398341320|ref|ZP_10526023.1| cytoplasmic membrane protein [Leptospira kirschneri serovar Bim
str. 1051]
Length = 353
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N L ++ + L L L L+ NRL ++ ++G L LQ+L ++ NQ+ +
Sbjct: 111 SLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVS 170
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I+ +L L NNR ++ G L LQ N+ NQ+ + ++ Q L NL
Sbjct: 171 LPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQ-LQNLRD 229
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQIT + + + L L LYLS NQ T L +I LK LR + L N++
Sbjct: 230 LVLDRNQITILPTEVLQLQNLQELYLSENQFTS-LPKEIDKLKNLRWLSLKNNRL 283
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 95/186 (51%), Gaps = 8/186 (4%)
Query: 56 NAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
NA P I +L + N + SL + GL +L L L NNR K++ G+ L LQ
Sbjct: 146 NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQ 205
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + +NQL ++P +I L L + N+IT L + L LQ + NQ T + +
Sbjct: 206 KLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPK 265
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
E L NL +SL+NN++T++ + L L L L +NQLT L +I LK L+ ++
Sbjct: 266 -EIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTN-LPKEIGQLKNLQRLE 323
Query: 230 LSYNKI 235
L N +
Sbjct: 324 LDSNPL 329
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N+ +R L + F NLTS + +L L L+ N L L ++ L L
Sbjct: 32 NLTKALQNS--SNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNL 89
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + N+L LP +I+ L +L N++ ++ + L L+ N+ N++ V
Sbjct: 90 QELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVP 149
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+ E L NL + L +NQI S+ + GL +L L L +N+ + ++ LK L+ +
Sbjct: 150 K-EIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQ-LKNLQKL 207
Query: 229 DLSYNKI 235
+LS N++
Sbjct: 208 NLSENQL 214
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N TSL + L +L WL L NNRL +L ++G L LQ L + NQL L
Sbjct: 250 LQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNL 309
Query: 122 PSDIQLFSQLGSLYANNNRITS 143
P +I L L ++N ++S
Sbjct: 310 PKEIGQLKNLQRLELDSNPLSS 331
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N +T L + L +L L+L+ N+ SL ++ L L+ L ++ N+L L
Sbjct: 227 LRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTL 286
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
P +I L L NN++T+L + L LQ +D N ++ +++
Sbjct: 287 PKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLSSKEKEKV 337
>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 498
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 23/189 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +T+L + L +L WL L+ N+L L ++G L LQ L + QNQL LP +I
Sbjct: 288 NRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 347
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD------------------- 170
L L + N++T+L + L L+V ++D NQ+T + ++
Sbjct: 348 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 407
Query: 171 ---EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E L NL ++L +NQ+T++ + L L L L NQLT F +IR LK L+
Sbjct: 408 LPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTF-PKEIRQLKNLQE 466
Query: 228 VDLSYNKIN 236
+ L N ++
Sbjct: 467 LHLYLNPLS 475
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQ---- 115
+++L + N LT+L +R L +L L L+ N+L +L ++G L L+ L++ Q
Sbjct: 188 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 247
Query: 116 -----------------NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
NQL LP +I L L NRIT+L + L LQ +
Sbjct: 248 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 307
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T++ + E L NL + L NQ+T++ + L L L L NQLT L +
Sbjct: 308 LHQNQLTILPK-EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT-TLPKE 365
Query: 219 IRGLKRLRTVDLSYNKI 235
I L+ LR +DL N++
Sbjct: 366 IEQLQNLRVLDLDNNQL 382
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ LT+L + L +L L L +N+L +L ++G L L++LV+ +N++ AL
Sbjct: 234 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 293
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N++T L + L LQ ++ NQ+T + + E L NL +
Sbjct: 294 PKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPK-EIGQLQNLQEL 352
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+T++ + L L L L +NQLT + +R L+ L+ + L N+++
Sbjct: 353 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLR-LQSLQVLALGSNRLS 406
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ LT+L + L +L L L+ N L +L ++G L LQ L + QN+L L
Sbjct: 119 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++T+L +R L LQ ++ NQ+T + + E L NL ++
Sbjct: 179 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK-EIGQLQNLKTL 237
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L Q+T++ + L L L L NQLT L +I L+ L + L N+I
Sbjct: 238 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLT-TLPKEIGELQNLEILVLRENRI 290
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + FN+LT+L + L +L L LN+ +L +L ++G L LQ L + N L L
Sbjct: 96 LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L L + NR+ +L + L LQ +++ N++T + + E + L NL +
Sbjct: 156 PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK-EIRQLRNLQEL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L QLT L +I L+ L+T++L N++
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT-TLPKEIGELQNLKTLNLLDNQL 267
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT+L + L L L L +NRL +L ++G L LQ+L + NQL L
Sbjct: 372 LRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTL 431
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L + N++T+ +R L LQ ++ N ++ + + L
Sbjct: 432 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIRRL 485
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L +G N L++L + L +L L L +N+L +L ++G L LQ L +++NQL
Sbjct: 394 SLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTT 453
Query: 121 LPSDIQLFSQLGSLYANNNRITS 143
P +I+ L L+ N ++S
Sbjct: 454 FPKEIRQLKNLQELHLYLNPLSS 476
>gi|355562779|gb|EHH19373.1| hypothetical protein EGK_20064 [Macaca mulatta]
Length = 582
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
I +Q+ +L +N + L + L+ L + +N+++ + R
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 51/220 (23%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 I----------------------------------------QLF-----SQLGSLYANN- 138
+ QL+ SQ ++Y+ N
Sbjct: 303 LSKCSALEELNLENNNISTLPXSLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 139 --NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
NRI + G+ L NM NQ+T + D F ++ ++L NQ+T + +
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIPEDV 421
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 422 SGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|124002734|ref|ZP_01687586.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123991962|gb|EAY31349.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 500
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 7/212 (3%)
Query: 25 GSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGF---NNLTSLNNSLRG 81
G + L S L L +L + N +T I +N +++KL F NNLT L +
Sbjct: 180 GKNQLESVSLGKYKNLQSLDISRNRLTKIPDNLG--SLKKLTSLFLQQNNLTKLPEKIGA 237
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L+ L L+LN N++K L +L +L +LQ++ +E NQL LP+DI SQL L ++N +
Sbjct: 238 LSQLRRLYLNENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLL 297
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
+L + LT L + N++ ++ N+ +L SI ++ N + ++ S+S L K+
Sbjct: 298 RALPESIGNLTLLPTLQLSNNRLELL-PSSLGNMASLKSIWVRKNNLQTLPKSISQLKKI 356
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+Y S NQ++ L ++ L +L+++ +S N
Sbjct: 357 ERIYASQNQIS-LLPVELAELTQLKSLAISGN 387
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L +L S+ LT L L L+NNRL+ L LG ++ L+ + + +N L+ L
Sbjct: 287 LKVLSLHHNLLRALPESIGNLTLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTL 346
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I ++ +YA+ N+I+ L L LT+L+ + N +T + E L L +
Sbjct: 347 PKSISQLKKIERIYASQNQISLLPVELAELTQLKSLAISGNLLTEI-PSELWGLEELYYL 405
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQITS+ + +S L L L LSHN+L R LK LR + L N++ K
Sbjct: 406 DASRNQITSLPNKISDLRSLRILVLSHNRLRTLPFGITR-LKNLRELYLDNNQLAKL 461
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
NN+ L + L L L + N L L G++ L L L I N+++ LP +I
Sbjct: 90 NNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANNKVKELPENIGKLK 149
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
++ A N++ L L KL+ + NQ+ V +++NL +LD + N++T
Sbjct: 150 KMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLESVSLGKYKNLQSLD---ISRNRLT 206
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ +L L KL L+L N LT+ L + I L +LR + L+ NKI +
Sbjct: 207 KIPDNLGSLKKLTSLFLQQNNLTK-LPEKIGALSQLRRLYLNENKIKQL 254
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT + + L GL +L +L + N++ SL ++ L L++LV+ N+L L
Sbjct: 379 LKSLAISGNLLTEIPSELWGLEELYYLDASRNQITSLPNKISDLRSLRILVLSHNRLRTL 438
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
P I L LY +NN++ L + L L++F M N T
Sbjct: 439 PFGITRLKNLRELYLDNNQLAKLPPNMGALLNLKIFTMKRNGFT 482
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ + V NNL +L S+ L + ++ + N++ L +L L++L+ L I N L
Sbjct: 332 SLKSIWVRKNNLQTLPKSISQLKKIERIYASQNQISLLPVELAELTQLKSLAISGNLLTE 391
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+PS++ +L L A+ N+ITSL + L L++ + N++ + L NL
Sbjct: 392 IPSELWGLEELYYLDASRNQITSLPNKISDLRSLRILVLSHNRLRTLPFG-ITRLKNLRE 450
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L NNQ+ + ++ L L + N T
Sbjct: 451 LYLDNNQLAKLPPNMGALLNLKIFTMKRNGFT 482
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG---L 147
NN+L L L KL++L + N ++ LP I L L N + L G
Sbjct: 65 GNNQLTVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVR 124
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
LR LT+L + N ++ + L + NQ+ + +S S L KL L L
Sbjct: 125 LRNLTQLNIANNKVKELP----ENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLG 180
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQL L K L+++D+S N++ K
Sbjct: 181 KNQLESVSLGKY---KNLQSLDISRNRLTKI 208
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
D+N LF +N L+ L SK+Q L + +L+ +P +I L L L NN++T
Sbjct: 17 DINRLFYSN-----LDQALQNKSKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGNNQLTV 71
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+L L KL++ + N I + + +L +L+ + +Q N + + + L L
Sbjct: 72 FPKVLFQLKKLKILRLYNNNIKHLPQG-IDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQ 130
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +++N++ E L ++I LK++R + N++ +
Sbjct: 131 LNIANNKVKE-LPENIGKLKKMRVFEAYGNQLKQL 164
>gi|158259127|dbj|BAF85522.1| unnamed protein product [Homo sapiens]
Length = 582
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQELVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQELVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|418728081|ref|ZP_13286661.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410777126|gb|EKR57094.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 240
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 7/159 (4%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L L +R L +L LFLN N+L + ++ L L L + +NQL LP +I
Sbjct: 80 NQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSENQLMTLPKEIGQLE 139
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L LY N N++T++ + L LQV + +NQ + EF L NL ++L NQ+T
Sbjct: 140 KLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPV-EFGQLKNLQELNLDANQLT 198
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
++ + L L LYL +NQ + I KR+R +
Sbjct: 199 TIPKEIGQLQNLQILYLRNNQFS------IEEKKRIRKL 231
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N LT+ + L L+ L+L+ N+L +L ++G L KLQ L + NQL +
Sbjct: 95 LQELFLNYNQLTTFPKEIEQLKSLHKLYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTI 154
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L L+ + N+ ++ L LQ N+D NQ+T + + E L NL +
Sbjct: 155 PNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPK-EIGQLQNLQIL 213
Query: 182 SLQNNQIT 189
L+NNQ +
Sbjct: 214 YLRNNQFS 221
>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 448
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ + +LT L + L+ L L+L N+L +L ++G L KLQ L + N L L
Sbjct: 280 LRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTL 339
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L +LY N+IT+ + L LQ N+ FNQ+T + + E L NL +
Sbjct: 340 PKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQ-EIGQLQNLQEL 398
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+L+ NQ+ ++ + L KL L L +N + ++ IR L
Sbjct: 399 NLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKL 439
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P R L++ + L +L+ + L +L L+LN N+L +L ++G L L
Sbjct: 39 NLTEALQN--PKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q+L + N+L LP +I L L NR+T L + L LQV N+D N++T++
Sbjct: 97 QVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL- 155
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
++ L NL ++L N++T + + L L L NQLT F +I L++L+ +
Sbjct: 156 PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTF-PKEIGQLQKLQEL 214
Query: 229 DLSYNKI 235
+L +N++
Sbjct: 215 NLGFNRL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L LN L L ++G LSKLQ L + NQL LP +I +L
Sbjct: 267 LKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKL 326
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY NN + +L + L KLQ ++ NQIT + E L NL ++L NQ+T++
Sbjct: 327 QELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPK-EIGQLQNLQELNLGFNQLTTL 385
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQL L ++ L++LR ++L N I
Sbjct: 386 PQEIGQLQNLQELNLEFNQLAT-LPKEVGQLQKLRKLNLYNNPI 428
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I ++L++GFN LT+L + L +L L L +N L +L ++G L KLQ
Sbjct: 200 TFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQE 259
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + QL+ LP I L L N +T L + L+KLQ + NQ+T + +
Sbjct: 260 LNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTL-PE 318
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L L + L NN + ++ + L KL LYL NQ+T F +I L+ L+ ++L
Sbjct: 319 EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTF-PKEIGQLQNLQELNL 377
Query: 231 SYNKI 235
+N++
Sbjct: 378 GFNQL 382
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 6/173 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++GFN LT L + + L +L L L+ N+L L ++G L LQ+L ++ N+L L
Sbjct: 119 LQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTIL 178
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P I L L + N++T+ + L KLQ N+ FN++T +R + + QNL LD
Sbjct: 179 PEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILD 238
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
IS N +T++ + L KL L L QL + L I L+ LR ++L+Y
Sbjct: 239 LIS---NPLTTLPKEIGQLQKLQELNLYGIQL-KTLPQGIIQLQNLRGLNLNY 287
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+ + L L L L NRL +L ++ L LQ+L + N L LP +I
Sbjct: 196 NQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI---G 252
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQ---VFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
QL L N L L +G+ +LQ N+++ +T++ + E L L + L N
Sbjct: 253 QLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPK-EIGQLSKLQKLYLYGN 311
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
Q+T++ + L KL LYL +N L L +I L++L+T+ L N+I F
Sbjct: 312 QLTTLPEEIGQLKKLQELYLGNNPL-RTLPKEIEQLQKLQTLYLEGNQITTF 362
>gi|41281398|ref|NP_031399.2| leucine-rich repeat protein SHOC-2 isoform 1 [Homo sapiens]
gi|114632804|ref|XP_521602.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
troglodytes]
gi|149689670|ref|XP_001496623.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Equus caballus]
gi|194042023|ref|XP_001927528.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sus scrofa]
gi|296221216|ref|XP_002756642.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Callithrix
jacchus]
gi|332835019|ref|XP_003312812.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Pan troglodytes]
gi|395828086|ref|XP_003787217.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Otolemur garnettii]
gi|397510493|ref|XP_003825630.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Pan
paniscus]
gi|397510495|ref|XP_003825631.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
paniscus]
gi|426366199|ref|XP_004050149.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Gorilla gorilla
gorilla]
gi|14423936|sp|Q9UQ13.2|SHOC2_HUMAN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|166977684|sp|Q5RAV5.2|SHOC2_PONAB RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|3252979|gb|AAC39856.1| Ras-binding protein SUR-8 [Homo sapiens]
gi|3293320|gb|AAC25698.1| leucine-rich repeat protein SHOC-2 [Homo sapiens]
gi|29792199|gb|AAH50445.1| Soc-2 suppressor of clear homolog (C. elegans) [Homo sapiens]
gi|119569933|gb|EAW49548.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_a [Homo
sapiens]
gi|410217418|gb|JAA05928.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|410217420|gb|JAA05929.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|410267376|gb|JAA21654.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|410302564|gb|JAA29882.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|410333721|gb|JAA35807.1| soc-2 suppressor of clear homolog [Pan troglodytes]
gi|417402990|gb|JAA48322.1| Putative leucine-rich repeat protein shoc-2 [Desmodus rotundus]
gi|431895441|gb|ELK04957.1| Leucine-rich repeat protein SHOC-2 [Pteropus alecto]
Length = 582
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|426226751|ref|XP_004007501.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 3, partial [Ovis aries]
Length = 1073
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 10/207 (4%)
Query: 39 ALITLL-LVNNNITHI---HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
A ITLL L N I I H F ++ L + NN++ L +L L L +L++N+NR
Sbjct: 75 ANITLLSLAGNKIVEILPEHLRQFQ-SLETLDLSGNNISELKTALPPL-QLKYLYINSNR 132
Query: 95 LKSLE-GQLGTL-SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGL 151
+ S+E G L S L +L + +N++ ALP + QL L N N+I ++DGL +GL
Sbjct: 133 VTSMEPGYFDNLASTLLVLKLNRNRISALPPKMFKLPQLQHLELNRNKIKNVDGLTFQGL 192
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQ 210
L+ M N +T + F L N++ + L +N +T + L GL L L+LS N
Sbjct: 193 GALKSLKMQRNGVTRLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNA 252
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ D ++L +DL+YN +++
Sbjct: 253 INRISPDAWEFCQKLSELDLTYNHLSR 279
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++ L + N +T L + + GL+++ L L++N L + +G L L LQ L + QN +
Sbjct: 194 ALKSLKMQRNGVTRLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAI 253
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+ D F Q L L N ++ LD GL+ L ++ N+++ + F+ L
Sbjct: 254 NRISPDAWEFCQKLSELDLTYNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLS 313
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
+L ++ L+NN+I+ MN + SGL KL L L N++ GL L +DLS
Sbjct: 314 SLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSD 373
Query: 233 NKI 235
N I
Sbjct: 374 NAI 376
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 46/83 (55%)
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ N+++ ++ +LH+L + L NN++ ++ + + L L+ N++ E L +
Sbjct: 34 DLSHNRLSFIKASSLSHLHSLREVKLNNNELETIPNLGPVTANITLLSLAGNKIVEILPE 93
Query: 218 DIRGLKRLRTVDLSYNKINKFGT 240
+R + L T+DLS N I++ T
Sbjct: 94 HLRQFQSLETLDLSGNNISELKT 116
>gi|417760913|ref|ZP_12408927.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417775393|ref|ZP_12423246.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418673628|ref|ZP_13234941.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409942907|gb|EKN88510.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410574718|gb|EKQ37747.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410579289|gb|EKQ47137.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 349
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 26 SHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTD 84
S P+ +LK L L L N I+ + ++ + P ++ L++ N + + L +
Sbjct: 102 SLPVEIGNLKN---LEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQN 158
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L WL + N+LK L +LG L L +L + N+L+ LPS F L SL N NR
Sbjct: 159 LEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVF 218
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
L L KL+ + NQ T + +E NL NL+S+ L+ N++ + + L L L
Sbjct: 219 PKELISLKKLETLELTGNQFTFL-PEEIGNLDNLNSLFLEANRLRQLPKGIGKLQNLERL 277
Query: 205 YLSHNQLT 212
YL NQLT
Sbjct: 278 YLQENQLT 285
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP TI KL +G N ++SL + L +L L L++N+L SL ++G L L++L
Sbjct: 57 FPKTITKLRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEIL 116
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ +N++ LP D L L LY + N+ + L L+ + NQ+ + ++
Sbjct: 117 TLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKEL-PEK 175
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL+ + L N++ + SS S L L L++N+ F ++ LK+L T++L+
Sbjct: 176 LGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVF-PKELISLKKLETLELT 234
Query: 232 YNKI 235
N+
Sbjct: 235 GNQF 238
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + +L S + L +L L N LK + L L+ L + +NQ+
Sbjct: 18 PNLVRTLVLDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQI 77
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR--------- 169
+LP +I L L ++N++TSL + L L++ + N+I+++ +
Sbjct: 78 SSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLK 137
Query: 170 -------------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
DE L NL+ + NQ+ + L L L LYL N+L + L
Sbjct: 138 ILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNEL-KVLP 196
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+ L++++L+YN+ F
Sbjct: 197 SSFSEFRSLKSLNLNYNRFQVF 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L L++ LKS ++ L L+ L+ L+ P I L L N+I+SL
Sbjct: 24 LVLDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEE 83
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ L L+ ++ NQ+T + E NL NL+ ++L N+I+ + S L LYLS
Sbjct: 84 IGELQNLKELDLSDNQLTSLPV-EIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLS 142
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
N+ +F D+I L+ L +D S N++ + +
Sbjct: 143 QNKFRKF-PDEILQLQNLEWLDFSENQLKELPEK 175
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N T L + L +LN LFL NRL+ L +G L L+ L +++NQL LP +
Sbjct: 231 LELTGNQFTFLPEEIGNLDNLNSLFLEANRLRQLPKGIGKLQNLERLYLQENQLTTLPEE 290
Query: 125 IQLFSQLGSLY 135
I S L LY
Sbjct: 291 IGSLSNLKGLY 301
>gi|332212811|ref|XP_003255512.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Nomascus
leucogenys]
gi|441600055|ref|XP_004087585.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Nomascus
leucogenys]
Length = 582
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|156120535|ref|NP_001095413.1| leucine-rich repeat protein SHOC-2 [Bos taurus]
gi|426253112|ref|XP_004020244.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Ovis
aries]
gi|166977671|sp|A6QLV3.1|SHOC2_BOVIN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|151553933|gb|AAI48098.1| SHOC2 protein [Bos taurus]
gi|296472607|tpg|DAA14722.1| TPA: leucine-rich repeat protein SHOC-2 [Bos taurus]
gi|440906851|gb|ELR57068.1| Leucine-rich repeat protein SHOC-2 [Bos grunniens mutus]
Length = 582
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|326445296|ref|ZP_08220030.1| hypothetical protein SclaA2_29717 [Streptomyces clavuligerus ATCC
27064]
Length = 235
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDL-NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
+R L +G N LTS+ L L L ++L+L++NRL L LG L++L+ L I +N L
Sbjct: 43 CLRTLDLGHNALTSVPGELGRLAALTDFLYLHHNRLAGLPESLGRLTRLRYLNISENSLT 102
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP I L L A +NR+T+L G + GL++L+ + N + + + L
Sbjct: 103 DLPRSIGTMHGLVELRAQHNRLTALPGTVGGLSRLRELWLRGNALQGLPHST-AGMTQLR 161
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ L+ N +T + L+GL L +L L NQ+T+ L + + L +DL +N +
Sbjct: 162 HLDLRENALTEIPQPLAGLPLLRHLDLRANQVTK-LPGWLASMPSLEKLDLRWNPVEP 218
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N+LT L S+ + L L +NRL +L G +G LS+L+ L + N L+ L
Sbjct: 91 LRYLNISENSLTDLPRSIGTMHGLVELRAQHNRLTALPGTVGGLSRLRELWLRGNALQGL 150
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +QL L N +T + L GL L+ ++ NQ+T + ++ +L+ +
Sbjct: 151 PHSTAGMTQLRHLDLRENALTEIPQPLAGLPLLRHLDLRANQVTKL-PGWLASMPSLEKL 209
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLS 207
L+ N + L L + + L+
Sbjct: 210 DLRWNPVEPAPRLLHDLEQRGCVVLA 235
>gi|383872300|ref|NP_001244517.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
gi|355783099|gb|EHH65020.1| hypothetical protein EGM_18359 [Macaca fascicularis]
gi|380784083|gb|AFE63917.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
gi|383421817|gb|AFH34122.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
gi|384943642|gb|AFI35426.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
Length = 582
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LSKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|197100985|ref|NP_001126707.1| leucine-rich repeat protein SHOC-2 [Pongo abelii]
gi|55732408|emb|CAH92905.1| hypothetical protein [Pongo abelii]
Length = 582
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENALTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENALTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 636
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I R+L++ ++L + L +L +L L N LK + ++G L L+ L
Sbjct: 409 FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEAL 468
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E N+LE LP +I L L + N + + L KLQ ++ NQ T + E
Sbjct: 469 NLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK-E 527
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T+DL
Sbjct: 528 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQTLDLR 586
Query: 232 YNKINKFGT 240
N++ T
Sbjct: 587 NNQLTTLPT 595
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 465 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 524
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 525 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 583
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+ + NK
Sbjct: 584 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKCKIIFENK 636
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+ + L +L L L N+L + ++G L LQ L + +N+L P +I
Sbjct: 145 NKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQ 204
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL +++LQ+NQ+
Sbjct: 205 NLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK-EIGQLQNLQTLNLQDNQLA 263
Query: 190 SMNSSLSGLTKLAYLYLSHNQLT 212
++ + L L LYL +N+LT
Sbjct: 264 TLPVEIGQLQNLQELYLRNNRLT 286
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L NN+ L ++G L LQ L ++ NQL L
Sbjct: 206 LQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 265
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T L + L LQ+ N++T + + E L NL ++
Sbjct: 266 PVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPK-EMGQLKNLQTL 324
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + + L L L L N L+
Sbjct: 325 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 355
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH----VGF--NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L +G N LT+ + L +L L L N+L + ++G L LQ
Sbjct: 149 TFPKEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 208
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L NN+ T L + L LQ N+ NQ+ +
Sbjct: 209 LWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV- 267
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + + L L L N+LT L ++ LK L+T++L
Sbjct: 268 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLKNLQTLNL 326
Query: 231 SYNKI 235
N++
Sbjct: 327 VNNRL 331
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 42 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 101
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-------- 170
P+ I +L SL + NR+ L + L LQ + N++T ++
Sbjct: 102 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQ 161
Query: 171 --------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
E L NL + L N++T+ + L L L+LS N+LT L
Sbjct: 162 DLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTA-LP 220
Query: 217 DDIRGLKRLRTVDLSYNK 234
+I LK L+T+DL N+
Sbjct: 221 KEIGQLKNLQTLDLQNNQ 238
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL L ++G L LQ+L +N+L AL
Sbjct: 252 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAL 311
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T L + L LQ + N +++ R Q L NL
Sbjct: 312 PKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 371
Query: 179 D 179
D
Sbjct: 372 D 372
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 35 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 94
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 95 DLRDNQLATFPAVIVELQKLESLDLSENRLIIL-PNEIGRLQNLQDLGLYKNKLTTFPKE 153
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L L N+LT F +I L+ L+ + L NK+ F
Sbjct: 154 IGRLQNLQDLGLYKNKLTTF-PKEIGRLQNLQDLGLYKNKLTTF 196
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 523 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 582
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 583 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 614
>gi|340724237|ref|XP_003400490.1| PREDICTED: chaoptin-like [Bombus terrestris]
Length = 1257
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 103/178 (57%), Gaps = 7/178 (3%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+L L L NNNI + E + PP I L + N L S +SL+ L L WL+L N KSL
Sbjct: 199 SLAWLNLDNNNIEELLEGSLPPNIHTLSLNSNLLKSFPSSLKSLRHLTWLYLRGNDFKSL 258
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNNRITSLD-GLLRGLTKL 154
E S L+L+ + +N +E + + + L + ++ ++N++TSL G+ GL
Sbjct: 259 ELPDFQSSNLELVDVSENCIEWIGT-LSLTNRTLKIKDFNLDSNKLTSLTAGIFDGLETK 317
Query: 155 QVFNMDFNQITMVRRDEFQNLHN-LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++ ++ N I V D F+ L + L+ ++L+NN ++S+ +++S L KL+YLYL++N +
Sbjct: 318 RI-HLSSNSIKNVDDDAFRGLEDMLEYLNLENNDLSSVPAAVSRLKKLSYLYLANNDI 374
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLT------------- 73
L SD + P L+TL L N IT + +NAF P++R LH+ FN L
Sbjct: 598 LNSDSIMDCPELVTLSLAYNRITKMEKNAFYGLPSLRFLHLEFNKLVMLDLDAIAEIGGP 657
Query: 74 --SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS-----------KLQLLVIEQNQLEA 120
+LN S ++ +N NN L L+ +S +L+ L ++ N +
Sbjct: 658 DFALNVSYNAISTINSGSFTNN-LTRLDLSFNNISHLPADTFYGTPELKSLDLQSNFIVV 716
Query: 121 LPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
L S L +L NN+I SL GL LQ ++ NQIT + ++F+NL NL
Sbjct: 717 LESGTFTLRHLETLNLRNNKIESLRKQSFHGLELLQQLDLSGNQITQLSTEQFRNLKNLR 776
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
++L N+I S+ + TKL L LS N+ T
Sbjct: 777 ILNLSGNKIRSLPRDVFEGTKLEILDLSKNKFT 809
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT-----IRKLHVGFNNLTSLNNSLRGLT 83
L + KG L L L N++T + ++ F I +L F +LR L+
Sbjct: 450 LKDETFKGARKLKELSLSFNHLTELDDDCFVGIEESLDILELSFAFATDVFPQRALRPLS 509
Query: 84 DLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNN 139
+L WL L+NN +++E + +L+ + +E N+L LP I L S +L + N
Sbjct: 510 NLLWLVLDNNNFQTIEATAFYSFQRLRYINLESNRLHYLPERIFLSSVHPELRDVKLGYN 569
Query: 140 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSG 197
+ ++ D LT+L+ ++ N+I ++ D + L ++SL N+IT M + G
Sbjct: 570 FLEAIPDFSFHNLTELRSLDLTGNRIKILNSDSIMDCPELVTLSLAYNRITKMEKNAFYG 629
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLR-TVDLSYNKIN 236
L L +L+L N+L LD I + +++SYN I+
Sbjct: 630 LPSLRFLHLEFNKLVMLDLDAIAEIGGPDFALNVSYNAIS 669
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 102/245 (41%), Gaps = 35/245 (14%)
Query: 1 MSRFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAF-- 58
+RF + L+++ +G L +D L + + L L++N +++I + +F
Sbjct: 69 FARFPDVSVSYVAQLDVVG----SGIQALDNDALTSSVGVEALGLMSNRLSNIGDKSFSG 124
Query: 59 -PPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLG-TLSKLQLLVIEQ 115
++R L + +N L + R L LNWL +++N L SL+G G + L
Sbjct: 125 IADSLRSLDLSYNALEDVPFKVFRDLKKLNWLNMHSNHLTSLDGDWGHSKDALTNAFFGD 184
Query: 116 NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
N + +P F L L +NN I + LL G N+
Sbjct: 185 NSIIEIPKIFNTFESLAWLNLDNNNI---EELLEGSLP-------------------PNI 222
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
H L SL +N + S SSL L L +LYL N L D + L VD+S N I
Sbjct: 223 HTL---SLNSNLLKSFPSSLKSLRHLTWLYLRGNDFKSLELPDFQS-SNLELVDVSENCI 278
Query: 236 NKFGT 240
GT
Sbjct: 279 EWIGT 283
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 63 RKLHVGFNNLTSLNN-SLRGLTD-LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++H+ N++ ++++ + RGL D L +L L NN L S+ + L KL L + N +
Sbjct: 317 KRIHLSSNSIKNVDDDAFRGLEDMLEYLNLENNDLSSVPAAVSRLKKLSYLYLANNDIRN 376
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVF---NMDFNQITMVRRDEFQNLH 176
+ D + +L A + SLD + + +T+ Q N+ +N+I+ ++ +F+
Sbjct: 377 ISGD-AFYEFAENLRALSLATNSLDAVPVAAVTRCQRLLHLNLGYNKISHIQPGDFEWAE 435
Query: 177 NLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR-LRTVDLSY 232
+L+ + L+NN +T + + + G KL L LS N LTE D G++ L ++LS+
Sbjct: 436 DLEILLLRNNILTKLKDETFKGARKLKELSLSFNHLTELDDDCFVGIEESLDILELSF 493
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 33/212 (15%)
Query: 60 PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEG-------QLGTLSKL--Q 109
P +R + +G+N L ++ + S LT+L L L NR+K L +L TLS +
Sbjct: 559 PELRDVKLGYNFLEAIPDFSFHNLTELRSLDLTGNRIKILNSDSIMDCPELVTLSLAYNR 618
Query: 110 LLVIEQNQLEALPS--------------DIQLFSQLG----SLYANNNRITSLDG--LLR 149
+ +E+N LPS D+ +++G +L + N I++++
Sbjct: 619 ITKMEKNAFYGLPSLRFLHLEFNKLVMLDLDAIAEIGGPDFALNVSYNAISTINSGSFTN 678
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
LT+L ++ FN I+ + D F L S+ LQ+N I + S L L L L +N
Sbjct: 679 NLTRL---DLSFNNISHLPADTFYGTPELKSLDLQSNFIVVLESGTFTLRHLETLNLRNN 735
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
++ GL+ L+ +DLS N+I + T
Sbjct: 736 KIESLRKQSFHGLELLQQLDLSGNQITQLSTE 767
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLK 96
L TL L NN I + + +F +++L + N +T L+ R L +L L L+ N+++
Sbjct: 727 LETLNLRNNKIESLRKQSFHGLELLQQLDLSGNQITQLSTEQFRNLKNLRILNLSGNKIR 786
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
SL + +KL++L + +N+ +PS +++ L L +N + LD ++L
Sbjct: 787 SLPRDVFEGTKLEILDLSKNKFTVVPSPSFLEVGYTLRDLNLADNFVDHLDSTAFPTSQL 846
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTE 213
N+ N++T++ + F +L L S+++ N + + L L LYL++ L +
Sbjct: 847 VSLNLAHNRLTILPDNSFVSLGKLLSLNVSQNILQANFKELFHYLPGLRQLYLANCGLRD 906
Query: 214 FLLDDIRGLKRLRTVDLSYNKIN 236
L L L +DLS+N I+
Sbjct: 907 IPL---LPLTNLNVLDLSFNHIH 926
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLG 103
L +N + H+ AFP + L SLN L +NRL L +
Sbjct: 828 LADNFVDHLDSTAFPTS---------QLVSLN-------------LAHNRLTILPDNSFV 865
Query: 104 TLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
+L KL L + QN L+A L LY N + D L LT L V ++ FN
Sbjct: 866 SLGKLLSLNVSQNILQANFKELFHYLPGLRQLYLANCGLR--DIPLLPLTNLNVLDLSFN 923
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
I +FQ L +L + L N+ +TSM N LS L +L +S N + E + G
Sbjct: 924 HIHSTSDKQFQYLKDLKILWLVNDSLTSMPNVKLSLLRELD---VSGNPIEELTKESFLG 980
Query: 222 LKRLRTVDL 230
RL ++L
Sbjct: 981 YPRLEKLNL 989
>gi|431896506|gb|ELK05918.1| Leucine-rich repeat and immunoglobulin-like domains protein 2
[Pteropus alecto]
Length = 1269
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ AF P + L + N ++ + S L +L L+NNR+
Sbjct: 326 ITLLSLVHNIIPDINAEAFQFYPALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITI 385
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L N+I ++GL +GL L
Sbjct: 386 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNKIKVVEGLTFQGLDSL 445
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L N++ + L++N +T +N L GL L LY+S N +
Sbjct: 446 RSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAVER 505
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 506 ISPDAWEFCQRLSELDLSYNQLTRL 530
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 444 SLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAV 503
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 504 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 563
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL +++L+NN+I+ + + +GLT L L L N++ GL+ L +DL+
Sbjct: 564 NLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQGNRIKSITKKAFIGLESLEHLDLNN 623
Query: 233 NKI 235
N I
Sbjct: 624 NAI 626
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 33/211 (15%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
+G +L +L + N I+ + + AF + +L + NNLT +N L GL L L++
Sbjct: 439 FQGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYV 498
Query: 91 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGL 147
+ N ++ + +L L + NQL L S S L L +NR+T + DG+
Sbjct: 499 SQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGV 558
Query: 148 LRGLTKLQVFNMDFNQITMVRRDE---------------------------FQNLHNLDS 180
R L+ LQ N+ N+I+ D F L +L+
Sbjct: 559 FRFLSNLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQGNRIKSITKKAFIGLESLEH 618
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I S+ + T+L L L+ N L
Sbjct: 619 LDLNNNAIMSIQENAFSQTRLKELILNTNSL 649
>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
Length = 1034
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
++L++ +L+ L + + LT L L+LN N+L +L G L+ L L + NQL ALP
Sbjct: 19 KELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALP 78
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ L L NNN+I +L + LT L ++ NQ+ + + F NL +L +
Sbjct: 79 EAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNAL-PEAFGNLTSLTFLD 137
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L +N +T + S+ LT L +LYL++NQL + L D L L +DLS N++N
Sbjct: 138 LNSNPLTGLPDSVGNLTSLKHLYLNNNQL-KALPDSAGNLTSLTFLDLSENQLN 190
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ N L +L +S LT L +L L+ N+L +L G LS L L + NQ+ A
Sbjct: 155 SLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGNQINA 214
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP I + L LY NN++ +L + LT L + NQ+ + + F NL +L
Sbjct: 215 LPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNAL-PETFGNLSSLTD 273
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+ ++ + L+ L YLYL+ NQLT L + I L +L+ + L NK+
Sbjct: 274 LYLSGNQLNALPETFGNLSSLTYLYLNSNQLTG-LPESIGQLNKLKELILYDNKL 327
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++ N L +L + LT L +L LNNN++ +L +G L+ L L + NQL A
Sbjct: 63 SLTHLYLSANQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNA 122
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP + L L N+N +T L + LT L+ ++ NQ+ + D NL +L
Sbjct: 123 LPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKAL-PDSAGNLTSLTF 181
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ L NQ+ ++ + L+ L YLYLS NQ+ L + I L LR + L N++N
Sbjct: 182 LDLSENQLNALPEAFGNLSSLTYLYLSGNQINA-LPESIGNLTNLRYLYLWNNQLN 236
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
NA P +I R L++ N L +L S+ LT+L L+L+ N+L +L G LS L
Sbjct: 213 NALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFGNLSSLT 272
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + NQL ALP S L LY N+N++T L + L KL+ + N++ + +
Sbjct: 273 DLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLTLPQ 332
Query: 170 DEFQNLHNLDSISLQNNQITSM 191
E L L + ++NN + +
Sbjct: 333 -ELTKLTQLKKLDIRNNDLGEL 353
>gi|375364744|ref|NP_001096732.2| leucine-rich repeat-containing protein 40 [Bos taurus]
gi|358411512|ref|XP_003582049.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
gi|359064126|ref|XP_003585940.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
Length = 602
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN++T++ +S S L+ L
Sbjct: 142 ILPEEITNLRNLKGLYLQHNELTCI-PEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLM 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL L ++ G+KRL+ +D + N
Sbjct: 201 RLNLSSNQLKS-LPAELSGMKRLKHLDCNSN 230
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L +P + S L L +NNR+T++ L+ L N
Sbjct: 144 PEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLMRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+ + E + L + +N + ++ L+ + L LYL N+L L +
Sbjct: 204 LSSNQLKSLPA-ELSGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLR--FLPE 260
Query: 219 IRGLKRLRTVDLSYNKINKFGT 240
K L+ + + N+I G
Sbjct: 261 FPSCKLLKELHVGENQIEMLGA 282
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
Query: 45 LVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L NN +T + + +F ++ +L++ N L SL L G+ L L N+N L+++ +L
Sbjct: 181 LSNNRLTTVPASFSFLSSLMRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLETIPPELA 240
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFN 162
++ L+LL + +N+L LP + L L+ N+I L L+ L + V ++ N
Sbjct: 241 SMESLELLYLRRNKLRFLP-EFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDN 299
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++ V DE L +L+ + L NN I+S+ SL G L +L L N L
Sbjct: 300 KLKSVP-DEITLLQSLERLDLSNNDISSLPCSL-GRLHLKFLALEGNPL 346
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L TL KL L + N L +LP +++ + L ++ + NR
Sbjct: 451 VSDVNLSF---NKLSFISLELCTLQKLTFLDLRNNFLSSLPEEMESLTGLQTINLSFNRF 507
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ + + + + NL ++ LQNN + + L L
Sbjct: 508 KILPEVLYRIPTLETILISNNQVGSLDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNL 567
Query: 202 AYLYLSHN 209
L L N
Sbjct: 568 RTLLLDGN 575
>gi|421119264|ref|ZP_15579588.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410347894|gb|EKO98745.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 526
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK++ ++G L
Sbjct: 298 SFPKVILKFRNLRGLNLYDCGF---STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 354
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 355 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 414
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 415 PK-EIGKLENLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQT 472
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 473 LDLRNNQLTTLPT 485
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 355 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 414
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 415 PKEIGKLENLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 473
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
L+NNQ+T++ + + L L +LYL +NQL+ + IR L L+
Sbjct: 474 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 519
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 197
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L N++T++ + L L L L NQ T L +I L+ L+T++L N++ F
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTT-LPKEIGQLQNLQTLNLVNNRLTVF 224
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T + + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + L L L L N L+
Sbjct: 215 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 245
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+ + L +L L+L+ NRL +L ++G L LQ L ++ NQ LP +I
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQ 209
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNLD 179
L +L NNR+T + L LQ + N +++ R Q L NLD
Sbjct: 210 NLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLD 262
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T+L + L LQ N+ N++T+ ++
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKE 227
Query: 171 --EFQNLHNLD 179
+ QNL +L+
Sbjct: 228 IGQLQNLQDLE 238
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 413 TFPKEIGKLENLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 472
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+++
Sbjct: 473 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 504
>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 572
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 8/189 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I R+L++ ++L + L +L +L L N LK++ ++G L L+ L
Sbjct: 345 FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 404
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E N+LE LP +I L L + N + + L KLQ ++ NQ T + E
Sbjct: 405 NLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK-E 463
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T+DL
Sbjct: 464 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFT-VLPKEIGKLKKLQTLDLR 522
Query: 232 YNKINKFGT 240
N++ T
Sbjct: 523 NNQLTTLPT 531
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 73 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTF 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 133 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK-EIGQLQNLQTL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+LQ+NQ+ ++ + L L LYL +N+LT L +I L+ L+T+ N++
Sbjct: 192 NLQDNQLATLPVEIGQLQNLQELYLRNNRLT-VLPKEIGQLQNLQTLCSPENRL 244
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N L ++ + + L +L L L N L+ L ++G L LQ L + QN L+
Sbjct: 378 LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIF 437
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I+ +L L + N+ T+ + L LQ N+ NQ+T + + + QNL LD
Sbjct: 438 PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELD 497
Query: 180 --------------------SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
++ L+NNQ+T++ + + L L +LYL +NQL+ + I
Sbjct: 498 LNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERI 557
Query: 220 RGLKRLRT 227
R L L+
Sbjct: 558 RKLLPLKC 565
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L NN+ L ++G L LQ L ++ NQL L
Sbjct: 142 LQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 201
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T L + L LQ N++T + + E L NL ++
Sbjct: 202 PVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPK-EMGQLKNLQTL 260
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + + L L L L N L+
Sbjct: 261 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 291
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 85 TFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQK 144
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L NN+ T L + L LQ N+ NQ+ +
Sbjct: 145 LWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV- 203
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + + L L L N+LT L ++ LK L+T++L
Sbjct: 204 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTA-LPKEMGQLKNLQTLNL 262
Query: 231 SYNKI 235
N++
Sbjct: 263 VNNRL 267
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL L ++G L LQ L +N+L AL
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTAL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T L + L LQ + N +++ R Q L NL
Sbjct: 248 PKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 307
Query: 179 D 179
D
Sbjct: 308 D 308
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+L ++ L LQ L + NQL P+ I +L SL + NR+ L + L LQ
Sbjct: 62 TLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQE 121
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ N++T + E L NL + L N++T++ + L L L L +NQ T L
Sbjct: 122 LGLYKNKLTTFPK-EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT-ILP 179
Query: 217 DDIRGLKRLRTVDLSYNKI 235
+I L+ L+T++L N++
Sbjct: 180 KEIGQLQNLQTLNLQDNQL 198
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 459 TFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQT 518
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+++
Sbjct: 519 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 550
>gi|260809195|ref|XP_002599392.1| hypothetical protein BRAFLDRAFT_64248 [Branchiostoma floridae]
gi|229284669|gb|EEN55404.1| hypothetical protein BRAFLDRAFT_64248 [Branchiostoma floridae]
Length = 642
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+LH G N L L +S L +L L+L N L++L G L L+ L++++N L+ L
Sbjct: 112 LRELHAGENCLQELPDSFSDLKELRLLYLTGNELRTLPSDFGRLEHLETLMVDENHLKTL 171
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +L A+NN++ +L GL++L++ N+ N+++ + + F +L L +
Sbjct: 172 PKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCL-PESFGDLPQLQEV 230
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
L N ++ + L L LY+ +N L E
Sbjct: 231 ELSGNSLSFLTKDLKSSHCLRKLYVDNNVLKEL 263
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L V N+L +L LT L L N L+ L L +L+LL + N+L L
Sbjct: 89 LRVLSVMGNDLETLPTLFGNLTLLRELHAGENCLQELPDSFSDLKELRLLYLTGNELRTL 148
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PSD L +L + N + +L L +L+ F+ N++ + + F L L +
Sbjct: 149 PSDFGRLEHLETLMVDENHLKTLPKTFGSLRRLERFDASNNKLETL-PESFGGLSRLKIL 207
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+L N+++ + S L +L + LS N L+ FL D++ LR + + N + +
Sbjct: 208 NLSTNKLSCLPESFGDLPQLQEVELSGNSLS-FLTKDLKSSHCLRKLYVDNNVLKEL 263
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL- 118
P ++++ + N+L+ L L+ L L+++NN LK L +G LS +Q L + N+L
Sbjct: 225 PQLQEVELSGNSLSFLTKDLKSSHCLRKLYVDNNVLKELPPWVGHLSLIQELSLRDNKLM 284
Query: 119 -EALPSDIQLFS--QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN- 174
+ LP S L L + N IT+L L L L+ ++ + I + R FQN
Sbjct: 285 NQPLPESFPARSGQTLRLLDLSGNFITALPASLGQLGSLESLHLG-SAIGELERRHFQNG 343
Query: 175 ------------LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
L +L + L NQ+T + S L L +L + N L E
Sbjct: 344 NWLCALPENFGRLRHLKMLHLDENQLTHLPDSFGSLGSLEFLDVGQNWLKEL 395
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLV--------- 112
++ LH+ N LT L +S L L +L + N LK L LS LQLL
Sbjct: 359 LKMLHLDENQLTHLPDSFGSLGSLEFLDVGQNWLKELPDSFCELSNLQLLPSNFGRLSSL 418
Query: 113 ----IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
++ N L LP QL +L N + + G L+ LT + +MD N+ ++
Sbjct: 419 VDLRLDNNMLGELPESFAELRQLRTLDLFCNELREVPGALKHLTGITRLDMDKNKFSL 476
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 80/191 (41%), Gaps = 29/191 (15%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWL-------------FLNNNRLKSLEGQLGTLSK 107
T+R L + N +T+L SL L L L F N N L +L G L
Sbjct: 299 TLRLLDLSGNFITALPASLGQLGSLESLHLGSAIGELERRHFQNGNWLCALPENFGRLRH 358
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L++L +++NQL LP L L N + L L+ LQ+ +F +++
Sbjct: 359 LKMLHLDENQLTHLPDSFGSLGSLEFLDVGQNWLKELPDSFCELSNLQLLPSNFGRLS-- 416
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--LLDDIRGLKRL 225
+L + L NN + + S + L +L L L N+L E L + G+ RL
Sbjct: 417 ---------SLVDLRLDNNMLGELPESFAELRQLRTLDLFCNELREVPGALKHLTGITRL 467
Query: 226 RTVDLSYNKIN 236
D+ NK +
Sbjct: 468 ---DMDKNKFS 475
>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 590
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I R+L++ ++L + L +L +L L N LK + ++G L L+ L
Sbjct: 363 FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEAL 422
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E N+LE LP +I L L + N + + L KLQ ++ NQ T + E
Sbjct: 423 NLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK-E 481
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T+DL
Sbjct: 482 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQTLDLR 540
Query: 232 YNKINKFGT 240
N++ T
Sbjct: 541 NNQLTTLPT 549
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 419 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 478
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 479 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 537
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+ + NK
Sbjct: 538 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKCKIIFENK 590
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 91 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 150
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 151 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK-EIGQLQNLQTL 209
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+LQ+NQ+ ++ + L L LYL +N+LT
Sbjct: 210 NLQDNQLATLPVEIGQLQNLQELYLRNNRLT 240
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L NN+ L ++G L LQ L ++ NQL L
Sbjct: 160 LQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 219
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T L + L LQ+ N++T + + E L NL ++
Sbjct: 220 PVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPK-EMGQLKNLQTL 278
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + + L L L L N L+
Sbjct: 279 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 309
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 103 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 162
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L NN+ T L + L LQ N+ NQ+ +
Sbjct: 163 LWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV- 221
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + + L L L N+LT L ++ LK L+T++L
Sbjct: 222 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLKNLQTLNL 280
Query: 231 SYNKI 235
N++
Sbjct: 281 VNNRL 285
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 35 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 94
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 95 DLRDNQLATFPAVIVELQKLESLDLSENRLIIL-PNEIGRLQNLQDLGLYKNKLTTFPKE 153
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 154 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQNNQ 192
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 42 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 101
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 102 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 160
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L +NQ T L +I L+ L+T++L N++
Sbjct: 161 QKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT-ILPKEIGQLQNLQTLNLQDNQL 216
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL L ++G L LQ+L +N+L AL
Sbjct: 206 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAL 265
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T L + L LQ + N +++ R Q L NL
Sbjct: 266 PKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 325
Query: 179 D 179
D
Sbjct: 326 D 326
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 477 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 536
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 537 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 568
>gi|284030910|ref|YP_003380841.1| leucine-rich repeat-containing protein [Kribbella flavida DSM
17836]
gi|283810203|gb|ADB32042.1| leucine-rich repeat protein [Kribbella flavida DSM 17836]
Length = 244
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 23/198 (11%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +++G LT L+ +LR T L L+L+ NRL SL LG ++L++L + L LP
Sbjct: 4 RTVNLGETGLTELDPALREHTGLRELYLHGNRLASLPDWLGDFAELRILDLSHQPLALLP 63
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
S + + L LY ++ +TSL L GLT L N ++ V L NL +
Sbjct: 64 STLGQLASLEFLYVSDLAVTSLPDSLGGLTSLLYLGATDNGLSEV-PASLGGLRNLVELR 122
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHN----------QLTEFLLDDIRG----------- 221
+ NQ T++ + GL+ L L+L N QLTE + +RG
Sbjct: 123 VYGNQFTTLPTEYGGLSALRELHLDRNPLTGLPGTFDQLTELRVVSLRGAALTEFPVALS 182
Query: 222 -LKRLRTVDLSYNKINKF 238
L +LR +DL N+I +
Sbjct: 183 RLPQLRQLDLRANRITRL 200
>gi|456984028|gb|EMG20190.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 229
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 8/189 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I R+L++ ++L + L +L +L L N LK++ ++G L L+ L
Sbjct: 2 FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 61
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E N+LE LP +I L L + N + + L KLQ ++ NQ T + E
Sbjct: 62 NLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK-E 120
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T+DL
Sbjct: 121 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFT-VLPKEIGKLKKLQTLDLR 179
Query: 232 YNKINKFGT 240
N++ T
Sbjct: 180 NNQLTTLPT 188
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N L ++ + + L +L L L N L+ L ++G L LQ L + QN L+
Sbjct: 35 LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIF 94
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I+ +L L + N+ T+ + L LQ N+ NQ+T + + + QNL LD
Sbjct: 95 PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELD 154
Query: 180 --------------------SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
++ L+NNQ+T++ + + L L +LYL +NQL+ + I
Sbjct: 155 LNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERI 214
Query: 220 RGLKRLRT 227
R L L+
Sbjct: 215 RKLLPLKC 222
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 116 TFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQT 175
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+++
Sbjct: 176 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 207
>gi|61557121|ref|NP_001013173.1| leucine-rich repeat protein SHOC-2 [Rattus norvegicus]
gi|81910889|sp|Q6AYI5.1|SHOC2_RAT RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|50925627|gb|AAH79032.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Rattus
norvegicus]
gi|149040408|gb|EDL94446.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
[Rattus norvegicus]
Length = 582
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L ++S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKD-VRNLPRLSTLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP++++L ++ N L SL + L +L L L+ N L SL L L KL++L
Sbjct: 115 LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRML 174
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N+L +PS + L +LY NRIT+++ +R L +L ++ N+I + E
Sbjct: 175 DLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPA-E 233
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL ++ + +NQ+ + + T++ L L HN+L + L D I L L + L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLNRLGLR 292
Query: 232 YNKINKF 238
YN+++
Sbjct: 293 YNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ +R L L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ LN L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 37/237 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLN 86
D++ P L TL + N I + P I +L V N L L + T +
Sbjct: 210 DVRNLPRLSTLSIRENKIKQL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G LS L L + N+L A+P + S L L NN I++L +
Sbjct: 265 NLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPE 324
Query: 146 GLLRGLTKL----------QVF--------------NMDFNQITMVRRDEFQNLHNLDSI 181
LL L KL Q++ NM+ N+I + F L +
Sbjct: 325 SLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKL 384
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL L + LS N + K
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|403259517|ref|XP_003922256.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Saimiri boliviensis
boliviensis]
Length = 582
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSRLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L++L + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSRLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLNRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSRLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ LN L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|260786749|ref|XP_002588419.1| hypothetical protein BRAFLDRAFT_63368 [Branchiostoma floridae]
gi|229273581|gb|EEN44430.1| hypothetical protein BRAFLDRAFT_63368 [Branchiostoma floridae]
Length = 698
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 10/209 (4%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
L L LVNN IT I AF P + KL++ N +T + L T+L F +S
Sbjct: 98 LEVLWLVNNKITTIQPGAFRCLPRLEKLYLRHNKITLI--QLGVFTNLPHKFDLKGITQS 155
Query: 98 LEGQLGT---LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-GLLRGLT 152
Q GT L++L+ L + N++ + P QL L +N+I+ + G L LT
Sbjct: 156 SSIQSGTSANLTRLRELYLSHNRIALIQPDAFANLPQLEVLCLRDNKISMIQPGTLANLT 215
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQL 211
+L+ ++ N+ITM+ F NL L +SL NQIT + + + + L +L L L HNQ+
Sbjct: 216 RLKELSLRRNKITMLEPGAFTNLPQLQDLSLAYNQITVIEAGTFANLPQLQMLDLCHNQI 275
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
T L +L +DL +N+I KF T
Sbjct: 276 TMIQAGAFANLPQLEMLDLCHNQITKFPT 304
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Query: 62 IRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLE 119
+R+L++ N + + ++ L L L L +N++ ++ G L L++L+ L + +N++
Sbjct: 169 LRELYLSHNRIALIQPDAFANLPQLEVLCLRDNKISMIQPGTLANLTRLKELSLRRNKIT 228
Query: 120 AL-PSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L P QL L N+IT ++ G L +LQ+ ++ NQITM++ F NL
Sbjct: 229 MLEPGAFTNLPQLQDLSLAYNQITVIEAGTFANLPQLQMLDLCHNQITMIQAGAFANLPQ 288
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L+ + L +NQIT + S LA L+L NQ+T + L +L+ +DL NK++
Sbjct: 289 LEMLDLCHNQITKFPTCTSEFANLARLHLCSNQITNIHSGALSNLSKLQLLDLRSNKMS 347
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 11/161 (6%)
Query: 83 TDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANN 138
T + L L N + S++ G L++LQLL + +NQLE + S FS L +L + N
Sbjct: 48 TSICVLDLRANPINSIQPGAFANLTRLQLLDMSKNQLEVIQSGT--FSNLTNLEVLWLVN 105
Query: 139 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNL-HNLDSISLQNNQITSMNSSLS 196
N+IT++ G R L +L+ + N+IT+++ F NL H D + Q +S+ S S
Sbjct: 106 NKITTIQPGAFRCLPRLEKLYLRHNKITLIQLGVFTNLPHKFDLKGI--TQSSSIQSGTS 163
Query: 197 G-LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
LT+L LYLSHN++ D L +L + L NKI+
Sbjct: 164 ANLTRLRELYLSHNRIALIQPDAFANLPQLEVLCLRDNKIS 204
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 43 LLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLE 99
L L N IT + AF P ++ L + +N +T + + L L L L +N++ ++
Sbjct: 220 LSLRRNKITMLEPGAFTNLPQLQDLSLAYNQITVIEAGTFANLPQLQMLDLCHNQITMIQ 279
Query: 100 -GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G L +L++L + NQ+ P+ F+ L L+
Sbjct: 280 AGAFANLPQLEMLDLCHNQITKFPTCTSEFANLARLH----------------------- 316
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
+ NQIT + NL L + L++N+++++ S+ G
Sbjct: 317 LCSNQITNIHSGALSNLSKLQLLDLRSNKMSTIPPSVFGF 356
>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
kowalevskii]
Length = 1112
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L+ N +T L S+ GL DL +++ N L S+ +G L +L+ L I +N L +LP
Sbjct: 432 RLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPD 491
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L +L+A+NN++TS+ + L +LQ +D N +T + + + L ++ +
Sbjct: 492 SVGDLTNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTN-IGKISWLKTLCV 550
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NN +T++ + L L L++++NQL++ L + IR LK L T+ +S N +
Sbjct: 551 NNNSLTTLPDRIGNLHTLEKLHVANNQLSQ-LPESIRKLKNLTTLVVSKNAL 601
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N + L S+ L L L +N+NRL SL G + L L L +E+N L+ LP+ I
Sbjct: 62 NRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTLPNSICNLQ 121
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
QL LY NNN+I+ L + L L+ F + N + + D +L+ L N+++
Sbjct: 122 QLERLYLNNNQISHLPECIGKLRNLETFLISKNSLVSI-PDSIGDLNKLQDFQAHRNKLS 180
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
S+ S+ L L L++S N LT + D I L +L+ + L N ++ R
Sbjct: 181 SLPESIGKLQNLTKLWVSRNSLTS-IPDSICDLNKLQDLRLHTNNLSYLPDR 231
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 28/200 (14%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RKL + N+LT L +S+ L L L L+ N+L SL Q+G L ++ L I N ++ L
Sbjct: 266 LRKLRMSSNSLTRLPHSICDLNKLEDLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKIL 325
Query: 122 PSDIQLFSQLGSLYANNNRITSL--------------------------DGLLRGLTKLQ 155
P I QL LYA+ N+I+ L +G +R +++Q
Sbjct: 326 PDSIGDLQQLTRLYAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQ 385
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
+ N ++ + D +LH L +S+ N S+ SS+ LT L LY NQ+T L
Sbjct: 386 DLQLHKNSLSYLPED-IGSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQIT-LL 443
Query: 216 LDDIRGLKRLRTVDLSYNKI 235
+ I GL+ L+T+ + N +
Sbjct: 444 PESIGGLQDLKTMWVQENSL 463
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L L SL LT+L L NN L +L G LSKL+ L I N++++LP
Sbjct: 874 LNINNNKLKCLPESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPES 933
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF----------NMDFNQ------ITMVR 168
I L L ANNN I+ L +R L KL N F++ IT+
Sbjct: 934 IGKLENLTQLCANNNSISELPD-IRKLKKLTALYLGNNNKTRPNSKFSECISNLPITLKT 992
Query: 169 RDEFQN-----------LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
F N L NL+ + +Q N++ S+ + L L L++ +N L L
Sbjct: 993 LWMFGNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWVHNNLLKS--LP 1050
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
DI LK+L+ + L+ NK+ K
Sbjct: 1051 DISSLKQLQDLSLTDNKLEKL 1071
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 104/202 (51%), Gaps = 7/202 (3%)
Query: 48 NNITHIHENAFP-PTIRKLHVGFNNLTSL---NNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
N I+H+ E+ + + + + N+L ++ N ++R + + L L+ N L L +G
Sbjct: 343 NQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIG 402
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
+L L+ L + N ++LPS I + L LYA++N+IT L + GL L+ + N
Sbjct: 403 SLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENS 462
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+ + + +LH L+ + + N ++S+ S+ LT L L+ S+N+LT + D + L
Sbjct: 463 LVSIPHN-IGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTS-IPDSVCELH 520
Query: 224 RLRTVDLSYNKINKFGTRNEGK 245
L+ + L N + F N GK
Sbjct: 521 ELQHLQLDTNSLT-FLPTNIGK 541
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 42 TLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
+L+ + +NI H+H+ + L + NNL+SL +S+ LT+L L+ +NN+L S+
Sbjct: 462 SLVSIPHNIGHLHQ------LEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTSIPDS 515
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFN 158
+ L +LQ L ++ N L LP++I S L +L NNN +T+L G L L KL V N
Sbjct: 516 VCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNLHTLEKLHVAN 575
Query: 159 MDFNQI------------------TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+Q+ +V LH L+ +NN++ S+ + L
Sbjct: 576 NQLSQLPESIRKLKNLTTLVVSKNALVSMPNMSYLHKLEQFRFENNELQSLPRGIDTLRH 635
Query: 201 L 201
L
Sbjct: 636 L 636
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP+I R LH+ N LTSL S+ L +L+ L L N LK+L + L +L+ L
Sbjct: 67 LPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTLPNSICNLQQLERL 126
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQ+ LP I L + + N + S+ + L KLQ F N+++ + +
Sbjct: 127 YLNNNQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDFQAHRNKLSSL-PES 185
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
L NL + + N +TS+ S+ L KL L L N L+ +L D I
Sbjct: 186 IGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLS-YLPDRI 232
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+RK+ + N LT+L + L +L +NNN+LK L L L+ L+ L+ + N+L+ L
Sbjct: 848 VRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNELDTL 907
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P + S+L L +NN++ SL G L LT+L N +++ +R+ L L
Sbjct: 908 PDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELPDIRK-----LKKL 962
Query: 179 DSISLQNNQITSMNSSLSGLTK-----LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
++ L NN T NS S L L++ N LT L + I L+ L + + N
Sbjct: 963 TALYLGNNNKTRPNSKFSECISNLPITLKTLWMFGNSLTS-LPESISTLRNLEELMIQEN 1021
Query: 234 KI 235
K+
Sbjct: 1022 KL 1023
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L TL NN +T I P ++ +LH + N+LT L ++ ++ L L +NNN
Sbjct: 499 LTTLWASNNKLTSI-----PDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNN 553
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
L +L ++G L L+ L + NQL LP I+ L +L + N + S+ + L K
Sbjct: 554 SLTTLPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALVSMPN-MSYLHK 612
Query: 154 LQVFNMDFNQITMVRR--DEFQNLHNL 178
L+ F + N++ + R D ++LH +
Sbjct: 613 LEQFRFENNELQSLPRGIDTLRHLHTI 639
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
E L +++ + ++ N L LP DI +L L NNN++ L L LT L+
Sbjct: 839 EKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLL 898
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
N++ + D F L L+ +++ NN++ S+ S+ L L L ++N ++E L D
Sbjct: 899 AKNNELDTL-PDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISE--LPD 955
Query: 219 IRGLKRLRTVDLSYN 233
IR LK+L + L N
Sbjct: 956 IRKLKKLTALYLGNN 970
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 28/134 (20%)
Query: 33 DLKGTPALITLLLVNNNITHIHE------NAFPPTIRKLHVGFNNLTSLNNSLRGLTDLN 86
D++ L L L NNN T + + P T++ L + N+LTSL S+ L +L
Sbjct: 955 DIRKLKKLTALYLGNNNKTRPNSKFSECISNLPITLKTLWMFGNSLTSLPESISTLRNLE 1014
Query: 87 WLFLNNNRLKSLE---GQLGTLSKL-------------------QLLVIEQNQLEALPSD 124
L + N+L+SL G+LG+L+KL Q L + N+LE LP
Sbjct: 1015 ELMIQENKLESLPDEIGKLGSLTKLWVHNNLLKSLPDISSLKQLQDLSLTDNKLEKLPEG 1074
Query: 125 IQLFSQLGSLYANN 138
I L S+ N+
Sbjct: 1075 IGNLKSLRSIRFND 1088
>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 465
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N L +L + L +L L L +N+ ++L Q+ L LQ L + NQL L
Sbjct: 247 LEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVL 306
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY +N++T+L + L KL+ ++ NQ+ ++ +E L L +
Sbjct: 307 PQEIGKLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLL-PEEIGKLEKLKYL 365
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NNQ+ + + L KL YL LS+NQL L +I L++L +DLS N F
Sbjct: 366 DLSNNQLRLLPQKIGKLEKLKYLDLSNNQLA-TLPKEIGKLEKLEDLDLSGNPFTTF 421
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++G N L +L + L DL L L+ ++LK+ ++G L L+ L+++ NQL L
Sbjct: 155 LKRLYLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVL 214
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR-----DEFQNLH 176
+I L L NN++ +L + L L+ N+ NQ+ + + + QNLH
Sbjct: 215 SQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLH 274
Query: 177 -----------------NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
NL + L +NQ+T + + L KL LYL NQLT L +I
Sbjct: 275 LYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLT-TLPKEI 333
Query: 220 RGLKRLRTVDLSYNKI 235
L++L+ +DL+ N++
Sbjct: 334 WKLEKLKYLDLANNQL 349
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L++ N L +L N + L +L L L NNRL++L ++GTL L+ L +E NQL L
Sbjct: 63 LRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATL 122
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I L L +NNR+ SL + L KL+ + NQ+ + + E + L +L+ +
Sbjct: 123 PNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQ-EIETLQDLEEL 181
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +Q+ + + L L L L NQL L +I L+ L + L N++
Sbjct: 182 HLSRDQLKTFPEEIGKLRSLKRLILDSNQLV-VLSQEIGKLRSLERLILENNQL 234
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P ++ LH+ + L +L+ + L +L L L NN+L +L ++G L LQ+L + N+L
Sbjct: 37 PMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRL 96
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP ++ L L NN++ +L + L LQV N+ N++ + + E L L
Sbjct: 97 RTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPK-EIGKLQKL 155
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL--LDDIRGLKRL 225
+ L NQ+ ++ + L L L+LS +QL F + +R LKRL
Sbjct: 156 KRLYLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRL 204
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L+ +L+ D+ L LN ++L++L ++GTL L+ L +E NQL LP++I L L
Sbjct: 30 LDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVL 89
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
NNR+ +L + L L+ N++ NQ+ + Q L NL ++L NN++ S+
Sbjct: 90 SLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQ-LENLQVLNLHNNRLKSLPKE 148
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L KL LYL NQL L +I L+ L + LS +++ F
Sbjct: 149 IGKLQKLKRLYLGGNQL-RTLPQEIETLQDLEELHLSRDQLKTF 191
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 52 HIHENAF---PPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
H++ N F P I + LH+ N LT L + L L L+L +N+L +L ++
Sbjct: 274 HLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEI 333
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
L KL+ L + NQL LP +I +L L +NN++ L + L KL+ ++ N
Sbjct: 334 WKLEKLKYLDLANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNN 393
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
Q+ + + E L L+ + L N T+ + G
Sbjct: 394 QLATLPK-EIGKLEKLEDLDLSGNPFTTFPKEIVG 427
>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 595
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I R+L++ ++L + L +L +L L N LK + ++G L L+ L
Sbjct: 368 FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEAL 427
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E N+LE LP +I L L + N + + L KLQ ++ NQ T + E
Sbjct: 428 NLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK-E 486
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T+DL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQTLDLR 545
Query: 232 YNKINKFGT 240
N++ T
Sbjct: 546 NNQLTTLPT 554
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 542
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+ + NK
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKCKIIFENK 595
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+LQ+NQ+ ++ + L L LYL +N+LT
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLT 245
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L NN+ L ++G L LQ L ++ NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T L + L LQ+ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPK-EMGQLKNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + + L L L L N L+
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L NN+ T L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + + L L L N+LT L ++ LK L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLKNLQTLNL 285
Query: 231 SYNKI 235
N++
Sbjct: 286 VNNRL 290
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIIL-PNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQNNQ 197
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L +NQ T L +I L+ L+T++L N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT-ILPKEIGQLQNLQTLNLQDNQL 221
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL L ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T L + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573
>gi|55728731|emb|CAH91105.1| hypothetical protein [Pongo abelii]
Length = 582
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I + L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDIQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L D+ L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDIQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|113677869|ref|NP_001038251.1| leucine-rich repeat protein SHOC-2 [Danio rerio]
gi|123888175|sp|Q1L8Y7.1|SHOC2_DANRE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|94732359|emb|CAK04058.1| novel protein similar to vertebrate soc-2 suppressor of clear
homolog (C. elegans) (SHOC2) [Danio rerio]
gi|161611878|gb|AAI55580.1| Si:ch211-197i12.3 [Danio rerio]
Length = 561
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +S++ LT L L+L +N+L+SL ++G LS L L + +N L +LP + +L L
Sbjct: 94 LPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRML 153
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ ++ L + FN+IT V +D +NL L +S++ N+I + +
Sbjct: 154 DLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAE 212
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L L L ++HNQL E L +I ++ +DL +N
Sbjct: 213 IGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHN 250
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L+ L L L+ N L SL L L KL++L + N+L +P+
Sbjct: 106 ELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPA 165
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ S L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 166 VVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDV 224
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN L + L + I L + + L YN+++
Sbjct: 225 AHNQLEHLPKEIGNCTQITNLDLQHNDLLD-LPETIGNLASINRLGLRYNRLSAI 278
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L +G L KL+ L +E+N+LE+
Sbjct: 382 SMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLES 441
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N + + +E L NL+
Sbjct: 442 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENLLQHL-PEEIGTLENLED 500
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 501 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 542
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE LP +
Sbjct: 176 LYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 235
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L + + +N+++ + R L+ ++L+
Sbjct: 236 IGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRS-LAKCRELEELNLE 294
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+ + LS L L L L+ N + + + ++++ +N+INK FG
Sbjct: 295 NNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 354
Query: 242 NEGK 245
+ K
Sbjct: 355 SRAK 358
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N+L L ++ L +N L L NRL ++
Sbjct: 219 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAI 278
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
EG L +L L L + +N ++ P FS + S
Sbjct: 279 PRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYS 338
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 339 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 397
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ GL L L LS+N L + L I L++LR +DL NK+
Sbjct: 398 EDICGLVSLEMLTLSNNLLKK-LPYGIGNLRKLRELDLEENKL 439
>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 595
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I R+L++ ++L + L +L +L L N LK + ++G L L+ L
Sbjct: 368 FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEAL 427
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E N+LE LP +I L L + N + + L KLQ ++ NQ T + E
Sbjct: 428 NLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK-E 486
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T+DL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQTLDLR 545
Query: 232 YNKINKFGT 240
N++ T
Sbjct: 546 NNQLTTLPT 554
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+LQ+NQ+ ++ + L L LYL +N+LT L +I L+ L+T+ N++
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLT-VLPKEIGQLQNLQTLCSPENRL 267
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 542
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+ + NK
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKCKIIFENK 595
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L NN+ L ++G L LQ L ++ NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T L + L LQ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPK-EMGQLKNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + + L L L L N L+
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L NN+ T L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + + L L L N+LT L ++ LK L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTA-LPKEMGQLKNLQTLNL 285
Query: 231 SYNKI 235
N++
Sbjct: 286 VNNRL 290
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIIL-PNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQNNQ 197
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L +NQ T L +I L+ L+T++L N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT-ILPKEIGQLQNLQTLNLQDNQL 221
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL L ++G L LQ L +N+L AL
Sbjct: 211 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T L + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573
>gi|410033495|ref|XP_001162154.3| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2-like, partial [Pan troglodytes]
Length = 312
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 7/204 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F P + L + N ++ + S L +L L+NNR+ +
Sbjct: 20 ITLLSLVHNIIPEINAQALQFYPALGSLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITT 79
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 80 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 139
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 140 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLQMLQQLYVSQNAIER 199
Query: 214 FLLDDIRGLKRLRTVDLSYNKINK 237
D +RL +DLSYN++ +
Sbjct: 200 ISPDAWEFCQRLSELDLSYNQLTR 223
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 138 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLQMLQQLYVSQNAI 197
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 198 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 257
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQL 211
NL ++ L+NN+I+ N + +GLT L L L++N +
Sbjct: 258 NLQTLDLRNNEISWAIEDANEAFAGLTSLTKLDLNNNAI 296
>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 595
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I R+L++ ++L + L +L +L L N LK + ++G L L+ L
Sbjct: 368 FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEAL 427
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E N+LE LP +I L L + N + + L KLQ ++ NQ T + E
Sbjct: 428 NLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK-E 486
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T+DL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQTLDLR 545
Query: 232 YNKINKFGT 240
N++ T
Sbjct: 546 NNQLTTLPT 554
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+LQ+NQ+ ++ + L L LYL +N+LT
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLT 245
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 542
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L NN+ L ++G L LQ L ++ NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T L + L LQ+ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPK-EMGQLKNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + + L L L L N L+
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L NN+ T L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + + L L L N+LT L ++ LK L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLKNLQTLNL 285
Query: 231 SYNKI 235
N++
Sbjct: 286 VNNRL 290
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIIL-PNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQNNQ 197
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L +NQ T L +I L+ L+T++L N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT-ILPKEIGQLQNLQTLNLQDNQL 221
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL L ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T L + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573
>gi|418702265|ref|ZP_13263176.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418717513|ref|ZP_13277175.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|421116459|ref|ZP_15576844.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|421125803|ref|ZP_15586047.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136751|ref|ZP_15596848.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410011919|gb|EKO70025.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410018933|gb|EKO85761.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410436455|gb|EKP85567.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410758784|gb|EKR25010.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410787110|gb|EKR80845.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|455790756|gb|EMF42603.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 315
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 46 VNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
V +N+T +N P +R+L + LT+L + L +L L L +NRL +L ++ L
Sbjct: 41 VYHNLTEALQN--PKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQL 98
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
LQ L + NQ LP +I L L N+NR+T+L + KLQ +D NQ+
Sbjct: 99 RNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLA 158
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ + E L NL+ + L N++T++ ++ L L LY+ N+ T F ++I L++L
Sbjct: 159 NLPQ-EITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTF-PEEITQLQKL 216
Query: 226 RTVDLSYNKI 235
+ +DL N++
Sbjct: 217 QGLDLGGNQL 226
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L WL L+NN+L +L ++ L L+LL + N+L LP +I
Sbjct: 132 NRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY NR T+ + L KLQ ++ NQ+T + + E L NL ++ L NQ+
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPK-EIGRLQNLKALHLGGNQLA 250
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++ L L L LS NQLT L +I L+ L+T+ L N I
Sbjct: 251 ILPEEITQLQNLQTLILSGNQLTT-LPKEIGRLQNLQTLILKGNPI 295
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L N +T + E A ++++L+V N T+ + L L L L N+L +L +
Sbjct: 173 LFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKE 232
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L L+ L + NQL LP +I L +L + N++T+L + L LQ +
Sbjct: 233 IGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKG 292
Query: 162 NQITMVRRDEFQNL 175
N I R Q L
Sbjct: 293 NPIVSKERQRIQQL 306
>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 595
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I R+L++ ++L + L +L +L L N LK + ++G L L+ L
Sbjct: 368 FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEAL 427
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E N+LE LP +I L L + N + + L KLQ ++ NQ T + E
Sbjct: 428 NLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK-E 486
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T+DL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQTLDLR 545
Query: 232 YNKINKFGT 240
N++ T
Sbjct: 546 NNQLTTLPT 554
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+LQ+NQ+ ++ + L L LYL +N+LT L +I L+ L+T+ N++
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLT-VLPKEIGQLQNLQTLCSPENRL 267
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 542
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L NN+ L ++G L LQ L ++ NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T L + L LQ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPK-EMGQLKNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + + L L L L N L+
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L NN+ T L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + + L L L N+LT L ++ LK L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTA-LPKEMGQLKNLQTLNL 285
Query: 231 SYNKI 235
N++
Sbjct: 286 VNNRL 290
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIIL-PNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQNNQ 197
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L +NQ T L +I L+ L+T++L N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT-ILPKEIGQLQNLQTLNLQDNQL 221
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL L ++G L LQ L +N+L AL
Sbjct: 211 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T L + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573
>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 595
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I R+L++ ++L + L +L +L L N LK + ++G L L+ L
Sbjct: 368 FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEAL 427
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+E N+LE LP +I L L + N + + L KLQ ++ NQ T + E
Sbjct: 428 NLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK-E 486
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T+DL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQTLDLR 545
Query: 232 YNKINKFGT 240
N++ T
Sbjct: 546 NNQLTTLPT 554
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+LQ+NQ+ ++ + L L LYL +N+LT L +I L+ L+ + N++ F
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLT-VLPKEIGQLQNLQMLCSPENRLTAF 270
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 542
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+ + NK
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKCKIIFENK 595
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L NN+ T L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + + L L L N+LT F ++ LK L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAF-PKEMGQLKNLQTLNL 285
Query: 231 SYNKI 235
N++
Sbjct: 286 VNNRL 290
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L NN+ L ++G L LQ L ++ NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T L + L LQ+ N++T + E L NL ++
Sbjct: 225 PVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPK-EMGQLKNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + + L L L L N L+
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIIL-PNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQNNQ 197
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L +NQ T L +I L+ L+T++L N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFT-ILPKEIGQLQNLQTLNLQDNQL 221
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL L ++G L LQ+L +N+L A
Sbjct: 211 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAF 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T L + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573
>gi|332222157|ref|XP_003260233.1| PREDICTED: leucine-rich repeat-containing protein 40 [Nomascus
leucogenys]
Length = 602
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN +T++ +S S L+ L
Sbjct: 142 ILPEEITNLRNLKCLYLQHNELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS N+L L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNELKS-LPAEINRMKRLKHLDCNSN 230
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NN +T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ N++ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 204 LSSNELKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 255
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 31 SDDLKGTPALITLLLVNN------------------NITHIHENAFPPTI------RKLH 66
+DDL+ PAL L + +N N++H P I + L+
Sbjct: 98 TDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLY 157
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N LT ++ L++L L L+NN L ++ +LS L L + N+L++LP++I
Sbjct: 158 LQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEIN 217
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+L L N+N + ++ L G+ L++ + N++ + EF + L + + N
Sbjct: 218 RMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL--PEFPSCSLLKELHVGEN 275
Query: 187 QITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QI + + L L + L L N+L + D+I L+ L +DLS N I+
Sbjct: 276 QIEMLEAEHLKHLNSILVLDLRDNKLKS-VPDEIILLQSLERLDLSNNDISSL 327
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + + L L N+N L+++ +L + L+LL + +N+L LP
Sbjct: 201 RLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP- 259
Query: 124 DIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ S L L+ N+I L+ L+ L + V ++ N++ V DE L +L+ +
Sbjct: 260 EFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLD 318
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NN I+S+ SL L L +L L N L
Sbjct: 319 LSNNDISSLPYSLGNL-HLKFLALEGNPL 346
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 451 VSDVNLSF---NKLSFISVELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRF 507
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 508 KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNL 567
Query: 202 AYLYLSHN 209
L L N
Sbjct: 568 RTLLLDGN 575
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +++ FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 451 VSDVNLSFNKLSFISVELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKML 510
Query: 122 PSDIQLFSQLGSLYANNNRITSLDG----LLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 511 PEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 566
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 567 LRTLLLDGN 575
>gi|421132147|ref|ZP_15592319.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410356394|gb|EKP03731.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 354
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N L ++ + L L L L+ NRL ++ ++G L LQ+L ++ NQ+ +
Sbjct: 111 SLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVS 170
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I+ +L L NNR ++ G L LQ N+ NQ+ + ++ Q L NL
Sbjct: 171 LPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLISIPKEILQ-LQNLRD 229
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQIT + + + L L LYLS NQ T L +I LK LR + L N++
Sbjct: 230 LVLDRNQITILPTEVLQLQNLQELYLSENQFTS-LPKEIDKLKNLRWLSLKNNRL 283
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 56 NAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
NA P I +L + N + SL + GL +L L L NNR K++ G+ L LQ
Sbjct: 146 NAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQ 205
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + +NQL ++P +I L L + N+IT L + L LQ + NQ T + +
Sbjct: 206 KLNLSENQLISIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPK 265
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
E L NL +SL+NN++T++ + L L L L +NQLT L +I LK L+ ++
Sbjct: 266 -EIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTN-LPKEIGQLKNLQRLE 323
Query: 230 LSYN 233
L N
Sbjct: 324 LDSN 327
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + F NLTS + +L L L+ N L L ++ L LQ L + N+L L
Sbjct: 43 VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +L N++ ++ + L L+ N+ N++ V + E L NL +
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPK-EIGQLKNLQIL 161
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQI S+ + GL +L L L +N+ + ++ LK L+ ++LS N++
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQ-LKNLQKLNLSENQL 214
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N +T L + L +L L+L+ N+ SL ++ L L+ L ++ N+L L
Sbjct: 227 LRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTL 286
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
P +I L L NN++T+L + L LQ +D N + +++
Sbjct: 287 PKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPFSPKEKEKV 337
>gi|348685802|gb|EGZ25617.1| hypothetical protein PHYSODRAFT_479275 [Phytophthora sojae]
Length = 1187
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK-------------- 107
+R L++ FN L++L + + +T+L L +N L SL L LS+
Sbjct: 689 LRSLNLSFNALSTLPDGIGAVTNLQELNFKSNALGSLPAALNNLSEIVELNGENNALQWL 748
Query: 108 ----------LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+++L + N+L ALP + L L +L +NNRIT+L L L L+
Sbjct: 749 PTGCGEKWGLMEVLRLSHNRLSALPVTLGLMHSLRTLQLSNNRITALPLELGALIHLREL 808
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ +NQ+T + DE L +L +I L +N++ +++ LT L L SHN L L
Sbjct: 809 DVSWNQLTSIP-DELGCLESLTTIDLSHNRLAKFPITIAMLTSLKRLRCSHNALVTPLDS 867
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+ LK LR VDL+ N++ +
Sbjct: 868 GLGALKSLRYVDLAANQLTEL 888
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L+ N L +L +G ++ LQ L + N L +LP+ + S++ L NN +
Sbjct: 686 LKNLRSLNLSFNALSTLPDGIGAVTNLQELNFKSNALGSLPAALNNLSEIVELNGENNAL 745
Query: 142 TSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
L G ++V + N+++ + +H+L ++ L NN+IT++ L L
Sbjct: 746 QWLPTGCGEKWGLMEVLRLSHNRLSALPVT-LGLMHSLRTLQLSNNRITALPLELGALIH 804
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L +S NQLT + D++ L+ L T+DLS+N++ KF
Sbjct: 805 LRELDVSWNQLTS-IPDELGCLESLTTIDLSHNRLAKF 841
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L++L +L + L L L+NNR+ +L +LG L L+ L + NQL ++P +
Sbjct: 762 LRLSHNRLSALPVTLGLMHSLRTLQLSNNRITALPLELGALIHLRELDVSWNQLTSIPDE 821
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
+ L ++ ++NR+ + LT L+ N + L +L + L
Sbjct: 822 LGCLESLTTIDLSHNRLAKFPITIAMLTSLKRLRCSHNALVTPLDSGLGALKSLRYVDLA 881
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
NQ+T + L L ++ L L N+++ + + LR +DL N
Sbjct: 882 ANQLTELEPCLYELPQVEVLNLHGNRISMLPREMAQHCGALRKLDLYSN 930
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 26/180 (14%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L + N +T+L L L L L ++ N+L S+ +LG L L + + N+L
Sbjct: 781 SLRTLQLSNNRITALPLELGALIHLRELDVSWNQLTSIPDELGCLESLTTIDLSHNRLAK 840
Query: 121 LPSDIQLFSQLGSLYANN------------------------NRITSLDGLLRGLTKLQV 156
P I + + L L ++ N++T L+ L L +++V
Sbjct: 841 FPITIAMLTSLKRLRCSHNALVTPLDSGLGALKSLRYVDLAANQLTELEPCLYELPQVEV 900
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG--LTKLAYLYLSHNQLTEF 214
N+ N+I+M+ R+ Q+ L + L +N + ++ L+ LT+L L + N LT F
Sbjct: 901 LNLHGNRISMLPREMAQHCGALRKLDLYSNNLRALPLELASGLLTQLEVLEIGRNPLTLF 960
>gi|432116060|gb|ELK37190.1| Leucine-rich repeat-containing protein 40 [Myotis davidii]
Length = 561
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 41 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 100
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + + NN +T++ +S S L+ L
Sbjct: 101 ILPEEITNLRNLKGLYLQHNELTSI-PEGFEQLFNLEDLDISNNCLTTVPASFSSLSSLV 159
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
L LS NQL L +I G+KRL+ +D + N + + G
Sbjct: 160 RLNLSSNQLKN-LPAEISGMKRLKHLDCNSNLLESIPSELAG 200
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P + L + N LTSL +++R L +L L +++N+LK L ++ L L+ L ++ N+L
Sbjct: 64 PALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELT 123
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
++P + L L +NN +T++ L+ L N+ NQ+ + E + L
Sbjct: 124 SIPEGFEQLFNLEDLDISNNCLTTVPASFSSLSSLVRLNLSSNQLKNLPA-EISGMKRLK 182
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
+ +N + S+ S L+G+ L LYL N+L L + K L+ + L N+I G
Sbjct: 183 HLDCNSNLLESIPSELAGMESLELLYLRRNKLR--FLPEFPSCKLLKELHLGENQIEMLG 240
Query: 240 T 240
Sbjct: 241 A 241
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L +L + G+ L L N+N L+S+ +L + L+LL + +N+L
Sbjct: 157 SLVRLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESIPSELAGMESLELLYLRRNKLRF 216
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP + L L+ N+I L L+ L + V ++ N++ V DE L +L+
Sbjct: 217 LP-EFPSCKLLKELHLGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLE 274
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I+S+ SL G L +L L N +
Sbjct: 275 RLDLSNNDISSLPYSL-GKLHLKFLALEGNPM 305
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 410 VSDVNLGF---NKLSLISLELCMLQKLSFLDLRNNFLNSLPEEMESLIRLQTINLSFNRF 466
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L ++ L+ + NQ+ V ++ + + NL ++ LQNN + + L L
Sbjct: 467 KILPEVLYRISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIPPELGNCVNL 526
Query: 202 AYLYLSHN 209
L L N
Sbjct: 527 RTLLLDGN 534
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +++GFN L+ ++ L L L++L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 410 VSDVNLGFNKLSLISLELCMLQKLSFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKIL 469
Query: 122 PSDIQLFSQLGSLYANNNRITSLDG----LLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + S L ++ +NN++ S++ ++ L L + N D QI E N N
Sbjct: 470 PEVLYRISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIP----PELGNCVN 525
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 526 LRTLLLDGN 534
>gi|260806466|ref|XP_002598105.1| hypothetical protein BRAFLDRAFT_85677 [Branchiostoma floridae]
gi|229283376|gb|EEN54117.1| hypothetical protein BRAFLDRAFT_85677 [Branchiostoma floridae]
Length = 586
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 62 IRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLE 119
+RKL + FNN++++NN+ LT L+ L L N+LK+L G L L+ L + N L
Sbjct: 75 LRKLSLSFNNISTVNNATFSRLTSLSTLSLEGNQLKNLSAGVFAGLDNLERLNLSGNHLS 134
Query: 120 ALPSDIQLFSQLGS---LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+ P+D FS LG L+ NNN++ SL G+ GL L V N+ N +T + + F L
Sbjct: 135 SFPADT--FSGLGKLQYLHLNNNQLKSLPVGIFEGLRNLTVLNVGSNILTSIPANIFVGL 192
Query: 176 HNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
NL ++ L NN++ + S +GL L L L N+L D + GL L+ + LS N
Sbjct: 193 GNLKNLWLDNNRLKILPSVGFAGLGNLQGLDLHRNELIGLPEDLLVGLHNLQDLFLSQNH 252
Query: 235 INKF 238
I ++
Sbjct: 253 IGRY 256
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRL 95
+L TL L N + ++ F + +L++ N+L+S ++ GL L +L LNNN+L
Sbjct: 98 SLSTLSLEGNQLKNLSAGVFAGLDNLERLNLSGNHLSSFPADTFSGLGKLQYLHLNNNQL 157
Query: 96 KSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLDGL-LRGLT 152
KSL G L L +L + N L ++P++I + L +L+ +NNR+ L + GL
Sbjct: 158 KSLPVGIFEGLRNLTVLNVGSNILTSIPANIFVGLGNLKNLWLDNNRLKILPSVGFAGLG 217
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
LQ ++ N++ + D LHNL + L N I
Sbjct: 218 NLQGLDLHRNELIGLPEDLLVGLHNLQDLFLSQNHI 253
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 25/181 (13%)
Query: 58 FPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQ 115
P I +L +GFN++ +L ++ L ++L L L+ N + ++ L+ L L +E
Sbjct: 47 LPTNITELDLGFNSIKTLGHADLSRYSNLRKLSLSFNNISTVNNATFSRLTSLSTLSLEG 106
Query: 116 NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
NQL+ L + G+ GL L+ N+ N ++ D F L
Sbjct: 107 NQLKNLSA----------------------GVFAGLDNLERLNLSGNHLSSFPADTFSGL 144
Query: 176 HNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L + L NNQ+ S+ + GL L L + N LT + GL L+ + L N+
Sbjct: 145 GKLQYLHLNNNQLKSLPVGIFEGLRNLTVLNVGSNILTSIPANIFVGLGNLKNLWLDNNR 204
Query: 235 I 235
+
Sbjct: 205 L 205
>gi|328950290|ref|YP_004367625.1| hypothetical protein Marky_0765 [Marinithermus hydrothermalis DSM
14884]
gi|328450614|gb|AEB11515.1| hypothetical protein Marky_0765 [Marinithermus hydrothermalis DSM
14884]
Length = 462
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
LV+N IT + A +++LH+G N + SL L GLT L L + NNR+ L L
Sbjct: 113 LVSNRITDLAPLANLTRLKRLHLGNNQVQSLE-PLAGLTQLTELRIGNNRVADL-APLAD 170
Query: 105 LSKLQLLVIEQNQLEALP---------------------SDIQLFSQLGSLYANNNRITS 143
L +L +LV +N + L + + +QL +L+ + N+I
Sbjct: 171 LGRLAVLVAWRNAVTDLQPLANLTRMRVLSLASNRVTDLTPLAELAQLDTLFLSENQIAD 230
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L L GLT+L+V ++DFN+IT + D L L + L NQI + + L+GLT L
Sbjct: 231 L-APLAGLTQLKVLSLDFNRITHL--DPLARLVELTELGLDANQIADL-TPLAGLTNLQV 286
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L S N++ + L + GL RL + L++N+I
Sbjct: 287 LSASENRIAD--LTPLGGLVRLEQLGLNFNRIRDI 319
>gi|320168649|gb|EFW45548.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 977
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 8/215 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP---TIRKLHVGFNNLTSLNNS-LRGLTD 84
L + G P + TL L N I A +++L++ NN++S++ + G
Sbjct: 145 LPTAAFAGLPQMSTLRLSRNQFNSIPSTAITTGLTALKELYLDANNISSISTAAFTGFPA 204
Query: 85 LNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 142
L +L+L +N + + L++L+ L + NQ+ ++ + S L L + N+I+
Sbjct: 205 LTYLYLADNPITDIPANTFADLTELRHLYLRNNQISSVSATAFAGLSALNYLDLSMNKIS 264
Query: 143 SLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 200
SL + GLT L + + NQ++ + F +L L + L +NQ T++ ++ +GL
Sbjct: 265 SLSASVFTGLTALSILYLQSNQLSSIPASSFTDLAALQHLYLSSNQFTNLPAAAFTGLDA 324
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L+LS N LT + L LR +DLS KI
Sbjct: 325 LIVLWLSGNPLTSVPTSALTSLSALRNLDLSSTKI 359
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 34/234 (14%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+++ G PAL L L +N IT I N F +R L++ N ++S++ + GL+ L
Sbjct: 194 ISTAAFTGFPALTYLYLADNPITDIPANTFADLTELRHLYLRNNQISSVSATAFAGLSAL 253
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITS 143
N+L L+ N++ SL + T L+ L +L ++ NQL ++P S + L LY ++N+ T+
Sbjct: 254 NYLDLSMNKISSLSASVFTGLTALSILYLQSNQLSSIPASSFTDLAALQHLYLSSNQFTN 313
Query: 144 L--------DGL-----------------LRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L D L L L+ L+ ++ +IT + + F L+ L
Sbjct: 314 LPAAAFTGLDALIVLWLSGNPLTSVPTSALTSLSALRNLDLSSTKITSISANAFAGLNAL 373
Query: 179 DSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK---RLRTV 228
++L N I S++ S+ +GLT L L+LS+ LT +GL RL T+
Sbjct: 374 TVLALHYNPIASISGSAFTGLTALTALHLSNTPLTTLPPGLFQGLPNGLRLSTI 427
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 65/212 (30%), Positives = 107/212 (50%), Gaps = 9/212 (4%)
Query: 36 GTPALIT-LLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLN 91
G P+ T L L +N IT I NAF + L++ N +TS++ N+ GL+ L +L L
Sbjct: 55 GIPSNTTHLSLQSNQITSISVNAFTGLTALIWLYLTDNQITSISANAFTGLSALTYLVLK 114
Query: 92 NNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL--DGL 147
N + S+ T LS L+ + + N++ LP+ Q+ +L + N+ S+ +
Sbjct: 115 ENEISSISANAFTGLSALKEVDLSNNRIIDLPTAAFAGLPQMSTLRLSRNQFNSIPSTAI 174
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYL 206
GLT L+ +D N I+ + F L + L +N IT + + + + LT+L +LYL
Sbjct: 175 TTGLTALKELYLDANNISSISTAAFTGFPALTYLYLADNPITDIPANTFADLTELRHLYL 234
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ++ GL L +DLS NKI+
Sbjct: 235 RNNQISSVSATAFAGLSALNYLDLSMNKISSL 266
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 8/220 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS--LRGLTD 84
++++ G AL + L NN I + AF P + L + N S+ ++ GLT
Sbjct: 121 ISANAFTGLSALKEVDLSNNRIIDLPTAAFAGLPQMSTLRLSRNQFNSIPSTAITTGLTA 180
Query: 85 LNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRIT 142
L L+L+ N + S+ T L L + N + +P++ ++L LY NN+I+
Sbjct: 181 LKELYLDANNISSISTAAFTGFPALTYLYLADNPITDIPANTFADLTELRHLYLRNNQIS 240
Query: 143 SLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTK 200
S+ GL+ L ++ N+I+ + F L L + LQ+NQ++S+ SS + L
Sbjct: 241 SVSATAFAGLSALNYLDLSMNKISSLSASVFTGLTALSILYLQSNQLSSIPASSFTDLAA 300
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L +LYLS NQ T GL L + LS N + T
Sbjct: 301 LQHLYLSSNQFTNLPAAAFTGLDALIVLWLSGNPLTSVPT 340
>gi|260788664|ref|XP_002589369.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
gi|229274546|gb|EEN45380.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
Length = 869
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + LTS+ + +TDL +L ++ N+L S+ +G L KL L N L LP
Sbjct: 32 KLDLSNQGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQKLSRLDAYSNMLTCLPQ 91
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I +L LY N++ +L + L KL + ++ NQ+T V +L NL+ +S+
Sbjct: 92 AIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSG-VCSLPNLEVLSV 150
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NN++++ + L KL L++ NQLTE + + L L +++S NK++ F
Sbjct: 151 SNNKLSTFPPGVEKLQKLRKLFIKDNQLTE-VPSGVCSLPNLEVLNVSNNKLSTF 204
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 56 NAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ FPP + KL + N LT + + + L +L L NN+L + + L KL+
Sbjct: 262 STFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLR 321
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L I NQL +PS + L L NN++++ + L KL+ + NQ+T V
Sbjct: 322 ELYIYDNQLTEVPSGVCSLPNLEMLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPS 381
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--------------- 214
+L NL+ +S+ NN++++ + L KL LY++ NQLTE
Sbjct: 382 G-VCSLPNLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVCSLPNLEVLSV 440
Query: 215 -------LLDDIRGLKRLRTVDLSYNKINKF 238
L DD+ L RL+T+ + + ++F
Sbjct: 441 GPNPIRRLPDDVTRLARLKTLSVPGCQFDEF 471
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ FPP + R+L++ N LT + + + L +L L + NN+L + + L KL+
Sbjct: 308 STFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLGVYNNKLSTFPPGVEKLQKLR 367
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L I NQL +PS + L L NN++++ + L KL+ ++ NQ+T V
Sbjct: 368 ELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEV-P 426
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+L NL+ +S+ N I + ++ L +L L + Q EF R + +L+T++
Sbjct: 427 SCVCSLPNLEVLSVGPNPIRRLPDDVTRLARLKTLSVPGCQFDEF----PRQVLQLKTLE 482
Query: 230 LSYNKINKF 238
Y KF
Sbjct: 483 ELYAGGCKF 491
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I KL + N LT + + + L +L L ++NN+L + + L KL+ L
Sbjct: 112 LPPGIEKLQKLTLLSIYDNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRKL 171
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD- 170
I+ NQL +PS + L L +NN++++ + L KL+ + NQ+T V
Sbjct: 172 FIKDNQLTEVPSGVCSLPNLEVLNVSNNKLSTFPPGVEKLQKLKELGIYDNQLTEVPSGV 231
Query: 171 ------EFQNLHN------LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
E N++N + NN++++ + L KL L + NQLTE +
Sbjct: 232 CSLPNLEVLNVYNNKLSTFPPGVKCHNNKLSTFPPGVEKLQKLKELGIYDNQLTE-VPSG 290
Query: 219 IRGLKRLRTVDLSYNKINKF 238
+ L L + NK++ F
Sbjct: 291 VCSLPNLEKLSAYNNKLSTF 310
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 12/183 (6%)
Query: 38 PALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NN ++ FPP + RKL++ N LT + + + L +L L +
Sbjct: 387 PNLEMLSVCNNKLS-----TFPPGVEKLQKLRKLYINDNQLTEVPSCVCSLPNLEVLSVG 441
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N ++ L + L++L+ L + Q + P + L LYA + + + L
Sbjct: 442 PNPIRRLPDDVTRLARLKTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGNL 501
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L ++D N + + +LHNL + L N+ + L L + L + +N +
Sbjct: 502 QHLWHLSLDINLLRTL-PSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLNIRNNNI 560
Query: 212 TEF 214
T
Sbjct: 561 TRL 563
>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 402
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ FN LT+ N + L +L L L+ N+L +L +G L LQ+L +E NQL L
Sbjct: 113 LQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTL 172
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+DI +L L N++ +L + L +LQV +++ NQ+T + + E L NL +
Sbjct: 173 PNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPK-EIGELKNLREL 231
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+ ++ + + L L L++ NQL + L +I L+ L+ + L N++
Sbjct: 232 HLYKNQLKTLPNDIGELKNLQVLHIGSNQL-KTLPKEIGELQNLQELYLYTNQL 284
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L +L L L N+LK+L +G L LQ+L I NQL+ LP +I
Sbjct: 213 NQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQ 272
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY N++ +L + L L V ++ N++ + + E L NL + L+NN++
Sbjct: 273 NLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPK-EIGELQNLTVLDLRNNELK 331
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
++ + L L L L +N+L + L ++I LK LR + L
Sbjct: 332 TLPKEIGELQSLTVLDLRNNEL-KTLPNEIGKLKELRKLHL 371
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LT+L N + L +L L L+ N+ +L +G L LQ L + NQL
Sbjct: 67 LRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTF 126
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+DI L L+ + N++T+L + L LQV +++ NQ+T + D L L+ +
Sbjct: 127 PNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPND-IGKLQKLERL 185
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL NQ+ +++ + L +L L L+ NQLT L +I LK LR + L N++
Sbjct: 186 SLIENQLKTLSKEIGYLKELQVLDLNGNQLT-TLPKEIGELKNLRELHLYKNQL 238
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 119 EAL--PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
EAL P+D+++ +N R+T+L + L L++ N+ NQ+T + +E L
Sbjct: 36 EALQNPTDVRILD------LSNKRLTTLPKEIGELQNLRILNLYRNQLTTL-PNEIGKLQ 88
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL ++L NQ T++ + + L L L+LS NQLT F +DI L+ LR + LS N++
Sbjct: 89 NLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTF-PNDIGQLQNLRELHLSVNQL 146
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +L + L +L L L+ N LK+L ++G L L +L + N+L+ L
Sbjct: 274 LQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTL 333
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
P +I L L NN + +L + L +L+ ++D
Sbjct: 334 PKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHLD 372
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+ LH+ N L +L + L +L L L NN LK+L ++G L L +L + N+L+
Sbjct: 298 TVLDLHI--NELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKT 355
Query: 121 LPSDIQLFSQLGSLYANN 138
LP++I +L L+ ++
Sbjct: 356 LPNEIGKLKELRKLHLDD 373
>gi|301773446|ref|XP_002922120.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
[Ailuropoda melanoleuca]
Length = 1629
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N
Sbjct: 132 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNE 184
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 185 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLL 244
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 245 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELVLTENLLTAL 303
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N+L E L +I G L + L N++
Sbjct: 304 PRSLGKLTKLTNLNVDRNRL-EVLPPEIGGCVALSVLSLRDNRL 346
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L++L
Sbjct: 83 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQAL 142
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 143 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELW 202
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 203 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQN-LLQRLPDG 260
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 261 IGQLKQLSILKVDQNRL 277
Score = 50.1 bits (118), Expect = 9e-04, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N+LE LP +
Sbjct: 270 LKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPPE 329
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ +L L +L V ++ N++ R F H NL ++ L
Sbjct: 330 IGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 386
Query: 184 QNNQITSM 191
NQ M
Sbjct: 387 AENQAQPM 394
>gi|332271217|gb|AEE38255.1| toll-like receptor 22 [Salmo salar]
Length = 918
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 117/218 (53%), Gaps = 14/218 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLN 86
L+ + L+ + + L NNNI + +F + L +G N L+S+ ++ R ++ L
Sbjct: 333 LSEEFLQSCKQVTEVDLENNNIIQLSAVSFRSMEQLSTLRLGHNMLSSVPDATRNVSTLK 392
Query: 87 WLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL 144
+L L+ N + L L+ L L + NQ+ LP + + +L L +N+I +L
Sbjct: 393 FLDLSFNIILKLGCSDFANLTGLTQLFLFHNQISNLPGCVFKDLKELRILKLGSNKILTL 452
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLA 202
D + GL KL+ +M +N+++ + + +F+ L ++ ++ L +NQI S+ + + GL LA
Sbjct: 453 NDDFMSGLYKLEYLSMSYNKLSSISKGDFKGLASIKALLLFDNQIASLEDGAFEGLVNLA 512
Query: 203 YLYLSHNQLTEFLLDDIR-----GLKRLRTVDLSYNKI 235
L L N++T+ DIR GL RLRT+D+S N I
Sbjct: 513 ELRLQSNKITQI---DIRKTVLSGLPRLRTLDISCNYI 547
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 6/210 (2%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGF--NNLTSLNN-SLRGLTDLNWLFLNNNR 94
P L L L +NNI+ + E + V NN+ L+ S R + L+ L L +N
Sbjct: 318 PTLSLLRLHHNNISSLSEEFLQSCKQVTEVDLENNNIIQLSAVSFRSMEQLSTLRLGHNM 377
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDG-LLRGLT 152
L S+ +S L+ L + N + L SD + L L+ +N+I++L G + + L
Sbjct: 378 LSSVPDATRNVSTLKFLDLSFNIILKLGCSDFANLTGLTQLFLFHNQISNLPGCVFKDLK 437
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQL 211
+L++ + N+I + D L+ L+ +S+ N+++S++ GL + L L NQ+
Sbjct: 438 ELRILKLGSNKILTLNDDFMSGLYKLEYLSMSYNKLSSISKGDFKGLASIKALLLFDNQI 497
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
GL L + L NKI + R
Sbjct: 498 ASLEDGAFEGLVNLAELRLQSNKITQIDIR 527
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 46 VNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGT 104
VN+++ H+ R +G + +L + + L+ L L++N + SL E L +
Sbjct: 290 VNSSLVHL---------RLYDIGEERVKALTDIACHIPTLSLLRLHHNNISSLSEEFLQS 340
Query: 105 LSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
++ + +E N + L + + QL +L +N ++S+ R ++ L+ ++ FN
Sbjct: 341 CKQVTEVDLENNNIIQLSAVSFRSMEQLSTLRLGHNMLSSVPDATRNVSTLKFLDLSFNI 400
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGL 222
I + +F NL L + L +NQI+++ + L +L L L N++ D + GL
Sbjct: 401 ILKLGCSDFANLTGLTQLFLFHNQISNLPGCVFKDLKELRILKLGSNKILTLNDDFMSGL 460
Query: 223 KRLRTVDLSYNKIN 236
+L + +SYNK++
Sbjct: 461 YKLEYLSMSYNKLS 474
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 38/183 (20%)
Query: 34 LKGTPALITLLLVNNNITHI--HENAFPPTIRKLHVGFNNLTSLNNSL------RGLTDL 85
L G P L TL + N IT++ H+ PP F++LTSL N L +GL L
Sbjct: 531 LSGLPRLRTLDISCNYITYVNDHKGNPPP--------FSHLTSLENLLIFSQRHKGLCHL 582
Query: 86 NWLFLNNNRLKS-LEGQLGTL-------------SKLQLLVIEQNQLEALPSDIQLF--- 128
FL LKS L + G+L +L L I +N+ AL ++LF
Sbjct: 583 PINFLEG--LKSLLSFEAGSLNIKELHPDTFIHTPQLWFLDISKNEFTAL--TLKLFHPI 638
Query: 129 SQLGSLYANNNRITSLDGLLRG-LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
L SLY + R+ SLD L+ L+++ + N IT+V +L L + +Q+N
Sbjct: 639 PSLNSLYLSKARLQSLDFLIGANLSRVTFLQVRKNDITVVNETVLHSLPALTYLDMQDNA 698
Query: 188 ITS 190
T
Sbjct: 699 FTC 701
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN-NRITSLDGL 147
FL N ++ G L +++L +N LE +P +I + + NN ++I D
Sbjct: 40 FLKNCPIR---GNLSDNFNMKVLCYNRN-LEVMPINILWKVSVLDVAMNNISKIGKFD-- 93
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYL 206
+GL+ L++ NM NQI+ V D +L L + L N++T+++ L L L+ L+L
Sbjct: 94 FKGLSNLKILNMFMNQISQVDNDALAHLEALQELYLAYNRLTTLSDHLFQDLANLSLLHL 153
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+N +T + L L+TV+L+ N ++
Sbjct: 154 DNNLITTIGSSSFQLLSSLKTVNLTKNNLH 183
>gi|429961316|gb|ELA40861.1| hypothetical protein VICG_02102 [Vittaforma corneae ATCC 50505]
Length = 418
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
PP I + L++ N L +L +R L L L+L NN+LK L ++G L LQ
Sbjct: 81 TLPPEIGELKDLKMLYLNGNELGTLPPEIRRLEKLQCLYLRNNKLKLLPIEIGELKNLQA 140
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + N+LE LP++I L L N N + +L + L L+ N+ N++ ++
Sbjct: 141 LDLNGNKLETLPAEIGELENLQYLDLNGNELETLPLEIGELKNLRYLNLGNNKLGILSTV 200
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L NL+ + L NN+ + S + L KL LYL N+L + L +I GL+ L+ +DL
Sbjct: 201 -IKKLKNLEILCLSNNEFELLPSEIVELEKLQCLYLHGNKL-KLLPIEIEGLENLQELDL 258
Query: 231 SYNKI 235
+ N++
Sbjct: 259 NGNEL 263
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL + NNL +L + L DL L+LN N L +L ++ L KLQ L + N+L+ L
Sbjct: 69 LEKLDLSVNNLETLPPEIGELKDLKMLYLNGNELGTLPPEIRRLEKLQCLYLRNNKLKLL 128
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N N++ +L + L LQ +++ N++ + E L NL +
Sbjct: 129 PIEIGELKNLQALDLNGNKLETLPAEIGELENLQYLDLNGNELETLPL-EIGELKNLRYL 187
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+L NN++ +++ + L L L LS+N+ E L +I L++L+ + L NK+
Sbjct: 188 NLGNNKLGILSTVIKKLKNLEILCLSNNEF-ELLPSEIVELEKLQCLYLHGNKLKLLPIE 246
Query: 242 NEG 244
EG
Sbjct: 247 IEG 249
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++G N L L+ ++ L +L L L+NN + L ++ L KLQ L + N+L+ L
Sbjct: 184 LRYLNLGNNKLGILSTVIKKLKNLEILCLSNNEFELLPSEIVELEKLQCLYLHGNKLKLL 243
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L L N N + +L ++ L L+ +N++ + E L L +
Sbjct: 244 PIEIEGLENLQELDLNGNELETLPAVIWKLKNLKTLRFGYNKLETLPV-EIVELEKLQFL 302
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++ + + GL L L L+ N+L E L +I LK L+T+ L YNK+
Sbjct: 303 YLHGNKLKLLPIEIEGLENLQELDLNGNEL-ETLPLEIGELKNLKTLRLCYNKL 355
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 58 FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ 117
+P ++ + +TS+++ ++ L L L L+ N L++L ++G L L++L + N+
Sbjct: 42 YPVDTTEIDIYSQGITSIDSDIKRLVKLEKLDLSVNNLETLPPEIGELKDLKMLYLNGNE 101
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L LP +I+ +L LY NN++ L + L LQ +++ N++ + E L N
Sbjct: 102 LGTLPPEIRRLEKLQCLYLRNNKLKLLPIEIGELKNLQALDLNGNKLETLPA-EIGELEN 160
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L + L N++ ++ + L L YL L +N+L L I+ LK L + LS N+
Sbjct: 161 LQYLDLNGNELETLPLEIGELKNLRYLNLGNNKLG-ILSTVIKKLKNLEILCLSNNE 216
>gi|455789487|gb|EMF41413.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 195
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT+L N + L +L WL LN+N+L L ++G L LQ L ++ NQL
Sbjct: 47 PLDVRVLILNEQKLTTLPNEIEQLKNLQWLHLNSNQLTILPKEIGQLHDLQWLDLDFNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ LP +I L +LY N++T+L + L LQ N+D NQ T + + E + L NL
Sbjct: 107 KTLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPK-EIRQLQNL 165
Query: 179 DSISLQNNQIT 189
++ L+NNQ +
Sbjct: 166 QTLYLKNNQFS 176
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N LT L + L DL WL L+ N+LK+L ++G L L L + NQL AL
Sbjct: 73 LQWLHLNSNQLTILPKEIGQLHDLQWLDLDFNQLKTLPKEIGQLKNLLTLYLGYNQLTAL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L + N+ T+L +R L LQ + NQ ++ ++ + L
Sbjct: 133 PKEIGQLKNLQWLNLDANQFTTLPKEIRQLQNLQTLYLKNNQFSIEEKERIRKL 186
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 74 SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS 133
L +L+ D+ L LN +L +L ++ L LQ L + NQL LP +I L
Sbjct: 39 ELTKALQNPLDVRVLILNEQKLTTLPNEIEQLKNLQWLHLNSNQLTILPKEIGQLHDLQW 98
Query: 134 LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
L + N++ +L + L L + +NQ+T + + E L NL ++L NQ T++
Sbjct: 99 LDLDFNQLKTLPKEIGQLKNLLTLYLGYNQLTALPK-EIGQLKNLQWLNLDANQFTTLPK 157
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+ L L LYL +NQ + + IR L
Sbjct: 158 EIRQLQNLQTLYLKNNQFSIEEKERIRKL 186
>gi|281341441|gb|EFB17025.1| hypothetical protein PANDA_011098 [Ailuropoda melanoleuca]
Length = 1599
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N
Sbjct: 103 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNE 155
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 156 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLL 215
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 216 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELVLTENLLTAL 274
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N+L E L +I G L + L N++
Sbjct: 275 PRSLGKLTKLTNLNVDRNRL-EVLPPEIGGCVALSVLSLRDNRL 317
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L++L
Sbjct: 54 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQAL 113
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 114 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELW 173
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 174 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQN-LLQRLPDG 231
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 232 IGQLKQLSILKVDQNRL 248
Score = 50.1 bits (118), Expect = 9e-04, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N+LE LP +
Sbjct: 241 LKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPPE 300
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ +L L +L V ++ N++ R F H NL ++ L
Sbjct: 301 IGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 357
Query: 184 QNNQITSM 191
NQ M
Sbjct: 358 AENQAQPM 365
>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
23134]
gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
23134]
Length = 519
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 23/199 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N + L L L L L L NNRLK++ +LG L+ L+ L + +N+L+ L
Sbjct: 256 LKKLNLKMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNL 315
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L L N +T L L L +L+ N+D N++ + + L NL+S+
Sbjct: 316 PQELTNAQALEKLNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGL-PESLGKLKNLESL 374
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT----------------------EFLLDDI 219
L+ N + + SL GL KL L L N LT E L + I
Sbjct: 375 DLRENALKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLESLDSWGNALEGLPESI 434
Query: 220 RGLKRLRTVDLSYNKINKF 238
GLK+L+ ++L+YN++ +
Sbjct: 435 GGLKKLKKMNLAYNQLTEL 453
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L +L L L L L L NN LK++ ++G L +L+ L ++ N++E LP +
Sbjct: 213 LKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKE 272
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
+ QL L NNR+ ++ L LT L+ ++ N++ + + E N L+ ++L+
Sbjct: 273 LGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQ-ELTNAQALEKLNLR 331
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N +T + +L L +L L L N+L L + + LK L ++DL N + K
Sbjct: 332 GNALTQLPKNLGNLQQLKRLNLDANRLV-GLPESLGKLKNLESLDLRENALKKL 384
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N L L L L L+ L L +N++K L + L+KL+ L I N ++ LP+++
Sbjct: 88 LSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELT 147
Query: 127 LFSQLGSLYAN-------------NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
SQL +L A+ N T+L+ L+ T QV+ ++ + + + + +
Sbjct: 148 QLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALK--TPAQVYKLELHSLRQIPVQKLK 205
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L NL+ + L NN + ++ L L L L+L +N L + + +I L++L+ ++L N
Sbjct: 206 KLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNN-LLKTVPKEIGDLQQLKKLNLKMN 264
Query: 234 KI 235
++
Sbjct: 265 RV 266
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT L S+ L +L L N L+ L +G L KL+ + + NQL L
Sbjct: 394 LKNLQLRKNALTKLPESIGKLQNLESLDSWGNALEGLPESIGGLKKLKKMNLAYNQLTEL 453
Query: 122 PSDIQLFSQLGSL-YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
P + L +L NN+ + L L L LQ F M F+++ + R+ QN
Sbjct: 454 PESLGKLENLQTLNLWNNSTLQKLPKSLGNLKNLQSFKMQFDKLPLGERNLLQN 507
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
TS +L+ T + L L+ +LK++ + ++LQ L + Q+QL+++ S++ + L
Sbjct: 25 TSWQRALKDPTKVYRLDLSGQKLKAISRNIHVFTRLQELKLAQDQLDSINSEVTALTNLQ 84
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
+ ++N++ L L L L N+ NQI + L+ L +++ N I +
Sbjct: 85 IVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTG-IARLNKLKYLNIVGNPIKKLP 143
Query: 193 SSLSGLTKLAYLYLSHNQLTEF 214
+ L+ L++LA L L ++
Sbjct: 144 AELTQLSQLATLKADKKLLVQW 165
>gi|456865424|gb|EMF83758.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
LT2116]
Length = 230
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 4/195 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P ++ L + N L + L L L+L NN+LK L ++G L +L
Sbjct: 39 NLTEALQN--PEDVQILDLSSNQLITFPKEFGKLKKLQILYLRNNQLKKLPKEIGELKEL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + NQLE LP + L LY +NN++ +L + L LQV +D NQ+ +
Sbjct: 97 QELDLNHNQLETLPKEFGKLKSLQRLYLDNNQLQALPKEIGKLKNLQVLYLDNNQLQALP 156
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+ E L NL + L +NQ+ ++ + L KL L ++N LT L +I LK L +
Sbjct: 157 K-EIGKLKNLQVLYLNDNQLKTLPKEIEYLQKLRELDSANNPLT-TLPKEIGYLKNLEEL 214
Query: 229 DLSYNKINKFGTRNE 243
LS N++ + E
Sbjct: 215 ILSNNELTTLPKKLE 229
>gi|73998572|ref|XP_535013.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Canis
lupus familiaris]
gi|301755536|ref|XP_002913604.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Ailuropoda
melanoleuca]
gi|410976089|ref|XP_003994458.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Felis
catus]
gi|281347753|gb|EFB23337.1| hypothetical protein PANDA_001424 [Ailuropoda melanoleuca]
Length = 582
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L LN N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDI-----------------QLF-----SQLGSLYA 136
L S L+ L +E N + ALP + QL+ SQ ++Y+
Sbjct: 300 PRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 137 NN---NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
N NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|158749598|ref|NP_001101180.1| leucine-rich repeats and immunoglobulin-like domains protein 2
precursor [Rattus norvegicus]
gi|149030423|gb|EDL85460.1| leucine-rich repeats and immunoglobulin-like domains 2 (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 1054
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 6/210 (2%)
Query: 35 KGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
+ TP + L LV+N I I+ AF + L + N ++ + S L +L L+N
Sbjct: 116 EPTPNITQLSLVHNLIPEINAEAFQLYSALESLDLSSNIISEIKTSSFPRMSLKYLNLSN 175
Query: 93 NRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LR 149
NR+ +LE G LS L+V + +N++ +P + L L NRI ++GL +
Sbjct: 176 NRITTLEAGCFDNLSGSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQ 235
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSH 208
GL L+ M N I+ ++ F L+N++ + L++N +T ++ L GL L LY+S
Sbjct: 236 GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVHKGWLYGLRMLQQLYVSQ 295
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N + + D +RL +DLSYN++ +
Sbjct: 296 NAIEKISPDAWEFCQRLSALDLSYNQLTRL 325
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 239 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVHKGWLYGLRMLQQLYVSQNAI 298
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L +L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 299 EKISPDAWEFCQRLSALDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 358
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + SGL L L L N++ GL+ L +DL+
Sbjct: 359 NLQTLDLRNNEISWAIEDASEVFSGLKSLTKLILQGNRIKSVTQKAFVGLESLEYLDLNN 418
Query: 233 NKI 235
N I
Sbjct: 419 NAI 421
>gi|348586599|ref|XP_003479056.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2-like [Cavia porcellus]
Length = 1063
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ AF + L + N ++ + S L +L L+NNR+ +
Sbjct: 121 ITLLSLVHNLIPEINAEAFQFYSALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITT 180
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 181 LEAGCFDNLSSSLLMVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 240
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N + +
Sbjct: 241 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIEK 300
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 301 ISPDAWEFCQRLSELDLSYNQLTRL 325
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 239 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 298
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 299 EKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 358
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 359 NLQTLDLRNNEISWAIEDASEAFTGLTSLTKLILQGNQIKSITKKAFVGLESLEHLDLNN 418
Query: 233 NKI 235
N I
Sbjct: 419 NAI 421
>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+L++ N LTSL + LT L LFL+ N+L SL ++G L+ L L + +NQL +
Sbjct: 203 SLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLASLVELNLHRNQLTS 262
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L+ + N++TSL + LT L ++ N++T + E L +L
Sbjct: 263 VPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPA-EIGQLESLRE 321
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ L NQ+ S+ + + LT L L L +NQLT
Sbjct: 322 LRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSM 355
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 96/199 (48%), Gaps = 22/199 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDL------NWLF---------------LNNNRLKSLE 99
++ +L + +N LTSL + LT L WL L NNRL SL
Sbjct: 66 SLVELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNRLTSLP 125
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
++G L+ L L +E N+L LP++I + L L NNR+TSL + LT L N+
Sbjct: 126 AEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTSLVELNL 185
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
D N E L +L ++L NN++TS+ + + LT L L+L NQLT L +I
Sbjct: 186 DDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTS-LPAEI 244
Query: 220 RGLKRLRTVDLSYNKINKF 238
L L ++L N++
Sbjct: 245 GQLASLVELNLHRNQLTSV 263
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LTS+ + LT L L L N L S+ ++G L+ L+ L + +NQL ++P++
Sbjct: 345 LDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRNQLTSMPAE 404
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L L+ N++ S+ LT L+ +D NQ+T V E L +L+ + L
Sbjct: 405 IGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPA-EIGQLTSLEMLHLG 463
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
NQ+TS+ + + LT L L+L NQLT
Sbjct: 464 GNQLTSVPAEIGQLTSLWTLHLGGNQLTSL 493
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L + N LTSL + LT L L L N+L SL ++G L L+ L + NQL +
Sbjct: 272 SLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQLRS 331
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L NN++TS+ + LT L N+ N +T + E L +L
Sbjct: 332 VPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPA-EIGQLASLKR 390
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD--DIRGLKRL 225
+ L NQ+TSM + + LT L L+L NQL + + LKRL
Sbjct: 391 LFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRL 437
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 8/172 (4%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
N LTSL + LT L L L+ N L SL ++G L+ L LL+++ ++L +LP++I
Sbjct: 5 CNQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQL 64
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS--ISLQNN 186
+ L L + N++TSL + LT L ++ T + L LDS ++L NN
Sbjct: 65 ASLVELDLSYNQLTSLPAEIGQLTSLVKLDL-----TTWLEEPPSLLEELDSWELNLGNN 119
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++TS+ + + LT L L L HN+LTE L +I L L ++L N++
Sbjct: 120 RLTSLPAEIGQLTSLVELNLEHNKLTE-LPAEIGQLASLVELNLGNNRLTSL 170
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 22/199 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L + N LTSL + LT L L L+++ L SL ++G L+ L L + NQL +
Sbjct: 20 SLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQLASLVELDLSYNQLTS 79
Query: 121 LPSDI-------------------QLFSQLGSLYAN--NNRITSLDGLLRGLTKLQVFNM 159
LP++I L +L S N NNR+TSL + LT L N+
Sbjct: 80 LPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNRLTSLPAEIGQLTSLVELNL 139
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N++T + E L +L ++L NN++TS+ + + LT L L L N L +I
Sbjct: 140 EHNKLTELPA-EIGQLASLVELNLGNNRLTSLPAEIGQLTSLVELNLDDNTPLTELPAEI 198
Query: 220 RGLKRLRTVDLSYNKINKF 238
L LR ++L N++
Sbjct: 199 GQLTSLRELNLCNNRLTSL 217
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 100/175 (57%), Gaps = 9/175 (5%)
Query: 29 LTSDDLKGTPALI------TLL-LVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
L+ + L+ PA I TLL L NN +T + E ++ +L++G N+LTS+ +
Sbjct: 324 LSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIG 383
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L L LFL+ N+L S+ ++G L+ L++L + NQL ++P++ + L L + N+
Sbjct: 384 QLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQ 443
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+TS+ + LT L++ ++ NQ+T V E L +L ++ L NQ+TS+ +++
Sbjct: 444 LTSVPAEIGQLTSLEMLHLGGNQLTSVPA-EIGQLTSLWTLHLGGNQLTSLPAAI 497
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT L + LT L L L NNRL SL ++G L+ L+ L + +NQL +LP++I + L
Sbjct: 191 LTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLASL 250
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N++TS+ + LT L+ + NQ+T + E L +L + L N++TS+
Sbjct: 251 VELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPA-EIGQLTSLVKLDLTTNKLTSL 309
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + L L L LS NQL + +I L L +DL N++
Sbjct: 310 PAEIGQLESLRELRLSGNQL-RSVPAEIGQLTSLTLLDLGNNQLTSM 355
>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 595
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK++ ++G L
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGF---STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 423
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 484 PK-EIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQT 541
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 542 LDLRNNQLTTLPT 554
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T + + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+LQ+NQ+ ++ + L L LYL +N+LT F
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 542
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L +N+ +L ++G L LQ L ++ NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T + L LQ+ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK-EMGQLQNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + L L L L N L+
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T+L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + L L L N+LT L ++ L+ L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLQNLQTLNL 285
Query: 231 SYNKINKF 238
N++ F
Sbjct: 286 VNNRLTVF 293
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 197
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT L + L +L L L N L L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L NQ T L +I L+ L+T++L N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTT-LPKEIGQLQNLQTLNLQDNQL 221
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573
>gi|194215174|ref|XP_001916975.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Equus
caballus]
Length = 1642
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQSLPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L+SL
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQSL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|355719293|gb|AES06552.1| soc-2 suppressor of clear-like protein [Mustela putorius furo]
Length = 582
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L LN N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 299
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDI-----------------QLF-----SQLGSLYA 136
L S L+ L +E N + ALP + QL+ SQ ++Y+
Sbjct: 300 PRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 137 NN---NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
N NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|397521130|ref|XP_003830656.1| PREDICTED: leucine-rich repeat-containing protein 40 [Pan paniscus]
Length = 602
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN +T++ +S S L+ L
Sbjct: 142 ILPEEITNLRNLKCLYLQHNELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS N+L L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNELKS-LPAEINRMKRLKHLDCNSN 230
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NN +T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ N++ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 204 LSSNELKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 255
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 31 SDDLKGTPALITLLLVNN------------------NITHIHENAFPPTI------RKLH 66
+DDL+ PAL L + +N N++H P I + L+
Sbjct: 98 TDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLY 157
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N LT ++ L++L L L+NN L ++ +LS L L + N+L++LP++I
Sbjct: 158 LQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEIN 217
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+L L N+N + ++ L G+ L++ + N++ + EF + L + + N
Sbjct: 218 RMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL--PEFPSCSLLKELHVGEN 275
Query: 187 QITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QI + + L L + L L N+L + D+I L+ L +DLS N I+
Sbjct: 276 QIEMLEAEHLKHLNSILVLDLRDNKLKS-VPDEIILLQSLERLDLSNNDISSL 327
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + + L L N+N L+++ +L + L+LL + +N+L LP
Sbjct: 201 RLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP- 259
Query: 124 DIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ S L L+ N+I L+ L+ L + V ++ N++ V DE L +L+ +
Sbjct: 260 EFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLD 318
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NN I+S+ SL L L +L L N L
Sbjct: 319 LSNNDISSLPYSLGNL-HLKFLALEGNPL 346
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N+L + +L L KL L + N L +LP +++ +L ++ + NR L +L +
Sbjct: 459 NKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEVLYRIF 518
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L+ + NQ+ V + + + NL ++ LQNN + + L L L L N
Sbjct: 519 TLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLGGN 575
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ + + FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 451 VSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKML 510
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 511 PEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 566
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 567 LRTLLLGGN 575
>gi|307574646|ref|NP_001182620.1| biglycan precursor [Oryctolagus cuniculus]
Length = 369
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN IT IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKITKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKITKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 597
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK++ ++G L
Sbjct: 369 SFPKVILKFRNLRGLNLYDCGF---STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 425
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 426 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 485
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 486 PK-EIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQT 543
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 544 LDLRNNQLTTLPT 556
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 426 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 485
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 486 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 544
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+
Sbjct: 545 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 590
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 98 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 157
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 158 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPK-EIGQLQNLQTL 216
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+L +NQ+ ++ + L L LYL +N+LT F
Sbjct: 217 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVF 249
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 42 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 101
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 102 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGRLQNLQDLGLYKNKLTTFPKE 160
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 161 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 199
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 110 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 169
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T L + L LQ N+ NQ+ +
Sbjct: 170 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPV- 228
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + L L L N+LT L + L+ L+T++L
Sbjct: 229 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTA-LPKKMGQLQNLQTLNL 287
Query: 231 SYNKINKF 238
N++ F
Sbjct: 288 VNNRLTVF 295
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L L ++G L LQ L + NQL
Sbjct: 49 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQL 108
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 109 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 167
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L NQ T L +I L+ L+T++LS N++
Sbjct: 168 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT-ILPKEIGQLQNLQTLNLSDNQL 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L +N+ L ++G L LQ L + NQL L
Sbjct: 167 LQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T + L LQ+ N++T + + Q L NL ++
Sbjct: 227 PVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQ-LQNLQTL 285
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + L L L L N L+
Sbjct: 286 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 316
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL ++G L LQ+L +N+L AL
Sbjct: 213 LQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTAL 272
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P + L +L NNR+T + L LQ + N +++ R Q L NL
Sbjct: 273 PKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 332
Query: 179 D 179
D
Sbjct: 333 D 333
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 484 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 543
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 544 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 575
>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 595
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK++ ++G L
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGF---STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 423
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 484 PK-EIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT-VLPKEIGKLKKLQT 541
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 542 LDLRNNQLTTLPT 554
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N L L + L +L L L+ N LK ++ L KLQ L + NQ
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ T++ + E L L ++
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPK-EIGKLKKLQTL 542
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
L+NNQ+T++ + + L L +LYL +NQ + + IR L L+
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T + + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+LQ+NQ+ ++ + L L LYL +N+L F
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLIVF 247
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L +N+ +L ++G L LQ L ++ NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+ + L LQ+ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTALPK-EMGQLQNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + L L L L N L+
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T+L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++ + L L L N+LT L ++ L+ L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLQNLQTLNL 285
Query: 231 SYNKINKF 238
N++ F
Sbjct: 286 VNNRLTVF 293
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L +G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 197
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L NQ T L +I L+ L+T++L N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTT-LPKEIGQLQNLQTLNLQDNQL 221
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+ +
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573
>gi|114557142|ref|XP_513483.2| PREDICTED: leucine-rich repeat-containing protein 40 [Pan
troglodytes]
gi|410217710|gb|JAA06074.1| leucine rich repeat containing 40 [Pan troglodytes]
gi|410257504|gb|JAA16719.1| leucine rich repeat containing 40 [Pan troglodytes]
gi|410300344|gb|JAA28772.1| leucine rich repeat containing 40 [Pan troglodytes]
gi|410331221|gb|JAA34557.1| leucine rich repeat containing 40 [Pan troglodytes]
Length = 602
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN +T++ +S S L+ L
Sbjct: 142 ILPEEITNLRNLKCLYLQHNELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS N+L L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNELKS-LPAEINRMKRLKHLDCNSN 230
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NN +T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ N++ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 204 LSSNELKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 255
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 31 SDDLKGTPALITLLLVNN------------------NITHIHENAFPPTI------RKLH 66
+DDL+ PAL L + +N N++H P I + L+
Sbjct: 98 TDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLY 157
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N LT ++ L++L L L+NN L ++ +LS L L + N+L++LP++I
Sbjct: 158 LQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEIN 217
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+L L N+N + ++ L G+ L++ + N++ + EF + L + + N
Sbjct: 218 RMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL--PEFPSCSLLKELHVGEN 275
Query: 187 QITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QI + + L L + L L N+L + D+I L+ L +DLS N I+
Sbjct: 276 QIEMLEAEHLKHLNSILVLDLRDNKLKS-VPDEIILLQSLERLDLSNNDISSL 327
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + + L L N+N L+++ +L + L+LL + +N+L LP
Sbjct: 201 RLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP- 259
Query: 124 DIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ S L L+ N+I L+ L+ L + V ++ N++ V DE L +L+ +
Sbjct: 260 EFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLD 318
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NN I+S+ SL L L +L L N L
Sbjct: 319 LSNNDISSLPYSLGNL-HLKFLALEGNPL 346
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N+L + +L L KL L + N L +LP +++ +L ++ + NR L +L +
Sbjct: 459 NKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEVLYRIF 518
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L+ + NQ+ V + + + NL ++ LQNN + + L L L L N
Sbjct: 519 TLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGN 575
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ + + FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 451 VSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKML 510
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 511 PEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 566
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 567 LRTLLLDGN 575
>gi|21361633|ref|NP_060238.3| leucine-rich repeat-containing protein 40 [Homo sapiens]
gi|74761553|sp|Q9H9A6.1|LRC40_HUMAN RecName: Full=Leucine-rich repeat-containing protein 40
gi|10434638|dbj|BAB14326.1| unnamed protein product [Homo sapiens]
gi|14250313|gb|AAH08586.1| Leucine rich repeat containing 40 [Homo sapiens]
gi|119626865|gb|EAX06460.1| leucine rich repeat containing 40 [Homo sapiens]
gi|325463579|gb|ADZ15560.1| leucine rich repeat containing 40 [synthetic construct]
Length = 602
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN +T++ +S S L+ L
Sbjct: 142 ILPEEITNLRNLKCLYLQHNELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS N+L L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNELKS-LPAEINRMKRLKHLDCNSN 230
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 31 SDDLKGTPALITLLLVNN------------------NITHIHENAFPPTI------RKLH 66
+DDL+ PAL L + +N N++H P I + L+
Sbjct: 98 TDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLY 157
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N LT ++ L++L L L+NN L ++ +LS L L + N+L++LP++I
Sbjct: 158 LQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEIN 217
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+L L N+N + ++ L G+ L++ + N++ + EF + L + + N
Sbjct: 218 RMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL--PEFPSCSLLKELHVGEN 275
Query: 187 QITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QI + + L L + L L N+L + D+I L+ L +DLS N I+
Sbjct: 276 QIEMLEAEHLKHLNSILVLDLRDNKLKS-VPDEIILLRSLERLDLSNNDISSL 327
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NN +T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ N++ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 204 LSSNELKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 255
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + + L L N+N L+++ +L + L+LL + +N+L LP
Sbjct: 201 RLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP- 259
Query: 124 DIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ S L L+ N+I L+ L+ L + V ++ N++ V DE L +L+ +
Sbjct: 260 EFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLRSLERLD 318
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NN I+S+ SL L L +L L N L
Sbjct: 319 LSNNDISSLPYSLGNL-HLKFLALEGNPL 346
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N+L + +L L KL L + N L +LP +++ +L ++ + NR L +L +
Sbjct: 459 NKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEVLYRIF 518
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L+ + NQ+ V + + + NL ++ LQNN + + L L L L N
Sbjct: 519 TLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGN 575
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ + + FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 451 VSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKML 510
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 511 PEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 566
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 567 LRTLLLDGN 575
>gi|426218873|ref|XP_004003659.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2 [Ovis aries]
Length = 1051
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ F P + L + N ++ + S L +L L+NNR+
Sbjct: 108 ITLLSLVHNIIPEINAEVFQFYPALETLDLSSNLISEIKTSSFPRMQLKYLNLSNNRITV 167
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 168 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKVVEGLTFQGLDSL 227
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L N++ + L++N +T +N L GL L LY+S N +
Sbjct: 228 RSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAVER 287
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 288 ISPDAWEFCQRLSELDLSYNQLTRL 312
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 226 SLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAV 285
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 286 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 345
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL +++L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 346 NLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSVTKKAFIGLESLEHLDLNN 405
Query: 233 NKI 235
N I
Sbjct: 406 NAI 408
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 33/211 (15%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
+G +L +L + N I+ + + AF + +L + NNLT +N L GL L L++
Sbjct: 221 FQGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYV 280
Query: 91 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGL 147
+ N ++ + +L L + NQL L S S L L +NR+T + DG+
Sbjct: 281 SQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGV 340
Query: 148 LRGLTKLQVFNM---------------------------DFNQITMVRRDEFQNLHNLDS 180
R L+ LQ N+ NQI V + F L +L+
Sbjct: 341 FRFLSNLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSVTKKAFIGLESLEH 400
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I S+ + T+L L L+ N L
Sbjct: 401 LDLNNNAIMSIQENAFSQTRLKELILNTNSL 431
>gi|348524302|ref|XP_003449662.1| PREDICTED: protein LAP2 [Oreochromis niloticus]
Length = 1352
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 25/194 (12%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
+ N ++ L L L L+LN+ L+ L G L+KLQ+L + +NQL+ LP
Sbjct: 125 VEASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKS 184
Query: 125 IQLFSQ-----LGS------------------LYANNNRITSLDGLLRGLTKLQVFNMDF 161
+Q +Q LGS L+ + N++T L G+L L +L ++
Sbjct: 185 MQKLTQLERLDLGSNEFTEVPEVVEQLTGLKELWMDGNKLTFLPGMLGTLKQLVYLDVSK 244
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N + MV ++ NL + L NN +T + S+ L KL L + NQL +L D I G
Sbjct: 245 NNLEMV-DEQICGCENLQDLLLSNNALTQLPGSIGTLKKLTALKVDENQLM-YLPDSIGG 302
Query: 222 LKRLRTVDLSYNKI 235
L + +D S+N+I
Sbjct: 303 LTCIDELDCSFNEI 316
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NNL ++ + G +L L L+NN L L G +GTL KL L +++NQL LP
Sbjct: 240 LDVSKNNLEMVDEQICGCENLQDLLLSNNALTQLPGSIGTLKKLTALKVDENQLMYLPDS 299
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV-------RR-------- 169
I + + L + N I +L + ++ F D N + + +R
Sbjct: 300 IGGLTCIDELDCSFNEIEALPATIGQCVNMRTFAADHNFLAQLPPEMGNWKRATVLFLHS 359
Query: 170 -------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
+E ++ L I+L NN++ ++ S + LT+L ++LS NQ
Sbjct: 360 NKLESLPEEMGDMQKLKVINLSNNKLKNLPYSFTKLTELTAMWLSENQ 407
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N T + + LT L L+++ N+L L G LGTL +L L + +N LE +
Sbjct: 191 LERLDLGSNEFTEVPEVVEQLTGLKELWMDGNKLTFLPGMLGTLKQLVYLDVSKNNLEMV 250
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
I L L +NN +T L G + L KL +D NQ+ M D L +D +
Sbjct: 251 DEQICGCENLQDLLLSNNALTQLPGSIGTLKKLTALKVDENQL-MYLPDSIGGLTCIDEL 309
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+I ++ +++ + HN L + L ++ KR + L NK+
Sbjct: 310 DCSFNEIEALPATIGQCVNMRTFAADHNFLAQ-LPPEMGNWKRATVLFLHSNKL 362
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + N+LT L ++ L +L L ++ N ++ + L ++ N + LP
Sbjct: 78 RLSMPDNDLTVLPAAIANLINLRELDVSKNSIQDFPENIKNCKGLAIVEASVNPISKLPE 137
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
L LY N+ + L LTKLQ+ + NQ+ M+ + Q L L+ + L
Sbjct: 138 GFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKS-MQKLTQLERLDL 196
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+N+ T + + LT L L++ N+LT FL + LK+L +D+S N
Sbjct: 197 GSNEFTEVPEVVEQLTGLKELWMDGNKLT-FLPGMLGTLKQLVYLDVSKN 245
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
I +L FN + +L ++ ++ ++N L L ++G + +L + N+LE+
Sbjct: 305 CIDELDCSFNEIEALPATIGQCVNMRTFAADHNFLAQLPPEMGNWKRATVLFLHSNKLES 364
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + +NN++ +L LT+L + NQ
Sbjct: 365 LPEEMGDMQKLKVINLSNNKLKNLPYSFTKLTELTAMWLSENQ 407
>gi|301757583|ref|XP_002914662.1| PREDICTED: leucine-rich repeat-containing G-protein coupled
receptor 6-like [Ailuropoda melanoleuca]
Length = 978
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 77/264 (29%), Positives = 111/264 (42%), Gaps = 45/264 (17%)
Query: 16 NLIDLEPETGSHPLTS------DD----------LKGTPALITLLLVNNNITHIHENAFP 59
NLI L PE L+S DD L PAL + L N I+HI + AF
Sbjct: 159 NLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQ 218
Query: 60 --PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
++ LH+ N++ L +S GL +L L LN N L+ + TL +LQ L N
Sbjct: 219 NLTSLVVLHLHNNHIQHLGTHSFDGLHNLETLDLNYNELQEFPVAIRTLGRLQELGFHNN 278
Query: 117 QLEALPSD-----------------IQLFSQLGSLYANNNRITSLDGL--------LRGL 151
++A+P IQ + Y SL+G L+G
Sbjct: 279 NIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLNGATDIQEFPDLKGT 338
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
T L++ + I ++ Q L L ++ L +NQI + SL KL + L HN++
Sbjct: 339 TSLEILTLTRAGIRLLPPGMCQQLPRLRALELSHNQIEEL-PSLHRCQKLEEIGLQHNRI 397
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
E D L LR +DLS+N I
Sbjct: 398 WEIGADTFSQLSSLRALDLSWNAI 421
Score = 50.4 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 47 NNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNN-NRLKSLEGQL 102
NNNI I E AF P ++ +H N + + S + L L+ L LN ++
Sbjct: 277 NNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLNGATDIQEFPDLK 336
Query: 103 GTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
GT S L++L + + + LP + Q +L +L ++N+I L L R KL+ +
Sbjct: 337 GTTS-LEILTLTRAGIRLLPPGMCQQLPRLRALELSHNQIEELPSLHR-CQKLEEIGLQH 394
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N+I + D F L +L ++ L N I S++ + L L L L+ NQL L +
Sbjct: 395 NRIWEIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLAALPLAGLG 454
Query: 221 GLKRLR 226
GL L+
Sbjct: 455 GLMHLK 460
Score = 50.1 bits (118), Expect = 9e-04, Method: Composition-based stats.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 26/241 (10%)
Query: 19 DLEPETGSHPLTSDDLKG-TPALI-------TLLLVNNNITHIHENAFPP--TIRKLHVG 68
DL+P T L+ ++L P L L L N+++HI AF +++ L +
Sbjct: 74 DLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQ 133
Query: 69 FNNLTSL-NNSLRGLTDLNWLFLNNNRL-----KSLEGQLGTLSKLQLLVIEQNQLEALP 122
N L + +L L L L L+ N + +S EG LS L+ L ++ N L +P
Sbjct: 134 NNQLGGIPAEALWELPSLQSLRLDANLISLVPERSFEG----LSSLRHLWLDDNALTEIP 189
Query: 123 SDIQLFSQLGSLYANN---NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
++ + L +L A NRI+ + D + LT L V ++ N I + F LHNL
Sbjct: 190 --VRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNHIQHLGTHSFDGLHNL 247
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+++ L N++ ++ L +L L +N + G L+T+ N I
Sbjct: 248 ETLDLNYNELQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFV 307
Query: 239 G 239
G
Sbjct: 308 G 308
>gi|428311014|ref|YP_007121991.1| hypothetical protein Mic7113_2802 [Microcoleus sp. PCC 7113]
gi|428252626|gb|AFZ18585.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
Length = 348
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I ++L + N L +L + LT+L L L+NN+L +L ++G L+ L L
Sbjct: 54 LPPEIGQLTNLKELDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGL 113
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
++ NQL ALP +I L L +NR+T L + LT L + D NQ+ M E
Sbjct: 114 SLDSNQLTALPEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQL-MTLPKE 172
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
N NL +SL NNQ+ + + LT L L + +N+LT L +I L L + L
Sbjct: 173 IGNFINLTGLSLDNNQLRELPQDIGNLTNLTRLSIDNNKLTS-LPKEIGNLTNLTQLSLD 231
Query: 232 YNKINKF 238
NK+ +
Sbjct: 232 NNKLTEL 238
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
L S+ L G P I N+TH++ +L N L +L + +L L
Sbjct: 138 LYSNRLTGLPKEI------GNLTHLN---------RLSCDNNQLMTLPKEIGNFINLTGL 182
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
L+NN+L+ L +G L+ L L I+ N+L +LP +I + L L +NN++T L +
Sbjct: 183 SLDNNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTELLKEI 242
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
LT L +D NQ+ + +E L NL ++SL NQ++S+ +++ LT L L L
Sbjct: 243 GNLTHLTALAIDSNQLKSLP-EEMGQLINLTTLSLYKNQLSSLPTAIGNLTHLTKLSLYS 301
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQLT L +I L L ++ L N +
Sbjct: 302 NQLT-ALPKEIGILTNLTSLSLDNNPL 327
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N LT L + LT LN L +NN+L +L ++G L L ++ NQL L
Sbjct: 133 LTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGLSLDNNQLREL 192
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI + L L +NN++TSL + LT L ++D N++T + + E NL +L ++
Sbjct: 193 PQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTELLK-EIGNLTHLTAL 251
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
++ +NQ+ S+ + L L L L NQL+
Sbjct: 252 AIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSL 284
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N LTSL + LT+L L L+NN+L L ++G L+ L L I+ NQL++L
Sbjct: 202 LTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTELLKEIGNLTHLTALAIDSNQLKSL 261
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L +L N+++SL + LT L ++ NQ+T + + E L NL S+
Sbjct: 262 PEEMGQLINLTTLSLYKNQLSSLPTAIGNLTHLTKLSLYSNQLTALPK-EIGILTNLTSL 320
Query: 182 SLQNNQITSMNSSL 195
SL NN +TS S +
Sbjct: 321 SLDNNPLTSPPSEI 334
>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 400
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N LT+L N + L +L L+L N L +L ++G L L L + N+L L
Sbjct: 232 LQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTL 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY N+ T+L +R L LQV ++ NQ+ + +E + L NL +
Sbjct: 292 PKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLP-NEIEKLQNLQVL 350
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L +NQ+ ++ + L L LYL +NQL+ + IR L
Sbjct: 351 DLNDNQLKTLPKEIEKLQNLQRLYLQYNQLSSEEKERIRKL 391
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT L + L +L L+L++N+LK+L ++G L LQ L + NQL L
Sbjct: 186 LQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTL 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L LY N +T+L + L L ++ N++T + + E L NL +
Sbjct: 246 PNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPK-EIGQLKNLREL 304
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ T++ + L L L+L++NQL + L ++I L+ L+ +DL+ N++
Sbjct: 305 YLGTNQFTALPKEIRQLQNLQVLFLNNNQL-KTLPNEIEKLQNLQVLDLNDNQL 357
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 9/170 (5%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
L+S+ LK P I TL L +N +T + +E + +L++G N LT+L +
Sbjct: 214 LSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVG 273
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L +L L L+NNRL +L ++G L L+ L + NQ ALP +I+ L L+ NNN+
Sbjct: 274 QLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQ 333
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
+ +L + L LQV +++ NQ+ + + E + L NL + LQ NQ++S
Sbjct: 334 LKTLPNEIEKLQNLQVLDLNDNQLKTLPK-EIEKLQNLQRLYLQYNQLSS 382
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ D+ L L+ +LK+L ++G L LQ L + NQL LP++I L
Sbjct: 36 TDLTKALKNPLDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQ 95
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
+L + N++T+L + L LQ ++ NQ+ ++ + E L NL + L NNQ+ +
Sbjct: 96 TLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPK-EINQLQNLRVLGLSNNQLKILP 154
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L L L L NQL + L ++I LK L+T+DLS N
Sbjct: 155 KEIGQLENLQTLDLYANQL-KALPNEIGQLKNLQTLDLSKN 194
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L N + L +L L+L NN+L +L ++G L LQ L ++ NQL
Sbjct: 45 PLDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP++I L +L +N++ L + L L+V + NQ+ ++ + E L NL
Sbjct: 105 TTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPK-EIGQLENL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L NQ+ ++ + + L L L LS N LT L +I LK LR + LS N++
Sbjct: 164 QTLDLYANQLKALPNEIGQLKNLQTLDLSKNILT-ILPKEIGQLKNLRELYLSSNQL 219
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 28 PLTSDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLN 86
P LK P TL L NN +T + E +R+L++G N T+L +R L +L
Sbjct: 269 PKEVGQLKNLP---TLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQ 325
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
LFLNNN+LK+L ++ L LQ+L + NQL+ LP +I+ L LY N+++S +
Sbjct: 326 VLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYNQLSSEEK 385
Query: 147 --LLRGLTKLQVF 157
+ + L K Q++
Sbjct: 386 ERIRKLLPKCQIY 398
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L L + L +L L L N+LK+L ++G L LQ L + +N L L
Sbjct: 140 LRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTIL 199
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I L LY ++N++ +L + L LQ ++ NQ+T + +
Sbjct: 200 PKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELY 259
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL ++ L NN++T++ + L L LYL NQ T L +I
Sbjct: 260 LGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTA-LPKEI 318
Query: 220 RGLKRLRTVDLSYNKI 235
R L+ L+ + L+ N++
Sbjct: 319 RQLQNLQVLFLNNNQL 334
>gi|320165520|gb|EFW42419.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 694
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 31/244 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
++++ G AL L L NNIT I N F + L++ N L S+ ++ GLT L
Sbjct: 106 ISANAFAGLAALTMLFLPGNNITGIPANVFAGLTALLVLNLSGNQLASIPADAFTGLTAL 165
Query: 86 NWLFLNNNRLKSLEG-----------------QLGT--------LSKLQLLVIEQNQLEA 120
L L +N++ S+ +LG+ S L + + NQ+ +
Sbjct: 166 QTLNLQSNQITSISAAGFADLAALKSLGLSGNRLGSNLANAFTNQSALGFIDLSNNQITS 225
Query: 121 LPSD-IQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L +D + L +L+ +NN ITS+ + GLT L+ ++ NQ T F L L
Sbjct: 226 LLADAFTGLAALNTLFLSNNNITSIPANAVTGLTALKYLDVSGNQFTSFPASSFAGLTAL 285
Query: 179 DSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+SL NNQ TS+++ + +GLT L L LS+NQ T+ + GL L + L+ N++
Sbjct: 286 TYLSLSNNQATSISAWAFTGLTALTSLQLSNNQFTDISANAFAGLPALMELGLAGNQLTS 345
Query: 238 FGTR 241
T
Sbjct: 346 IPTS 349
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 49/211 (23%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLV 112
+ P T L + N +TS+ S LT L L L N++ + L+ L +L
Sbjct: 62 PSGIPVTTTSLSLSINQITSIPASAFANLTALTELDLTVNQITDISANAFAGLAALTMLF 121
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
+ N + +P+++ GLT L V N+ NQ+ + D F
Sbjct: 122 LPGNNITGIPANV----------------------FAGLTALLVLNLSGNQLASIPADAF 159
Query: 173 QNLHNLDSISLQNNQITSMNSS------------LSG-------------LTKLAYLYLS 207
L L +++LQ+NQITS++++ LSG + L ++ LS
Sbjct: 160 TGLTALQTLNLQSNQITSISAAGFADLAALKSLGLSGNRLGSNLANAFTNQSALGFIDLS 219
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+T L D GL L T+ LS N I
Sbjct: 220 NNQITSLLADAFTGLAALNTLFLSNNNITSI 250
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
L +D G AL TL L NNNIT I NA ++ L V N TS +S GLT L
Sbjct: 226 LLADAFTGLAALNTLFLSNNNITSIPANAVTGLTALKYLDVSGNQFTSFPASSFAGLTAL 285
Query: 86 NWLFLNNNRLKSLEG----QLGTLSKLQL-----LVIEQNQLEALPSDIQLFSQLGSLYA 136
+L L+NN+ S+ L L+ LQL I N LP+ ++L
Sbjct: 286 TYLSLSNNQATSISAWAFTGLTALTSLQLSNNQFTDISANAFAGLPALMELGLA------ 339
Query: 137 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSS 194
N++TS+ L LT L ++ NQIT + F L L S+ L NQ+TS+ ++
Sbjct: 340 -GNQLTSIPTSALLDLTLLNFLSLSANQITSIPASAFTGLTALFSLILSRNQLTSIPAAA 398
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
SGLT L L L N T +GL + L Y ++
Sbjct: 399 FSGLTLLNILSLDTNPFTTLPPGLFQGLPNDIDLSLYYESLSP 441
>gi|32425389|gb|AAH03407.2| LRRC40 protein, partial [Homo sapiens]
Length = 581
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 61 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 120
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN +T++ +S S L+ L
Sbjct: 121 ILPEEITNLRNLKCLYLQHNELTCI-SEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLV 179
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS N+L L +I +KRL+ +D + N
Sbjct: 180 RLNLSSNELKS-LPAEINRMKRLKHLDCNSN 209
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 31 SDDLKGTPALITLLLVNN------------------NITHIHENAFPPTI------RKLH 66
+DDL+ PAL L + +N N++H P I + L+
Sbjct: 77 TDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLY 136
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N LT ++ L++L L L+NN L ++ +LS L L + N+L++LP++I
Sbjct: 137 LQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEIN 196
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+L L N+N + ++ L G+ L++ + N++ + EF + L + + N
Sbjct: 197 RMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL--PEFPSCSLLKELHVGEN 254
Query: 187 QITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QI + + L L + L L N+L + D+I L+ L +DLS N I+
Sbjct: 255 QIEMLEAEHLKHLNSILVLDLRDNKLKS-VPDEIILLRSLERLDLSNNDISSL 306
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L SL + + L L N+N L+++ +L + L+LL + +N+L
Sbjct: 177 SLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRF 236
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP + S L L+ N+I L+ L+ L + V ++ N++ V DE L +L+
Sbjct: 237 LP-EFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLRSLE 294
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I+S+ SL L L +L L N L
Sbjct: 295 RLDLSNNDISSLPYSLGNL-HLKFLALEGNPL 325
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N+L + +L L KL L + N L +LP +++ +L ++ + NR L +L +
Sbjct: 438 NKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEVLYRIF 497
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L+ + NQ+ V + + + NL ++ LQNN + + L L L L N
Sbjct: 498 TLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGN 554
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ + + FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 430 VSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKML 489
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 490 PEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 545
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 546 LRTLLLDGN 554
>gi|291232979|ref|XP_002736431.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1196
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 108/193 (55%), Gaps = 9/193 (4%)
Query: 46 VNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
+N +IT++ + +RKL++ N L +++ + L L L L+NN ++SL +G +
Sbjct: 159 INQSITNLKQ------LRKLNLSGNKLINID-YITTLLKLEELHLSNNEIQSLPASIGDM 211
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
S L +L +++N L LPSDI+ QL + ++N+I L L ++ + N I+
Sbjct: 212 SDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSSNQIEIFPPGLCELNEVTSLRLANNNIS 271
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
++ D NL L + L+ NQI ++ +L L +L L L+ N+LT + DI+ L RL
Sbjct: 272 LIPPD-IANLSELLVLDLEYNQIANIPPALCDLKQLVELTLNINKLT-CIPSDIKKLVRL 329
Query: 226 RTVDLSYNKINKF 238
+T+ LS N++N+
Sbjct: 330 QTLGLSDNQLNEI 342
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 117/226 (51%), Gaps = 25/226 (11%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
D+K L TL L +N + I P + KL + N L+++ +++R L +L L L+
Sbjct: 322 DIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSAIPSAIRNLRNLQKLDLS 381
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-------ITSL 144
NN + + +L +++L L + NQL+ +PS+I QL L ++N ++SL
Sbjct: 382 NNNISVIPSELLHMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHNEGISGADSLSSL 441
Query: 145 DGL---------LRG------LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
D L LR L KLQV +M+ N I + +E QNL++L + L NQ+T
Sbjct: 442 DELSELKLNKNNLRSVPNMFKLKKLQVLHMNDNLIKEI-PEEIQNLYSLKELWLDYNQLT 500
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ S + LT L L L N+LTE + I L LR ++L YNK+
Sbjct: 501 SIPSEIGELTNLRELSLLMNKLTE-ITPAIGKLSMLRHLNLEYNKL 545
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 23/197 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +LH+ N + SL S+ ++DL L+L+ N L +L + L +L+ + + NQ+E
Sbjct: 191 LEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSSNQIEIF 250
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + +++ SL NN I+ + + L++L V ++++NQI + +L L +
Sbjct: 251 PPGLCELNEVTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANI-PPALCDLKQLVEL 309
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF---LLD-------------------DI 219
+L N++T + S + L +L L LS NQL E L D I
Sbjct: 310 TLNINKLTCIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSAIPSAI 369
Query: 220 RGLKRLRTVDLSYNKIN 236
R L+ L+ +DLS N I+
Sbjct: 370 RNLRNLQKLDLSNNNIS 386
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNN 93
+ +L L NNNI+ I PP I L + +N + ++ +L L L L LN N
Sbjct: 260 VTSLRLANNNISLI-----PPDIANLSELLVLDLEYNQIANIPPALCDLKQLVELTLNIN 314
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L + + L +LQ L + NQL +P + +L L + N ++++ +R L
Sbjct: 315 KLTCIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSAIPSAIRNLRN 374
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
LQ ++ N I+++ E +++ L + L +NQ+ + S + L +L L LSHN+
Sbjct: 375 LQKLDLSNNNISVI-PSELLHMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHNE--- 430
Query: 214 FLLDDIRGLKRLRTVD-LSYNKINK 237
I G L ++D LS K+NK
Sbjct: 431 ----GISGADSLSSLDELSELKLNK 451
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 29/188 (15%)
Query: 79 LRGLTDLNW-------LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L G+ L W + LN L+ L + L+ + N L LP+++ +L
Sbjct: 64 LSGMDILRWSNPTDEEINLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRL 123
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR---------------------D 170
+ +N+ + + L KL NM N +T + + D
Sbjct: 124 KKIELQSNKFDQMPVPIFKLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNKLINID 183
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
L L+ + L NN+I S+ +S+ ++ L LYL N LT L DI+ L +L +D+
Sbjct: 184 YITTLLKLEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTT-LPSDIKKLHQLERIDV 242
Query: 231 SYNKINKF 238
S N+I F
Sbjct: 243 SSNQIEIF 250
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L + +N LTS+ + + LT+L L L N+L + +G LS L+ L +E N+L+
Sbjct: 488 SLKELWLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLSMLRHLNLEYNKLKT 547
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRG------LTKLQVFNMDFNQITMVRRDEFQN 174
LP ++ N + D L+G L K ++ + ++ +RR +
Sbjct: 548 LPEEV-------------NNLIDCDIRLKGNPMSQDLDKESSYHKEDTKVVRIRRSQEYQ 594
Query: 175 LHNL 178
H L
Sbjct: 595 SHKL 598
>gi|344275675|ref|XP_003409637.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2 [Loxodonta africana]
Length = 1065
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 36 GTPAL-ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
G PA ITLL LV+N I I+ P + L + N ++ + S L +L L+
Sbjct: 116 GEPASNITLLSLVHNIIPEINAEMLQVYPALENLDLSSNVISEIKASSFPRMQLKYLNLS 175
Query: 92 NNRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-L 148
NNR+ +LE G LS L+V + +N++ +P I L L NRI ++GL
Sbjct: 176 NNRITTLEAGCFDNLSSSLLVVKLNRNRISVIPPKIFKLPHLQFLELKRNRIKIVEGLTF 235
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLS 207
+GL L+ M N I+ ++ F L N++ + L++N +T +N L GL L LY+S
Sbjct: 236 QGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVS 295
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N + D +RL +DLSYN++ +
Sbjct: 296 QNAIERVSPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAI 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T V F+ L
Sbjct: 300 ERVSPDAWEFCQRLSELDLSYNQLTRLDESTFVGLSLLERLNLGDNRVTHVADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL L +DL+
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLGSLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
>gi|71895087|ref|NP_001026407.1| leucine-rich repeat protein SHOC-2 [Gallus gallus]
gi|82231244|sp|Q5F4C4.1|SHOC2_CHICK RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|60098359|emb|CAH65010.1| hypothetical protein RCJMB04_1b13 [Gallus gallus]
Length = 529
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + ++ L ++++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 104 RLDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPD 163
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ +L L +N++ + ++ LT L + FN+IT V +D + L L +S+
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKD-IKTLSKLTMLSI 222
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ N+I + + + L L L ++HNQL E L ++I ++ +DL +N++
Sbjct: 223 RENKIKQLPAEIGELCNLITLDVAHNQL-EHLPEEIGSCTQITNLDLQHNEL 273
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + + LD ++L+
Sbjct: 257 IGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKS-LAKCSELDELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L + I L L + L YN+++
Sbjct: 246 AHNQLEHLPEEIGSCTQITNLDLQHNELLD-LPETIGNLSSLSRLGLRYNRLSAI 299
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+++ SL ++L+ L L NN + +L EG L +L KL L + +N +
Sbjct: 285 SLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQ 344
Query: 120 ALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+ P FS + SL +NRI + G+ L NM NQ+T + D F +
Sbjct: 345 SYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTS 403
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+T + +SGL L L LS+N L + L I L++LR +DL NK+
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKK-LPHGIGNLRKLRELDLEENKL 460
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVF------------------------NM 159
+ S+L L NN I++L +GLL L KL NM
Sbjct: 303 LAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N LT + + GL L L L+NN LK L +G L KL+ L +E+N+LE+LP+
Sbjct: 406 ELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPN 465
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+I L L NN++T+L + LT L + N +T
Sbjct: 466 EIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLT 507
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L+ L + +N+L SL GT + + L + NQL +P D+ L L +NN + L
Sbjct: 381 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ L KL+ +++ N++ + +E L +L + L NNQ+T++ + LT L +L
Sbjct: 441 PHGIGNLRKLRELDLEENKLESLP-NEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHL 499
Query: 205 YLSHNQLT 212
L N LT
Sbjct: 500 GLGENLLT 507
>gi|126305957|ref|XP_001379454.1| PREDICTED: leucine-rich repeat-containing protein 40-like
[Monodelphis domestica]
Length = 598
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 4/162 (2%)
Query: 74 SLNNSLRGL--TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
S N+S R TDL L ++NN+L+SL L L L +L + NQL +LP I L
Sbjct: 66 SFNSSERWWEQTDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNQLTSLPCAIGELENL 125
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L ++N++ L L L L+V + +N++T V + F L L+ + L NN++T++
Sbjct: 126 QKLNVSHNKLKMLPEELTKLRNLKVLFLQYNELTCV-PEGFGGLDKLEDLDLSNNRLTTV 184
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+S S L+KL L L+ NQ+ L +I +KRL+ +D + N
Sbjct: 185 PASFSSLSKLMKLNLASNQMKN-LPAEITRMKRLKHLDCTSN 225
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTD 84
SDDL+ PAL L + +N +T + P I +KL+V N L L L L +
Sbjct: 93 SDDLRLLPALTILDMHDNQLT-----SLPCAIGELENLQKLNVSHNKLKMLPEELTKLRN 147
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L LFL N L + G L KL+ L + N+L +P+ S+L L +N++ +L
Sbjct: 148 LKVLFLQYNELTCVPEGFGGLDKLEDLDLSNNRLTTVPASFSSLSKLMKLNLASNQMKNL 207
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ + +L+ + N + + E N+ +L+ + L+ N++ + S + L L
Sbjct: 208 PAEITRMKRLKHLDCTSNYLETI-PSELANMESLELLYLRRNKLRFLPEFPSCML-LKEL 265
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ NQ+ E ++ LK + +DL NK+
Sbjct: 266 HIGENQIEEITAGHLKHLKSVHVLDLRDNKL 296
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 30/168 (17%)
Query: 49 NITHIHENAFP-------PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
N T H N P T+ +++GFN L+ ++ L L L L + NN L SL +
Sbjct: 427 NFTKNHLNEIPQRIVELKATVCDVNLGFNKLSCISAELCALHKLIHLDIRNNLLTSLPEE 486
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+ LS+LQ + + N+L+A P + L ++ NN++ S+D L
Sbjct: 487 MEALSRLQTINLSFNRLQAFPCVLYRLRTLETVLLGNNQLGSVDPL-------------- 532
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
Q + L ++ LQNN + + L L L L N
Sbjct: 533 ---------RLQQMDRLATLDLQNNDLLHVPPELGNCVSLRTLLLEGN 571
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 38/165 (23%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWL 88
L S+ +K PA IT + ++ L N L ++ + L + L L
Sbjct: 199 LASNQMKNLPAEITRM---------------KRLKHLDCTSNYLETIPSELANMESLELL 243
Query: 89 FLNNNRLKSLE-----------------------GQLGTLSKLQLLVIEQNQLEALPSDI 125
+L N+L+ L G L L + +L + N+L+++P +I
Sbjct: 244 YLRRNKLRFLPEFPSCMLLKELHIGENQIEEITAGHLKHLKSVHVLDLRDNKLKSIPDEI 303
Query: 126 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L L L NN + SL +L L L+ ++ N + +RR+
Sbjct: 304 TLLQALERLDLTNNDVRSLPHILGTLPHLKFLALEGNPLRTIRRE 348
>gi|179433|gb|AAA52287.1| biglycan [Homo sapiens]
Length = 394
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 131 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRNVQKLYISKNHLVEIPPNLPSSLVEL 190
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 191 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 250
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 251 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 307
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 308 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 362
Query: 237 KF 238
F
Sbjct: 363 LF 364
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L +Q L I +N L +P ++
Sbjct: 126 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRNVQKLYISKNHLVEIPPNLP- 184
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 185 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 242
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 243 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 291
>gi|403257782|ref|XP_003921473.1| PREDICTED: leucine-rich repeat-containing protein 40 [Saimiri
boliviensis boliviensis]
Length = 615
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ + L L ++N++
Sbjct: 95 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLK 154
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++ + + F+ L NL+ + L NN++T++ +S S L+ L
Sbjct: 155 ILPEEITNLRNLKCLYLQHNELICI-SEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLV 213
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL L +I +KRL+ +D + N
Sbjct: 214 RLNLSSNQLKS-LPAEINRMKRLKHLDCNSN 243
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 97 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKIL 156
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NNR+T++ L+ L N
Sbjct: 157 PEEITNLRNLKCLYLQHNELICISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLN 216
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ NQ+ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 217 LSSNQLKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 268
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L SL + + L L N+N L+++ +L + L+LL + +N+L
Sbjct: 211 SLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRF 270
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP + S L L+ N+I L+ L+ L + V ++ N++ V DE LH+L+
Sbjct: 271 LP-EFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLHSLE 328
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I+S+ SL L L +L L N L
Sbjct: 329 RLDLSNNDISSLPYSLGNL-HLKFLALEGNPL 359
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L S+ +L L KL L + N L +LP +++L +L ++ + NR
Sbjct: 464 VSDVNLSF---NKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRF 520
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ + + + + NL ++ LQNN + + L L
Sbjct: 521 KMLPEVLYRIFTLETILISNNQVGSMDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNL 580
Query: 202 AYLYLSHN 209
L L N
Sbjct: 581 RTLLLDGN 588
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +++ FN L+S++ L L L +L L NN L SL ++ L +LQ + + N+ + L
Sbjct: 464 VSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRFKML 523
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 524 PEVLYRIFTLETILISNNQVGSMDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 579
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 580 LRTLLLDGN 588
>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 598
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK++ ++G L
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGF---STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 423
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 484 PK-EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFT-VLPKEIGKLKKLQT 541
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 542 LDLRNNQLTTLPT 554
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N L ++ + + L +L L L N L+ L ++G L LQ L + QN L+
Sbjct: 401 LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIF 460
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I+ +L L + N+ T+ + L LQ N+ NQ+T + + + QNL LD
Sbjct: 461 PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELD 520
Query: 180 --------------------SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
++ L+NNQ+T++ + + L L +LYL +NQL+ + I
Sbjct: 521 LNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERI 580
Query: 220 RGLKRLRT 227
R L L+
Sbjct: 581 RKLLPLKC 588
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+L +NQ+ ++ + L L LYL +N+LT F
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVF 247
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + L L L N+LT L ++ L+ L+T++L
Sbjct: 227 EIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLQNLQTLNL 285
Query: 231 SYNKINKF 238
N++ F
Sbjct: 286 VNNRLTVF 293
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L +N+ L ++G L LQ L + NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T + L LQ+ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK-EMGQLQNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + L L L L N L+
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L NQ T L +I L+ L+T++LS N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT-ILPKEIGQLQNLQTLNLSDNQL 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 197
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 595
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK++ ++G L
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGF---STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 423
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 484 PK-EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFT-VLPKEIGKLKKLQT 541
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 542 LDLRNNQLTTLPT 554
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N L ++ + + L +L L L N L+ L ++G L LQ L + QN L+
Sbjct: 401 LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIF 460
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I+ +L L + N+ T+ + L LQ N+ NQ+T + + + QNL LD
Sbjct: 461 PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELD 520
Query: 180 --------------------SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
++ L+NNQ+T++ + + L L +LYL +NQL+ + I
Sbjct: 521 LNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERI 580
Query: 220 RGLKRLRT 227
R L L+
Sbjct: 581 RKLLPLKC 588
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T + + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+LQ+NQ+ ++ + L L LYL +N+LT F
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +KL + N LT+L + L +L L L +N+ +L ++G L LQ
Sbjct: 154 TFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQT 213
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L ++ NQL LP +I L LY NNR+T + L LQ+ N++T + +
Sbjct: 214 LNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPK- 272
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
E L NL +++L NN++T + L L L L N L+
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T+L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + L L L N+LT L ++ L+ L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTA-LPKEMGQLQNLQTLNL 285
Query: 231 SYNKINKF 238
N++ F
Sbjct: 286 VNNRLTVF 293
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGQLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 197
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L NQ T L +I L+ L+T++L N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTT-LPKEIGQLQNLQTLNLQDNQL 221
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
>gi|395860102|ref|XP_003802354.1| PREDICTED: protein scribble homolog isoform 3 [Otolemur garnettii]
Length = 1669
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-PEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|194211220|ref|XP_001498327.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Equus
caballus]
Length = 803
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 283 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 342
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L +L+ + L NN++T + +S S L+ L
Sbjct: 343 ILPEEITNLRNLKGLYLQHNELTCL-PEGFEQLFSLEDLDLSNNRLTIVPASFSSLSSLV 401
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL + L +I G+KRL+ +D + N
Sbjct: 402 RLNLSSNQL-KSLPAEISGMKRLKHLDCNSN 431
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P + L + N LTSL +++R L +L L +++N+LK L ++ L L+ L ++ N+L
Sbjct: 306 PALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELT 365
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP + L L +NNR+T + L+ L N+ NQ+ + E + L
Sbjct: 366 CLPEGFEQLFSLEDLDLSNNRLTIVPASFSSLSSLVRLNLSSNQLKSL-PAEISGMKRLK 424
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
+ +N + ++ L+ + L LYL N+L L + K L+ + + N+I G
Sbjct: 425 HLDCNSNLLETIPPELASMESLELLYLRRNKLR--FLPEFPSCKLLKELHVGENQIEMLG 482
Query: 240 T 240
Sbjct: 483 A 483
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + G+ L L N+N L+++ +L ++ L+LL + +N+L LP
Sbjct: 402 RLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP- 460
Query: 124 DIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ L L+ N+I L L+ L + V ++ N++ V DE L +L+ +
Sbjct: 461 EFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLERLD 519
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NN I+S+ SL G L +L L N L
Sbjct: 520 LSNNDISSLPYSL-GKLHLKFLALEGNPL 547
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L TL KL L + N L +LP +++ +L ++ + NR
Sbjct: 652 VSDVNLSF---NKLSFVSLELCTLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRF 708
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 709 KILPEVLYRIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNL 768
Query: 202 AYLYLSHN 209
L L N
Sbjct: 769 RTLLLDGN 776
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +++ FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 652 VSDVNLSFNKLSFVSLELCTLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKIL 711
Query: 122 PSDIQLFSQLGSLYANNNRITSLDG----LLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D + L L + N D QI E N N
Sbjct: 712 PEVLYRIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIP----PELGNCVN 767
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
L ++ L N + + A L + E+L D I
Sbjct: 768 LRTLLLDGNPFR--------VPRAAILMKGTAAILEYLRDRI 801
>gi|398341354|ref|ZP_10526057.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
1051]
Length = 305
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+L++G N LT+L + L +L LNNN+L +L ++G L LQ L + NQL
Sbjct: 91 SLRELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTT 150
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP ++ L L ++N++T+L L L++ N+ N +T++ +E L L S
Sbjct: 151 LPKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTIL-PNEIGQLKKLLS 209
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ+T++ + L L LYL NQL + L +I LK LR + L +N++
Sbjct: 210 LNLTYNQLTTLPKEIGQLQSLRELYLGDNQL-KTLPKEIGQLKNLRELLLRHNQL 263
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT L + L +L L L NN+ +L ++G L L+ L + NQL
Sbjct: 43 PLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQL 102
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP ++ L NNN++T+L + L LQ ++ NQ+T + + E L NL
Sbjct: 103 TTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPK-EVGQLKNL 161
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL +N++T++ L L L LS N LT L ++I LK+L +++L+YN++
Sbjct: 162 YDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLT-ILPNEIGQLKKLLSLNLTYNQL 217
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L L ++G L LQ L + NQ LP++I L L
Sbjct: 36 LTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLREL 95
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +N++T+L + L LQVF ++ NQ+T + E L NL + L NNQ+T++
Sbjct: 96 YLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPA-EIGKLKNLQHLDLWNNQLTTLPKE 154
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L L L L N+LT L + LK LR ++LS N
Sbjct: 155 VGQLKNLYDLSLHDNKLTT-LPKETGQLKNLRMLNLSKN 192
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 24/140 (17%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L L +L L L+ N L L ++G L KL L + NQL LP +I
Sbjct: 169 NKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQ 228
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY +N++ +L E L NL + L++NQ+T
Sbjct: 229 SLRELYLGDNQLKTLP------------------------KEIGQLKNLRELLLRHNQLT 264
Query: 190 SMNSSLSGLTKLAYLYLSHN 209
++ + L KL +L L N
Sbjct: 265 TVPKEIGQLKKLRWLLLDAN 284
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LT L N + L L L L N+L +L ++G L L+ L + NQL+ L
Sbjct: 184 LRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTL 243
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
P +I L L +N++T++ + L KL+ +D N I
Sbjct: 244 PKEIGQLKNLRELLLRHNQLTTVPKEIGQLKKLRWLLLDANPI 286
>gi|328705607|ref|XP_003242855.1| PREDICTED: leucine-rich repeat-containing protein 15-like
[Acyrthosiphon pisum]
Length = 474
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 43/218 (19%)
Query: 61 TIRKLHVG-FNNLTSLNN--------------SLRGLTDLNWLFLNNNRLKSLE-GQLGT 104
TI + G FNNLTSL N +GLT LN L L+NN + +L G
Sbjct: 48 TIENIETGVFNNLTSLENLFLSSNQIHKLDFVQFKGLTSLNILTLDNNEISNLRNGAFAN 107
Query: 105 LSKLQLLVIEQNQLEALPS----------------------DIQLFS---QLGSLYANNN 139
LSKLQ L + N +E + + D+++F +L +L N N
Sbjct: 108 LSKLQSLSLIGNTIENIETEVFNNLTSLLSLSLKQNKIHKLDLEMFKGLIKLDTLDLNQN 167
Query: 140 RITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SG 197
I ++ G LT L V + N+I+ +R F NL NL ++ L N++ ++ S + +
Sbjct: 168 LIRNIAPGTFDSLTSLSVLTLSGNKISNLRNGAFANLSNLQTLVLSGNEMENIESGVFNN 227
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LT L YL+L +N++ + L +GL RL +DL YN I
Sbjct: 228 LTSLKYLFLGYNKIHKLDLVMFKGLTRLNLLDLCYNMI 265
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGL-LRGLTKLQVF 157
G LSKLQ L + N +E + + + + L +L+ ++N+I LD + +GLT L +
Sbjct: 31 GAFARLSKLQTLSLIGNTIENIETGVFNNLTSLENLFLSSNQIHKLDFVQFKGLTSLNIL 90
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLL 216
+D N+I+ +R F NL L S+SL N I ++ + + + LT L L L N++ + L
Sbjct: 91 TLDNNEISNLRNGAFANLSKLQSLSLIGNTIENIETEVFNNLTSLLSLSLKQNKIHKLDL 150
Query: 217 DDIRGLKRLRTVDLSYNKI 235
+ +GL +L T+DL+ N I
Sbjct: 151 EMFKGLIKLDTLDLNQNLI 169
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 82 LTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YAN 137
LT L+ L L+ N++ +L G LS LQ LV+ N++E + S + F+ L SL +
Sbjct: 180 LTSLSVLTLSGNKISNLRNGAFANLSNLQTLVLSGNEMENIESGV--FNNLTSLKYLFLG 237
Query: 138 NNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
N+I LD + +GLT+L + ++ +N I + F L +L + LQ+N +T
Sbjct: 238 YNKIHKLDLVMFKGLTRLNLLDLCYNMIRNIPPGIFDPLTSLSLLKLQHNPLTC 291
>gi|432941541|ref|XP_004082897.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 3-like [Oryzias latipes]
Length = 1096
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 13/222 (5%)
Query: 29 LTSDDLKGTPAL-------ITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSL 79
L +DLK P L TL+L NN I I + P ++ L + +NN+ +
Sbjct: 92 LNHNDLKEMPDLGPFASRITTLILANNKIARISQEQLGPFLSLETLDLSYNNIVEMKAGS 151
Query: 80 RGLTDLNWLFLNNNRLKSLE-GQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
L +FLNNNR+ S+E G LS LQ+L + +N+L A+ I L L +
Sbjct: 152 FPALPLRNMFLNNNRISSMETGCFANLSSTLQVLRLNRNRLSAITPKIFQLPSLQHLDLS 211
Query: 138 NNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-L 195
NRI ++GL GL L+ M N + + F L N++ + L NN +T + L
Sbjct: 212 RNRIRHVEGLTFLGLQSLRFLKMQRNGVVRLMDGAFWGLENVEVLQLDNNNLTVVTKRWL 271
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
GL L L+L HN + + ++L +DLS N + +
Sbjct: 272 YGLLTLQQLHLGHNAIGAIEPEAWDFCQKLSQLDLSSNHLTR 313
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 10/208 (4%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNR 94
P+L L L N I H+ F ++R L + N + L + + GL ++ L L+NN
Sbjct: 203 PSLQHLDLSRNRIRHVEGLTFLGLQSLRFLKMQRNGVVRLMDGAFWGLENVEVLQLDNNN 262
Query: 95 LKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGL 151
L + + L L LQ L + N + A+ + F Q L L ++N +T L+ GL
Sbjct: 263 LTVVTKRWLYGLLTLQQLHLGHNAIGAIEPEAWDFCQKLSQLDLSSNHLTRLEESSFVGL 322
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLS 207
+ L ++ N I+ + F+ L +L ++ L+NN+I+ MN S L L L+L
Sbjct: 323 SLLDELHIGNNSISFIADGAFRGLPSLKTLDLKNNEISWTIEDMNGPFSALHNLKRLFLH 382
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N++ GL L+ +DLS N I
Sbjct: 383 GNRIRSVTAKSFSGLDALQHLDLSRNAI 410
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ N++ + RD F NL NL I L +N + M +++ L L++N++ +
Sbjct: 67 DLSHNKLQTINRDLFSNLQNLSEIKLNHNDLKEMPDLGPFASRITTLILANNKIARISQE 126
Query: 218 DIRGLKRLRTVDLSYNKI 235
+ L T+DLSYN I
Sbjct: 127 QLGPFLSLETLDLSYNNI 144
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 88 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD- 145
L L NN++ + + QLG L+ L + N + + + L +++ NNNRI+S++
Sbjct: 113 LILANNKIARISQEQLGPFLSLETLDLSYNNIVEMKAGSFPALPLRNMFLNNNRISSMET 172
Query: 146 GLLRGLTK-LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 203
G L+ LQV ++ N+++ + FQ L +L + L N+I + + GL L +
Sbjct: 173 GCFANLSSTLQVLRLNRNRLSAITPKIFQ-LPSLQHLDLSRNRIRHVEGLTFLGLQSLRF 231
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L + N + + GL+ + + L N + R
Sbjct: 232 LKMQRNGVVRLMDGAFWGLENVEVLQLDNNNLTVVTKR 269
>gi|207080310|ref|NP_001128872.1| DKFZP459K227 protein [Pongo abelii]
gi|55731898|emb|CAH92658.1| hypothetical protein [Pongo abelii]
Length = 436
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPSSIKVLTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQL-PAEIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLS 297
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 28/196 (14%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 303 LAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKI 235
GL LR LSY I
Sbjct: 422 SGLVLLRF--LSYQTI 435
>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 595
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK++ ++G L
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGF---STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 423
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 484 PK-EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFT-VLPKEIGKLKKLQT 541
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 542 LDLRNNQLTTLPT 554
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N L ++ + + L +L L L N L+ L ++G L LQ L + QN L+
Sbjct: 401 LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIF 460
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I+ +L L + N+ T+ + L LQ N+ NQ+T + + + QNL LD
Sbjct: 461 PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELD 520
Query: 180 --------------------SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
++ L+NNQ+T++ + + L L +LYL +NQL+ + I
Sbjct: 521 LNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERI 580
Query: 220 RGLKRLRT 227
R L L+
Sbjct: 581 RKLLPLKC 588
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T + + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+L +NQ+ ++ + L L LYL +N+LT F
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T+L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + L L L N+LT L ++ L+ L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLQNLQTLNL 285
Query: 231 SYNKINKF 238
N++ F
Sbjct: 286 VNNRLTVF 293
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L +N+ +L ++G L LQ L + NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T + L LQ+ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK-EMGQLQNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + L L L L N L+
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 197
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L NQ T L +I L+ L+T++LS N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTT-LPKEIGQLQNLQTLNLSDNQL 221
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
>gi|395860100|ref|XP_003802353.1| PREDICTED: protein scribble homolog isoform 2 [Otolemur garnettii]
Length = 1641
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-PEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 400
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 25/174 (14%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+LH+ +N L +L+ + L +L L LN+N+LK+L ++G L LQ+L + NQ + +
Sbjct: 186 LRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTV 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I G L+ LQV ++ +NQ V +E L NL +
Sbjct: 246 PEEI--------------------GQLKN---LQVLDLGYNQFKTV-PEEIGQLKNLQML 281
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ ++ L L L L+ NQLT L ++IR LK LR + LSYN++
Sbjct: 282 FLNNNQFKTVPEETGQLKNLQMLSLNANQLTT-LPNEIRQLKNLRELHLSYNQL 334
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 8/184 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N LT+L + L +L L+LN N+LK+L ++G L LQ
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQ 165
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL+ LP +I L L+ + N++ +L + L LQV +++ NQ+ + +
Sbjct: 166 LNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK- 224
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L NNQ ++ + L L L L +NQ + + ++I LK L+ + L
Sbjct: 225 EIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQF-KTVPEEIGQLKNLQMLFL 283
Query: 231 SYNK 234
+ N+
Sbjct: 284 NNNQ 287
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L LNNN+L +L ++G L LQ L + NQL
Sbjct: 45 PLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQL 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I L +L + NR+T+L + L L+ ++ NQ+ + + E L NL
Sbjct: 105 TTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ+ ++ + L L L+LS+NQL + L +I L+ L+ +DL+ N++
Sbjct: 164 QQLNLYANQLKTLPKEIGQLQNLRELHLSYNQL-KTLSAEIGQLQNLQVLDLNDNQL 219
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N L +L + L +L L L+ N+L + ++G L LQ LV+ +N+L LP +
Sbjct: 74 LELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKE 133
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L LY N N++ +L + L LQ N+ NQ+ + + E L NL + L
Sbjct: 134 IGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYANQLKTLPK-EIGQLQNLRELHLS 192
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
NQ+ ++++ + L L L L+ NQL + L +I LK L+ +DL+ N+
Sbjct: 193 YNQLKTLSAEIGQLQNLQVLDLNDNQL-KTLPKEIGQLKNLQMLDLNNNQ 241
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ D+ L L+ +LK+L ++G L LQ+L + NQL LP +I L
Sbjct: 36 TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQ 95
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ + N++T+ + L LQ + N++T + + E L NL + L NQ+ ++
Sbjct: 96 ELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPK-EIGQLKNLRELYLNTNQLKTLP 154
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQL + L +I L+ LR + LSYN++
Sbjct: 155 KEIGQLKNLQQLNLYANQL-KTLPKEIGQLQNLRELHLSYNQL 196
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G+N ++ + L +L LFLNNN+ K++ + G L LQ+L + NQL LP++
Sbjct: 258 LDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNE 317
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
I+ L L+ + N++ +L + L L+ ++ NQ+T + ++
Sbjct: 318 IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKE 363
>gi|298709830|emb|CBJ31628.1| Putative Leucine Rich Repeat Protein [Ectocarpus siliculosus]
Length = 984
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 111/204 (54%), Gaps = 7/204 (3%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLT-SLNNSLRGLTDLNWLFLNNNRLK 96
L TL L N IT A ++ L + N LT S+ L GL L L+LN N+L
Sbjct: 92 LETLWLNGNEITGTIPEALGGLSELKNLSMSANKLTGSIPRKLGGLGKLEELYLNGNQLS 151
Query: 97 -SLEGQLGTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRIT-SLDGLLRGLTK 153
S+ G+LG L K+Q+L ++ NQL +P + +L +L ++N++T S+ G+L GL +
Sbjct: 152 GSIPGELGGLGKVQILRLDGNQLSGPIPEALGALRELKNLDMSDNKLTGSIPGVLGGLGE 211
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-SMNSSLSGLTKLAYLYLSHNQLT 212
L++ ++ N ++ E L + + L NQ+T ++ +L GL++L L +S N+LT
Sbjct: 212 LKILFLNDNHLSGSIPGELGGLGKVHILRLDGNQLTGTIPEALGGLSELKNLSMSANKLT 271
Query: 213 EFLLDDIRGLKRLRTVDLSYNKIN 236
+ + GL +L + L N+++
Sbjct: 272 GSIPRKLGGLGKLEELCLYGNQLS 295
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 121 LPSDIQLFSQLGSLYANNNRIT-SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P + S+L L+ ++N++T S+ L L KL+ ++ N+IT + L L
Sbjct: 58 IPEALGALSELKKLFVHDNKVTGSIPRELGRLGKLETLWLNGNEITGTIPEALGGLSELK 117
Query: 180 SISLQNNQIT-SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
++S+ N++T S+ L GL KL LYL+ NQL+ + ++ GL +++ + L N+++
Sbjct: 118 NLSMSANKLTGSIPRKLGGLGKLEELYLNGNQLSGSIPGELGGLGKVQILRLDGNQLS 175
>gi|260788682|ref|XP_002589378.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
gi|229274555|gb|EEN45389.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
Length = 1059
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 41 ITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
+ LL V NN + FPP + RKL++ N LT + +S+ L +L L + NN+
Sbjct: 296 LELLTVGNNKL----SKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNK 351
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
L + + L KL+ L I+ NQL +PS + L L NN++++ + L KL
Sbjct: 352 LSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQKL 411
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ + NQ+T V +L +L+ +++ NN+++ + L KL LY+ NQLTE
Sbjct: 412 RELYIQDNQLTEVPSG-VCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTE- 469
Query: 215 LLDDIRGLKRLRTVDLSYNKINKF 238
+ + L L + + NK++ F
Sbjct: 470 VPSSVCSLPNLEVLSVYNNKLSTF 493
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 8/189 (4%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ FPP + R+L++ N LT + + + L L L + NN+L + L KL+
Sbjct: 261 STFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSKFPPGVEKLQKLR 320
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L I NQL +PS + L L NN++++ + L KL+ + NQ+T V
Sbjct: 321 KLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPS 380
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+L +L+ +S+ NN++++ + L KL LY+ NQLTE + + L L +
Sbjct: 381 G-VCSLPHLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTE-VPSGVCSLPHLELLT 438
Query: 230 LSYNKINKF 238
+ NK++KF
Sbjct: 439 VGNNKLSKF 447
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L + N +T + P + +L V N L++ + L L L++ +N+L +
Sbjct: 156 LYIYGNQLTEVPSGVCSLPNLEELDVSNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSG 215
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY-----ANNNRITSLDGLLRGLTKLQV 156
+ +L L+LL + N+L A P ++ +L LY +NN++++ + L KL+
Sbjct: 216 VCSLPHLELLTVGNNKLSAFPPGVEKLQKLRELYIYGVKCHNNKLSTFPPGVEKLQKLRE 275
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ NQ+T V +L +L+ +++ NN+++ + L KL LY+ NQLTE +
Sbjct: 276 LYIQDNQLTEVPSG-VCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTE-VP 333
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+ L L + + NK++ F
Sbjct: 334 SSVCSLPNLEVLSVYNNKLSTF 355
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + LTS+ + +TDL L ++NN++ S+ + L KL L N L +LP
Sbjct: 17 KLDLSNQGLTSIPEEVFDITDLEILDVSNNKIISIPEAICRLQKLYRLDAYSNMLTSLPQ 76
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I L LY ++N ++ L L L KL+ + N++T + F L NL +
Sbjct: 77 AISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTKLPTKIFSCL-NLVNFDA 135
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NN++++ + L KL LY+ NQLTE + + L L +D+S NK++ F
Sbjct: 136 SNNKLSAFPPGVEKLQKLRELYIYGNQLTE-VPSGVCSLPNLEELDVSNNKLSTF 189
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL+V NNL+ L + L L L WL++ +N+L L ++ + L N+L A
Sbjct: 84 LKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTKLPTKIFSCLNLVNFDASNNKLSAF 143
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ +L LY N++T + + L L+ ++ N+++ + L L +
Sbjct: 144 PPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEELDVSNNKLSTFPPG-VEKLQKLREL 202
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT-----VDLSYNKIN 236
+Q+NQ+T + S + L L L + +N+L+ F + L++LR V NK++
Sbjct: 203 YIQDNQLTEVPSGVCSLPHLELLTVGNNKLSAF-PPGVEKLQKLRELYIYGVKCHNNKLS 261
Query: 237 KF 238
F
Sbjct: 262 TF 263
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 41/236 (17%)
Query: 38 PALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NN ++ FPP + R+L++ N LT + + + L L L +
Sbjct: 386 PHLEVLSVYNNKLS-----TFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVG 440
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
NN+L + L KL+ L I NQL +PS + L L NN++++ + L
Sbjct: 441 NNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKL 500
Query: 152 TKLQVFNMDFNQITMVRR-------------------------DEFQNLHNLDSISLQNN 186
KL+ ++ +Q R DE NL +L ++L+NN
Sbjct: 501 QKLKSLSVPASQFDEFPRQVLQLKTLEELYAGQAGGRKFDIVPDEVGNLQHLWFLALENN 560
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEF--LLDDIRGLKRLRTVDLSYNKINKFGT 240
+ ++ S++S L L + L +N+ F +L ++ +++L D+ N I + T
Sbjct: 561 LLRTLPSTMSHLHNLRVVQLWNNKFDTFPEVLCELPAMEKL---DIRNNNITRLPT 613
>gi|440754490|ref|ZP_20933692.1| small GTP-binding domain protein [Microcystis aeruginosa TAIHU98]
gi|440174696|gb|ELP54065.1| small GTP-binding domain protein [Microcystis aeruginosa TAIHU98]
Length = 852
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + NLT + + LT L L+L+NN+++ + L L+ LQ+L++ NQ+ +P
Sbjct: 20 KLDLSNKNLTEIPPEIPHLTSLQHLYLSNNQIREIPEALAHLTPLQVLLLSDNQIREIPE 79
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L L + N+I+ + L LT L + +NQI + + +L +L + L
Sbjct: 80 ALAQLTSLQYLDLSYNQISEIPEALAHLTSLLGLGLSYNQIREI-PEALTHLTSLQFLYL 138
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NNQI + +L+ LT L +LYLS+NQ+ E + + + L L+ + LSYN+I +
Sbjct: 139 SNNQIREIPEALAHLTSLQFLYLSNNQIRE-IPEALAQLTSLQYLFLSYNQIREI 192
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 14/189 (7%)
Query: 45 LVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L N N+T I PP I + L++ N + + +L LT L L L++N+++ +
Sbjct: 23 LSNKNLTEI-----PPEIPHLTSLQHLYLSNNQIREIPEALAHLTPLQVLLLSDNQIREI 77
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
L L+ LQ L + NQ+ +P + + L L + N+I + L LT LQ
Sbjct: 78 PEALAQLTSLQYLDLSYNQISEIPEALAHLTSLLGLGLSYNQIREIPEALTHLTSLQFLY 137
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--LL 216
+ NQI + + +L +L + L NNQI + +L+ LT L YL+LS+NQ+ E L
Sbjct: 138 LSNNQIREI-PEALAHLTSLQFLYLSNNQIREIPEALAQLTSLQYLFLSYNQIREIPEAL 196
Query: 217 DDIRGLKRL 225
+ LKRL
Sbjct: 197 AHLVNLKRL 205
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 37 TPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
TP L LLL +N I I E A +++ L + +N ++ + +L LT L L L+ N++
Sbjct: 62 TP-LQVLLLSDNQIREIPEALAQLTSLQYLDLSYNQISEIPEALAHLTSLLGLGLSYNQI 120
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
+ + L L+ LQ L + NQ+ +P + + L LY +NN+I + L LT LQ
Sbjct: 121 REIPEALTHLTSLQFLYLSNNQIREIPEALAHLTSLQFLYLSNNQIREIPEALAQLTSLQ 180
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+ +NQI + + +L NL + L+NN IT++ +
Sbjct: 181 YLFLSYNQIREI-PEALAHLVNLKRLVLENNPITNVPPEI 219
>gi|429962151|gb|ELA41695.1| hypothetical protein VICG_01328 [Vittaforma corneae ATCC 50505]
Length = 318
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
++ + + +TS+ ++++ L L L L+NNRLKSL ++G L LQ L + N+ E+LP+
Sbjct: 45 EVSIQYQGITSIGSNIKRLAKLEKLDLSNNRLKSLPDEIGELKNLQHLDLSYNEFESLPA 104
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I L L +NN++ L ++R L L++ + N++ ++ E L L + L
Sbjct: 105 VIWELKNLRYLDLSNNKLGILPTVIRKLKNLEILYLSNNKLELLPA-EIVELEKLQYLYL 163
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N++T + + GL L +L+L++N+L E L +IR L++L+ + + N++
Sbjct: 164 GGNRLTLLPVGIGGLKNLQWLHLNYNKL-EILPSEIRRLEKLQYLYIRGNRL 214
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N SL + L +L +L L+NN+L L + L L++L + N+LE L
Sbjct: 89 LQHLDLSYNEFESLPAVIWELKNLRYLDLSNNKLGILPTVIRKLKNLEILYLSNNKLELL 148
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I +L LY NR+T L + GL LQ ++++N++ ++ E + L L +
Sbjct: 149 PAEIVELEKLQYLYLGGNRLTLLPVGIGGLKNLQWLHLNYNKLEIL-PSEIRRLEKLQYL 207
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N++T + + L L L L+ N+L E L +I LK LRT+ L YNK+
Sbjct: 208 YIRGNRLTLLPIEVGQLGSLQELGLNGNEL-ETLPVEIGKLKNLRTLHLGYNKL 260
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ +N L L + +R L L +L++ NRL L ++G L LQ L + N+LE LP +
Sbjct: 184 LHLNYNKLEILPSEIRRLEKLQYLYIRGNRLTLLPIEVGQLGSLQELGLNGNELETLPVE 243
Query: 125 IQLFSQLGSLYANNNRITSL 144
I L +L+ N++ +L
Sbjct: 244 IGKLKNLRTLHLGYNKLETL 263
>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 595
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK++ ++G L
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGF---STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 423
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 484 PK-EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFT-VLPKEIGKLKKLQT 541
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 542 LDLRNNQLTTLPT 554
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N L ++ + + L +L L L N L+ L ++G L LQ L + QN L+
Sbjct: 401 LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIF 460
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I+ +L L + N+ T+ + L LQ N+ NQ+T + + + QNL LD
Sbjct: 461 PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELD 520
Query: 180 --------------------SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
++ L+NNQ+T++ + + L L +LYL +NQL+ + I
Sbjct: 521 LNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERI 580
Query: 220 RGLKRLRT 227
R L L+
Sbjct: 581 RKLLPLKC 588
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T++ + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+L +NQ+ ++ + L L LYL +N+LT F
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVF 247
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + L L L N+LT L ++ L+ L+T++L
Sbjct: 227 EIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLQNLQTLNL 285
Query: 231 SYNKINKF 238
N++ F
Sbjct: 286 VNNRLTVF 293
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L NQ T L +I L+ L+T++LS N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT-ILPKEIGQLQNLQTLNLSDNQL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L +N+ L ++G L LQ L + NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T + L LQ+ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK-EMGQLQNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + L L L L N L+
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 197
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T + L LQ + N +++ R Q L NL
Sbjct: 271 PKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
>gi|345782689|ref|XP_540333.3| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 2
[Canis lupus familiaris]
Length = 1069
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ F P + L + N ++ + S L +L L+NNR+
Sbjct: 126 ITLLSLVHNIIPEINAEVFQFYPALENLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITI 185
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 186 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKVVEGLTFQGLDSL 245
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L N++ + L++N +T +N L GL L LY+S N +
Sbjct: 246 RSLKMQRNGISRLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAVER 305
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 306 ISPDAWEFCQRLSELDLSYNQLTRL 330
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 244 SLRSLKMQRNGISRLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAV 303
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 304 ERISPDAWEFCQRLSELDLSYNQLTRLDKSAFVGLSLLERLNLGDNRVTHIADGVFRFLS 363
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL +++L+NN+I+ + + SGLT L L L NQ+ GL+ L +DL+
Sbjct: 364 NLQTLNLRNNEISWAIEDASEAFSGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 423
Query: 233 NKI 235
N I
Sbjct: 424 NAI 426
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 37/213 (17%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
+G +L +L + N I+ + + AF + +L + NNLT +N L GL L L++
Sbjct: 239 FQGLDSLRSLKMQRNGISRLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYV 298
Query: 91 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQLF---SQLGSLYANNNRITSL-D 145
+ N ++ + +L L + NQL L D F S L L +NR+T + D
Sbjct: 299 SQNAVERISPDAWEFCQRLSELDLSYNQLTRL--DKSAFVGLSLLERLNLGDNRVTHIAD 356
Query: 146 GLLRGLTKLQVFNM---------------------------DFNQITMVRRDEFQNLHNL 178
G+ R L+ LQ N+ NQI + + F L +L
Sbjct: 357 GVFRFLSNLQTLNLRNNEISWAIEDASEAFSGLTSLTKLILQGNQIKSITKKAFIGLESL 416
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ + L NN I S+ + T+L L L+ + L
Sbjct: 417 EHLDLNNNAIMSIQENAFSQTRLKELILNTSSL 449
>gi|224052809|ref|XP_002197870.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Taeniopygia guttata]
Length = 582
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L ++++ LT L L+L +N+L+ L ++G L L L + +N L +LP + +L L
Sbjct: 115 LPSAIKELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRML 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L+ L + FN+IT V +D +NL L +S++ N+I + +
Sbjct: 175 DLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L ++I ++ +DL +N++
Sbjct: 234 IGELCNLITLDVAHNQL-EHLPEEIGSCTQITNLDLQHNEL 273
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L++ FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE
Sbjct: 193 SLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I +Q+ +L +N + L + L+ L + +N+++ + + LD
Sbjct: 253 LPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKS-LAKCSELDE 311
Query: 181 ISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK-- 237
++L+NN I+++ LS L KL L L+ N + + + ++++ +N+INK
Sbjct: 312 LNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIP 371
Query: 238 FGTRNEGK 245
FG + K
Sbjct: 372 FGIFSRAK 379
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L L + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ S L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L + I L L + L YN+++
Sbjct: 246 AHNQLEHLPEEIGSCTQITNLDLQHNELLD-LPETIGNLSSLSRLGLRYNRLSAI 299
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+++ SL ++L+ L L NN + +L EG L +L KL L + +N +
Sbjct: 285 SLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQ 344
Query: 120 ALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+ P FS + SL +NRI + G+ L NM NQ+T + D F +
Sbjct: 345 SYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTS 403
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+T + +SGL L L LS+N L + L I L++LR +DL NK+
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKK-LPHGIGNLRKLRELDLEENKL 460
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L +G L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + T + L L +N L L +G LS L L + N+L A+P
Sbjct: 243 LDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKS 302
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVF------------------------NM 159
+ S+L L NN I++L +GLL L KL NM
Sbjct: 303 LAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNM 362
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 421
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 422 SGLVSLEVLILSNNLLKKL 440
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|320169700|gb|EFW46599.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
Length = 1026
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
L ++ G +L + L NNNIT+I F ++ + + +N LTSL+ N+ GLT L
Sbjct: 78 LATNAFTGLTSLTQVTLQNNNITNIVATTFTGLSSVTQTDLSYNKLTSLSANAFTGLTAL 137
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITS 143
L L+ N++ S+ L+ L L + N + +PS + L +L N T+
Sbjct: 138 AQLDLSMNQITSIHATAFSDLTALTQLSLTNNIIRTIPSSAFTGLTALNTLNLGGNLFTA 197
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ GL+ L ++ IT++ + F L L ++LQ+NQI ++ + + +GLT L
Sbjct: 198 IPANAFTGLSALNYLSLFACLITVISANAFTGLTALTFLTLQSNQILNIPANAFAGLTAL 257
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+LYLS Q+T + L L +DLSYN I
Sbjct: 258 QFLYLSSAQITSLSANAFTDLSALTQLDLSYNMITS 293
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+ S G AL TL L N T I NAF + L + +T ++ N+ GLT L
Sbjct: 174 IPSSAFTGLTALNTLNLGGNLFTAIPANAFTGLSALNYLSLFACLITVISANAFTGLTAL 233
Query: 86 NWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPS----DIQLFSQLGSLYANNNR 140
+L L +N++ ++ L+ LQ L + Q+ +L + D+ +QL Y N
Sbjct: 234 TFLTLQSNQILNIPANAFAGLTALQFLYLSSAQITSLSANAFTDLSALTQLDLSY---NM 290
Query: 141 ITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGL 198
ITSL GL+ L ++ +N IT + + F L L + L NQITS+ + + +GL
Sbjct: 291 ITSLSANTFTGLSALTRLDLSYNMITSLSANTFTGLSALTQLYLFENQITSIPADAFAGL 350
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
T L L+L NQ+T D GL L ++LS+ +I
Sbjct: 351 TALTQLFLFENQITSIPADAFAGLTALTQLELSHTRITS 389
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSL-YAN--NNRITSLDG-LLRGLTKLQVFNMD 160
L+ LQ L + NQL + Q F+ L +L Y + NNRIT + G L GLT L ++
Sbjct: 14 LTALQYLELSYNQLTGI--SAQAFTGLTALNYLDLSNNRITKIPGSLFTGLTMLTTLSLQ 71
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
FN IT + + F L +L ++LQNN IT++ ++ +GL+ + LS+N+LT +
Sbjct: 72 FNHITSLATNAFTGLTSLTQVTLQNNNITNIVATTFTGLSSVTQTDLSYNKLTSLSANAF 131
Query: 220 RGLKRLRTVDLSYNKINK 237
GL L +DLS N+I
Sbjct: 132 TGLTALAQLDLSMNQITS 149
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLN-----------N 77
+ ++ G AL L L IT I NAF G LT L N
Sbjct: 198 IPANAFTGLSALNYLSLFACLITVISANAF--------TGLTALTFLTLQSNQILNIPAN 249
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLY 135
+ GLT L +L+L++ ++ SL T LS L L + N + +L ++ S L L
Sbjct: 250 AFAGLTALQFLYLSSAQITSLSANAFTDLSALTQLDLSYNMITSLSANTFTGLSALTRLD 309
Query: 136 ANNNRITSLDG----LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
+ N ITSL L LT+L +F NQIT + D F L L + L NQITS+
Sbjct: 310 LSYNMITSLSANTFTGLSALTQLYLFE---NQITSIPADAFAGLTALTQLFLFENQITSI 366
Query: 192 NS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ + +GLT L L LSH ++T + RGL L + L ++N
Sbjct: 367 PADAFAGLTALTQLELSHTRITSISANAFRGLTALTALYLHSVQLNS 413
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 53 IHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGT-LSKL 108
I NAF ++ L + +N LT ++ + GLT LN+L L+NNR+ + G L T L+ L
Sbjct: 6 IPANAFAGLTALQYLELSYNQLTGISAQAFTGLTALNYLDLSNNRITKIPGSLFTGLTML 65
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSLDG-LLRGLTKLQVFNMDFNQI 164
L ++ N + +L ++ F+ L SL NN IT++ GL+ + ++ +N++
Sbjct: 66 TTLSLQFNHITSLATNA--FTGLTSLTQVTLQNNNITNIVATTFTGLSSVTQTDLSYNKL 123
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
T + + F L L + L NQITS+++ + S LT L L L++N + GL
Sbjct: 124 TSLSANAFTGLTALAQLDLSMNQITSIHATAFSDLTALTQLSLTNNIIRTIPSSAFTGLT 183
Query: 224 RLRTVDLSYN 233
L T++L N
Sbjct: 184 ALNTLNLGGN 193
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 30/205 (14%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+ ++ G AL L L + IT + NAF + +L + +N +TSL+ N+ GL+ L
Sbjct: 246 IPANAFAGLTALQFLYLSSAQITSLSANAFTDLSALTQLDLSYNMITSLSANTFTGLSAL 305
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+ N + SL T LS L L + +NQ+ ++P+D +
Sbjct: 306 TRLDLSYNMITSLSANTFTGLSALTQLYLFENQITSIPAD------------------AF 347
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 203
GL LT+L +F NQIT + D F L L + L + +ITS+++ + GLT L
Sbjct: 348 AGL-TALTQLFLFE---NQITSIPADAFAGLTALTQLELSHTRITSISANAFRGLTALTA 403
Query: 204 LYLSHNQLTEF---LLDDIRGLKRL 225
LYL QL D+ L+RL
Sbjct: 404 LYLHSVQLNSIPANAFTDLPTLQRL 428
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSH 208
GLT LQ + +NQ+T + F L L+ + L NN+IT + SL +GLT L L L
Sbjct: 13 GLTALQYLELSYNQLTGISAQAFTGLTALNYLDLSNNRITKIPGSLFTGLTMLTTLSLQF 72
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N +T + GL L V L N I
Sbjct: 73 NHITSLATNAFTGLTSLTQVTLQNNNI 99
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
Q+ + + F L L + L NQ+T +++ + +GLT L YL LS+N++T+ G
Sbjct: 2 QLISIPANAFAGLTALQYLELSYNQLTGISAQAFTGLTALNYLDLSNNRITKIPGSLFTG 61
Query: 222 LKRLRTVDLSYNKINKFGT 240
L L T+ L +N I T
Sbjct: 62 LTMLTTLSLQFNHITSLAT 80
>gi|359072211|ref|XP_003586927.1| PREDICTED: protein scribble homolog isoform 1 [Bos taurus]
Length = 1631
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|281351189|gb|EFB26773.1| hypothetical protein PANDA_002548 [Ailuropoda melanoleuca]
Length = 941
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 77/264 (29%), Positives = 111/264 (42%), Gaps = 45/264 (17%)
Query: 16 NLIDLEPETGSHPLTS------DD----------LKGTPALITLLLVNNNITHIHENAFP 59
NLI L PE L+S DD L PAL + L N I+HI + AF
Sbjct: 122 NLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQ 181
Query: 60 --PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
++ LH+ N++ L +S GL +L L LN N L+ + TL +LQ L N
Sbjct: 182 NLTSLVVLHLHNNHIQHLGTHSFDGLHNLETLDLNYNELQEFPVAIRTLGRLQELGFHNN 241
Query: 117 QLEALPSD-----------------IQLFSQLGSLYANNNRITSLDGL--------LRGL 151
++A+P IQ + Y SL+G L+G
Sbjct: 242 NIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLNGATDIQEFPDLKGT 301
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
T L++ + I ++ Q L L ++ L +NQI + SL KL + L HN++
Sbjct: 302 TSLEILTLTRAGIRLLPPGMCQQLPRLRALELSHNQIEEL-PSLHRCQKLEEIGLQHNRI 360
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
E D L LR +DLS+N I
Sbjct: 361 WEIGADTFSQLSSLRALDLSWNAI 384
Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 47 NNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNN-NRLKSLEGQL 102
NNNI I E AF P ++ +H N + + S + L L+ L LN ++
Sbjct: 240 NNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLNGATDIQEFPDLK 299
Query: 103 GTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
GT S L++L + + + LP + Q +L +L ++N+I L L R KL+ +
Sbjct: 300 GTTS-LEILTLTRAGIRLLPPGMCQQLPRLRALELSHNQIEELPSLHR-CQKLEEIGLQH 357
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N+I + D F L +L ++ L N I S++ + L L L L+ NQL L +
Sbjct: 358 NRIWEIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLAALPLAGLG 417
Query: 221 GLKRLR 226
GL L+
Sbjct: 418 GLMHLK 423
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 26/241 (10%)
Query: 19 DLEPETGSHPLTSDDLKG-TPALI-------TLLLVNNNITHIHENAFPP--TIRKLHVG 68
DL+P T L+ ++L P L L L N+++HI AF +++ L +
Sbjct: 37 DLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQ 96
Query: 69 FNNLTSL-NNSLRGLTDLNWLFLNNNRL-----KSLEGQLGTLSKLQLLVIEQNQLEALP 122
N L + +L L L L L+ N + +S EG LS L+ L ++ N L +P
Sbjct: 97 NNQLGGIPAEALWELPSLQSLRLDANLISLVPERSFEG----LSSLRHLWLDDNALTEIP 152
Query: 123 SDIQLFSQLGSLYANN---NRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
++ + L +L A NRI+ + D + LT L V ++ N I + F LHNL
Sbjct: 153 --VRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNHIQHLGTHSFDGLHNL 210
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+++ L N++ ++ L +L L +N + G L+T+ N I
Sbjct: 211 ETLDLNYNELQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFV 270
Query: 239 G 239
G
Sbjct: 271 G 271
>gi|359072215|ref|XP_003586928.1| PREDICTED: protein scribble homolog isoform 2 [Bos taurus]
Length = 1606
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|255079004|ref|XP_002503082.1| predicted protein [Micromonas sp. RCC299]
gi|226518348|gb|ACO64340.1| predicted protein [Micromonas sp. RCC299]
Length = 333
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
Query: 47 NNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
NN +T + +P T + KLH+ N LT+L + DL L L+ N+L +L ++G L
Sbjct: 192 NNQLTSLPLENWPATYLEKLHLSGNKLTTLPAKIGQFKDLWLLDLSRNQLTTLPAEIGQL 251
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ LQ+L + N+L +LP++I + L LY + N +TSL + LT L++ ++ +NQ+T
Sbjct: 252 TSLQVLRLLVNKLTSLPAEIGQLASLRKLYLSWNELTSLPAEIGQLTSLEMLDLQYNQLT 311
Query: 166 MVRRDEFQNLHNLDSISLQNNQI 188
V DE L +L+ + L NQ+
Sbjct: 312 SV-PDEIGQLTSLELLGLGENQL 333
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 39 ALITLLLVNNNITHIH-ENAFPPTIRKLHVG---FNNLTSLNNSLRGLTDLNWLFLNNNR 94
+LI L L N +T ++ E A ++ LHVG ++LTSL + LT L L+L+NN+
Sbjct: 66 SLILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNK 125
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
L L ++ L +L L ++ N+L LP +I F LG L ++N++T+L + + L
Sbjct: 126 LTDLPAEIVQLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTL 185
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ N+D NQ+T + + + + L+ + L N++T++ + + L L LS NQLT
Sbjct: 186 GLLNLDNNQLTSLPLENWPATY-LEKLHLSGNKLTTLPAKIGQFKDLWLLDLSRNQLTT- 243
Query: 215 LLDDIRGLKRLRTVDLSYNKINKF 238
L +I L L+ + L NK+
Sbjct: 244 LPAEIGQLTSLQVLRLLVNKLTSL 267
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 3/198 (1%)
Query: 39 ALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L L L NN +T + + +L++ N LT+L + DL L L++N+L +
Sbjct: 115 SLTELYLDNNKLTDLPAEIVQLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTT 174
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L ++G + L LL ++ NQL +LP + + L L+ + N++T+L + L +
Sbjct: 175 LPAEIGQIYTLGLLNLDNNQLTSLPLENWPATYLEKLHLSGNKLTTLPAKIGQFKDLWLL 234
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ NQ+T + E L +L + L N++TS+ + + L L LYLS N+LT L
Sbjct: 235 DLSRNQLTTLPA-EIGQLTSLQVLRLLVNKLTSLPAEIGQLASLRKLYLSWNELTS-LPA 292
Query: 218 DIRGLKRLRTVDLSYNKI 235
+I L L +DL YN++
Sbjct: 293 EIGQLTSLEMLDLQYNQL 310
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L + N L +L + + LT L L LN+NRL+SL ++G L+ L LL + NQL +L
Sbjct: 21 LSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEEVGFLASLILLDLSGNQLTSL 80
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGL---LRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+++ LG L+ NN+++SL L + LT L +D N++T + + Q L L
Sbjct: 81 NAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLTDLPAEIVQ-LERL 139
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ ++L NN++T++ + L L LSHNQLT
Sbjct: 140 NRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLT 173
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 34 LKGTPALI-------TLLLVNNNI-THIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDL 85
LK PA I TL L N + T E F +++ L + N L SL + L L
Sbjct: 8 LKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEEVGFLASL 67
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE---ALPSDIQLFSQLGSLYANNNRIT 142
L L+ N+L SL +L L L L + NQL +LP++I + L LY +NN++T
Sbjct: 68 ILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLT 127
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L +L N+D N++T + E +L ++L +NQ+T++ + + + L
Sbjct: 128 DLPAEIVQLERLNRLNLDNNKLTTL-PPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLG 186
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L L +NQLT L++ L + LS NK+ +
Sbjct: 187 LLNLDNNQLTSLPLENWPA-TYLEKLHLSGNKLTTLPAK 224
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 93/176 (52%), Gaps = 3/176 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + + L SL + L+DL+ L L N L +L ++G L+ L++L + N+L +LP +
Sbjct: 1 LDLSYCGLKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEE 60
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR--DEFQNLHNLDSIS 182
+ + L L + N++TSL+ L L L ++ NQ++ + E L +L +
Sbjct: 61 VGFLASLILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELY 120
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NN++T + + + L +L L L +N+LT L +I + L + LS+N++
Sbjct: 121 LDNNKLTDLPAEIVQLERLNRLNLDNNKLTT-LPPEIGQFRDLGELTLSHNQLTTL 175
>gi|242006348|ref|XP_002424013.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
corporis]
gi|212507305|gb|EEB11275.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
corporis]
Length = 608
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + +++T L +S+R LT L +L N+L SL ++G L LQ L + +N L +L
Sbjct: 125 VSRLDLSKSSITQLPSSVRDLTHLEEFYLYGNKLYSLPSEIGCLVNLQTLALSENSLTSL 184
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + L L +N++ + ++ LT L + FN+I +V D+ +NL NL +
Sbjct: 185 PESLVSLKSLKVLDLRHNKLNEIPEVVYKLTTLTTLFLRFNRIRVV-DDDIRNLSNLTML 243
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + + L L +SHNQL E L +I +L T+DL +N++
Sbjct: 244 SLRENKIKELPPGIGCLINLTTFDVSHNQL-EHLPIEIGQCVQLSTLDLQHNEL 296
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 24/146 (16%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N LT + ++ L L L L+NN LK + +G L KL++L +E+N++E LP+
Sbjct: 429 ELNLATNKLTKIPEDIQCLESLEVLILSNNMLKRIPAGMGNLRKLRILDLEENRIEVLPN 488
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I G LR LTKL + + NQI+++ R +L +L +S+
Sbjct: 489 EI--------------------GFLRDLTKLIIHS---NQISVLPR-AIGHLSSLVYLSV 524
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHN 209
+N +TS+ + L KL LY++ N
Sbjct: 525 GDNNLTSLPEEIGTLEKLESLYVNDN 550
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
+L L + N+L SL +GT + + L + N+L +P DIQ L L +NN +
Sbjct: 403 NLAKLNMKENQLTSLPLDIGTWTNMVELNLATNKLTKIPEDIQCLESLEVLILSNNMLKR 462
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ + L KL++ +++ N+I V +E L +L + + +NQI+ + ++ L+ L Y
Sbjct: 463 IPAGMGNLRKLRILDLEENRIE-VLPNEIGFLRDLTKLIIHSNQISVLPRAIGHLSSLVY 521
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTV 228
L + N LT L ++I L++L ++
Sbjct: 522 LSVGDNNLTS-LPEEIGTLEKLESL 545
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 30/168 (17%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI--- 125
FN + +++ +R L++L L L N++K L +G L L + NQLE LP +I
Sbjct: 224 FNRIRVVDDDIRNLSNLTMLSLRENKIKELPPGIGCLINLTTFDVSHNQLEHLPIEIGQC 283
Query: 126 -----------------------QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
QL ++LG Y NR+ ++ L +++ FN++ N
Sbjct: 284 VQLSTLDLQHNELLDIPETIGNLQLLTRLGLRY---NRLVTVPKSLCNCSRMDEFNVEGN 340
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHN 209
I+ + +L +L +I++ N +TS S + T + + L HN
Sbjct: 341 SISNLPEGLLASLSDLTAITISRNNMTSYPSGGPAQFTNVHSINLEHN 388
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 16 NLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV---GFNNL 72
N+++L T +D++ +L L+L NN + I A +RKL + N +
Sbjct: 426 NMVELNLATNKLTKIPEDIQCLESLEVLILSNNMLKRIP--AGMGNLRKLRILDLEENRI 483
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
L N + L DL L +++N++ L +G LS L L + N L +LP +I +L
Sbjct: 484 EVLPNEIGFLRDLTKLIIHSNQISVLPRAIGHLSSLVYLSVGDNNLTSLPEEIGTLEKLE 543
Query: 133 SLYANNN 139
SLY N+N
Sbjct: 544 SLYVNDN 550
>gi|395860098|ref|XP_003802352.1| PREDICTED: protein scribble homolog isoform 1 [Otolemur garnettii]
Length = 1616
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-PEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|355672534|gb|AER95058.1| biglycan [Mustela putorius furo]
Length = 371
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 109 LRRDDFKGLQHLYALVLVNNKISKIHEKAFGPLRKLQKLYISKNHLVEIPPNLPSSLVEL 168
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL +N + + N L++ + G L+L L I + +L +P
Sbjct: 169 RIHDNRIRKVPKGVFSGLRHMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 228
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++NRI + L+ LLR +KL + NQI M+ L L
Sbjct: 229 KDLP--ETLNELHLDHNRIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 285
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 286 LHLDNNKLSKVPSGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR-----AYYNGIS 340
Query: 237 KF 238
F
Sbjct: 341 LF 342
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 70 NNLTSLN-NSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E G L KLQ L I +N L +P ++
Sbjct: 104 NDISELRRDDFKGLQHLYALVLVNNKISKIHEKAFGPLRKLQKLYISKNHLVEIPPNLP- 162
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 163 -SSLVELRIHDNRIRKVPKGVFSGLRHMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 220
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 221 EAKLTGIPKDLP--ETLNELHLDHNRIQAIELEDLLRYSKLYRLGLGHNQI 269
>gi|427706829|ref|YP_007049206.1| small GTP-binding protein [Nostoc sp. PCC 7107]
gi|427359334|gb|AFY42056.1| small GTP-binding protein [Nostoc sp. PCC 7107]
Length = 925
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN IT I + T + +L++ +N ++ + ++ LT+L L L+NN++ +
Sbjct: 41 LTGLYLHNNKITEIPQVIANLTNLIQLNLSYNQISEIPEAITQLTNLRLLSLSNNQVSEI 100
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L+ L+LL + NQ+ +P +I + L L NN+IT + + LT L+
Sbjct: 101 PEEIAQLTNLRLLSLNNNQISEIPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELY 160
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQI+ + +E L NL + L +NQIT + +++ LT L LYLS NQ+TE + +
Sbjct: 161 LSNNQISEI-PEEIAQLTNLRLLYLSDNQITEIPEAITQLTNLTDLYLSDNQITE-IPEA 218
Query: 219 IRGLKRLRTVDLSYNKINKF 238
I L LR +DL N+I +
Sbjct: 219 ITQLTNLRQLDLGGNQITEI 238
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 104/184 (56%), Gaps = 2/184 (1%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE 114
E A R+L + N LT + ++ LT+L L+L+NN++ + + L+ L L +
Sbjct: 11 EQAAAKGWRELDLSGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIANLTNLIQLNLS 70
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
NQ+ +P I + L L +NN+++ + + LT L++ +++ NQI+ + +E
Sbjct: 71 YNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQISEI-PEEIAQ 129
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NL + L NNQIT + +++ LT L LYLS+NQ++E + ++I L LR + LS N+
Sbjct: 130 LTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISE-IPEEIAQLTNLRLLYLSDNQ 188
Query: 235 INKF 238
I +
Sbjct: 189 ITEI 192
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +T + ++ LT+L L+L+NN++ + ++ L+ L+LL + NQ+ +P I +
Sbjct: 141 NQITEIPEAIAQLTNLRELYLSNNQISEIPEEIAQLTNLRLLYLSDNQITEIPEAITQLT 200
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY ++N+IT + + LT L+ ++ NQIT + + L NL + L NNQIT
Sbjct: 201 NLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEI-PEALVKLTNLRQLDLSNNQIT 259
Query: 190 SM 191
+
Sbjct: 260 EI 261
>gi|410987956|ref|XP_004001475.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Felis
catus]
Length = 1223
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N
Sbjct: 82 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNE 134
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LPS++ L
Sbjct: 135 LEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENRLEELPSELGGLLLL 194
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 195 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 253
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L N+L E L +I G L + L N++
Sbjct: 254 PRSLGKLTKLTNLNADRNRL-EVLPPEIGGCVALSVLSLRDNRL 296
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L++L
Sbjct: 33 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQAL 92
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 93 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELW 152
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + S L GL L L LS N L + L D
Sbjct: 153 LDRNQLSTL-PPELGNLRRLVCLDVSENRLEELPSELGGLLLLTDLLLSQN-LLQRLPDG 210
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 211 IGQLKQLSILKVDQNRL 227
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L ++N+LE LP +
Sbjct: 220 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNADRNRLEVLPPE 279
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ +L L +L V ++ N++ R F H NL ++ L
Sbjct: 280 IGGCVALSVLSLRDNRLAALPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 336
Query: 184 QNNQITSM 191
NQ M
Sbjct: 337 AENQAQPM 344
>gi|326428300|gb|EGD73870.1| variable lymphocyte receptor A [Salpingoeca sp. ATCC 50818]
Length = 862
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFL 90
L G P + L L +N I+ I +F P ++ L + NNL L T L ++L
Sbjct: 256 LLGLP-ITELDLSDNKISVIANYSFVYPAKVQVLDLRSNNLKHLALEVFYNCTSLTHIYL 314
Query: 91 NNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
+N L +EG + L L++L + N L + + S L SLY ++N IT +D
Sbjct: 315 ADNLLDEIEGVEFQPLQHLEVLDVSSNYLTVVKEGLATAS-LQSLYLHDNIITQVDRAAF 373
Query: 150 GL-TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLS 207
L T L+ +D NQ+ + F NL ++ LQ+NQ+ S+ +L G L LYLS
Sbjct: 374 SLGTHLKNLTLDGNQLQHLPEGVFAACRNLQALYLQHNQLKSVTQNTLQGGDSLTALYLS 433
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
HN LTE + D+ GL++L T+D S+N+++ F
Sbjct: 434 HNHLTE--IKDL-GLRKLATLDASFNQLDYF 461
>gi|218960535|ref|YP_001740310.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans]
gi|167729192|emb|CAO80103.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 3445
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 15/206 (7%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L G L L L NN I++I+ A ++KL++ +N ++ L+ L GLT+L +L L N
Sbjct: 2397 LAGLTNLQELDLNNNQISNINPLAGLTNLQKLYLYYNQISDLS-PLSGLTNLQYLLLEYN 2455
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSLDGLLRG 150
++ ++ L L+ LQ+L + NQ+ SD+ ++L +L+ + N+I+ L L+ G
Sbjct: 2456 QISNIS-PLAGLTNLQVLDLYSNQI----SDLSPLAELTNLWYLDLSYNQISDLSPLV-G 2509
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
L LQ +D NQI + L NL + L NQI+ + S L+GLT L YLYL++NQ
Sbjct: 2510 LVNLQGLWLDNNQINDLS--PLIGLTNLQYLHLYYNQISDL-SPLTGLTNLHYLYLAYNQ 2566
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKIN 236
+++ L + GL L+ + L YN I+
Sbjct: 2567 ISD--LSSVEGLTNLQELYLDYNPIS 2590
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N + L+ L GLT+L L L +N++ L L L+ L L + NQ+ L
Sbjct: 3012 LQELYLYWNQIGDLS-PLAGLTNLQELDLYSNQISDLS-PLAELTNLWYLDLSYNQISDL 3069
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
S + + L LY N+I L L GLT LQV N+ NQI+ + L NL +
Sbjct: 3070 -SPLAGLTNLQDLYLGWNQINYLSPL-AGLTNLQVLNLYSNQISDLS--PLAELTNLQYL 3125
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L NQI+ + S L+GLT L YLYL++NQ+++ L + GL L+ + L YN+I+
Sbjct: 3126 HLYYNQISDL-SPLTGLTNLHYLYLAYNQISD--LSPLIGLTNLQYLHLYYNQISDISPL 3182
Query: 242 NE 243
E
Sbjct: 3183 AE 3184
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NI I + ++ L + N ++ L+ L GLT+L L+L N++ L L L+ L
Sbjct: 2933 NIISIEGAQYLTNLQSLDLDSNQISDLS-PLAGLTNLQELYLYYNQISDLS-PLAELTNL 2990
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT-MV 167
Q L + NQ+ L S + + L LY N+I L L GLT LQ ++ NQI+ +
Sbjct: 2991 QYLDLGGNQISDL-SPLAGLNNLQELYLYWNQIGDLSP-LAGLTNLQELDLYSNQISDLS 3048
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E NL LD L NQI+ + S L+GLT L LYL NQ+ L + GL L+
Sbjct: 3049 PLAELTNLWYLD---LSYNQISDL-SPLAGLTNLQDLYLGWNQIN--YLSPLAGLTNLQV 3102
Query: 228 VDLSYNKINKFGTRNE 243
++L N+I+ E
Sbjct: 3103 LNLYSNQISDLSPLAE 3118
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 9/203 (4%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L G L L L +N I+ + A + L + +N ++ L+ L GLT+L L+L N
Sbjct: 3028 LAGLTNLQELDLYSNQISDLSPLAELTNLWYLDLSYNQISDLS-PLAGLTNLQDLYLGWN 3086
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
++ L L L+ LQ+L + NQ+ L S + + L L+ N+I+ L L GLT
Sbjct: 3087 QINYLS-PLAGLTNLQVLNLYSNQISDL-SPLAELTNLQYLHLYYNQISDLSPL-TGLTN 3143
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L + +NQI+ + L NL + L NQI+ + S L+ LT L YL+L NQ+++
Sbjct: 3144 LHYLYLAYNQISDLS--PLIGLTNLQYLHLYYNQISDI-SPLAELTNLQYLWLDSNQISD 3200
Query: 214 FLLDDIRGLKRLRTVDLSYNKIN 236
L + GL L + L N I+
Sbjct: 3201 --LSPLAGLTNLWWLWLDGNPIS 3221
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N ++ ++ L GLT+L L L +N++ L L L+ LQ L + NQ+ L
Sbjct: 1167 LQNLILAYNQISDIS-PLAGLTNLQVLDLYSNQISYLS-PLAGLTNLQELYLHSNQISDL 1224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
S + + L + NN+I+ L L GLT LQ + +N+I + L NL S+
Sbjct: 1225 -SPLAGMTNLRVINLKNNQISDLSPL-AGLTNLQYLLLGWNKINDIS--PLAGLTNLWSL 1280
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NQI+ + S L+GLT L YLYL +N ++
Sbjct: 1281 NLSYNQISDL-SPLAGLTNLWYLYLDNNPIS 1310
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L GLT+L L L N++ + L L+ LQ+L + NQ+ L S + + L LY ++
Sbjct: 1161 LAGLTNLQNLILAYNQISDIS-PLAGLTNLQVLDLYSNQISYL-SPLAGLTNLQELYLHS 1218
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
N+I+ L L G+T L+V N+ NQI+ + L NL + L N+I + S L+GL
Sbjct: 1219 NQISDLSPL-AGMTNLRVINLKNNQISDLS--PLAGLTNLQYLLLGWNKINDI-SPLAGL 1274
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
T L L LS+NQ+++ L + GL L + L N I+
Sbjct: 1275 TNLWSLNLSYNQISD--LSPLAGLTNLWYLYLDNNPIS 1310
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 35/221 (15%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE 99
L +L L N I++++ A ++ L++G N ++ +N L GLT+++WLFL N + ++
Sbjct: 1706 LDSLYLSYNQISNLNPLAGLTNLKGLNLGSNQISDIN-PLAGLTNISWLFLFGNYISNI- 1763
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL---GSLYANNNR---ITSLDGL------ 147
L L L+ L + NQ+ SDI + L G + +N+ IT L GL
Sbjct: 1764 APLEGLYNLRNLQLHYNQI----SDITPLAALIDIGGIALGSNQIVDITPLAGLTHLIGL 1819
Query: 148 ------------LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
L GL LQ +D NQI + L L + L+NNQI + S+L
Sbjct: 1820 ELYHNQINNIDALSGLINLQWLYLDGNQI--IDISPLAGLSILRELYLENNQINDI-STL 1876
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
S L L YL+L +NQ+++ L + GL L + L N I+
Sbjct: 1877 SELNNLQYLFLYNNQISD--LSPLAGLTNLWWLLLDGNPIS 1915
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 12/157 (7%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
LT+L ++L +N++ L L L+ LQ L++ NQ+ SDI + L +L +
Sbjct: 1098 LTNLQVMYLYSNQISDLS-PLAGLANLQELLLYANQI----SDISPLAGLNNLQYLLLQY 1152
Query: 142 TSLDGL--LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
+ L L GLT LQ + +NQI+ + L NL + L +NQI+ + S L+GLT
Sbjct: 1153 NQISDLSPLAGLTNLQNLILAYNQISDIS--PLAGLTNLQVLDLYSNQISYL-SPLAGLT 1209
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L LYL NQ+++ L + G+ LR ++L N+I+
Sbjct: 1210 NLQELYLHSNQISD--LSPLAGMTNLRVINLKNNQIS 1244
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L G L L+L N I+ I A ++ L + ++N S + L GLT+L L+L++N
Sbjct: 1161 LAGLTNLQNLILAYNQISDISPLAGLTNLQVLDL-YSNQISYLSPLAGLTNLQELYLHSN 1219
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
++ L L ++ L+++ ++ NQ+ L S + + L L N+I + L GLT
Sbjct: 1220 QISDLS-PLAGMTNLRVINLKNNQISDL-SPLAGLTNLQYLLLGWNKINDISPL-AGLTN 1276
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L N+ +NQI+ + L NL + L NN I+ + LS L + S+N L+
Sbjct: 1277 LWSLNLSYNQISDLS--PLAGLTNLWYLYLDNNPISYESMLLSQSWALPWSTSSYNPLSP 1334
Query: 214 FLLDDIRG 221
D RG
Sbjct: 1335 CYPDPNRG 1342
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 11/120 (9%)
Query: 122 PSDIQ-----LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
PSD Q L G+L+A+ I S++G + LT LQ ++D NQI+ + L
Sbjct: 2279 PSDYQPTIADLQGLAGNLHADGRNIISIEGA-QYLTNLQSLDLDSNQISDLS--PLAGLT 2335
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NL + L +N I + S L+GLT L YL L NQ+++ L + GL L+ + L +N+IN
Sbjct: 2336 NLLELYLLDNMINYL-SPLAGLTNLQYLDLGGNQISD--LSPLAGLTNLQDLYLGWNQIN 2392
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
S+EG L+ LQ L ++ NQ+ L S + + L LY +N I L L GLT LQ
Sbjct: 2305 SIEGA-QYLTNLQSLDLDSNQISDL-SPLAGLTNLLELYLLDNMINYLSPL-AGLTNLQY 2361
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
++ NQI+ + L NL + L NQI + S L+GLT L L L++NQ++ +
Sbjct: 2362 LDLGGNQISDLS--PLAGLTNLQDLYLGWNQINYL-SPLAGLTNLQELDLNNNQISN--I 2416
Query: 217 DDIRGLKRLRTVDLSYNKIN 236
+ + GL L+ + L YN+I+
Sbjct: 2417 NPLAGLTNLQKLYLYYNQIS 2436
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 26/126 (20%)
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
G+L A + I S++G + LT LQV + NQI+ + L NL + L NQI+ +
Sbjct: 1080 GTLNAWDRNIISIEG-AQYLTNLQVMYLYSNQISDLS--PLAGLANLQELLLYANQISDI 1136
Query: 192 N---------------------SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ S L+GLT L L L++NQ+++ + + GL L+ +DL
Sbjct: 1137 SPLAGLNNLQYLLLQYNQISDLSPLAGLTNLQNLILAYNQISD--ISPLAGLTNLQVLDL 1194
Query: 231 SYNKIN 236
N+I+
Sbjct: 1195 YSNQIS 1200
>gi|149040409|gb|EDL94447.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
[Rattus norvegicus]
Length = 524
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L ++S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKD-VRNLPRLSTLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP++++L ++ N L SL + L +L L L+ N L SL L L KL++L
Sbjct: 115 LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRML 174
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N+L +PS + L +LY NRIT+++ +R L +L ++ N+I + E
Sbjct: 175 DLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPA-E 233
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL ++ + +NQ+ + + T++ L L HN+L + L D I L L + L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLNRLGLR 292
Query: 232 YNKINKF 238
YN+++
Sbjct: 293 YNRLSAI 299
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ +R L L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+LP+
Sbjct: 406 ELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPN 465
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+I L L NN++T+L + LT L + N +T
Sbjct: 466 EIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLT 507
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ LN L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 37/237 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLN 86
D++ P L TL + N I + P I +L V N L L + T +
Sbjct: 210 DVRNLPRLSTLSIRENKIKQL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G LS L L + N+L A+P + S L L NN I++L +
Sbjct: 265 NLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPE 324
Query: 146 GLLRGLTKL----------QVF--------------NMDFNQITMVRRDEFQNLHNLDSI 181
LL L KL Q++ NM+ N+I + F L +
Sbjct: 325 SLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKL 384
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL L + LS N + K
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL 440
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L+ L + +N+L SL GT + + L + NQL +P D+ L L +NN + L
Sbjct: 381 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
L L KL+ +++ N++ + +E L +L + L NNQ+T++ + LT L +L
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLP-NEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHL 499
Query: 205 YLSHNQLTEF 214
L N LT
Sbjct: 500 GLGENLLTHL 509
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
NN+L +L +G L+ L L + +N L LP +I
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513
>gi|50979010|ref|NP_001003229.1| biglycan precursor [Canis lupus familiaris]
gi|3024394|sp|O02678.1|PGS1_CANFA RecName: Full=Biglycan; AltName: Full=Bone/cartilage proteoglycan
I; AltName: Full=PG-S1; Flags: Precursor
gi|1916846|gb|AAB51244.1| biglycan [Canis lupus familiaris]
Length = 369
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L +DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRADDFKGLHHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPSGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAY-----YNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSLN-NSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRADDFKGLHHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
Length = 313
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N TSL + L +L L L+ N+ SL ++G L L++L + NQL +L
Sbjct: 42 LRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSL 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N+ TSL + L L+V N+ NQ+T + + E L NL+ +
Sbjct: 102 PKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPK-EIGQLQNLERL 160
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ TS+ + L KL L L HN+ T F +IR + L+ + LS +++
Sbjct: 161 DLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIF-PKEIRQQQSLKWLRLSGDQL 213
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ N LTSL + L +L L L N+ SL ++G L L+ L ++ NQ +L
Sbjct: 19 LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N++TSL + L L+ ++D NQ T + + E L NL +
Sbjct: 79 PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPK-EIGQLQNLRVL 137
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+L NQ+TS+ + L L L L+ NQ T L +I L++L ++L +N+ F
Sbjct: 138 NLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS-LPKEIGQLQKLEALNLDHNRFTIF 193
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L+ N+L SL ++G L L++L + NQ +LP +I
Sbjct: 1 MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L + N+ TSL + L L+V N+ NQ+T + + E L NL+ + L N
Sbjct: 61 QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPK-EIGQLQNLERLDLDGN 119
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
Q TS+ + L L L L+ NQLT L +I L+ L +DL+ N+
Sbjct: 120 QFTSLPKEIGQLQNLRVLNLAGNQLTS-LPKEIGQLQNLERLDLAGNQ 166
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LTSL + L +L L L+ N+ SL ++G L L++L + NQL +L
Sbjct: 88 LRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSL 147
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+ TSL + L KL+ N+D N+ T+ + E + +L +
Sbjct: 148 PKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPK-EIRQQQSLKWL 206
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +Q+ ++ + L L L+L NQLT L +I L+ L ++L NK+
Sbjct: 207 RLSGDQLKTLPKEILLLQNLQSLHLDSNQLTS-LPKEIGQLQNLFELNLQDNKL 259
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N T +R L WL L+ ++LK+L ++ L LQ L ++ NQL +L
Sbjct: 180 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSL 239
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L +N++ +L + L KL+V + N ++ + + Q L
Sbjct: 240 PKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLKEKQKIQEL 293
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 47/171 (27%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN----- 116
+R L++ N LTSL + L +L L L N+ SL ++G L KL+ L ++ N
Sbjct: 134 LRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIF 193
Query: 117 ------------------QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
QL+ LP +I L L SL+ ++N++TSL
Sbjct: 194 PKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLP------------- 240
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
E L NL ++LQ+N++ ++ + L KL L L N
Sbjct: 241 -----------KEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSN 280
>gi|390475905|ref|XP_002807686.2| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
[Callithrix jacchus]
Length = 1471
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + NQL E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNQL-EALPSEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++NQLEALPS+
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNQLEALPSE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L ++L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|260825634|ref|XP_002607771.1| hypothetical protein BRAFLDRAFT_82780 [Branchiostoma floridae]
gi|229293120|gb|EEN63781.1| hypothetical protein BRAFLDRAFT_82780 [Branchiostoma floridae]
Length = 702
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 105/201 (52%), Gaps = 12/201 (5%)
Query: 41 ITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE 99
+ L L N +T I + F T + L+V N LT++ +++ L L+WL N L+ L
Sbjct: 16 LKLDLSNQGLTSIPDEVFNITDLEILNVSNNKLTNIPDAINRLQKLHWLDAERNMLRKLP 75
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
+ +LS L++L++ N+L +LP ++ +L LY ++N + + ++ ++ L+V +
Sbjct: 76 RGICSLSNLEVLIVSNNELSSLPPELAKMKKLTKLYIHDNYLKEIPPVVCSMSNLEVLTV 135
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
DE + L NL +SL NN + ++ S++ L L +YL +NQ E L + +
Sbjct: 136 ----------DELEQLQNLWYLSLSNNNLRTLPSTMRHLHNLREVYLRNNQF-ETLPEVL 184
Query: 220 RGLKRLRTVDLSYNKINKFGT 240
L + +D+ N+I + +
Sbjct: 185 CELPEMEKLDIRNNQIARLPS 205
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
NNL +L +++R L +L ++L NN+ ++L L L +++ L I NQ+ LPS +
Sbjct: 152 NNLRTLPSTMRHLHNLREVYLRNNQFETLPEVLCELPEMEKLDIRNNQIARLPSSLHRAD 211
Query: 130 QLGSLYANNN 139
L L N
Sbjct: 212 NLEDLKVAGN 221
>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 406
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL+V NNL L + L +L L L+ NRL +L ++G L KL+ L + N+L L
Sbjct: 96 LQKLNVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTIL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N +TSL + L K + + NQ+T + + L NL+ I
Sbjct: 156 PKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQG-LCKLQNLEQI 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L N++TS+ + L KL LYL N+LT L ++I L+ LR + L N
Sbjct: 215 YLHQNRLTSLPKEIGQLRKLWTLYLYSNELTT-LPEEIGQLQNLRQLSLKLN 265
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ LHV +N LT L + L +L L L N L SL ++G L K + L + NQL L
Sbjct: 142 LETLHVYYNRLTILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTL 201
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + L +Y + NR+TSL + L KL + N++T + +E L NL +
Sbjct: 202 PQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTL-PEEIGQLQNLRQL 260
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N +T++ + L L L LS NQLT + +I L+ L+ +DLS N +
Sbjct: 261 SLKLNNLTTLPKEIGQLQNLDNLDLSDNQLT-LIPKEIGQLQNLKLLDLSGNSL 313
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT+ + +L L L+NN+LK+L ++G L LQ L + N L LP +I L
Sbjct: 60 LTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQEIGQLQNL 119
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + NR+T+L + L KL+ ++ +N++T++ + E L NL+ + L N +TS+
Sbjct: 120 EQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPK-EIGQLQNLEELILYGNSLTSL 178
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
+ L K LYL NQLT +GL +L+ ++ Y
Sbjct: 179 PEEIGQLQKFEKLYLHDNQLTTL----PQGLCKLQNLEQIY 215
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ ++++ N LTSL + L L L+L +N L +L ++G L L+ L ++ N L L
Sbjct: 211 LEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L ++N++T + + L L++ ++ N +T + + E L NL +
Sbjct: 271 PKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPK-EIGQLQNLKLL 329
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLS 207
L N +T++ + L L +L +
Sbjct: 330 DLSGNSLTTLPKEIGQLKNLYFLAMK 355
>gi|348510548|ref|XP_003442807.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 1-like [Oreochromis niloticus]
Length = 983
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 25/201 (12%)
Query: 42 TLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE-G 100
TL L NN+IT + FP LH+ L+L+NN++ LE G
Sbjct: 75 TLDLSNNDITELRGQCFP---AGLHI------------------RDLYLSNNKISVLELG 113
Query: 101 QLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFN 158
L L + LQ+L + +N++ +P +L L N NRI ++GL +GL+ L+V
Sbjct: 114 ALDHLGETLQVLRLSRNRISQIPVKAFQLPRLTQLELNRNRIRQVEGLTFQGLSSLEVLK 173
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLD 217
+ N I+ + F +L + + L N +T +NS SL GLT L L+LS+N + D
Sbjct: 174 LQRNSISKLTDGAFFDLAKMKVLHLDYNSLTEVNSGSLYGLTSLQQLFLSNNSIARINPD 233
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+ ++LR ++LSYN + +
Sbjct: 234 GWKFCQKLRELNLSYNNLTRL 254
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSLN-NSLRGLTDLNW 87
S L G +L L L NN+I I+ + F +R+L++ +NNLT L+ SL L DL+
Sbjct: 208 SGSLYGLTSLQQLFLSNNSIARINPDGWKFCQKLRELNLSYNNLTRLDEGSLAVLGDLHT 267
Query: 88 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQ-LFSQLGSLYA---NNNRIT 142
L L +N + + EG L L++L ++ N + D FS L SL N+I
Sbjct: 268 LRLGHNSISHINEGAFRGLKALRILELDHNDISGTIEDTNGAFSGLDSLIKLTLFENKIK 327
Query: 143 SL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
S+ GL L+ N+ N I ++ D F + NL S+ +Q+N +
Sbjct: 328 SVAKKAFSGLETLEHLNLGENAIRSIQPDAFTKMRNLKSLLIQSNSL 374
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFL 90
+G +L L L N+I+ + + AF ++ LH+ +N+LT +N+ SL GLT L LFL
Sbjct: 163 FQGLSSLEVLKLQRNSISKLTDGAFFDLAKMKVLHLDYNSLTEVNSGSLYGLTSLQQLFL 222
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLR 149
+NN + + P + +L L + N +T LD G L
Sbjct: 223 SNNSIARIN----------------------PDGWKFCQKLRELNLSYNNLTRLDEGSLA 260
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM----NSSLSGLTKLAYLY 205
L L + N I+ + F+ L L + L +N I+ N + SGL L L
Sbjct: 261 VLGDLHTLRLGHNSISHINEGAFRGLKALRILELDHNDISGTIEDTNGAFSGLDSLIKLT 320
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N++ GL+ L ++L N I
Sbjct: 321 LFENKIKSVAKKAFSGLETLEHLNLGENAI 350
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 84/153 (54%), Gaps = 5/153 (3%)
Query: 90 LNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
L +N+L S+ + L L+ L ++ N+L ++P Q S++ SLY ++N+I S+DG
Sbjct: 7 LGHNKLTSISPEAFANLPNLRELRLDHNELTSIPDLGQAASKIVSLYLHHNKIRSIDGRR 66
Query: 149 RG-LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTK-LAYLY 205
G L ++ ++ N IT +R F ++ + L NN+I+ + +L L + L L
Sbjct: 67 TGELLSVETLDLSNNDITELRGQCFPAGLHIRDLYLSNNKISVLELGALDHLGETLQVLR 126
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LS N++++ + + L RL ++L+ N+I +
Sbjct: 127 LSRNRISQIPVKAFQ-LPRLTQLELNRNRIRQV 158
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
+ N+ N++T + + F NL NL + L +N++TS+ +K+ LYL HN++
Sbjct: 4 IRNLGHNKLTSISPEAFANLPNLRELRLDHNELTSIPDLGQAASKIVSLYLHHNKIRSID 63
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
L + T+DLS N I +
Sbjct: 64 GRRTGELLSVETLDLSNNDITEL 86
>gi|456874712|gb|EMF89984.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
Length = 269
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L+ N+L +L ++G L KLQ L + +NQL
Sbjct: 49 PKDVRILGLSGRELATLPKEIGQLQNLQLLDLSKNQLATLPKEIGQLKKLQTLHLSENQL 108
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I+ +L +L N+N++T+L + L LQ N++ NQ+T + + E L NL
Sbjct: 109 TTLPKEIEQLKKLQTLDLNHNKLTTLPKEIGQLQNLQELNLNGNQLTTLPK-EIGQLKNL 167
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +NQ+ ++ + L KL L L NQLT L +I L+ L+ +DLS N++
Sbjct: 168 YRLELNSNQLATLPKEIGQLQKLQSLGLYSNQLT-TLPKEIGKLQNLQELDLSENQL 223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N LT+L + L L L LN+N+L +L ++G L LQ L + NQL L
Sbjct: 98 LQTLHLSENQLTTLPKEIEQLKKLQTLDLNHNKLTTLPKEIGQLQNLQELNLNGNQLTTL 157
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+N++ +L + L KLQ + NQ+T + + E L NL +
Sbjct: 158 PKEIGQLKNLYRLELNSNQLATLPKEIGQLQKLQSLGLYSNQLTTLPK-EIGKLQNLQEL 216
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L NQ+T++ + L L +L L +N
Sbjct: 217 DLSENQLTTLPKEIEQLKNLRWLSLKNN 244
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ L +L ++G L LQLL + +NQL LP +I +L +L
Sbjct: 42 LAKALQNPKDVRILGLSGRELATLPKEIGQLQNLQLLDLSKNQLATLPKEIGQLKKLQTL 101
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ + N++T+L + L KLQ +++ N++T + + E L NL ++L NQ+T++
Sbjct: 102 HLSENQLTTLPKEIEQLKKLQTLDLNHNKLTTLPK-EIGQLQNLQELNLNGNQLTTLPKE 160
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L+ NQL L +I L++L+++ L N++
Sbjct: 161 IGQLKNLYRLELNSNQLA-TLPKEIGQLQKLQSLGLYSNQL 200
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 52 HIHEN---AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
H+ EN P I +L + N LT+L + L +L L LN N+L +L ++
Sbjct: 102 HLSENQLTTLPKEIEQLKKLQTLDLNHNKLTTLPKEIGQLQNLQELNLNGNQLTTLPKEI 161
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L L L + NQL LP +I +L SL +N++T+L + L LQ ++ N
Sbjct: 162 GQLKNLYRLELNSNQLATLPKEIGQLQKLQSLGLYSNQLTTLPKEIGKLQNLQELDLSEN 221
Query: 163 QITMVRRDEFQNLHNLDSISLQNN 186
Q+T + + E + L NL +SL+NN
Sbjct: 222 QLTTLPK-EIEQLKNLRWLSLKNN 244
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L +L L LN+N+L +L ++G L KLQ L + NQL L
Sbjct: 144 LQELNLNGNQLTTLPKEIGQLKNLYRLELNSNQLATLPKEIGQLQKLQSLGLYSNQLTTL 203
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L + N++T+L + L L+ ++ N + +++E + L
Sbjct: 204 PKEIGKLQNLQELDLSENQLTTLPKEIEQLKNLRWLSLKNNTALIPQKNEIRKL 257
>gi|359683882|ref|ZP_09253883.1| hypothetical protein Lsan2_04024, partial [Leptospira santarosai
str. 2000030832]
Length = 225
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 1/153 (0%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + N LT + L +L +L L NN+LK+L ++GTL KL+ L + +NQL
Sbjct: 37 PMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIGTLQKLKWLYLSENQL 96
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ LP +I+ +L LY + N++ +L + L L+V ++ NQ+ + E L +L
Sbjct: 97 KTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTL-PSEIGKLRSL 155
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L++NQ+ ++ + L L L L++NQL
Sbjct: 156 KRLHLEHNQLITLPQEIGTLQDLEELNLANNQL 188
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L L WL+L+ N+LK+L ++GTL L++L + +NQL L
Sbjct: 86 LKWLYLSENQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTL 145
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS+I L L+ +N++ +L + L L+ N+ NQ+ ++ + E L +L +
Sbjct: 146 PSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPK-EIGTLQHLQDL 204
Query: 182 SLQNNQITSMNSSLSGLTKLA 202
S+ NNQ+ ++ + L L
Sbjct: 205 SVFNNQLITLPQEIGKLQNLK 225
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
N +L+ D+ L L NN+L ++GTL L+ L + NQL+ LP +I +L LY
Sbjct: 31 NEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIGTLQKLKWLY 90
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+ N++ +L + L KL+ + NQ+ + + E L NL+ + L NQ+ ++ S +
Sbjct: 91 LSENQLKTLPKEIETLQKLKWLYLSENQLKTLPK-EIGTLQNLEVLDLYKNQLRTLPSEI 149
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L L+L HNQL L +I L+ L ++L+ N++
Sbjct: 150 GKLRSLKRLHLEHNQLIT-LPQEIGTLQDLEELNLANNQL 188
>gi|410917029|ref|XP_003971989.1| PREDICTED: leucine-rich repeat protein SHOC-2-like isoform 1
[Takifugu rubripes]
Length = 582
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L S++ LT L L+L +N+L+SL +LG LS L L + +N L +LP + +L L
Sbjct: 115 LPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSLPDSLDSLKKLQML 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ LT L + FN+IT V +D ++L L +S++ N+I + +
Sbjct: 175 DLRHNKLREIPAVVYRLTTLTTLYLRFNRITTVEKD-IRHLSKLTMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 234 IGELCSLVTLDVAHNQL-EHLPKEIGNCTKITNLDLQHNEL 273
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N L SL L L+ L L L+ N L SL L +L KLQ+L + N+L +
Sbjct: 125 LAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSLPDSLDSLKKLQMLDLRHNKLREI 184
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ + + L +LY NRIT+++ +R L+KL + ++ N+I + E L +L ++
Sbjct: 185 PAVVYRLTTLTTLYLRFNRITTVEKDIRHLSKLTMLSIRENKIKQLPA-EIGELCSLVTL 243
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ +NQ+ + + TK+ L L HN+L + L + I L + + L YN+++
Sbjct: 244 DVAHNQLEHLPKEIGNCTKITNLDLQHNELLD-LPETIGNLASINRLGLRYNRLSAI 299
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L +G L KL+ L +E+N+LE
Sbjct: 403 SMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLEC 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N + + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQNL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 4/180 (2%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
FN +T++ +R L+ L L + N++K L ++G L L L + NQLE LP +I
Sbjct: 201 FNRITTVEKDIRHLSKLTMLSIRENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNC 260
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
+++ +L +N + L + L + + +N+++ + R L+ ++L+NN I
Sbjct: 261 TKITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRS-LAKCRELEELNLENNNI 319
Query: 189 TSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTRNEGK 245
+ + LS L KL L L+ N + + + ++++ +N INK FG + K
Sbjct: 320 SVLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNCINKIPFGIFSRAK 379
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 29/224 (12%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L+TL + +N + H+ + T I L + N L L ++ L +N L L NRL +
Sbjct: 239 SLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSA 298
Query: 98 L------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLG 132
+ EG L +L KL L + +N ++ P FS +
Sbjct: 299 IPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIY 358
Query: 133 SLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
SL +N I + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 359 SLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKI 417
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ GL L L LS+N L + L I L++LR +DL NK+
Sbjct: 418 PEDVCGLVSLEVLILSNNLLKK-LPHGIGNLRKLRELDLEENKL 460
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L L N + L DL L L
Sbjct: 419 EDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L+ LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|332030313|gb|EGI70056.1| Insulin-like growth factor-binding protein complex acid labile
chain [Acromyrmex echinatior]
Length = 342
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 116/213 (54%), Gaps = 7/213 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSL-NNSLRGLTDL 85
L +G P L L L ++N+ + E+ F ++ L + FN + S+ +S GL+ L
Sbjct: 89 LKRGSFRGLPNLERLHL-DDNVVPLSEHLFAELGHLQSLSLIFNRINSIPKDSFAGLSSL 147
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL 144
WL+L +N ++++E + +L L + N++ + P ++L L+ + NR+ L
Sbjct: 148 MWLYLGHNDIEAIEAESFPNLELLYLWLNNNKITRIAPGSFAGLTELNRLHLDYNRLVDL 207
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLA 202
+G+ RGL KL+V ++ N+IT + R ++L L S+ LQ+N+I+++ + L++L
Sbjct: 208 PNGVFRGLNKLEVLYLNDNRITSISRTLLRDLVGLKSLFLQHNEISALEPETFRELSQLE 267
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L+ N+L+ ++ GL L + LS N I
Sbjct: 268 LLRLNGNKLSHIVVGTFTGLSNLEEIRLSDNNI 300
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%), Gaps = 12/220 (5%)
Query: 1 MSRFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP 60
+S + E GH +L+LI + + D G +L+ L L +N+I I +FP
Sbjct: 112 LSEHLFAELGHLQSLSLI----FNRINSIPKDSFAGLSSLMWLYLGHNDIEAIEAESFP- 166
Query: 61 TIRKLHVGFNN--LTSLN-NSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQN 116
+ L++ NN +T + S GLT+LN L L+ NRL L G L+KL++L + N
Sbjct: 167 NLELLYLWLNNNKITRIAPGSFAGLTELNRLHLDYNRLVDLPNGVFRGLNKLEVLYLNDN 226
Query: 117 QLEALPSDI-QLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQN 174
++ ++ + + L SL+ +N I++L+ R L++L++ ++ N+++ + F
Sbjct: 227 RITSISRTLLRDLVGLKSLFLQHNEISALEPETFRELSQLELLRLNGNKLSHIVVGTFTG 286
Query: 175 LHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTE 213
L NL+ I L +N I ++ N + KL YLY N TE
Sbjct: 287 LSNLEEIRLSDNNIQTVDNGAFVDFVKLRYLYFGGNNFTE 326
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Query: 49 NITHIHENAFP-PTIRKLHVGFNNLTSL--NNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
N+ I E+AF T L++ N S+ S RGL +L L L++N + E L
Sbjct: 61 NLLAIREDAFKNVTATHLYLNQGNRISVLKRGSFRGLPNLERLHLDDNVVPLSEHLFAEL 120
Query: 106 SKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
LQ L + N++ ++P D S L LY +N I +++ +L ++ N+I
Sbjct: 121 GHLQSLSLIFNRINSIPKDSFAGLSSLMWLYLGHNDIEAIEAESFPNLELLYLWLNNNKI 180
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEF---LLDDIR 220
T + F L L+ + L N++ + N GL KL LYL+ N++T LL D+
Sbjct: 181 TRIAPGSFAGLTELNRLHLDYNRLVDLPNGVFRGLNKLEVLYLNDNRITSISRTLLRDLV 240
Query: 221 GLKRL 225
GLK L
Sbjct: 241 GLKSL 245
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
V+++ LP+ L L+ ++N + + L L LQ ++ FN+I + +D
Sbjct: 88 VLKRGSFRGLPN-------LERLHLDDNVVPLSEHLFAELGHLQSLSLIFNRINSIPKDS 140
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
F L +L + L +N I ++ + +L YL+L++N++T GL L + L
Sbjct: 141 FAGLSSLMWLYLGHNDIEAIEAESFPNLELLYLWLNNNKITRIAPGSFAGLTELNRLHLD 200
Query: 232 YNKI 235
YN++
Sbjct: 201 YNRL 204
>gi|297305035|ref|XP_001086112.2| PREDICTED: biglycan [Macaca mulatta]
Length = 334
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 71 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 130
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 131 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 190
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D L L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 191 KD--LPETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 247
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 248 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 302
Query: 237 KF 238
F
Sbjct: 303 LF 304
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P + L
Sbjct: 66 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPN--L 123
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 124 PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 182
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 183 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 231
>gi|327263159|ref|XP_003216388.1| PREDICTED: protein LAP2-like isoform 2 [Anolis carolinensis]
Length = 1295
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLAIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T++ +
Sbjct: 194 NEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L + L +N + + S+ L KLA L + NQL +L D I GL + +D S+N+I
Sbjct: 254 SLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLM-YLPDSIGGLTSVEELDCSFNEI 311
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ +L + G L L L++N L+ L +G L KL +L I++NQL LP
Sbjct: 235 LDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I GLT ++ + FN+I + Q L N+ + +
Sbjct: 295 IG-----------------------GLTSVEELDCSFNEIEALPSSVGQ-LSNIRTFAAD 330
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N +T + + + L+L N+L EFL +++ +++L+ ++LS N++
Sbjct: 331 HNFLTQLPPEIGNWKYVTVLFLHSNKL-EFLPEEMGDMQKLKVINLSDNRL 380
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG-LKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT L+ G LK L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLT--LIPGFMGSLKHLIYLDVSKNNI 242
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLAIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTEV 199
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
IR N LT L + + LFL++N+L+ L ++G + KL+++ + N+L+ L
Sbjct: 324 IRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYL 383
Query: 122 PSDIQLFSQLGSLYANNNRITSL 144
P QL +++ ++N+ L
Sbjct: 384 PYSFTKLQQLTAMWLSDNQSKPL 406
>gi|260807917|ref|XP_002598754.1| hypothetical protein BRAFLDRAFT_74570 [Branchiostoma floridae]
gi|229284029|gb|EEN54766.1| hypothetical protein BRAFLDRAFT_74570 [Branchiostoma floridae]
Length = 840
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNR 94
P+L L L NNNIT I F P ++ L + N +T ++ S L L LFL N+
Sbjct: 122 PSLEMLCLSNNNITTIQSGLFANLPQLQDLFLHENQITVIHPGSFVDLIHLERLFLQVNK 181
Query: 95 LKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNNRITSLD-GLLR 149
+ +++ L LS++Q+L + +NQ+ + D LF+ L L +N+IT + G
Sbjct: 182 ITTIQSIGLAHLSQIQILDLCRNQITVIQPD--LFANLIHLKKLLLFSNKITMIQAGTFA 239
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
L +LQ + NQIT ++ F NL L+ + L N+IT ++ + + LT L LY+ H
Sbjct: 240 NLPQLQELKLLHNQITDIQAGSFANLPRLEVLLLSQNEITEIHPGTFANLTHLKGLYMEH 299
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N +T L RLR + L+ NKI
Sbjct: 300 NTITVIQAGAFTNLPRLRLLFLARNKI 326
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 7/206 (3%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLK 96
L TL L +N IT I F P ++++++ N +T + + L L L L+NN +
Sbjct: 76 LKTLKLRSNQITIIQAGTFANLPRLQEVNLASNQITDVQAGAFANLPSLEMLCLSNNNIT 135
Query: 97 SLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDGL-LRGLTK 153
+++ G L +LQ L + +NQ+ + P L L+ N+IT++ + L L++
Sbjct: 136 TIQSGLFANLPQLQDLFLHENQITVIHPGSFVDLIHLERLFLQVNKITTIQSIGLAHLSQ 195
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLT 212
+Q+ ++ NQIT+++ D F NL +L + L +N+IT + + + + L +L L L HNQ+T
Sbjct: 196 IQILDLCRNQITVIQPDLFANLIHLKKLLLFSNKITMIQAGTFANLPQLQELKLLHNQIT 255
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L RL + LS N+I +
Sbjct: 256 DIQAGSFANLPRLEVLLLSQNEITEI 281
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 15/196 (7%)
Query: 50 ITHIHENAFPPTIRKLHVGFNNLTSLNNS--LRGLTDLNWLFLNNNRLKSLE-GQLGTLS 106
+T I +N P I L +G N +T + S ++ L L L +N++ ++ G L
Sbjct: 40 LTSIPQN-LPTNISSLDMGHNLITGVYESELVQYRDTLKTLKLRSNQITIIQAGTFANLP 98
Query: 107 KLQLLVIEQNQLEALPSDIQL--FSQLGSL----YANNNRITSLDGLLRGLTKLQVFNMD 160
+LQ + + NQ+ +D+Q F+ L SL +NNN T GL L +LQ +
Sbjct: 99 RLQEVNLASNQI----TDVQAGAFANLPSLEMLCLSNNNITTIQSGLFANLPQLQDLFLH 154
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDI 219
NQIT++ F +L +L+ + LQ N+IT++ S L+ L+++ L L NQ+T D
Sbjct: 155 ENQITVIHPGSFVDLIHLERLFLQVNKITTIQSIGLAHLSQIQILDLCRNQITVIQPDLF 214
Query: 220 RGLKRLRTVDLSYNKI 235
L L+ + L NKI
Sbjct: 215 ANLIHLKKLLLFSNKI 230
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLK 96
L LLL +N IT I F P +++L + N +T + S L L L L+ N +
Sbjct: 220 LKKLLLFSNKITMIQAGTFANLPQLQELKLLHNQITDIQAGSFANLPRLEVLLLSQNEIT 279
Query: 97 SLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSLD-GLLRGL 151
+ G L+ L+ L +E N + + + F+ L L + N+IT++ G L
Sbjct: 280 EIHPGTFANLTHLKGLYMEHNTITVIQAGA--FTNLPRLRLLFLARNKITTIQAGAFENL 337
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
T L+ + NQI + F NL +L + L NN+ +S LAY
Sbjct: 338 TNLKFLVLHSNQIATIHSGAFSNLRHLQHLGLSNNK-------MSAFAPLAY 382
>gi|194373435|dbj|BAG56813.1| unnamed protein product [Homo sapiens]
Length = 334
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 71 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 130
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 131 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 190
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D L L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 191 KD--LPETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 247
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 248 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 302
Query: 237 KF 238
F
Sbjct: 303 LF 304
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P + L
Sbjct: 66 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPN--L 123
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 124 PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 182
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 183 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 231
>gi|124008083|ref|ZP_01692782.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123986497|gb|EAY26303.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 488
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 93/152 (61%), Gaps = 2/152 (1%)
Query: 62 IRKLHVGFN-NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++L + FN ++TSL+ + L +L ++ L++ +L SL ++G+L L+ LV+E N+L +
Sbjct: 99 LQRLDLAFNRDMTSLDPRIGKLKNLQYISLHSCKLTSLPKEIGSLPNLETLVVESNKLGS 158
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I ++ L + N ++++ + L L+ + N IT + D+ L NL +
Sbjct: 159 IPAEIGQLPKIKELKLSYNELSAVPEEIYNLASLENLYLHRNDITNL-SDKVGQLTNLKN 217
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
++L +NQI+S+ +S+ L L YL LS N+LT
Sbjct: 218 LTLASNQISSVPASIKNLKNLRYLTLSDNKLT 249
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LTSL + L +L L + +N+L S+ ++G L K++ L + N+L A+P +I + L
Sbjct: 133 LTSLPKEIGSLPNLETLVVESNKLGSIPAEIGQLPKIKELKLSYNELSAVPEEIYNLASL 192
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
+LY + N IT+L + LT L+ + NQI+ V +NL NL ++L +N++T++
Sbjct: 193 ENLYLHRNDITNLSDKVGQLTNLKNLTLASNQISSVPAS-IKNLKNLRYLTLSDNKLTAL 251
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
L L KL+ LYL N + L + L++L + L
Sbjct: 252 PEELGELNKLSMLYLGKNTGLQKLPESTPKLEKLYDLQL 290
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 32/233 (13%)
Query: 38 PALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
P L TL++ +N + I E P I++L + +N L+++ + L L L+L+ N +
Sbjct: 144 PNLETLVVESNKLGSIPAEIGQLPKIKELKLSYNELSAVPEEIYNLASLENLYLHRNDIT 203
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL-- 154
+L ++G L+ L+ L + NQ+ ++P+ I+ L L ++N++T+L L L KL
Sbjct: 204 NLSDKVGQLTNLKNLTLASNQISSVPASIKNLKNLRYLTLSDNKLTALPEELGELNKLSM 263
Query: 155 --------------------QVFNMDFNQIT-MVRRDEF---QNLHNLDSISLQN-NQIT 189
+++++ N T + D F NL L I +Q +
Sbjct: 264 LYLGKNTGLQKLPESTPKLEKLYDLQLNGCTNLDLEDTFNKLANLPKLQKIWMQKLGKPL 323
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLL----DDIRGLKRLRTVDLSYNKINKF 238
+ ++ L + L+L +N+ + L D I + LRT+++S +KI K
Sbjct: 324 KLPKNVKNLASVKALFLDNNEYEQGELSRTFDLISAMPALRTLNISNSKITKI 376
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 122/278 (43%), Gaps = 65/278 (23%)
Query: 22 PETGSHPLTSDDLKGTP-------ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLT 73
P+ L+ ++L P +L L L N+IT++ + T ++ L + N ++
Sbjct: 167 PKIKELKLSYNELSAVPEEIYNLASLENLYLHRNDITNLSDKVGQLTNLKNLTLASNQIS 226
Query: 74 SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN-----------QLEAL- 121
S+ S++ L +L +L L++N+L +L +LG L+KL +L + +N +LE L
Sbjct: 227 SVPASIKNLKNLRYLTLSDNKLTALPEELGELNKLSMLYLGKNTGLQKLPESTPKLEKLY 286
Query: 122 ---------------------------------------PSDIQLFSQLGSLYANNNR-- 140
P +++ + + +L+ +NN
Sbjct: 287 DLQLNGCTNLDLEDTFNKLANLPKLQKIWMQKLGKPLKLPKNVKNLASVKALFLDNNEYE 346
Query: 141 ---ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
++ L+ + L+ N+ ++IT + + L NL+ + N +T++ +++
Sbjct: 347 QGELSRTFDLISAMPALRTLNISNSKITKIPGN-VSKLKNLEYFYMYGNDLTALPAAIGQ 405
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LTKL L +S N+ + L I L+ L ++LSY I
Sbjct: 406 LTKLKSLSVSSNKNFKTLPPTIGALRNLDRLELSYTAI 443
>gi|354491100|ref|XP_003507694.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog, partial
[Cricetulus griseus]
Length = 1656
Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ LITL L N + + + +F + +L +G N+
Sbjct: 130 LALNDVSLQALPG-------DVGNLANLITLELRENLLKSLPASLSFLVKLEQLDLGGND 182
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 183 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 242
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 243 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 301
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 302 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 344
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 81 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 140
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 141 PGDVGNLANLITLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 200
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 201 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 258
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 259 IGQLKQLSILKVDQNRL 275
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 268 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 327
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 328 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 384
Query: 184 QNNQITSM 191
NQ M
Sbjct: 385 AENQAQPM 392
>gi|126352334|ref|NP_001075308.1| biglycan precursor [Equus caballus]
gi|8134615|sp|O46403.1|PGS1_HORSE RecName: Full=Biglycan; AltName: Full=Bone/cartilage proteoglycan
I; AltName: Full=PG-S1; Flags: Precursor
gi|2662531|gb|AAB88305.1| biglycan [Equus caballus]
Length = 372
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 109 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 168
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ Q G L+L L I + +L +P
Sbjct: 169 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFQPGAFDGLKLNYLRISEAKLTGIP 228
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 229 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 285
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 286 LHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR-----AYYNGIS 340
Query: 237 KF 238
F
Sbjct: 341 LF 342
>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 595
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK++ ++G L
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGF---STLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKN 423
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 484 LK-EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFT-VLPKEIGKLKKLQT 541
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 542 LDLRNNQLTTLPT 554
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T + + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+LQ+NQ+ ++ + L L LYL +N+LT F
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N L ++ + + L +L L L N L+ L ++G L LQ L + QN L+
Sbjct: 401 LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIF 460
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I+ +L L + N+ T+ + L LQ N+ NQ+T + + + QNL LD
Sbjct: 461 PAEIEQLKKLQKLDLSVNQFTTFLKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELD 520
Query: 180 --------------------SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
++ L+NNQ+T++ + + L L +LYL +NQL+ + I
Sbjct: 521 LNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERI 580
Query: 220 RGLKRLRT 227
R L L+
Sbjct: 581 RKLLPLKC 588
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T+L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + L L L N+LT L ++ L+ L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLQNLQTLNL 285
Query: 231 SYNKINKF 238
N++ F
Sbjct: 286 VNNRLTVF 293
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I+ L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 197
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +KL + N LT+L + L +L L L +N+ +L ++G L LQ
Sbjct: 154 TFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQT 213
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L ++ NQL LP +I L LY NNR+T + L LQ+ N++T + +
Sbjct: 214 LNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK- 272
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
E L NL +++L NN++T + L L L L N
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L L ++ L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L NQ T L +I L+ L+T++L N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTT-LPKEIGQLQNLQTLNLQDNQL 221
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL---HNL 178
P ++ L +L NNR+T + L LQ + N ++ R Q L NL
Sbjct: 271 PKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPFSLKERKRIQKLFPDSNL 330
Query: 179 D 179
D
Sbjct: 331 D 331
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 46 VNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
VN T + E ++ L++ N LT+L + L +L L LN+N+ L ++G L
Sbjct: 477 VNQFTTFLKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKL 536
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
KLQ L + NQL LP++I L LY NN+++
Sbjct: 537 KKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
>gi|444709489|gb|ELW50501.1| Leucine-rich repeat protein SHOC-2 [Tupaia chinensis]
Length = 535
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 109 RSIHI-------LPTSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 161
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 162 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLPKLIMLS 220
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 221 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 272
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 126 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 185
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L KL + ++ N+I + E L NL ++ +
Sbjct: 186 VVYRLDSLTTLYLRFNRITTVEKDIKNLPKLIMLSIRENKIKQLPA-EIGELCNLITLDV 244
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 245 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLCSLNRLGLRYNRLSAI 298
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L L L + N++K L ++G L L L + NQLE LP +
Sbjct: 196 LYLRFNRITTVEKDIKNLPKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 255
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L L + +N+++ + R L+ ++L+
Sbjct: 256 IGNCTQITNLDLQHNELLDLPDTIGNLCSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 314
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 315 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 374
Query: 242 NEGK 245
+ K
Sbjct: 375 SRAK 378
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 37/234 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLN 86
D+K P LI L + N I + P I +L V N L L + T +
Sbjct: 209 DIKNLPKLIMLSIRENKIKQL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 263
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G L L L + N+L A+P + S L L NN I++L +
Sbjct: 264 NLDLQHNELLDLPDTIGNLCSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPE 323
Query: 146 GLLRGLTKL----------QVF--------------NMDFNQITMVRRDEFQNLHNLDSI 181
LL L KL Q++ NM+ N+I + F L +
Sbjct: 324 SLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKL 383
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL L + L+ N++
Sbjct: 384 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLISLEKLVLTNNQL 436
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L NN+L +L +G L+ L L + +N L
Sbjct: 402 SMVELNLATNQLTKIPEDVSGLISLEKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTH 461
Query: 121 LPSDIQLFSQLGSLYANNNR-ITSLDGLLRGLTKLQVFNMD 160
LP +I L LY N+N + SL L +KL + +++
Sbjct: 462 LPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIE 502
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L+ L + +N+L SL GT + + L + NQL +P D+ L L NN++T+L
Sbjct: 380 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLISLEKLVLTNNQLTTL 439
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ-ITSMNSSLSGLTKLAY 203
+ LT L + N +T + +E L NL+ + L +N + S+ L+ +KL+
Sbjct: 440 PRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 498
Query: 204 LYLSHNQLTEFLLDDIRG 221
+ + + L+ + G
Sbjct: 499 MSIENCPLSHLPPQIVAG 516
>gi|402911807|ref|XP_003918496.1| PREDICTED: biglycan isoform 1 [Papio anubis]
gi|402911809|ref|XP_003918497.1| PREDICTED: biglycan isoform 2 [Papio anubis]
Length = 368
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|355705268|gb|EHH31193.1| hypothetical protein EGK_21074 [Macaca mulatta]
gi|355757804|gb|EHH61329.1| hypothetical protein EGM_19317 [Macaca fascicularis]
gi|380787421|gb|AFE65586.1| biglycan preproprotein [Macaca mulatta]
gi|384941154|gb|AFI34182.1| biglycan preproprotein [Macaca mulatta]
Length = 368
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|426397856|ref|XP_004065120.1| PREDICTED: biglycan isoform 1 [Gorilla gorilla gorilla]
gi|426397858|ref|XP_004065121.1| PREDICTED: biglycan isoform 2 [Gorilla gorilla gorilla]
Length = 368
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|428182313|gb|EKX51174.1| hypothetical protein GUITHDRAFT_66212 [Guillardia theta CCMP2712]
Length = 556
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGL-TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R L + NNLT L +SL L TDL L + +N+++SL ++ LS L +L +E N L+
Sbjct: 339 LRSLRLSGNNLTMLPDSLSELFTDLVLLSVAHNKVESLTDRISVLSNLTVLELEDNLLQH 398
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP ++ L L N N+ S ++ L+ LQ+ N+ NQI +V + L
Sbjct: 399 LPQSLEGNRSLVKLTLNRNQFQSFPEVIFDLSGLQILNLALNQIELVPEALCEANTALKL 458
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++LQ+NQI ++ S++ + L L L+ N + L I +RLR + LS N + F
Sbjct: 459 LALQHNQIHALPSNIGLMANLILLDLTQNHIIS-LPSSISACQRLRALFLSGNPLPSF 515
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I +L + +N +++L + LT L L L++N + SL Q+G L+ ++ L + N L++L
Sbjct: 14 ITRLSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSFNMLDSL 73
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L ++NR+++L + L+ L ++ + V D +N ++ +
Sbjct: 74 PKEMSSLPDWSKLLLSHNRLSTLPPSISRLSSLTHADLSDFGLQAVPPDLLEN-SSIRVV 132
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +NQI+S+ S+ T L L L N++ L I L ++DL +N++ +
Sbjct: 133 LLGHNQISSLPPSVQTWTSLVELCLQGNRINR-LPASIGFCTALTSLDLRHNRLRRL 188
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L V N L L LR LT L L N+N L+ + ++G L L + N+L L
Sbjct: 224 LRSLRVDHNILEMLPPGLRFLTSLTELLANDNMLEEVCPEIGACVHLTRLNLHANKLVTL 283
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL-QVFNMDFNQITMVRRDEFQNLHNLDS 180
P I S L L + N+I L + T L ++F++ N++ + + NL L S
Sbjct: 284 PHTIGNCSLLTQLTIHQNKI-KLPEEIGHFTLLDELFSICDNELVEI-PESVGNLVRLRS 341
Query: 181 ISLQNNQITSMNSSLSGL-TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
+ L N +T + SLS L T L L ++HN++ E L D I L L ++L N +
Sbjct: 342 LRLSGNNLTMLPDSLSELFTDLVLLSVAHNKV-ESLTDRISVLSNLTVLELEDNLLQHLP 400
Query: 240 TRNEG 244
EG
Sbjct: 401 QSLEG 405
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 32/200 (16%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL-- 108
+ PP I ++L + FN L SL + L D + L L++NRL +L + LS L
Sbjct: 49 SLPPQIGQLTSMKQLDLSFNMLDSLPKEMSSLPDWSKLLLSHNRLSTLPPSISRLSSLTH 108
Query: 109 ---------------------QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+++++ NQ+ +LP +Q ++ L L NRI L
Sbjct: 109 ADLSDFGLQAVPPDLLENSSIRVVLLGHNQISSLPPSVQTWTSLVELCLQGNRINRLPAS 168
Query: 148 LRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
+ T L ++ N++ + + + L+ L + +N I + + L LT+L L
Sbjct: 169 IGFCTALTSLDLRHNRLRRLPPEMGRMRALNKLLLLGQHHNSIKDLPTDLDRLTRLRSLR 228
Query: 206 LSHNQLTEFLLDDIRGLKRL 225
+ HN L E L +R L L
Sbjct: 229 VDHNIL-EMLPPGLRFLTSL 247
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
++S + L + N++ LP+ I +QL SL ++N ITSL + LT ++ ++ FN
Sbjct: 10 SISWITRLSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSFNM 69
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL----DDI 219
+ + + E +L + + L +N+++++ S+S L+ L+H L++F L D+
Sbjct: 70 LDSLPK-EMSSLPDWSKLLLSHNRLSTLPPSISRLSS-----LTHADLSDFGLQAVPPDL 123
Query: 220 RGLKRLRTVDLSYNKINKF 238
+R V L +N+I+
Sbjct: 124 LENSSIRVVLLGHNQISSL 142
>gi|322785821|gb|EFZ12440.1| hypothetical protein SINV_04279 [Solenopsis invicta]
Length = 238
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
PT+R L + NN T+L N + T L L ++NRL +L G LG L KL+ L NQ++
Sbjct: 38 PTLRTLDLSENNFTTLPNEIGDFTLLRQLNFSHNRLTALPGTLGALEKLEGLNCSANQIK 97
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
++PS + S L + ++N+I+ + GL L V ++ N++T V D LH ++
Sbjct: 98 SIPSSLANLSHLKQVNLSDNQISDFPLMFCGLRHLDVLDLSKNRLTFV-PDAAAGLHVVE 156
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++L NQI +++ L+ +L L L N L
Sbjct: 157 -LNLNQNQIATISEKLADCPRLKTLRLEENCL 187
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L + +N LP++I F+ L L ++NR+T+L G L L KL+ N NQI +
Sbjct: 40 LRTLDLSENNFTTLPNEIGDFTLLRQLNFSHNRLTALPGTLGALEKLEGLNCSANQIKSI 99
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
NL +L ++L +NQI+ GL L L LS N+LT F+ D G L
Sbjct: 100 P-SSLANLSHLKQVNLSDNQISDFPLMFCGLRHLDVLDLSKNRLT-FVPDAAAG---LHV 154
Query: 228 VDLSYNKINKFGTRNE 243
V+L+ N+ N+ T +E
Sbjct: 155 VELNLNQ-NQIATISE 169
>gi|348555820|ref|XP_003463721.1| PREDICTED: protein scribble homolog isoform 1 [Cavia porcellus]
Length = 1653
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F ++ N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ +L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|332260514|ref|XP_003279331.1| PREDICTED: biglycan isoform 1 [Nomascus leucogenys]
Length = 368
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKRAY-----YNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|351698433|gb|EHB01352.1| scribble-like protein, partial [Heterocephalus glaber]
Length = 1615
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 117 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 169
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ L
Sbjct: 170 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLL 229
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 230 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 288
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 289 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 331
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 68 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 127
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 128 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 187
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L D
Sbjct: 188 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQN-LLQRLPDG 245
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 246 IGQLKQLSILKVDQNRL 262
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 255 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 314
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 315 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 371
Query: 184 QNNQITSM 191
NQ M
Sbjct: 372 AENQAQPM 379
>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
Length = 349
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 22/224 (9%)
Query: 29 LTSDDLKGTPA-------LITLLLVNNNITHIHENAFPPT-------IRKLHVGFNNLTS 74
L + L+ PA L L L N +T I PT +++L++ N L
Sbjct: 84 LAGNQLREVPAELGQLRSLQELYLSGNQLTGI------PTELGQLRGLQELYLSGNQLRE 137
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
+ L L DL+ L L+ N+L+ + +LG L L +L + NQL +P+++ S+L L
Sbjct: 138 VPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKL 197
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y N++ + L L LQ + NQ+ V E L +L + L NQ+T + +
Sbjct: 198 YLAGNQLREVPAELGQLRGLQELYLSGNQLREV-PTELGQLRDLQELDLSGNQLTGIPTE 256
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L L LYL+ NQL E + ++ L+ L +DLS N++ +
Sbjct: 257 LGQLCGLQDLYLAGNQLRE-VPAELGQLRDLHMLDLSGNQLREV 299
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + + +T + E ++++L++ N L + L L L L+L N+L+ +
Sbjct: 33 LITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLREV 92
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+LG L LQ L + NQL +P+++ L LY + N++ + L L L + +
Sbjct: 93 PAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHMLD 152
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL--L 216
+ NQ+ V E L +L + L NQ+ + + L L++L LYL+ NQL E L
Sbjct: 153 LSGNQLREVPA-ELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAEL 211
Query: 217 DDIRGLKRLRTVDLSYNKINKFGT 240
+RGL+ L LS N++ + T
Sbjct: 212 GQLRGLQELY---LSGNQLREVPT 232
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L +++ L + +LG L LQ L + NQL +P+++ L LY N++
Sbjct: 30 LGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQL 89
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
+ L L LQ + NQ+T + E L L + L NQ+ + + L L L
Sbjct: 90 REVPAELGQLRSLQELYLSGNQLTGI-PTELGQLRGLQELYLSGNQLREVPTELGQLRDL 148
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LS NQL E + ++ L+ L +DLS N++ +
Sbjct: 149 HMLDLSGNQLRE-VPAELGQLRDLHMLDLSGNQLREV 184
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ N L + L L L L+L+ N+L+ + +LG L LQ L + NQL +
Sbjct: 194 LEKLYLAGNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGI 253
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+++ L LY N++ + L L L + ++ NQ+ V E L L +
Sbjct: 254 PTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPA-ELGQLSRLHAF 312
Query: 182 SLQNN 186
+++N
Sbjct: 313 CIEDN 317
>gi|270002774|gb|EEZ99221.1| hypothetical protein TcasGA2_TC000625 [Tribolium castaneum]
Length = 1360
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 38 PALITLLLVNNNITHIHENAFP---PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNN 93
P L L L N + IH+ A P++ ++H+ NLT + + DL ++L N
Sbjct: 881 PGLAWLNLTGNPLVRIHDIASSHRYPSLEEIHISHTNLTIVTSKDFENFPDLLHVYLGFN 940
Query: 94 RLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLLRGL 151
R+ + G G+L L L + N+LE LP + +Q + L L +NR+ L+ L
Sbjct: 941 RISRISPGAFGSLPHLLTLDLGVNELELLPQERLQGLNHLRILNLTHNRLKDLEEFPTDL 1000
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQ 210
LQV ++ FNQI + + FQ+L NL + L N ITS+ N + L KL L LS N
Sbjct: 1001 RSLQVLDISFNQIGRISKVTFQHLENLAELFLYGNWITSVSNEAFRPLKKLRTLDLSRNY 1060
Query: 211 LTEFLLDDIRGLK 223
L L+ R L+
Sbjct: 1061 LENIPLNAFRPLE 1073
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 60 PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK-LQLLVIEQNQ 117
P +R L V NN + L +L GL L + L + L ++ +K L + + N
Sbjct: 687 PGLRVLKVSNNNFSDLFAEALNGLPSLQVIQLEGCAVVKLPKEIFLKNKNLLKIDLSHNF 746
Query: 118 LEALPSDIQL----FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
+ LP I L F +L L +N + LL ++ +++ ++ FNQ+T V
Sbjct: 747 VAELPHGIFLNLNVFKEL-KLSSNAFKELPYTALL-NISTMEILSLSFNQMTSVDISRLN 804
Query: 174 NLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
L NL + L+NNQI+S++ + S LT++ + LS N L+ + +R +DLS
Sbjct: 805 GLPNLKELDLRNNQISSLSGFASSNLTQVLSVDLSGNSLSALPANFFHHSPLMRRMDLSN 864
Query: 233 NKINK 237
N+ +
Sbjct: 865 NRFRQ 869
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 18/227 (7%)
Query: 19 DLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN 76
DLEP T T +L + L NN + +H F P + +LH+ N + +++
Sbjct: 414 DLEPGT---------FDKTISLREIRLHNNRLQSVHRGVFDPLPALLELHLQNNEIATID 464
Query: 77 N-SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE--QNQLEALPSD-IQLFSQLG 132
+ + R L L + L N + L G + L+ I+ N + L +D ++ S +
Sbjct: 465 SGAFRTLQSLQHVNLQGNVISEL-GDVFMHESPSLVSIQLDSNSITRLHNDSLRGQSSVQ 523
Query: 133 SLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
++ +NR+ LD L R L +Q + N I + F+ + L + L NQ+ +
Sbjct: 524 IMWLGHNRLRRLDSALFRDLLLIQRVYLTNNSIAFIEDHAFEPMQALKFLDLGLNQLKEI 583
Query: 192 NS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ + + L +L L+L HN + + LK+LR +DLS+N + +
Sbjct: 584 TTRTFAELHELEELFLPHNNIASIEPRALTNLKKLRVLDLSFNHLTR 630
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 52 HIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK---L 108
H+ N P R L +NLTSL+ D NW + LE GT K L
Sbjct: 382 HLSSNFVPHIPRDLFHQNHNLTSLS------LDSNW-------ISDLEP--GTFDKTISL 426
Query: 109 QLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITM 166
+ + + N+L+++ + L L+ NN I ++D G R L LQ N+ N I+
Sbjct: 427 REIRLHNNRLQSVHRGVFDPLPALLELHLQNNEIATIDSGAFRTLQSLQHVNLQGNVISE 486
Query: 167 VRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ +L SI L +N IT + N SL G + + ++L HN+L R L +
Sbjct: 487 LGDVFMHESPSLVSIQLDSNSITRLHNDSLRGQSSVQIMWLGHNRLRRLDSALFRDLLLI 546
Query: 226 RTVDLSYNKI 235
+ V L+ N I
Sbjct: 547 QRVYLTNNSI 556
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 84/158 (53%), Gaps = 6/158 (3%)
Query: 37 TPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNN 93
+P+L+++ L +N+IT +H ++ +++ + +G N L L+++L R L + ++L NN
Sbjct: 495 SPSLVSIQLDSNSITRLHNDSLRGQSSVQIMWLGHNRLRRLDSALFRDLLLIQRVYLTNN 554
Query: 94 RLKSLEGQ-LGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLDG-LLRG 150
+ +E + L+ L + NQL+ + + +L L+ +N I S++ L
Sbjct: 555 SIAFIEDHAFEPMQALKFLDLGLNQLKEITTRTFAELHELEELFLPHNNIASIEPRALTN 614
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
L KL+V ++ FN +T + D FQ + ++L N I
Sbjct: 615 LKKLRVLDLSFNHLTRLHDDIFQEGLPIRVLNLMNCSI 652
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 105 LSKLQLLVIEQNQLEALPSDI---QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L LQ L + N E L D Q SLY N D + LTKL+ ++
Sbjct: 232 LESLQFLDLSSNNFEKLGEDCFRPCPSVQTLSLYYNVIESVHPDTFV-SLTKLESLDLSH 290
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N+I + FQ L SI L +N + ++ + L L L+LS N + E D
Sbjct: 291 NKIVFLDASTFQTNKKLRSIDLSHNHVHYISGVFAFLPDLKELFLSENNILEIPSDAFSD 350
Query: 222 LKRLRTVDLSYNKINK 237
L + L N I +
Sbjct: 351 SSNLSVIYLQQNAIRR 366
>gi|348555824|ref|XP_003463723.1| PREDICTED: protein scribble homolog isoform 3 [Cavia porcellus]
Length = 1601
Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F ++ N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ +L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|327263157|ref|XP_003216387.1| PREDICTED: protein LAP2-like isoform 1 [Anolis carolinensis]
Length = 1363
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLAIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T++ +
Sbjct: 194 NEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+L + L +N + + S+ L KLA L + NQL +L D I GL + +D S+N+I
Sbjct: 254 SLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLM-YLPDSIGGLTSVEELDCSFNEIE 312
Query: 237 KFGT 240
+
Sbjct: 313 ALPS 316
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ +L + G L L L++N L+ L +G L KL +L I++NQL LP
Sbjct: 235 LDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I GLT ++ + FN+I + Q L N+ + +
Sbjct: 295 IG-----------------------GLTSVEELDCSFNEIEALPSSVGQ-LSNIRTFAAD 330
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N +T + + + L+L N+L EFL +++ +++L+ ++LS N++
Sbjct: 331 HNFLTQLPPEIGNWKYVTVLFLHSNKL-EFLPEEMGDMQKLKVINLSDNRL 380
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG-LKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT L+ G LK L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLT--LIPGFMGSLKHLIYLDVSKNNI 242
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLAIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTEV 199
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
IR N LT L + + LFL++N+L+ L ++G + KL+++ + N+L+ L
Sbjct: 324 IRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYL 383
Query: 122 PSDIQLFSQLGSLYANNNRITSL 144
P QL +++ ++N+ L
Sbjct: 384 PYSFTKLQQLTAMWLSDNQSKPL 406
>gi|193787600|dbj|BAG52806.1| unnamed protein product [Homo sapiens]
Length = 307
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 44 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 103
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 104 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 163
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 164 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 220
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 221 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 275
Query: 237 KF 238
F
Sbjct: 276 LF 277
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 39 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 97
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 98 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 155
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 156 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 204
>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 395
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ PP I + L + + + L +++ L L +L+++ N+L L + L++LQ
Sbjct: 86 DTLPPCIGSLKFLQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQ 145
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
++ +E N+L +PS+I L L N I+++ L L++L+V ++D NQI +
Sbjct: 146 VIDLEGNKLTRIPSEIGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPY 205
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL-TEFLLDDIRG-LKRLRT 227
L +L + L+NN I S+ L + KL +LY+S+N+L + F G L+ L+T
Sbjct: 206 -AIGGLRSLKYLYLRNNLIDSLPDELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKT 264
Query: 228 VDLSYNKI 235
+DLS NK+
Sbjct: 265 LDLSKNKL 272
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N + +L + L L L L +++ L +G L L+ L ++ N+L L
Sbjct: 75 LQMLDLGLNQIDTLPPCIGSLKFLQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I+ +QL + N++T + + L L+V +++ N I+ + + NL L+ +
Sbjct: 135 PKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGISTI-PSQLGNLSQLEVL 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L +NQI + ++ GL L YLYL +N L + L D+++ + +L + +S N+++
Sbjct: 194 DLDSNQIKQIPYAIGGLRSLKYLYLRNN-LIDSLPDELKNMVKLEHLYVSNNRLD 247
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 30/210 (14%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L + N ++++ + L L+ L L L++N++K + +G L L+ L + N +++
Sbjct: 166 SLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDS 225
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN-MDFNQITMVR----------- 168
LP +++ +L LY +NNR+ S R L KLQ +D ++ +VR
Sbjct: 226 LPDELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNL 285
Query: 169 -------------RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
D + NL+ + L+NNQ+T + S+ L KL L L +NQLT L
Sbjct: 286 KTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKLILRNNQLT-VL 344
Query: 216 LDDIRGLKRLRTVDLSYNKINKFGTRNEGK 245
++I +K L+ +DL N F T E +
Sbjct: 345 PEEIAQMKNLKELDLRGN----FTTPTESQ 370
>gi|397466293|ref|XP_003804899.1| PREDICTED: biglycan isoform 1 [Pan paniscus]
gi|397466295|ref|XP_003804900.1| PREDICTED: biglycan isoform 2 [Pan paniscus]
gi|397466297|ref|XP_003804901.1| PREDICTED: biglycan isoform 3 [Pan paniscus]
gi|410358006|gb|JAA44590.1| biglycan [Pan troglodytes]
Length = 368
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|91077038|ref|XP_967720.1| PREDICTED: similar to leucine-rich transmembrane protein [Tribolium
castaneum]
Length = 1359
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 38 PALITLLLVNNNITHIHENAFP---PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNN 93
P L L L N + IH+ A P++ ++H+ NLT + + DL ++L N
Sbjct: 880 PGLAWLNLTGNPLVRIHDIASSHRYPSLEEIHISHTNLTIVTSKDFENFPDLLHVYLGFN 939
Query: 94 RLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLLRGL 151
R+ + G G+L L L + N+LE LP + +Q + L L +NR+ L+ L
Sbjct: 940 RISRISPGAFGSLPHLLTLDLGVNELELLPQERLQGLNHLRILNLTHNRLKDLEEFPTDL 999
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQ 210
LQV ++ FNQI + + FQ+L NL + L N ITS+ N + L KL L LS N
Sbjct: 1000 RSLQVLDISFNQIGRISKVTFQHLENLAELFLYGNWITSVSNEAFRPLKKLRTLDLSRNY 1059
Query: 211 LTEFLLDDIRGLK 223
L L+ R L+
Sbjct: 1060 LENIPLNAFRPLE 1072
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 60 PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK-LQLLVIEQNQ 117
P +R L V NN + L +L GL L + L + L ++ +K L + + N
Sbjct: 686 PGLRVLKVSNNNFSDLFAEALNGLPSLQVIQLEGCAVVKLPKEIFLKNKNLLKIDLSHNF 745
Query: 118 LEALPSDIQL----FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
+ LP I L F +L L +N + LL ++ +++ ++ FNQ+T V
Sbjct: 746 VAELPHGIFLNLNVFKEL-KLSSNAFKELPYTALL-NISTMEILSLSFNQMTSVDISRLN 803
Query: 174 NLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
L NL + L+NNQI+S++ + S LT++ + LS N L+ + +R +DLS
Sbjct: 804 GLPNLKELDLRNNQISSLSGFASSNLTQVLSVDLSGNSLSALPANFFHHSPLMRRMDLSN 863
Query: 233 NKINK 237
N+ +
Sbjct: 864 NRFRQ 868
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 52 HIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK---L 108
H+ N P R L +NLTSL+ D NW + LE GT K L
Sbjct: 381 HLSSNFVPHIPRDLFHQNHNLTSLS------LDSNW-------ISDLEP--GTFDKTISL 425
Query: 109 QLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITM 166
+ + + N+L+++ + L L+ NN I ++D G R L LQ N+ N I+
Sbjct: 426 REIRLHNNRLQSVHRGVFDPLPALLELHLQNNEIATIDSGAFRTLQSLQHVNLQGNVISE 485
Query: 167 VRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
+ +L SI L +N IT + N SL G + + ++L HN+L R L +
Sbjct: 486 LGDVFMHESPSLVSIQLDSNSITRLHNDSLRGQSSVQIMWLGHNRLRRLDSALFRDLLLI 545
Query: 226 RTVDLSYNKI 235
+ V L+ N I
Sbjct: 546 QRVYLTNNSI 555
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 18/227 (7%)
Query: 19 DLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN 76
DLEP T T +L + L NN + +H F P + +LH+ N + +++
Sbjct: 413 DLEPGT---------FDKTISLREIRLHNNRLQSVHRGVFDPLPALLELHLQNNEIATID 463
Query: 77 N-SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE--QNQLEALPSD-IQLFSQLG 132
+ + R L L + L N + L G + L+ I+ N + L +D ++ S +
Sbjct: 464 SGAFRTLQSLQHVNLQGNVISEL-GDVFMHESPSLVSIQLDSNSITRLHNDSLRGQSSVQ 522
Query: 133 SLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
++ +NR+ LD L R L +Q + N I + F+ + L + L NQ+ +
Sbjct: 523 IMWLGHNRLRRLDSALFRDLLLIQRVYLTNNSIAFIEDHAFEPMQALKFLDLGLNQLKEI 582
Query: 192 NS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ + + L +L L+L HN + + LK+LR +DLS+N + +
Sbjct: 583 TTRTFAELHELEELFLPHNNIASIEPRALTNLKKLRVLDLSFNHLTR 629
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 84/158 (53%), Gaps = 6/158 (3%)
Query: 37 TPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNN 93
+P+L+++ L +N+IT +H ++ +++ + +G N L L+++L R L + ++L NN
Sbjct: 494 SPSLVSIQLDSNSITRLHNDSLRGQSSVQIMWLGHNRLRRLDSALFRDLLLIQRVYLTNN 553
Query: 94 RLKSLEGQ-LGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLDG-LLRG 150
+ +E + L+ L + NQL+ + + +L L+ +N I S++ L
Sbjct: 554 SIAFIEDHAFEPMQALKFLDLGLNQLKEITTRTFAELHELEELFLPHNNIASIEPRALTN 613
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
L KL+V ++ FN +T + D FQ + ++L N I
Sbjct: 614 LKKLRVLDLSFNHLTRLHDDIFQEGLPIRVLNLMNCSI 651
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 105 LSKLQLLVIEQNQLEALPSDI---QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L LQ L + N E L D Q SLY N D + LTKL+ ++
Sbjct: 231 LESLQFLDLSSNNFEKLGEDCFRPCPSVQTLSLYYNVIESVHPDTFV-SLTKLESLDLSH 289
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N+I + FQ L SI L +N + ++ + L L L+LS N + E D
Sbjct: 290 NKIVFLDASTFQTNKKLRSIDLSHNHVHYISGVFAFLPDLKELFLSENNILEIPSDAFSD 349
Query: 222 LKRLRTVDLSYNKINK 237
L + L N I +
Sbjct: 350 SSNLSVIYLQQNAIRR 365
>gi|348555822|ref|XP_003463722.1| PREDICTED: protein scribble homolog isoform 2 [Cavia porcellus]
Length = 1629
Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F ++ N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQN-LLQRLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ +L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|119593268|gb|EAW72862.1| biglycan, isoform CRA_b [Homo sapiens]
Length = 394
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 131 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 190
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 191 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 250
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 251 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 307
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 308 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 362
Query: 237 KF 238
F
Sbjct: 363 LF 364
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 126 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 184
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 185 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 242
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 243 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 291
>gi|62896527|dbj|BAD96204.1| biglycan preproprotein variant [Homo sapiens]
Length = 368
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPEGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + +G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPEGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|344306145|ref|XP_003421749.1| PREDICTED: LOW QUALITY PROTEIN: biglycan-like [Loxodonta africana]
Length = 369
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNRISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL + N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNTNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + +NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGYNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NNR+ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNRISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNTNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L YN+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGYNQI 266
>gi|4502403|ref|NP_001702.1| biglycan preproprotein [Homo sapiens]
gi|266762|sp|P21810.2|PGS1_HUMAN RecName: Full=Biglycan; AltName: Full=Bone/cartilage proteoglycan
I; AltName: Full=PG-S1; Flags: Precursor
gi|306884|gb|AAA36009.1| proteoglycan I precursor [Homo sapiens]
gi|12803217|gb|AAH02416.1| Biglycan [Homo sapiens]
gi|13279002|gb|AAH04244.1| Biglycan [Homo sapiens]
gi|30583485|gb|AAP35987.1| biglycan [Homo sapiens]
gi|60655835|gb|AAX32481.1| biglycan [synthetic construct]
gi|60655837|gb|AAX32482.1| biglycan [synthetic construct]
gi|117646184|emb|CAL38559.1| hypothetical protein [synthetic construct]
gi|117646732|emb|CAL37481.1| hypothetical protein [synthetic construct]
gi|119593269|gb|EAW72863.1| biglycan, isoform CRA_c [Homo sapiens]
gi|119593270|gb|EAW72864.1| biglycan, isoform CRA_c [Homo sapiens]
gi|123981990|gb|ABM82824.1| biglycan [synthetic construct]
gi|123996817|gb|ABM86010.1| biglycan [synthetic construct]
gi|208965880|dbj|BAG72954.1| biglycan [synthetic construct]
Length = 368
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
Length = 595
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 14/193 (7%)
Query: 57 AFPPTIRKLH---------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
+FP I K GF ++L + L +L +L L N LK + ++G L
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGF---STLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRN 423
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L +E N+LE LP +I L L + N + + L KLQ ++ NQ T
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
+ E L NL +++LQ NQ+T++ + + L L L L+ NQ T L +I LK+L+T
Sbjct: 484 PK-EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFT-VLPKEIGKLKKLQT 541
Query: 228 VDLSYNKINKFGT 240
+DL N++ T
Sbjct: 542 LDLRNNQLTTLPT 554
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N L + + + L +L L L N L+ L ++G L LQ L + QN L+
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIF 460
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P++I+ +L L + N+ T+ + L LQ N+ NQ+T + + + QNL LD
Sbjct: 461 PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELD 520
Query: 180 --------------------SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
++ L+NNQ+T++ + + L L +LYL +NQL+ + I
Sbjct: 521 LNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERI 580
Query: 220 RGLKRLRT 227
R L L+
Sbjct: 581 RKLLPLKC 588
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L + + L L L L+ NRL L ++G L LQ L + +N+L
Sbjct: 96 LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + NR+T+L + L LQ ++ NQ T + + E L NL ++
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK-EIGQLQNLQTL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+L +NQ+ ++ + L L LYL +N+LT F
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +L + N L L N + L +L L L N+L + ++G L LQ
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +N+L ALP +I L +L +N+ T+L + L LQ N+ NQ+ +
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPV- 226
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L NL + L+NN++T + L L L N+LT L ++ L+ L+T++L
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTA-LPKEMGQLQNLQTLNL 285
Query: 231 SYNKINKF 238
N++ F
Sbjct: 286 VNNRLTVF 293
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L +N+ +L ++G L LQ L + NQL L
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATL 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T + L LQ+ N++T + + E L NL ++
Sbjct: 225 PVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK-EMGQLQNLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+L NN++T + L L L L N L+
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 314
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L +L ++G L LQ L ++ N L LP +I L L
Sbjct: 40 LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L KL+ ++ N++ ++ +E L NL + L N++T+
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRL-IILPNEIGRLQNLQDLGLYKNKLTTFPKE 158
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ L L L+LS N+LT L +I LK L+T+DL N+
Sbjct: 159 IGQLQNLQKLWLSENRLTA-LPKEIGQLKNLQTLDLQDNQ 197
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L N L +L ++G L LQ L + NQL
Sbjct: 47 PLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQL 106
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P+ I +L SL + NR+ L + L LQ + N++T + E L NL
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK-EIGQLQNL 165
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T++ + L L L L NQ T L +I L+ L+T++LS N++
Sbjct: 166 QKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTT-LPKEIGQLQNLQTLNLSDNQL 221
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L +L + L +L L+L NNRL ++G L LQ+L +N+L AL
Sbjct: 211 LQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTAL 270
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P ++ L +L NNR+T + L LQ + N +++ R Q L S+
Sbjct: 271 PKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSL 330
Query: 182 SLQ 184
L+
Sbjct: 331 DLR 333
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL + N LT+L + L +L L LN+N+ L ++G L KLQ
Sbjct: 482 TFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQT 541
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L + NQL LP++I L LY NN+++
Sbjct: 542 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 573
>gi|197099861|ref|NP_001125588.1| biglycan precursor [Pongo abelii]
gi|55728554|emb|CAH91019.1| hypothetical protein [Pongo abelii]
gi|55728673|emb|CAH91076.1| hypothetical protein [Pongo abelii]
Length = 368
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ +N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLGHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLAGVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKRAY-----YNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLGHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|345310727|ref|XP_001521360.2| PREDICTED: leucine-rich repeat and death domain-containing protein
1-like, partial [Ornithorhynchus anatinus]
Length = 746
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R++H+G N L SL+ S+ L +L L L +N K++ ++GT S L+ L + N L L
Sbjct: 381 LREVHLGSNKLESLSPSIGNLQELRVLLLWDNLFKTITEKIGTCSLLEKLDLRGNGLTQL 440
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + + +L LY N++ L+ + L L V + N I V E +N L +
Sbjct: 441 PPNFRRLQKLKELYVGRNQLGRLEEHISRLKDLSVLEISGNGIAHVPV-EIKNCGQLTRV 499
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L N++ L+ L L YL L+ N+++E + ++I ++RL ++L N++ F
Sbjct: 500 DLSANELGQFPLGLTALAALNYLNLNGNEISE-IPEEISEMERLIHLELRQNRLTSF 555
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L G N L L GL +L+ L L N LKS+ + L +LQ+L ++ NQLE
Sbjct: 266 LRQLFCGHNLLEEFPAVLGGLENLDILDLAGNNLKSVPESITRLQRLQVLHLDSNQLEIF 325
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + +L L + N I+SL ++ L L+ M+ NQ+T + FQ L L +
Sbjct: 326 PKALCYLPKLTGLSLSGNAISSLPKDIKELRNLEELAMNHNQLTFLPGQFFQ-LLKLREV 384
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +N++ S++ S+ L +L L L N L + + + I L +DL N + +
Sbjct: 385 HLGSNKLESLSPSIGNLQELRVLLLWDN-LFKTITEKIGTCSLLEKLDLRGNGLTQL 440
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 26/203 (12%)
Query: 57 AFPPTIRK-LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQ 115
FP I + L+ N++ +L L+ L L L L L ++G L+ L++L I+
Sbjct: 191 VFPEGISESLYAKRNSIRGFPPNLDSLSGLEELCLERIDLTCLPPEIGQLANLRVLNIDH 250
Query: 116 NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT----------------------- 152
NQ+ +LP ++ L L+ +N + +L GL
Sbjct: 251 NQIASLPKEVGRLVGLRQLFCGHNLLEEFPAVLGGLENLDILDLAGNNLKSVPESITRLQ 310
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+LQV ++D NQ+ + + L L +SL N I+S+ + L L L ++HNQLT
Sbjct: 311 RLQVLHLDSNQLEIFPK-ALCYLPKLTGLSLSGNAISSLPKDIKELRNLEELAMNHNQLT 369
Query: 213 EFLLDDIRGLKRLRTVDLSYNKI 235
FL L +LR V L NK+
Sbjct: 370 -FLPGQFFQLLKLREVHLGSNKL 391
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 10/218 (4%)
Query: 29 LTSDDLKGTPALIT------LLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLR 80
L ++LK P IT +L +++N I A + P + L + N ++SL ++
Sbjct: 294 LAGNNLKSVPESITRLQRLQVLHLDSNQLEIFPKALCYLPKLTGLSLSGNAISSLPKDIK 353
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L +L L +N+N+L L GQ L KL+ + + N+LE+L I +L L +N
Sbjct: 354 ELRNLEELAMNHNQLTFLPGQFFQLLKLREVHLGSNKLESLSPSIGNLQELRVLLLWDNL 413
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
++ + + L+ ++ N +T + + F+ L L + + NQ+ + +S L
Sbjct: 414 FKTITEKIGTCSLLEKLDLRGNGLTQLPPN-FRRLQKLKELYVGRNQLGRLEEHISRLKD 472
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L+ L +S N + + +I+ +L VDLS N++ +F
Sbjct: 473 LSVLEISGNGIAHVPV-EIKNCGQLTRVDLSANELGQF 509
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Query: 40 LITLLLVNNNITHIHENAFPPTIR------KLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L L + N I H+ P I+ ++ + N L L L LN+L LN N
Sbjct: 473 LSVLEISGNGIAHV-----PVEIKNCGQLTRVDLSANELGQFPLGLTALAALNYLNLNGN 527
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+ + ++ + +L L + QN+L + + + +L L N I+ + + +
Sbjct: 528 EISEIPEEISEMERLIHLELRQNRLTSFSNYLCRLRKLSYLDLGKNGISGIPPAVSNMLS 587
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L+ +D+N+ + + E +L L+++ L NQI + + L ++ L S+NQ
Sbjct: 588 LRDLILDYNRFSAFPK-ELCSLKGLETLDLSENQIQCIPLKICNLQRIRRLDFSNNQFGS 646
Query: 214 FLLD 217
F ++
Sbjct: 647 FPVE 650
>gi|74183249|dbj|BAE22555.1| unnamed protein product [Mus musculus]
Length = 369
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNMPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLKVVYLHSNNITKVGINDFCPMGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNMP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|298250400|ref|ZP_06974204.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
gi|297548404|gb|EFH82271.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
Length = 384
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R LHV N L+ L +SL L L L L NRL +L +G L L+ + +NQL +L
Sbjct: 77 LRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSL 136
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS- 180
P + +L +L N+++SL + LT+LQ+ + NQ+T + + L NL
Sbjct: 137 PESLWELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLP-ESLGQLTNLTHY 195
Query: 181 ISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEF 214
+ L NN++T+++ SL + LT+LAYL ++ NQLTE
Sbjct: 196 LYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTEL 230
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 3/177 (1%)
Query: 65 LHVGFNNLTSLNNSLRG-LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
L++ N LT+L+ SL LT L +L + +N+L L LG L+ L+ L I NQL LP
Sbjct: 196 LYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPE 255
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
++ + L L+A NNR+ +L L L +L+ + N++ + L NL S+ L
Sbjct: 256 ELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARL-PTYLGELANLTSLDL 314
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+NN + S+ +SL L KL L L N+LT L ++ L+ L +DL + K++ T
Sbjct: 315 RNNLLASLPASLDNLAKLRALDLRANRLTT-LPPGLQRLQHLEKLDLRWLKLSPLPT 370
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
L NRL +L +LG+L +LQ L ++ NQ+ LP + L +L+ + NR++ L L
Sbjct: 36 LTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSSLY 95
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L +L+ + N++T + D L L S+ NQ+TS+ SL L +L L L+ N
Sbjct: 96 HLPRLETLRLYKNRLTNLPAD-IGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAEN 154
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QL+ L + I L +L+ +D +N++
Sbjct: 155 QLSS-LSERIGQLTQLQMLDAGHNQLTTL 182
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L +L L L L L NNRL++L LG L +L+ L + N+L L
Sbjct: 240 LKELRIYNNQLATLPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARL 299
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ + + L SL NN + SL L L KL+ ++ N++T + Q L +L+ +
Sbjct: 300 PTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTTL-PPGLQRLQHLEKL 358
Query: 182 SLQNNQITSMNSSLSGLTK 200
L+ +++ + + L L +
Sbjct: 359 DLRWLKLSPLPTWLDQLEQ 377
>gi|62898165|dbj|BAD97022.1| biglycan preproprotein variant [Homo sapiens]
Length = 368
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|403306817|ref|XP_003943916.1| PREDICTED: biglycan isoform 1 [Saimiri boliviensis boliviensis]
gi|403306819|ref|XP_003943917.1| PREDICTED: biglycan isoform 2 [Saimiri boliviensis boliviensis]
gi|403306821|ref|XP_003943918.1| PREDICTED: biglycan isoform 3 [Saimiri boliviensis boliviensis]
Length = 369
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P R KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRRLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNVNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKRAY-----YNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
>gi|281347635|gb|EFB23219.1| hypothetical protein PANDA_019227 [Ailuropoda melanoleuca]
Length = 368
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 41/254 (16%)
Query: 17 LIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTS 74
L+DL+ G L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L
Sbjct: 95 LLDLQ-NNGISELRRDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE 153
Query: 75 L--------------NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL-- 110
+ +N +R GL +N + + N L++ + G L+L
Sbjct: 154 IPPNLPSSLVELRIHDNRIRKVPKGVFSGLRSMNCIEMGGNPLENSGFEPGAFDGLKLNY 213
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVR 168
L I + +L +P D+ L L+ ++N+I + L+ LLR +KL + NQI M+
Sbjct: 214 LRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIE 270
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKR 224
L L + L NN+++ + S L L L +YL N +T+ ++D G+KR
Sbjct: 271 NGSLSFLPTLRELHLDNNKLSRVPSGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR 330
Query: 225 LRTVDLSYNKINKF 238
YN I+ F
Sbjct: 331 -----AYYNGISLF 339
>gi|111307791|gb|AAI21268.1| LOC734027 protein [Xenopus (Silurana) tropicalis]
Length = 635
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTILPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T + D
Sbjct: 194 NEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L + L +N I + S+ L KL L + NQL +L D I GL + +D S+N+I
Sbjct: 254 SLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLM-YLPDSIGGLTAIEDLDCSFNEI 311
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ + + + G L L L++N ++ L +G L KL L +++NQL LP
Sbjct: 235 LDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + + L + N I +L + L +++ F D N +T + E + + L
Sbjct: 295 IGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQL-PPEIGTWKSATVLFLH 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
+N++ S+ + + KL + LS N+L
Sbjct: 354 SNKLESLPEEMGDMQKLKVINLSDNRL 380
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT ++ + LK+L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLT-YIPGFLGNLKQLTYLDVSKNNI 242
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTE 198
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
IR N LT L + LFL++N+L+SL ++G + KL+++ + N+L L
Sbjct: 324 IRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNL 383
Query: 122 PSDIQLFSQLGSLYANNNRITSL 144
P QL +++ ++N+ L
Sbjct: 384 PFSFTRLQQLTAMWLSDNQSKPL 406
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
I L FN + +L +S+ L + ++N L L ++GT +L + N+LE+
Sbjct: 300 AIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLES 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDNQ 402
>gi|3252981|gb|AAC40175.1| Ras-binding protein SUR-8 [Mus musculus]
Length = 582
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLPKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHN 271
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP++++L ++ N L SL + L +L L L+ N L SL L L KL++L
Sbjct: 115 LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRML 174
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N+L +PS + L +LY NRIT+++ ++ L KL + ++ N+I + E
Sbjct: 175 DLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPA-E 233
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL ++ + +NQ+ + + T++ L L HN L + L D I L L + L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLD-LPDTIGNLSSLNRLGLR 292
Query: 232 YNKINKF 238
YN+++
Sbjct: 293 YNRLSAI 299
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++++L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N+L L +++ L+ LN L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLN 86
D+K P L L + N I + P I +L V N L L + T +
Sbjct: 210 DIKNLPKLSMLSIRENKIKQL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G LS L L + N+L A+P + S L L NN I++L +
Sbjct: 265 NLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPE 324
Query: 146 GLLRGLTKL----------QVF--------------NMDFNQITMVRRDEFQNLHNLDSI 181
LL L KL Q++ NM+ N+I + F L +
Sbjct: 325 SLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKL 384
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL L + LS N + K
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL 440
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|31543701|ref|NP_062632.2| leucine-rich repeat protein SHOC-2 [Mus musculus]
gi|270341361|ref|NP_001161977.1| leucine-rich repeat protein SHOC-2 [Mus musculus]
gi|51338746|sp|O88520.2|SHOC2_MOUSE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|26346735|dbj|BAC37016.1| unnamed protein product [Mus musculus]
gi|29437101|gb|AAH49775.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Mus musculus]
gi|52789459|gb|AAH83060.1| Shoc2 protein [Mus musculus]
gi|74138728|dbj|BAE27179.1| unnamed protein product [Mus musculus]
gi|94962414|gb|ABF48505.1| Shoc2 [Mus musculus]
gi|148669769|gb|EDL01716.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
[Mus musculus]
Length = 582
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLPKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHN 271
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP++++L ++ N L SL + L +L L L+ N L SL L L KL++L
Sbjct: 115 LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRML 174
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N+L +PS + L +LY NRIT+++ ++ L KL + ++ N+I + E
Sbjct: 175 DLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPA-E 233
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL ++ + +NQ+ + + T++ L L HN L + L D I L L + L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLD-LPDTIGNLSSLNRLGLR 292
Query: 232 YNKINKF 238
YN+++
Sbjct: 293 YNRLSAI 299
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++++L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N+L L +++ L+ LN L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 460
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLN 86
D+K P L L + N I + P I +L V N L L + T +
Sbjct: 210 DIKNLPKLSMLSIRENKIKQL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G LS L L + N+L A+P + S L L NN I++L +
Sbjct: 265 NLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPE 324
Query: 146 GLLRGLTKL----------QVF--------------NMDFNQITMVRRDEFQNLHNLDSI 181
LL L KL Q++ NM+ N+I + F L +
Sbjct: 325 SLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKL 384
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL L + LS N + K
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL 440
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|301787429|ref|XP_002929125.1| PREDICTED: biglycan-like [Ailuropoda melanoleuca]
Length = 371
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 41/254 (16%)
Query: 17 LIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTS 74
L+DL+ G L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L
Sbjct: 98 LLDLQ-NNGISELRRDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE 156
Query: 75 L--------------NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL-- 110
+ +N +R GL +N + + N L++ + G L+L
Sbjct: 157 IPPNLPSSLVELRIHDNRIRKVPKGVFSGLRSMNCIEMGGNPLENSGFEPGAFDGLKLNY 216
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVR 168
L I + +L +P D+ L L+ ++N+I + L+ LLR +KL + NQI M+
Sbjct: 217 LRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIE 273
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKR 224
L L + L NN+++ + S L L L +YL N +T+ ++D G+KR
Sbjct: 274 NGSLSFLPTLRELHLDNNKLSRVPSGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR 333
Query: 225 LRTVDLSYNKINKF 238
YN I+ F
Sbjct: 334 -----AYYNGISLF 342
>gi|320170060|gb|EFW46959.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 595
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 25/184 (13%)
Query: 58 FPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQ 115
FP LH+ N +TS++ N+ GLT L L L N++ S+ +L+ L L +
Sbjct: 57 FPAATTSLHLEENQITSISANAFTGLTALTELVLYGNQITSIPATAFASLTALLELDLSS 116
Query: 116 NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
NQ+ +RI S + GL L ++ NQIT + F +L
Sbjct: 117 NQI--------------------SRIDSTE--FTGLAALGELDLSNNQITSISASAFTSL 154
Query: 176 HNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L + L NNQIT+M++ + +GL L +LYLS+NQ+T + GL L T+ L N+
Sbjct: 155 TALYYLHLSNNQITNMSANAFTGLISLNFLYLSNNQITSISANAFTGLISLTTLQLHSNQ 214
Query: 235 INKF 238
I F
Sbjct: 215 ITGF 218
>gi|386781944|ref|NP_001247952.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
gi|355745366|gb|EHH49991.1| hypothetical protein EGM_00744 [Macaca fascicularis]
gi|380814504|gb|AFE79126.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
gi|383410331|gb|AFH28379.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
Length = 602
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS ++ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
+ L L+ + N++T + + F+ L NL+ + L NN++T++ +S S L+ L
Sbjct: 142 IFPEEITNLRNLKCLYLQHNELTCI-SEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNQLKS-LPAEINRMKRLKHLDCNSN 230
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 28/233 (12%)
Query: 31 SDDLKGTPALITLLLVNN------------------NITHIHENAFPPTI------RKLH 66
+DDL+ PAL L + +N N++H FP I + L+
Sbjct: 98 TDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLY 157
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N LT ++ L++L L L+NNRL ++ +LS L L + NQL++LP++I
Sbjct: 158 LQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEIN 217
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+L L N+N + ++ L G+ L++ + N++ + EF + L + + N
Sbjct: 218 RMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL--PEFPSCSLLKELHVGEN 275
Query: 187 QITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QI + + L L + L L N+L + D+I L+ L +DLS N I+
Sbjct: 276 QIEMLEAEHLKHLNSILVLDLRDNKLKS-VPDEITLLQSLERLDLSNNDISSL 327
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIF 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NNR+T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ NQ+ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 204 LSSNQLKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 255
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 451 VSDVNLSF---NKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRF 507
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 508 KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNL 567
Query: 202 AYLYLSHN 209
L L N
Sbjct: 568 RTLLLDGN 575
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +++ FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 451 VSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKML 510
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 511 PEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 566
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 567 LRTLLLDGN 575
>gi|91091582|ref|XP_968188.1| PREDICTED: similar to shoc2 [Tribolium castaneum]
gi|270001034|gb|EEZ97481.1| hypothetical protein TcasGA2_TC011315 [Tribolium castaneum]
Length = 565
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N+T L ++R L L+ L+L N+L L ++G L+ LQ L + +N L +L
Sbjct: 86 LKRLDLSKSNITHLPPTVRDLIHLSELYLYGNKLVYLPLEIGCLTNLQTLALSENSLTSL 145
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + L L +N++ + ++ LT L + FN+I V DE + L +L +
Sbjct: 146 PDSLMSLKSLKVLDLRHNKLNDIPDVVYKLTSLTTLFLRFNRIRYV-DDEIRFLTSLTML 204
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+ N+I + + + L L +SHN L E L ++I L T+DL +N++
Sbjct: 205 SLRENKIKELPAGIGKLVNLVTFDVSHNHL-EHLPEEIGQCINLSTLDLQHNEL 257
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N L L + ++ L L L L+NN L+ + +G L KL++L +E+N+LE LP+
Sbjct: 390 ELNLGTNQLGKLPDDIQALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEENRLEQLPN 449
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +N++TSL + L L ++ N + + +E L NL+S+ +
Sbjct: 450 EIGYLRDLQRLIVQSNQLTSLPRAIGHLANLVFLSVGENNLAYL-PEEIGTLENLESLYV 508
Query: 184 QNN 186
+N
Sbjct: 509 NDN 511
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
+ LT LN + N+L SL +GT + + L + NQL LP DIQ L L +NN
Sbjct: 363 KHLTKLN---MKENQLTSLPLDVGTWTNMVELNLGTNQLGKLPDDIQALQALEVLVLSNN 419
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
+ + + L KL+V +++ N++ + +E L +L + +Q+NQ+TS+ ++ L
Sbjct: 420 LLRRIPPSVGNLRKLRVLDLEENRLEQLP-NEIGYLRDLQRLIVQSNQLTSLPRAIGHLA 478
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
L +L + N L +L ++I L+ L ++
Sbjct: 479 NLVFLSVGENNLA-YLPEEIGTLENLESL 506
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPPTI---RKLHV---GFNNLTSLNNSLRGLTD 84
DD++ AL L+L NN + I PP++ RKL V N L L N + L D
Sbjct: 402 PDDIQALQALEVLVLSNNLLRRI-----PPSVGNLRKLRVLDLEENRLEQLPNEIGYLRD 456
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
L L + +N+L SL +G L+ L L + +N L LP +I L SLY N+N
Sbjct: 457 LQRLIVQSNQLTSLPRAIGHLANLVFLSVGENNLAYLPEEIGTLENLESLYVNDN 511
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 11/220 (5%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTIRK------LHVGFNNLTSLNNSLR 80
L + +K PA I L LV +++H H P I + L + N L + +++
Sbjct: 206 LRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNELLDIPDTIG 265
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY--ANN 138
L L L L NRL + L + +E N + LP + + + N
Sbjct: 266 ELQQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAISQLPEGLLSSLSELTSITLSRN 325
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
N G T + N++ NQI + F +L ++++ NQ+TS+ +
Sbjct: 326 NFAAYPSGGPSQFTNVDSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDVGTW 385
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
T + L L NQL + L DDI+ L+ L + LS N + +
Sbjct: 386 TNMVELNLGTNQLGK-LPDDIQALQALEVLVLSNNLLRRI 424
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 54/208 (25%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L + FN + +++ +R LT L L L N++K L +G L L + N LE
Sbjct: 177 SLTTLFLRFNRIRYVDDEIRFLTSLTMLSLRENKIKELPAGIGKLVNLVTFDVSHNHLEH 236
Query: 121 LPSDI--------------------------QLFSQLGSLYANNNRITSLDGLLRGLTKL 154
LP +I Q ++LG Y NR++ + L +
Sbjct: 237 LPEEIGQCINLSTLDLQHNELLDIPDTIGELQQLTRLGLRY---NRLSFIPSSLSNCRHM 293
Query: 155 QVFNMDFNQITM----------------VRRDEF--------QNLHNLDSISLQNNQITS 190
FN++ N I+ + R+ F N+DSI+L++NQI
Sbjct: 294 DEFNVEGNAISQLPEGLLSSLSELTSITLSRNNFAAYPSGGPSQFTNVDSINLEHNQIDK 353
Query: 191 MNSSLSGLTK-LAYLYLSHNQLTEFLLD 217
+ + K L L + NQLT LD
Sbjct: 354 IPYGIFSRAKHLTKLNMKENQLTSLPLD 381
>gi|327267576|ref|XP_003218575.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Anolis
carolinensis]
Length = 582
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +S++ LT L L+L N+L+SL ++G L L L + +N L +LP + QL +
Sbjct: 115 LPSSVKELTQLTELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSLPDSLDNLKQLRMV 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ LT L + FN+IT V +D +NL L +S++ N+I + +
Sbjct: 175 DLRHNKLREIPPVVYRLTSLTTLYLRFNRITAVEKD-IKNLSLLTMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 234 IGELCNLITLDVAHNQL-EHLPKEIGNCTQITKLDLQHNEL 273
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP + +L ++ FN +T++ ++ L+ L L + N++K L ++G L L L
Sbjct: 184 IPPVVYRLTSLTTLYLRFNRITAVEKDIKNLSLLTMLSIRENKIKQLPAEIGELCNLITL 243
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQLE LP +I +Q+ L +N + L + L+ L+ + +N+++ + R
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSIGNLSSLKSLGLRYNRLSAIPRSL 303
Query: 172 FQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
Q LD ++L+NN I+++ LS L L L L+ N + + + +++
Sbjct: 304 AQ-CSKLDELNLENNIISALPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNM 362
Query: 231 SYNKINK--FGTRNEGK 245
+N+INK FG + K
Sbjct: 363 EHNRINKIPFGIFSRAK 379
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L +L+++ + N+L +P
Sbjct: 127 ELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSLPDSLDNLKQLRMVDLRHNKLREIPP 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ + L +LY NRIT+++ ++ L+ L + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLTSLTTLYLRFNRITAVEKDIKNLSLLTMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L D I L L+++ L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITKLDLQHNELLD-LPDSIGNLSSLKSLGLRYNRLSAI 299
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I KL + N L L +S+ L+ L L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSIGNLSSLKSLGLRYNRLSAI 299
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDI-----------------QLF-----SQLGSLYA 136
L SKL L +E N + ALP + Q + SQ ++YA
Sbjct: 300 PRSLAQCSKLDELNLENNIISALPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYA 359
Query: 137 NN---NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
N NRI + G+ L NM NQ+T + D F ++ ++L NQ+ +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLNKIP 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L L I L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNN-LLRSLPHGIGNLRKLRELDLEENKL 460
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L + + GL L L L+NN L+SL +G L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++++L + L L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLRDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENFLTQL-PEEIGTLENLEE 521
Query: 181 ISLQNN-QITSMNSSLSGLTKLAYLYLSHNQL 211
+ L +N + S+ L+ +KL+ + + + L
Sbjct: 522 LYLNDNPHLNSLPFELALCSKLSIMSIENCPL 553
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L+ L + +N+L SL GT + + L + NQL +P D+ L L +NN + SL
Sbjct: 381 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRSL 440
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ L KL+ +++ N++ + +E L +L + L NNQ++++ + L L +L
Sbjct: 441 PHGIGNLRKLRELDLEENKLESLP-NEIAYLRDLQRLILTNNQLSTLPRGIGHLINLTHL 499
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L N LT+ L ++I L+ L + L+ N
Sbjct: 500 GLGENFLTQ-LPEEIGTLENLEELYLNDN 527
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLIL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN-RITSLDGLLR 149
NN+L +L +G L L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|158257342|dbj|BAF84644.1| unnamed protein product [Homo sapiens]
Length = 368
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|89271872|emb|CAJ81921.1| erbb2 interacting protein [Xenopus (Silurana) tropicalis]
Length = 504
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 35/244 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTILPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T + D
Sbjct: 194 NEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+L + L +N I + S+ L KL L + NQL +L D I GL + +D S+N+I
Sbjct: 254 SLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLM-YLPDSIGGLTAIEDLDCSFNEIE 312
Query: 237 KFGT 240
+
Sbjct: 313 ALPS 316
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ + + + G L L L++N ++ L +G L KL L +++NQL LP
Sbjct: 235 LDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + + L + N I +L + L +++ F D N +T + E + + L
Sbjct: 295 IGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQL-PPEIGTWKSATVLFLH 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
+N++ S+ + + KL + LS N+L
Sbjct: 354 SNKLESLPEEMGDMQKLKVINLSDNRL 380
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT ++ + LK+L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLT-YIPGFLGNLKQLTYLDVSKNNI 242
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTE 198
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
IR N LT L + LFL++N+L+SL ++G + KL+++ + N+L L
Sbjct: 324 IRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNL 383
Query: 122 PSDIQLFSQLGSLYANNNRITSL 144
P QL +++ ++N+ L
Sbjct: 384 PFSFTRLQQLTAMWLSDNQSKPL 406
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
I L FN + +L +S+ L + ++N L L ++GT +L + N+LE+
Sbjct: 300 AIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLES 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDNQ 402
>gi|345802228|ref|XP_547338.3| PREDICTED: leucine-rich repeat-containing protein 40 [Canis lupus
familiaris]
Length = 631
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L L++N+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 111 TDLTKLILSSNQLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQ 170
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + + NN++T++ +S S L+ L
Sbjct: 171 ILPEEITNLRNLKGLYLQHNELTRI-PEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLV 229
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L +S NQL + +I G+KRL+ +D + N
Sbjct: 230 RLNISSNQLKSLPV-EISGMKRLKHLDCNSN 259
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P + L + N LTSL +++R L +L L +++N+L+ L ++ L L+ L ++ N+L
Sbjct: 134 PALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPEEITNLRNLKGLYLQHNELT 193
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P + L L +NNR+T++ L+ L N+ NQ+ + E + L
Sbjct: 194 RIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNISSNQLKSLPV-EISGMKRLK 252
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
+ +N + ++ L+ + L LYL N+L L + + L+ + + N+I G
Sbjct: 253 HLDCNSNLLETVPPELANMESLELLYLRRNKLR--FLPEFPSCRLLKELHVGENQIEILG 310
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L SL + G+ L L N+N L+++ +L + L+LL + +N+L
Sbjct: 227 SLVRLNISSNQLKSLPVEISGMKRLKHLDCNSNLLETVPPELANMESLELLYLRRNKLRF 286
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP + L L+ N+I L L+ L + V ++ N++ V DE L +L+
Sbjct: 287 LP-EFPSCRLLKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSVP-DEITLLQSLE 344
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I+S+ SL L L +L L N L
Sbjct: 345 RLDLSNNDISSLPCSLGKLP-LKFLALEGNPL 375
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 480 VSDVNLSF---NKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRF 536
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 537 KILPDVLYHIPTLETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNL 596
Query: 202 AYLYLSHN 209
L L N
Sbjct: 597 RTLLLDGN 604
>gi|320167357|gb|EFW44256.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 766
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN----NSLRGL 82
++ D G +L +L L +N IT I NAF + LH+ + LT ++ +L L
Sbjct: 98 ISPDAFAGLTSLNSLYLSDNPITSISANAFSDLTELSYLHLSYTQLTDISANAFTTLPAL 157
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRI 141
LN F + + +L+KL+ L + NQ+ ++P S + L SL +NN+I
Sbjct: 158 VSLNLEFTQITTISA--AAFTSLAKLKNLSLNNNQITSVPESAFTGLTALVSLELDNNQI 215
Query: 142 TSLDGL----LRGLTKLQVFNMDF---------------------NQITMVRRDEFQNLH 176
TS+ L L L+ L + N NQIT + + F +L
Sbjct: 216 TSISALAFANLTALSYLGLANNRITGISENTFTGLTALAALYLLDNQITSISANAFTDLT 275
Query: 177 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L ++SL NQITS+++ + +GLT LA L L+ NQ+T + GL L +DL+ N+I
Sbjct: 276 ALTTLSLALNQITSISANAFTGLTTLAGLSLALNQITSISTNAFTGLTTLAGLDLALNQI 335
Query: 236 NKFGT 240
T
Sbjct: 336 TGIST 340
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNR 94
PAL++L L IT I AF ++ L + N +TS+ S GLT L L L+NN+
Sbjct: 155 PALVSLNLEFTQITTISAAAFTSLAKLKNLSLNNNQITSVPESAFTGLTALVSLELDNNQ 214
Query: 95 LKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG-LLRGL 151
+ S+ L+ L L + N++ + + + L +LY +N+ITS+ L
Sbjct: 215 ITSISALAFANLTALSYLGLANNRITGISENTFTGLTALAALYLLDNQITSISANAFTDL 274
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQ 210
T L ++ NQIT + + F L L +SL NQITS+++ + +GLT LA L L+ NQ
Sbjct: 275 TALTTLSLALNQITSISANAFTGLTTLAGLSLALNQITSISTNAFTGLTTLAGLDLALNQ 334
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKI 235
+T + GL L + L N+I
Sbjct: 335 ITGISTNAFTGLTTLAVLRLDNNQI 359
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 115/236 (48%), Gaps = 32/236 (13%)
Query: 35 KGTPALIT-LLLVNNNITHIHENAFPPTI--RKLHVGFNNLTSLN-NSLRGLTDLNWLFL 90
G P +T L L NN I+ I AF +++ + N +T+++ ++ GLT LN L+L
Sbjct: 55 SGIPVGVTHLSLYNNTISSIPAFAFTALAALKEVDLQSNQITAISPDAFAGLTSLNSLYL 114
Query: 91 NNNRLKSLEGQLGT---------LSKLQLLVIEQNQLEALPSDIQL---FSQLGSLYA-- 136
++N + S+ + LS QL I N LP+ + L F+Q+ ++ A
Sbjct: 115 SDNPITSISANAFSDLTELSYLHLSYTQLTDISANAFTTLPALVSLNLEFTQITTISAAA 174
Query: 137 ------------NNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
NNN+ITS+ + GLT L +D NQIT + F NL L + L
Sbjct: 175 FTSLAKLKNLSLNNNQITSVPESAFTGLTALVSLELDNNQITSISALAFANLTALSYLGL 234
Query: 184 QNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NN+IT ++ + +GLT LA LYL NQ+T + L L T+ L+ N+I
Sbjct: 235 ANNRITGISENTFTGLTALAALYLLDNQITSISANAFTDLTALTTLSLALNQITSI 290
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 43 LLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL- 98
L L NN IT + E+AF + L + N +TS++ + LT L++L L NNR+ +
Sbjct: 184 LSLNNNQITSVPESAFTGLTALVSLELDNNQITSISALAFANLTALSYLGLANNRITGIS 243
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN---NRITSLDG-LLRGLTKL 154
E L+ L L + NQ+ ++ ++ F+ L +L + N+ITS+ GLT L
Sbjct: 244 ENTFTGLTALAALYLLDNQITSISANA--FTDLTALTTLSLALNQITSISANAFTGLTTL 301
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTE 213
++ NQIT + + F L L + L NQIT +++ + +GLT LA L L +NQ+
Sbjct: 302 AGLSLALNQITSISTNAFTGLTTLAGLDLALNQITGISTNAFTGLTTLAVLRLDNNQIAS 361
Query: 214 FLLDDIRGLKRL 225
+ GL L
Sbjct: 362 ISANAFTGLTML 373
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 7/197 (3%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFL 90
G AL++L L NN IT I AF + L + N +T ++ N+ GLT L L+L
Sbjct: 199 FTGLTALVSLELDNNQITSISALAFANLTALSYLGLANNRITGISENTFTGLTALAALYL 258
Query: 91 NNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-GL 147
+N++ S+ T L+ L L + NQ+ ++ ++ + L L N+ITS+
Sbjct: 259 LDNQITSISANAFTDLTALTTLSLALNQITSISANAFTGLTTLAGLSLALNQITSISTNA 318
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYL 206
GLT L ++ NQIT + + F L L + L NNQI S+++ + +GLT L YL L
Sbjct: 319 FTGLTTLAGLDLALNQITGISTNAFTGLTTLAVLRLDNNQIASISANAFTGLTMLFYLTL 378
Query: 207 SHNQLTEFLLDDIRGLK 223
+N T +GL+
Sbjct: 379 HNNSFTTLPPGLFKGLR 395
>gi|387965793|gb|AFK13880.1| biglycan [Elephas maximus]
Length = 369
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNRISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL + N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNTNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + +NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGYNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NNR+ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNRISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNTNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L YN+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGYNQI 266
>gi|149066146|gb|EDM16019.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 1638
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|75075434|sp|Q4R3P6.1|LRC40_MACFA RecName: Full=Leucine-rich repeat-containing protein 40
gi|67971856|dbj|BAE02270.1| unnamed protein product [Macaca fascicularis]
Length = 602
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS ++ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
+ L L+ + N++T + + F+ L NL+ + L NN++T++ +S S L+ L
Sbjct: 142 IFPEEITNLRNLKCLYLQHNELTCI-SEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNQLKS-LPAEINRMKRLKHLDCNSN 230
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 28/233 (12%)
Query: 31 SDDLKGTPALITLLLVNN------------------NITHIHENAFPPTI------RKLH 66
+DDL+ PAL L + +N N++H FP I + L+
Sbjct: 98 TDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLY 157
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N LT ++ L++L L L+NNRL ++ +LS L L + NQL++LP++I
Sbjct: 158 LQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEIN 217
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+L L N+N + ++ L G+ L++ + N++ + EF + L + + N
Sbjct: 218 RMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL--PEFPSCSLLKELHVGEN 275
Query: 187 QITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QI + + L L + L L N+L + D+I L+ L +DLS N I+
Sbjct: 276 QIEMLEAEHLKHLNSILVLDLRDNKLKS-VPDEIILLQSLERLDLSNNDISSL 327
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIF 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NNR+T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ NQ+ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 204 LSSNQLKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 255
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 451 VSDVNLSF---NKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRF 507
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 508 KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNL 567
Query: 202 AYLYLSHN 209
L L N
Sbjct: 568 RTLLLDGN 575
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +++ FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 451 VSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKML 510
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 511 PEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 566
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 567 LRTLLLDGN 575
>gi|300798331|ref|NP_001178808.1| protein scribble homolog [Rattus norvegicus]
gi|149066145|gb|EDM16018.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 1663
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|50400983|sp|Q80U72.2|SCRIB_MOUSE RecName: Full=Protein scribble homolog; Short=Scribble; AltName:
Full=Protein LAP4
Length = 1612
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|421090467|ref|ZP_15551259.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000681|gb|EKO51309.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 660
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 98/177 (55%), Gaps = 3/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L + N L SL+ +R L L + N L+++ ++ +L L + E+N++
Sbjct: 442 VRELGIYDNRLVSLD-GIRCFPKLKELLIWGNELETISPEISSLKNLTRISAERNKISNF 500
Query: 122 PSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P+ F + SL N N++T + +GL R L+ + NQ+ + D F+ LD+
Sbjct: 501 PNIEIAFESVTSLSLNKNQLTQIPEGLTRLFPNLKSLGLSDNQLEEIPADLFETFPKLDT 560
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+SL NNQ++ + S++ L L +YL +N+ + + + ++ LK+L+ + LS N+I++
Sbjct: 561 LSLSNNQLSDLPKSIARLESLKNIYLKNNRFVQ-IPEILKELKKLKDISLSGNQISE 616
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 32 DDLKGTPALITLLLVNNNITHIH-ENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D ++ P L LL+ N + I E + + ++ N +++ N + L L
Sbjct: 456 DGIRCFPKLKELLIWGNELETISPEISSLKNLTRISAERNKISNFPNIEIAFESVTSLSL 515
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD--- 145
N N+L + EG L+ L + NQLE +P+D+ + F +L +L +NN+++ L
Sbjct: 516 NKNQLTQIPEGLTRLFPNLKSLGLSDNQLEEIPADLFETFPKLDTLSLSNNQLSDLPKSI 575
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
L L + + N F QI + ++ L L ISL NQI+ + LS +T+L L
Sbjct: 576 ARLESLKNIYLKNNRFVQIPEILKE----LKKLKDISLSGNQISELPEFLSEMTELKELK 631
Query: 206 LSHNQLTE 213
+ +N + +
Sbjct: 632 IGNNPIAQ 639
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 4/202 (1%)
Query: 38 PALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
P+L +L L N++++ ++ + + L + N+LT++ + L L L L +N+L
Sbjct: 347 PSLKSLYLTNSSLSIENKTSIFNSSQLESLCLNANSLTTIPEFVFQLPRLKELLLMDNQL 406
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
L +L L L+ L + N++ + + + FS++ L +NR+ SLDG +R KL+
Sbjct: 407 TELPDRLADLKFLRNLNLSGNKIAQISNLNREFSEVRELGIYDNRLVSLDG-IRCFPKLK 465
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
+ N++ + E +L NL IS + N+I++ + + L L+ NQLT+
Sbjct: 466 ELLIWGNELETI-SPEISSLKNLTRISAERNKISNFPNIEIAFESVTSLSLNKNQLTQIP 524
Query: 216 LDDIRGLKRLRTVDLSYNKINK 237
R L+++ LS N++ +
Sbjct: 525 EGLTRLFPNLKSLGLSDNQLEE 546
>gi|429961970|gb|ELA41514.1| hypothetical protein VICG_01498 [Vittaforma corneae ATCC 50505]
Length = 1394
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 58 FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ 117
FPP+IR L++ N + ++ S+ L + L+LNNN + L + LS L+LL ++ NQ
Sbjct: 84 FPPSIRTLNLNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQ 143
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L LP D+ L L NRI L R KL FN I + +L
Sbjct: 144 LIELP-DLSGLPDLRHLDVAFNRIKELP---RLSPKLATLTARFNSIAKIDSMCSPSLSY 199
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L + L NQI ++ + + L + LYL N + E + I LK L+ + L NKI+K
Sbjct: 200 LKKLDLLGNQIKTIPAEIGNLNSVEMLYLQFNNIVE-VPRSIFSLKNLKQLHLGSNKISK 258
Query: 238 FGTRNEGK 245
R GK
Sbjct: 259 LPARLTGK 266
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L + N L SL ++ L L LFL+ NRLK + ++G L L + QN L+
Sbjct: 853 SLRVLWLKANRLESLPDNFIDLASLEHLFLDFNRLKKIPEKIGLLKNLTKFSLAQNSLKI 912
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P + +L L NN I L + L KL N++ N++ + D +NL L
Sbjct: 913 IPDSVTKLYELEELNMANNAIKRLPYCMGNLRKLMELNLNSNKLDNL-PDSMKNLERLSI 971
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ + NQ ++ + +T L + S N ++ + DI LK+LR ++L N I K
Sbjct: 972 LKIHTNQFRRLSDCVYEMTNLKEIGASFNSISA-IYRDISKLKKLRRLNLYKNNIKKLPC 1030
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N +TSL ++ LT+L+ +N N L L G L L++L ++ N+LE+LP +
Sbjct: 811 LRLNSNQITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDN 870
Query: 125 IQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+ L L+ + NR+ + GLL+ LTK F++ N + ++ D L+ L+ +
Sbjct: 871 FIDLASLEHLFLDFNRLKKIPEKIGLLKNLTK---FSLAQNSLKII-PDSVTKLYELEEL 926
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
++ NN I + + L KL L L+ N+L L D ++ L+RL + + N+ +
Sbjct: 927 NMANNAIKRLPYCMGNLRKLMELNLNSNKLDN-LPDSMKNLERLSILKIHTNQFRRLS 983
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + + +T+L ++ L L L++ NN++ L G G L L LV + N++ L
Sbjct: 739 LKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIPLL 798
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P L L N+N+ITSL LT L ++FN +T + + F NL +L +
Sbjct: 799 PDSFGKLKNLSVLRLNSNQITSLPDNFGKLTNLSECMINFNMLTRL-PESFGNLKSLRVL 857
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ N++ S+ + L L +L+L N+L + + + I LK L L+ N +
Sbjct: 858 WLKANRLESLPDNFIDLASLEHLFLDFNRLKK-IPEKIGLLKNLTKFSLAQNSL 910
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
G NL +L + L +L L + N+++ +L +G L L +L ++ N++ LP
Sbjct: 722 GNKNLETLPENFDNLINLKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRLPGSFGE 781
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
L L A+ N+I L L L V ++ NQIT + D F L NL + N
Sbjct: 782 LESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQITSL-PDNFGKLTNLSECMINFNM 840
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+T + S L L L+L N+L E L D+ L L + L +N++ K +
Sbjct: 841 LTRLPESFGNLKSLRVLWLKANRL-ESLPDNFIDLASLEHLFLDFNRLKKIPEK 893
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 12/210 (5%)
Query: 13 VALNLIDLEPETGSHPLTSDDLK---------GTPALITLLLVNNNITHIHENAFP-PTI 62
+A N + + P++ + + S D+K G +L TL L +N I I +N ++
Sbjct: 564 LASNELSVLPDSLGNVVYSRDIKNNNVIECKSGLVSLRTLNLYHNPIVSIADNVGNLESL 623
Query: 63 RKLH-VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
L+ +G+ NLTSL ++ L +L L + + ++ L G L L+ L I+ +LE
Sbjct: 624 EALNLIGWGNLTSLPDTFVNLANLKKLDICDANIQQLPEDFGKLQSLEQLQIKSVKLEKF 683
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + + L L N ++ +L G L L+ + N+ + F NL NL +
Sbjct: 684 PESCKNMANLKRLEVRNTKVATLFGF-ENLVNLEFLRLSGNKNLETLPENFDNLINLKQL 742
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+QN++IT++ ++ L LA L++ +N++
Sbjct: 743 VIQNSKITALPENIGNLKSLAILWMQNNKI 772
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK----------LQL 110
++ L++ FNN+ + S+ L +L L L +N++ L +L +K L +
Sbjct: 222 SVEMLYLQFNNIVEVPRSIFSLKNLKQLHLGSNKISKLPARLTGKAKKSYLIHFQKNLTV 281
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + N++ +P I L L +N+I L G + + L+V + NQ
Sbjct: 282 LDLSNNKITQIPKYITELVNLKVLNLRSNKIALLRGSFKKMKGLKVLKLSLNQQLGHFPS 341
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ NL +L + +I S+ +S LT L L L+ N++ L I+ L +LR + L
Sbjct: 342 QILNLKSLKILLASFCKIESIPREISELTNLEVLILNGNKIPA-LPKSIKHLAKLRILGL 400
Query: 231 SYNKINKFGTRN 242
+FG N
Sbjct: 401 G-----RFGPEN 407
>gi|410989605|ref|XP_004001049.1| PREDICTED: biglycan [Felis catus]
Length = 369
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPSGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|194755016|ref|XP_001959788.1| GF11863 [Drosophila ananassae]
gi|190621086|gb|EDV36610.1| GF11863 [Drosophila ananassae]
Length = 1187
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 12/216 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP-P-TIRKLHVGFNNLTSLNNS----LRGL 82
++ + L PAL TL L N + I N+FP P ++ L + FN +T+++ + L L
Sbjct: 245 ISREALLALPALRTLDLSRNQLHSIEANSFPIPNSLGHLILNFNEITNIDVAAFVPLNNL 304
Query: 83 TDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
TDL LNNN++ +L G L++L+ L + N LE S + + +L NRI
Sbjct: 305 TDLE---LNNNQIGNLPVGTFQNLTRLKKLSLNFNHLEINWSTFKGLVAVKNLQLKANRI 361
Query: 142 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+L DG+ + ++ ++ NQIT + R E NL L ++L N I+ + T+
Sbjct: 362 RALQDGVFYVMRNIESIDLAQNQITSLSRKELYNLTKLRHLNLSMNAISHIEVDAWEFTQ 421
Query: 201 L-AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L LSHN +TEF + L+RL+T++L++N++
Sbjct: 422 LLELLDLSHNAITEFKPQHLDCLQRLKTLNLAHNRL 457
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 6/209 (2%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G L L+L NN+IT I A P +R L + N L S+ NS L L LN
Sbjct: 228 GLNGLKHLILANNHITSISREALLALPALRTLDLSRNQLHSIEANSFPIPNSLGHLILNF 287
Query: 93 NRLKSLE-GQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDGLLRG 150
N + +++ L+ L L + NQ+ LP Q ++L L N N + +G
Sbjct: 288 NEITNIDVAAFVPLNNLTDLELNNNQIGNLPVGTFQNLTRLKKLSLNFNHLEINWSTFKG 347
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHN 209
L ++ + N+I ++ F + N++SI L NQITS++ L LTKL +L LS N
Sbjct: 348 LVAVKNLQLKANRIRALQDGVFYVMRNIESIDLAQNQITSLSRKELYNLTKLRHLNLSMN 407
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++ +D + L +DLS+N I +F
Sbjct: 408 AISHIEVDAWEFTQLLELLDLSHNAITEF 436
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
LQ+ N N T++ E +NL NL ++L+ N + + SGL L +L L++N +T
Sbjct: 189 LQLANNKLNDTTVL---EIRNLSNLIKVTLKRNLLEVI-PKFSGLNGLKHLILANNHITS 244
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
+ + L LRT+DLS N+++
Sbjct: 245 ISREALLALPALRTLDLSRNQLHSI 269
>gi|38566048|gb|AAH62888.1| Scrib protein [Mus musculus]
Length = 1612
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|8392983|ref|NP_058783.1| biglycan precursor [Rattus norvegicus]
gi|1346706|sp|P47853.1|PGS1_RAT RecName: Full=Biglycan; AltName: Full=Bone/cartilage proteoglycan
I; AltName: Full=PG-S1; Flags: Precursor
gi|600498|gb|AAA58797.1| biglycan [Rattus norvegicus]
gi|47939035|gb|AAH72480.1| Biglycan [Rattus norvegicus]
gi|149029935|gb|EDL85047.1| biglycan, isoform CRA_a [Rattus norvegicus]
gi|149029936|gb|EDL85048.1| biglycan, isoform CRA_a [Rattus norvegicus]
Length = 369
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGINDFCPMGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|193787431|dbj|BAG52637.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 81 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 140
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 141 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 200
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 201 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 257
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + S L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 258 LHLDNNKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 312
Query: 237 KF 238
F
Sbjct: 313 LF 314
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 76 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 134
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 135 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 192
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 193 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 241
>gi|148697569|gb|EDL29516.1| scribbled homolog (Drosophila), isoform CRA_c [Mus musculus]
Length = 1669
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 190 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 242
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 243 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 302
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 303 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 361
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 362 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 404
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 141 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 200
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 201 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 260
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 261 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 318
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 319 IGQLKQLSILKVDQNRL 335
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 328 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 387
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 388 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 444
Query: 184 QNNQITSM 191
NQ M
Sbjct: 445 AENQAQPM 452
>gi|148697571|gb|EDL29518.1| scribbled homolog (Drosophila), isoform CRA_e [Mus musculus]
Length = 1646
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|20373163|ref|NP_598850.1| protein scribble homolog [Mus musculus]
gi|16974785|gb|AAL32469.1|AF441233_1 PDZ-domain protein scribble [Mus musculus]
gi|148697572|gb|EDL29519.1| scribbled homolog (Drosophila), isoform CRA_f [Mus musculus]
Length = 1665
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|344274389|ref|XP_003408999.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Loxodonta africana]
Length = 581
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 109 RSIHI-------LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 161
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 162 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLIMLS 220
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 221 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCIQITNLDLQHNEL 272
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 126 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 185
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 186 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPA-EIGELCNLITLDV 244
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + ++ L L HN+L + L D I L L + L YN+++
Sbjct: 245 AHNQLEHLPKEIGNCIQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 298
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 402 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 461
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 462 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 520
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 521 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 562
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE LP +
Sbjct: 196 LYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 255
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 256 IGNCIQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 314
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ + LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 315 NNNISTLPETLLSSLVKLNSLTLARNCFQLYPMGGPSQFSTIYSLNMEHNRINKIPFGIF 374
Query: 242 NEGK 245
+ K
Sbjct: 375 SRAK 378
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 40 LITLLLVNNNITHIHE---NAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
LITL + +N + H+ + N I L + N L L +++ L+ L+ L L NRL
Sbjct: 239 LITLDVAHNQLEHLPKEIGNCI--QITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLS 296
Query: 97 SL------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQL 131
++ E L +L KL L + +N + P FS +
Sbjct: 297 AIPRSLAKCSALEELNLENNNISTLPETLLSSLVKLNSLTLARNCFQLYPMGGPSQFSTI 356
Query: 132 GSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
SL +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T
Sbjct: 357 YSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTK 415
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ +SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 416 IPEDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 459
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L L + + L L +N L L +G LS L L + N+L A+P
Sbjct: 242 LDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS 301
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTKL----------QVF--------------NM 159
+ S L L NN I++L + LL L KL Q++ NM
Sbjct: 302 LAKCSALEELNLENNNISTLPETLLSSLVKLNSLTLARNCFQLYPMGGPSQFSTIYSLNM 361
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ N+I + F L +++++NQ+TS+ T + L L+ NQLT+ + +D+
Sbjct: 362 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDV 420
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL L + LS N + K
Sbjct: 421 SGLVSLEVLILSNNLLKKL 439
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 418 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 477
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 478 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 537
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 538 LCSKLSIMSIE 548
>gi|28972079|dbj|BAC65493.1| mKIAA0147 protein [Mus musculus]
Length = 1694
Score = 73.2 bits (178), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 190 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 242
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 243 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 302
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 303 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 361
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 362 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 404
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 141 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 200
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 201 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 260
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 261 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 318
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 319 IGQLKQLSILKVDQNRL 335
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 328 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 387
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 388 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 444
Query: 184 QNNQITSM 191
NQ M
Sbjct: 445 AENQAQPM 452
>gi|153876005|ref|ZP_02003544.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067531|gb|EDN66456.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 307
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L + N LT + + L+ L L +NNN+L L ++G LS+L+ L ++NQL L
Sbjct: 40 LESLSLEGNQLTDIPPEIIYLSQLKQLDINNNQLVILPAEIGQLSQLERLNADENQLVML 99
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PSDI ++L ++ ++N++ +L + L L+ ++ +N+ ++ E L L +
Sbjct: 100 PSDIGKLTKLKTVNFSSNQLIALPSTISHLVNLEELDLSYNKFISLQP-EIAQLSQLRKL 158
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
L NQ+T ++S +S +T+L L LS N+LT+ + L+ +DLS IN FG
Sbjct: 159 DLSGNQLTDISSVISQMTQLTKLNLSDNRLTDLPATLSQLAASLKDIDLS---INDFG 213
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 24/132 (18%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS--------------- 106
+RKL + N LT +++ + +T L L L++NRL L L L+
Sbjct: 155 LRKLDLSGNQLTDISSVISQMTQLTKLNLSDNRLTDLPATLSQLAASLKDIDLSINDFGE 214
Query: 107 ---------KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
KL+ L I +N +E LPS I L L NN +T+L + L L+
Sbjct: 215 IPSVIFQLFKLKELCISENHIEDLPSKIGKLCALEWLDVRNNLLTNLPASISQLIHLEWL 274
Query: 158 NMDFNQITMVRR 169
++ N + + R+
Sbjct: 275 LLEGNPLPIPRK 286
>gi|148697567|gb|EDL29514.1| scribbled homolog (Drosophila), isoform CRA_a [Mus musculus]
Length = 1637
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|93279731|pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
gi|93279732|pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
gi|93279733|pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
gi|93279734|pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
gi|93279735|pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
gi|93279736|pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 69 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 128
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 129 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 188
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D L L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 189 KD--LPETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 245
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 246 LHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR-----AYYNGIS 300
Query: 237 KF 238
F
Sbjct: 301 LF 302
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P + L
Sbjct: 64 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPN--L 121
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 122 PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 180
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 181 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 229
>gi|354488869|ref|XP_003506588.1| PREDICTED: biglycan-like [Cricetulus griseus]
gi|344236002|gb|EGV92105.1| Biglycan [Cricetulus griseus]
Length = 369
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGINDFCPMGFGVKRAY-----YNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|254390720|ref|ZP_05005933.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|294812695|ref|ZP_06771338.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
gi|197704420|gb|EDY50232.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|294325294|gb|EFG06937.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
Length = 395
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHIHENAFPPTI-------RKLHVGFNNLTS 74
L + L PA I TL L +N +T I PP++ R L++ N +TS
Sbjct: 161 LAGNRLSSVPAEIGALSRLHTLDLGHNELTDI-----PPSLGDVTGLSRYLYLSDNKITS 215
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
+ +SL L L +L + +NRL +L + G L+ L+ L + N+L LP I +L
Sbjct: 216 VPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIGALRELREA 275
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ NR+T L + GL L+ + N++T + D L L + L+NN++ ++ +
Sbjct: 276 HLMGNRLTGLPEEIGGLADLRELRLMDNRVTAL-PDTIGGLVRLTRLDLRNNELRAVPDA 334
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +L +L L +N+L E L + L RL +DL +N +
Sbjct: 335 IGRLDRLTHLDLRNNRLHE-LPPTLAALPRLEKLDLRWNPL 374
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 26/199 (13%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + N + +++ GLT L L L N L ++ LG L ++++L + N+L ++P+
Sbjct: 112 ELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPA 171
Query: 124 DIQLFSQLGS------------------------LYANNNRITSLDGLLRGLTKLQVFNM 159
+I S+L + LY ++N+ITS+ L L L+ N+
Sbjct: 172 EIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNI 231
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
N++T + + F +L +L + L +N++T + S+ L +L +L N+LT L ++I
Sbjct: 232 TDNRLTAL-PERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTG-LPEEI 289
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL LR + L N++
Sbjct: 290 GGLADLRELRLMDNRVTAL 308
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+ H+ N LT L + GL DL L L +NR+ +L +G L +L L + N+L A+
Sbjct: 272 LREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAV 331
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
P I +L L NNR+ L L L +L+ ++ +N + +
Sbjct: 332 PDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLAL 376
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 30 TSDDLKGTPALITLLLVNNNITHIHENAFPPTIR-----KLHVGFNNLTSLNNSLRGLTD 84
+DD+ G +++L + + E A P R L + FN L L L L
Sbjct: 53 VTDDMTGK--VVSLSAREQGMRSLPE-ALPEIARLEDLAALDLSFNLLDDLPADLGRLHR 109
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L L++N+ + L+ LQ+L + +N L +PS + ++ L NR++S+
Sbjct: 110 LTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSV 169
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS----LQNNQITSMNSSLSGLTK 200
+ L++L ++ N++T D +L ++ +S L +N+ITS+ SL L
Sbjct: 170 PAEIGALSRLHTLDLGHNELT----DIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGH 225
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L YL ++ N+LT L + L LR + L +N++
Sbjct: 226 LRYLNITDNRLTA-LPERFGDLASLRELRLYHNRLTGL 262
>gi|149066147|gb|EDM16020.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_d
[Rattus norvegicus]
Length = 1635
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|260791918|ref|XP_002590974.1| hypothetical protein BRAFLDRAFT_69475 [Branchiostoma floridae]
gi|229276174|gb|EEN46985.1| hypothetical protein BRAFLDRAFT_69475 [Branchiostoma floridae]
Length = 685
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 15/226 (6%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNS--LRGLTDLNWLF 89
+G L TL L +NNI+ I F P ++ LH+ N+LT +NN+ GL+ L L
Sbjct: 118 FEGLAHLQTLHLRSNNISIIQALTFHPLSGLQYLHLDHNSLTEVNNAQFCCGLSQLQELH 177
Query: 90 LNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS-LDGL 147
L N + ++ G G L +LQ L ++ N L + +D + +QL L+ N+N I+S L G
Sbjct: 178 LEYNSIGTVASGTFGRLPQLQYLHMDHNNLVTV-NDFRSLTQLKELHLNHNSISSILPGA 236
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI--------TSMNSSLSGLT 199
+GL LQ ++D N++T+V D H + I + TS+N S L+
Sbjct: 237 FQGLLHLQNLHLDNNRLTVVTTDFSSFPHYWNCIWAITALVPSSLLPCKTSLNCDFSTLS 296
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 245
+L L+L++N ++ + LRT+ L N +N + G+
Sbjct: 297 QLQELHLNNNSISAIQPGAFANMSSLRTIRLENNALNALPGKAHGE 342
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 106 SKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQ 163
+ ++ L N + AL P+D ++ L + NN I ++D G L L N+ NQ
Sbjct: 50 ADIEALYASNNYIAALHPADFSVYGNLDDIELMNNIINTIDSGTFAALASLVSLNLGSNQ 109
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEF-LLDDIRG 221
++ ++ F+ L +L ++ L++N I+ + + + L+ L YL+L HN LTE G
Sbjct: 110 LSQLQYGVFEGLAHLQTLHLRSNNISIIQALTFHPLSGLQYLHLDHNSLTEVNNAQFCCG 169
Query: 222 LKRLRTVDLSYNKINKFGTRNEGK 245
L +L+ + L YN I + G+
Sbjct: 170 LSQLQELHLEYNSIGTVASGTFGR 193
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 12/161 (7%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQL 118
P ++ LH+ NNL ++N+ R LT L L LN+N + S L G L LQ L ++ N+L
Sbjct: 195 PQLQYLHMDHNNLVTVND-FRSLTQLKELHLNHNSISSILPGAFQGLLHLQNLHLDNNRL 253
Query: 119 EALPSDIQLFSQ-LGSLYANNNRI--------TSLDGLLRGLTKLQVFNMDFNQITMVRR 169
+ +D F ++A + TSL+ L++LQ +++ N I+ ++
Sbjct: 254 TVVTTDFSSFPHYWNCIWAITALVPSSLLPCKTSLNCDFSTLSQLQELHLNNNSISAIQP 313
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSG-LTKLAYLYLSHN 209
F N+ +L +I L+NN + ++ G L +A +YL N
Sbjct: 314 GAFANMSSLRTIRLENNALNALPGKAHGELAPIANVYLHGN 354
>gi|197097556|ref|NP_001124652.1| leucine-rich repeat-containing protein 40 [Pongo abelii]
gi|75070992|sp|Q5RFE9.1|LRC40_PONAB RecName: Full=Leucine-rich repeat-containing protein 40
gi|55725286|emb|CAH89508.1| hypothetical protein [Pongo abelii]
Length = 602
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELQNLQKLNVSHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ NL+ + L NN++T++ +S S L+ L
Sbjct: 142 ILPEEITNLRNLKCLYLQHNELTCI-SEGFEQFSNLEDLDLSNNRLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS N+L L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNELKS-LPAEINRMKRLKHLDCNSN 230
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELQNLQKLNVSHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + FS L L +NNR+T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELTCISEGFEQFSNLEDLDLSNNRLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ N++ + E + L + +N + ++ L+G+ L LYL N+L
Sbjct: 204 LSSNELKSLPA-EINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKL 255
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + + L L N+N L+++ +L + L+LL + +N+L LP
Sbjct: 201 RLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP- 259
Query: 124 DIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ S L L+ N+I L+ L+ L + V ++ N++ V DE L +L+ +
Sbjct: 260 EFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLD 318
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NN I+S+ SL L L +L L N L
Sbjct: 319 LSNNDISSLPYSLGNL-HLKFLALEGNPL 346
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 451 VSDVNLSF---NKLSFISLELCVLQKLTFLDLRNNFLNSLPEEVESLVRLQTINLSFNRF 507
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 508 KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNL 567
Query: 202 AYLYLSHN 209
L L N
Sbjct: 568 RTLLLDGN 575
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +++ FN L+ ++ L L L +L L NN L SL ++ +L +LQ + + N+ + L
Sbjct: 451 VSDVNLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEVESLVRLQTINLSFNRFKML 510
Query: 122 PSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
P + L ++ +NN++ S+D ++ LT L + N D QI E N N
Sbjct: 511 PEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCVN 566
Query: 178 LDSISLQNN 186
L ++ L N
Sbjct: 567 LRTLLLDGN 575
>gi|359461194|ref|ZP_09249757.1| Miro domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 448
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I + L++ NL L + L++L L L N+L++L ++G L +LQ L
Sbjct: 121 LPPEIGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRL 180
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
I N+L ALP +I L L ++N++ +L + L LQ +D+NQ+ + E
Sbjct: 181 DIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHRLPV-E 239
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL S+ L N++ + S+ L L L L+ NQLT L +I L RL + L+
Sbjct: 240 IGQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTH-LPPEISQLHRLEVLSLT 298
Query: 232 YNKINKFGTR 241
NK+ +F T
Sbjct: 299 SNKLQRFPTE 308
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 7/155 (4%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I ++L + N L++L + GL +L L L++N+LK+L ++G L LQ L
Sbjct: 167 LPPEIGQLKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKL 226
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
++ NQL LP +I L SL N++ L + L LQV ++FNQ+T + E
Sbjct: 227 AVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHL-PPE 285
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
LH L+ +SL +N++ + + LT L L+L
Sbjct: 286 ISQLHRLEVLSLTSNKLQRFPTEIIHLTNLEVLHL 320
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 43/191 (22%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + +N L L S+ L +L L LN N+L L ++ L +L++L + N+L+ P++
Sbjct: 249 LGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTE 308
Query: 125 IQLFSQLGSL--------------------YANN-NRITSLDGLLRGLTKLQVFNM---- 159
I + L L YA N+++SL + LT+LQ N+
Sbjct: 309 IIHLTNLEVLHLGASPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGSCT 368
Query: 160 ------DFNQIT------------MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
+ Q+ M E L NL + L NQ+ S+ L LT+L
Sbjct: 369 LLNLPPEIGQLVNLQMLGLSNNGLMSVPHEIGRLANLQGLELSYNQLKSLPPELKALTRL 428
Query: 202 AYLYLSHNQLT 212
YL LS+N L
Sbjct: 429 EYLNLSNNPLP 439
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIR---KLHVG------FNNLTSLNNSL 79
LTS+ L+ P I L N+ +H A P ++ + H+ FN ++SL +
Sbjct: 297 LTSNKLQRFPTEIIHL---TNLEVLHLGASPESLAFSVQFHLKEEYATTFNQVSSLPPEI 353
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
LT L L L + L +L ++G L LQ+L + N L ++P +I + L L + N
Sbjct: 354 GQLTQLQDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLMSVPHEIGRLANLQGLELSYN 413
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
++ SL L+ LT+L+ N+ N + + Q
Sbjct: 414 QLKSLPPELKALTRLEYLNLSNNPLPAEVMKQHQ 447
>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
Length = 348
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 31/215 (14%)
Query: 29 LTSDDLKGTPALITLL-------LVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
LTS+ L+ PA I L L +N +T + E ++R+LH+ N LTS+ +
Sbjct: 93 LTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLTSLRQLHLICNQLTSVPAEIG 152
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY-ANNN 139
LT L L L L+SL ++ L+ L++L ++ N L ++P++I + L L+ N
Sbjct: 153 QLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELHLGGNW 212
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------------------EFQNLHN 177
R+TS+ + LT LQV ++ NQ+T + E L +
Sbjct: 213 RLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQLTS 272
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L + L NQ+TS+ S + LT L L+L N+LT
Sbjct: 273 LRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLT 307
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 2/144 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNN-RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
N+LTS+ + LT L L L N RL S+ ++G L+ LQ+L + +NQL + P++I
Sbjct: 188 NHLTSVPAEIGQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQL 247
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
+ L L+ ++N+ TS+ + LT L+ + NQ+T V E L +L + L +N++
Sbjct: 248 ASLTELFLHDNQFTSVPAEIGQLTSLRELRLGGNQLTSVP-SEIGQLTSLKELWLFDNRL 306
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLT 212
TS+ + + LT L LYL N LT
Sbjct: 307 TSVPAEMGQLTSLKKLYLRDNLLT 330
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
GF + +L + L L+ L L +N+L+SL ++G L+ L+ L + NQL ++P++I L
Sbjct: 71 GFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGL 130
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
+ L L+ N++TS+ + LT L+ ++ ++ + + +Q L +L+ + LQNN
Sbjct: 131 LTSLRQLHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQ-LTSLEVLELQNNH 189
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+TS+ + + LT L L+L N + +I L L+ +DLS N++
Sbjct: 190 LTSVPAEIGQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSRNQLT 238
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N LTS + L L LFL++N+ S+ ++G L+ L+ L + NQL +
Sbjct: 226 SLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQLTSLRELRLGGNQLTS 285
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
+PS+I + L L+ +NR+TS+ + LT L+ + N +T V
Sbjct: 286 VPSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLTSV 332
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N TS+ + LT L L L N+L S+ ++G L+ L+ L + N+L ++P+++ +
Sbjct: 258 NQFTSVPAEIGQLTSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLT 317
Query: 130 QLGSLYANNNRITSLDGLLRGL 151
L LY +N +TS+ ++R L
Sbjct: 318 SLKKLYLRDNLLTSVPTVVREL 339
>gi|153871666|ref|ZP_02000779.1| disease resistance protein [Beggiatoa sp. PS]
gi|152071868|gb|EDN69221.1| disease resistance protein [Beggiatoa sp. PS]
Length = 965
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNIT-HIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
TG P DL L L L NN+ T I E ++ L++G N LT GL
Sbjct: 125 TGPIP----DLSALTQLSYLHLYNNDFTGSIPELKMLTQLKNLYLGANQLTGPLPDFTGL 180
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T+L ++ L N L G + L+ L +EQNQL D+ + L L ++N+ T
Sbjct: 181 TNLQYIHLQENELTGEISDFGDNTNLRELRLEQNQLTGTIPDLTHLTNLQRLGLSSNQFT 240
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L GLT + + +NQ++ L NL + L NQ+T S LT L
Sbjct: 241 GEIPDLTGLTNMWYLALSYNQLSGTIPAYISQLTNLKDLYLHENQLTGTIPDFSKLTNLR 300
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LYL NQLT + D+I L LR + L+ N++
Sbjct: 301 NLYLHDNQLTGTIPDEISTLTNLRVLALNSNQL 333
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA- 120
+R+L + N LT L LT+L L L++N+ L L+ + L + NQL
Sbjct: 206 LRELRLEQNQLTGTIPDLTHLTNLQRLGLSSNQFTGEIPDLTGLTNMWYLALSYNQLSGT 265
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P+ I + L LY + N++T LT L+ + NQ+T DE L NL
Sbjct: 266 IPAYISQLTNLKDLYLHENQLTGTIPDFSKLTNLRNLYLHDNQLTGTIPDEISTLTNLRV 325
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
++L +NQ+T LS LT L++L+LS+NQLT
Sbjct: 326 LALNSNQLTGTIPDLSQLTALSHLWLSYNQLT 357
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
+ LTDL + L N L L L++L L + N ++++ +QL +LY
Sbjct: 108 ISALTDLTVVKLYGNALTGPIPDLSALTQLSYLHLYNNDFTGSIPELKMLTQLKNLYLGA 167
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
N++T GLT LQ ++ N++T D F + NL + L+ NQ+T L+ L
Sbjct: 168 NQLTGPLPDFTGLTNLQYIHLQENELTGEISD-FGDNTNLRELRLEQNQLTGTIPDLTHL 226
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
T L L LS NQ T + D+ GL + + LSYN+++
Sbjct: 227 TNLQRLGLSSNQFTGE-IPDLTGLTNMWYLALSYNQLS 263
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT L LT ++ L+L+ N+L L L+ L+ L NQL D+ +
Sbjct: 423 NQLTGPIPDLSKLTRVSELYLHTNQLSGSIPDLSQLANLKYLQFHNNQLSGPIPDLSQLT 482
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY N+++ L LT LQ + N++T D Q L N+ ++ NQ++
Sbjct: 483 NLKLLYLQENQLSGSIPDLSALTNLQKLALHVNKLTGQIPDVSQ-LSNVWYFAVSYNQLS 541
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
L+GLTKL LYL N T + D
Sbjct: 542 GQIPDLTGLTKLQELYLHDNFFTGTIPD 569
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N LT L LT L+ L+L+ N+L TL+ L+ + + N L
Sbjct: 323 LRVLALNSNQLTGTIPDLSQLTALSHLWLSYNQLTGAVPSFTTLTNLKEVYLHGNLLTGT 382
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
D+ + L N N++T + L L K + NQ+T D
Sbjct: 383 IPDLSSLGSVQKLALNGNKLTGMIPDLSALEKAWYIALSGNQLTGPIPDLSKLTRVSELY 442
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ L NL + NNQ++ LS LT L LYL NQL+ + D+
Sbjct: 443 LHTNQLSGSIPDLSQLANLKYLQFHNNQLSGPIPDLSQLTNLKLLYLQENQLSGS-IPDL 501
Query: 220 RGLKRLRTVDLSYNKI 235
L L+ + L NK+
Sbjct: 502 SALTNLQKLALHVNKL 517
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N L+ L L +L +L +NN+L L L+ L+LL +++NQL
Sbjct: 438 VSELYLHTNQLSGSIPDLSQLANLKYLQFHNNQLSGPIPDLSQLTNLKLLYLQENQLSGS 497
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
D+ + L L + N++T + L+ + F + +NQ++ D L L +
Sbjct: 498 IPDLSALTNLQKLALHVNKLTGQIPDVSQLSNVWYFAVSYNQLSGQIPD-LTGLTKLQEL 556
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +N T +S L + LY ++N LT
Sbjct: 557 YLHDNFFTGTIPDVSVLPNVKRLYFTNNLLT 587
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L LT+L L+L N+L L L+ LQ L + N+L D+ S + +
Sbjct: 478 LSQLTNLKLLYLQENQLSGSIPDLSALTNLQKLALHVNKLTGQIPDVSQLSNVWYFAVSY 537
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
N+++ L GLTKLQ + N T D L N+ + NN +T L+ L
Sbjct: 538 NQLSGQIPDLTGLTKLQELYLHDNFFTGTIPD-VSVLPNVKRLYFTNNLLTGSLPELNTL 596
Query: 199 TKLAYLYLSHNQLTEFLLD 217
TKL L + +N L+ + D
Sbjct: 597 TKLVSLRIQNNNLSGAIPD 615
>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 422
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 29 LTSDDLKGTPALITLL-------LVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLR 80
L+S+ LK P I L L NN +T + ++ +R+L + N LT+L +
Sbjct: 70 LSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIG 129
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L +L L L NN+LK+L +G L L+ L ++ NQL+ LP DI L LY + N+
Sbjct: 130 QLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQ 189
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+ +L + L L N+ N +T + +D NL NL + L NN++T++ + L
Sbjct: 190 LKTLPKDIGKLQNLTELNLTNNPLTTLPKD-IGNLKNLGELLLINNELTTLPKEIGKLKN 248
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L YL L L +DI LK LR ++LS N+I
Sbjct: 249 LQVSYLGA--LLTTLPNDIGYLKSLRELNLSGNQI 281
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L++ N L +L + L +L L+L+ N+LK+L +G L L L + N L L
Sbjct: 157 LRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTL 216
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI LG L NN +T+L + L LQV + T+ ++ L +L +
Sbjct: 217 PKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVSYLGALLTTLP--NDIGYLKSLREL 274
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQIT++ + L L LYLS NQL L +I L+ LR +DLS N+I
Sbjct: 275 NLSGNQITTLPKDIGQLQNLQVLYLSENQLA-TLPKEIGQLQNLRELDLSGNQI 327
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N I LH N +L + L +L L+L++N+LK+L ++G L K+
Sbjct: 33 NLTEALQNPTDVRILSLH----NNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKI 88
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L + NQL LP DI +L L NN +T+L + L L+ ++ NQ+ +
Sbjct: 89 ERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLP 148
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+D Q L NL + L NNQ+ ++ + L L LYL NQL + L DI L+ L +
Sbjct: 149 KDIGQ-LQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQL-KTLPKDIGKLQNLTEL 206
Query: 229 DLSYNKI 235
+L+ N +
Sbjct: 207 NLTNNPL 213
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 27 HPLTS--DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNN--LTSLNNSLRGL 82
+PLT+ D+ L LLL+NN +T + + ++ L V + LT+L N + L
Sbjct: 211 NPLTTLPKDIGNLKNLGELLLINNELTTLPKEIG--KLKNLQVSYLGALLTTLPNDIGYL 268
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
L L L+ N++ +L +G L LQ+L + +NQL LP +I L L + N+IT
Sbjct: 269 KSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQIT 328
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
+L + L L+ N+ N +T + +D L +L ++L NQIT++ + L L
Sbjct: 329 TLPKDIGELQSLRELNLSGNLLTTLPKD-IGKLQSLRELNLGGNQITTIPKEIGHLKNLQ 387
Query: 203 YLYL 206
LYL
Sbjct: 388 VLYL 391
>gi|348552790|ref|XP_003462210.1| PREDICTED: biglycan-like [Cavia porcellus]
Length = 368
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKRAY-----YNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|20137008|ref|NP_031568.2| biglycan precursor [Mus musculus]
gi|129948|sp|P28653.1|PGS1_MOUSE RecName: Full=Biglycan; AltName: Full=Bone/cartilage proteoglycan
I; AltName: Full=PG-S1; Flags: Precursor
gi|53667|emb|CAA37875.1| biglycan (PGI) [Mus musculus]
gi|13529440|gb|AAH05452.1| Biglycan [Mus musculus]
gi|18044515|gb|AAH19502.1| Biglycan [Mus musculus]
gi|74217530|dbj|BAE33531.1| unnamed protein product [Mus musculus]
gi|74227876|dbj|BAE37948.1| unnamed protein product [Mus musculus]
gi|148697950|gb|EDL29897.1| biglycan [Mus musculus]
Length = 369
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGINDFCPMGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|83646241|ref|YP_434676.1| hypothetical protein HCH_03505 [Hahella chejuensis KCTC 2396]
gi|83634284|gb|ABC30251.1| Leucine-rich repeat (LRR) protein [Hahella chejuensis KCTC 2396]
Length = 370
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
+LR L L L+L++ L+ L + KL+ L + NQL LP I S L LY +
Sbjct: 30 ALRELKQLPELYLSDRLLEDLSPAISAFQKLERLSLSGNQLRQLPETIGKLSSLNHLYLD 89
Query: 138 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
+N++TSL + L++L+ + N + + R E +L L+ +SL N ++++ + + G
Sbjct: 90 SNKLTSLPSSIGSLSRLKSLTLFDNSLEKLPR-EVGDLAELELLSLGQNALSTLPNEIGG 148
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L+KL+ LYL +N+L L + I + L T++L YNK+ +
Sbjct: 149 LSKLSLLYLHNNRLVA-LPETIGRMHSLSTLELDYNKLEQL 188
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 7/153 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
P TI KL ++ N LTSL +S+ L+ L L L +N L+ L ++G L++L+LL
Sbjct: 73 LPETIGKLSSLNHLYLDSNKLTSLPSSIGSLSRLKSLTLFDNSLEKLPREVGDLAELELL 132
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ QN L LP++I S+L LY +NNR+ +L + + L +D+N++ + +
Sbjct: 133 SLGQNALSTLPNEIGGLSKLSLLYLHNNRLVALPETIGRMHSLSTLELDYNKLEQLPQS- 191
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+L L S+SL NQ S+ L L KLAYL
Sbjct: 192 IGDLSALGSLSLIGNQFRSVPEVLLQLEKLAYL 224
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 48/224 (21%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N L++L N + GL+ L+ L+L+NNRL +L +G + L L ++ N+LE LP
Sbjct: 132 LSLGQNALSTLPNEIGGLSKLSLLYLHNNRLVALPETIGRMHSLSTLELDYNKLEQLPQS 191
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI-------------------- 164
I S LGSL N+ S+ +L L KL ++D + I
Sbjct: 192 IGDLSALGSLSLIGNQFRSVPEVLLQLEKLAYLSIDISSIATSTDLPRNVSHLCLSLDTD 251
Query: 165 ----TMVRRDEF-----------------------QNLHNLDSISLQNNQITSMNSSLSG 197
++R ++F +NL NL + L N++ + +
Sbjct: 252 NIDQALMRLEKFAGVRSLSLKTHNRETLPPTIGLLKNLPNLVGLDLSFNKLKKLPPEIGE 311
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+T+L +L+L+ NQ TE +I LK+L+ +++ N I + R
Sbjct: 312 ITQLTHLHLNDNQFTEA-PSEILNLKQLKELNIYRNNIPEEQQR 354
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
I +Q LP ++ QL LY ++ + L + KL+ ++ NQ+ + +
Sbjct: 19 IPDSQPPRLPYALRELKQLPELYLSDRLLEDLSPAISAFQKLERLSLSGNQLRQL-PETI 77
Query: 173 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
L +L+ + L +N++TS+ SS+ L++L L L N L E L ++ L L + L
Sbjct: 78 GKLSSLNHLYLDSNKLTSLPSSIGSLSRLKSLTLFDNSL-EKLPREVGDLAELELLSLGQ 136
Query: 233 NKIN 236
N ++
Sbjct: 137 NALS 140
>gi|148669768|gb|EDL01715.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
[Mus musculus]
Length = 524
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLPKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHN 271
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP++++L ++ N L SL + L +L L L+ N L SL L L KL++L
Sbjct: 115 LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRML 174
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N+L +PS + L +LY NRIT+++ ++ L KL + ++ N+I + E
Sbjct: 175 DLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQL-PAE 233
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL ++ + +NQ+ + + T++ L L HN L + L D I L L + L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLD-LPDTIGNLSSLNRLGLR 292
Query: 232 YNKINKF 238
YN+++
Sbjct: 293 YNRLSAI 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+LP+
Sbjct: 406 ELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPN 465
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+I L L NN++++L + LT L + N +T + + +NL
Sbjct: 466 EIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGRNLR 518
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLN 86
D+K P L L + N I + P I +L V N L L + T +
Sbjct: 210 DIKNLPKLSMLSIRENKIKQL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G LS L L + N+L A+P + S L L NN I++L +
Sbjct: 265 NLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPE 324
Query: 146 GLLRGLTKL----------QVF--------------NMDFNQITMVRRDEFQNLHNLDSI 181
LL L KL Q++ NM+ N+I + F L +
Sbjct: 325 SLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKL 384
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL L + LS N + K
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL 440
>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 416
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 99/199 (49%), Gaps = 23/199 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N LT+L +L LTDL L L++NRL +L LG L+ L +L + NQL A
Sbjct: 216 SLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTA 275
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR----------- 169
LP + + L L ++NR+T+L +L LT L F N +T V
Sbjct: 276 LPETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLL 335
Query: 170 -----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
D NL +L +SL NQ+T++ +L LT L L L +N+LT L +
Sbjct: 336 GLSGNRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNRLTA-LPES 394
Query: 219 IRGLKRLRTVDLSYNKINK 237
+ L L ++LS N I+
Sbjct: 395 LGDLPDLTWINLSGNPIDA 413
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT+L L LTDL L L++NRL +L LG L+ L LL + N+L LP + + L
Sbjct: 158 LTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLASL 217
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L N++T+L L LT L ++ N++T + D NL +L +SL NQ+T++
Sbjct: 218 TKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTL-PDTLGNLASLTMLSLYGNQLTAL 276
Query: 192 NSSLSGLTKLAYLYLSHNQLTEF 214
+L LT L L LS N+LT
Sbjct: 277 PETLGNLTNLTELDLSSNRLTTL 299
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + NNL+ + +SLR L L L L N L+++ LG L L++L + +N L
Sbjct: 45 LARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDLVTLEVLDLRENGLSQA 104
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + L L + N +++L L+ LT L N+ + + M+ + F L
Sbjct: 105 PDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNL--SSLGMLAPEFFPTLG----- 157
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+T++ L LT L L LS N+LT
Sbjct: 158 ------LTTLPEWLGNLTDLTELDLSSNRLTAL 184
>gi|410940039|ref|ZP_11371859.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410784848|gb|EKR73819.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 473
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L + NLT+L + L L +L L+NNRL +L ++G L KL+ L +E+NQL L
Sbjct: 75 LESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKELSLEKNQLTTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR------------ 169
P +I L + +NNR+ +L + L KL+ ++ NQ+T + +
Sbjct: 135 PKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIGKLKKLKNLY 194
Query: 170 ----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+E L L+ +SL NNQ+ ++ + L KL L+LS NQ L +I
Sbjct: 195 ICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFV-ILPKEI 253
Query: 220 RGLKRLRTVDLSYNKI 235
L+ L + L N++
Sbjct: 254 GQLQELEHLSLDDNQL 269
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT L + L +L L L+NN+L +L ++G L KL+LL + NQ L
Sbjct: 190 LKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVIL 249
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L ++N++ +L + L KL+ ++ N+ + + L L ++
Sbjct: 250 PKEIGQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPK-AIGRLQKLKAL 308
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L +NQ+ ++ L KL YL+L+HN+ T F +++ L+ L+ + L+ N+
Sbjct: 309 YLSDNQLAILSEQSLHLQKLEYLHLNHNRFTTF-PKEVQQLQNLKDLHLNGNQ 360
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P + L + + LT+L + L +L L L+ L +L ++G L KL+ L + N+L
Sbjct: 49 PLDVLALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRL 108
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I +L L N++T+L + L LQ N+ N++ + R E L L
Sbjct: 109 VTLPQEIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPR-EIGKLQKL 167
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L+ NQ+T++ + L KL LY+ NQLT L +++ L+ L + L N++
Sbjct: 168 KELYLEKNQLTTLPKEIGKLKKLKNLYICDNQLT-ILPEEVIQLQELEELSLDNNQL 223
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L L L+L++N+L L Q L KL+ L + N+ P ++Q L L+ N N+
Sbjct: 302 LQKLKALYLSDNQLAILSEQSLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQF 361
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T L + L KL+ +D NQ+T++ + L L +SL NNQ+T + + L KL
Sbjct: 362 TILPQGIGQLQKLEYLFLDNNQLTILPQG-IGKLQKLKELSLDNNQLTILPKGIGKLQKL 420
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
YL LS+NQLT L +IR L+ L + L
Sbjct: 421 EYLNLSNNQLTT-LPKEIRKLQNLHFLGLE 449
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L L L L+NNR +G L KL+ L + NQL L
Sbjct: 267 NQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALYLSDNQLAILSEQSLHLQ 326
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L+ N+NR T+ ++ L L+ +++ NQ T++ + Q L L+ + L NNQ+T
Sbjct: 327 KLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGIGQ-LQKLEYLFLDNNQLT 385
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L KL L L +NQLT L I L++L ++LS N++
Sbjct: 386 ILPQGIGKLQKLKELSLDNNQLT-ILPKGIGKLQKLEYLNLSNNQL 430
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ N T+ ++ L +L L LN N+ L +G L KL+ L ++ NQL LP
Sbjct: 331 LHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGIGQLQKLEYLFLDNNQLTILPQG 390
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLH 176
I +L L +NN++T L + L KL+ N+ NQ+T + ++ + QNLH
Sbjct: 391 IGKLQKLKELSLDNNQLTILPKGIGKLQKLEYLNLSNNQLTTLPKEIRKLQNLH 444
>gi|348962|gb|AAA64360.1| biglycan [Mus musculus]
Length = 369
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGINDFCPMGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|451969425|ref|ZP_21922654.1| hypothetical protein HMPREF9728_01852, partial [Treponema denticola
US-Trep]
gi|451701814|gb|EMD56273.1| hypothetical protein HMPREF9728_01852, partial [Treponema denticola
US-Trep]
Length = 428
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 14/202 (6%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
G++ LT +++G AL L N +T ++ + +L N LT+LN ++GLT
Sbjct: 77 CGTNQLTELNVQGLTALKELYCSENQLTELNVQGLT-VLERLFCWGNQLTALN--VQGLT 133
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L L N+L L Q L+ LQ L NQL L ++Q + L L + N++T+
Sbjct: 134 ALKELDCGGNQLTELNVQ--GLNNLQKLNCNSNQLTEL--NVQGLTALKELDCSENQLTA 189
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L+ ++GLT LQ + NQ+T + Q L L +S +N +T++N + GLT L +
Sbjct: 190 LN--VQGLTALQELSCSENQLTELN---VQGLTALQGLSCADNNLTALN--VQGLTALKW 242
Query: 204 LYLSHNQLTEFLLDDIRGLKRL 225
LY NQLTE + + LK+L
Sbjct: 243 LYCGGNQLTELNVQGLTALKKL 264
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 17/212 (8%)
Query: 27 HPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLN 86
+ LT +++G L L N +T ++ +++L G N LT LN ++GL +L
Sbjct: 101 NQLTELNVQGLTVLERLFCWGNQLTALNVQGLTA-LKELDCGGNQLTELN--VQGLNNLQ 157
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L N+N+L L Q L+ L+ L +NQL AL ++Q + L L + N++T L+
Sbjct: 158 KLNCNSNQLTELNVQ--GLTALKELDCSENQLTAL--NVQGLTALQELSCSENQLTELN- 212
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
++GLT LQ + N +T + Q L L + NQ+T +N + GLT L LY
Sbjct: 213 -VQGLTALQGLSCADNNLTALN---VQGLTALKWLYCGGNQLTELN--VQGLTALKKLYC 266
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQLTE +++GL L+ ++ + N++ +
Sbjct: 267 GRNQLTEL---NVQGLTALQELNCAANQLTEL 295
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 38/216 (17%)
Query: 21 EPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLR 80
E + + LT+ +++G AL L N +T ++ ++ L NNLT+LN ++
Sbjct: 179 ELDCSENQLTALNVQGLTALQELSCSENQLTELNVQGLTA-LQGLSCADNNLTALN--VQ 235
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
GLT L WL+ N+L L ++Q + L LY N+
Sbjct: 236 GLTALKWLYCGGNQLTEL-------------------------NVQGLTALKKLYCGRNQ 270
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+T L+ ++GLT LQ N NQ+T + L L+ S NQ+T ++ + G T
Sbjct: 271 LTELN--VQGLTALQELNCAANQLTELNVQGCTALQGLECWS---NQLTELD--VQGCTA 323
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L ++ N+LT +++G LRT++ N++N
Sbjct: 324 LQGVHCYGNRLTAI---NVQGCTALRTLNCWSNQLN 356
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 17/213 (7%)
Query: 26 SHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDL 85
+ LT+ +++G AL L N +T ++ ++KL+ N LT LN ++GLT L
Sbjct: 121 GNQLTALNVQGLTALKELDCGGNQLTELNVQGLN-NLQKLNCNSNQLTELN--VQGLTAL 177
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
L + N+L +L Q L+ LQ L +NQL L ++Q + L L +N +T+L+
Sbjct: 178 KELDCSENQLTALNVQ--GLTALQELSCSENQLTEL--NVQGLTALQGLSCADNNLTALN 233
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
++GLT L+ NQ+T + Q L L + NQ+T +N + GLT L L
Sbjct: 234 --VQGLTALKWLYCGGNQLTELN---VQGLTALKKLYCGRNQLTELN--VQGLTALQELN 286
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ NQLTE +++G L+ ++ N++ +
Sbjct: 287 CAANQLTEL---NVQGCTALQGLECWSNQLTEL 316
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
++GLT L L N+L +L Q L+ L+ L +NQL L ++Q + L LY N+
Sbjct: 3 VQGLTALKTLSCWGNQLTALNVQ--GLTALEWLSCSKNQLTEL--NVQGLTALQELYCNS 58
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
N++T L+ ++GLT L+ NQ+T + Q L L + NQ+T +N + GL
Sbjct: 59 NQLTELN--VQGLTALKKLYCGTNQLTELN---VQGLTALKELYCSENQLTELN--VQGL 111
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
T L L+ NQLT +++GL L+ +D N++ +
Sbjct: 112 TVLERLFCWGNQLTAL---NVQGLTALKELDCGGNQLTEL 148
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
++Q + L +L N++T+L+ ++GLT L+ + NQ+T + Q L L +
Sbjct: 2 NVQGLTALKTLSCWGNQLTALN--VQGLTALEWLSCSKNQLTELN---VQGLTALQELYC 56
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+T +N + GLT L LY NQLTE +++GL L+ + S N++ +
Sbjct: 57 NSNQLTELN--VQGLTALKKLYCGTNQLTEL---NVQGLTALKELYCSENQLTEL 106
>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
Length = 493
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 99/175 (56%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R+L + FN +++L + LT + L LNNNRL S+ +GT++ LQ L + +N L+
Sbjct: 135 ALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKG 194
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+++ +L +L + N++ +L + L +L+ + N+I + +L +L++
Sbjct: 195 LPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPA-SIGSLTSLNT 253
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N + + + + LT L +L LS N +T L +I GL LR ++L+ N +
Sbjct: 254 LILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPL-EIGGLSALRALNLAKNSL 307
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R L++ N+L SL S+ L L L L+ N L++L +G LS L L ++ N L +
Sbjct: 296 ALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLRLDHNNLTS 355
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP ++ + S L L + N++ +L + LT+LQV N+D N+++++ E + L
Sbjct: 356 LPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTELQVLNLDGNRLSLL-PPEVAGMTALRE 414
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ + +N+++ + ++ LT L L LS+N+LT
Sbjct: 415 LWVHDNKLSVVPEGIADLTNLNVLTLSNNELT 446
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N L +L S+ L+ L L L++N L SL ++G +S L L+++ NQL L
Sbjct: 320 LQVLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTL 379
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I ++L L + NR++ L + G+T L+ + N++++V + +L NL+ +
Sbjct: 380 PLSIGRLTELQVLNLDGNRLSLLPPEVAGMTALRELWVHDNKLSVVP-EGIADLTNLNVL 438
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+L NN++T + ++++ L L L++ N L
Sbjct: 439 TLSNNELTVLPANMTRLVSLNELWIKDNNL 468
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L +G N + +L S+ LT LN L L +N L + ++G L+ L L + N + +L
Sbjct: 228 LRELQLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSL 287
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I S L +L N + SL + L LQV ++ N++ + + +L L +
Sbjct: 288 PLEIGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEAL-PESIGDLSALTDL 346
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +N +TS+ + ++ L L L NQL L I L L+ ++L N+++
Sbjct: 347 RLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPL-SIGRLTELQVLNLDGNRLSLLPPE 405
Query: 242 NEG 244
G
Sbjct: 406 VAG 408
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 2/179 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P +R L + N L SL ++ L ++ L N N+L ++ +G + L+ L + N +
Sbjct: 88 PNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQLTTVPTTIGECTALRQLDLSFNAIS 147
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
ALP +I +++ L NNNR+ S+ + +T LQ N+ N + + E N+ L
Sbjct: 148 ALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPT-ELGNIQKLK 206
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++ + NQ+ ++ +++ L +L L L N++ E L I L L T+ L+ N + +
Sbjct: 207 TLVVDVNQLRTLPATIGALGQLRELQLGDNRI-ENLPASIGSLTSLNTLILTDNNLPEI 264
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 45 LVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
+ +N I H+ + ++ L V N ++ L S+ L ++ L L+ N+L SL Q G
Sbjct: 3 IADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFG 62
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMD 160
++ L L I N L+ LP+ I L L N+N + SL G LR +++L+ +
Sbjct: 63 DMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKC---N 119
Query: 161 FNQITMVRR--DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
NQ+T V E L LD L N I+++ + LTK+ L L++N+L
Sbjct: 120 ANQLTTVPTTIGECTALRQLD---LSFNAISALPLEIGRLTKMKQLLLNNNRL 169
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
+ + N + L S+ L+ L L++++N++ L +G L+ +Q L ++ NQL +LP+
Sbjct: 1 MSIADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQ 60
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI-TMVRRDEFQNLHNLDSISL 183
+ L +L ++N + L + L L++ +++ N + ++ + F L + +
Sbjct: 61 FGDMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRL--MSELKC 118
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQ+T++ +++ T L L LS N ++ L +I L +++ + L+ N+++
Sbjct: 119 NANQLTTVPTTIGECTALRQLDLSFNAISALPL-EIGRLTKMKQLLLNNNRLDSI 172
>gi|395502117|ref|XP_003755432.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sarcophilus
harrisii]
Length = 582
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L
Sbjct: 115 LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRML 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L L + FN+IT V +D +NL L +S++ N+I + +
Sbjct: 175 DLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLIMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 234 IGELCNLITLDVAHNQL-EHLPKEIGTCTQITNLDLQHNEL 273
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQL-PAEIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L + I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGTCTQITNLDLQHNELLD-LPETIGNLSSLNRLGLRYNRLSAI 299
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGTCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ LS L L L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPEGLLSSLVNLNSLTLARNCFQSYPMGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N +T ++ + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQITKISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++ +L + LT L + N + + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGLGENLLAHL-PEEIGTLENLEE 521
Query: 181 ISLQNN 186
+ L +N
Sbjct: 522 LYLNDN 527
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L ++ L+ LN L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGTCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAI 299
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
EG L +L L L + +N ++ P FS + S
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCFQSYPMGGPSQFSTIYS 359
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D + ++ ++L NQIT ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLD-YGTWTSMVELNLATNQITKIS 418
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L L + L++LR +DL NK+
Sbjct: 419 EDVSGLVSLEVLILSNNVLKR-LPHGLGNLRKLRELDLEENKL 460
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 31 SDDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
S+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L
Sbjct: 418 SEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-- 147
L NN+L +L +G L+ L L + +N L LP +I L LY N+N +L GL
Sbjct: 478 LTNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDN--PNLHGLPF 535
Query: 148 -LRGLTKLQVFNMD 160
L +KL + +++
Sbjct: 536 ELALCSKLSIMSIE 549
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L+ L + +N+L +L GT + + L + NQ+ + D+ L L +NN + L
Sbjct: 381 LSKLNMKDNQLTALPLDYGTWTSMVELNLATNQITKISEDVSGLVSLEVLILSNNVLKRL 440
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
L L KL+ +++ N++ + +E L +L + L NNQ+ ++ + LT L +L
Sbjct: 441 PHGLGNLRKLRELDLEENKLESL-PNEIAYLKDLQKLVLTNNQLNNLPRGIGHLTNLTHL 499
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L N L L ++I L+ L + L+ N
Sbjct: 500 GLGENLLA-HLPEEIGTLENLEELYLNDN 527
>gi|418670643|ref|ZP_13232008.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410753625|gb|EKR15289.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 264
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT+L + L +L L L NRL L ++G L LQ L + NQL+ L
Sbjct: 73 LQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTILPQEIGQLKNLQTLDLSSNQLKTL 132
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L +L+ NN++T+L + + LQ + +NQ+T + + E L NL +
Sbjct: 133 SKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLGYNQLTALPK-EIGQLKNLQEL 191
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NNQ+T++ + L L L L +NQL + L +I LK L+T+ L+ N++
Sbjct: 192 NLWNNQLTTLPIEIGQLQSLKSLDLGNNQL-KILPKEIGQLKNLQTLYLNNNQL 244
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+G++ LT+L ++ L +L L L N+L +L ++ L LQ L + N+L L
Sbjct: 50 LQTLHLGYSQLTTLPKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTIL 109
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L ++N++ +L + L LQ ++ NQ+T + + E + + NL S+
Sbjct: 110 PQEIGQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGNNQLTTLPK-EIEQMQNLQSL 168
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L +NQLT + +I L+ L+++DL N++
Sbjct: 169 GLGYNQLTALPKEIGQLKNLQELNLWNNQLTTLPI-EIGQLQSLKSLDLGNNQL 221
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N + ++ + L +L L L++N+LK+L ++ L LQ L + +QL L
Sbjct: 4 LQTLGLYYNQIKTIPKEIGQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGYSQLTTL 63
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +L N++T+L + L LQ + +N++T++ + E L NL ++
Sbjct: 64 PKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTILPQ-EIGQLKNLQTL 122
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQ+ +++ + L L L+L +NQLT L +I ++ L+++ L YN++
Sbjct: 123 DLSSNQLKTLSKEIVQLKNLQTLHLGNNQLT-TLPKEIEQMQNLQSLGLGYNQL 175
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+G N LT+L + + +L L L N+L +L ++G L LQ L + NQL L
Sbjct: 142 LQTLHLGNNQLTTLPKEIEQMQNLQSLGLGYNQLTALPKEIGQLKNLQELNLWNNQLTTL 201
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L SL NN++ L + L LQ ++ NQ+ + ++ + L
Sbjct: 202 PIEIGQLQSLKSLDLGNNQLKILPKEIGQLKNLQTLYLNNNQLAIEEKERIRKL 255
>gi|301609363|ref|XP_002934234.1| PREDICTED: protein LAP2 [Xenopus (Silurana) tropicalis]
Length = 1359
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 58 FPPTIRKLHV------GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I+ V N ++ L + L +L L+LN+ L L G L+KLQ+L
Sbjct: 107 FPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQIL 166
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR--- 168
+ +NQL+ LP + +QL L +N T + +L L+ L+ F MD N++T +
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFL 226
Query: 169 -------------------RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
D +L + L +N I + S+ L KL L + N
Sbjct: 227 GNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDEN 286
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKI 235
QL +L D I GL + +D S+N+I
Sbjct: 287 QLM-YLPDSIGGLTAIEDLDCSFNEI 311
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ + + + G L L L++N ++ L +G L KL L +++NQL LP
Sbjct: 235 LDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + + L + N I +L + L +++ F D N +T + E + + L
Sbjct: 295 IGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQL-PPEIGTWKSATVLFLH 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
+N++ S+ + + KL + LS N+L
Sbjct: 354 SNKLESLPEEMGDMQKLKVINLSDNRL 380
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPK-TMNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT ++ + LK+L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLT-YIPGFLGNLKQLTYLDVSKNNI 242
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
IR N LT L + LFL++N+L+SL ++G + KL+++ + N+L L
Sbjct: 324 IRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNL 383
Query: 122 PSDIQLFSQLGSLYANNNRITSL 144
P QL +++ ++N+ L
Sbjct: 384 PFSFTRLQQLTAMWLSDNQSKPL 406
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTEV 199
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
I L FN + +L +S+ L + ++N L L ++GT +L + N+LE+
Sbjct: 300 AIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLES 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDNQ 402
>gi|345322696|ref|XP_001505628.2| PREDICTED: leucine-rich repeat-containing protein 40
[Ornithorhynchus anatinus]
Length = 612
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L L+NN+L++L L L L +L + NQL +LP + L L ++N++
Sbjct: 90 TDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLASLPCAVGELENLQRLNVSHNKLK 149
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L ++ L L+ + N++T + + F L NL+ + + NN ++S+ +S S LT L
Sbjct: 150 ILPEEIKNLRNLKSLFLQNNELTCI-PEGFGQLLNLEELDISNNHLSSVPASFSTLTNLV 208
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L L+ NQL L +I G+KRL+ +D + N
Sbjct: 209 RLNLARNQLKS-LPTEISGMKRLKQLDCTCN 238
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTD 84
SDDL+ PAL L + +N + + P + ++L+V N L L ++ L +
Sbjct: 106 SDDLRLLPALTVLDVHDNQLA-----SLPCAVGELENLQRLNVSHNKLKILPEEIKNLRN 160
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L LFL NN L + G L L+ L I N L ++P+ + L L N++ SL
Sbjct: 161 LKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVPASFSTLTNLVRLNLARNQLKSL 220
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ G+ +L+ + N + + E ++ +L+ + L+ N++ S+ L L
Sbjct: 221 PTEISGMKRLKQLDCTCNLLETIP-SELASMESLELLYLRRNKLRSI-PEFPFCRSLKEL 278
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ NQ+ + ++ L + +DL NK+
Sbjct: 279 HVGENQIEVIGAEHLKHLSSINVLDLRDNKL 309
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + G+ L L N L+++ +L ++ L+LL + +N+L ++P
Sbjct: 209 RLNLARNQLKSLPTEISGMKRLKQLDCTCNLLETIPSELASMESLELLYLRRNKLRSIP- 267
Query: 124 DIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ L L+ N+I + L+ L+ + V ++ N++ + DE L L+ +
Sbjct: 268 EFPFCRSLKELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSIP-DEITLLQALERLD 326
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NN I+S+ +L L L +L L N +
Sbjct: 327 LTNNDISSLPYALGNLPHLKFLALEGNPM 355
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 4/202 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L+L NN + + ++ P + L V N L SL ++ L +L L +++N+LK L
Sbjct: 92 LTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLASLPCAVGELENLQRLNVSHNKLKIL 151
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L +P L L +NN ++S+ LT L N
Sbjct: 152 PEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVPASFSTLTNLVRLN 211
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+ + E + L + N + ++ S L+ + L LYL N+L + +
Sbjct: 212 LARNQLKSL-PTEISGMKRLKQLDCTCNLLETIPSELASMESLELLYLRRNKLRS--IPE 268
Query: 219 IRGLKRLRTVDLSYNKINKFGT 240
+ L+ + + N+I G
Sbjct: 269 FPFCRSLKELHVGENQIEVIGA 290
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLN 91
+L +L L L N + I E F ++++LHVG N + + L+ L+ +N L L
Sbjct: 246 ELASMESLELLYLRRNKLRSIPEFPFCRSLKELHVGENQIEVIGAEHLKHLSSINVLDLR 305
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
+N+LKS +P +I L L L NN I+SL L L
Sbjct: 306 DNKLKS-----------------------IPDEITLLQALERLDLTNNDISSLPYALGNL 342
Query: 152 TKLQVFNMDFNQITMVRRD 170
L+ ++ N + +RRD
Sbjct: 343 PHLKFLALEGNPMRTIRRD 361
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 17/157 (10%)
Query: 67 VGFNNLTSLNNSLRGL--------------TDLNWLFLNNNRLKSLEGQLGTLSKLQLLV 112
VG N +TS+N S L +D+N F N+L + ++ L KL L
Sbjct: 432 VGRNTVTSINFSKNQLNEVPKRIVELKETVSDVNLSF---NKLSLISLEISVLQKLTHLD 488
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
I N L ALP ++ +L ++ + NR + +L + L+ NQ+ V
Sbjct: 489 IRNNLLTALPDEMSALKKLQTINLSFNRFKTFPDVLYCIPTLETILFSNNQVGSVDALRM 548
Query: 173 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+ + L ++ LQNN + + L L L L N
Sbjct: 549 KKMDKLATLDLQNNDLLQVPPELGNCMTLRTLLLEGN 585
>gi|395860552|ref|XP_003802575.1| PREDICTED: biglycan [Otolemur garnettii]
Length = 369
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLLEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N++T L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDITELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLLELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N IT +R+D+F+ L +L ++ L NN+I+ ++ + S L KL LY+S N L E +
Sbjct: 101 NDITELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPS 160
Query: 221 GLKRLRTVDLSYNKINK 237
L LR D K+ K
Sbjct: 161 SLLELRIHDNRIRKVPK 177
>gi|148225142|ref|NP_001080350.1| leucine-rich repeat protein SHOC-2 [Xenopus laevis]
gi|82242622|sp|Q8AVI4.1|SHOC2_XENLA RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
homolog
gi|27503220|gb|AAH42263.1| Shoc2-prov protein [Xenopus laevis]
Length = 577
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP + +L + FN +T++ L+ L L L + N++K L ++G L L L
Sbjct: 179 IPPVVYRLSSLTTLFLRFNRITAVEKDLKMLPKLTMLSIRENKIKHLPAEIGELCNLITL 238
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ NQLE LP +I +Q+ +L +N + L + L+ L + +N+++ V R
Sbjct: 239 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAVPRS- 297
Query: 172 FQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
LD ++L+NN I+++ LS L K+ L L+ N + + + ++++
Sbjct: 298 LSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSSIYSLNM 357
Query: 231 SYNKINK--FGTRNEGK 245
+N+INK FG + K
Sbjct: 358 EHNRINKIPFGIFSRAK 374
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
S++ LT + L+L N+L+SL ++G L L L + +N L +LP + +L L
Sbjct: 113 SIKDLTQITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLR 172
Query: 138 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
+N++ + ++ L+ L + FN+IT V +D + L L +S++ N+I + + +
Sbjct: 173 HNKLREIPPVVYRLSSLTTLFLRFNRITAVEKD-LKMLPKLTMLSIRENKIKHLPAEIGE 231
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 232 LCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 268
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I +L++ N L SL + L +L L L+ N L SL L L KL +L + N+L +
Sbjct: 120 ITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKLREI 179
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + S L +L+ NRIT+++ L+ L KL + ++ N+I + E L NL ++
Sbjct: 180 PPVVYRLSSLTTLFLRFNRITAVEKDLKMLPKLTMLSIRENKIKHLPA-EIGELCNLITL 238
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ +NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 239 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLS 292
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+++ SL ++L+ L L NN + +L EG L +L K+ L + +N +
Sbjct: 280 SLSRLGLRYNRLSAVPRSLSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQ 339
Query: 120 ALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+ P FS + SL +NRI + G+ L NM NQ+T + D F +
Sbjct: 340 SYPVGGPSQFSSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTS 398
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+T + +SGL + L LS+N L + L I L++LR +DL NK+
Sbjct: 399 MVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKK-LPHGIGNLRKLRELDLEENKL 455
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLN 86
DLK P L L + N I H+ P I +L V N L L + T +
Sbjct: 205 DLKMLPKLTMLSIRENKIKHL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 259
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G LS L L + N+L A+P + S+L L NN I++L +
Sbjct: 260 NLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAVPRSLSKCSELDELNLENNNISTLPE 319
Query: 146 GLLRGLTKLQVF------------------------NMDFNQITMVRRDEFQNLHNLDSI 181
GLL L K+ NM+ N+I + F L +
Sbjct: 320 GLLSSLVKVNSLTLARNCFQSYPVGGPSQFSSIYSLNMEHNRINKIPFGIFSRAKVLSKL 379
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL + + LS N + K
Sbjct: 380 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLVSIEVLILSNNLLKKL 435
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL + L L+NN LK L +G L KL+ L +E+N+LE+
Sbjct: 398 SMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLES 457
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 458 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 516
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 517 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 558
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G ++ L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 414 EDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 473
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 474 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 533
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 534 LCSKLSIMSIE 544
>gi|7547262|gb|AAB46746.2| biglycan core protein precursor [Bos taurus]
Length = 369
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLCEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAY-----YNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLCEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|410968050|ref|XP_003990526.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2 [Felis catus]
Length = 1065
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 8/211 (3%)
Query: 36 GTPA--LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
G P + L L++N I I+ AF P + L + N ++ + S L +L L+
Sbjct: 116 GEPTSNITQLSLIHNLIPEINAEAFQFYPALENLDLSSNIISEIKTSSFPRMQLKYLNLS 175
Query: 92 NNRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-L 148
NNR+ LE G LS L+V + +N++ +P I L L N+I ++GL
Sbjct: 176 NNRITILEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNKIKVIEGLTF 235
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLS 207
+GL L+ M N I+ ++ F L N++ + L++N +T +N L GL L LY+S
Sbjct: 236 QGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVS 295
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N + D +RL +DLSYN++ +
Sbjct: 296 QNAVERISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVSQNAV 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLEKLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL +++L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 NLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 33/211 (15%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
+G +L +L + N I+ + + AF + +L + NNLT +N L GL L L++
Sbjct: 235 FQGLDSLRSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYV 294
Query: 91 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGL 147
+ N ++ + +L L + NQL L S S L L +NR+T + DG+
Sbjct: 295 SQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLEKLNLGDNRVTHIADGV 354
Query: 148 LRGLTKLQVFNM---------------------------DFNQITMVRRDEFQNLHNLDS 180
R L+ LQ N+ NQI + + F L +L+
Sbjct: 355 FRFLSNLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEH 414
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ L NN I S+ + T+L L L+ + L
Sbjct: 415 LDLNNNAIMSIQENAFSQTRLKELILNTSSL 445
>gi|418721889|ref|ZP_13281061.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410741686|gb|EKQ90441.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 351
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 11/201 (5%)
Query: 44 LLVNNNITHIHEN---AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNR 94
LL N I H++ N P I +L + N+ T L + L +L L + +N+
Sbjct: 111 LLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQ 170
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
LK+L ++G L L L++E +QL+ LP +I L L NN++T L + L L
Sbjct: 171 LKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLKNL 230
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ D NQ+T++ + E L NL ++ L+NNQ+ ++ + L L LYLS NQL +
Sbjct: 231 LTLSSDNNQLTVLPK-EIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQL-KT 288
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
L ++ LK LR + L N++
Sbjct: 289 LPKEVGQLKNLRDLSLDNNQL 309
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + LT L + L +L L L+NN+L +L ++G L L++L + NQL
Sbjct: 20 PLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQL 79
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L NNN++T+L + L L++ ++ NQ+T++ ++ +Q L NL
Sbjct: 80 TILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQ-LKNL 138
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L N T + + L L L + HNQL + L +I LK L + L ++++
Sbjct: 139 EDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQL-KTLPKEIGQLKNLGELILEHSQL 194
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N LT L + L +L +L LNNN+L +L ++G L L++L + NQL L
Sbjct: 69 LKILHLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVL 128
Query: 122 PSDI-QL----------------------FSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
P +I QL LGSL +N++ +L + L L
Sbjct: 129 PKEIWQLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELI 188
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
++ +Q+ + + E L +L +SL+NNQ+T + + L L L +NQLT L +
Sbjct: 189 LEHSQLKTLPK-EIGQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLT-VLPKE 246
Query: 219 IRGLKRLRTVDLSYNKI 235
I L+ L T+DL N++
Sbjct: 247 IGLLQNLVTLDLRNNQL 263
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L L +++LK+L ++G L LQ L + NQL LP +I+
Sbjct: 169 NQLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLK 228
Query: 130 QLGSLYANNNRITSLD---GLLRGLT-------KLQVFNMDFNQITMVRR---------- 169
L +L ++NN++T L GLL+ L +L+ + Q+ +R
Sbjct: 229 NLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQLKT 288
Query: 170 --DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
E L NL +SL NNQ+ ++ + L L +L+L N
Sbjct: 289 LPKEVGQLKNLRDLSLDNNQLETLPKEVGQLKNLRWLFLDAN 330
>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 310
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 45 LVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L NN +T + ++ ++KL++ N LT+L + L +L L L +N+LK+L ++G
Sbjct: 49 LTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIG 108
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L L++L + N+L +LP DI +L L+ ++N++ +L + L KL+ + NQ
Sbjct: 109 QLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQ 168
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+TM+ +D Q L L + L +NQ+ ++ + L L L L NQL L DI L+
Sbjct: 169 LTMLPKDIGQ-LQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLAT-LPKDIGKLQ 226
Query: 224 RLRTVDLSYNKI 235
L+ +DL N++
Sbjct: 227 NLQVLDLGGNQL 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Query: 43 LLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L N +T + E+ + ++ LH+ N L +L + L +L L L++N+L SL
Sbjct: 70 LYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKD 129
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L KLQ L ++ NQL LP DI +L L NN++T L + L KLQ ++
Sbjct: 130 IGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHLGD 189
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQ+ + +D L NL + L +NQ+ ++ + L L L L NQL L DI
Sbjct: 190 NQLRTLPKD-IGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLAT-LPKDIGK 247
Query: 222 LKRLRTVDL 230
L+ L+ + L
Sbjct: 248 LQNLQKLHL 256
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 50 ITHIHEN---AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG 100
+ H+++N P I R L + N LTSL + L L L L++N+L++L
Sbjct: 92 VLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPK 151
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
+G L KL+ L++ NQL LP DI +L L+ +N++ +L + L L+V +D
Sbjct: 152 DIGKLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLD 211
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
NQ+ + +D L NL + L NQ+ ++ + L L L+L+ + T
Sbjct: 212 SNQLATLPKD-IGKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLHLNGYEFT 262
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
+L+ TD+ L L NN+L +L +G L LQ L ++ NQL LP DI +L L+
Sbjct: 37 ALQNPTDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLY 96
Query: 138 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
+N++ +L + L L+V + N++T + +D Q L L + L +NQ+ ++ +
Sbjct: 97 DNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQ-LQKLQRLHLDDNQLRTLPKDIGK 155
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L KL L L +NQLT L DI L++L+ + L N++
Sbjct: 156 LQKLRELLLYNNQLT-MLPKDIGQLQKLQRLHLGDNQL 192
>gi|354494479|ref|XP_003509364.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2 [Cricetulus griseus]
Length = 1039
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 6/210 (2%)
Query: 35 KGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
+ TP + L LV+N I I+ A + L + N ++ + S L +L L+N
Sbjct: 95 EPTPNITLLSLVHNLIPEINAEALQLYSALESLDLSSNIISEIKTSSFPQMSLKYLNLSN 154
Query: 93 NRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LR 149
NR+ +LE G LS L+V + +N++ +P + L L NRI ++GL +
Sbjct: 155 NRITTLEAGCFDNLSGSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQ 214
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSH 208
GL L+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S
Sbjct: 215 GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQ 274
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N + D +RL +DLSYN++ +
Sbjct: 275 NAIERISPDAWEFCQRLSELDLSYNQLTRL 304
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 218 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAI 277
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 278 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 337
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GL L L L NQ+ GL+ L +DL+
Sbjct: 338 NLQTLDLRNNEISWAIEDSSEAFAGLKSLTKLTLQGNQIKSITQKAFIGLESLEYLDLNN 397
Query: 233 NKI 235
N I
Sbjct: 398 NAI 400
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 45 LVNNNITHIHENAF---PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG- 100
L NN IT + F ++ + + N ++ + + L L +L L NR+K +EG
Sbjct: 152 LSNNRITTLEAGCFDNLSGSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGL 211
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFS--QLGSLYANNNRITSLD-GLLRGLTKLQVF 157
L L+ L +++N + L D F + L +N +T ++ G L GL LQ
Sbjct: 212 TFQGLDSLRSLKMQRNGISKL-KDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQL 270
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 216
M N I + D ++ L + L NQ+T ++ S+ GL+ L L L N++T
Sbjct: 271 YMSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIAD 330
Query: 217 DDIRGLKRLRTVDLSYNKIN 236
R L L+T+DL N+I+
Sbjct: 331 GVFRFLSNLQTLDLRNNEIS 350
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 34 LKGTPALITLLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
L G L L + N I I +A F + +L + +N LT L+ S GL+ L L L
Sbjct: 261 LYGLRMLQQLYMSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNL 320
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
+NR+ + +G LS LQ L + N++ +A + + GL +
Sbjct: 321 GDNRVTHIADGVFRFLSNLQTLDLRNNEIS---------------WAIEDSSEAFAGL-K 364
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
LTKL + NQI + + F L +L+ + L NN ITS+ + T L L L+ +
Sbjct: 365 SLTKL---TLQGNQIKSITQKAFIGLESLEYLDLNNNAITSIQENAFSQTHLKELVLNTS 421
Query: 210 QL 211
L
Sbjct: 422 SL 423
>gi|326441151|ref|ZP_08215885.1| hypothetical protein SclaA2_08794 [Streptomyces clavuligerus ATCC
27064]
Length = 309
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 29 LTSDDLKGTPALI-------TLLLVNNNITHIHENAFPPTI-------RKLHVGFNNLTS 74
L + L PA I TL L +N +T I PP++ R L++ N +TS
Sbjct: 75 LAGNRLSSVPAEIGALSRLHTLDLGHNELTDI-----PPSLGDVTGLSRYLYLSDNKITS 129
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
+ +SL L L +L + +NRL +L + G L+ L+ L + N+L LP I +L
Sbjct: 130 VPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIGALRELREA 189
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ NR+T L + GL L+ + N++T + D L L + L+NN++ ++ +
Sbjct: 190 HLMGNRLTGLPEEIGGLADLRELRLMDNRVTAL-PDTIGGLVRLTRLDLRNNELRAVPDA 248
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +L +L L +N+L E L + L RL +DL +N +
Sbjct: 249 IGRLDRLTHLDLRNNRLHE-LPPTLAALPRLEKLDLRWNPL 288
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 26/199 (13%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + N + +++ GLT L L L N L ++ LG L ++++L + N+L ++P+
Sbjct: 26 ELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPA 85
Query: 124 DIQLFSQLGS------------------------LYANNNRITSLDGLLRGLTKLQVFNM 159
+I S+L + LY ++N+ITS+ L L L+ N+
Sbjct: 86 EIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNI 145
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
N++T + + F +L +L + L +N++T + S+ L +L +L N+LT L ++I
Sbjct: 146 TDNRLTAL-PERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTG-LPEEI 203
Query: 220 RGLKRLRTVDLSYNKINKF 238
GL LR + L N++
Sbjct: 204 GGLADLRELRLMDNRVTAL 222
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+ H+ N LT L + GL DL L L +NR+ +L +G L +L L + N+L A+
Sbjct: 186 LREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAV 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
P I +L L NNR+ L L L +L+ ++ +N + +
Sbjct: 246 PDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLAL 290
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
L + FN L L L L L L L++N+ + L+ LQ+L + +N L +PS
Sbjct: 3 ALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPS 62
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS- 182
+ ++ L NR++S+ + L++L ++ N++T D +L ++ +S
Sbjct: 63 GLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELT----DIPPSLGDVTGLSR 118
Query: 183 ---LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +N+ITS+ SL L L YL ++ N+LT L + L LR + L +N++
Sbjct: 119 YLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTA-LPERFGDLASLRELRLYHNRL 173
>gi|418741032|ref|ZP_13297408.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|410751627|gb|EKR08604.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 288
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N +L + L +L L LN N+L L ++G L L+ L + NQ
Sbjct: 45 PLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQF 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +++ L LY +N++T+L + L L+V + NQ + + E L NL
Sbjct: 105 TILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L NQ+T++ + + L L LYL NQLT L ++I L+ L+++ LS N++
Sbjct: 164 QTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTA-LPNEIGQLQNLQSLYLSTNRL 219
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++G N LT+L N + L +L L L +N+ K++ ++G L LQ L + NQL AL
Sbjct: 117 LKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTAL 176
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L SLY +N++T+L + L LQ + N++T + +E L NL S+
Sbjct: 177 PNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTL-PNEIGQLQNLQSL 235
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L +N +T++ + L L L L +N+L
Sbjct: 236 YLGSNLLTTLPKGIGQLKNLQKLDLRNNEL 265
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N LT+L N + L +L L+L+ NRL +L ++G L LQ L + N L L
Sbjct: 186 LQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTL 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLD-GLLRG-LTKLQVF 157
P I L L NN + S + G +R L K Q++
Sbjct: 246 PKGIGQLKNLQKLDLRNNELFSEEKGRIRKLLPKCQIY 283
>gi|431896988|gb|ELK06252.1| Leucine-rich repeat-containing protein 40 [Pteropus alecto]
Length = 574
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ L L ++N++
Sbjct: 55 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQRLNVSHNKLK 114
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++T + + F+ L NL+ + L NN++T++ +S S L+ L
Sbjct: 115 ILPEEITNLRNLKGLYLQHNELTCI-PEGFEQLFNLEDLDLSNNRLTTIPASFS-LSSLV 172
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL L +I G+KRL+ +D + N
Sbjct: 173 RLNLSSNQLKS-LPAEISGMKRLKHLDCNSN 202
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P + L + N LTSL +++R L +L L +++N+LK L ++ L L+ L ++ N+L
Sbjct: 78 PALTVLDIHDNQLTSLPSAIRELENLQRLNVSHNKLKILPEEITNLRNLKGLYLQHNELT 137
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P + L L +NNR+T++ L+ L N+ NQ+ + E + L
Sbjct: 138 CIPEGFEQLFNLEDLDLSNNRLTTIPASF-SLSSLVRLNLSSNQLKSLPA-EISGMKRLK 195
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
+ +N + ++ L+G+ L LYL N+L L + K L+ + + N+I G
Sbjct: 196 HLDCNSNLLETIPPELAGMESLELLYLRRNKLR--FLPEFPSCKLLKELHVGENQIEMLG 253
Query: 240 T 240
Sbjct: 254 A 254
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L + +L L KL L + N L +LP +++ +L ++ + NR
Sbjct: 423 VSDVNLSF---NKLSFISVELCVLQKLTFLDLRNNFLSSLPKEMESLIRLQTINLSFNRF 479
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V ++ + + NL ++ LQNN + + L L
Sbjct: 480 RILPEVLYHIPTLETVLVSNNQVGSVDPEKLKTMENLITLDLQNNDLLQIPPELGNCVNL 539
Query: 202 AYLYLSHN 209
L L N
Sbjct: 540 RTLLLDGN 547
>gi|255088281|ref|XP_002506063.1| predicted protein [Micromonas sp. RCC299]
gi|226521334|gb|ACO67321.1| predicted protein [Micromonas sp. RCC299]
Length = 250
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 47 NNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
NN +T + E ++R+L + N LT L + LT L LFL+ N+L L ++G L
Sbjct: 59 NNQLTSVPEEIGLLTSLRELVLYGNQLTRLPAKIWQLTSLRKLFLDQNQLTRLPAKIGQL 118
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
L+ L + N L LP+ I + L +L+ + N++TS+ +R LT LQ ++ N +T
Sbjct: 119 RSLKELSLYHNGLTRLPAKIGKLTSLKTLHLSRNQLTSVPAEIRQLTSLQELSLGGNLLT 178
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
V E L +L + L +N++TS+ + + LT L L+L +N+LT L IR L+ +
Sbjct: 179 SV-PAEIGQLTSLRVLYLFDNKLTSVPAEIEQLTSLKELWLFNNKLTS-LPAAIRELRAM 236
Query: 226 RT-VDLSYN 233
VDL N
Sbjct: 237 GCNVDLDDN 245
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 25/201 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+RKL++ N LTS+ + LT L L LNNN+L S+ ++G L+ L+ LV+ NQL
Sbjct: 28 ALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQLTSVPEEIGLLTSLRELVLYGNQLTR 87
Query: 121 LPSDIQLFSQLGSLYANNNRITSL-----------------DGLLR------GLTKLQVF 157
LP+ I + L L+ + N++T L +GL R LT L+
Sbjct: 88 LPAKIWQLTSLRKLFLDQNQLTRLPAKIGQLRSLKELSLYHNGLTRLPAKIGKLTSLKTL 147
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
++ NQ+T V E + L +L +SL N +TS+ + + LT L LYL N+LT +
Sbjct: 148 HLSRNQLTSV-PAEIRQLTSLQELSLGGNLLTSVPAEIGQLTSLRVLYLFDNKLTS-VPA 205
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
+I L L+ + L NK+
Sbjct: 206 EIEQLTSLKELWLFNNKLTSL 226
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L ++ + L+ L L L N+L S+ ++ L+ L+ L + NQL ++P +I L + L
Sbjct: 16 LCAVPAEVWRLSALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQLTSVPEEIGLLTSL 75
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L N++T L + LT L+ +D NQ+T + + L +L +SL +N +T +
Sbjct: 76 RELVLYGNQLTRLPAKIWQLTSLRKLFLDQNQLTRL-PAKIGQLRSLKELSLYHNGLTRL 134
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ + LT L L+LS NQLT + +IR L L+ + L N
Sbjct: 135 PAKIGKLTSLKTLHLSRNQLTS-VPAEIRQLTSLQELSLGGN 175
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
L ++ ++ LS L+ L + NQL ++P++I + L L NNN++TS+ + LT L
Sbjct: 16 LCAVPAEVWRLSALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQLTSVPEEIGLLTSL 75
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ + NQ+T + +Q L +L + L NQ+T + + + L L L L HN LT
Sbjct: 76 RELVLYGNQLTRLPAKIWQ-LTSLRKLFLDQNQLTRLPAKIGQLRSLKELSLYHNGLTR- 133
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
L I L L+T+ LS N++
Sbjct: 134 LPAKIGKLTSLKTLHLSRNQL 154
>gi|255077272|ref|XP_002502281.1| predicted protein [Micromonas sp. RCC299]
gi|226517546|gb|ACO63539.1| predicted protein [Micromonas sp. RCC299]
Length = 228
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTSL + LT L L+L+ N+L S+ ++ L+ L L ++ N L +
Sbjct: 29 SLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLTSVPEEIWQLTSLVRLDLDGNLLTS 88
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L +L +N++TS+ + LT L V +D NQ+T + E L +L
Sbjct: 89 VPAEIGQLTSLETLLLYDNQLTSVPAEIGQLTSLTVLGLDGNQLTSLPA-EIGQLVSLKE 147
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NQ+TS+ + + LT + L L NQLT +I L L +DL NK+ +
Sbjct: 148 LYLNGNQLTSLPAEIGQLTSMEGLGLDGNQLTSV-PAEIGQLTSLVDLDLGRNKLTRV 204
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Query: 43 LLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L N +T + E + T + +L + N LTS+ + LT L L L +N+L S+ +
Sbjct: 56 LYLDENQLTSVPEEIWQLTSLVRLDLDGNLLTSVPAEIGQLTSLETLLLYDNQLTSVPAE 115
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L+ L +L ++ NQL +LP++I L LY N N++TSL + LT ++ +D
Sbjct: 116 IGQLTSLTVLGLDGNQLTSLPAEIGQLVSLKELYLNGNQLTSLPAEIGQLTSMEGLGLDG 175
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
NQ+T V E L +L + L N++T + +++
Sbjct: 176 NQLTSVPA-EIGQLTSLVDLDLGRNKLTRVPAAI 208
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
LT L L L+ N+L SL ++G L+ L+ L +++NQL ++P +I + L L + N +
Sbjct: 27 LTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLTSVPEEIWQLTSLVRLDLDGNLL 86
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
TS+ + LT L+ + NQ+T V E L +L + L NQ+TS+ + + L L
Sbjct: 87 TSVPAEIGQLTSLETLLLYDNQLTSVPA-EIGQLTSLTVLGLDGNQLTSLPAEIGQLVSL 145
Query: 202 AYLYLSHNQLTEF 214
LYL+ NQLT
Sbjct: 146 KELYLNGNQLTSL 158
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
++ ++G L+ L L ++ NQL +LP++I + L LY + N++TS+ + LT L
Sbjct: 19 AVPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLTSVPEEIWQLTSLVR 78
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
++D N +T V E L +L+++ L +NQ+TS+ + + LT L L L NQLT L
Sbjct: 79 LDLDGNLLTSVPA-EIGQLTSLETLLLYDNQLTSVPAEIGQLTSLTVLGLDGNQLTS-LP 136
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+I L L+ + L+ N++
Sbjct: 137 AEIGQLVSLKELYLNGNQLTSL 158
>gi|20071327|gb|AAH26364.1| Shoc2 protein [Mus musculus]
Length = 524
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R +H+ L S++ LT L L+L +N+L+SL ++G L L L + +N L +LP
Sbjct: 110 RSIHI-------LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +L L +N++ + ++ L L + FN+IT V +D +NL L +S
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLPKLSMLS 221
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
++ N+I + + + L L L ++HNQL E L +I ++ +DL +N
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHN 271
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 58 FPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP++++L ++ N L SL + L +L L L+ N L SL L L KL++L
Sbjct: 115 LPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRML 174
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ N+L +PS + L +LY NRIT+++ ++ L KL + ++ N+I + E
Sbjct: 175 DLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQL-PAE 233
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L NL ++ + +NQ+ + + T++ L L HN L + L D I L L + L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLD-LPDTIGNLSSLNRLGLR 292
Query: 232 YNKINKF 238
YN+++
Sbjct: 293 YNRLSAI 299
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+LP+
Sbjct: 406 ELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPN 465
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+I L L NN++++L + LT L + N +T + + +NL
Sbjct: 466 EIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGRNLR 518
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLN 86
D+K P L L + N I + P I +L V N L L + T +
Sbjct: 210 DIKNLPKLSMLSIRENKIKQL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G LS L L + N+L A+P + S L L NN I++L +
Sbjct: 265 NLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPE 324
Query: 146 GLLRGLTKL----------QVF--------------NMDFNQITMVRRDEFQNLHNLDSI 181
LL L KL Q++ NM+ N+I + F L +
Sbjct: 325 SLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKL 384
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL L + LS N + K
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLVSLEVLILSNNLLKKL 440
>gi|57163947|ref|NP_001009201.1| biglycan precursor [Ovis aries]
gi|8134614|sp|O46390.1|PGS1_SHEEP RecName: Full=Biglycan; AltName: Full=Bone/cartilage proteoglycan
I; AltName: Full=PG-S1; Flags: Precursor
gi|2655356|gb|AAB87988.1| biglycan precursor [Ovis aries]
Length = 369
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|110350683|ref|NP_847888.2| biglycan precursor [Bos taurus]
gi|94730417|sp|P21809.3|PGS1_BOVIN RecName: Full=Biglycan; AltName: Full=Bone/cartilage proteoglycan
I; AltName: Full=Leucine-rich PG I; AltName: Full=PG-S1;
Flags: Precursor
gi|60650302|gb|AAX31383.1| biglycan preproprotein [Bos taurus]
gi|109658403|gb|AAI18461.1| Biglycan [Bos taurus]
gi|296471054|tpg|DAA13169.1| TPA: biglycan precursor [Bos taurus]
gi|440891078|gb|ELR45013.1| Biglycan [Bos grunniens mutus]
Length = 369
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|421129336|ref|ZP_15589537.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410359532|gb|EKP06630.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 288
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N +T+L + + L +L L LN NRL+++ ++G L L+ L I N+L+ L
Sbjct: 75 LKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIGLNKLKTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQSMHLSTNELTKLPQ-EIKNLEGLIEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +NQ T++ + L L L L NQL L +I LK L+ + L N++ K
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LPSEIGNLKNLKELYLEENQLTKL 249
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L +G N L +L + L +L L+L+ N+LK L ++ L KLQ + + N+L L
Sbjct: 121 LKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQSMHLSTNELTKL 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +Y +N+ T+L + L L+ + NQ+ + E NL NL +
Sbjct: 181 PQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLP-SEIGNLKNLKEL 239
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
L+ NQ+T + ++ L KL+ L L NQ F ++ +KRL
Sbjct: 240 YLEENQLTKLPKQIAALKKLSRLSLEGNQ---FPSEEKERIKRL 280
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L LN N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L S+ L N++T
Sbjct: 120 NLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQ-EIWNLKKLQSMHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLEGLIEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E N L+ LP +I L L N N IT+L + L LQV +++ N++ + + E
Sbjct: 58 EDNPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPK-EIG 116
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
NL NL +S+ N++ ++ + L L LYLS NQL + L +I LK+L+++ LS N
Sbjct: 117 NLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQL-KVLPQEIWNLKKLQSMHLSTN 175
Query: 234 KINKF 238
++ K
Sbjct: 176 ELTKL 180
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
+N LK+L ++G L L+ L + N++ LPS+I L L N NR+ ++ + L
Sbjct: 59 DNPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNL 118
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L+ ++ N++ + + E NL NL + L NQ+ + + L KL ++LS N+L
Sbjct: 119 KNLKELSIGLNKLKTLPK-EIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQSMHLSTNEL 177
Query: 212 TEFLLDDIRGLKRLRTVDLSYNK 234
T+ L +I+ L+ L + L N+
Sbjct: 178 TK-LPQEIKNLEGLIEIYLYDNQ 199
>gi|421130172|ref|ZP_15590369.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410358631|gb|EKP05787.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 686
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 27/225 (12%)
Query: 38 PALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
P L LLL++N +T + + A +R L++ N + ++N R +++ L L +NRL
Sbjct: 420 PRLKELLLMDNQLTELPDRLADLKFLRNLNLSGNKIAQISNLNREFSEVRELGLYDNRLV 479
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQ-----------------------LFSQLGS 133
SL+G + KL+ L+I N+LE + +I F + S
Sbjct: 480 SLDG-IRCFPKLKELLIWGNELETISPEISSLKNLTRISAERNKISNFPNIEIAFESVTS 538
Query: 134 LYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L N N++T + +GL R L+ + NQ+ + D F+ LD++SL NNQ++ +
Sbjct: 539 LSLNKNQLTQIPEGLTRLFPNLKSLGLSDNQLEEIPADLFETFPKLDTLSLSNNQLSDLP 598
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
S++ L L +YL +N+ + + + ++ LK+L+ + LS N+I++
Sbjct: 599 KSIARLESLKNIYLKNNRFIQ-IPEILKELKKLKDISLSGNQISE 642
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 32 DDLKGTPALITLLLVNNNITHIH-ENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D ++ P L LL+ N + I E + + ++ N +++ N + L L
Sbjct: 482 DGIRCFPKLKELLIWGNELETISPEISSLKNLTRISAERNKISNFPNIEIAFESVTSLSL 541
Query: 91 NNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD--- 145
N N+L + EG L+ L + NQLE +P+D+ + F +L +L +NN+++ L
Sbjct: 542 NKNQLTQIPEGLTRLFPNLKSLGLSDNQLEEIPADLFETFPKLDTLSLSNNQLSDLPKSI 601
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
L L + + N F QI + ++ L L ISL NQI+ + LS +T+L L
Sbjct: 602 ARLESLKNIYLKNNRFIQIPEILKE----LKKLKDISLSGNQISELPEFLSEMTELKELK 657
Query: 206 LSHNQLTE 213
+ +N + +
Sbjct: 658 IGNNPIAQ 665
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 4/202 (1%)
Query: 38 PALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
P+L +L L N++++ ++ + + L + N+LT++ + L L L L +N+L
Sbjct: 373 PSLKSLYLTNSSLSIENKTSIFNSSQLESLCLNANSLTTIPEFVFQLPRLKELLLMDNQL 432
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
L +L L L+ L + N++ + + + FS++ L +NR+ SLDG +R KL+
Sbjct: 433 TELPDRLADLKFLRNLNLSGNKIAQISNLNREFSEVRELGLYDNRLVSLDG-IRCFPKLK 491
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
+ N++ + E +L NL IS + N+I++ + + L L+ NQLT+
Sbjct: 492 ELLIWGNELETI-SPEISSLKNLTRISAERNKISNFPNIEIAFESVTSLSLNKNQLTQIP 550
Query: 216 LDDIRGLKRLRTVDLSYNKINK 237
R L+++ LS N++ +
Sbjct: 551 EGLTRLFPNLKSLGLSDNQLEE 572
>gi|417785421|ref|ZP_12433125.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|409951286|gb|EKO05801.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
Length = 408
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ FN LT L + L +L L L NRL L ++G L L +L + NQL L
Sbjct: 217 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTIL 276
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NR + + LQV ++ N++T++ +E L NL +
Sbjct: 277 PKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTIL-PEEIGQLQNLQKL 335
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L KL L L HNQL L ++I+ LK L+ + L N +
Sbjct: 336 HLSRNQLTTLPKEIGRLQKLESLGLDHNQLAT-LPEEIKQLKNLKKLYLHNNPL 388
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 8/179 (4%)
Query: 61 TIRKLHVGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
++RKL +G N T L + L +L L L NRL L ++G L L++L + QN+L
Sbjct: 191 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 250
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLH 176
LP +I L L + N++T L + L LQ N+++N+ ++ +FQNL
Sbjct: 251 TILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQ 310
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LD L N++T + + L L L+LS NQLT L +I L++L ++ L +N++
Sbjct: 311 VLD---LYQNRLTILPEEIGQLQNLQKLHLSRNQLTT-LPKEIGRLQKLESLGLDHNQL 365
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T+L +L+ ++ L L+ ++LK L ++G L LQ+L E NQL LP +I L
Sbjct: 42 TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 101
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ NN++T+L + L L+V +++ NQ+T + +E L NL ++L N++ +
Sbjct: 102 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTL-PEEIGKLQNLQELNLFVNRLNILP 160
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L L LYLS N+LT L ++I L+ LR + L
Sbjct: 161 KEIGRLQNLQELYLSLNRLT-ILPEEIGQLESLRKLSL 197
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + + L L + L +L L NN+L +L ++G L LQ L ++ NQL
Sbjct: 51 PNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQL 110
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L+ NNN++T+L + L LQ N+ N++ ++ + E L NL
Sbjct: 111 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPK-EIGRLQNL 169
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYL-SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T + + L L L L N+ L +I L+ L+ + L +N++
Sbjct: 170 QELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRL 227
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 57 AFPPTIRK------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I + L + N LT L + L +L L L+ N+L +L ++G L KL+
Sbjct: 298 AFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLES 357
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L ++ NQL LP +I+ L LY +NN + S
Sbjct: 358 LGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLS 390
>gi|307211084|gb|EFN87327.1| Leucine-rich repeat protein SHOC-2 [Harpegnathos saltator]
Length = 506
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ 130
++T L +++R LT L +L N+L SL Q+G L+ L+ L + +N L +LP+ ++ +
Sbjct: 36 SITHLPSTVRDLTHLKEFYLYGNKLVSLPSQIGCLTNLETLALNENSLTSLPNTLENLKR 95
Query: 131 LGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L L +N++ + ++ L L + FN+I V D +NL NL ++SL+ N+I
Sbjct: 96 LRVLDLRHNKLNEIPDVVYKLKSLVTLFLRFNRIKYV-SDNIRNLTNLATLSLRENKIKE 154
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ S + L +SHN L + L ++I +L T+DL +N +
Sbjct: 155 LPSGIGDFLNLHTFDVSHNHL-DHLPEEIGKCVQLSTLDLQHNDL 198
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N LT + + ++ L +L L L+NN LK L + L KL++L +E+N+LE+LP+
Sbjct: 331 ELNLGTNQLTKIPDDIQFLQNLEVLILSNNLLKRLSASIANLRKLRVLDLEENRLESLPN 390
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I +L L +N++TSL + LT L VF++ N + + +E L NL+++ +
Sbjct: 391 EIGFLRELQQLVLQSNQLTSLPRAIGHLTNLTVFSVGENNLNYL-PEEIGTLENLETLHI 449
Query: 184 QNN 186
+N
Sbjct: 450 NDN 452
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 49 NITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
+ITH+ P T+R L ++ N L SL + + LT+L L LN N L SL L
Sbjct: 36 SITHL-----PSTVRDLTHLKEFYLYGNKLVSLPSQIGCLTNLETLALNENSLTSLPNTL 90
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
L +L++L + N+L +P + L +L+ NRI + +R LT L ++ N
Sbjct: 91 ENLKRLRVLDLRHNKLNEIPDVVYKLKSLVTLFLRFNRIKYVSDNIRNLTNLATLSLREN 150
Query: 163 QITMVRR--DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
+I + +F NLH D + +N + + + +L+ L L HN L + + D I
Sbjct: 151 KIKELPSGIGDFLNLHTFD---VSHNHLDHLPEEIGKCVQLSTLDLQHNDLLD-IPDSIG 206
Query: 221 GLKRLRTVDLSYNKI 235
L L + L YN +
Sbjct: 207 NLVLLMRLGLRYNAL 221
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP 122
+L + +N LTS+ SL ++ + N + + +G L +LS L + + +N + P
Sbjct: 213 RLGLRYNALTSIPESLSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSRNNFTSYP 272
Query: 123 SD-IQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
S F+ + S+ N+I + G+ KL NM NQ+T + D N+
Sbjct: 273 SGGPSQFTNIYSISMEQNQIDKIPYGIFSRAKKLTKLNMRDNQLTALPLD-IGTWVNMVE 331
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ+T + + L L L LS+N L + L I L++LR +DL N++
Sbjct: 332 LNLGTNQLTKIPDDIQFLQNLEVLILSNN-LLKRLSASIANLRKLRVLDLEENRL 385
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L + + + L L LFL NR+K + + L+ L L + +N+++ L
Sbjct: 96 LRVLDLRHNKLNEIPDVVYKLKSLVTLFLRFNRIKYVSDNIRNLTNLATLSLRENKIKEL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS I F L + ++N + L + +L ++ N + + D NL L +
Sbjct: 156 PSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQLSTLDLQHNDLLDIP-DSIGNLVLLMRL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L+ N +TS+ SLS + + N +++ + L L T+ LS N + +
Sbjct: 215 GLRYNALTSIPESLSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSRNNFTSYPS 273
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 9/200 (4%)
Query: 49 NITHIHENAFPPTIRK------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
+++H H + P I K L + N+L + +S+ L L L L N L S+ L
Sbjct: 169 DVSHNHLDHLPEEIGKCVQLSTLDLQHNDLLDIPDSIGNLVLLMRLGLRYNALTSIPESL 228
Query: 103 GTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMD 160
+ +E N + +P + S L ++ + N TS G T + +M+
Sbjct: 229 SNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSRNNFTSYPSGGPSQFTNIYSISME 288
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQI + F L +++++NQ+T++ + + L L NQLT+ + DDI+
Sbjct: 289 QNQIDKIPYGIFSRAKKLTKLNMRDNQLTALPLDIGTWVNMVELNLGTNQLTK-IPDDIQ 347
Query: 221 GLKRLRTVDLSYNKINKFGT 240
L+ L + LS N + +
Sbjct: 348 FLQNLEVLILSNNLLKRLSA 367
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L L+ S+ L L L L NRL+SL ++G L +LQ LV++ NQL +LP I +
Sbjct: 360 NLLKRLSASIANLRKLRVLDLEENRLESLPNEIGFLRELQQLVLQSNQLTSLPRAIGHLT 419
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
L N + L + L L+ +++ N NLHNL
Sbjct: 420 NLTVFSVGENNLNYLPEEIGTLENLETLHINDN----------ANLHNL 458
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 173 QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
++L +L L N++ S+ S + LT L L L+ N LT L + + LKRLR +DL +
Sbjct: 45 RDLTHLKEFYLYGNKLVSLPSQIGCLTNLETLALNENSLTS-LPNTLENLKRLRVLDLRH 103
Query: 233 NKINKF 238
NK+N+
Sbjct: 104 NKLNEI 109
>gi|456825485|gb|EMF73881.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 405
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ FN LT L + L +L L L NRL L ++G L L +L + NQL L
Sbjct: 214 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTIL 273
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NR + + LQV ++ N++T++ +E L NL +
Sbjct: 274 PKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTIL-PEEIGQLQNLQKL 332
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L KL L L HNQL L ++I+ LK L+ + L N +
Sbjct: 333 HLSRNQLTTLPKEIGRLQKLESLGLDHNQLAT-LPEEIKQLKNLKKLYLHNNPL 385
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 8/179 (4%)
Query: 61 TIRKLHVGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
++RKL +G N T L + L +L L L NRL L ++G L L++L + QN+L
Sbjct: 188 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 247
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLH 176
LP +I L L + N++T L + L LQ N+++N+ ++ +FQNL
Sbjct: 248 TILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQ 307
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LD L N++T + + L L L+LS NQLT L +I L++L ++ L +N++
Sbjct: 308 VLD---LYQNRLTILPEEIGQLQNLQKLHLSRNQLTT-LPKEIGRLQKLESLGLDHNQL 362
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T+L +L+ ++ L L+ ++LK L ++G L LQ+L E NQL LP +I L
Sbjct: 39 TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 98
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ NN++T+L + L L+V +++ NQ+T + +E L NL ++L N++ +
Sbjct: 99 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTL-PEEIGKLQNLQELNLFVNRLNILP 157
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L L LYLS N+LT L ++I L+ LR + L
Sbjct: 158 KEIGRLQNLQELYLSLNRLT-ILPEEIGQLESLRKLSL 194
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + + L L + L +L L NN+L +L ++G L LQ L ++ NQL
Sbjct: 48 PNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQL 107
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L+ NNN++T+L + L LQ N+ N++ ++ + E L NL
Sbjct: 108 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPK-EIGRLQNL 166
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYL-SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T + + L L L L N+ L +I L+ L+ + L +N++
Sbjct: 167 QELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRL 224
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 57 AFPPTIRK------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I + L + N LT L + L +L L L+ N+L +L ++G L KL+
Sbjct: 295 AFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLES 354
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L ++ NQL LP +I+ L LY +NN + S
Sbjct: 355 LGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLS 387
>gi|418755276|ref|ZP_13311483.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964287|gb|EKO32177.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 358
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL +G N LT+L + L +L L L N+L +L ++G L LQ L +E NQL L
Sbjct: 190 LQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTL 249
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY NNR+T+L + L L++ ++ NQ+ + + E L NL +
Sbjct: 250 PKEIGKLQNLKKLYLYNNRLTTLPKEIEDLQNLKILSLGSNQLATLPK-EVGKLQNLQEL 308
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L NN++T++ + L L L L N
Sbjct: 309 YLYNNRLTTLPKEIGKLQNLKELNLGGN 336
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
G N LT+L + L +L L LN+N+ +L ++ L KLQ L + +NQL LP +I
Sbjct: 150 GGNKLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWN 209
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
L +L N++ +L + L LQ +++ NQ+T + + E L NL + L NN+
Sbjct: 210 LQNLKTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPK-EIGKLQNLKKLYLYNNR 268
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+T++ + L L L L NQL L ++ L+ L+ + L N++
Sbjct: 269 LTTLPKEIEDLQNLKILSLGSNQLAT-LPKEVGKLQNLQELYLYNNRL 315
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N T+L + L L L L N+L +L ++ L L+ L +E NQL L
Sbjct: 167 LQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATL 226
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I L +L N++T+L G L+ L KL ++N N++T + + E ++L NL
Sbjct: 227 PEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYN---NRLTTLPK-EIEDLQNL 282
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+SL +NQ+ ++ + L L LYL +N+LT L +I L+ L+ ++L N
Sbjct: 283 KILSLGSNQLATLPKEVGKLQNLQELYLYNNRLTT-LPKEIGKLQNLKELNLGGN 336
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L +L L+L NNRL +L ++ L L++L + NQL LP ++
Sbjct: 244 NQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEIEDLQNLKILSLGSNQLATLPKEVGKLQ 303
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
L LY NNR+T+L + L L+ N+ N M ++++ Q L
Sbjct: 304 NLQELYLYNNRLTTLPKEIGKLQNLKELNLGGNPSLMNQKEKIQKL 349
>gi|418681501|ref|ZP_13242728.1| leucine rich repeat protein, partial [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400326785|gb|EJO79047.1| leucine rich repeat protein, partial [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
Length = 153
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L + + D+ L L+ +LK+L ++G L LQ L + NQ + P +I+ L L
Sbjct: 12 LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQELFLNYNQFKTFPKEIEQLKSLHKL 71
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +NN++T L + L LQ N+ NQ+ + + E + L NL + L NNQ+T+
Sbjct: 72 YLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISK-EIEQLKNLQKLYLDNNQLTAFPKE 130
Query: 195 LSGLTKLAYLYLSHNQLTEF 214
+ L L L+LS+NQLT F
Sbjct: 131 IGKLQNLKSLFLSNNQLTTF 150
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + +N + + L L+ L+L+NN+L L ++G L LQ L + NQL+ +
Sbjct: 45 LQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTI 104
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
+I+ L LY +NN++T+ + L L+ + NQ+T ++
Sbjct: 105 SKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKE 153
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL++ N LT L + L +L L L NN+LK++ ++ L LQ L ++ NQL A
Sbjct: 67 SLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTA 126
Query: 121 LPSDIQLFSQLGSLYANNNRITSL 144
P +I L SL+ +NN++T+
Sbjct: 127 FPKEIGKLQNLKSLFLSNNQLTTF 150
>gi|345324055|ref|XP_001513272.2| PREDICTED: leucine-rich repeat protein SHOC-2 [Ornithorhynchus
anatinus]
Length = 537
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L
Sbjct: 115 LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRML 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L L + FN++T V +D +NL L +S++ N+I + +
Sbjct: 175 DLRHNKLREIPSVVYRLDSLTTLYLRFNRMTTVEKD-IKNLSKLIMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 234 IGELCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NR+T+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRMTTVEKDIKNLSKLIMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + T++ L L HN+L + L + I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPETIGNLSSLNRLGLRYNRLSAI 299
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 358 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 417
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 418 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 476
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 477 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 518
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRMTTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-------------- 170
I +Q+ +L +N + L + L+ L + +N+++ + R
Sbjct: 257 IGNCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLEN 316
Query: 171 ------------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
F L +++++NQ+TS+ T + L L+ NQLT+ + +D
Sbjct: 317 NNISTLPEXXFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPED 375
Query: 219 IRGLKRLRTVDLSYNKINKF 238
+ GL L + LS N + K
Sbjct: 376 VSGLVSLEVLILSNNLLKKL 395
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 374 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 433
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 434 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 493
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 494 LCSKLSIMSIE 504
>gi|448242545|ref|YP_007406598.1| hypothetical protein SMWW4_v1c27840 [Serratia marcescens WW4]
gi|445212909|gb|AGE18579.1| hypothetical protein SMWW4_v1c27840 [Serratia marcescens WW4]
Length = 293
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L ++ L L L L NNR+ +L G++G L L+ L I +N L ALP+++ L
Sbjct: 134 NQLTALPQAIPSLAALQELRLYNNRIGNLPGEIGQLRALRELHIMKNALTALPAEMALLG 193
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L A NN IT L L +L N+ FNQ+T + + L L S+ L+ N+++
Sbjct: 194 ELEILDAANNAITELPASFCRLPRLSELNLRFNQLTRL-PENIGELTALRSLDLRANRLS 252
Query: 190 SMNSSLSGLTKLAYLYLSHNQLT 212
++ SL L++L L L N T
Sbjct: 253 NLPESLGELSRLRKLDLRWNDFT 275
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 49 NITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
NI+ + PP I +L G N + L +L L L +L+L++N L L
Sbjct: 61 NISCNQLDRLPPEIGQLQQLEMFDFGHNRASELPETLGQLHRLKYLYLSDNGFSDLPRAL 120
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
L +L L NQL ALP I + L L NNRI +L G + L L+ ++ N
Sbjct: 121 AQLQQLVYLNATDNQLTALPQAIPSLAALQELRLYNNRIGNLPGEIGQLRALRELHIMKN 180
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+T + E L L+ + NN IT + +S L +L+ L L NQLT L ++I L
Sbjct: 181 ALTAL-PAEMALLGELEILDAANNAITELPASFCRLPRLSELNLRFNQLTR-LPENIGEL 238
Query: 223 KRLRTVDLSYNKIN 236
LR++DL N+++
Sbjct: 239 TALRSLDLRANRLS 252
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+RK+ + N LT+ S+ +L L ++ N+L L ++G L +L++ N+
Sbjct: 33 ALRKISLYDNLLTAFPASILQHRNLQVLNISCNQLDRLPPEIGQLQQLEMFDFGHNRASE 92
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP + +L LY ++N + L L L +L N NQ+T + + +L L
Sbjct: 93 LPETLGQLHRLKYLYLSDNGFSDLPRALAQLQQLVYLNATDNQLTALPQ-AIPSLAALQE 151
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NN+I ++ + L L L++ N LT L ++ L L +D + N I +
Sbjct: 152 LRLYNNRIGNLPGEIGQLRALRELHIMKNALTA-LPAEMALLGELEILDAANNAITEL 208
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R+LH+ N LT+L + L +L L NN + L L +L L + NQL
Sbjct: 171 ALRELHIMKNALTALPAEMALLGELEILDAANNAITELPASFCRLPRLSELNLRFNQLTR 230
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
LP +I + L SL NR+++L L L++L+ ++ +N T
Sbjct: 231 LPENIGELTALRSLDLRANRLSNLPESLGELSRLRKLDLRWNDFT 275
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT L+ S L + L +N L + + LQ+L I NQL+ LP +I QL
Sbjct: 21 LTQLDESQLTGHALRKISLYDNLLTAFPASILQHRNLQVLNISCNQLDRLPPEIGQLQQL 80
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
+NR + L L L +L+ + N + + R L L ++ +NQ+T++
Sbjct: 81 EMFDFGHNRASELPETLGQLHRLKYLYLSDNGFSDLPR-ALAQLQQLVYLNATDNQLTAL 139
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++ L L L L +N++ L +I L+ LR + + N +
Sbjct: 140 PQAIPSLAALQELRLYNNRIGN-LPGEIGQLRALRELHIMKNALTAL 185
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 34 LKGTPALITLL-------LVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDL 85
L PA + LL NN IT + + P + +L++ FN LT L ++ LT L
Sbjct: 182 LTALPAEMALLGELEILDAANNAITELPASFCRLPRLSELNLRFNQLTRLPENIGELTAL 241
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGS 133
L L NRL +L LG LS+L+ L + N P + + G
Sbjct: 242 RSLDLRANRLSNLPESLGELSRLRKLDLRWNDFTHTPKIVDILRARGC 289
>gi|418686455|ref|ZP_13247621.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410738888|gb|EKQ83620.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 380
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N +L + L +L L LN N+L L ++G L L+ L + NQ
Sbjct: 45 PLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQF 104
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +++ L LY +N++T+L + L L+V + NQ + + E L NL
Sbjct: 105 TILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPK-EIGQLKNL 163
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L NQ+T++ + + L L LYL NQLT L ++I L+ L+++ LS N++
Sbjct: 164 QTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTA-LPNEIGQLQNLQSLYLSTNRL 219
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 105/190 (55%), Gaps = 8/190 (4%)
Query: 50 ITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
+TH P I + L++G+N LT+L N + L +L L+L +N+L +L ++G
Sbjct: 145 LTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIG 204
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L LQ L + N+L LP++I L SLY +N +T+L + L LQ +D+N+
Sbjct: 205 QLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNR 264
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+ + + E L L ++SL N++ ++ + + L L L+LS+NQL + L ++I L+
Sbjct: 265 LYTLPK-EIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYNQL-KTLPNEIEQLQ 322
Query: 224 RLRTVDLSYN 233
L+ +DL N
Sbjct: 323 NLQELDLRNN 332
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++G N LT+L N + L +L L L +N+ K++ ++G L LQ L + NQL AL
Sbjct: 117 LKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTAL 176
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L SLY +N++T+L + L LQ + N++T + +E L NL S+
Sbjct: 177 PNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTL-PNEIGQLQNLQSL 235
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +N +T++ + L L L L +N+L L +I LK+LRT+ L N++
Sbjct: 236 YLGSNLLTTLPKEIGQLQNLQQLELDYNRLYT-LPKEIGRLKKLRTLSLWGNRL 288
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 24/173 (13%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVI-------- 113
++ L++G N LT+L N + L +L L+L+ NRL +L ++G L LQ L +
Sbjct: 186 LQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTL 245
Query: 114 ---------------EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ N+L LP +I +L +L NR+ +L + L LQ +
Sbjct: 246 PKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLH 305
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ +NQ+ + +E + L NL + L+NN +T++ + L L L L +N+L
Sbjct: 306 LSYNQLKTLP-NEIEQLQNLQELDLRNNLLTTLPKGIGQLKNLQKLDLRNNEL 357
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N LT+L + L +L L L+ NRL +L ++G L KL+ L + N+L+ L
Sbjct: 232 LQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTL 291
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I L L+ + N++ +L + L LQ ++ N +T + + Q L NL +
Sbjct: 292 PNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNNLLTTLPKGIGQ-LKNLQKL 350
Query: 182 SLQNNQITSMNSS-LSGLTKLAYLYLSH 208
L+NN++ S + L +Y H
Sbjct: 351 DLRNNELFSEEKGRIRKLLPKCQIYFHH 378
>gi|118103827|ref|XP_001232011.1| PREDICTED: leucine-rich repeat-containing protein 70 [Gallus
gallus]
Length = 642
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 7/214 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDL 85
L ++L G L L + N++I+++H AF P + LH+ NN+ L+ + GL++L
Sbjct: 85 LIPNELTGLQKLAALYMDNSSISYVHPKAFVDLPKLCYLHLNNNNIKRLDPGVFEGLSNL 144
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITS 143
++L+L NN++ + G L ++ L +++N+L L S L L +L NN+I+
Sbjct: 145 HYLYLQNNQIAFVPRGLFSDLLSVRYLTLQRNRLSILGSGTFLGMRNLQTLNLANNKISR 204
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ D L L ++ N +T+V + L NL+ +SL +N I S+ + GL KL
Sbjct: 205 ISDAAFCHLENLVYLFLEGNNLTLVPSNAIGRLENLERLSLSHNPIRSIQRFAFKGLNKL 264
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
YL L +L ++ GL L + LSYN +
Sbjct: 265 RYLSLKSVKLKHIAVNGFFGLSNLSQLILSYNDL 298
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 56/237 (23%)
Query: 32 DDLKGTPALITLL------LVNNNITHIHENAFPPTIRKLHVGFNNLTSL-NNSLRGLTD 84
+++ G PA+ L N ++ I N FP T ++ NN++ L N L GL
Sbjct: 37 NEVLGCPAVCQLCTGRQVTCRNLGLSSIPRN-FPKTTMLVYFSGNNISHLIPNELTGLQK 95
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+++N+ + + P +L L+ NNN I L
Sbjct: 96 LAALYMDNSSISYVH----------------------PKAFVDLPKLCYLHLNNNNIKRL 133
Query: 145 D-GLLRGLTKLQVFNMDFNQITMVRRDEFQNL------------------------HNLD 179
D G+ GL+ L + NQI V R F +L NL
Sbjct: 134 DPGVFEGLSNLHYLYLQNNQIAFVPRGLFSDLLSVRYLTLQRNRLSILGSGTFLGMRNLQ 193
Query: 180 SISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+++L NN+I+ + +++ L L YL+L N LT + I L+ L + LS+N I
Sbjct: 194 TLNLANNKISRISDAAFCHLENLVYLFLEGNNLTLVPSNAIGRLENLERLSLSHNPI 250
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 121 LPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P+++ +L +LY +N+ I+ + L KL +++ N I + F+ L NL
Sbjct: 86 IPNELTGLQKLAALYMDNSSISYVHPKAFVDLPKLCYLHLNNNNIKRLDPGVFEGLSNLH 145
Query: 180 SISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ LQNNQI + L S L + YL L N+L+ G++ L+T++L+ NKI++
Sbjct: 146 YLYLQNNQIAFVPRGLFSDLLSVRYLTLQRNRLSILGSGTFLGMRNLQTLNLANNKISR 204
>gi|443734386|gb|ELU18388.1| hypothetical protein CAPTEDRAFT_137734 [Capitella teleta]
Length = 725
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N+++ + + L +L L+L NN L+SL +L + +L + +N L +P ++++ +
Sbjct: 273 NSISVIPVEIGNLANLEELYLGNNCLESLPEELSLCCAMNILNLAKNHLCDVPVELKILT 332
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
Q+ SL +N I+ L + L +L+V N+D N ++ + D NL NL ++L N
Sbjct: 333 QMISLSLEDNDISELPSCVCALAELEVLNLDGNSLSSLPND-IANLENLQHVTLSRNSFG 391
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+ L+ L+ + L + HN + + L ++ L+ L+ ++S+N + +F +
Sbjct: 392 TFPMPLTQLSTIETLRMCHNSIAQ-LPEEFTNLQNLKLFEMSHNVMQEFPVQ 442
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
++++L + N + +L + L +L L LNNN + + G++G + L++L +E N +
Sbjct: 217 SLQELALSSNKIKALQGPEMAKLKNLKILGLNNNFIVEIPGEIGQMEMLEILGLEGNSIS 276
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P +I + L LY NN + SL L + + N+ N + V E + L +
Sbjct: 277 VIPVEIGNLANLEELYLGNNCLESLPEELSLCCAMNILNLAKNHLCDVPV-ELKILTQMI 335
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
S+SL++N I+ + S + L +L L L N L+ L +DI L+ L+ V LS N FG
Sbjct: 336 SLSLEDNDISELPSCVCALAELEVLNLDGNSLSS-LPNDIANLENLQHVTLSR---NSFG 391
Query: 240 T 240
T
Sbjct: 392 T 392
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+ L + N +TS+ L L +L L L +N+L + LG L KLQLL + N L
Sbjct: 33 TLNCLILASNEITSIPVELGNLINLEILILQSNKLHEIPSVLGVLQKLQLLDLSDNFLTE 92
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I +L L NNN++T + + LT+L+V ++ N I + L NL
Sbjct: 93 LPVEISGLRRLTQLVLNNNKLTEIAPQIIDLTQLEVLGLNGNNIHEI-PSAISKLQNLQV 151
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
++L+ N++ ++ + + L L +S N +T
Sbjct: 152 LALECNELDFLSVEVCHIHGLQKLQVSGNNIT 183
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N+L + L+ LT + L L +N + L + L++L++L ++ N L +LP+D
Sbjct: 314 LNLAKNHLCDVPVELKILTQMISLSLEDNDISELPSCVCALAELEVLNLDGNSLSSLPND 373
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L + + N + L L+ ++ M N I + +EF NL NL +
Sbjct: 374 IANLENLQHVTLSRNSFGTFPMPLTQLSTIETLRMCHNSIAQL-PEEFTNLQNLKLFEMS 432
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+N + L + L + L++N+L E + ++ L +L +D+S N
Sbjct: 433 HNVMQEFPVQLCFIPGLETVNLANNKL-ESVAVEVNKLNKLTELDISNN 480
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
TI L + N++ L L +L +++N ++ QL + L+ + + N+LE+
Sbjct: 402 TIETLRMCHNSIAQLPEEFTNLQNLKLFEMSHNVMQEFPVQLCFIPGLETVNLANNKLES 461
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR--RDEFQNLHNL 178
+ ++ ++L L +NN SL + + K++ + + ++ +EF
Sbjct: 462 VAVEVNKLNKLTELDISNNNFDSLPLEVCSIPKIEKLILSQEEGLRLKNIPEEFARCRA- 520
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + L N I + + L+ L L +SHN+LT L D+I ++LRT ++ N+I K
Sbjct: 521 EHLHLDYNDIRELPAFLAKSNNLTSLTMSHNRLTS-LPDEICKSQKLRTFHVNDNQITKL 579
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 26/157 (16%)
Query: 57 AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQ- 115
F P + +++ N L S+ + L L L ++NN SL ++ ++ K++ L++ Q
Sbjct: 444 CFIPGLETVNLANNKLESVAVEVNKLNKLTELDISNNNFDSLPLEVCSIPKIEKLILSQE 503
Query: 116 ------------------------NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N + LP+ + + L SL ++NR+TSL +
Sbjct: 504 EGLRLKNIPEEFARCRAEHLHLDYNDIRELPAFLAKSNNLTSLTMSHNRLTSLPDEICKS 563
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
KL+ F+++ NQIT + + F +H+L + L +N +
Sbjct: 564 QKLRTFHVNDNQITKL-PEMFGKMHHLTDLRLHDNPL 599
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 65/166 (39%), Gaps = 23/166 (13%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT + + LT L L LN N + + + L LQ+L +E N+L+ L ++
Sbjct: 111 NKLTEIAPQIIDLTQLEVLGLNGNNIHEIPSAISKLQNLQVLALECNELDFLSVEVCHIH 170
Query: 130 QLGSLYANNNRITSLDGLLRGLT-----------------------KLQVFNMDFNQITM 166
L L + N IT+L + L LQ + N+I
Sbjct: 171 GLQKLQVSGNNITNLPYGIENLVCLQQLLLDDNDLDFIPIQIFWLESLQELALSSNKIKA 230
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
++ E L NL + L NN I + + + L L L N ++
Sbjct: 231 LQGPEMAKLKNLKILGLNNNFIVEIPGEIGQMEMLEILGLEGNSIS 276
>gi|296208241|ref|XP_002750998.1| PREDICTED: leucine-rich repeat-containing protein 40 [Callithrix
jacchus]
Length = 602
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L ++NN+L+SL L L L +L I NQL +LPS I+ + L L ++N++
Sbjct: 82 TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLK 141
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L L+ + N++ + + F+ L +L+ + L NN++T++ +S S L+ L
Sbjct: 142 ILPEEITNLRNLKCLYLQHNELICI-SEGFEQLSSLEDLDLSNNRLTTVPASFSSLSSLV 200
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L LS NQL L +I +KRL+ +D + N
Sbjct: 201 RLNLSSNQLKS-LPAEINRMKRLKHLDCNSN 230
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ NN + + ++ P + L + N LTSL +++R L +L L +++N+LK L
Sbjct: 84 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKIL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++ N+L + + S L L +NNR+T++ L+ L N
Sbjct: 144 PEEITNLRNLKCLYLQHNELICISEGFEQLSSLEDLDLSNNRLTTVPASFSSLSSLVRLN 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ NQ+ + E + L + +N + ++ L+ + L LYL N+L
Sbjct: 204 LSSNQLKSLPA-EINRMKRLKHLDCNSNLLETIPPELAAMESLELLYLRRNKL 255
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + + L L N+N L+++ +L + L+LL + +N+L LP
Sbjct: 201 RLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAAMESLELLYLRRNKLRFLP- 259
Query: 124 DIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ S L L+ N+I L+ L+ L + V ++ N++ V DE LH+L+ +
Sbjct: 260 EFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLHSLERLD 318
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L NN I+S+ SL L L +L L N L
Sbjct: 319 LSNNDISSLPYSLGNL-HLKFLALEGNPL 346
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
++D+N F N+L S+ +L L KL L + N L +LP +++L +L ++ + NR
Sbjct: 451 VSDVNLSF---NKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRF 507
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L +L + L+ + NQ+ V + + + NL ++ LQNN + + L L
Sbjct: 508 KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNL 567
Query: 202 AYLYLSHN 209
L L N
Sbjct: 568 RTLLLDGN 575
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+ +++ FN L+S++ L L L +L L NN L SL ++ L +LQ + + N+ +
Sbjct: 450 TVSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRFKM 509
Query: 121 LPSDIQLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
LP + L ++ +NN++ S+D ++ LT L + N D QI E N
Sbjct: 510 LPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIP----PELGNCV 565
Query: 177 NLDSISLQNN 186
NL ++ L N
Sbjct: 566 NLRTLLLDGN 575
>gi|153864685|ref|ZP_01997501.1| Leucine Rich Repeat protein [Beggiatoa sp. SS]
gi|152145820|gb|EDN72499.1| Leucine Rich Repeat protein [Beggiatoa sp. SS]
Length = 155
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L L L+ L L+L+NN+L +L + L +L++L + +NQL LP + S
Sbjct: 4 NQLTTLPRQLVNLSQLRVLYLSNNQLTTLPLAICRLRQLKVLYLSENQLSHLPLQMAKLS 63
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY NNN + L ++ L++L++ ++ N+++ + + +L L+ + L NNQ+
Sbjct: 64 PLEGLYLNNNPFSVLPPVISKLSELRLLILNDNKLSTL-PPKIDDLSQLEIVYLNNNQLK 122
Query: 190 SMNSSLSGLTKLAYLYLSHNQ 210
++ S ++ LT+L LYL+ NQ
Sbjct: 123 ALPSEIAKLTRLKRLYLNDNQ 143
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N L+ L + L+ L L+LNNN L + LS+L+LL++ N+L L
Sbjct: 42 LKVLYLSENQLSHLPLQMAKLSPLEGLYLNNNPFSVLPPVISKLSELRLLILNDNKLSTL 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
P I SQL +Y NNN++ +L + LT+L+ ++ NQ
Sbjct: 102 PPKIDDLSQLEIVYLNNNQLKALPSEIAKLTRLKRLYLNDNQ 143
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
++ N+L +L QL LS+L++L + NQL LP I QL LY + N+++ L +
Sbjct: 1 MSGNQLTTLPRQLVNLSQLRVLYLSNNQLTTLPLAICRLRQLKVLYLSENQLSHLPLQMA 60
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L+ L+ ++ N + V L L + L +N+++++ + L++L +YL++N
Sbjct: 61 KLSPLEGLYLNNNPFS-VLPPVISKLSELRLLILNDNKLSTLPPKIDDLSQLEIVYLNNN 119
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINK 237
QL + L +I L RL+ + L+ N+ +K
Sbjct: 120 QL-KALPSEIAKLTRLKRLYLNDNQTDK 146
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 52 HIHENAF---PPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
+++ N F PP I KL + N L++L + L+ L ++LNNN+LK+L ++
Sbjct: 69 YLNNNPFSVLPPVISKLSELRLLILNDNKLSTLPPKIDDLSQLEIVYLNNNQLKALPSEI 128
Query: 103 GTLSKLQLLVIEQNQLEALPSDI 125
L++L+ L + NQ + P I
Sbjct: 129 AKLTRLKRLYLNDNQTDKDPISI 151
>gi|167524890|ref|XP_001746780.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774560|gb|EDQ88187.1| predicted protein [Monosiga brevicollis MX1]
Length = 411
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L+ S L L L L+NN L +L +G L+ L L + N+L LP ++ +
Sbjct: 70 NTLTTLSESFFTLVHLTELNLSNNHLSALPKHIGQLTNLVKLDLSSNRLTHLPEELTQLT 129
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L +L +NNR+ ++ + L +LQ + N IT + D L NL+ + L N +
Sbjct: 130 DLETLNVSNNRLATIPAPVLALEQLQKLYIGSNAITALPAD-IARLKNLEVLYLGGNLLR 188
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++N +L L++L LYL N+L + L I L RLRT++L N++
Sbjct: 189 TVNDNLCQLSRLTLLYLGGNRLRK-LSPKIANLHRLRTLNLHDNQL 233
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Query: 49 NITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
N+++ H +A P I KL + N LT L L LTDL L ++NNRL ++ +
Sbjct: 89 NLSNNHLSALPKHIGQLTNLVKLDLSSNRLTHLPEELTQLTDLETLNVSNNRLATIPAPV 148
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
L +LQ L I N + ALP+DI L LY N + +++ L L++L + + N
Sbjct: 149 LALEQLQKLYIGSNAITALPADIARLKNLEVLYLGGNLLRTVNDNLCQLSRLTLLYLGGN 208
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
++ + + NLH L +++L +NQ+ + ++ + L L L +N L ++D+R
Sbjct: 209 RLRKL-SPKIANLHRLRTLNLHDNQLQFLPPAIVDMRSLRQLSLRNNPLVTDFVEDVRP- 266
Query: 223 KRLRTVDLSYNKINKFGTR 241
+ L ++L +I + G +
Sbjct: 267 EPLSLLELCAREIKRNGIK 285
>gi|421088183|ref|ZP_15549011.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410003168|gb|EKO53614.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 305
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+L++G N LT+L + L +L LNNN+L +L ++G L LQ L + NQL
Sbjct: 91 SLRELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTT 150
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP ++ L L ++N++T+L L L++ N+ N +T++ +E L L S
Sbjct: 151 LPKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTIL-PNEIGQLKKLLS 209
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L NQ+T++ + L L LYL NQL + L +I LK LR + L + ++
Sbjct: 210 LNLTYNQLTTLPKEIGQLQSLRELYLGDNQL-KTLPKEIGQLKNLRELLLRHKQL 263
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT L + L +L L L NN+ +L ++G L L+ L + NQL
Sbjct: 43 PLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQL 102
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP ++ L NNN++T+L + L LQ ++ NQ+T + + E L NL
Sbjct: 103 TTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPK-EVGQLKNL 161
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SL +N++T++ L L L LS N LT L ++I LK+L +++L+YN++
Sbjct: 162 YDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLT-ILPNEIGQLKKLLSLNLTYNQL 217
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ D+ L L+ +L L ++G L LQ L + NQ LP++I L L
Sbjct: 36 LTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLREL 95
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
Y +N++T+L + L LQVF ++ NQ+T + E L NL + L NNQ+T++
Sbjct: 96 YLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPA-EIGKLKNLQHLDLWNNQLTTLPKE 154
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L L L L N+LT L + LK LR ++LS N
Sbjct: 155 VGQLKNLYDLSLHDNKLTT-LPKETGQLKNLRMLNLSKN 192
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L L +L L L+ N L L ++G L KL L + NQL LP +I
Sbjct: 169 NKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQ 228
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY +N++ +L E L NL + L++ Q+T
Sbjct: 229 SLRELYLGDNQLKTLP------------------------KEIGQLKNLRELLLRHKQLT 264
Query: 190 SMNSSLSGLTKLAYLYLSHN 209
++ + L KL +L L N
Sbjct: 265 TVPKEIGQLKKLRWLLLDAN 284
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LT L N + L L L L N+L +L ++G L L+ L + NQL+ L
Sbjct: 184 LRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTL 243
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
P +I L L + ++T++ + L KL+ +D N I
Sbjct: 244 PKEIGQLKNLRELLLRHKQLTTVPKEIGQLKKLRWLLLDANPI 286
>gi|350420155|ref|XP_003492417.1| PREDICTED: slit homolog 3 protein-like [Bombus impatiens]
Length = 343
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 7/181 (3%)
Query: 32 DDLKGTPALITLLLVNNN-ITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNW 87
D G + +T L +N+N IT I AF P + +LH+ N LTS+ LRGL L+
Sbjct: 162 DSFSGLSSSLTFLWLNDNKITSIETGAFSQMPELTRLHLENNKLTSIQPGVLRGLHKLDG 221
Query: 88 LFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD 145
LF+ N L S+ + L L++L + NQ+ ++ S SQL L N++T +D
Sbjct: 222 LFVEENELNSVSKNDFKGLIGLRILNLHHNQIASIESGAFSDLSQLEQLDLRKNQLTRVD 281
Query: 146 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
G+ GL+ L+ ++ N+I +V+ F L L ++ L NN++T ++ GLT L L
Sbjct: 282 YGVFNGLSNLKRLDLSDNKIAVVQSGAFAGLSALKTLILANNKLTDVDRKDFGLTSLTIL 341
Query: 205 Y 205
Y
Sbjct: 342 Y 342
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 115/211 (54%), Gaps = 8/211 (3%)
Query: 42 TLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTD-LNWLFLNNNRLKS 97
+L L+ N I+ I ++ F + L++G N++ S+N +S GL+ L +L+LN+N++ S
Sbjct: 124 SLSLIFNKISEIPKDTFADLSNLMWLYLGHNDIESVNKDSFSGLSSSLTFLWLNDNKITS 183
Query: 98 LE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKL 154
+E G + +L L +E N+L ++ P ++ +L L+ N + S+ +GL L
Sbjct: 184 IETGAFSQMPELTRLHLENNKLTSIQPGVLRGLHKLDGLFVEENELNSVSKNDFKGLIGL 243
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTE 213
++ N+ NQI + F +L L+ + L+ NQ+T ++ + +GL+ L L LS N++
Sbjct: 244 RILNLHHNQIASIESGAFSDLSQLEQLDLRKNQLTRVDYGVFNGLSNLKRLDLSDNKIAV 303
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
GL L+T+ L+ NK+ ++ G
Sbjct: 304 VQSGAFAGLSALKTLILANNKLTDVDRKDFG 334
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 49 NITHIHENAFPP-TIRKLHVGFNNLTSL--NNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
N+ I EN F T KL G N S S +GL L L L++N + L
Sbjct: 60 NLLAIRENTFKNLTTTKLSFGLGNKISAVKKKSFKGLEKLERLDLDSNVISLSPNLFSEL 119
Query: 106 SKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLD-----GLLRGLTKLQVFNM 159
+L L + N++ +P D S L LY +N I S++ GL LT L +
Sbjct: 120 KQLHSLSLIFNKISEIPKDTFADLSNLMWLYLGHNDIESVNKDSFSGLSSSLTFLW---L 176
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDD 218
+ N+IT + F + L + L+NN++TS+ L GL KL L++ N+L +D
Sbjct: 177 NDNKITSIETGAFSQMPELTRLHLENNKLTSIQPGVLRGLHKLDGLFVEENELNSVSKND 236
Query: 219 IRGLKRLRTVDLSYNKI 235
+GL LR ++L +N+I
Sbjct: 237 FKGLIGLRILNLHHNQI 253
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRIT 142
DLN L + N K+L T +KL + N++ A+ + +L L ++N I+
Sbjct: 58 DLNLLAIRENTFKNL-----TTTKLSFGL--GNKISAVKKKSFKGLEKLERLDLDSNVIS 110
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGL-TK 200
L L +L ++ FN+I+ + +D F +L NL + L +N I S+N S SGL +
Sbjct: 111 LSPNLFSELKQLHSLSLIFNKISEIPKDTFADLSNLMWLYLGHNDIESVNKDSFSGLSSS 170
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +L+L+ N++T + L + L NK+
Sbjct: 171 LTFLWLNDNKITSIETGAFSQMPELTRLHLENNKL 205
>gi|242046482|ref|XP_002399506.1| lumican, putative [Ixodes scapularis]
gi|215497547|gb|EEC07041.1| lumican, putative [Ixodes scapularis]
Length = 546
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + +++T L +S+R L L +L N+L +L G++G+L LQ L + +N L +LP
Sbjct: 66 RLDLSKSSITVLPSSVRELGHLVEFYLYGNKLATLPGEVGSLVNLQTLALSENSLTSLPD 125
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ QL L +N++ + ++ LT L + FN+I V D NL NL +SL
Sbjct: 126 TLAHLRQLRVLDLRHNKLNEIPEVVYRLTSLTTLFLRFNRIREV-GDNIANLTNLTMLSL 184
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ N+I + + + LT+L S+NQL + L +I +L T+D+ +N++
Sbjct: 185 RENKIRELPAGIGKLTQLITFDASNNQL-KHLPTEIGNCVQLSTLDVQHNEL 235
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N L+ + + ++ L L L L+NN L+ L +G+L+KL++L +E+N+L+ALP+
Sbjct: 370 ELNLGTNQLSKVPDDIQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDLEENRLDALPN 429
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I + +L L A +N+++SL + L+ L + N + + +E L +L+S+ +
Sbjct: 430 EIGMLRELQKLVAQSNQLSSLPRAIGHLSNLTYLGVGENNLNFI-PEEIGTLDSLESLYI 488
Query: 184 QNN 186
+N
Sbjct: 489 NDN 491
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
R LT LN + +N+L SL +GT + + L + NQL +P DIQ L L +NN
Sbjct: 343 RNLTKLN---MKDNQLTSLPLDMGTWTNMVELNLGTNQLSKVPDDIQYLQSLEVLTLSNN 399
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
+ L + L KL+V +++ N++ + +E L L + Q+NQ++S+ ++ L+
Sbjct: 400 LLRRLPPTIGSLAKLRVLDLEENRLDAL-PNEIGMLRELQKLVAQSNQLSSLPRAIGHLS 458
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
L YL + N L F+ ++I L L ++
Sbjct: 459 NLTYLGVGENNLN-FIPEEIGTLDSLESL 486
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L N++T + + A +R L + N L + + LT L LFL NR++ +
Sbjct: 110 LQTLALSENSLTSLPDTLAHLRQLRVLDLRHNKLNEIPEVVYRLTSLTTLFLRFNRIREV 169
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ L+ L +L + +N++ LP+ I +QL + A+NN++ L + +L +
Sbjct: 170 GDNIANLTNLTMLSLRENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCVQLSTLD 229
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQN--NQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ N++ + + NL L + L+ NQ+TS+ SLS + + N +++
Sbjct: 230 VQHNELIDI-PETIGNLKVLTRLGLRQVYNQLTSVPKSLSNCVNMTDFNVESNLVSQL 286
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 16 NLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTI------RKLHVGF 69
N+++L T DD++ +L L L NN + + PPTI R L +
Sbjct: 367 NMVELNLGTNQLSKVPDDIQYLQSLEVLTLSNNLLRRL-----PPTIGSLAKLRVLDLEE 421
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L N + L +L L +N+L SL +G LS L L + +N L +P +I
Sbjct: 422 NRLDALPNEIGMLRELQKLVAQSNQLSSLPRAIGHLSNLTYLGVGENNLNFIPEEIGTLD 481
Query: 130 QLGSLYANNNR-ITSLDGLLRGLTKLQVFNMD 160
L SLY N+N + SL L + LQ+ +++
Sbjct: 482 SLESLYINDNPNLHSLPFELALCSNLQIMSIE 513
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 41/217 (18%)
Query: 62 IRKLHVGFNNLTSL------NNSLRGL-------TDLNWLFLNNNRLKSLEGQLGTLSKL 108
IR+L G LT L NN L+ L L+ L + +N L + +G L L
Sbjct: 189 IRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCVQLSTLDVQHNELIDIPETIGNLKVL 248
Query: 109 QLLVIEQ--NQLEALPSDIQ-------------LFSQLGS------------LYANNNRI 141
L + Q NQL ++P + L SQL + NN
Sbjct: 249 TRLGLRQVYNQLTSVPKSLSNCVNMTDFNVESNLVSQLPEGLLSSFSNLSSLTLSRNNFT 308
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
+ G + NM+ NQI + F NL +++++NQ+TS+ + T +
Sbjct: 309 SYPVGGPSQFCSVYAINMEHNQINKIPFGIFSRARNLTKLNMKDNQLTSLPLDMGTWTNM 368
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L NQL++ + DDI+ L+ L + LS N + +
Sbjct: 369 VELNLGTNQLSK-VPDDIQYLQSLEVLTLSNNLLRRL 404
>gi|255074191|ref|XP_002500770.1| predicted protein [Micromonas sp. RCC299]
gi|226516033|gb|ACO62028.1| predicted protein [Micromonas sp. RCC299]
Length = 256
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Query: 47 NNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
+N +T + E ++R L + N LTS+ + LT L LFL +N L + ++G L
Sbjct: 42 HNELTRVPAEIGLLTSLRALSLSSNKLTSVPVEIGQLTSLTALFLGDNLLTRVPAEVGQL 101
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ L+ L + N+L ++ ++I + L L NN++TSL + LT L + NQ+T
Sbjct: 102 ASLEGLFLGDNRLTSVLAEIGQLTSLTELSLGNNQLTSLPAEIGRLTSLTALLLYDNQLT 161
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
V E L +L +SL NQ+TS+ + + LT L LYL NQLT
Sbjct: 162 SVPA-EIGQLTSLVKLSLTENQLTSLPAEIGQLTSLTELYLYGNQLTSV 209
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 9/191 (4%)
Query: 32 DDLKGTPALITLL-------LVNNNITHIH-ENAFPPTIRKLHVGFNNLTSLNNSLRGLT 83
++L PA I LL L +N +T + E ++ L +G N LT + + L
Sbjct: 43 NELTRVPAEIGLLTSLRALSLSSNKLTSVPVEIGQLTSLTALFLGDNLLTRVPAEVGQLA 102
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L LFL +NRL S+ ++G L+ L L + NQL +LP++I + L +L +N++TS
Sbjct: 103 SLEGLFLGDNRLTSVLAEIGQLTSLTELSLGNNQLTSLPAEIGRLTSLTALLLYDNQLTS 162
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ + LT L ++ NQ+T + E L +L + L NQ+TS+ + + LT L
Sbjct: 163 VPAEIGQLTSLVKLSLTENQLTSLPA-EIGQLTSLTELYLYGNQLTSVPAEIGQLTSLVR 221
Query: 204 LYLSHNQLTEF 214
LYL N+LT
Sbjct: 222 LYLGDNRLTSV 232
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R H+ N LTS+ + LT L L LN+N L + ++G L+ L+ L + N+L ++P
Sbjct: 13 RAAHLAENQLTSVPAEIGHLTSLERLELNHNELTRVPAEIGLLTSLRALSLSSNKLTSVP 72
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+I + L +L+ +N +T + + L L+ + N++T V E L +L +S
Sbjct: 73 VEIGQLTSLTALFLGDNLLTRVPAEVGQLASLEGLFLGDNRLTSVLA-EIGQLTSLTELS 131
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NNQ+TS+ + + LT L L L NQLT + +I L L + L+ N++
Sbjct: 132 LGNNQLTSLPAEIGRLTSLTALLLYDNQLTS-VPAEIGQLTSLVKLSLTENQLTSL 186
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L LLL +N +T + E ++ KL + N LTSL + LT L L+L N+L S
Sbjct: 149 SLTALLLYDNQLTSVPAEIGQLTSLVKLSLTENQLTSLPAEIGQLTSLTELYLYGNQLTS 208
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
+ ++G L+ L L + N+L ++P+ I+ G +N +T
Sbjct: 209 VPAEIGQLTSLVRLYLGDNRLTSVPAAIRELRAAGCNVRMDNGVT 253
>gi|328876131|gb|EGG24494.1| leucine-rich repeat-containing protein [Dictyostelium fasciculatum]
Length = 1187
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L S+ + L ++ L L+ N+LK + +GTL L+ L + NQL LP ++ ++L
Sbjct: 411 LKSIPVDVYSLMEIRDLDLSANQLKKVSKSIGTLIHLKRLRLNHNQLTVLPKELYSLTKL 470
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE-FQNLHNLDSISLQNNQITS 190
+LY NNN I ++ +R LT L+V ++ FNQIT + F + +L + L+ NQ++S
Sbjct: 471 TTLYLNNNNIKAIPKDIRNLTSLKVLDLSFNQITDIPSSTNFNQMSSLVELRLRYNQLSS 530
Query: 191 MNSSLSGLTKLAYLYLSHNQL 211
+ S++ T+L L+L N+L
Sbjct: 531 LPSNMLECTQLQVLWLEGNRL 551
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L L+N LKS+ + +L +++ L + NQL+ + I L L N+N++T L
Sbjct: 404 LSLSNCWLKSIPVDVYSLMEIRDLDLSANQLKKVSKSIGTLIHLKRLRLNHNQLTVLPKE 463
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS--LSGLTKLAYLY 205
L LTKL ++ N I + +D +NL +L + L NQIT + SS + ++ L L
Sbjct: 464 LYSLTKLTTLYLNNNNIKAIPKD-IRNLTSLKVLDLSFNQITDIPSSTNFNQMSSLVELR 522
Query: 206 LSHNQLTEF 214
L +NQL+
Sbjct: 523 LRYNQLSSL 531
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 25/113 (22%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL---------- 111
+++L + N LT L L LT L L+LNNN +K++ + L+ L++L
Sbjct: 447 LKRLRLNHNQLTVLPKELYSLTKLTTLYLNNNNIKAIPKDIRNLTSLKVLDLSFNQITDI 506
Query: 112 ---------------VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
+ NQL +LPS++ +QL L+ NR+ +L+
Sbjct: 507 PSSTNFNQMSSLVELRLRYNQLSSLPSNMLECTQLQVLWLEGNRLPLQKSMLK 559
>gi|421090532|ref|ZP_15551324.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000746|gb|EKO51374.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 288
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N +T+L + + L +L L LN NRL+++ ++G L L+ L I N+L+ L
Sbjct: 75 LKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIGLNKLKTL 134
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY + N++ L + L KLQ ++ N++T + + E +NL L I
Sbjct: 135 PKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELTKLPQ-EIKNLEGLIEI 193
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +NQ T++ + L L L L NQL L +I LK L+ + L N++ K
Sbjct: 194 YLYDNQFTTLPKEIGNLKNLRNLVLGRNQLIS-LPSEIGNLKNLKELYLEENQLTKL 249
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L +G N L +L + L +L L+L+ N+LK L ++ L KLQ + + N+L L
Sbjct: 121 LKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELTKL 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +Y +N+ T+L + L L+ + NQ+ + E NL NL +
Sbjct: 181 PQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLP-SEIGNLKNLKEL 239
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
L+ NQ+T + ++ L KL+ L L NQ F ++ +KRL
Sbjct: 240 YLEENQLTKLPKQIAALKKLSRLSLEGNQ---FPSEEKERIKRL 280
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E N L+ LP +I L L N N IT+L + L LQV +++ N++ + + E
Sbjct: 58 EDNPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPK-EIG 116
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
NL NL +S+ N++ ++ + L L LYLS NQL + L +I LK+L+ + LS N
Sbjct: 117 NLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQL-KVLPQEIWNLKKLQRMHLSTN 175
Query: 234 KINKF 238
++ K
Sbjct: 176 ELTKL 180
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L +L + L +L L LN N + +L ++G L LQ+L + N+LE +P +I
Sbjct: 60 NPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L N++ +L + L L+ + NQ+ ++ + E NL L + L N++T
Sbjct: 120 NLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQ-EIWNLKKLQRMHLSTNELT 178
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L +YL NQ T L +I LK LR + L N++
Sbjct: 179 KLPQEIKNLEGLIEIYLYDNQFTT-LPKEIGNLKNLRNLVLGRNQL 223
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
+N LK+L ++G L L+ L + N++ LPS+I L L N NR+ ++ + L
Sbjct: 59 DNPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNL 118
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L+ ++ N++ + + E NL NL + L NQ+ + + L KL ++LS N+L
Sbjct: 119 KNLKELSIGLNKLKTLPK-EIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNEL 177
Query: 212 TEFLLDDIRGLKRLRTVDLSYNK 234
T+ L +I+ L+ L + L N+
Sbjct: 178 TK-LPQEIKNLEGLIEIYLYDNQ 199
>gi|124010200|ref|ZP_01694856.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123983744|gb|EAY24171.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 356
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL VG N L L + L +L L LN N+L L ++G+L KL LL + N+LE LP
Sbjct: 145 KLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPK 204
Query: 124 -----------------------DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
+IQ + LG LY NN++T+L + GL KL+ +
Sbjct: 205 SIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQ 264
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N++ + + E L NL ++L+NN++ + + LT L L +N+L L ++I
Sbjct: 265 DNRLRKLPK-EIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRN-LPEEIG 322
Query: 221 GLKRLRTVDLSYNKINKFGTR 241
L L+ + L +N+ +K R
Sbjct: 323 QLANLQKLYLEHNRFSKAKQR 343
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ LH+G+NNL L + ++ LT+L WL+L NN+L +L +G L KL+ + ++ N+L L
Sbjct: 212 LESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKL 271
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NNR+ L +E L +L
Sbjct: 272 PKEIGQLGNLQELNLKNNRLRRLP------------------------EEIDQLTSLREF 307
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
L+NN++ ++ + L L LYL HN+ ++ IR
Sbjct: 308 DLENNRLRNLPEEIGQLANLQKLYLEHNRFSKAKQRKIR 346
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L SL + LT+L L + N+L L ++G L L L + NQL LP +I +L
Sbjct: 130 LISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKL 189
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY N++ L + L +L+ ++ +N + + DE Q L NL + L+NNQ+T++
Sbjct: 190 ALLYLGGNKLECLPKSIGNLRELESLHLGYNNLKGL-PDEIQQLTNLGWLYLENNQLTAL 248
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + GL KL + L N+L + L +I L L+ ++L N++ +
Sbjct: 249 PAGIGGLKKLKKMGLQDNRLRK-LPKEIGQLGNLQELNLKNNRLRRL 294
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
+ LTSL S+ L L L LN +L SL ++G L+ L L + NQL LP +I
Sbjct: 105 SKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLK 164
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L SL N N++ L + L KL + + N++ + + NL L+S+ L N +
Sbjct: 165 NLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKS-IGNLRELESLHLGYNNLK 223
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + LT L +LYL +NQLT L I GLK+L+ + L N++ K
Sbjct: 224 GLPDEIQQLTNLGWLYLENNQLTA-LPAGIGGLKKLKKMGLQDNRLRKL 271
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
+ L + L N+ L L ++ L+ L IE QL+ LP +I L L + +++T
Sbjct: 49 SGLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLT 108
Query: 143 SLDGLL------------RG-----------LTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
SL + RG LT L + NQ+ + + E L NL
Sbjct: 109 SLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPK-EIGQLKNLI 167
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
S++L NQ+ + + L KLA LYL N+L E L I L+ L ++ L YN
Sbjct: 168 SLTLNGNQLVELPQEIGSLGKLALLYLGGNKL-ECLPKSIGNLRELESLHLGYN 220
>gi|185132573|ref|NP_001117884.1| toll-like receptor 22 precursor [Oncorhynchus mykiss]
gi|47678174|emb|CAF31506.1| Toll-like-receptor TLR22a1 [Oncorhynchus mykiss]
Length = 973
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%), Gaps = 14/218 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLN 86
L+ + L+ + + L NNNI + E +F + L +G N L+S+ ++ R ++ L
Sbjct: 337 LSEEFLQSCKQVTEVDLENNNIIQLSEVSFRSMEQLSTLRLGHNRLSSVPDATRNISTLM 396
Query: 87 WLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL 144
L L+ N + L L+ L L + NQ+ LP + Q L L +N+I +L
Sbjct: 397 LLDLSFNIIHKLGCSDFSNLTGLTQLFLFHNQISNLPGCVFQDLKDLRILKLGSNKILTL 456
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLA 202
D + GL KL+ +M +N+++ + + +F+ L +L ++ L +NQI S+ + + GL L
Sbjct: 457 NDDFMSGLHKLEFLSMSYNKLSSISKGDFKGLASLKTLLLFDNQIASLEDGAFEGLVNLT 516
Query: 203 YLYLSHNQLTEFLLDDIR-----GLKRLRTVDLSYNKI 235
L L N++T+ DIR GL LRT+D+S N I
Sbjct: 517 ELRLQSNKITQI---DIRNTVLTGLPHLRTLDISCNYI 551
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGF--NNLTSLNN-SLRGLTDLNWLFLNNNR 94
P L L L +NNI+ + E + V NN+ L+ S R + L+ L L +NR
Sbjct: 322 PTLSLLRLHHNNISALSEEFLQSCKQVTEVDLENNNIIQLSEVSFRSMEQLSTLRLGHNR 381
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDG-LLRGLT 152
L S+ +S L LL + N + L SD + L L+ +N+I++L G + + L
Sbjct: 382 LSSVPDATRNISTLMLLDLSFNIIHKLGCSDFSNLTGLTQLFLFHNQISNLPGCVFQDLK 441
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQL 211
L++ + N+I + D LH L+ +S+ N+++S++ GL L L L NQ+
Sbjct: 442 DLRILKLGSNKILTLNDDFMSGLHKLEFLSMSYNKLSSISKGDFKGLASLKTLLLFDNQI 501
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
GL L + L NKI + RN
Sbjct: 502 ASLEDGAFEGLVNLTELRLQSNKITQIDIRN 532
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN-NRITSLDGL 147
FLNN ++ G L +++L +N +E +P +I + + NN ++I LD
Sbjct: 40 FLNNCTIR---GNLSDNFNMKVLCYNRN-IEVMPINIPCKVSVLDVAMNNISKIRRLD-- 93
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYL 206
+GL+ L++ NM NQI+ V D L L ++L +N++T+++ L GL L+ L+L
Sbjct: 94 FKGLSNLKILNMSRNQISQVDNDALLPLKALRELNLAHNRLTTLSDHLFQGLDNLSLLHL 153
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+N + + L L+TV+L+ N ++
Sbjct: 154 DNNLIATISSSSFQPLSSLKTVNLTKNNLH 183
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 105 LSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFN 162
LS L++L + +NQ+ + +D L L L +NR+T+L D L +GL L + ++D N
Sbjct: 97 LSNLKILNMSRNQISQVDNDALLPLKALRELNLAHNRLTTLSDHLFQGLDNLSLLHLDNN 156
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNS--SLSGLTKLAYLYLSHNQLTEFLLDDIR 220
I + FQ L +L +++L N + +M + L L LY+ N+ T F +I
Sbjct: 157 LIATISSSSFQPLSSLKTVNLTKNNLHNMKEVQPIVQLPHLQELYIGSNRFTSFQSQEIS 216
Query: 221 GLK-RLRTVDLSYNKINKF 238
+ LR +DLS N + F
Sbjct: 217 NMSIELRLLDLSRNPLGVF 235
>gi|260822823|ref|XP_002606801.1| hypothetical protein BRAFLDRAFT_225992 [Branchiostoma floridae]
gi|229292145|gb|EEN62811.1| hypothetical protein BRAFLDRAFT_225992 [Branchiostoma floridae]
Length = 418
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTI--RKLHVGFNNLTSLNNSLRGLTDLN 86
+ S DL L TL++ N I+ + AF + +LH+ N LTS+ ++ + L
Sbjct: 30 IYSSDLSRYKGLTTLMVFRNQISIVQPGAFSKFVHLERLHLNCNQLTSIKSTFSNIPKLK 89
Query: 87 WLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL 144
L+L++N + S+ G L +L+ L + +N L + P +L LY + N +T +
Sbjct: 90 ELYLSHNHISSVPPGAFSNLPRLESLSLTENDLANIQPGVFSNLPKLERLYLSRNNLTKI 149
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLA 202
L +L +++ N+IT + D F + L + NQIT + S + S + KL
Sbjct: 150 HPDTFSNLPQLLALHLNSNRITNIDSDMFSKIPTLQRLEFDYNQITGIRSGTFSSVPKLR 209
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +++NQ+T +L+ +DL YN I +
Sbjct: 210 LLMIAYNQITNISPGAFSHRHQLQWLDLKYNHITEI 245
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 78 SLRGL--------TDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQL 127
S RGL T + L L N + S+ L L L++ +NQ+ + P
Sbjct: 2 SARGLSNVPQDLPTSITSLNLARNAITSIYSSDLSRYKGLTTLMVFRNQISIVQPGAFSK 61
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
F L L+ N N++TS+ + KL+ + N I+ V F NL L+S+SL N
Sbjct: 62 FVHLERLHLNCNQLTSIKSTFSNIPKLKELYLSHNHISSVPPGAFSNLPRLESLSLTEND 121
Query: 188 ITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++ + S L KL LYLS N LT+ D L +L + L+ N+I
Sbjct: 122 LANIQPGVFSNLPKLERLYLSRNNLTKIHPDTFSNLPQLLALHLNSNRI 170
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNR 94
P L L L NN+T IH + F P + LH+ N +T++++ + + L L + N+
Sbjct: 134 PKLERLYLSRNNLTKIHPDTFSNLPQLLALHLNSNRITNIDSDMFSKIPTLQRLEFDYNQ 193
Query: 95 LKSLE-GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-GLLRGL 151
+ + G ++ KL+LL+I NQ+ + P QL L N IT + G L L
Sbjct: 194 ITGIRSGTFSSVPKLRLLMIAYNQITNISPGAFSHRHQLQWLDLKYNHITEIQPGTLSNL 253
Query: 152 TKLQVFNMDFNQITMVRRDEFQNL 175
+L ++ NQ+T ++ FQNL
Sbjct: 254 ARLYNSYLNSNQMTTIQPGTFQNL 277
>gi|444722724|gb|ELW63401.1| Protein scribble like protein [Tupaia chinensis]
Length = 1566
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 92 LALNDVSLQALPG-------DVGSLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 144
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L L L+L+ N++ +L +LG L +L L + +N+LE LP ++ L
Sbjct: 145 LEVLPDTLGALPSLRELWLDRNQMSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLL 204
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 205 TDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 263
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 264 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 306
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHENA-FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L++L
Sbjct: 43 LVELDVSRNDIPEIPESIRFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQAL 102
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G+L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 103 PGDVGSLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPSLRELW 162
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L D
Sbjct: 163 LDRNQMSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQN-LLQRLPDG 220
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 221 IGQLKQLSILKVDQNRL 237
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 230 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 289
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ +L L +L V ++ N++ + F H NL ++ L
Sbjct: 290 IGGCVALSVLSLRDNRLAALPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 346
Query: 184 QNNQITSM 191
NQ M
Sbjct: 347 AENQAQPM 354
>gi|260788686|ref|XP_002589380.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
gi|229274557|gb|EEN45391.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
Length = 670
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 31/235 (13%)
Query: 34 LKGTPALI--TLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDL 85
LK P I L LVN + ++ + + FPP + R+L++ N LT + + + L +L
Sbjct: 117 LKKLPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNL 176
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
L + NN L + + L KL+ L I NQL +PS + L L NN +++
Sbjct: 177 EKLSVYNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFP 236
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
+ L KL+ + NQ+T V +L NL+ +S+ NN +++ + L KL LY
Sbjct: 237 PGVEKLQKLRELYIHDNQLTEVPSG-VCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELY 295
Query: 206 LSHNQLTEF----------------------LLDDIRGLKRLRTVDLSYNKINKF 238
+ HNQLTE L D++ L R++T+ + + ++F
Sbjct: 296 IHHNQLTEVPSGVCSLPNLEVLSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEF 350
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 38 PALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NNN++ FPP + R+L++ N LT + + + L +L L +
Sbjct: 174 PNLEKLSVYNNNLS-----TFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVY 228
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
NN L + + L KL+ L I NQL +PS + L L NN +++ + L
Sbjct: 229 NNNLSTFPPGVEKLQKLRELYIHDNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKL 288
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
KL+ + NQ+T V +L NL+ +S+ NN I + ++ LT++ L + Q
Sbjct: 289 QKLRELYIHHNQLTEVPSG-VCSLPNLEVLSVGNNPIRCLPDEVTRLTRMKTLSVPSCQF 347
Query: 212 TEFLLDDIRGLKRLRTVDLSY 232
EF R + +L+T+++ Y
Sbjct: 348 DEF----PRQVLQLKTLEMLY 364
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT----------------- 104
+++L+V NNL+ L + L L +L WL++ +N+LK L ++ +
Sbjct: 84 LKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNNLSTF 143
Query: 105 ------LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
L KL+ L I NQL +PS + L L NN +++ + L KL+
Sbjct: 144 PPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELY 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
+ NQ+T V +L NL+ +S+ NN +++ + L KL LY+ NQLTE
Sbjct: 204 IYGNQLTEVPSG-VCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHDNQLTE 257
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LTS+ + +TDL +L ++NN+L S+ +G L L L + N + +LP I L
Sbjct: 25 LTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLDADGNMMTSLPQAISSLQGL 84
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY ++N ++ L L L L+ + N++ + F L NL + NN +++
Sbjct: 85 KQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCL-NLVNFDASNNNLSTF 143
Query: 192 NSSLSGLTKLAYLYLSHNQLTE 213
+ L KL LY+ NQLTE
Sbjct: 144 PPGVEKLQKLRELYIYGNQLTE 165
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 4/197 (2%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L + N +T + P + KL V NNL++ + L L L++++N+L +
Sbjct: 199 LRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHDNQLTEV 258
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ +L L+ L + N L P ++ +L LY ++N++T + + L L+V +
Sbjct: 259 PSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQLTEVPSGVCSLPNLEVLS 318
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--LL 216
+ N I + DE L + ++S+ + Q + L L LY N +F +
Sbjct: 319 VGNNPIRCL-PDEVTRLTRMKTLSVPSCQFDEFPRQVLQLKTLEMLYAGQNGGRKFDMVP 377
Query: 217 DDIRGLKRLRTVDLSYN 233
D++ L+ L + L N
Sbjct: 378 DEVGNLQHLWFLALENN 394
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 38 PALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NNN++ FPP + R+L++ N LT + + + L +L L +
Sbjct: 266 PNLEKLSVYNNNLS-----TFPPGVEKLQKLRELYIHHNQLTEVPSGVCSLPNLEVLSVG 320
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
NN ++ L ++ L++++ L + Q + P + L LYA N D + +
Sbjct: 321 NNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPRQVLQLKTLEMLYAGQNGGRKFDMVPDEV 380
Query: 152 TKLQ--VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
LQ F N + +LHNL + L NN+ + L L + L + +N
Sbjct: 381 GNLQHLWFLALENNLLRTLPSTMSHLHNLRQVQLWNNKFDTFPEVLCELPAMEKLDIKNN 440
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKI 235
+T R +LR +D+S N +
Sbjct: 441 NITRIPTALHRA-DKLRDLDVSGNPL 465
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L L+N L S+ ++ ++ L+ L + N+L ++P I L L A+ N +TSL
Sbjct: 18 LDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLDADGNMMTSLPQA 77
Query: 148 ---LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
L+GL +L V + + +++ D ++L NL+ + +++N++ + + + L
Sbjct: 78 ISSLQGLKQLYVHSNNLSELP----DGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNF 133
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
S+N L+ F + L++LR + + N++ + +
Sbjct: 134 DASNNNLSTF-PPGVEKLQKLRELYIYGNQLTEVPS 168
>gi|398341179|ref|ZP_10525882.1| hypothetical protein LkirsB1_18573 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 285
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L N+L SL ++G L KL++L + NQL +LP +++
Sbjct: 24 MGLHELDSLPRVIGLFQNLEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLTSLPKEME 83
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L L ++N TS R L KL++ N+ NQ+T + + E + L NL+ + L N
Sbjct: 84 LLQNLEILNLDDNEFTSFPKETRQLQKLRILNLAGNQLTSLPK-EMELLQNLERLDLAGN 142
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + + L L L LSHNQ T F +IR + L+ + LS N++
Sbjct: 143 RFKILPKEMELLQNLEALNLSHNQFTSF-PKEIRRQQNLKWLYLSRNQL 190
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ N LTSL + L L L L +N+L SL ++ L L++L ++ N+ +
Sbjct: 42 LEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFTSF 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + + +L L N++TSL + L L+ ++ N+ ++ + E + L NL+++
Sbjct: 102 PKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKILPK-EMELLQNLEAL 160
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L +NQ TS + L +LYLS NQL + L +I L+ L+++ L N++
Sbjct: 161 NLSHNQFTSFPKEIRRQQNLKWLYLSRNQL-KTLSKEIVELQNLQSLHLDGNQL 213
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LTSL + L +L L L++N S + L KL++L + NQL +L
Sbjct: 65 LRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFTSFPKETRQLQKLRILNLAGNQLTSL 124
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +++L L L NR L + L L+ N+ NQ T + E + NL +
Sbjct: 125 PKEMELLQNLERLDLAGNRFKILPKEMELLQNLEALNLSHNQFTSFPK-EIRRQQNLKWL 183
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+ +++ + L L L+L NQL+ + +I + L ++L NK+
Sbjct: 184 YLSRNQLKTLSKEIVELQNLQSLHLDGNQLSS-IPKEIGQFQNLFELNLQNNKL 236
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N TS +R +L WL+L+ N+LK+L ++ L LQ L ++ NQL ++
Sbjct: 157 LEALNLSHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSI 216
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I F L L NN++ +L + L LQV + N + + E Q L
Sbjct: 217 PKEIGQFQNLFELNLQNNKLKTLPKEIGLLQNLQVLRLYSNPFSFKEKQEIQKL 270
>gi|196008717|ref|XP_002114224.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
gi|190583243|gb|EDV23314.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
Length = 608
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 3/206 (1%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
SDD+K AL+ L + +N + +I E+ + KL + N L L N+ L +L L
Sbjct: 105 SDDVKLLNALVALDIRDNQLENIPESVRELQQLSKLALSRNALVGLPNATCDLINLKSLM 164
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR 149
L +N+L L ++G L L++L I NQL LP IQ + L L +NN++ L +
Sbjct: 165 LEHNKLTELPSEIGNLLHLEILDISNNQLSELPHSIQKLACLKFLNMSNNKLEVLPSEIA 224
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+ L+ N+ N+I ++ D FQ L+ L+ + ++ N I + S L LYL N
Sbjct: 225 FMKGLKDLNISSNKIKELKVD-FQLLNKLERLDIRCNHIEEV-PVFSTDNTLKELYLGSN 282
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKI 235
++ L ++ L + +D+S NKI
Sbjct: 283 RIKNLLGSTLQKLSVVAIMDMSENKI 308
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
+L+ L L++N+LK++ + L+ L L I NQLE +P ++ QL L + N +
Sbjct: 89 VELSKLDLSSNQLKAISDDVKLLNALVALDIRDNQLENIPESVRELQQLSKLALSRNALV 148
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L L L+ ++ N++T + E NL +L+ + + NNQ++ + S+ L L
Sbjct: 149 GLPNATCDLINLKSLMLEHNKLTEL-PSEIGNLLHLEILDISNNQLSELPHSIQKLACLK 207
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+L +S+N+L E L +I +K L+ +++S NKI +
Sbjct: 208 FLNMSNNKL-EVLPSEIAFMKGLKDLNISSNKIKEL 242
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Query: 58 FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ 117
F I +L++ N L+ L +S+ T L +L L NN+L +L ++ +++KL+ +++ N+
Sbjct: 452 FSSRIEELYLSSNKLSQLPSSMANFTKLTYLDLGNNQLGNLPIEMESMTKLREIILSNNR 511
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
A+PS I S L L A +N+I S+D L+ L++L V ++ N I V E L
Sbjct: 512 FAAIPSVIYTLSSLEVLLATDNKIESIDVSGLKQLSELSVLDLQNNDIKEV-PPELGTLK 570
Query: 177 NLDSISLQNN 186
L S+ L N
Sbjct: 571 ALKSLQLGGN 580
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L+L++N+L L + +KL L + NQL LP +++ ++L + +NNR ++ +
Sbjct: 459 LYLSSNKLSQLPSSMANFTKLTYLDLGNNQLGNLPIEMESMTKLREIILSNNRFAAIPSV 518
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ L+ L+V N+I + + L L + LQNN I + L L L L L
Sbjct: 519 IYTLSSLEVLLATDNKIESIDVSGLKQLSELSVLDLQNNDIKEVPPELGTLKALKSLQLG 578
Query: 208 HN 209
N
Sbjct: 579 GN 580
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL + N L ++++ ++ L L L + +N+L+++ + L +L L + +N L L
Sbjct: 91 LSKLDLSSNQLKAISDDVKLLNALVALDIRDNQLENIPESVRELQQLSKLALSRNALVGL 150
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ L SL +N++T L + L L++ ++ NQ++ + Q L L +
Sbjct: 151 PNATCDLINLKSLMLEHNKLTELPSEIGNLLHLEILDISNNQLSELPH-SIQKLACLKFL 209
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK---F 238
++ NN++ + S ++ + L L +S N++ E + D + L +L +D+ N I + F
Sbjct: 210 NMSNNKLEVLPSEIAFMKGLKDLNISSNKIKELKV-DFQLLNKLERLDIRCNHIEEVPVF 268
Query: 239 GTRN 242
T N
Sbjct: 269 STDN 272
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVI---EQNQLEALPSDIQLFSQLGSLYANNNRI 141
L L+L +NR+K+L G TL KL ++ I +N++E +P ++ QL NN I
Sbjct: 274 LKELYLGSNRIKNLLG--STLQKLSVVAIMDMSENKIEFVPDEVVNMKQLERFDLTNNDI 331
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
+ L + +T+L+ ++ N + +RRD Q
Sbjct: 332 SGLPCNMGNMTQLKSLILNGNPLRTLRRDIVQ 363
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG---QLGTLSKLQLLVIE-QNQLEALPSDI 125
N+++ L ++ +T L L LN N L++L Q GT++ L+ L + L S +
Sbjct: 329 NDISGLPCNMGNMTQLKSLILNGNPLRTLRRDIVQRGTVAILKFLRSRIAGTIPDLASSV 388
Query: 126 QLFSQ-----------LGSLYANNNRITSLDG----LLRGLTKLQVFNMDFNQITMVRRD 170
+Q GS + + + + G ++ G +++V + N +T V
Sbjct: 389 DTNTQGNTRINATHSSTGSNVDASEKTSEIPGDLWSVVAGSDQIRVVDFRKNVLTTVPEP 448
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ ++ + L +N+++ + SS++ TKL YL L +NQL + ++ + +LR + L
Sbjct: 449 LIEFSSRIEELYLSSNKLSQLPSSMANFTKLTYLDLGNNQLGNLPI-EMESMTKLREIIL 507
Query: 231 SYNK 234
S N+
Sbjct: 508 SNNR 511
>gi|431904324|gb|ELK09715.1| Biglycan [Pteropus alecto]
Length = 372
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 109 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 168
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 169 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 228
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 229 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 285
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 286 LHLDNNKLSRVPTGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAY-----YNGIS 340
Query: 237 KF 238
F
Sbjct: 341 LF 342
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 104 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 162
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 163 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 220
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 221 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 269
>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
Length = 1011
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 10/218 (4%)
Query: 29 LTSDDLKGTPALIT-------LLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLR 80
++ + L+ P ++T L+L+ +T I + T + +L + N +T + ++
Sbjct: 87 ISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQIPEAIA 146
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT+L L L NN++ + + L+ L ++ NQ+ +P I + L L +NN+
Sbjct: 147 KLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQLILSNNQ 206
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
IT + + LT L ++ N+IT + + NL NL + L NN+IT + +++ LT
Sbjct: 207 ITQIPEAIANLTNLTQLDLLNNKITQI-PEAIANLINLTQLDLLNNKITQIPEAIAKLTN 265
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L LS N++T+ + + I L L +DL NKI +
Sbjct: 266 LTQLILSDNKITQ-IPEAIAKLTNLTQLDLHSNKITQI 302
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
V NNL +L L GL +L L ++ N L+S+ + + L+ L++ + +L +P I
Sbjct: 64 VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIA 123
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
+ L L +NN+IT + + LT L + NQIT + + L NL L NN
Sbjct: 124 KLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQI-PEAIAKLTNLTQFILSNN 182
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
QIT + +++ LT L L LS+NQ+T+ + + I L L +DL NKI +
Sbjct: 183 QITQIPEAIANLTNLTQLILSNNQITQ-IPEAIANLTNLTQLDLLNNKITQI 233
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L+L NN IT I E T + +L + N +T + ++ L +L L L NN++ +
Sbjct: 197 LTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQI 256
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ L+ L L++ N++ +P I + L L ++N+IT + + LT L +
Sbjct: 257 PEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNLTQLD 316
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
+ N+IT + + L NL + L +N IT++
Sbjct: 317 LRSNKITQI-PEAIAKLTNLTQLDLSDNSITNI 348
>gi|225452749|ref|XP_002277477.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Vitis vinifera]
Length = 783
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Query: 65 LHVGFNNLTS-LNNSLRGLTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEA-L 121
L +G NNLT + +S LT+L +L+L+ N++ + Q+G L L+ L + N L +
Sbjct: 171 LDLGNNNLTGVIPSSFGNLTNLTFLYLDGNKISGFIPPQIGKLKNLRFLYLSSNGLHGPI 230
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRG-LTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P +I L LY N++ L G + KL N+ N +T V F NL NL+S
Sbjct: 231 PPEIGKLKNLEVLYLFYNKLHGLIPPEIGNMKKLIFLNLRSNNLTGVIPSSFGNLTNLNS 290
Query: 181 ISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L+ NQI+ + + L L+YL LS NQ++ F+ ++I LK+L +D+S N I
Sbjct: 291 LTLRGNQISGFIPPEIGYLLNLSYLDLSENQISGFIPEEIVNLKKLGHLDMSNNLI 346
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 120 ALPSDIQLFSQLGSLYANNNRITS-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
++P I +QL L N +T L L LT+L+V + N++ E + NL
Sbjct: 109 SIPHQIGTLTQLTYLSLGLNNLTGELPLSLANLTQLEVLSFYSNRLHGSILPEIGKMKNL 168
Query: 179 DSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ L NN +T + SS LT L +LYL N+++ F+ I LK LR + LS N ++
Sbjct: 169 TVLDLGNNNLTGVIPSSFGNLTNLTFLYLDGNKISGFIPPQIGKLKNLRFLYLSSNGLH 227
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 70 NNLTS-LNNSLRGLTDLNWLFLNNNRLKS-LEGQLGTLSKLQLLVIEQNQLEA-LPSDIQ 126
NNLT + +S LT+LN L L N++ + ++G L L L + +NQ+ +P +I
Sbjct: 272 NNLTGVIPSSFGNLTNLNSLTLRGNQISGFIPPEIGYLLNLSYLDLSENQISGFIPEEIV 331
Query: 127 LFSQLGSLYANNNRITS-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+LG L +NN I + L L +++ FN+ N ++ N + SI L +
Sbjct: 332 NLKKLGHLDMSNNLIRGKIPSQLGYLKEVEYFNLSHNNLSGTIPHSISNNYMWTSIDLSH 391
Query: 186 NQITSMNSS 194
NQ+ S +++
Sbjct: 392 NQLESQSTT 400
>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 989
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L+SL + L++L L L N+L SL ++ LS LQ L + N+L +L
Sbjct: 147 LQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLSSLPAEIAQLSNLQNLDLWHNKLSSL 206
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I S L +L + N+++SL + L+ LQ ++ +NQ++ + + Q L NL S+
Sbjct: 207 PAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQNLDLRYNQLSNLPVEIVQ-LSNLQSL 265
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+L +NQ+ S+ + LT L L LSHN+L+ + +I L L++++LSYNK++
Sbjct: 266 NLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSLPV-EIGQLNSLQSLNLSYNKLS 319
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 14/205 (6%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN------------ 92
+ + + E A +L + LT+L + LT L L L
Sbjct: 1 MTEEELLQVIEKAAAEGWEELDLSGKGLTTLPPEIGKLTQLKKLILGKHKYDQGYIIDTI 60
Query: 93 -NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N+L L ++G L++L+ L I +NQL+ LP++I + L SL+ N+++SL + L
Sbjct: 61 GNKLSELPKEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARL 120
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ LQ ++ +N + E L NL S+ L+ N+++S+ + + L+ L L L +NQL
Sbjct: 121 SNLQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQL 180
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKIN 236
+ L +I L L+ +DL +NK++
Sbjct: 181 SS-LPAEIAQLSNLQNLDLWHNKLS 204
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 105/179 (58%), Gaps = 2/179 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N L+SL + L++L L L +N+L SL ++ LS LQ L + N+L +L
Sbjct: 170 LQNLDLRYNQLSSLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSL 229
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I S L +L N++++L + L+ LQ N+ NQ+ + + FQ L +L S+
Sbjct: 230 PAEIVQLSNLQNLDLRYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQ-LTSLQSL 288
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+L +N+++S+ + L L L LS+N+L+ L +I L L++++L N++N+ T
Sbjct: 289 NLSHNKLSSLPVEIGQLNSLQSLNLSYNKLSS-LPAEIGQLTCLQSLNLRNNQLNRLPT 346
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 11/201 (5%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLR 80
L + L PA I L L N ++ H ++ P I +L + FN L+SL +
Sbjct: 175 LRYNQLSSLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIV 234
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L++L L L N+L +L ++ LS LQ L + NQL +L +I + L SL ++N+
Sbjct: 235 QLSNLQNLDLRYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNK 294
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL-T 199
++SL + L LQ N+ +N+++ + E L L S++L+NNQ+ + + + L
Sbjct: 295 LSSLPVEIGQLNSLQSLNLSYNKLSSLPA-EIGQLTCLQSLNLRNNQLNRLPTEIGHLHL 353
Query: 200 KLAYLYLSHNQLTEFLLDDIR 220
L L L +N L +FL +IR
Sbjct: 354 HLKVLTLDNNPL-KFLPAEIR 373
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ N L+SL + L L L L+ N+L SL ++G L+ LQ L + NQL
Sbjct: 284 SLQSLNLSHNKLSSLPVEIGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQLNR 343
Query: 121 LPSDI-QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
LP++I L L L +NN + L +R ++ N Q+
Sbjct: 344 LPTEIGHLHLHLKVLTLDNNPLKFLPAEIRNRHSQRILNFYKQQL 388
>gi|156396906|ref|XP_001637633.1| predicted protein [Nematostella vectensis]
gi|156224747|gb|EDO45570.1| predicted protein [Nematostella vectensis]
Length = 319
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 3/197 (1%)
Query: 41 ITLLLVNNN--ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+ +LL+N+N I E + +R+L + N LT L + LT+L L L++N L L
Sbjct: 80 VQILLLNDNQIIMPPVELVYLSRLRELCLDHNQLTLLPSGFGRLTNLKVLCLSHNNLGYL 139
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L +L+ L I QL ALP+DI L L A N ITSL + GL LQ +
Sbjct: 140 ASEICELVQLEELWIINTQLMALPADICRLKLLKKLSAGKNMITSLPDKISGLVSLQWLS 199
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N ++ + EF L L + L N+ +L GL L L L N + +
Sbjct: 200 LRENHLSSL-PSEFFKLPKLAHLDLNMNKFEEFPENLIGLVSLECLSLRGNCIKSLADNC 258
Query: 219 IRGLKRLRTVDLSYNKI 235
+ GL +L VD+ N++
Sbjct: 259 VEGLPKLCKVDIRDNQV 275
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ LT + +SL+ L + L LN+N++ +L LS+L+ L ++ NQL LPS
Sbjct: 60 LNLSHRELTVIPDSLKKLKHVQILLLNDNQIIMPPVELVYLSRLRELCLDHNQLTLLPSG 119
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
+ L L ++N + L + L +L+ + Q+ + D L L +S
Sbjct: 120 FGRLTNLKVLCLSHNNLGYLASEICELVQLEELWIINTQLMALPAD-ICRLKLLKKLSAG 178
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N ITS+ +SGL L +L L N L+ L + L +L +DL+ NK +F
Sbjct: 179 KNMITSLPDKISGLVSLQWLSLRENHLSS-LPSEFFKLPKLAHLDLNMNKFEEF 231
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
++L + +L +P ++ + L N+N+I L L++L+ +D NQ+T++
Sbjct: 58 KILNLSHRELTVIPDSLKKLKHVQILLLNDNQIIMPPVELVYLSRLRELCLDHNQLTLLP 117
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
F L NL + L +N + + S + L +L L++ + QL L DI LK L+ +
Sbjct: 118 SG-FGRLTNLKVLCLSHNNLGYLASEICELVQLEELWIINTQLMA-LPADICRLKLLKKL 175
Query: 229 DLSYNKINKFGTRNEG 244
N I + G
Sbjct: 176 SAGKNMITSLPDKISG 191
>gi|126273103|ref|XP_001368489.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Monodelphis
domestica]
Length = 582
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +S++ LT L L+L +N+L+SL ++G L L L + +N L +LP + +L L
Sbjct: 115 LPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRML 174
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++ + ++ L L + FN+IT V +D +NL L +S++ N+I + +
Sbjct: 175 DLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD-IKNLSKLIMLSIRENKIKQLPAE 233
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 234 IGELCNLITLDVAHNQL-EHLPKEIGTCIQITNLDLQHNEL 273
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS
Sbjct: 127 ELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPS 186
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ L +LY NRIT+++ ++ L+KL + ++ N+I + E L NL ++ +
Sbjct: 187 VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPA-EIGELCNLITLDV 245
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+NQ+ + + ++ L L HN+L + L + I L L + L YN+++
Sbjct: 246 AHNQLEHLPKEIGTCIQITNLDLQHNELLD-LPETIGNLSSLNRLGLRYNRLSAI 299
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 257 IGTCIQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ LS L L L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPEGLLSSLVNLNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N L + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLAKIPEDVSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++ +L + LT L + N + + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGLGENLLAHL-PEEIGTLENLEE 521
Query: 181 ISLQNN 186
+ L +N
Sbjct: 522 LYLNDN 527
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 40 LITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ E I L + N L L ++ L+ LN L L NRL ++
Sbjct: 240 LITLDVAHNQLEHLPKEIGTCIQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAI 299
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD-GLLRGLTKLQV 156
L S L+ L +E N + LP + L SL N S G + +
Sbjct: 300 PRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCFQSYPVGGPSQFSTIYS 359
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
NM+ N+I + F L +++++NQ+TS+ T + L L+ NQL + +
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAK-IP 418
Query: 217 DDIRGLKRLRTVDLSYNKINKF 238
+D+ GL L + LS N + K
Sbjct: 419 EDVSGLVSLEVLILSNNVLKKL 440
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL--- 147
NN+L +L +G L+ L L + +N L LP +I L LY N+N +L GL
Sbjct: 479 TNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDN--PNLHGLPFE 536
Query: 148 LRGLTKLQVFNMD 160
L +KL + +++
Sbjct: 537 LALCSKLSIMSIE 549
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 79 LRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSL 134
L L +LN L L N +S G S + L +E N++ +P I FS+ L L
Sbjct: 327 LSSLVNLNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGI--FSRAKVLSKL 384
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+N++TSL T + N+ NQ+ + D L +L+ + L NN + +
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPED-VSGLVSLEVLILSNNVLKKLPHG 443
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L L KL L L N+L E L ++I LK L+ + L+ N++N
Sbjct: 444 LGNLRKLRELDLEENKL-ESLPNEIAYLKDLQKLVLTNNQLN 484
>gi|82240198|sp|Q7SXW3.1|LRC40_DANRE RecName: Full=Leucine-rich repeat-containing protein 40
gi|32766407|gb|AAH55223.1| Leucine rich repeat containing 40 [Danio rerio]
Length = 601
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L L++N+L+S+ + L L +L I NQL +LP I QL L ++N++T
Sbjct: 80 TDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLT 139
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + LT L+ ++ N I + RD Q L NLD + L NN + + SL+ L L
Sbjct: 140 ELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQ-LVNLDELDLSNNHLIDIPESLANLQNLV 198
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LS N+L + L I +K LR +D S N++
Sbjct: 199 KLDLSCNKL-KSLPPAISQMKNLRMLDCSRNQMESI 233
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 4/197 (2%)
Query: 40 LITLLLVNNNITHIHENA-FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L LLL +N + I ++ P + L + N L+SL +S+ L L L L++N+L L
Sbjct: 82 LTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTEL 141
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ L+ L+ L ++QN +E +P D+ L L +NN + + L L L +
Sbjct: 142 PSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLD 201
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N++ + + NL + NQ+ S+ L+ + L LYL HN+L L +
Sbjct: 202 LSCNKLKSL-PPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLR--YLPE 258
Query: 219 IRGLKRLRTVDLSYNKI 235
+ K L+ + N+I
Sbjct: 259 LPCCKTLKELHCGNNQI 275
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLN 86
L+ + LK P I+ + L + + + PP + ++ L +N LR L +L
Sbjct: 202 LSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQME-SLEQLYLRHNKLRYLPELP 260
Query: 87 W------LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
L NN+++ LE + L L+ L LL + N++++LP +I L L L NN
Sbjct: 261 CCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNN 320
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
I+SL L L KL+ +++ N + +RRD
Sbjct: 321 DISSLPCGLGTLPKLKSLSLEGNPLRAIRRD 351
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 107/269 (39%), Gaps = 70/269 (26%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSL-----------------NNSLRG 81
+L L L +N + ++ E T+++LH G N + L +N ++
Sbjct: 242 SLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKS 301
Query: 82 LTD-------LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI------QLF 128
L + L L L NN + SL LGTL KL+ L +E N L A+ D+ +L
Sbjct: 302 LPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELL 361
Query: 129 SQLGSL-------------------------------------YANNNRITSLDGLLRGL 151
L S Y+ T D + +
Sbjct: 362 KYLRSRVQEPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAV 421
Query: 152 TKLQVFNMDF--NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
V N++F NQ+T V +L I+L N++T++ + L +L ++ L +N
Sbjct: 422 DGNPVANVNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCHLKQLMHIDLRNN 481
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L ++ + GL +LR+V LS+N+ F
Sbjct: 482 LLISLPME-LEGLIKLRSVILSFNRFKSF 509
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +++GFN LT++ L L + L NN L SL +L L KL+ +++ N+ ++
Sbjct: 449 SLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKS 508
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
P + L ++ ++N++ +D + ++ L++L ++ N I V E N +L
Sbjct: 509 FPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQV-PPELGNCTSLR 567
Query: 180 SISLQNN 186
++ L N
Sbjct: 568 ALMLDGN 574
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L D+N F N+L ++ L +L + + N L +LP +++ +L S+ + NR
Sbjct: 449 SLADINLGF---NKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNR 505
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
S +L + L+ + NQ+ + + + L L ++ L NN I + L T
Sbjct: 506 FKSFPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTS 565
Query: 201 LAYLYLSHN 209
L L L N
Sbjct: 566 LRALMLDGN 574
>gi|449103429|ref|ZP_21740175.1| hypothetical protein HMPREF9730_01072 [Treponema denticola AL-2]
gi|448965281|gb|EMB45946.1| hypothetical protein HMPREF9730_01072 [Treponema denticola AL-2]
Length = 673
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 17/220 (7%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
++G + LTS D++G PAL L N +T + P + KL N LTS++ + L
Sbjct: 364 DSGRNDLTSLDVQGLPALKILSCTVNELTSLKVRDLPA-LEKLDCSVNQLTSID--ILEL 420
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L + N+ S+ + L+ L+ L NQL +L D++ + L L +N++T
Sbjct: 421 TALKELNCSLNQFTSI--NILKLTALKELDCSTNQLTSL--DVRNLAALEELDCRDNKLT 476
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
SLD +RGL LQ N++T + E Q+L L ++ N++TS+N + GLT L
Sbjct: 477 SLD--VRGLNTLQKLYCSENELTSL---EIQDLKTLQKLNCYKNKLTSLN--VQGLTALQ 529
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
+L +N+LT +++GL LR ++ N + + ++
Sbjct: 530 WLNCGYNELTTL---NLKGLHALRDLECFKNNLPELDVQD 566
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 17/216 (7%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
+ G + LT +++G AL L +N +T + + ++ L G N LTSL+ S GL
Sbjct: 133 DCGGNRLTELNVQGLTALQKLFCDDNLLTSLDVSGVTA-LQSLSCGENLLTSLDVS--GL 189
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L+ N N+L SL+ Q +L+ LQ L N+L +L ++Q L L+ N+NR+T
Sbjct: 190 TGLRELYCNRNQLSSLDVQ--SLTALQDLFCNANKLTSL--NVQDLKVLQRLHCNSNRLT 245
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
LD +R L+ LQ + N++T + + + L + N +T ++ + LT L+
Sbjct: 246 LLD--VRDLSALQELDCVGNELTSL---DVHGVTALWELECSKNMLTLLD--VQSLTSLS 298
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L S NQLT D+R L L +D S NK+
Sbjct: 299 KLDCSANQLTSL---DVRNLAALEELDCSNNKLTAL 331
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 50/219 (22%)
Query: 62 IRKLHVGFNNLTSLNN-------------------SLRGLTDLNWLFLNNNRLKSLE--- 99
+++L FN LTSLN +++GLT L LF ++N L SL+
Sbjct: 108 LQELDCAFNRLTSLNVHSLTALHKLDCGGNRLTELNVQGLTALQKLFCDDNLLTSLDVSG 167
Query: 100 ---------GQ-------LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
G+ + L+ L+ L +NQL +L D+Q + L L+ N N++TS
Sbjct: 168 VTALQSLSCGENLLTSLDVSGLTGLRELYCNRNQLSSL--DVQSLTALQDLFCNANKLTS 225
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L+ ++ L LQ + + N++T++ + L LD + N++TS++ + G+T L
Sbjct: 226 LN--VQDLKVLQRLHCNSNRLTLLDVRDLSALQELDCVG---NELTSLD--VHGVTALWE 278
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
L S N LT L D++ L L +D S N++ RN
Sbjct: 279 LECSKNMLT---LLDVQSLTSLSKLDCSANQLTSLDVRN 314
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 18/180 (10%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQL 118
+++L N LTSL+ + G+T L L + N L L+ Q L +LSKL NQL
Sbjct: 253 SALQELDCVGNELTSLD--VHGVTALWELECSKNMLTLLDVQSLTSLSKLD---CSANQL 307
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+L D++ + L L +NN++T+L ++GL LQ N N++T + E Q L L
Sbjct: 308 TSL--DVRNLAALEELDCSNNKLTAL--YVQGLNALQELNCSENELTSL---EIQGLTAL 360
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + N +TS++ + GL L L + N+LT + D+ L++L D S N++
Sbjct: 361 EVLDSGRNDLTSLD--VQGLPALKILSCTVNELTSLKVRDLPALEKL---DCSVNQLTSI 415
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 101 QLGTLSKLQLLVIEQ-----NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
QL TL L V+++ N+L +L ++ + L L NR+T L+ ++GLT LQ
Sbjct: 96 QLSTLDVCNLTVLQELDCAFNRLTSL--NVHSLTALHKLDCGGNRLTELN--VQGLTALQ 151
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
D N +T + + + L S+S N +TS++ +SGLT L LY + NQL+
Sbjct: 152 KLFCDDNLLTSL---DVSGVTALQSLSCGENLLTSLD--VSGLTGLRELYCNRNQLSSL- 205
Query: 216 LDDIRGLKRLRTVDLSYNKINKFGTRN 242
D++ L L+ + + NK+ ++
Sbjct: 206 --DVQSLTALQDLFCNANKLTSLNVQD 230
>gi|449117606|ref|ZP_21754023.1| hypothetical protein HMPREF9726_02008 [Treponema denticola H-22]
gi|448950807|gb|EMB31628.1| hypothetical protein HMPREF9726_02008 [Treponema denticola H-22]
Length = 631
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 17/220 (7%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
++G + LTS D++G PAL L N +T + P + KL N LTS++ + L
Sbjct: 322 DSGRNDLTSLDVQGLPALKILSCTVNELTSLKVRDLPA-LEKLDCSVNQLTSID--ILEL 378
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L + N+ S+ + L+ L+ L NQL +L D++ + L L +N++T
Sbjct: 379 TALKELNCSLNQFTSI--NILKLTALKELDCSTNQLTSL--DVRNLAALEELDCRDNKLT 434
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
SLD +RGL LQ N++T + E Q+L L ++ N++TS+N + GLT L
Sbjct: 435 SLD--VRGLNTLQKLYCSENELTSL---EIQDLKTLQKLNCYKNKLTSLN--VQGLTALQ 487
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
+L +N+LT +++GL LR ++ N + + ++
Sbjct: 488 WLNCGYNELTTL---NLKGLHALRDLECFKNNLPELDVQD 524
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
+ G + LT +++G AL L +N +T + + ++ L G N LTSL+ S GL
Sbjct: 91 DCGGNRLTELNVQGLTALQKLFCDDNLLTSLDVSGVTA-LQSLSCGENLLTSLDVS--GL 147
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L+ N N L SL+ Q +L+ LQ L N+L +L ++Q L L+ N+NR+T
Sbjct: 148 TGLRELYCNRNHLFSLDVQ--SLTALQDLFCNANKLISL--NVQDLKVLQRLHCNSNRLT 203
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
SLD +R L+ LQ + N++T + + + L + N +T ++ + LT L+
Sbjct: 204 SLD--VRDLSALQELDCVGNELTSL---DVHGVTALWELECSKNMLTLLD--VQSLTSLS 256
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L S NQL D+R L L +D NK+ R
Sbjct: 257 KLDCSANQLISL---DVRNLAALEELDCRDNKLTSLDVR 292
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
+ +L N LTSL+ +RGL L L+ + N L SLE Q L+ L++L +N L
Sbjct: 274 AALEELDCRDNKLTSLD--VRGLNTLQKLYCSENELTSLEIQ--GLTALEVLDSGRNDLT 329
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+L D+Q L L N +TSL +R L L+ + NQ+T + E L L+
Sbjct: 330 SL--DVQGLPALKILSCTVNELTSLK--VRDLPALEKLDCSVNQLTSIDILELTALKELN 385
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
SL NQ TS+N + LT L L S NQLT D+R L L +D NK+
Sbjct: 386 C-SL--NQFTSIN--ILKLTALKELDCSTNQLTSL---DVRNLAALEELDCRDNKLTSLD 437
Query: 240 TR 241
R
Sbjct: 438 VR 439
>gi|320165719|gb|EFW42618.1| non-receptor protein kinase [Capsaspora owczarzaki ATCC 30864]
Length = 978
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 27/198 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
+ + G AL L L N IT I +AF ++ L++ N +T++ N+ GLT L
Sbjct: 86 IPTSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNNNTITTIAANAFAGLTAL 145
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
NWL L+++++ S I N +LP+ QL +LY NN ++++
Sbjct: 146 NWLDLSDSQITS---------------IPANVFSSLPALAQL-----NLY--NNWLSAVP 183
Query: 146 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAY 203
GLT L M N+IT + + F L+ L + LQ+NQIT+++ S+ +GLT L
Sbjct: 184 TSAFTGLTALTQLTMYGNRITTISANAFTGLNALAQLFLQSNQITTISASAFTGLTALKQ 243
Query: 204 LYLSHNQLTEFLLDDIRG 221
LYL NQ+T + G
Sbjct: 244 LYLYGNQITTISANAFAG 261
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 31/238 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNS-LRGLTDL 85
+ S G AL L L NN I+ + NAF + +L + N +T++ S GL+ L
Sbjct: 14 VPSSAFTGLTALQILSLFNNQISSVAANAFTSLTALVQLQLYGNQITTIPASAFSGLSKL 73
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITS 143
+ L LNNN L ++ T L+ L L + NQ+ + S + L +LY NNN IT+
Sbjct: 74 SLLQLNNNWLSAIPTSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNNNTITT 133
Query: 144 LDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-------- 194
+ GLT L ++ +QIT + + F +L L ++L NN ++++ +S
Sbjct: 134 IAANAFAGLTALNWLDLSDSQITSIPANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTAL 193
Query: 195 -----------------LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+GL LA L+L NQ+T GL L+ + L N+I
Sbjct: 194 TQLTMYGNRITTISANAFTGLNALAQLFLQSNQITTISASAFTGLTALKQLYLYGNQI 251
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 7/185 (3%)
Query: 62 IRKLHVGFNNL--TSLNNSLRGLTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQL 118
+ +LH+ +NNL T +++ GLT L L L NN++ S+ +L+ L L + NQ+
Sbjct: 1 MTQLHL-YNNLFSTVPSSAFTGLTALQILSLFNNQISSVAANAFTSLTALVQLQLYGNQI 59
Query: 119 EALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+P S S+L L NNN ++++ GLT L ++ NQIT + F L
Sbjct: 60 TTIPASAFSGLSKLSLLQLNNNWLSAIPTSAFTGLTALTQLSLYGNQITTISASAFAGLT 119
Query: 177 NLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L ++ L NN IT++ + + +GLT L +L LS +Q+T + L L ++L N +
Sbjct: 120 ALQALYLNNNTITTIAANAFAGLTALNWLDLSDSQITSIPANVFSSLPALAQLNLYNNWL 179
Query: 236 NKFGT 240
+ T
Sbjct: 180 SAVPT 184
>gi|432103981|gb|ELK30814.1| Leucine-rich repeat and immunoglobulin-like domains protein 2,
partial [Myotis davidii]
Length = 975
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 36 GTPA--LITLLLVNNNITHI--HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
G P + L LV+N I I E F P + L + N ++ + + L +L L+
Sbjct: 36 GEPTSNITALSLVHNIIAEINAEEFQFYPALESLDLSSNVISEIKTASFPRMQLKYLNLS 95
Query: 92 NNRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-L 148
NNR+ LE G LS L+V + +N++ +P I L L NRI ++GL
Sbjct: 96 NNRITILEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKVVEGLTF 155
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLS 207
+GL L+ M N I+ ++ F L N++ + L++N +T +N L GL L LY++
Sbjct: 156 QGLDSLKSLKMQRNGISKLKDGAFFGLDNMEELELEHNNLTEVNKGWLYGLRMLQQLYVN 215
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
N + D +RL +DLSYN++ +
Sbjct: 216 QNAVERISPDAWEFCQRLSELDLSYNQLTR 245
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
+G +L +L + N I+ + + AF G +N+ L LT++N
Sbjct: 155 FQGLDSLKSLKMQRNGISKLKDGAF--------FGLDNMEELELEHNNLTEVN------- 199
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGL 151
+G L L LQ L + QN +E + D F Q L L + N++T LD GL
Sbjct: 200 -----KGWLYGLRMLQQLYVNQNAVERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGL 254
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYLS 207
+ L+ N+ N++T + F+ L NL +++L+NN+I+ + + +GLT L L L
Sbjct: 255 SLLERLNLGDNRVTHIADGVFRFLSNLQTLNLRNNEISWAIEDASEAFAGLTSLTKLILQ 314
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ+ GL+ L +DL+ N I
Sbjct: 315 GNQIKSITKKAFIGLESLEHLDLNNNAI 342
>gi|392968303|ref|ZP_10333719.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
gi|387842665|emb|CCH55773.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
Length = 840
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 96/204 (47%), Gaps = 35/204 (17%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L +LL +N I + PP I KL + FN LTS+ + L L+DL L LN
Sbjct: 602 PLLKIVLLYSNEIQQL-----PPQIGKLVNLQTLDLSFNKLTSVPDELGELSDLQSLVLN 656
Query: 92 -----------------------NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
+N+LKSL LG L+ L+ L I NQL LP+++
Sbjct: 657 SNQLESLPERLGELSNLRELYLGDNKLKSLSAGLGQLTNLKRLYIYHNQLTRLPAELSKL 716
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
L L N++ +L L LT L++ ++ NQ+T + L NL + L +NQ+
Sbjct: 717 INLEELSLGGNKLKNLSVELDQLTNLRILDLSANQLTGW-PTKLSKLSNLRELYLGDNQL 775
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLT 212
S+ + L LT L L LS NQLT
Sbjct: 776 KSLPAELGQLTNLQILDLSGNQLT 799
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT L L L +L L L N+LK+L +L L+ L++L + NQL
Sbjct: 696 LKRLYIYHNQLTRLPAELSKLINLEELSLGGNKLKNLSVELDQLTNLRILDLSANQLTGW 755
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ + S L LY +N++ SL L LT LQ+ ++ NQ+T DE NL N+ +
Sbjct: 756 PTKLSKLSNLRELYLGDNQLKSLPAELGQLTNLQILDLSGNQLTGW-PDELSNLSNMTYL 814
Query: 182 SLQNNQITS 190
+L+ +++
Sbjct: 815 NLKGTKLSE 823
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 24/191 (12%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
L N ++ + A TI L + L+S++ S+ L + L +N ++ L Q+G
Sbjct: 564 LKNEHLLALEIKALTDTITALDLHERELSSIHESVFSHPLLKIVLLYSNEIQQLPPQIGK 623
Query: 105 LSKLQL-----------------------LVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L LQ LV+ NQLE+LP + S L LY +N++
Sbjct: 624 LVNLQTLDLSFNKLTSVPDELGELSDLQSLVLNSNQLESLPERLGELSNLRELYLGDNKL 683
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
SL L LT L+ + NQ+T + E L NL+ +SL N++ +++ L LT L
Sbjct: 684 KSLSAGLGQLTNLKRLYIYHNQLTRLPA-ELSKLINLEELSLGGNKLKNLSVELDQLTNL 742
Query: 202 AYLYLSHNQLT 212
L LS NQLT
Sbjct: 743 RILDLSANQLT 753
>gi|254380384|ref|ZP_04995750.1| leucine-rich repeat protein [Streptomyces sp. Mg1]
gi|194339295|gb|EDX20261.1| leucine-rich repeat protein [Streptomyces sp. Mg1]
Length = 288
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 7/199 (3%)
Query: 42 TLLLVNNNITHIHENAFPPTIRKLH---VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+L +N +T I +R+LH +G N L S+ + L L +L+L++N+LK +
Sbjct: 77 VLILADNALTRISPQIA--QLRQLHTLDLGHNELASIPDELTELPLTKYLYLHDNQLKQI 134
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
LG L+ L+ L + NQL +LP I L L A +NR+T+L + L +L+
Sbjct: 135 PRSLGRLTALRYLNLGGNQLTSLPDTIGKMIGLVELRAEHNRLTALPESIGRLHQLRELW 194
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N +T + + +L L + L+ N +T + +L+GL++L +L L N+L L +
Sbjct: 195 LRGNTLTCL-PESVSDLAELRHVDLRENALTDVPEALAGLSRLRHLDLRSNRL-HTLPNW 252
Query: 219 IRGLKRLRTVDLSYNKINK 237
+ L L +DL +N I
Sbjct: 253 LPELPSLEKLDLRWNNIEP 271
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
NL SL SL T+L+ L L +N L + Q+ L +L L + N+L ++P ++
Sbjct: 60 QNLGSLPESLWQRTELHVLILADNALTRISPQIAQLRQLHTLDLGHNELASIPDELTELP 119
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT--------MVRRDEFQ-------- 173
LY ++N++ + L LT L+ N+ NQ+T M+ E +
Sbjct: 120 LTKYLYLHDNQLKQIPRSLGRLTALRYLNLGGNQLTSLPDTIGKMIGLVELRAEHNRLTA 179
Query: 174 ------NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
LH L + L+ N +T + S+S L +L ++ L N LT+ + + + GL RLR
Sbjct: 180 LPESIGRLHQLRELWLRGNTLTCLPESVSDLAELRHVDLRENALTD-VPEALAGLSRLRH 238
Query: 228 VDLSYNKINKF 238
+DL N+++
Sbjct: 239 LDLRSNRLHTL 249
>gi|148697568|gb|EDL29515.1| scribbled homolog (Drosophila), isoform CRA_b [Mus musculus]
Length = 1040
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|260789701|ref|XP_002589884.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
gi|229275068|gb|EEN45895.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
Length = 341
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N LT L + + L L WL++N+N+L +L + +L L++LV N+L L
Sbjct: 51 LEELYLQTNTLTELPSEVGELKKLGWLYINDNQLVTLPASICSLRNLKMLVASNNELSEL 110
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ + L LY N++T L + L L+ + N+++ + + + L NL +
Sbjct: 111 PAGFEQLQNLTKLYVGGNKLTELSSGVCSLQHLETVVVSNNKLSTL-PEGVERLKNLTEL 169
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ NQ + + L+ L L + N + FL D+I+ L RL+++ + + +F
Sbjct: 170 YIDGNQFRELPLGVCSLSNLEVLVVGPNPI-RFLPDEIKNLIRLKSLTIISCQFEEF 225
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 64 KLHVGFNN-LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
K+ V NN L+ L L +L L++ N+L L + +L L+ +V+ N+L LP
Sbjct: 98 KMLVASNNELSELPAGFEQLQNLTKLYVGGNKLTELSSGVCSLQHLETVVVSNNKLSTLP 157
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
++ L LY + N+ L + L+ L+V + N I + DE +NL L S++
Sbjct: 158 EGVERLKNLTELYIDGNQFRELPLGVCSLSNLEVLVVGPNPIRFLP-DEIKNLIRLKSLT 216
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + Q + L +L YL LS+N+L+ L + LKRLR V L NK F
Sbjct: 217 IISCQFEEFPRPIGDLEQLRYLALSNNKLSA-LPPTMDKLKRLRDVYLYENKFKTF 271
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 94/174 (54%), Gaps = 5/174 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N LT+++ S+ L L L ++N+L SL ++ +L L+ L ++ N L LPS+
Sbjct: 8 LDLSKNKLTTIHESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEELYLQTNTLTELPSE 67
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
+ +LG LY N+N++ +L + L L++ N+++ + F+ L NL + +
Sbjct: 68 VGELKKLGWLYINDNQLVTLPASICSLRNLKMLVASNNELSELPAG-FEQLQNLTKLYVG 126
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N++T ++S + L L + +S+N+L+ G++RL+ + Y N+F
Sbjct: 127 GNKLTELSSGVCSLQHLETVVVSNNKLSTL----PEGVERLKNLTELYIDGNQF 176
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
+TDL +L L+ N+L ++ +G L KL L + N+L +LP I L LY N +
Sbjct: 2 ITDLEYLDLSKNKLTTIHESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEELYLQTNTL 61
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T L + L KL ++ NQ+ + +L NL + NN+++ + + L L
Sbjct: 62 TELPSEVGELKKLGWLYINDNQLVTLPAS-ICSLRNLKMLVASNNELSELPAGFEQLQNL 120
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
LY+ N+LTE L + L+ L TV +S NK++
Sbjct: 121 TKLYVGGNKLTE-LSSGVCSLQHLETVVVSNNKLS 154
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L T+++ NN ++ + E + +L++ N L + L++L L + N ++ L
Sbjct: 143 LETVVVSNNKLSTLPEGVERLKNLTELYIDGNQFRELPLGVCSLSNLEVLVVGPNPIRFL 202
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L +L+ L I Q E P I QL L +NN++++L + L +L+
Sbjct: 203 PDEIKNLIRLKSLTIISCQFEEFPRPIGDLEQLRYLALSNNKLSALPPTMDKLKRLRDVY 262
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ N+ + +L L + ++NN+I+ + SSLS L++L L ++ N L
Sbjct: 263 LYENKFKTFP-EVLCSLPKLMVVDIRNNRISKIPSSLSHLSRLKRLVVAGNPL 314
>gi|224093925|ref|XP_002187536.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 3
[Taeniopygia guttata]
Length = 1059
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 33 DLKGTPALITLL-LVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRGLTDLNWLF 89
DL A ITLL L +N I +I + P ++ L + NN++ L S L +L+
Sbjct: 54 DLGPVSANITLLSLTSNKIANILSDHLKPFQSLETLDLSNNNISELKISSFPSLQLKYLY 113
Query: 90 LNNNRLKSLE-GQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
+N+NR+ S+E G LS LQ+L + +N++ A+P + S L L N N+I +DGL
Sbjct: 114 INSNRITSMEPGTFDNLSTTLQVLKLNRNKISAIPQKMFKLSHLQHLELNRNKIKKIDGL 173
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYL 206
FQ L L S+ LQ N +T M+ + GLT + L L
Sbjct: 174 T-----------------------FQGLPALKSLKLQRNGVTRLMDGAFWGLTNMEVLQL 210
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
HN LTE + GL L+ + LS N I++
Sbjct: 211 DHNNLTEVTKGWLYGLLMLQQLHLSQNAISRI 242
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 30/236 (12%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPP-TIRKLHVGFNNLTSLN-NSLRGL-TDLNW 87
SD LK +L TL L NNNI+ + ++FP ++ L++ N +TS+ + L T L
Sbjct: 77 SDHLKPFQSLETLDLSNNNISELKISSFPSLQLKYLYINSNRITSMEPGTFDNLSTTLQV 136
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSL-D 145
L LN N++ ++ ++ LS LQ L + +N+++ + Q L SL N +T L D
Sbjct: 137 LKLNRNKISAIPQKMFKLSHLQHLELNRNKIKKIDGLTFQGLPALKSLKLQRNGVTRLMD 196
Query: 146 GLLRGLTKLQVFNMDFNQITMVRR------------------------DEFQNLHNLDSI 181
G GLT ++V +D N +T V + D ++ L +
Sbjct: 197 GAFWGLTNMEVLQLDHNNLTEVTKGWLYGLLMLQQLHLSQNAISRISPDAWEFCQKLSEL 256
Query: 182 SLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+T ++ SS GL+ L LY+ +N++ +GL L+ +DL N+I+
Sbjct: 257 DLTFNQLTRLDDSSFIGLSVLVGLYIGNNKVNYIADCAFKGLSSLQILDLKNNEIS 312
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
+G PAL +L L N +T + + AF GLT++ L L++N
Sbjct: 175 FQGLPALKSLKLQRNGVTRLMDGAF---------------------WGLTNMEVLQLDHN 213
Query: 94 RLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRG 150
L + +G L L LQ L + QN + + D F Q L L N++T LD G
Sbjct: 214 NLTEVTKGWLYGLLMLQQLHLSQNAISRISPDAWEFCQKLSELDLTFNQLTRLDDSSFIG 273
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYL 206
L+ L + N++ + F+ L +L + L+NN+I+ MN + SGL KL L L
Sbjct: 274 LSVLVGLYIGNNKVNYIADCAFKGLSSLQILDLKNNEISWTIEDMNGAFSGLDKLKKLML 333
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N++ GL L +DLS N I
Sbjct: 334 QGNRIRSITKKAFSGLDALEHLDLSNNAI 362
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNS-LRGLTDL 85
+T L G L L L N I+ I +A F + +L + FN LT L++S GL+ L
Sbjct: 218 VTKGWLYGLLMLQQLHLSQNAISRISPDAWEFCQKLSELDLTFNQLTRLDDSSFIGLSVL 277
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L++ NN++ + + LS LQ+L ++ N++ I +
Sbjct: 278 VGLYIGNNKVNYIADCAFKGLSSLQILDLKNNEISW-------------------TIEDM 318
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAY 203
+G GL KL+ + N+I + + F L L+ + L NN I S+ + S + KL
Sbjct: 319 NGAFSGLDKLKKLMLQGNRIRSITKKAFSGLDALEHLDLSNNAIMSVQGNAFSQMKKLKE 378
Query: 204 LYLSHNQL 211
L+ + + L
Sbjct: 379 LHFNTSSL 386
>gi|124005686|ref|ZP_01690525.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123988754|gb|EAY28360.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 439
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 3/195 (1%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L +L L NNN+T + F + L + N + +L ++ L L L+L +N+L +L
Sbjct: 229 LRSLSLGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPEIKKLKHLEELYLYSNQLSAL 288
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L +L +L +++NQL LP +I L LY N++ L + L L+
Sbjct: 289 PPEIGELKELFMLGLDKNQLSDLPPEIGQLKNLQGLYVPKNKLALLPNEIVNLKDLRELR 348
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T + ++++ H L + L +NQ+ ++ + L L L LS N+L E L +
Sbjct: 349 LSDNQLTYLPEEKWKTKH-LKVLYLDSNQLKTLPIGICSLKNLETLNLSFNELEE-LPSE 406
Query: 219 IRGLKRLRTVDLSYN 233
+ LK LR +DL N
Sbjct: 407 VSNLKSLRWLDLEGN 421
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
LH+ N ++ + + L L L L + L SL +G L +LQ L + NQL LP+
Sbjct: 117 LHLDHNPFSTFPDEIFSLASLQDLALGDTGLSSLPSGIGRLRRLQKLDLRNNQLAYLPTK 176
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L + N+ T+L + L +L N+ N IT + + +L NL S+SL
Sbjct: 177 ITHLKNLRHLNLSGNQFTTLPKEVNSLKELVYLNISDNPITTLSLNP-SSLQNLRSLSLG 235
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NN +T + + L L L+LS NQ+ L +I+ LK L + L N+++
Sbjct: 236 NNNLTELPPEIFELKNLEVLWLSKNQIKN-LPPEIKKLKHLEELYLYSNQLS 286
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 23/199 (11%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N +T+L+ + L +L L L NN L L ++ L L++L + +NQ++ LP +
Sbjct: 209 LNISDNPITTLSLNPSSLQNLRSLSLGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPE 268
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT------------------- 165
I+ L LY +N++++L + L +L + +D NQ++
Sbjct: 269 IKKLKHLEELYLYSNQLSALPPEIGELKELFMLGLDKNQLSDLPPEIGQLKNLQGLYVPK 328
Query: 166 ---MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+ +E NL +L + L +NQ+T + L LYL NQL + I L
Sbjct: 329 NKLALLPNEIVNLKDLRELRLSDNQLTYLPEEKWKTKHLKVLYLDSNQLKTLPI-GICSL 387
Query: 223 KRLRTVDLSYNKINKFGTR 241
K L T++LS+N++ + +
Sbjct: 388 KNLETLNLSFNELEELPSE 406
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L + ++ L+ N L +L + L + L ++ N P +I + L L + +
Sbjct: 88 LQQMKYIGLDGNNLTTLPTEFKLLQNVINLHLDHNPFSTFPDEIFSLASLQDLALGDTGL 147
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
+SL + L +LQ ++ NQ+ + + +L NL ++L NQ T++ ++ L +L
Sbjct: 148 SSLPSGIGRLRRLQKLDLRNNQLAYL-PTKITHLKNLRHLNLSGNQFTTLPKEVNSLKEL 206
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
YL +S N +T L+ L+ LR++ L N + +
Sbjct: 207 VYLNISDNPITTLSLNP-SSLQNLRSLSLGNNNLTEL 242
>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 422
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 22/195 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I +L + N LT+L + L L L L NN L +L +G L L+ L + NQL+ L
Sbjct: 88 IERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTL 147
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI L LY +NN++ +L + L L+ N+D NQ+ + +D L NL +
Sbjct: 148 PKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKD-IGKLQNLTEL 206
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF---------------------LLDDIR 220
+L NN +T++ + L L L L +N+LT L +DI
Sbjct: 207 NLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGALLTTLPNDIG 266
Query: 221 GLKRLRTVDLSYNKI 235
LK LR ++LS N+I
Sbjct: 267 YLKSLRELNLSGNQI 281
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 28/198 (14%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L++ N L +L + L +L L+L+NN+LK+L +G L L+ L ++ NQL+ L
Sbjct: 134 LRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELNLDGNQLKTL 193
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRD--EFQNLH 176
P DI L L NN +T+L G L+ L +L + N N++T + ++ + +NL
Sbjct: 194 PKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLIN---NELTTLPKEIGKLKNLQ 250
Query: 177 -------------------NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+L ++L NQIT++ + L L LYLS NQL L
Sbjct: 251 VLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLA-TLPK 309
Query: 218 DIRGLKRLRTVDLSYNKI 235
+I L+ LR +DLS N+I
Sbjct: 310 EIGQLQNLRELDLSGNQI 327
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N LT+L + L +L L L NN L +L ++G L LQ+L + L LP+
Sbjct: 205 ELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPN 263
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
DI L L + N+IT+L + L LQV + NQ+ + + E L NL + L
Sbjct: 264 DIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPK-EIGQLQNLRELDL 322
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQIT++ + L L L LS NQ+T L +I L+ LR ++L N+I
Sbjct: 323 SGNQITTLPKDIGELQSLRELNLSGNQIT-TLPKEIGKLQSLRELNLGGNQI 373
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
P + +L ++NN T E + +L++ N L +L + L + L L+NN+L +
Sbjct: 41 PTDVRILSLHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTT 100
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L +G L KL+ L + N L LP DI L LY NN++ +L + L L+
Sbjct: 101 LPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLREL 160
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+D NQ+ + +D Q L NL ++L NQ+ ++ + L L L L++N LT L
Sbjct: 161 YLDNNQLKTLPKDIGQ-LQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLT-TLPK 218
Query: 218 DIRGLKRL 225
DI LK L
Sbjct: 219 DIGNLKNL 226
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+L++ N +T+L + L +L L+L+ N+L +L ++G L L+ L + NQ+
Sbjct: 270 SLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITT 329
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP DI L L + N+IT+L + L L+ N+ NQIT + + E +L NL
Sbjct: 330 LPKDIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPK-EIGHLKNLQV 388
Query: 181 ISL 183
+ L
Sbjct: 389 LYL 391
>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 1117
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 5/201 (2%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L++ N IT I T +R L + N +T + + LT+L L L+ N++ +
Sbjct: 65 LKKLIIGKNKITEIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEI 124
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+G L+ LQLL + +NQ+ +P I + L +LY ++N+IT + + LT LQ
Sbjct: 125 PKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLV 184
Query: 159 MDFNQITMVRRDEF-QNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQIT + EF L NL ++ L NQIT + + LT L LY NQ+TE + +
Sbjct: 185 LIGNQITEI--PEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQITE-MPE 241
Query: 218 DIRGLKRLRTVDLSYNKINKF 238
I L L+ ++L N+I +
Sbjct: 242 CIGQLNNLQILNLWKNQITEM 262
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 52 HIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
I E A + +L + +T + + LT+L L L N++ + +G L+ L+ L
Sbjct: 9 EIIEKAAREGVTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKL 68
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+I +N++ +P I + L L N+IT + + LT L+ ++ NQIT + +
Sbjct: 69 IIGKNKITEIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKF- 127
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
L+NL + L NQIT + +S LT L LYL N++TE
Sbjct: 128 IGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEI 170
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N +T + + LT+L L + N++ + G + L+ L+ L + +NQ+ +
Sbjct: 42 LQELDLRENQITEIPECIGQLTNLKKLIIGKNKITEIPGCISQLTNLRFLGLWENQITEI 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I + L L + N+IT + + L LQ+ + NQIT + + L NL ++
Sbjct: 102 PEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLLGLSRNQITEI-PECISQLTNLQNL 160
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L +N+IT + + LT L L L NQ+TE + + I L L+ + L+ N+I +
Sbjct: 161 YLHDNKITEIPECIGQLTNLQNLVLIGNQITE-IPEFIGKLTNLQNLGLTGNQITEI 216
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 43 LLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L L +N IT I E T ++ L + N +T + + LT+L L L N++ +
Sbjct: 160 LYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEF 219
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L+ LQLL NQ+ +P I + L L N+IT + + L LQ+ N+
Sbjct: 220 IGKLTNLQLLYFGGNQITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWK 279
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
NQIT + + L+NL + L +N+IT + + L L L L+ NQ+TE
Sbjct: 280 NQITEI-PECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITEI 331
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
Query: 45 LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
L N IT I E T ++ L+ G N +T + + L +L L L N++ + +G
Sbjct: 208 LTGNQITEIPEFIGKLTNLQLLYFGGNQITEMPECIGQLNNLQILNLWKNQITEMPECIG 267
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L+ LQ+L + +NQ+ +P I + L L ++N+IT + + L LQ ++ NQ
Sbjct: 268 QLNNLQILNLWKNQITEIPECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQ 327
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSL--SGLTKL-AYL 204
IT + + L NL + L NN + + S SGL +L AYL
Sbjct: 328 ITEI-PECIGQLTNLQKLILDNNPLNPVVRSAYQSGLDELKAYL 370
>gi|167389738|ref|XP_001739064.1| leucine-rich repeat containing protein [Entamoeba dispar SAW760]
gi|165897382|gb|EDR24559.1| leucine-rich repeat containing protein, putative [Entamoeba dispar
SAW760]
Length = 833
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE 99
L L L NN IT + + L +GFN L+S + L + L +L ++ N+L +
Sbjct: 331 LCVLDLSNNKITSLPNKPDMSRVNYLSIGFNKLSSFDMDLNKFSSLTFLDISFNKLNLIP 390
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG------------- 146
Q+G L++L+ L I N + LP++ L +L+ + N+ TS
Sbjct: 391 SQIGVLTQLKTLYITGNNISILPNEFSNLISLTNLHCSENKFTSFPNILLNLSNLSKLYI 450
Query: 147 ---------LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
LL L LQ +D + + NL +L+ ++L NN I S+ + +G
Sbjct: 451 SSNYFESIPLLSSLINLQT--LDISNCFLTSCTSIINLSHLEQLNLSNNYI-SIPHNFNG 507
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ L YL LS+N L F+ D+ K L +DLS+N + K
Sbjct: 508 CSSLIYLDLSYNSLQSFV--DVNNFKNLALLDLSFNDLTK 545
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++K+ N L +N+ L LT L ++ LN N+++ + ++ L++L N+L
Sbjct: 50 SLKKISFASNKLREVNDYLFSLTGLEYICLNQNKIEEINNKITELTQLTSFEACANKLHE 109
Query: 121 LPSDIQLFSQLGSLYAN--------NNRITSLDGLLRGLTKLQVFNM--------DFNQI 164
+ L Q L AN + R+T LD L + N FN I
Sbjct: 110 F--NFNLNVQRLDLSANFFTTLNFSSTRLTFLDISQNDLNSFPILNCPNLERINASFNNI 167
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL----TEFLLDDIR 220
++ D+ L +L + L+NN+I S+ + S LT L YL L++N + F + IR
Sbjct: 168 ELL-PDDITILSSLKNCDLRNNKIKSLPKNFSILTALTYLQLANNPINTVPPNFEVMRIR 226
Query: 221 GLKRLRTVDLSYNKINKFGTRNEGK 245
L T +L +N I N K
Sbjct: 227 KLNVNGTQNLLFNPITTLKELNYSK 251
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 41/222 (18%)
Query: 56 NAFP----PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
N+FP P + +++ FNN+ L + + L+ L L NN++KSL L+ L L
Sbjct: 147 NSFPILNCPNLERINASFNNIELLPDDITILSSLKNCDLRNNKIKSLPKNFSILTALTYL 206
Query: 112 VIEQNQLEALPSDIQ---------------LFSQLGSLYANNNRITSLDGL------LRG 150
+ N + +P + + LF+ + +L N +D L L+
Sbjct: 207 QLANNPINTVPPNFEVMRIRKLNVNGTQNLLFNPITTLKELNYSKVGVDVLFDNYSALKN 266
Query: 151 LTKLQVFNMDFNQITMVRR---------DEFQNLHNLDSISLQ-----NNQITSMNSSLS 196
L L V N F +T+ ++ L S+Q NN+I+ ++SS+
Sbjct: 267 LETLDVSNNLFKTLTLTSEKMISCNCSNNKLTTLTIEKGCSIQKLLARNNEISFIDSSIY 326
Query: 197 GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+KL L LS+N++T L + + R+ + + +NK++ F
Sbjct: 327 LNSKLCVLDLSNNKITS--LPNKPDMSRVNYLSIGFNKLSSF 366
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 106/248 (42%), Gaps = 62/248 (25%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHV-GFNNLTSLNNSLRGLTDLNW-------LFL 90
AL L L NN I + N IRKL+V G NL L N + L +LN+ LF
Sbjct: 202 ALTYLQLANNPINTVPPNFEVMRIRKLNVNGTQNL--LFNPITTLKELNYSKVGVDVLFD 259
Query: 91 NNNRLKSLE--------------------------GQLGTLS-----KLQLLVIEQNQLE 119
N + LK+LE +L TL+ +Q L+ N++
Sbjct: 260 NYSALKNLETLDVSNNLFKTLTLTSEKMISCNCSNNKLTTLTIEKGCSIQKLLARNNEIS 319
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDG---------LLRGLTKLQVFNMDFNQITMVRRD 170
+ S I L S+L L +NN+ITSL L G KL F+MD N+
Sbjct: 320 FIDSSIYLNSKLCVLDLSNNKITSLPNKPDMSRVNYLSIGFNKLSSFDMDLNK------- 372
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
F +L LD + N++ + S + LT+L LY++ N ++ L ++ L L +
Sbjct: 373 -FSSLTFLD---ISFNKLNLIPSQIGVLTQLKTLYITGNNIS-ILPNEFSNLISLTNLHC 427
Query: 231 SYNKINKF 238
S NK F
Sbjct: 428 SENKFTSF 435
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 53 IHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLV 112
+HE F +++L + N T+LN S LT +L ++ N L S + L+ +
Sbjct: 107 LHEFNFNLNVQRLDLSANFFTTLNFSSTRLT---FLDISQNDLNSFP--ILNCPNLERIN 161
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRR 169
N +E LP DI + S L + NN+I SL +L LT LQ+ N N T+
Sbjct: 162 ASFNNIELLPDDITILSSLKNCDLRNNKIKSLPKNFSILTALTYLQLANNPIN--TVPPN 219
Query: 170 DEFQNLHNLDSISLQN---NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
E + L+ QN N IT+ L +L Y + + L D+ LK L
Sbjct: 220 FEVMRIRKLNVNGTQNLLFNPITT-------LKELNYSKVG----VDVLFDNYSALKNLE 268
Query: 227 TVDLSYN 233
T+D+S N
Sbjct: 269 TLDVSNN 275
>gi|41282208|ref|NP_956156.2| leucine-rich repeat-containing protein 40 [Danio rerio]
gi|37595350|gb|AAQ94561.1| hypothetical protein FLJ20331 [Danio rerio]
Length = 601
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
TDL L L++N+L+S+ + L L +L I NQL +LP I QL L ++N++T
Sbjct: 80 TDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLT 139
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + LT L+ ++ N I + RD Q L NLD + L NN + + SL+ L L
Sbjct: 140 ELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQ-LVNLDDLDLSNNHLIDIPESLANLQNLV 198
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LS N+L + L I +K LR +D S N++
Sbjct: 199 KLDLSCNKL-KSLPPAISQMKNLRMLDCSRNQMESI 233
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 4/197 (2%)
Query: 40 LITLLLVNNNITHIHENA-FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L LLL +N + I ++ P + L + N L+SL +S+ L L L L++N+L L
Sbjct: 82 LTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTEL 141
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ L+ L+ L ++QN +E +P D+ L L +NN + + L L L +
Sbjct: 142 PSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANLQNLVKLD 201
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N++ + + NL + NQ+ S+ L+ + L LYL HN+L L +
Sbjct: 202 LSCNKLKSL-PPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLR--YLPE 258
Query: 219 IRGLKRLRTVDLSYNKI 235
+ K L+ + N+I
Sbjct: 259 LPCCKTLKELHCGNNQI 275
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 29 LTSDDLKGTPALITLL--LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLN 86
L+ + LK P I+ + L + + + PP + ++ L +N LR L +L
Sbjct: 202 LSCNKLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQME-SLEQLYLRHNKLRYLPELP 260
Query: 87 W------LFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
L NN+++ LE + L L+ L LL + N++++LP +I L L L NN
Sbjct: 261 CCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNN 320
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
I+SL L L KL+ +++ N + +RRD
Sbjct: 321 DISSLPCGLGTLPKLKSLSLEGNPLRAIRRD 351
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 70/269 (26%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSL-----------------NNSLRG 81
+L L L +N + ++ E T+++LH G N + L +N ++
Sbjct: 242 SLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKS 301
Query: 82 LTD-------LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD---------- 124
L + L L L NN + SL LGTL KL+ L +E N L A+ D
Sbjct: 302 LPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELL 361
Query: 125 --------------------------------IQLFSQLGSL-YANNNRITSLDGLLRGL 151
I L +L Y+ + D +L +
Sbjct: 362 KYLRSRVQEPPNGGLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQDASIPDDVLDAV 421
Query: 152 TKLQVFNMDF--NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
V N++F NQ+T V L I+L N++T++ + L +L ++ L +N
Sbjct: 422 DGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCHLKQLMHIDLRNN 481
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L ++ + GL +LR+V LS+N+ F
Sbjct: 482 LLISLPME-LEGLIKLRSVILSFNRFKSF 509
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+ +++GFN LT++ L L + L NN L SL +L L KL+ +++ N+ ++
Sbjct: 449 TLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKS 508
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
P + L ++ ++N++ +D + ++ L++L ++ N I V E N +L
Sbjct: 509 FPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQV-PPELGNCTSLR 567
Query: 180 SISLQNN 186
++ L N
Sbjct: 568 ALMLDGN 574
>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 398
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L L++N+L +L ++G L LQ L + NQL LP +I L
Sbjct: 125 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNL 184
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L N+N++T+L + L LQ ++ NQ+T + +E NL NL ++ L NQ+T++
Sbjct: 185 QKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTL-PEEIWNLQNLQTLDLGRNQLTTL 243
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQLT L ++I L+ L+T+DL N++
Sbjct: 244 PEEIWNLQNLQTLDLGRNQLTT-LPEEIGNLQNLQTLDLEGNQL 286
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L LN+N+L +L ++G L LQ L + +NQL L
Sbjct: 161 LQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTL 220
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ ++ NQ+T + +E NL NL ++
Sbjct: 221 PEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTL-PEEIGNLQNLQTL 279
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L+ NQ+ ++ + L L L L NQLT
Sbjct: 280 DLEGNQLATLPEEIGNLQNLQKLDLEGNQLT 310
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 57 AFPPTIRKLHVG-FNNLTSLNNSLRGLTDLNWLFL-------NNNRLKSLEGQLGTLSKL 108
F TI G + NLT +L+ TD+ +L+L +N+ L +L ++G L L
Sbjct: 82 CFCCTIEAKEKGVYYNLTE---ALQHPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNL 138
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L + NQL LP +I L L ++N++T+L + L LQ N++ NQ+T +
Sbjct: 139 RDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLS 198
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+ E NL NL ++ L NQ+T++ + L L L L NQLT L ++I L+ L+T+
Sbjct: 199 K-EIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTT-LPEEIWNLQNLQTL 256
Query: 229 DLSYNKI 235
DL N++
Sbjct: 257 DLGRNQL 263
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L +L + L +L L L++N+L +L ++G L LQ L + NQL L
Sbjct: 138 LRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTL 197
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I L +L N++T+L + L LQ ++ NQ+T + +E NL NL ++
Sbjct: 198 SKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTL-PEEIWNLQNLQTL 256
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L L NQL L ++I L+ L+ +DL N++
Sbjct: 257 DLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAT-LPEEIGNLQNLQKLDLEGNQL 309
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 25/195 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ N LT+L+ + L +L L L N+L +L ++ L LQ L + +NQL L
Sbjct: 184 LQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTL 243
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L N++T+L + L LQ +++ NQ+ + +E NL NL +
Sbjct: 244 PEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLP-EEIGNLQNLQKL 302
Query: 182 SLQNNQITSMNSSLS-----------------------GLTKLAYLYLSHNQLTEFLLDD 218
L+ NQ+T++ + L KL L L HNQLT L +
Sbjct: 303 DLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTT-LPKE 361
Query: 219 IRGLKRLRTVDLSYN 233
I L++L+ +DL N
Sbjct: 362 IGNLQKLKMLDLGGN 376
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L TL L N +T + E + ++ L +G N LT+L + L +L L L N+L +L
Sbjct: 230 LQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATL 289
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L LQ L +E NQL LP +I +L LY NNR+T+L + L KLQ +
Sbjct: 290 PEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLS 349
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNN 186
+ NQ+T + + E NL L + L N
Sbjct: 350 LGHNQLTTLPK-EIGNLQKLKMLDLGGN 376
>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 379
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+ + L+ L L+L N+L +L ++G L KLQ L + N L LP +I+
Sbjct: 219 NQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQ 278
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L +LY N+IT+ + L LQ N+ FNQ+T + + E L NL ++L+ NQ+
Sbjct: 279 KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQ-EIGQLQNLQELNLEFNQLA 337
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
++ + L KL L L +N + ++ IR L
Sbjct: 338 TLPKEVGQLQKLRKLNLYNNPIASEKIERIRKL 370
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT L + L +L L N+L + ++G LSKLQ L + NQL L
Sbjct: 188 LQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L LY NN + +L + L KLQ ++ NQIT + E L NL +
Sbjct: 248 PEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPK-EIGQLQNLQEL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+T++ + L L L L NQL L ++ L++LR ++L N I
Sbjct: 307 NLGFNQLTTLPQEIGQLQNLQELNLEFNQLAT-LPKEVGQLQKLRKLNLYNNPI 359
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P R L++ + L +L+ + L +L L+LN N+L +L ++G L L
Sbjct: 39 NLTEALQN--PKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q+L + N+L LP +I L L NR+T L + L LQV N+D N++T++
Sbjct: 97 QVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL- 155
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
++ L NL ++L N++T + + L L L L N+LT L + I L+ L+ +
Sbjct: 156 PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLT-ILPEKIGQLQNLQIL 214
Query: 229 DLSYNKINKF 238
+ N++ F
Sbjct: 215 NSQGNQLTTF 224
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT L + L +L L L+ N+L L ++G L LQ+L + NQL
Sbjct: 165 LQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTF 224
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I S+L LY N++T+L + L KLQ + N + + + E + L L ++
Sbjct: 225 PKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPK-EIEQLQKLQTL 283
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ NQIT+ + L L L L NQLT L +I L+ L+ ++L +N++
Sbjct: 284 YLEGNQITTFPKEIGQLQNLQELNLGFNQLTT-LPQEIGQLQNLQELNLEFNQL 336
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT L + L +L L L+ N+L L ++G L LQ+L ++ N+L L
Sbjct: 142 LQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTIL 201
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L L + N++T+ + L+KLQ + NQ+T + +E L L +
Sbjct: 202 PEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTL-PEEIGQLKKLQEL 260
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NN + ++ + L KL LYL NQ+T F +I L+ L+ ++L +N++
Sbjct: 261 YLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTF-PKEIGQLQNLQELNLGFNQL 313
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +KL++ N LT+L + L L L+L NN L++L ++ L KLQ
Sbjct: 223 TFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQT 282
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L +E NQ+ P +I L L N++T+L + L LQ N++FNQ+ + ++
Sbjct: 283 LYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKE 342
Query: 171 EFQNLHNLDSISLQNNQITS 190
Q L L ++L NN I S
Sbjct: 343 VGQ-LQKLRKLNLYNNPIAS 361
>gi|402879350|ref|XP_003903306.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Papio
anubis]
Length = 1662
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-ETLPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLETLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|350412194|ref|XP_003489568.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Bombus impatiens]
Length = 363
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 62 IRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQ--LGTLSKLQLLVIEQNQL 118
++ L++ FN + L ++ GL L WLFL NRL S+E + LQ L ++ N++
Sbjct: 143 LKALYLSFNRIDHLPKHAFDGLPYLKWLFLRYNRLTSIEQDTFVDLTDLLQFLRLDNNRI 202
Query: 119 -EALPSDIQLFSQLGSLYANNNRITS-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+ +P + +L L+ N I+ L G RGL L +D+N +T + + +F +L
Sbjct: 203 GKIVPGSFEKLHELTHLHLEYNLISKILPGTFRGLKALTALFLDYNSLTNIFKGDFDDLD 262
Query: 177 NLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L ++LQ N+I + S L+ L L L N+LT + L +L +DLSYN I
Sbjct: 263 SLQMLNLQFNEIADIEPGSFDNLSSLRKLNLRRNKLTHITVGIFDKLAKLYDLDLSYNFI 322
Query: 236 N 236
+
Sbjct: 323 D 323
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N+I+ + + F+ L +L+ + L NN+++ S L KL LYLS N++ G
Sbjct: 104 NRISTLTKLSFRGLADLEELHLDNNRVSLKPYLFSELKKLKALYLSFNRIDHLPKHAFDG 163
Query: 222 LKRLRTVDLSYNKI 235
L L+ + L YN++
Sbjct: 164 LPYLKWLFLRYNRL 177
>gi|307183120|gb|EFN70037.1| Leucine-rich repeat-containing protein 15 [Camponotus floridanus]
Length = 346
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNR 94
P L+ L L NN I H+ +F + +LH+ +N L SL + + RGL+ L LFLNNN+
Sbjct: 170 PGLLYLWLNNNKIAHVAPGSFAGLTELNRLHLDYNQLESLPSGAFRGLSKLEDLFLNNNQ 229
Query: 95 LKSL-EGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-GLLRGL 151
+ S+ E L L L+ L +++N++ L P Q QL L + N+++ + G GL
Sbjct: 230 ITSISEALLRDLVGLKRLYLQRNEISTLAPGTFQGLLQLEQLRLDGNKLSRIAVGTFVGL 289
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
+KL+ N+ N I + F ++ L + L N +T ++ +SGL
Sbjct: 290 SKLEDLNLSDNNIHTIDNGAFADVVELRILHLSGNNVTEIDKKISGL 336
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSL-NNSLRGLTDL 85
L +G P L L L ++N+ + EN F ++ L + FN + S+ +S GL+ L
Sbjct: 89 LKRGSFRGLPKLERLHL-DDNVVSLSENLFAELGHLQSLSLIFNRINSIPKDSFAGLSSL 147
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL- 144
WL+L N + ++E + + S L L L+ NNN+I +
Sbjct: 148 MWLYLGQNDIPAIEAE--SFSNLN-------------------PGLLYLWLNNNKIAHVA 186
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAY 203
G GLT+L ++D+NQ+ + F+ L L+ + L NNQITS++ + L L L
Sbjct: 187 PGSFAGLTELNRLHLDYNQLESLPSGAFRGLSKLEDLFLNNNQITSISEALLRDLVGLKR 246
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
LYL N+++ +GL +L + L NK+++
Sbjct: 247 LYLQRNEISTLAPGTFQGLLQLEQLRLDGNKLSRIAV 283
>gi|355698275|gb|EHH28823.1| hypothetical protein EGK_19345, partial [Macaca mulatta]
Length = 1612
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 82 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 134
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 135 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 194
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 195 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 253
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 254 PRSLGKLTKLTNLNVDRNHL-ETLPPEIGGCVALSVLSLRDNRL 296
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 33 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 92
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 93 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 152
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 153 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 210
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 211 IGQLKQLSILKVDQNRL 227
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 220 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLETLPPE 279
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 280 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 336
Query: 184 QNNQITSM 191
NQ M
Sbjct: 337 AENQAQPM 344
>gi|351701411|gb|EHB04330.1| Biglycan [Heterocephalus glaber]
Length = 368
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 105 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 164
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 165 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 224
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 225 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 281
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 282 LHLDNNKLSRVPVGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKR-----AYYNGIS 336
Query: 237 KF 238
F
Sbjct: 337 LF 338
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 100 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 158
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 159 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 216
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 217 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 265
>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 588
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ N T+L + L +L L L +N+L +L ++G L L+ L + +N+L
Sbjct: 49 PLNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRL 108
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L +L +N++ +L + L LQ + NQ+T + E L NL
Sbjct: 109 TVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPK-EIGQLENL 167
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++L+ N++T++ + L L L LS NQLT F +I LK+L+ + L N++ F
Sbjct: 168 QELNLKWNRLTALPKEIGQLKNLENLELSENQLTTF-PKEIGQLKKLQDLGLGRNQLTTF 226
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LT+L + L +L L L N+L + ++G L LQ L + N+L ALP +
Sbjct: 308 LDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE 367
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L +L + N++T+ + L KLQ + +N++ ++ + E L NL ++SL
Sbjct: 368 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPK-EIGQLKNLQTLSLS 426
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N++T++ + L L L LS N+L L +I L+ L+ +DL N+ F
Sbjct: 427 YNRLTTLPKEIGQLKNLENLELSENRLA-TLPKEIGQLQNLQKLDLDTNRFATF 479
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L + N LT+ + L L L L+ NRL L ++G L LQ L + N+L L
Sbjct: 374 LENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTL 433
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
P +I L +L + NR+ +L + L LQ ++D N+ ++ + QNL+NLD
Sbjct: 434 PKEIGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQLQNLYNLD 493
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NNQ+T++ ++ L L L L+ NQLT L +I LK L + L N++
Sbjct: 494 ---LGNNQLTALPKEIAQLKNLYDLDLNTNQLT-TLPKEIGQLKNLYNLGLGTNQL 545
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LT+ + L +L L L NNRL +L ++G L L+ L + +NQL P +
Sbjct: 331 LGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKE 390
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +L L + NR+ L + L LQ ++ +N++T + + E L NL+++ L
Sbjct: 391 IGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPK-EIGQLKNLENLELS 449
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N++ ++ + L L L L N+ F +I L+ L +DL N++
Sbjct: 450 ENRLATLPKEIGQLQNLQKLDLDTNRFATF-PKEIGQLQNLYNLDLGNNQL 499
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N LT+ + L +L L L N+ K++ ++G L L L + NQL L
Sbjct: 213 LQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATL 272
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P++I +L L N++T+L + L L ++ NQ+T + ++
Sbjct: 273 PAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLG 332
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L NN++T++ + L L L LS NQLT F +I
Sbjct: 333 LGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTF-PKEI 391
Query: 220 RGLKRLRTVDLSYNKI 235
LK+L+ + LSYN++
Sbjct: 392 GQLKKLQDLGLSYNRL 407
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 25/174 (14%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G N LT+L + L +L L L N+L +L ++G L L L + +NQL
Sbjct: 282 LQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTF 341
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NNR+T+L E L NL+++
Sbjct: 342 PKEIGQLENLQELDLWNNRLTALP------------------------KEIGQLKNLENL 377
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T+ + L KL L LS+N+L L +I LK L+T+ LSYN++
Sbjct: 378 ELSENQLTTFPKEIGQLKKLQDLGLSYNRLV-ILPKEIGQLKNLQTLSLSYNRL 430
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+ + L +L L L NRL +L ++G L L+ L + +NQL
Sbjct: 144 LQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTF 203
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L N++T+ + L LQ+ ++ +NQ V + E L NL +
Sbjct: 204 PKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSK-EIGQLKNLLQL 262
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQ+ ++ + + L KL L L NQLT L +I LK L +DL N++
Sbjct: 263 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLT-TLPKEIGQLKNLYNLDLGTNQL 315
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LT+L + L +L L L+ N+L + ++G L KLQ L + N+L L
Sbjct: 351 LQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVIL 410
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L + NR+T+L + L L+ + N++ + + E L NL +
Sbjct: 411 PKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPK-EIGQLQNLQKL 469
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N+ + + L L L L +NQLT L +I LK L +DL+ N++
Sbjct: 470 DLDTNRFATFPKEIGQLQNLYNLDLGNNQLTA-LPKEIAQLKNLYDLDLNTNQL 522
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +L+ ++ L L+ +L ++ L LQ L ++ NQL LP +I L L
Sbjct: 42 LTKALQNPLNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKL 101
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
NR+T L + L LQ N+ NQ+ + E L NL ++ L NQ+T+
Sbjct: 102 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPV-EIGQLQNLQTLGLSENQLTTFPKE 160
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L L L L N+LT L +I LK L ++LS N++ F
Sbjct: 161 IGQLENLQELNLKWNRLTA-LPKEIGQLKNLENLELSENQLTTF 203
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N LT+L + L +L L L+ NRL +L ++G L LQ L ++ N+
Sbjct: 420 LQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFATF 479
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +L NN++T+L + L L +++ NQ+T + + E L NL ++
Sbjct: 480 PKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTNQLTTLPK-EIGQLKNLYNL 538
Query: 182 SLQNNQITSMNSSLS 196
L NQ+T++ +
Sbjct: 539 GLGTNQLTTLPKEIG 553
>gi|148921804|gb|AAI46322.1| Scribbled homolog (Drosophila) [synthetic construct]
Length = 1655
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|32812252|gb|AAP88017.1|AF240677_1 CRIB1 [Homo sapiens]
gi|20521832|dbj|BAA09768.3| KIAA0147 protein [Homo sapiens]
gi|168274406|dbj|BAG09623.1| scribble protein [synthetic construct]
Length = 1630
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|410042298|ref|XP_003951409.1| PREDICTED: protein scribble homolog isoform 3 [Pan troglodytes]
gi|410257938|gb|JAA16936.1| scribbled homolog [Pan troglodytes]
Length = 1662
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|397497380|ref|XP_003819489.1| PREDICTED: protein scribble homolog isoform 1 [Pan paniscus]
Length = 1637
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|119602604|gb|EAW82198.1| scribbled homolog (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1631
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|18032008|gb|AAL38976.1| scribble [Homo sapiens]
Length = 1630
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|194440856|gb|AAP88018.2|AF271734_1 SCRIB1 variant N1 [Homo sapiens]
Length = 1549
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 52 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 104
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 105 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 164
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 165 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 223
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 224 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 266
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 3 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 62
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 63 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 122
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 123 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 180
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 181 IGQLKQLSILKVDQNRL 197
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 190 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 249
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 250 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 306
Query: 184 QNNQITSM 191
NQ M
Sbjct: 307 AENQAQPM 314
>gi|119602603|gb|EAW82197.1| scribbled homolog (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1656
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|426360967|ref|XP_004047699.1| PREDICTED: protein scribble homolog isoform 2 [Gorilla gorilla
gorilla]
Length = 1668
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|426360965|ref|XP_004047698.1| PREDICTED: protein scribble homolog isoform 1 [Gorilla gorilla
gorilla]
Length = 1643
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|410042296|ref|XP_003951408.1| PREDICTED: protein scribble homolog isoform 2 [Pan troglodytes]
Length = 1608
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 104 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 156
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 157 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 216
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 217 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 275
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 276 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 318
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 55 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 114
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 115 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 174
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 175 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 232
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 233 IGQLKQLSILKVDQNRL 249
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 242 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 301
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 302 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 358
Query: 184 QNNQITSM 191
NQ M
Sbjct: 359 AENQAQPM 366
>gi|410042294|ref|XP_003951407.1| PREDICTED: protein scribble homolog isoform 1 [Pan troglodytes]
gi|410257936|gb|JAA16935.1| scribbled homolog [Pan troglodytes]
Length = 1637
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|397497384|ref|XP_003819491.1| PREDICTED: protein scribble homolog isoform 3 [Pan paniscus]
Length = 1662
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|397497382|ref|XP_003819490.1| PREDICTED: protein scribble homolog isoform 2 [Pan paniscus]
Length = 1608
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 104 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 156
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 157 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 216
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 217 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 275
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 276 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 318
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 55 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 114
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 115 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 174
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 175 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 232
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 233 IGQLKQLSILKVDQNRL 249
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 242 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 301
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 302 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 358
Query: 184 QNNQITSM 191
NQ M
Sbjct: 359 AENQAQPM 366
>gi|392396973|ref|YP_006433574.1| hypothetical protein Fleli_1349 [Flexibacter litoralis DSM 6794]
gi|390528051|gb|AFM03781.1| leucine-rich repeat (LRR) protein [Flexibacter litoralis DSM 6794]
Length = 682
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V + L ++ L L L WL + N L Q+ L L+ L+++ NQ+ +P++
Sbjct: 268 LSVVSSELKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELMLDDNQITTIPNE 327
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +L LY N+I+ L + L L+ + N+ T + NL NL + L
Sbjct: 328 IGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDNKFTSFPM-QITNLENLKELKLS 386
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+I + S +S L KL LYL+HN+ E L +I L L+ + +++NK+
Sbjct: 387 KNKINKLPSQISNLKKLEDLYLNHNKFEE-LPTEILELNELKVLQINHNKL 436
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 30/200 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N + L + + L L L+LN+N+ + L ++ L++L++L I N+LE+L
Sbjct: 380 LKELKLSKNKINKLPSQISNLKKLEDLYLNHNKFEELPTEILELNELKVLQINHNKLESL 439
Query: 122 PSDIQLFSQLGSLYANNNRITS--------------------LDGLLRGLTKLQ---VFN 158
P+ I + +L L NR+TS L L +G+TKL+ + N
Sbjct: 440 PNTISILDKLEELDLGYNRLTSFPLVILKFENLGRLSLEKSELKTLPKGITKLKKIRMLN 499
Query: 159 MDFNQITMVRRD--EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+D N+ + + EFQ + L SL +N+I+S+ + +S L ++ L LS N+L+E L
Sbjct: 500 LDSNRFEVFPIEILEFQKISYL---SLDDNKISSIPNEISKLKRMYVLSLSRNKLSE--L 554
Query: 217 DDIRGLKRLRTVDLSYNKIN 236
+ RL +V L YN+I+
Sbjct: 555 SFLYKFPRLSSVYLDYNRIS 574
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +N L N + L L L L++N++ ++ ++G L KL L +E+N++ LPS
Sbjct: 291 LSFSYNELIEFPNQISKLDSLKELMLDDNQITTIPNEIGNLKKLTRLYLEENKISELPSQ 350
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L L ++N+ TS + L L+ + N+I + + NL L+ + L
Sbjct: 351 ISELQNLERLRLSDNKFTSFPMQITNLENLKELKLSKNKINKL-PSQISNLKKLEDLYLN 409
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+N+ + + + L +L L ++HN+L E L + I L +L +DL YN++ F
Sbjct: 410 HNKFEELPTEILELNELKVLQINHNKL-ESLPNTISILDKLEELDLGYNRLTSF 462
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 30/204 (14%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++KL + N + ++ S+ L +L L ++ L ++ L+KL+ L + QNQL+
Sbjct: 171 SLKKLDIDTNPIKKIHESIANLIELEELDISGMELTEFPLEIVGLTKLRSLNVSQNQLKT 230
Query: 121 LPSDIQLFSQLGSL------YANN-----NRITSLDGL-------------LRGLTKLQV 156
+P DI+ ++L L Y+N +++T L L L L KL+
Sbjct: 231 IPQDIEKLTELEELDIGFNDYSNGSLDAISKLTKLSFLSVVSSELKDISFQLENLKKLEW 290
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF-- 214
+ +N++ ++ L +L + L +NQIT++ + + L KL LYL N+++E
Sbjct: 291 LSFSYNELIEF-PNQISKLDSLKELMLDDNQITTIPNEIGNLKKLTRLYLEENKISELPS 349
Query: 215 LLDDIRGLKRLRTVDLSYNKINKF 238
+ +++ L+RLR LS NK F
Sbjct: 350 QISELQNLERLR---LSDNKFTSF 370
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L + N +T++ N + L L L+L N++ L Q+ L L+ L + N+ +
Sbjct: 310 SLKELMLDDNQITTIPNEIGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDNKFTS 369
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P I L L + N+I L + L KL+ ++ N+ + E L+ L
Sbjct: 370 FPMQITNLENLKELKLSKNKINKLPSQISNLKKLEDLYLNHNKFEELPT-EILELNELKV 428
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ + +N++ S+ +++S L KL L L +N+LT F L
Sbjct: 429 LQINHNKLESLPNTISILDKLEELDLGYNRLTSFPL 464
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Query: 62 IRKLHVGFNNLT-SLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
I KL+ NNLT + + + L L+ L+L + K++ ++ L+ L+ L + N+LE
Sbjct: 79 ITKLYFFGNNLTGKIPSEIGNLIHLDTLYLAVSDFKTIPLEIAKLTNLKYLHLASNKLEH 138
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P + L SL NN+ + + L+ ++D N I + + NL L+
Sbjct: 139 FPPQLLTLKNLTSLSLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKI-HESIANLIELEE 197
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ + ++T + GLTKL L +S NQL + + DI L L +D+ +N
Sbjct: 198 LDISGMELTEFPLEIVGLTKLRSLNVSQNQL-KTIPQDIEKLTELEELDIGFN 249
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 3/178 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N L L L +L L L NN+ + + L+ L I+ N ++ +
Sbjct: 126 LKYLHLASNKLEHFPPQLLTLKNLTSLSLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKI 185
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
I +L L + +T + GLTKL+ N+ NQ+ + +D + L L+ +
Sbjct: 186 HESIANLIELEELDISGMELTEFPLEIVGLTKLRSLNVSQNQLKTIPQD-IEKLTELEEL 244
Query: 182 SLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ N ++ + ++S LTKL++L + ++L + + LK+L + SYN++ +F
Sbjct: 245 DIGFNDYSNGSLDAISKLTKLSFLSVVSSELKDISF-QLENLKKLEWLSFSYNELIEF 301
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 50 ITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
I H + P TI +L +G+N LTS + +L L L + LK+L +
Sbjct: 431 INHNKLESLPNTISILDKLEELDLGYNRLTSFPLVILKFENLGRLSLEKSELKTLPKGIT 490
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L K+++L ++ N+ E P +I F ++ L ++N+I+S+ + L ++ V ++ N+
Sbjct: 491 KLKKIRMLNLDSNRFEVFPIEILEFQKISYLSLDDNKISSIPNEISKLKRMYVLSLSRNK 550
Query: 164 IT 165
++
Sbjct: 551 LS 552
>gi|355390315|ref|NP_056171.3| protein scribble homolog isoform b [Homo sapiens]
Length = 1630
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|355390313|ref|NP_874365.3| protein scribble homolog isoform a [Homo sapiens]
Length = 1655
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|261260101|sp|Q14160.4|SCRIB_HUMAN RecName: Full=Protein scribble homolog; Short=Scribble;
Short=hScrib; AltName: Full=Protein LAP4
Length = 1630
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|149066144|gb|EDM16017.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 1038
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|381145579|gb|AFF59222.1| leucine-rich repeat proteins [Scylla paramamosain]
Length = 630
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 100/173 (57%), Gaps = 2/173 (1%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
++L + ++++ L +S+ +T L +L +N+L +L ++G L LQ L + +N L +LP
Sbjct: 152 QRLDLSNSSISQLPSSMNNVTHLVEFYLYSNKLVTLPPEIGRLVNLQTLGLSENSLTSLP 211
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ QL L +N++T + ++ L L + FN+I +V +E +NL NL ++S
Sbjct: 212 DTLVNLVQLKVLDLRHNKLTEIPDVVYKLPSLITLFLRFNRIRVV-GEEIRNLKNLITLS 270
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ N+I + + + LT+L L ++HN L E L ++I L+T+ L +N++
Sbjct: 271 LRENRIRQLPNGIGELTRLGTLDVAHNHL-EVLTEEIGNCISLQTLHLQHNEL 322
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N L + + + L +L L L NN L+ + +G L KL++L +E+N+LE LP
Sbjct: 455 ELNLGTNQLNKVPDDISCLQNLEVLILTNNCLRKIPSSIGNLRKLRVLDLEENRLEGLPP 514
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +N++++L L L L ++ N ++ + +E L +L+++ L
Sbjct: 515 EIGFLKDLQKLVVQSNQLSALPRALGNLINLTYLSVGENNLSYL-PEEIGTLESLETLYL 573
Query: 184 -QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+N + ++ L+ T L + + + L++ + + G
Sbjct: 574 NENPMLHNLPFELALCTNLQIMSIENCPLSQIPPEIVAG 612
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL++ +N LTSL + ++ L L N+L + + L L++L++ N L +PS
Sbjct: 432 KLNMNYNFLTSLPLDIGSWMNMVELNLGTNQLNKVPDDISCLQNLEVLILTNNCLRKIPS 491
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I +L L NR+ L + L LQ + NQ++ + R NL NL +S+
Sbjct: 492 SIGNLRKLRVLDLEENRLEGLPPEIGFLKDLQKLVVQSNQLSALPR-ALGNLINLTYLSV 550
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQL 211
N ++ + + L L LYL+ N +
Sbjct: 551 GENNLSYLPEEIGTLESLETLYLNENPM 578
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLN 91
P+LITL L N I + E IR L + N + L N + LT L L +
Sbjct: 241 PSLITLFLRFNRIRVVGEE-----IRNLKNLITLSLRENRIRQLPNGIGELTRLGTLDVA 295
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
+N L+ L ++G LQ L ++ N+L LP I L L NR+ S+ L
Sbjct: 296 HNHLEVLTEEIGNCISLQTLHLQHNELVELPQSIGNLRNLTCLGLRYNRLKSVPRSLSRC 355
Query: 152 TKLQVFNMDFNQITMV----------------RRDEFQN--------LHNLDSISLQNNQ 187
L FN++ NQI+ + R+ F + N+ SI+L++NQ
Sbjct: 356 INLDEFNVEGNQISQLPDGLLSSLSNLSSLTLSRNSFNSYPIGGPSQFTNVHSINLEHNQ 415
Query: 188 ITSMNSSLSGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + + K L L +++N LT L DI + ++L N++NK
Sbjct: 416 VDRIPYGIFSRAKHLTKLNMNYNFLTSLPL-DIGSWMNMVELNLGTNQLNKV 466
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ LH+ N L L S+ L +L L L NRLKS+ L L +E NQ+
Sbjct: 311 SLQTLHLQHNELVELPQSIGNLRNLTCLGLRYNRLKSVPRSLSRCINLDEFNVEGNQISQ 370
Query: 121 LP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP + S L SL + N S G T + N++ NQ+ + F +L
Sbjct: 371 LPDGLLSSLSNLSSLTLSRNSFNSYPIGGPSQFTNVHSINLEHNQVDRIPYGIFSRAKHL 430
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+++ N +TS+ + + L L NQL + + DDI L+ L + L+ N + K
Sbjct: 431 TKLNMNYNFLTSLPLDIGSWMNMVELNLGTNQLNK-VPDDISCLQNLEVLILTNNCLRKI 489
Query: 239 GT 240
+
Sbjct: 490 PS 491
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 15 LNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV---GFNN 71
+N+++L T DD+ L L+L NN + I + +RKL V N
Sbjct: 451 MNMVELNLGTNQLNKVPDDISCLQNLEVLILTNNCLRKIPSSIG--NLRKLRVLDLEENR 508
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L + L DL L + +N+L +L LG L L L + +N L LP +I L
Sbjct: 509 LEGLPPEIGFLKDLQKLVVQSNQLSALPRALGNLINLTYLSVGENNLSYLPEEIGTLESL 568
Query: 132 GSLYANNN 139
+LY N N
Sbjct: 569 ETLYLNEN 576
>gi|395740179|ref|XP_003777373.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Pongo
abelii]
Length = 1780
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
gi|229290477|gb|EEN61156.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
Length = 844
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 11/223 (4%)
Query: 30 TSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSL----RGLTDL 85
+S+ +K P I L + N+++ P I K N + + N + GL L
Sbjct: 167 SSNSIKTLPKSIYKLHSSVNVSNNQLRTLPAVIAKGTCSINVIDASRNLIHTLPEGLDKL 226
Query: 86 NWLF---LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRI 141
L L++N+L + +GTL L+ L + NQL+ LP DI L L +L+A++NR+
Sbjct: 227 QRLVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQLDFLPDDICNLRHCLVTLHASHNRL 286
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
T L + L K+ V ++ N++T + +F ++ S+ L +NQ++S+ L+GL KL
Sbjct: 287 TQLPDQIHNLRKIHVLDLSENKLTSLPA-KFGKTDSVVSLDLSHNQLSSL-ERLAGLGKL 344
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
L S+N LT L + + L LR +D+++N+I + + G
Sbjct: 345 ESLNASYNVLTS-LPEGVGSLVSLRVLDIAHNEIKEMPAKIGG 386
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 14/205 (6%)
Query: 45 LVNNNITHIHENAFPPTIRKL-HVGFNNLTSLNNSLRGLTD--------LNWLFLNNNRL 95
LV+ N++H + PPTI L ++ F +L+ +N L L D L L ++NRL
Sbjct: 229 LVSLNLSHNQLDCIPPTIGTLRYLEFLDLS--HNQLDFLPDDICNLRHCLVTLHASHNRL 286
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
L Q+ L K+ +L + +N+L +LP+ + SL ++N+++SL+ L GL KL+
Sbjct: 287 TQLPDQIHNLRKIHVLDLSENKLTSLPAKFGKTDSVVSLDLSHNQLSSLER-LAGLGKLE 345
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
N +N +T + + +L +L + + +N+I M + + GL L + +SHN+L E L
Sbjct: 346 SLNASYNVLTSL-PEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKL-ETL 403
Query: 216 LDDIRGLKRLRTVDLSYNKINKFGT 240
D + + L ++ S+N + T
Sbjct: 404 PDTLGDDQLLSRLNASHNALTALPT 428
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 49 NITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++ H A PP + L N + SL L L +L +NN+L SL
Sbjct: 562 DLAHNELTALPPKLGDFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLPDNF 621
Query: 103 GTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
GTLS+L L + NQL LP+D I + + L L A+ N++T++ + L ++QV N+
Sbjct: 622 GTLSQLTTLDLSANQLPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLYRIQVLNLSA 681
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N I + D ++ + L L LS N L E + + I
Sbjct: 682 NVIKALPGDIWR------------------------MKSLTTLDLSDNML-EGIPETITK 716
Query: 222 LKRLRTVDLSYNKINKF 238
L +++VD+S NK+ F
Sbjct: 717 LPSIKSVDISNNKLRSF 733
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 49 NITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
+I++I P TI K + N L SL + L L L L +N L +L +L
Sbjct: 516 DISNIELTTLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKL 575
Query: 103 GTLSKLQLLVIEQNQLEA-LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
G + L L NQ+E +PS ++L S L L +NN++TSL L++L ++
Sbjct: 576 GDFAYLSHLDTSNNQVEEFMPSLVKLRS-LQYLNFSNNKLTSLPDNFGTLSQLTTLDLSA 634
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQ+ + D L +L ++ NQ+T++ + L ++ L LS N + + L DI
Sbjct: 635 NQLPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLYRIQVLNLSAN-VIKALPGDIWR 693
Query: 222 LKRLRTVDLSYN 233
+K L T+DLS N
Sbjct: 694 MKSLTTLDLSDN 705
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT+L ++ L L NN+L SL L +LQ L + N+L ALP + F+ L
Sbjct: 522 LTTLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYL 581
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L +NN++ L L LQ N N++T + D F L L ++ L NQ+ +
Sbjct: 582 SHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSL-PDNFGTLSQLTTLDLSANQLPEL 640
Query: 192 -NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N + L L L S NQ+T + D+ L R++ ++LS N I
Sbjct: 641 PNDRIDILASLLVLNASGNQVTAIPM-DMPYLYRIQVLNLSANVI 684
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L V N + ++ S+ L L + + N++KSL + S L + N+L+
Sbjct: 91 SLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPKTIHKASALTTINAAGNKLKT 150
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDG----------------------LLRGLTKLQVFN 158
LP +I S + + A++N I +L + +G + V +
Sbjct: 151 LPKNIGSSSSITYIDASSNSIKTLPKSIYKLHSSVNVSNNQLRTLPAVIAKGTCSINVID 210
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
N I + + L L S++L +NQ+ + ++ L L +L LSHNQL +FL DD
Sbjct: 211 ASRNLIHTL-PEGLDKLQRLVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQL-DFLPDD 268
Query: 219 IRGLKR-LRTVDLSYNKINKF 238
I L+ L T+ S+N++ +
Sbjct: 269 ICNLRHCLVTLHASHNRLTQL 289
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 37 TPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
T ++++L L +N ++ + A + L+ +N LTSL + L L L + +N +K
Sbjct: 319 TDSVVSLDLSHNQLSSLERLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIK 378
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALP---SDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+ ++G L L+ + + N+LE LP D QL S+L A++N +T+L +R L
Sbjct: 379 EMPAKIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSRLN---ASHNALTALPTNMRKLRT 435
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLS 196
L ++ N++ + + F L +L + + +N++ + + S
Sbjct: 436 LDALDVSRNKLEAL-PEPFHFLRSLSFLDVSDNKLPVLTAPRS 477
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L + N L+SL L GL L L + N L SL +G+L L++L I N+++
Sbjct: 321 SVVSLDLSHNQLSSLER-LAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKE 379
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P+ I L ++ ++N++ +L L L N N +T + + + L LD+
Sbjct: 380 MPAKIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSRLNASHNALTALPTN-MRKLRTLDA 438
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ + N++ ++ L L++L +S N+L
Sbjct: 439 LDVSRNKLEALPEPFHFLRSLSFLDVSDNKL 469
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L + + L L L + NN ++++ G + L L + NQ+++LP I S
Sbjct: 77 NRLRRVPKGIGRLESLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPKTIHKAS 136
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ-- 187
L ++ A N++ +L + + + + N I + + ++ LH+ S+++ NNQ
Sbjct: 137 ALTTINAAGNKLKTLPKNIGSSSSITYIDASSNSIKTLPKSIYK-LHS--SVNVSNNQLR 193
Query: 188 ----------------------ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
I ++ L L +L L LSHNQL + + I L+ L
Sbjct: 194 TLPAVIAKGTCSINVIDASRNLIHTLPEGLDKLQRLVSLNLSHNQL-DCIPPTIGTLRYL 252
Query: 226 RTVDLSYNKIN 236
+DLS+N+++
Sbjct: 253 EFLDLSHNQLD 263
>gi|148697570|gb|EDL29517.1| scribbled homolog (Drosophila), isoform CRA_d [Mus musculus]
Length = 965
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 190 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 242
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 243 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 302
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 303 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 361
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 362 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 404
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 141 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 200
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 201 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 260
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 261 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 318
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 319 IGQLKQLSILKVDQNRL 335
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 328 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 387
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 388 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 444
Query: 184 QNNQITSM 191
NQ M
Sbjct: 445 AENQAQPM 452
>gi|74178956|dbj|BAE42709.1| unnamed protein product [Mus musculus]
Length = 369
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ ++L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKDHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLDELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHSNNITKVGINDFCPMGFGVKRAY-----YNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I ++ L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKDHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLDELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|194860216|ref|XP_001969534.1| GG10163 [Drosophila erecta]
gi|190661401|gb|EDV58593.1| GG10163 [Drosophila erecta]
Length = 548
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 39 ALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRL 95
AL L L +N + + N+F P +++L + +N ++ + +S GL+ L L+LN N+L
Sbjct: 112 ALTNLDLGHNVLCKLRSNSFGIYPQLQQLDLRYNQISQIEEDSFDGLSHLKHLYLNGNQL 171
Query: 96 KSLEGQL-GTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDGL-LRGLT 152
++G G L +L L ++ N++E + D + + L SL + N ++SL L RGL
Sbjct: 172 AHIDGSFFGGLHRLSSLSLQHNRIEGIEMDSFESNTHLRSLRVDQNLLSSLQFLSQRGLA 231
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQL 211
+L N+ N + + F L + L N IT +N SLSGL L +SHN +
Sbjct: 232 RLVHLNLSNNVVQQLEPSVFSKNFELQDLDLSYNNITKLNKESLSGLDSLERFNISHNYV 291
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
E ++ + L L VD+S+N++
Sbjct: 292 DEIYVESLDSLVALLQVDISFNRL 315
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 107/263 (40%), Gaps = 61/263 (23%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNW 87
++ T L L L N + H+ NAF L H G ++L +L GLT L +
Sbjct: 35 IRNTEHLTQLALSNCTLPHL-ANAFFVRFEHLLHLELQHSGLSDLDDF--ALNGLTKLQY 91
Query: 88 LFLNNNRLKSLEG-------------------------QLGTLSKLQLLVIEQNQLEALP 122
L L++N L SL G +LQ L + NQ+ +
Sbjct: 92 LSLSHNNLSSLRSWSSDPLGALTNLDLGHNVLCKLRSNSFGIYPQLQQLDLRYNQISQIE 151
Query: 123 SD-IQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D S L LY N N++ +DG GL +L ++ N+I + D F++ +L S
Sbjct: 152 EDSFDGLSHLKHLYLNGNQLAHIDGSFFGGLHRLSSLSLQHNRIEGIEMDSFESNTHLRS 211
Query: 181 ISLQNNQITSMNS-SLSGLTKLAYLYLS------------------------HNQLTEFL 215
+ + N ++S+ S GL +L +L LS +N +T+
Sbjct: 212 LRVDQNLLSSLQFLSQRGLARLVHLNLSNNVVQQLEPSVFSKNFELQDLDLSYNNITKLN 271
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + GL L ++S+N +++
Sbjct: 272 KESLSGLDSLERFNISHNYVDEI 294
>gi|229608987|gb|ACQ83320.1| RT02484p [Drosophila melanogaster]
Length = 615
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV--GFNNLTSLN-NSLRGLTDL 85
++S+ L P L TL L N + I N+FP + +H+ FN +T++N +S L +L
Sbjct: 245 ISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNL 304
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+NNRL +L ++ L++L+ L + NQLE S + + +L +N+I +L
Sbjct: 305 TDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWSTFRGLESMKNLQLKSNKIRAL 364
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LA 202
DG+ + K++ ++ NQI+ + R NL L ++L N I+ + T+ L
Sbjct: 365 QDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLG 424
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS+N + EF + L RL+T++L++N++
Sbjct: 425 VLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRL 457
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G L L+L NN+IT I + P +R L + N L ++ NS +L L L+
Sbjct: 228 GLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSF 287
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNNRITSLDGLL 148
N + ++ E TL+ L L + N+L LP I++F QL L N N++
Sbjct: 288 NEITNVNEHSFATLNNLTDLELSNNRLSTLP--IRVFKNLNQLKKLALNFNQLEINWSTF 345
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLS 207
RGL ++ + N+I ++ F +H +++I L NQI+S++ L LTKL +L LS
Sbjct: 346 RGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLS 405
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N ++ +D + L +DLS N IN+F
Sbjct: 406 FNAISRIEVDTWEFTQSLGVLDLSNNAINEF 436
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDE 171
+++N LE +P I L S L L NN ITS+ L L L+ ++ N++ + +
Sbjct: 215 LKRNLLEVIPKFIGL-SGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNS 273
Query: 172 FQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
F +NL + L N+IT++N S + L L L LS+N+L+ + + L +L+ + L
Sbjct: 274 FPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLAL 333
Query: 231 SYNKI 235
++N++
Sbjct: 334 NFNQL 338
>gi|45658729|ref|YP_002815.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|45601973|gb|AAS71452.1| cytoplasmic membrane protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 272
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
++ +G + L SL + +L L L+ N+L SL ++G L KL++L + NQ +LP
Sbjct: 49 RISMGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPK 108
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L + N+ TSL + L L+V N+ NQ+T + + E L NL+ + L
Sbjct: 109 EIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPK-EIGQLQNLERLDL 167
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ TS+ + L KL L L HN+ T F +IR + L+ + LS +++
Sbjct: 168 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIF-PKEIRQQQSLKWLRLSGDQL 218
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N TSL + L +L L L+ N+ SL ++G L L++L + NQL +L
Sbjct: 93 LRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSL 152
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+ TSL + L KL+ N+D N+ T+ + E + +L +
Sbjct: 153 PKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPK-EIRQQQSLKWL 211
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L +Q+ ++ + L L L L N
Sbjct: 212 RLSGDQLKTLPKEILLLQNLQVLRLYSN 239
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LTSL + L +L L L N+ SL ++G L KL+ L ++ N+
Sbjct: 139 LRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIF 198
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I+ L L + +++ +L + L LQV + N ++ + + Q L
Sbjct: 199 PKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQVLRLYSNSFSLKEKQKIQEL 252
>gi|405958960|gb|EKC25038.1| hypothetical protein CGI_10020952 [Crassostrea gigas]
Length = 779
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 107/196 (54%), Gaps = 5/196 (2%)
Query: 42 TLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG 100
TL+L N + + + P ++KL V N+++ + +++ + L +L L++N L L
Sbjct: 179 TLILSKNRLVELPDATVKNPALKKLIVSGNSISHIPDNINNVLTLTYLDLSDNDLTELPN 238
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
Q+G L L L I +N++ LP +I L L L+A++N+I L + L +LQV +
Sbjct: 239 QIGYLKYLHYLNISKNKIGYLPEEITTLHFALTFLHASDNQIKRLPKEIHKLQRLQVLEL 298
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
NQI + D F L N+ + L N++++ + +S L + ++ L+ N LT L +D+
Sbjct: 299 ADNQIETL-PDNFYQLKNIKRLDLSGNKLSTA-AGISKLKSVEHIGLARNSLTA-LPEDL 355
Query: 220 RGLKRLRTVDLSYNKI 235
LK L ++D++ N I
Sbjct: 356 PNLKSLVSIDVTGNYI 371
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L L ++ L +L ++ L NN L +L G + + L+ L N L+ LP+ I
Sbjct: 72 NRLKKLPKTISDLDNLEFIDLRNNSLGALPGTIFKIKALKELQCGNNGLKTLPATINKAP 131
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ----------NLHNLD 179
L LYA NN+I +L + L + ++ N I V++ ++ L L
Sbjct: 132 SLEYLYAQNNKIKALPKTINKCPALVLIDLTENVIRSVKKTIYEVGATLILSKNRLVELP 191
Query: 180 SISLQN----------NQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+++N N I+ + +++ + L YL LS N LTE L + I LK L ++
Sbjct: 192 DATVKNPALKKLIVSGNSISHIPDNINNVLTLTYLDLSDNDLTE-LPNQIGYLKYLHYLN 250
Query: 230 LSYNKI 235
+S NKI
Sbjct: 251 ISKNKI 256
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 98 LEGQLGTLSKLQLLV---IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
LE TLS ++LL + N ++ +P ++ L L +NN + L + + L
Sbjct: 515 LEEVPSTLSHMKLLKKLNMRSNLIKVIPDELCKLRLLEELDVSNNELADLPDSMSNMKNL 574
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ N N+I LH L+ I+L N I + + L K+ L LS+N+L
Sbjct: 575 RKLNASENKIQHFCPG-LCLLHQLEEINLSYNNIMELPENFGELNKVIRLDLSNNELMGL 633
Query: 215 LLDDIRGLKRLRTVDLSYNKINKFGT 240
D L + +D+S N IN T
Sbjct: 634 PEDKWDVLASMLFLDVSKNHINVVPT 659
>gi|297711940|ref|XP_002832569.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 2-like, partial [Pongo abelii]
Length = 336
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 41 ITLL-LVNNNITHIHENA--FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ A F + L + N ++ + S L +L L+NNR+ +
Sbjct: 20 ITLLSLVHNIIPEINAQALQFYSALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITT 79
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 80 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSL 139
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S N +
Sbjct: 140 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIER 199
Query: 214 FLLDDIRGLKRLRTVDLSYNKINK 237
D +RL +DLSYN++ +
Sbjct: 200 ISPDAWEFCQRLSELDLSYNQLTR 223
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 138 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 197
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 198 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 257
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 258 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 317
Query: 233 NKI 235
N I
Sbjct: 318 NAI 320
>gi|330804386|ref|XP_003290176.1| hypothetical protein DICPUDRAFT_36946 [Dictyostelium purpureum]
gi|325079687|gb|EGC33275.1| hypothetical protein DICPUDRAFT_36946 [Dictyostelium purpureum]
Length = 343
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 1/175 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L + N + + L L LN L ++N LKS+ Q+G ++ L+ L++ NQLE+
Sbjct: 138 SLRVLILDHNQFSHFPSHLCELQQLNTLGFSDNALKSIPSQIGQMTGLKKLILSGNQLES 197
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I L L L ++N +TSL L L+ + N++ + + +L S
Sbjct: 198 VPTEISLLKSLTYLDLSSNCLTSLPSEYGKLCGLEYLLLQHNRLRQIPDEIAVGCTSLVS 257
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + NN +T + S++ L+ ++ LYL N+LT L +I L+ + L YNKI
Sbjct: 258 LRVNNNTLTVLPSTIGQLSHMSELYLQENRLTT-LPAEIGSCVLLKKLHLEYNKI 311
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQLEALPS 123
L + N LTSL + L L +L L +NRL+ + ++ + L L + N L LPS
Sbjct: 211 LDLSSNCLTSLPSEYGKLCGLEYLLLQHNRLRQIPDEIAVGCTSLVSLRVNNNTLTVLPS 270
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I S + LY NR+T+L + L+ ++++N+I + +E L+ L+ ++L
Sbjct: 271 TIGQLSHMSELYLQENRLTTLPAEIGSCVLLKKLHLEYNKIISLPDEEMSKLNCLNVLTL 330
Query: 184 QNNQITSMNSSLS 196
+NQ+ + + L+
Sbjct: 331 HDNQLEELPTFLT 343
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 9/194 (4%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLH------VGFNNLTSLNNSLR 80
+ S LK P+ I+ L N HI +N P + L + N+++ S+
Sbjct: 52 IKSCRLKVLPSEISTLGGNLKKLHIEDNKIQEIPNLEPLEQLDELILSNNDISKFQVSIS 111
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L L L L+ N+L ++ +L +LS L++L+++ NQ PS + QL +L ++N
Sbjct: 112 KLPSLRVLDLSYNQLGTIPVRLFSLSSLRVLILDHNQFSHFPSHLCELQQLNTLGFSDNA 171
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+ S+ + +T L+ + NQ+ V E L +L + L +N +TS+ S L
Sbjct: 172 LKSIPSQIGQMTGLKKLILSGNQLESV-PTEISLLKSLTYLDLSSNCLTSLPSEYGKLCG 230
Query: 201 LAYLYLSHNQLTEF 214
L YL L HN+L +
Sbjct: 231 LEYLLLQHNRLRQI 244
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 27/155 (17%)
Query: 88 LFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L + + RLK L ++ TL L+ L IE N+++ +P +++ QL L +NN I+
Sbjct: 50 LTIKSCRLKVLPSEISTLGGNLKKLHIEDNKIQEIP-NLEPLEQLDELILSNNDISKFQV 108
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
+ L L+V ++ +NQ+ + F L+ L L L
Sbjct: 109 SISKLPSLRVLDLSYNQLGTIPVRLF------------------------SLSSLRVLIL 144
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
HNQ + F + L++L T+ S N + ++
Sbjct: 145 DHNQFSHF-PSHLCELQQLNTLGFSDNALKSIPSQ 178
>gi|380027546|ref|XP_003697483.1| PREDICTED: chaoptin-like [Apis florea]
Length = 1240
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+L+ L L NNNI I E+ PP I L + N L S ++L+ L L WL+L N K+L
Sbjct: 189 SLVWLNLDNNNIEEISEDTLPPNIHTLSLNSNLLKSFPSTLKFLKQLTWLYLRGNDFKNL 248
Query: 99 EGQLGTLSKLQLLVIEQNQLEAL--PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
E S L+L+ + +N +E + S ++ ++N++T L + +++
Sbjct: 249 ELPDFQTSDLELVDVSENCIEWIRTSSLANRTLKIKEFNLDSNKLTLLPAGIFDHLEIKR 308
Query: 157 FNMDFNQITMVRRDEFQNLHN-LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++ N I V D F+ L + L+ ++L+NN + S+ ++S L KL+YLYL++N +
Sbjct: 309 IHLSSNSIKNVDDDAFRGLEDMLEYLNLENNDLPSVPGAVSRLRKLSYLYLANNDI 364
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
L SD + P L+T+ L N IT + +N F P +R LH+ FN LT+L+ +++ +
Sbjct: 588 LNSDSIMDCPELVTISLAYNRITKMEKNVFYGLPNLRFLHLEFNKLTTLDLDAISEIGGP 647
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
++ + S+ G ++ L L + N + LP+D + Y
Sbjct: 648 DFALNVSYNAISIINSAGLMNNLTRLDLSFNNISHLPAD--------TFY---------- 689
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 204
G L++ ++ N I ++ F L +L++++++NN+I + S GL L L
Sbjct: 690 ----GTPDLKILDLQSNFIVVLEPGTF-TLRHLETLNIRNNKIEGLRKQSFHGLELLQQL 744
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LS NQ+ + L + R LK LR ++LS NKI
Sbjct: 745 DLSENQIAQLLTEQFRNLKNLRILNLSGNKI 775
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 1 MSRFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAF-- 58
+RF + L+++ +G L +D L + + L L++N +++I + +F
Sbjct: 59 FARFPDVSVSYVAQLDVVG----SGMQSLDNDALTSSVGVEALGLMSNRLSNIGDKSFSG 114
Query: 59 -PPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
++R L + +N L + R L LNWL +++N L SL+G G SK
Sbjct: 115 IADSLRSLDLSYNALEDVPFKVFRDLKKLNWLNMHSNHLTSLDGDWGH-SK--------- 164
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L + + +N I + + L N+D N I + D
Sbjct: 165 ------------DALTNAFFGDNSIIEIPKIFNTFESLVWLNLDNNNIEEISEDTLP--P 210
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
N+ ++SL +N + S S+L L +L +LYL N L D + L VD+S N I
Sbjct: 211 NIHTLSLNSNLLKSFPSTLKFLKQLTWLYLRGNDFKNLELPDFQT-SDLELVDVSENCIE 269
Query: 237 KFGT 240
T
Sbjct: 270 WIRT 273
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 95/239 (39%), Gaps = 73/239 (30%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNN--------- 77
+ S D + L LLL NN +T + + F +++L + FN+LT L++
Sbjct: 416 IQSGDFEWAEDLEILLLRNNILTKLKDETFKGAKKLKELSLSFNHLTELSDDCFIGIEES 475
Query: 78 ------------------SLRGLTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQL 118
+LR L++L WL L+NN +++E + +L+ + +E N+L
Sbjct: 476 LDILELSFAFATDVFPQRALRPLSNLLWLVLDNNNFQTIEATAFYSFQRLRYINLESNRL 535
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP I L +S+ LR + + +N + + F NL L
Sbjct: 536 HYLPERIFL--------------SSVHPELRDV------KLGYNFLEAIPEFSFHNLTEL 575
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
S+ L N+I +NS D I L T+ L+YN+I K
Sbjct: 576 RSLDLTGNRIKILNS-----------------------DSIMDCPELVTISLAYNRITK 611
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 33/212 (15%)
Query: 60 PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEG-------QLGTLSKL--Q 109
P +R + +G+N L ++ S LT+L L L NR+K L +L T+S +
Sbjct: 549 PELRDVKLGYNFLEAIPEFSFHNLTELRSLDLTGNRIKILNSDSIMDCPELVTISLAYNR 608
Query: 110 LLVIEQNQLEALPS--------------DIQLFSQLG----SLYANNNRITSLD--GLLR 149
+ +E+N LP+ D+ S++G +L + N I+ ++ GL+
Sbjct: 609 ITKMEKNVFYGLPNLRFLHLEFNKLTTLDLDAISEIGGPDFALNVSYNAISIINSAGLMN 668
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
LT+L ++ FN I+ + D F +L + LQ+N I + L L L + +N
Sbjct: 669 NLTRL---DLSFNNISHLPADTFYGTPDLKILDLQSNFIVVLEPGTFTLRHLETLNIRNN 725
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
++ GL+ L+ +DLS N+I + T
Sbjct: 726 KIEGLRKQSFHGLELLQQLDLSENQIAQLLTE 757
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 9/201 (4%)
Query: 42 TLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL 98
TL + NN I + + +F +++L + N + L R L +L L L+ N+++SL
Sbjct: 719 TLNIRNNKIEGLRKQSFHGLELLQQLDLSENQIAQLLTEQFRNLKNLRILNLSGNKIRSL 778
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+ +KL++L + N+ +PS +++ L L +N + LD ++L
Sbjct: 779 PRDVFEGTKLEILDLSNNKFTVVPSPSFLEVGYTLRDLNLADNFVDHLDSTAFPTSQLVS 838
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTEFL 215
N+ N++T++ + F +L L S+++ N + + L L LYL++ L +
Sbjct: 839 LNLAHNRLTILPDNSFVSLGKLLSLNVSQNVLQANFKELFHYLPGLRQLYLANCGLKDIP 898
Query: 216 LDDIRGLKRLRTVDLSYNKIN 236
L L L +DLS+N I+
Sbjct: 899 L---LPLMNLNVLDLSFNYID 916
>gi|320167410|gb|EFW44309.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 702
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 106/225 (47%), Gaps = 36/225 (16%)
Query: 36 GTPALIT-LLLVNNNITHIHENAF-------------------PPT-------IRKLHVG 68
G P T LLL NNIT I NAF P T + L +G
Sbjct: 56 GIPTATTQLLLYTNNITSIPANAFASLTRLTILTLDVNQITSIPATAFTGLSALTLLSLG 115
Query: 69 FNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQ 126
N +TS++ S LT L L L+N + S+ LS L + + Q Q+ ++ +
Sbjct: 116 SNPITSMSASAFTDLTKLTQLSLDNTPITSISANAFAGLSALTQMFLYQTQITSISASA- 174
Query: 127 LFSQLGSL---YANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
F+ L SL Y NRITS+ GLTKL ++ +NQIT + + F +L +L +
Sbjct: 175 -FADLRSLQKLYLYGNRITSISANAFTGLTKLAYLDLSYNQITSISANAFADLSSLTDLR 233
Query: 183 LQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
L NQ++S+ + + +GL+ L L L +NQ+T + GL L+
Sbjct: 234 LYFNQMSSLAANTFTGLSALTQLSLLNNQITAISANAFTGLNALK 278
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 10/218 (4%)
Query: 28 PLTS---DDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRG 81
P+TS + G AL + L IT I +AF +++KL++ N +TS++ N+ G
Sbjct: 142 PITSISANAFAGLSALTQMFLYQTQITSISASAFADLRSLQKLYLYGNRITSISANAFTG 201
Query: 82 LTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 139
LT L +L L+ N++ S+ LS L L + NQ+ +L ++ S L L NN
Sbjct: 202 LTKLAYLDLSYNQITSISANAFADLSSLTDLRLYFNQMSSLAANTFTGLSALTQLSLLNN 261
Query: 140 RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSG 197
+IT++ GL L++ + N IT + + F L +L + + NN ITS+++ + +G
Sbjct: 262 QITAISANAFTGLNALKLLYLHNNLITTIAANSFAGLPSLTVLQVYNNTITSISANAFTG 321
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ L L++NQ+T L L+ + L N
Sbjct: 322 LSALTMFLLNYNQITSIPASAFTELTTLQVLALDNNPF 359
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
++++ G L L L N IT I NAF ++ L + FN ++SL N+ GL+ L
Sbjct: 194 ISANAFTGLTKLAYLDLSYNQITSISANAFADLSSLTDLRLYFNQMSSLAANTFTGLSAL 253
Query: 86 NWLFLNNNRLKSLEGQLGT-LSKLQLL--------VIEQNQLEALPSDIQLFSQLGSLYA 136
L L NN++ ++ T L+ L+LL I N LPS L L
Sbjct: 254 TQLSLLNNQITAISANAFTGLNALKLLYLHNNLITTIAANSFAGLPS-------LTVLQV 306
Query: 137 NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
NN ITS+ GL+ L +F +++NQIT + F L L ++L NN T++ L
Sbjct: 307 YNNTITSISANAFTGLSALTMFLLNYNQITSIPASAFTELTTLQVLALDNNPFTTLPPGL 366
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 116 NQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQN 174
N L A+P I + LY NN ITS+ LT+L + +D NQIT + F
Sbjct: 48 NSLTAIPGGIPTATTQLLLYTNN--ITSIPANAFASLTRLTILTLDVNQITSIPATAFTG 105
Query: 175 LHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L L +SL +N ITSM+ S+ + LTKL L L + +T + GL L + L
Sbjct: 106 LSALTLLSLGSNPITSMSASAFTDLTKLTQLSLDNTPITSISANAFAGLSALTQMFLYQT 165
Query: 234 KINK 237
+I
Sbjct: 166 QITS 169
>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
Length = 614
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N LTS+ + T + L L NR++ L Q+GTL+ L+ L + NQL L
Sbjct: 251 LKELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTL 310
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I + L + ++NR+ + ++ LT L N+ N++ + +E +L NL+
Sbjct: 311 PVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSL-PNEIGDLDNLEEF 369
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+NQI ++ SS+ L KL L S NQLT L D I L L +DL+ N
Sbjct: 370 RTHHNQIQAIPSSIGRLLKLKILDASENQLTT-LPDSIGELTSLAHLDLAVN 420
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++LH+ +N LT+L + L +L + L++NRL+ + ++ L+ L L + +N+L +
Sbjct: 296 SLKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPS 355
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L ++N+I ++ + L KL++ + NQ+T + D L +L
Sbjct: 356 LPNEIGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTL-PDSIGELTSLAH 414
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L N + ++ ++ LT L L L N+LT L + L L T+DL N++
Sbjct: 415 LDLAVNNLEALPGTIGNLTALKKLLLYRNKLTILPL-TVGKLTNLETLDLQTNRLTSL 471
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 52 HIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
H A P +I + L N LT+L +S+ LT L L L N L++L G +G L
Sbjct: 373 HNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNL 432
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
+ L+ L++ +N+L LP + + L +L NR+TSL + L L FN+ N +
Sbjct: 433 TALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALV 492
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--LLDDIRGLK 223
+ +L +L +SL+ NQ+ + +S++ L L L LS N+L E L++D+ L+
Sbjct: 493 KL-PPSIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQ 551
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 32/222 (14%)
Query: 40 LITLLLVNNNITHIHENAFPPT------IRKLHVGFNNLTSLNNSLRGLTDLNWL----- 88
L +L +++N I+ PP +RKL + +N+ T L + +T L L
Sbjct: 92 LTSLSVIDNKIS-----VLPPEMGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKADNN 146
Query: 89 --------------FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L+NN+L+SL ++G+++ L L + N L+ +P +I L L
Sbjct: 147 SITHLIPEFGKLDLRLSNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLENLIEL 206
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQ-ITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
NN + + L L++L+ +D N+ + L + L +N++TSM
Sbjct: 207 TLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTSMPV 266
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ T++ L L N++ E L I L L+ + L++N++
Sbjct: 267 VIEAFTQIEVLKLVGNRIEE-LPKQIGTLTSLKELHLAWNQL 307
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 25/194 (12%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL------ 118
L+VG N L SL N + L +L ++N+++++ +G L KL++L +NQL
Sbjct: 346 LNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPDS 405
Query: 119 -----------------EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
EALP I + L L N++T L + LT L+ ++
Sbjct: 406 IGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQT 465
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N++T + NL NL +L N + + S+ L L L L NQL L +
Sbjct: 466 NRLTSLPPG-VGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLA-ILPASMNM 523
Query: 222 LKRLRTVDLSYNKI 235
L L+ + LS N++
Sbjct: 524 LFNLQILSLSANRL 537
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + N LT + + +T+L L L N L +L +G L KL L + N++ LP
Sbjct: 48 KLDLSCNGLTFVPIEVVRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVLPP 107
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
++ L L + N T L ++ +TKL+ D N IT + EF L + L
Sbjct: 108 EMGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKADNNSITHL-IPEFGKL----DLRL 162
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQL 211
NNQ+ S+ + + +T L L L N L
Sbjct: 163 SNNQLESLPTEMGSMTSLTQLKLPFNLL 190
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 20/182 (10%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNN 92
AL LLL N +T P T+ KL + N LTSL + L +L L
Sbjct: 434 ALKKLLLYRNKLT-----ILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQ 488
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
N L L +G+L L L + +NQL LP+ + + L L + NR+ L L+ LT
Sbjct: 489 NALVKLPPSIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLT 548
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
LQV D Q ++ +L +++ +N + ++ + L L +S+NQL
Sbjct: 549 TLQVCQ-DLPQKSLT--------PSLQVLTISDNALETLPVKIGNFRALTQLAVSNNQLK 599
Query: 213 EF 214
E
Sbjct: 600 EL 601
>gi|88999763|emb|CAJ80696.1| Toll-like receptor 22a [Salmo salar]
Length = 971
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 14/218 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLN 86
L+ + L+ + + L NNNI + +F + L +G N L+S+ ++ R ++ L
Sbjct: 339 LSEEFLQSCKQVTEVDLENNNIIQLSAVSFRSMEQLSTLRLGHNMLSSVPDATRNVSTLK 398
Query: 87 WLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL 144
+L L+ N + L L+ L L + NQ+ LP + + +L L +N+I +L
Sbjct: 399 FLDLSFNIILKLGCSDFANLTGLTQLFLFHNQISNLPGCVFKDLKELRILKLGSNKILTL 458
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLA 202
D + GL KL+ +M +N+++ + + +F+ L +L ++ L +NQI S+ + + GL L
Sbjct: 459 NDDFMSGLYKLEYLSMSYNKLSSISKGDFKGLASLKTLLLFDNQIASLEDGAFEGLVNLT 518
Query: 203 YLYLSHNQLTEFLLDDIR-----GLKRLRTVDLSYNKI 235
L L N++T+ DIR GL R RT+D+S N I
Sbjct: 519 ELRLESNKITQI---DIRNTVLTGLPRFRTLDISCNFI 553
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGF--NNLTSLNN-SLRGLTDLNWLFLNNNR 94
P L L L +NNI+ + E + V NN+ L+ S R + L+ L L +N
Sbjct: 324 PTLSLLRLHHNNISSLSEEFLQSCKQVTEVDLENNNIIQLSAVSFRSMEQLSTLRLGHNM 383
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDG-LLRGLT 152
L S+ +S L+ L + N + L SD + L L+ +N+I++L G + + L
Sbjct: 384 LSSVPDATRNVSTLKFLDLSFNIILKLGCSDFANLTGLTQLFLFHNQISNLPGCVFKDLK 443
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQL 211
+L++ + N+I + D L+ L+ +S+ N+++S++ GL L L L NQ+
Sbjct: 444 ELRILKLGSNKILTLNDDFMSGLYKLEYLSMSYNKLSSISKGDFKGLASLKTLLLFDNQI 503
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
GL L + L NKI + RN
Sbjct: 504 ASLEDGAFEGLVNLTELRLESNKITQIDIRN 534
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 46 VNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGT 104
VN+++ H+ R +G + +L + + L+ L L++N + SL E L +
Sbjct: 296 VNSSLVHL---------RLYDIGEERVKALTDIACHIPTLSLLRLHHNNISSLSEEFLQS 346
Query: 105 LSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
++ + +E N + L + + QL +L +N ++S+ R ++ L+ ++ FN
Sbjct: 347 CKQVTEVDLENNNIIQLSAVSFRSMEQLSTLRLGHNMLSSVPDATRNVSTLKFLDLSFNI 406
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGL 222
I + +F NL L + L +NQI+++ + L +L L L N++ D + GL
Sbjct: 407 ILKLGCSDFANLTGLTQLFLFHNQISNLPGCVFKDLKELRILKLGSNKILTLNDDFMSGL 466
Query: 223 KRLRTVDLSYNKIN 236
+L + +SYNK++
Sbjct: 467 YKLEYLSMSYNKLS 480
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN-NRITSLDGL 147
FL N ++ G L +++L +N LE +P +I + + NN ++I D
Sbjct: 46 FLKNCPIR---GNLSDNFNMKVLCYNRN-LEVMPINILWKVSVLDVAMNNISKIGKFD-- 99
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYL 206
+GL+ L++ NM NQI+ V D +L L + L N++T+++ L L L+ L+L
Sbjct: 100 FKGLSNLKILNMFMNQISQVDNDALAHLEALQELYLAYNRLTTLSDHLFQDLANLSLLHL 159
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+N +T + L L+TV+L+ N ++
Sbjct: 160 DNNLITTIGSSSFQLLSSLKTVNLTKNNLH 189
>gi|334326414|ref|XP_003340753.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
[Monodelphis domestica]
Length = 1651
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 64/233 (27%), Positives = 112/233 (48%), Gaps = 3/233 (1%)
Query: 4 FSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTI 62
S DG +L L S + D+ L+TL L N + + + +F +
Sbjct: 117 LSRLPDGFTQLRSLAHLALNDVSLQVLPGDVGNLANLVTLELRENLLKSLPTSLSFLVKL 176
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
+L +G N+L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP
Sbjct: 177 EQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEQLP 236
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+++ + L L + N + L + L +L + +D N++ V + NL +
Sbjct: 237 AEVSGLTLLTDLLLSQNLLERLPDGIGQLKQLSILKVDQNRLCEV-TETIGECENLSELI 295
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N +T++ SL LTKL L + N+L L ++ G L + L N++
Sbjct: 296 LTENMLTALPRSLGKLTKLTNLNVDRNRLGT-LPAEVGGCTSLNVLSLRDNRL 347
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L+ L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQVL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + +SGLT L L LS N L E L D
Sbjct: 204 LDRNQLSTL-PPELGNLRRLVCLDVSENKLEQLPAEVSGLTLLTDLLLSQN-LLERLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N+L LP++
Sbjct: 271 LKVDQNRLCEVTETIGECENLSELILTENMLTALPRSLGKLTKLTNLNVDRNRLGTLPAE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
+ + L L +NR+ SL L G T+L V ++ N++ + F H NL ++ L
Sbjct: 331 VGGCTSLNVLSLRDNRLASLPPELAGTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|434387880|ref|YP_007098491.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
gi|428018870|gb|AFY94964.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
Length = 709
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+LH+G N LTSL ++ LT L+ L L NN++ L G L L+ L + N + LP
Sbjct: 325 ELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPD 384
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
DI +L LY N + L + LT L + ++ NQI+ + D NLHN++ + L
Sbjct: 385 DIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISEL-PDTIGNLHNIEKLDL 443
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N++T + ++S L +++LYL N + + L + + L L+ + + N++
Sbjct: 444 YKNRLTCLPETISNLQSISHLYLQRNYI-KLLPEGMGNLTNLKKLKIWNNRL 494
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ NNL L +S+ LT L+ L L N++ L +G L ++ L + +N+L L
Sbjct: 392 LKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCL 451
Query: 122 PSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P I + LY N I L G L L KL+++N N++ + NL
Sbjct: 452 PETISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWN---NRLRCLPESIGNLAANL 508
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S+ ++NN++ + S+ L L L ++N LT+ + +I + L+T++L+ N +
Sbjct: 509 QSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTD-IPKNIGNITNLKTLNLTKNPL 564
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L L L + N L +LP +I ++L L NN+I L L L+ N++
Sbjct: 317 IGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNG 376
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N I + D+ NL L + L N + + S+ LT L+ L L NQ++E L D I
Sbjct: 377 NNINRL-PDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISE-LPDTIGN 434
Query: 222 LKRLRTVDLSYNKI 235
L + +DL N++
Sbjct: 435 LHNIEKLDLYKNRL 448
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 72/166 (43%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LT L +++ LTDL L + L SL +G LSKL L + ++ LP
Sbjct: 21 LRLGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTKIARLPES 80
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I S L L N I L + L+ L N+ D NL L ++L
Sbjct: 81 IGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLS 140
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
IT++ S+ L +L +L LS + + I LK L + L
Sbjct: 141 AGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQL 186
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L++N++ + ++ +G LSKL L + N+L +LP I L L L N I L
Sbjct: 210 LYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLKCNNIAILPIS 269
Query: 148 LRGLTKLQVFNMDFNQITMVRR-----------------------DEFQNLHNLDSISLQ 184
+ L L N+ N++ R D NL L+ + L
Sbjct: 270 IEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNELHLG 329
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NN +TS+ ++ LTKL+ L L +N++ + L + L LR ++L+ N IN+
Sbjct: 330 NNCLTSLPENIGKLTKLSCLQLINNKIVD-LTKNFGNLVNLRKLNLNGNNINRL 382
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+LH+ + +LTSL S+ L+ L L++ N ++ L +G LS L+ L + N +E LP+
Sbjct: 43 ELHITWFSLTSLPESIGNLSKLTRLYVRNTKIARLPESIGNLSNLKELDLTWNLIEILPT 102
Query: 124 DIQLFSQLGSL-YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
I S L L ++ ++ L + L+KL N+ IT + + NL L ++
Sbjct: 103 SIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLSAGVITTL-PESIGNLDRLKHLN 161
Query: 183 L----QNNQITSMNSSLSGLT-----------------------KLAYLYLSHNQLTEFL 215
L Q QI + SL LT L +LY++ + + +
Sbjct: 162 LSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQLGAQSNLTHLYINSSSIVT-I 220
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ I L +L +DLS+N++N
Sbjct: 221 PESIGNLSKLTHLDLSHNRLNSL 243
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK-LQLLVIEQNQLE 119
+I L++ N + L + LT+L L + NNRL+ L +G L+ LQ L I N+L
Sbjct: 460 SISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNRLRCLPESIGNLAANLQSLKIRNNRLR 519
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
LP I L SL NN +T + + +T L+ N+ N +T
Sbjct: 520 CLPESIGNLVNLNSLDCTNNLLTDIPKNIGNITNLKTLNLTKNPLT 565
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 94 RLKSLEGQLGTLSK--LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD---GLL 148
+L LE + T + +L + NQL LP I + L L+ +TSL G L
Sbjct: 2 QLSELEDIIATAKRERWSILRLGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNL 61
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
LT+L V N ++ + NL NL + L N I + +S+ L+ L +L LSH
Sbjct: 62 SKLTRLYVRNTKIARLP----ESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSH 117
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L D I L +L ++LS I
Sbjct: 118 ATKLAELPDSIGNLSKLTYLNLSAGVI 144
>gi|418709144|ref|ZP_13269938.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410770480|gb|EKR45699.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456970649|gb|EMG11403.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 407
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ FN LT L + L +L L L NRL L ++G L L +L + NQL L
Sbjct: 216 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTIL 275
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NR + + LQV ++ N++T + +E L NL +
Sbjct: 276 PKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTL-PEEIGQLQNLQKL 334
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L KL L L HNQL L ++I+ LK L+ + L N +
Sbjct: 335 HLSRNQLTTLPKEIGRLQKLESLGLDHNQLAT-LPEEIKQLKNLKKLYLHNNSL 387
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 61 TIRKLHVGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
++RKL +G N T L + L +L L L NRL L ++G L L++L + QN+L
Sbjct: 190 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 249
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLH 176
LP +I L L + N++T L + L LQ N+++N+ ++ +FQNL
Sbjct: 250 TILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQ 309
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LD L N++T++ + L L L+LS NQLT L +I L++L ++ L +N++
Sbjct: 310 VLD---LYQNRLTTLPEEIGQLQNLQKLHLSRNQLTT-LPKEIGRLQKLESLGLDHNQL 364
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T+L +L+ ++ L L+ ++LK L ++G L LQ+L E NQL LP +I L
Sbjct: 41 TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 100
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ NN++T+L + L L+V +++ NQ+T + +E L NL ++L N++ +
Sbjct: 101 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTL-PEEIGKLQNLQELNLFVNRLNILP 159
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L L LYLS N+LT L ++I L+ LR + L
Sbjct: 160 KEIGRLQNLQELYLSLNRLT-ILPEEIGQLESLRKLSL 196
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + + L L + L +L L NN+L +L ++G L LQ L ++ NQL
Sbjct: 50 PNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQL 109
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L+ NNN++T+L + L LQ N+ N++ ++ + E L NL
Sbjct: 110 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPK-EIGRLQNL 168
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYL-SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T + + L L L L N+ L +I L+ L+ + L +N++
Sbjct: 169 QELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRL 226
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 57 AFPPTIRK------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I + L + N LT+L + L +L L L+ N+L +L ++G L KL+
Sbjct: 297 AFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLES 356
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L ++ NQL LP +I+ L LY +NN + S
Sbjct: 357 LGLDHNQLATLPEEIKQLKNLKKLYLHNNSLPS 389
>gi|421087062|ref|ZP_15547903.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421104771|ref|ZP_15565364.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410365081|gb|EKP20476.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430171|gb|EKP74541.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 405
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ FN LT L + L +L L L NRL L ++G L L +L + NQL L
Sbjct: 214 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTIL 273
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NR + + LQV ++ N++T + +E L NL +
Sbjct: 274 PKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTL-PEEIGQLQNLQKL 332
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L KL L L HNQL L ++I+ LK L+ + L N +
Sbjct: 333 HLSRNQLTTLPKEIGRLQKLESLGLDHNQLAT-LPEEIKQLKNLKKLYLHNNPL 385
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 61 TIRKLHVGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
++RKL +G N T L + L +L L L NRL L ++G L L++L + QN+L
Sbjct: 188 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 247
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLH 176
LP +I L L + N++T L + L LQ N+++N+ ++ +FQNL
Sbjct: 248 TILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQ 307
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LD L N++T++ + L L L+LS NQLT L +I L++L ++ L +N++
Sbjct: 308 VLD---LYQNRLTTLPEEIGQLQNLQKLHLSRNQLTT-LPKEIGRLQKLESLGLDHNQL 362
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T+L +L+ ++ L L+ ++LK L ++G L LQ+L E NQL LP +I L
Sbjct: 39 TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 98
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ NN++T+L + L L+V +++ NQ+T + +E L NL ++L N++ +
Sbjct: 99 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTL-PEEIGKLQNLQELNLFVNRLNILP 157
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L L LYLS N+LT L ++I L+ LR + L
Sbjct: 158 KEIGRLQNLQELYLSLNRLT-ILPEEIGQLESLRKLSL 194
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + + L L + L +L L NN+L +L ++G L LQ L ++ NQL
Sbjct: 48 PNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQL 107
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L+ NNN++T+L + L LQ N+ N++ ++ + E L NL
Sbjct: 108 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPK-EIGRLQNL 166
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYL-SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T + + L L L L N+ L +I L+ L+ + L +N++
Sbjct: 167 QELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRL 224
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 57 AFPPTIRK------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I + L + N LT+L + L +L L L+ N+L +L ++G L KL+
Sbjct: 295 AFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLES 354
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L ++ NQL LP +I+ L LY +NN + S
Sbjct: 355 LGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLS 387
>gi|238753349|ref|ZP_04614712.1| Leucine-rich repeat (LRR) protein [Yersinia ruckeri ATCC 29473]
gi|238708302|gb|EEQ00657.1| Leucine-rich repeat (LRR) protein [Yersinia ruckeri ATCC 29473]
Length = 300
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 109/237 (45%), Gaps = 29/237 (12%)
Query: 26 SHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTD 84
S PL LK AL L + NNI I + A +R L +G N + S+ L LT
Sbjct: 53 SFPLQICTLK---ALQVLNISCNNIPAIPVDIAELSALRMLDLGHNQIDSIPAELGDLTH 109
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT-- 142
L +L+L+NN+LKSL L L L L + NQLE +P I S L L NN IT
Sbjct: 110 LEYLYLSNNKLKSLPETLSALRHLVYLNVTDNQLEDIPEAIFSLSTLEELRLYNNAITIL 169
Query: 143 ---------------------SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
S+D + LTKL+V ++ N + + DEF L L +
Sbjct: 170 PQSIGRLQQMQELHLMKNNIESIDKGIASLTKLRVLDISDNCLRQL-PDEFCRLAQLTDV 228
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + NQ++ + + L L L L NQL+ L D L +L+ +DL +N ++
Sbjct: 229 NFRFNQLSQLPDNFGELKNLQTLDLRANQLSA-LPDSFAELNQLKRLDLRWNNFSRL 284
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R++ + NNL S + L L L ++ N + ++ + LS L++L + NQ++++
Sbjct: 41 LREISLYNNNLNSFPLQICTLKALQVLNISCNNIPAIPVDIAELSALRMLDLGHNQIDSI 100
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+++ + L LY +NN++ SL L L L N+ NQ+ + F +L L+ +
Sbjct: 101 PAELGDLTHLEYLYLSNNKLKSLPETLSALRHLVYLNVTDNQLEDIPEAIF-SLSTLEEL 159
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NN IT + S+ L ++ L+L N + E + I L +LR +D+S N + +
Sbjct: 160 RLYNNAITILPQSIGRLQQMQELHLMKNNI-ESIDKGIASLTKLRVLDISDNCLRQL 215
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G + Q+L ++ L ++P + L + NN + S + L LQV N+ N
Sbjct: 13 GVVESKQVLNMDGKGLNSVPESLAARGGLREISLYNNNLNSFPLQICTLKALQVLNISCN 72
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
I + D L L + L +NQI S+ + L LT L YLYLS+N+L L + + L
Sbjct: 73 NIPAIPVD-IAELSALRMLDLGHNQIDSIPAELGDLTHLEYLYLSNNKLKS-LPETLSAL 130
Query: 223 KRLRTVDLSYNKI 235
+ L ++++ N++
Sbjct: 131 RHLVYLNVTDNQL 143
>gi|124004944|ref|ZP_01689787.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123989622|gb|EAY29168.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 384
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
Query: 29 LTSDDLKGTPALITLL-------LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLR 80
L+ + L PA IT L L NN +T + + T +R+L +G N L L +
Sbjct: 176 LSDNQLTNLPAEITELRDLEELNLRNNQLTELPDKVIELTNLRELWLGTNQLVGLPPEIG 235
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L L L+L +N+L++L ++G L L+ L ++ N+L LP++I + L L + NR
Sbjct: 236 QLFSLQNLYLYDNQLENLPLEVGQLVSLRNLYLDNNELLTLPAEIGNLTNLRELVLSYNR 295
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+ +L + L +L+V + NQ+ + +E L NL+ + ++NN+IT + ++ L++
Sbjct: 296 LITLPIRIGELAQLEVLYLQNNQLKRLP-EEIGLLQNLEELYIENNRITHLPEEIAQLSQ 354
Query: 201 LAYLYLSHNQLTEFLLDDIRGL 222
L YLY +N + + IR L
Sbjct: 355 LKYLYAQNNMFSSGEKEKIREL 376
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ N LT L + + LT+L L+L N+L L ++G L LQ L + NQLE L
Sbjct: 194 LEELNLRNNQLTELPDKVIELTNLRELWLGTNQLVGLPPEIGQLFSLQNLYLYDNQLENL 253
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ-ITMVRRDEFQNLHNLDS 180
P ++ L +LY +NN + +L + LT L+ + +N+ IT+ R L L+
Sbjct: 254 PLEVGQLVSLRNLYLDNNELLTLPAEIGNLTNLRELVLSYNRLITLPIR--IGELAQLEV 311
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ LQNNQ+ + + L L LY+ +N++T L ++I L +L+ + Y + N F +
Sbjct: 312 LYLQNNQLKRLPEEIGLLQNLEELYIENNRITH-LPEEIAQLSQLKYL---YAQNNMFSS 367
Query: 241 RNEGK 245
+ K
Sbjct: 368 GEKEK 372
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
N LFL + L L ++ L L++L + NQL LP++I L L NN++T L
Sbjct: 149 NQLFLKHFNLTRLPKEICLLKGLKVLNLSDNQLTNLPAEITELRDLEELNLRNNQLTELP 208
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
+ LT L+ + NQ+ + E L +L ++ L +NQ+ ++ + L L LY
Sbjct: 209 DKVIELTNLRELWLGTNQLVGL-PPEIGQLFSLQNLYLYDNQLENLPLEVGQLVSLRNLY 267
Query: 206 LSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
L +N+L L +I L LR + LSYN++ R
Sbjct: 268 LDNNELLT-LPAEIGNLTNLRELVLSYNRLITLPIR 302
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 49 NITHIHENAFPPTIR--KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N T E P R +L + NLT L + L L L L++N+L +L ++ L
Sbjct: 133 NKTAPPEVILEPYYRGNQLFLKHFNLTRLPKEICLLKGLKVLNLSDNQLTNLPAEITELR 192
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
L+ L + NQL LP + + L L+ N++ L + L LQ + NQ+
Sbjct: 193 DLEELNLRNNQLTELPDKVIELTNLRELWLGTNQLVGLPPEIGQLFSLQNLYLYDNQLEN 252
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ E L +L ++ L NN++ ++ + + LT L L LS+N+L
Sbjct: 253 LPL-EVGQLVSLRNLYLDNNELLTLPAEIGNLTNLRELVLSYNRL 296
>gi|449125388|ref|ZP_21761690.1| hypothetical protein HMPREF9723_01734 [Treponema denticola OTK]
gi|448939357|gb|EMB20274.1| hypothetical protein HMPREF9723_01734 [Treponema denticola OTK]
Length = 652
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 17/220 (7%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
++G + LTS D++G PAL L N +T + P + KL N LTS++ + L
Sbjct: 343 DSGRNDLTSLDVQGLPALKILSCTVNELTSLKVRDLPA-LEKLDCSVNQLTSID--ILEL 399
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L + N+L S+ + L+ L+ L NQL +L D++ + L L +N++T
Sbjct: 400 TALKELNCSLNQLTSI--NILKLTALKELDCSANQLTSL--DVRNLAALEELDCRDNKLT 455
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
SLD +RGL LQ N++T + E Q L L ++ N++TS++ + GLT L
Sbjct: 456 SLD--VRGLNTLQKLYCSENELTSL---EIQGLKTLQKLNCYKNKLTSLD--VQGLTALQ 508
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
+L +N+LT +++GL LR ++ N + + ++
Sbjct: 509 WLNCGYNELTTL---NLKGLHALRDLECFNNNLAELDVQD 545
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 110/216 (50%), Gaps = 17/216 (7%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
+ G + LT +++G AL L +N +T + + ++ L G N LTSL+ S GL
Sbjct: 112 DCGGNRLTELNVQGLTALQKLFCDDNLLTSLDVSDVTA-LQSLSCGENLLTSLDVS--GL 168
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L+ N N+L SL+ Q +L+ LQ L N+L +L ++Q L L+ N+NR+
Sbjct: 169 TGLRELYCNRNQLSSLDVQ--SLTALQDLFCNANKLTSL--NVQDLKVLQRLHCNSNRLA 224
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
LD +R L+ LQ + N++T + + + L + N +T ++ + LT L+
Sbjct: 225 LLD--VRDLSALQELDCVGNELTSL---DVHGVTALWELECSKNMLTLLD--VQSLTSLS 277
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L S NQLT D+R L L +D S NK+
Sbjct: 278 KLDCSANQLTSL---DVRNLAALEELDCSNNKLTAL 310
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 18/180 (10%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQL 118
+++L N LTSL+ + G+T L L + N L L+ Q L +LSKL NQL
Sbjct: 232 SALQELDCVGNELTSLD--VHGVTALWELECSKNMLTLLDVQSLTSLSKLD---CSANQL 286
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+L D++ + L L +NN++T+L ++GL LQ N N++T + E Q L L
Sbjct: 287 TSL--DVRNLAALEELDCSNNKLTAL--YVQGLNALQELNCSENELTSL---EIQGLTAL 339
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + N +TS++ + GL L L + N+LT + D+ L++L D S N++
Sbjct: 340 EVLDSGRNDLTSLD--VQGLPALKILSCTVNELTSLKVRDLPALEKL---DCSVNQLTSI 394
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 116 NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
NQL +L D+ + L L NR+T L+ ++GLT LQ D N +T + + ++
Sbjct: 95 NQLTSL--DVHSLTALHKLDCGGNRLTELN--VQGLTALQKLFCDDNLLTSL---DVSDV 147
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L S+S N +TS++ +SGLT L LY + NQL+ D++ L L+ + + NK+
Sbjct: 148 TALQSLSCGENLLTSLD--VSGLTGLRELYCNRNQLSSL---DVQSLTALQDLFCNANKL 202
Query: 236 NKFGTRN 242
++
Sbjct: 203 TSLNVQD 209
>gi|45656981|ref|YP_001067.1| hypothetical protein LIC11097 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600218|gb|AAS69704.1| cytoplasmic membrane protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|456983452|gb|EMG19761.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 413
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ FN LT L + L +L L L NRL L ++G L L +L + NQL L
Sbjct: 222 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTIL 281
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NR + + LQV ++ N++T + +E L NL +
Sbjct: 282 PKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTL-PEEIGQLQNLQKL 340
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L KL L L HNQL L ++I+ LK L+ + L N +
Sbjct: 341 HLSRNQLTTLPKEIGRLQKLESLGLDHNQLAT-LPEEIKQLKNLKKLYLHNNPL 393
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 61 TIRKLHVGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
++RKL +G N T L + L +L L L NRL L ++G L L++L + QN+L
Sbjct: 196 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 255
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLH 176
LP +I L L + N++T L + L LQ N+++N+ ++ +FQNL
Sbjct: 256 TILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQ 315
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LD L N++T++ + L L L+LS NQLT L +I L++L ++ L +N++
Sbjct: 316 VLD---LYQNRLTTLPEEIGQLQNLQKLHLSRNQLTT-LPKEIGRLQKLESLGLDHNQL 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T+L +L+ ++ L L+ ++LK L ++G L LQ+L E NQL LP +I L
Sbjct: 47 TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 106
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ NN++T+L + L L+V +++ NQ+T + +E L NL ++L N++ +
Sbjct: 107 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTL-PEEIGKLQNLQELNLFVNRLNILP 165
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L L LYLS N+LT L ++I L+ LR + L
Sbjct: 166 KEIGRLQNLQELYLSLNRLT-ILPEEIGQLESLRKLSL 202
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + + L L + L +L L NN+L +L ++G L LQ L ++ NQL
Sbjct: 56 PNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQL 115
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L+ NNN++T+L + L LQ N+ N++ ++ + E L NL
Sbjct: 116 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPK-EIGRLQNL 174
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYL-SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T + + L L L L N+ L +I L+ L+ + L +N++
Sbjct: 175 QELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRL 232
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 57 AFPPTIRK------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I + L + N LT+L + L +L L L+ N+L +L ++G L KL+
Sbjct: 303 AFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLES 362
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L ++ NQL LP +I+ L LY +NN + S
Sbjct: 363 LGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLS 395
>gi|428162976|gb|EKX32074.1| hypothetical protein GUITHDRAFT_44718, partial [Guillardia theta
CCMP2712]
Length = 309
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 82 LTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI--QLFSQLGSLYANN 138
L+ L WLFL+NN+L+SL G LS L L + N+LE+LP+ + +L SQL L +N
Sbjct: 14 LSILIWLFLSNNKLESLPAGIFDRLSILIWLFLSDNKLESLPAGVFDELSSQL-YLCLDN 72
Query: 139 NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
N++ SL G+ GL+ L++ + +N+++ + F L +L + L N + G
Sbjct: 73 NKLESLPAGIFDGLSSLRMLYLSYNKLSCISSKAFTGLSSLSQLDLTGNNLPLPAGIFDG 132
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L+ L YLYL N+L GL L + L N++
Sbjct: 133 LSSLQYLYLEFNKLESLPAGIFDGLSSLTDLWLRNNRL 170
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 41 ITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKS 97
+ L L NN + + F ++R L++ +N L+ +++ + GL+ L+ L L N L
Sbjct: 66 LYLCLDNNKLESLPAGIFDGLSSLRMLYLSYNKLSCISSKAFTGLSSLSQLDLTGNNLPL 125
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD-GLLRGLTKLQ 155
G LS LQ L +E N+LE+LP+ I S L L+ NNR+ L G+ GL+ L
Sbjct: 126 PAGIFDGLSSLQYLYLEFNKLESLPAGIFDGLSSLTDLWLRNNRLECLPAGVFNGLSHLG 185
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG--LTKLAYLYLSHNQLTE 213
+ + N++ + F L L + L +N++ S+ + + ++LA + L +N+L
Sbjct: 186 LLLLANNKLESLPAGIFDRLSILIWLFLSDNKLESLPAGIFDELSSQLAQINLYNNKLES 245
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
+ LR++ LS NK+
Sbjct: 246 LPAGIFNKVSVLRSLHLSNNKL 267
>gi|410919091|ref|XP_003973018.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 3-like [Takifugu rubripes]
Length = 1098
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 29 LTSDDLKGTPAL-------ITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSL 79
LT ++L+ P L TLLL NN I I P + L + N + + +
Sbjct: 92 LTHNELEAIPDLGPRASNITTLLLANNRIAGIFPEQLQPFLALETLDLSNNAIADVRAAS 151
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGT--LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
L LFLNNNR+ SLE T S LQ+L + +N+L +P+ I L L +
Sbjct: 152 FPALPLKNLFLNNNRISSLETGCFTNLSSSLQVLRLNRNRLSTIPAKIFQLPNLQHLELS 211
Query: 138 NNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-L 195
NR+ ++GL GL L+ M N ++ + L N++ + L N +T +N L
Sbjct: 212 RNRVRRVEGLTFHGLHALRSLRMQRNGLSRLMDGALWGLSNMEVLQLDYNNLTEVNKGWL 271
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
GL L L+LSHN ++ D ++L ++LS N +++
Sbjct: 272 YGLLTLQQLHLSHNAISRIQPDAWEFCQKLAELNLSSNHLSRL 314
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
+R L + N L+ L + +L GL+++ L L+ N L + +G L L LQ L + N +
Sbjct: 228 ALRSLRMQRNGLSRLMDGALWGLSNMEVLQLDYNNLTEVNKGWLYGLLTLQQLHLSHNAI 287
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+ D F Q L L ++N ++ L+ GL+ LQ ++ N+++ + F+ L
Sbjct: 288 SRIQPDAWEFCQKLAELNLSSNHLSRLEESSFSGLSLLQELHVGNNRVSFIADGAFRGLS 347
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL + LQ N+I+ MN S L KL L+L NQ+ + GL L+ +DLS
Sbjct: 348 NLQMLDLQKNEISWTIEDMNGPFSALEKLKRLFLQGNQIRSVTKESFSGLDALQHLDLSN 407
Query: 233 NKI 235
N I
Sbjct: 408 NAI 410
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 84/173 (48%), Gaps = 11/173 (6%)
Query: 65 LHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALP 122
L + +NNLT +N L GL L L L++N + ++ KL L + N L L
Sbjct: 256 LQLDYNNLTEVNKGWLYGLLTLQQLHLSHNAISRIQPDAWEFCQKLAELNLSSNHLSRLE 315
Query: 123 -SDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRD---EFQNLHN 177
S S L L+ NNR++ + DG RGL+ LQ+ ++ N+I+ D F L
Sbjct: 316 ESSFSGLSLLQELHVGNNRVSFIADGAFRGLSNLQMLDLQKNEISWTIEDMNGPFSALEK 375
Query: 178 LDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEF---LLDDIRGLKRLR 226
L + LQ NQI S+ S SGL L +L LS+N + IR L+ LR
Sbjct: 376 LKRLFLQGNQIRSVTKESFSGLDALQHLDLSNNAIMSVQANAFSQIRNLQELR 428
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 74/225 (32%)
Query: 88 LFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALP------------------------ 122
L L++NRL L+G L + +L L + N+LEA+P
Sbjct: 66 LDLSHNRLPLLDGALFSSAHRLTELKLTHNELEAIPDLGPRASNITTLLLANNRIAGIFP 125
Query: 123 -------------------SDIQLFS----QLGSLYANNNRITSLD-GLLRGL-TKLQVF 157
+D++ S L +L+ NNNRI+SL+ G L + LQV
Sbjct: 126 EQLQPFLALETLDLSNNAIADVRAASFPALPLKNLFLNNNRISSLETGCFTNLSSSLQVL 185
Query: 158 NMDFNQITM--------------------VRRDE---FQNLHNLDSISLQNNQITS-MNS 193
++ N+++ VRR E F LH L S+ +Q N ++ M+
Sbjct: 186 RLNRNRLSTIPAKIFQLPNLQHLELSRNRVRRVEGLTFHGLHALRSLRMQRNGLSRLMDG 245
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+L GL+ + L L +N LTE + GL L+ + LS+N I++
Sbjct: 246 ALWGLSNMEVLQLDYNNLTEVNKGWLYGLLTLQQLHLSHNAISRI 290
>gi|24215665|ref|NP_713146.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. 56601]
gi|386074857|ref|YP_005989175.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24196830|gb|AAN50164.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458647|gb|AER03192.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 408
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ FN LT L + L +L L L NRL L ++G L L +L + NQL L
Sbjct: 217 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTIL 276
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NR + + LQV ++ N++T + + E L NL +
Sbjct: 277 PKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPK-EIGQLQNLQKL 335
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L KL L L HNQL L ++I+ LK L+ + L N +
Sbjct: 336 HLSRNQLTTLPKEIGRLQKLESLGLDHNQLAT-LPEEIKQLKNLKKLYLHNNPL 388
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 61 TIRKLHVGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
++RKL +G N T L + L +L L L NRL L ++G L L++L + QN+L
Sbjct: 191 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 250
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLH 176
LP +I L L + N++T L + L LQ N+++N+ ++ +FQNL
Sbjct: 251 TILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQ 310
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LD L N++T++ + L L L+LS NQLT L +I L++L ++ L +N++
Sbjct: 311 VLD---LYQNRLTTLPKEIGQLQNLQKLHLSRNQLTT-LPKEIGRLQKLESLGLDHNQL 365
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T+L +L+ ++ L L+ ++LK L ++G L LQ+L E NQL LP +I L
Sbjct: 42 TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 101
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ NN++T+L + L L+V +++ NQ+T + +E L NL ++L N++ +
Sbjct: 102 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTL-PEEIGKLQNLQELNLFVNRLNILP 160
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L L LYLS N+LT L ++I L+ LR + L
Sbjct: 161 KEIGRLQNLQELYLSLNRLT-ILPEEIGQLESLRKLSL 197
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + + L L + L +L L NN+L +L ++G L LQ L ++ NQL
Sbjct: 51 PNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQL 110
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L+ NNN++T+L + L LQ N+ N++ ++ + E L NL
Sbjct: 111 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPK-EIGRLQNL 169
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYL-SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T + + L L L L N+ L +I L+ L+ + L +N++
Sbjct: 170 QELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRL 227
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 57 AFPPTIRK------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I + L + N LT+L + L +L L L+ N+L +L ++G L KL+
Sbjct: 298 AFPKEITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLES 357
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L ++ NQL LP +I+ L LY +NN + S
Sbjct: 358 LGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLS 390
>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 399
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L++ N L +L + L +L L+L+ N+LK+L +G L L L + N L L
Sbjct: 134 LRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTL 193
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI LG L NN +T+L + L LQV + T+ ++ L +L +
Sbjct: 194 PKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGALLTTLP--NDIGYLKSLREL 251
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NQIT++ + L L LYLS NQL L +I L+ LR +DLS N+I
Sbjct: 252 NLSGNQITTLPKDIGQLQNLQVLYLSENQLA-TLPKEIGQLQNLRELDLSGNQI 304
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ N LT+L + L +L L L NN L +L ++G L LQ+L + L LP+
Sbjct: 182 ELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPN 240
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
DI L L + N+IT+L + L LQV + NQ+ + + E L NL + L
Sbjct: 241 DIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPK-EIGQLQNLRELDL 299
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQIT++ + L L L LS NQ+T L +I L+ LR ++L N+I
Sbjct: 300 SGNQITTLPKEIGELQSLRELNLSGNQIT-TLPKEIGKLQSLRELNLGGNQI 350
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
P + +L ++NN T E + +L++ N L +L + L + L L+NN+L +
Sbjct: 41 PTDVRILSLHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTT 100
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L +G L KL+ L + N L LP +I L LY NN++ +L + L L+
Sbjct: 101 LPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLREL 160
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--- 214
+D NQ+ + +D L NL ++L NN +T++ + L L L L +N+LT
Sbjct: 161 YLDGNQLKTLPKD-IGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKE 219
Query: 215 ------------------LLDDIRGLKRLRTVDLSYNKI 235
L +DI LK LR ++LS N+I
Sbjct: 220 IGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQI 258
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R+L++ N +T+L + L +L L+L+ N+L +L ++G L L+ L + NQ+
Sbjct: 247 SLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITT 306
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I L L + N+IT+L + L L+ N+ NQIT + + E +L NL
Sbjct: 307 LPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPK-EIGHLKNLQV 365
Query: 181 ISL 183
+ L
Sbjct: 366 LYL 368
>gi|345493307|ref|XP_001605598.2| PREDICTED: chaoptin-like [Nasonia vitripennis]
Length = 1471
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 28 PLTSDDLKGTPALITLLLVNNNITHIHE---NAFPPTIRKLHVGFNNLTSLNNS-LRGLT 83
P + + P+L L + +N + IHE A P ++++H+ NLT + +
Sbjct: 914 PAVALSAQNVPSLGWLNVTDNPLVRIHEISSEAKYPALQEIHISRTNLTIVTSQDFEAFP 973
Query: 84 DLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRI 141
+L LF++NN + L G +L KL L + N+LE LP + ++ QL L +NR+
Sbjct: 974 ELLHLFMSNNLISRLSPGAFHSLPKLLSLDLSINELEFLPQERLRGLEQLRLLNLTHNRL 1033
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK 200
L+ L LQV ++ +N I V + FQ+L NL + L N ITS+ + + L K
Sbjct: 1034 KDLEDFSPDLKALQVLDLSYNHIGQVSKTTFQHLENLAELHLLGNWITSIAADAFKPLKK 1093
Query: 201 LAYLYLSHNQLTEFLLDDIRGLK 223
L L +S N L L+ R L+
Sbjct: 1094 LRLLDVSKNYLENLPLNAFRPLE 1116
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 60 PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQ 117
P +++L + NN+ + ++ G L+ ++L N ++ L+ + L +L +L L + N
Sbjct: 363 PELKELFLAENNILEIPADAFVGSMSLSVVYLQQNAIRRLDSRGLASLEQLGQLHLSGNF 422
Query: 118 LEALPSDI-QLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+E +P D + L SL + N I L+ G L +L+ + NQIT VRR F L
Sbjct: 423 IERVPRDFFEHCENLSSLSLDGNSIRELELGTFAKLKQLRELRLQDNQITEVRRGVFAPL 482
Query: 176 HNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLT 212
+L + LQNN IT M + +L L L ++ L N L
Sbjct: 483 PSLLELHLQNNAITDMETGALRSLQSLQHVNLQGNLLA 520
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 35/208 (16%)
Query: 40 LITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNN---SLRGLTDLNWLFLNNNR 94
L+++ L +NN+T + N F +RKL + N L + S + + L WL + +N
Sbjct: 876 LVSVDLAHNNLTALPANFFLHSDQLRKLELAGNKLRQIPAVALSAQNVPSLGWLNVTDNP 935
Query: 95 LKSLEGQLGTLSK---LQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLD-GLLR 149
L + ++ + +K LQ + I + L + S D + F +L L+ +NN I+ L G
Sbjct: 936 LVRIH-EISSEAKYPALQEIHISRTNLTIVTSQDFEAFPELLHLFMSNNLISRLSPGAFH 994
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L KL ++ N++ + ++ L GL +L L L+HN
Sbjct: 995 SLPKLLSLDLSINELEFLPQER-----------------------LRGLEQLRLLNLTHN 1031
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+L + L D LK L+ +DLSYN I +
Sbjct: 1032 RLKD-LEDFSPDLKALQVLDLSYNHIGQ 1058
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+L+ L L N I+ I E AF SL +SL TDLN L N RL +
Sbjct: 196 SLLKLNLKANQISKISEYAF--------------ASLEDSL---TDLN-LAENKIRLFPM 237
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL----YANNNRITSLDGLLRGLTKL 154
L L +L L + N++ LP D +S+L L ++NN + R L
Sbjct: 238 TA-LRRLERLTSLRLAWNEISQLPEDG--YSRLDVLNFLDLSSNNFLVVPLNCFRCCPSL 294
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-------------------- 194
+ ++ +N I V +D F +L +L+SI L +N+I ++ +
Sbjct: 295 RTLSLYYNAIESVDKDAFISLIHLESIDLSHNKIVFLDVATFRANQKLRSVDLSHNHVHY 354
Query: 195 ----LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
S L +L L+L+ N + E D G L V L N I + +R
Sbjct: 355 IRGVFSRLPELKELFLAENNILEIPADAFVGSMSLSVVYLQQNAIRRLDSR 405
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 84 DLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNN 139
+L+ L L+ N ++ LE G L +L+ L ++ NQ+ + + F+ L SL + NN
Sbjct: 436 NLSSLSLDGNSIRELELGTFAKLKQLRELRLQDNQITEVRRGV--FAPLPSLLELHLQNN 493
Query: 140 RITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQ---------NLHNLDSISLQNNQIT 189
IT ++ G LR L LQ N+ N + V D FQ +L SI L NN +
Sbjct: 494 AITDMETGALRSLQSLQHVNLQGN-LLAVLGDVFQVTNEPGGASGSSSLISIQLDNNGLG 552
Query: 190 SM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ N SL G + ++L HN+LT R L + + L+ N I++
Sbjct: 553 VLHNDSLRGQASVRIMWLGHNRLTRLQAPLFRDLLLVERLYLTNNSISRI 602
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 32/177 (18%)
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ---LGSLYANNNRITSLDGL 147
NN L S E L L LQ L +E + ALP++I FS+ L + ++N + SL GL
Sbjct: 740 NNFSLISAES-LDGLPSLQQLSLESAHIHALPAEI--FSRNKNLVKVLLSDNMLISLPGL 796
Query: 148 L-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-------------- 192
L L L+ +D N + + F N +++ +SL N+I+ +N
Sbjct: 797 LFLELEVLKELRLDGNHFQKIPYEVFANASSIEQLSLARNRISQVNLFRLRGLKNLRELD 856
Query: 193 ------SSLSG-----LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
SLSG L KL + L+HN LT + +LR ++L+ NK+ +
Sbjct: 857 LRDNSIDSLSGFASANLQKLVSVDLAHNNLTALPANFFLHSDQLRKLELAGNKLRQI 913
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 34/235 (14%)
Query: 36 GTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNN 92
G+ +LI++ L NN + +H ++ ++R + +G N LT L L R L + L+L N
Sbjct: 537 GSSSLISIQLDNNGLGVLHNDSLRGQASVRIMWLGHNRLTRLQAPLFRDLLLVERLYLTN 596
Query: 93 NRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFS---------------------- 129
N + +E + L+ L + N+L + ++ FS
Sbjct: 597 NSISRIEDTAFQPMQALKFLDLSINKLSHV--TVKTFSELHELEELYLSDNGLRRLDAYA 654
Query: 130 -----QLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+L L +NNR+ L D + + ++ N+ I ++ R F+ L+NL ++L
Sbjct: 655 LTALKRLRVLDLSNNRLAGLHDTMFQEGLPIRSLNLRNCSIGLIERGTFRGLNNLYELNL 714
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++N++T+ + L L +SHN + + + GL L+ + L I+
Sbjct: 715 EHNRLTAGALDRLDIPGLRILRISHNNFSLISAESLDGLPSLQQLSLESAHIHAL 769
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 43 LLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSL- 98
L L +N IT + F P ++ +LH+ N +T + +LR L L + L N L L
Sbjct: 464 LRLQDNQITEVRRGVFAPLPSLLELHLQNNAITDMETGALRSLQSLQHVNLQGNLLAVLG 523
Query: 99 --------EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG-LL 148
G S L + ++ N L L +D ++ + + ++ +NR+T L L
Sbjct: 524 DVFQVTNEPGGASGSSSLISIQLDNNGLGVLHNDSLRGQASVRIMWLGHNRLTRLQAPLF 583
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLS 207
R L ++ + N I+ + FQ + L + L N+++ + + S L +L LYLS
Sbjct: 584 RDLLLVERLYLTNNSISRIEDTAFQPMQALKFLDLSINKLSHVTVKTFSELHELEELYLS 643
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N L + LKRLR +DLS N++
Sbjct: 644 DNGLRRLDAYALTALKRLRVLDLSNNRL 671
>gi|395512688|ref|XP_003760567.1| PREDICTED: protein scribble homolog [Sarcophilus harrisii]
Length = 1789
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQVLPG-------DVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLEHLPAEVSGLTLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + NL + L N +T++
Sbjct: 246 TDLLLSQNLLERLPDGIGQLKQLSILKVDQNRLCEV-TEAIGECENLSELILTENMLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N+L L ++ G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNRLGT-LPAEVGGCTSLNVLSLRDNRL 347
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L+ L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQVL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + +SGLT L L LS N L E L D
Sbjct: 204 LDRNQLSTL-PPELGNLRRLVCLDVSENKLEHLPAEVSGLTLLTDLLLSQN-LLERLPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N+L LP++
Sbjct: 271 LKVDQNRLCEVTEAIGECENLSELILTENMLTALPRSLGKLTKLTNLNVDRNRLGTLPAE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
+ + L L +NR+ SL L G T+L V ++ N++ + F H NL ++ L
Sbjct: 331 VGGCTSLNVLSLRDNRLASLPPELAGTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|427736833|ref|YP_007056377.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427371874|gb|AFY55830.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 216
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ ++ L + LT+L L L+ N+L +L ++G L+ L+ L + +N+L +L
Sbjct: 18 LKTLNLARQSIKLLPKEIGQLTNLKVLNLDENQLITLPREIGNLTNLEYLCLSRNKLSSL 77
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS+I L L N+I SL + + LQ +++ N ++ + R E L L S+
Sbjct: 78 PSEIGKLINLEELDLEENQINSLPPEIGKINNLQCLDLESNHLSELPR-EIGQLTRLKSL 136
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L NQ+ + S + LT+L LYL NQLT + +I+ L L ++LS N I+
Sbjct: 137 YLSGNQLNELPSDIGQLTRLHTLYLGGNQLTSLPV-EIKKLTGLIEIELSKNPIS 190
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N + SL + + +L L L +N L L ++G L++L+ L + NQL L
Sbjct: 87 LEELDLEENQINSLPPEIGKINNLQCLDLESNHLSELPREIGQLTRLKSLYLSGNQLNEL 146
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
PSDI ++L +LY N++TSL ++ LT L + N I++
Sbjct: 147 PSDIGQLTRLHTLYLGGNQLTSLPVEIKKLTGLIEIELSKNPISI 191
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 56 NAFPPTIRK------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
N+ PP I K L + N+L+ L + LT L L+L+ N+L L +G L++L
Sbjct: 98 NSLPPEIGKINNLQCLDLESNHLSELPREIGQLTRLKSLYLSGNQLNELPSDIGQLTRLH 157
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L + NQL +LP +I+ + L + + N I+ G+L+ K Q+ N F
Sbjct: 158 TLYLGGNQLTSLPVEIKKLTGLIEIELSKNPISIPLGVLKKSPK-QIINFYF 208
>gi|418704407|ref|ZP_13265281.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410765953|gb|EKR36646.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 288
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 25/174 (14%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ +N LT L N + L +L L LNNN+LK+L ++G L LQ
Sbjct: 137 LQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLQ------------ 184
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
L NNN++ +L + L LQ ++ +NQ ++ +E + L NL +
Sbjct: 185 -----------RLELNNNQLMTLSKGIEQLKNLQRLDLGYNQFKII-PNEIEQLQNLQWL 232
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L NNQ+T+++ + L L LYLS+NQ T L ++I LK L+ ++L+ N++
Sbjct: 233 NLDNNQLTTLSKEIGRLQNLQELYLSYNQFTT-LPEEIGQLKNLQVLELNNNQL 285
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT+L + L +L L L+ N L + ++G L L++L + NQL
Sbjct: 42 PLDVRFLYLNGQKLTTLPKEIGQLKNLYDLNLDENPLGAFPKEIGQLENLRVLELNNNQL 101
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+ P ++ L +LY NNN++ +L + L LQ +++NQ+T++ +E L NL
Sbjct: 102 KTFPKEVGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTIL-PNEIGQLKNL 160
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
++ L NNQ+ +++ + L L L L++NQL L I LK L+ +DL YN+
Sbjct: 161 QALELNNNQLKTLSKEIGQLKNLQRLELNNNQLMT-LSKGIEQLKNLQRLDLGYNQ 215
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + N L +L+ + L +L L L N+ K + ++ L LQ L ++ NQL L
Sbjct: 183 LQRLELNNNQLMTLSKGIEQLKNLQRLDLGYNQFKIIPNEIEQLQNLQWLNLDNNQLTTL 242
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
+I L LY + N+ T+L + L LQV ++ NQ+T+
Sbjct: 243 SKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQVLELNNNQLTIT 288
>gi|456865710|gb|EMF84044.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
LT2116]
Length = 178
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G + LT+L N + L +L L+LN RL +L +G L LQ L + NQL+ L
Sbjct: 4 LQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDNQLKTL 63
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+DI L L+ + N++T+L L L+ N+ NQ+T + + EF L +L +
Sbjct: 64 PNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPK-EFGKLQSLREL 122
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYL 206
+L NQ+T++ + L L LYL
Sbjct: 123 NLSGNQLTTLPKEIGHLKNLQELYL 147
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +L N + L +L L L+ N+L +L + G L L+ L + NQL L
Sbjct: 50 LQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTL 109
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
P + L L + N++T+L + L LQ +D
Sbjct: 110 PKEFGKLQSLRELNLSGNQLTTLPKEIGHLKNLQELYLD 148
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N LT+L L L L L+ N+L +L + G L L+ L + NQL L
Sbjct: 73 LQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTL 132
Query: 122 PSDIQLFSQLGSLYANN 138
P +I L LY ++
Sbjct: 133 PKEIGHLKNLQELYLDD 149
>gi|410451628|ref|ZP_11305630.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410014394|gb|EKO76524.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 350
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
N +L+ D+ L+L +N+L +L ++G L KL+ L + NQ ALP +I L SL
Sbjct: 31 NEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLS 90
Query: 136 ANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+NR+ SL + L LQ ++ +N++ + + E L NL + L +N +T++ +
Sbjct: 91 LESNRLESLPKEIGRLQNLQNLDLIYNRLESLPK-EIGQLQNLKRLYLVDNHLTTLPQEI 149
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L L LYLS+++LT F L +I L+ L+ + LS ++ F
Sbjct: 150 GTLQNLKGLYLSNSRLTTF-LQEIGTLQNLKELSLSSTQLTTF 191
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N L SL + L +L L L NRL+SL ++G L L+ L + N L L
Sbjct: 86 LQSLSLESNRLESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTL 145
Query: 122 PSDIQLFSQLGSLYANNNRITSL---DGLLRGL-------TKLQVFNMDFNQITMVRR-- 169
P +I L LY +N+R+T+ G L+ L T+L F + Q+ +
Sbjct: 146 PQEIGTLQNLKGLYLSNSRLTTFLQEIGTLQNLKELSLSSTQLTTFPKEIGQLQKLEELY 205
Query: 170 ----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL + L +NQ T+ + L KL YL+L HN+LT L ++I
Sbjct: 206 LPSTQLVTLSKEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTT-LSEEI 264
Query: 220 RGLKRLRTVDLSYNKI 235
GL+++ ++L+ N++
Sbjct: 265 VGLQKIVKLNLANNQL 280
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 23/199 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LT+L + L L L L NN+ +L ++GTL LQ L +E N+LE+L
Sbjct: 40 VRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLESL 99
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
P +I L +L NR+ SL + L L+ + N +T + ++
Sbjct: 100 PKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIGTLQNLKGLY 159
Query: 171 -----------EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
E L NL +SL + Q+T+ + L KL LYL QL L +I
Sbjct: 160 LSNSRLTTFLQEIGTLQNLKELSLSSTQLTTFPKEIGQLQKLEELYLPSTQLVT-LSKEI 218
Query: 220 RGLKRLRTVDLSYNKINKF 238
L+ L+ +DLS N+ F
Sbjct: 219 GQLQNLKLLDLSDNQFTTF 237
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L + LT+ + L L L+L + +L +L ++G L L+LL + NQ
Sbjct: 178 LKELSLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSKEIGQLQNLKLLDLSDNQFTTF 237
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L+ +NR+T+L + GL K+ N+ NQ+ + + Q L +L +
Sbjct: 238 PKEIGKLRKLEYLFLEHNRLTTLSEEIVGLQKIVKLNLANNQLRTLPQGIGQ-LQSLKDL 296
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSH 208
+L N T+ + GL L L L +
Sbjct: 297 NLSGNPFTTFPQEIVGLKHLKRLVLEN 323
>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 425
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ + +LT L + L+ L L+L N+L +L ++G L KLQ L + N L L
Sbjct: 257 LRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTL 316
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ +L +L+ +N+IT+ + L LQ N+ FNQ+T + + E L NL +
Sbjct: 317 PKEIEQLQKLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPK-EIGQLQNLQEL 375
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+L+ NQ+ ++ + KL L L +N + ++ IR L
Sbjct: 376 NLKFNQLATLPKEIGQQQKLRKLNLYNNPIASEKIERIRKL 416
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 2/164 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L +L + L +L L LN L L ++G LSKLQ L + NQL LP +I +L
Sbjct: 244 LKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKL 303
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY NN + +L + L KLQ +++ NQIT + E L NL ++L NQ+T++
Sbjct: 304 QELYLGNNPLRTLPKEIEQLQKLQTLHLESNQITTFPK-EIGQLQNLQELNLGFNQLTTL 362
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L L L L NQL L +I ++LR ++L N I
Sbjct: 363 PKEIGQLQNLQELNLKFNQLAT-LPKEIGQQQKLRKLNLYNNPI 405
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 57 AFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I KL +GFN LT+L + L +L L L +N L +L ++G L KLQ
Sbjct: 177 TFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQKLQE 236
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + QL+ LP I L L N +T L + L+KLQ + NQ+T + +
Sbjct: 237 LNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTL-PE 295
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L L + L NN + ++ + L KL L+L NQ+T F +I L+ L+ ++L
Sbjct: 296 EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQITTF-PKEIGQLQNLQELNL 354
Query: 231 SYNKI 235
+N++
Sbjct: 355 GFNQL 359
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P +R L++ + L +L+ + L +L L L N+L +L ++G L L
Sbjct: 39 NLTEALQN--PKDVRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNL 96
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q+L + N+L LP +I L L NR+T L + L LQ N+D N++T++
Sbjct: 97 QVLNLYSNKLTILPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTIL- 155
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+E L L + L+ NQ+T+ + L KL L L NQLT L +++ L+ L+ +
Sbjct: 156 PEEIGQLQKLQILDLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTT-LREEVVQLQNLQIL 214
Query: 229 DLSYNKI 235
+L N +
Sbjct: 215 NLISNPL 221
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 25/191 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL-------------- 110
L++GFN LT+L N + L +L L L +N+L L ++G L LQ+
Sbjct: 76 LNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFNRLTILPDE 135
Query: 111 ---------LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L ++ N+L LP +I +L L N++T+ + L KLQV N+ F
Sbjct: 136 VGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQKLQVLNLGF 195
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
NQ+T +R + Q L NL ++L +N +T++ + L KL L L QL + L I
Sbjct: 196 NQLTTLREEVVQ-LQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQL-KTLPQGIIQ 253
Query: 222 LKRLRTVDLSY 232
L+ LR ++L+Y
Sbjct: 254 LQNLRGLNLNY 264
>gi|326918219|ref|XP_003205388.1| PREDICTED: protein scribble homolog, partial [Meleagris gallopavo]
Length = 725
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N+L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE L
Sbjct: 188 LEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQL 247
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+++ L L + N + + + L +L + +D N++T V + + NL +
Sbjct: 248 PNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEV-TESIGDCENLTEL 306
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N +T++ SL LTKL L + N+LT L +I G L + L N++
Sbjct: 307 ILTENMLTALPKSLGKLTKLTNLNVDRNRLTS-LPAEIGGCANLNVLSLRDNRL 359
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTI---RKL---HVGFNNLTSLNNSLRGLTDL 85
D L P L L L N ++ A PP + R+L V N L L N + GL L
Sbjct: 203 DTLGALPNLRELWLDRNQLS-----ALPPELGNLRRLVCLDVSENKLEQLPNEVSGLVAL 257
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
L L+ N L+ + +G L +L +L ++QN+L + I L L N +T+L
Sbjct: 258 TDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLTELILTENMLTALP 317
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY 205
L LTKL N+D N++T + E NL+ +SL++N++ + + L+ T+L L
Sbjct: 318 KSLGKLTKLTNLNVDRNRLTSLPA-EIGGCANLNVLSLRDNRLALLPAELANTTELHVLD 376
Query: 206 LSHNQL 211
++ N+L
Sbjct: 377 VAGNRL 382
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F ++ N L+ L L L L LN+ L+SL
Sbjct: 96 LVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLGHLALNDVSLQSL 155
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+G L+ L L + +N L+ LP+ + +L L N + L L L L+
Sbjct: 156 PNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 215
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + +SGL L L LS N L E + D
Sbjct: 216 LDRNQLSAL-PPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLLSQN-LLECIPDG 273
Query: 219 IRGLKRLRTVDLSYNKINKF 238
I LK+L + + N++ +
Sbjct: 274 IGQLKQLSILKVDQNRLTEV 293
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 14/133 (10%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N LT + S+ +L L L N L +L LG L+KL L +++N+L +LP++
Sbjct: 283 LKVDQNRLTEVTESIGDCENLTELILTENMLTALPKSLGKLTKLTNLNVDRNRLTSLPAE 342
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH------NL 178
I + L L +NR+ L L T+L V ++ N++ QNL NL
Sbjct: 343 IGGCANLNVLSLRDNRLALLPAELANTTELHVLDVAGNRL--------QNLPFALTNLNL 394
Query: 179 DSISLQNNQITSM 191
++ L NQ M
Sbjct: 395 KALWLAENQSQPM 407
>gi|418731225|ref|ZP_13289638.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410774120|gb|EKR54139.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 297
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
++ +G + L SL + +L L L+ N+L SL ++G L L++L + NQL +LP
Sbjct: 28 RISMGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPK 87
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L + N++ SL + L KL+V N+ NQ T + + E L NL+ + L
Sbjct: 88 EIGQLQNLERLDLDGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPK-EIGQLQNLERLDL 146
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ TS+ + L KL L L HN+ T F +IR + L+ + LS +++
Sbjct: 147 AGNQFTSLPKEIGQLQKLEALNLDHNRFTIF-PKEIRQQQSLKWLRLSGDQL 197
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LTSL + L +L L L+ N+L SL ++G L KL++L + NQ +L
Sbjct: 72 LRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQLASLPKEIGQLQKLRVLNLAGNQFTSL 131
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+ TSL + L KL+ N+D N+ T+ + E + +L +
Sbjct: 132 PKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPK-EIRQQQSLKWL 190
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +Q+ + + L L L+L NQLT L +I L+ L ++L NK+
Sbjct: 191 RLSGDQLKILPKEILLLQNLQSLHLDGNQLTS-LPKEIGQLQNLFELNLQDNKL 243
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N T +R L WL L+ ++LK L ++ L LQ L ++ NQL +L
Sbjct: 164 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKILPKEILLLQNLQSLHLDGNQLTSL 223
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L +N++ +L + L LQV + N ++ + + Q L
Sbjct: 224 PKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQEL 277
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N TSL + L L L L++NR ++ L+ L + +QL+ L
Sbjct: 141 LERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKIL 200
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L SL+ + N++TSL + L L N+ N++ + + E + L NL +
Sbjct: 201 PKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPK-EIEQLQNLQVL 259
Query: 182 SLQNN 186
L +N
Sbjct: 260 RLYSN 264
>gi|387016666|gb|AFJ50452.1| Protein LAP2 [Crotalus adamanteus]
Length = 1450
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLAIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T+V +
Sbjct: 194 NEFTEVPEVLEQLSGLKEFWMDDNKLTLVPGFMGSLKHLTYLDISKNNIETLEEGVSGCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L + L +N + + S+ L KL L + NQL +L D I GL + +D S+N+I
Sbjct: 254 SLQDLLLSSNSLQQLPESIGCLKKLTVLKIDENQLM-YLPDSIGGLIAIEELDCSFNEI 311
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 2/170 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + NN+ +L + G L L L++N L+ L +G L KL +L I++NQL LP
Sbjct: 235 LDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L + N I +L + L+ ++ F D N +T + E N + + L
Sbjct: 295 IGGLIAIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQL-PPEIGNWKYVTVLFLH 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+N++ + + + KL + LS N+L ++L I L+ L + LS N+
Sbjct: 354 SNKLEVLPEEMGDMQKLKVINLSDNRL-KYLPYSILQLQHLTALWLSDNQ 402
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT + + L L +L ++ N +++LE + LQ L++ N L+ LP I
Sbjct: 217 NKLTLVPGFMGSLKHLTYLDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLK 276
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L L + N++ L + GL ++ + FN+I + Q L N+ + + +N +T
Sbjct: 277 KLTVLKIDENQLMYLPDSIGGLIAIEELDCSFNEIETLPSSIGQ-LSNIRTFAADHNFLT 335
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + + L+L N+L E L +++ +++L+ ++LS N++
Sbjct: 336 QLPPEIGNWKYVTVLFLHSNKL-EVLPEEMGDMQKLKVINLSDNRL 380
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLYKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG-LKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT L+ G LK L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLKEFWMDDNKLT--LVPGFMGSLKHLTYLDISKNNI 242
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLYKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLAIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NQL + L + L +L +DL N+
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNE 195
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 23/107 (21%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDL------------------NW-----LFLNNNRLKS 97
I +L FN + +L +S+ L+++ NW LFL++N+L+
Sbjct: 300 AIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNKLEV 359
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L ++G + KL+++ + N+L+ LP I L +L+ ++N+ L
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKYLPYSILQLQHLTALWLSDNQSKPL 406
>gi|301627568|ref|XP_002942945.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Xenopus
(Silurana) tropicalis]
Length = 582
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Query: 78 SLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN 137
S++ LT + L+L N+L+SL ++G L L L + +N L +LP + +L L
Sbjct: 118 SIKDLTQITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLR 177
Query: 138 NNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG 197
+N++ + ++ L+ L + FN+IT V +D + L L +S++ N+I + + +
Sbjct: 178 HNKLREIPAVVYRLSSLTTLFLRFNRITAVEKD-IKTLSKLTMLSIRENKIKHLPAEIGE 236
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L L ++HNQL E L +I ++ +DL +N++
Sbjct: 237 LCNLITLDVAHNQL-EHLPKEIGNCTQITNLDLQHNEL 273
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + FN +T++ ++ L+ L L + N++K L ++G L L L + NQLE LP +
Sbjct: 197 LFLRFNRITAVEKDIKTLSKLTMLSIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKE 256
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L L + +N+++ V R LD ++L+
Sbjct: 257 IGNCTQITNLDLQHNELLDLPDTIGNLCSLSRLGLRYNRLSAVPRS-LAKCSELDELNLE 315
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ LS L K+ L L+ N + + + ++++ +N+INK FG
Sbjct: 316 NNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 375
Query: 242 NEGK 245
+ K
Sbjct: 376 SRAK 379
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I +L++ N L SL + L +L L L+ N L SL L L KL +L + N+L +
Sbjct: 125 ITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKLREI 184
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ + S L +L+ NRIT+++ ++ L+KL + ++ N+I + E L NL ++
Sbjct: 185 PAVVYRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIRENKIKHLPA-EIGELCNLITL 243
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ +NQ+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLCSLSRLGLRYNRLS 297
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
++ +L + +N L+++ SL ++L+ L L NN + +L EG L +L K+ L + +N +
Sbjct: 285 SLSRLGLRYNRLSAVPRSLAKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQ 344
Query: 120 ALP-SDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
+ P FS + SL +NRI + G+ L NM NQ+T + D F +
Sbjct: 345 SYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTS 403
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ ++L NQ+T + +SGL + L LS+N L + L I L++LR +DL NK+
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKK-LPHGIGNLRKLRELDLEENKL 460
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL + L L+NN LK L +G L KL+ L +E+N+LE+
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLES 462
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 521
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 522 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 563
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 37/237 (15%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLN 86
D+K L L + N I H+ P I +L V N L L + T +
Sbjct: 210 DIKTLSKLTMLSIRENKIKHL-----PAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-D 145
L L +N L L +G L L L + N+L A+P + S+L L NN I++L +
Sbjct: 265 NLDLQHNELLDLPDTIGNLCSLSRLGLRYNRLSAVPRSLAKCSELDELNLENNNISTLPE 324
Query: 146 GLLRGLTKLQVF------------------------NMDFNQITMVRRDEFQNLHNLDSI 181
GLL L K+ NM+ N+I + F L +
Sbjct: 325 GLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKL 384
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++++NQ+TS+ T + L L+ NQLT+ + +D+ GL + + LS N + K
Sbjct: 385 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTK-IPEDVSGLVSIEVLILSNNLLKKL 440
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G ++ L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 419 EDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 539 LCSKLSIMSIE 549
>gi|185132838|ref|NP_001117891.1| Toll-like receptor II precursor [Oncorhynchus mykiss]
gi|68687823|emb|CAI48084.1| Toll-like receptor TLR22a2 [Oncorhynchus mykiss]
Length = 969
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSLRGLTDLN 86
L+ + L+ L + + +NNI + E F + L +G N L+S+ + R L L
Sbjct: 337 LSKEFLQSCKQLTEMDVCDNNINQLSELLFRSMEQLSTLKLGHNRLSSMPKATRNLPTLK 396
Query: 87 WLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL 144
L L+ N + L L+ L L + NQ+ LP + Q L L +N+I +L
Sbjct: 397 ILDLSFNIIHKLGCSDFSNLTGLTQLFLFHNQISNLPGCVFQDLKDLRILKLGSNKILTL 456
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLA 202
D + GL KL+ +M +N+++ + + +F+ L +L ++ L +NQI S+ + + GL L
Sbjct: 457 NDDFMSGLHKLEFLSMSYNKLSSISKGDFKGLASLKTLLLFDNQIASLEDGAFEGLVNLT 516
Query: 203 YLYLSHNQLTEFLLDDIR-----GLKRLRTVDLSYNKI 235
L L N++T+ DIR GL LRT+D+S N I
Sbjct: 517 ELRLQSNKITQI---DIRNTVLTGLPHLRTLDISCNYI 551
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 38 PALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNR 94
P L L L +NNI+ + + + ++ V NN+ L+ L R + L+ L L +NR
Sbjct: 322 PTLSLLRLHHNNISVLSKEFLQSCKQLTEMDVCDNNINQLSELLFRSMEQLSTLKLGHNR 381
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLDG-LLRGLT 152
L S+ L L++L + N + L SD + L L+ +N+I++L G + + L
Sbjct: 382 LSSMPKATRNLPTLKILDLSFNIIHKLGCSDFSNLTGLTQLFLFHNQISNLPGCVFQDLK 441
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQL 211
L++ + N+I + D LH L+ +S+ N+++S++ GL L L L NQ+
Sbjct: 442 DLRILKLGSNKILTLNDDFMSGLHKLEFLSMSYNKLSSISKGDFKGLASLKTLLLFDNQI 501
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
GL L + L NKI + RN
Sbjct: 502 ASLEDGAFEGLVNLTELRLQSNKITQIDIRN 532
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLK 96
P+ + +L N+ + ++ P + L+V NN++ + +GL++L L ++ N++
Sbjct: 53 PSNMKVLCEKRNLEVVPKD-IPRKVSVLNVAMNNISKIGKLDFKGLSNLKILNMSRNQIS 111
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQ 155
S++ G+LS LEAL +LG +NR+T+L D L +GL L
Sbjct: 112 SVDD--GSLS----------HLEAL-------QELG---LAHNRLTTLSDHLFQGLANLS 149
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS--SLSGLTKLAYLYLSHNQLTE 213
+ + D N I + FQ L +L +++L N + +M + L L LY+ N+ T
Sbjct: 150 LLHQDNNLIATISSSSFQPLSSLKTVNLTKNNLHNMKEVQPIVQLPHLQELYIGSNRFTS 209
Query: 214 FLLDDIRGLK-RLRTVDLSYNKINKF 238
F +I LR +DLS N + F
Sbjct: 210 FQSQEISNTSIELRLLDLSRNPLGIF 235
>gi|195380798|ref|XP_002049148.1| GJ21421 [Drosophila virilis]
gi|194143945|gb|EDW60341.1| GJ21421 [Drosophila virilis]
Length = 1235
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 6/213 (2%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNN--LTSLNN-SLRGLTDL 85
++S L P L +L L N + + N FP R H+ N+ + S++ + L++L
Sbjct: 270 ISSGALALLPKLKSLDLSKNQLHSVEANVFPRPNRLAHLILNSNEIASVDELAFAALSNL 329
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+NNRL SL G L++L+ L + NQLE S + L L N I L
Sbjct: 330 TDLELSNNRLSSLPVGVFKNLNRLKKLALNYNQLEINWSTFRGLLSLQKLQLKANNIKML 389
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LA 202
DG+ + ++ +D N I+ + R NL L +SL NN IT + T+ L
Sbjct: 390 QDGVFHVMRSIESIELDHNGISSLSRQGLFNLTKLHHLSLSNNSITRIELDTWEFTQSLE 449
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LSHN ++EF + LKRL+T++L++NK+
Sbjct: 450 SLDLSHNFISEFKAQHLECLKRLKTLNLAHNKL 482
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 6/213 (2%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G AL L L NN I I A P ++ L + N L S+ N L L LN+
Sbjct: 253 GLTALRQLNLANNRIQRISSGALALLPKLKSLDLSKNQLHSVEANVFPRPNRLAHLILNS 312
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLRG 150
N + S+ E LS L L + N+L +LP + + ++L L N N++ RG
Sbjct: 313 NEIASVDELAFAALSNLTDLELSNNRLSSLPVGVFKNLNRLKKLALNYNQLEINWSTFRG 372
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHN 209
L LQ + N I M++ F + +++SI L +N I+S++ L LTKL +L LS+N
Sbjct: 373 LLSLQKLQLKANNIKMLQDGVFHVMRSIESIELDHNGISSLSRQGLFNLTKLHHLSLSNN 432
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
+T LD + L ++DLS+N I++F ++
Sbjct: 433 SITRIELDTWEFTQSLESLDLSHNFISEFKAQH 465
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQ 163
L +L L +++NQL+ +P + L + L L NNRI + G L L KL+ ++ NQ
Sbjct: 232 LPELHKLTLKRNQLDVMPMFVGL-TALRQLNLANNRIQRISSGALALLPKLKSLDLSKNQ 290
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+ V + F + L + L +N+I S++ + + L+ L L LS+N+L+ + + L
Sbjct: 291 LHSVEANVFPRPNRLAHLILNSNEIASVDELAFAALSNLTDLELSNNRLSSLPVGVFKNL 350
Query: 223 KRLRTVDLSYNKI 235
RL+ + L+YN++
Sbjct: 351 NRLKKLALNYNQL 363
>gi|156367061|ref|XP_001627238.1| predicted protein [Nematostella vectensis]
gi|156214142|gb|EDO35138.1| predicted protein [Nematostella vectensis]
Length = 254
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
LT L WL L NN++ +L L ++ L L +E N+L+ P ++ S+L L+ N+N +
Sbjct: 82 LTRLRWLNLQNNQITNLPSSLADMNGLCYLNLEANELKIFPEEVSQLSRLRVLHLNSNNL 141
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
+L + L L++ + N++ V D F + H L +S++NN + +S LT L
Sbjct: 142 RALPESFKLLNHLRILYLKDNKLR-VLPDWFASFHCLAYLSMENNDLVCFPGEISKLTSL 200
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L LS N + E L D I+ L L+ + L NKI K
Sbjct: 201 EVLILSGNSIRE-LPDSIKELVNLKELFLGRNKIRK 235
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L + L+ L L LN+N L++L L+ L++L ++ N+L LP
Sbjct: 111 LNLEANELKIFPEEVSQLSRLRVLHLNSNNLRALPESFKLLNHLRILYLKDNKLRVLPDW 170
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
F L L NN + G + LT L+V + N I + D + L NL + L
Sbjct: 171 FASFHCLAYLSMENNDLVCFPGEISKLTSLEVLILSGNSIRELP-DSIKELVNLKELFLG 229
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHN 209
N+I + S++ L KL LYL N
Sbjct: 230 RNKIRKLPPSITKLEKLQVLYLQEN 254
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
LT L L L+ N + + + L L L + + LE LP+ + QL L NN I
Sbjct: 13 LTQLQVLNLSGNHITNFPYRFFMLRFLTELYLRNDFLEFLPAQVCTLVQLEVLDLANNFI 72
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
+L LT+L+ N+ NNQIT++ SSL+ + L
Sbjct: 73 RTLPYSSGHLTRLRWLNLQ------------------------NNQITNLPSSLADMNGL 108
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
YL L N+L F +++ L RLR + L+ N +
Sbjct: 109 CYLNLEANELKIF-PEEVSQLSRLRVLHLNSNNL 141
>gi|410940571|ref|ZP_11372375.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410784315|gb|EKR73302.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 354
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N + SL + GL +L L NN K+ G++ L LQ L + +NQL ++
Sbjct: 158 LQTLKLSDNQIVSLPKEIEGLQELKEFILGNNHFKNFPGEVLQLKNLQKLNLSENQLVSI 217
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L + N+IT L + L LQ ++ NQ+T + + E L NL +
Sbjct: 218 PKEIGQLQNLRDLVLDRNQITILPTEVLQLQNLQELHLSENQLTSLSK-EIDQLKNLQWL 276
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL+NN++T++ + L L L L +NQLT L +I LK L+ ++L N +
Sbjct: 277 SLRNNRLTTLPKEIGQLKNLQRLELGNNQLTN-LPKEIGQLKGLQRLELDSNPL 329
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + N L ++ + L L L L+ NRL ++ ++G L LQ L + NQ+ +
Sbjct: 111 SLKNLDLFRNQLVTVPKEVLLLQTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIVS 170
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I+ +L NN + G + L LQ N+ NQ+ + + E L NL
Sbjct: 171 LPKEIEGLQELKEFILGNNHFKNFPGEVLQLKNLQKLNLSENQLVSIPK-EIGQLQNLRD 229
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQIT + + + L L L+LS NQLT L +I LK L+ + L N++
Sbjct: 230 LVLDRNQITILPTEVLQLQNLQELHLSENQLTS-LSKEIDQLKNLQWLSLRNNRL 283
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + F NLT+ + L +L L L N L +L ++ L LQ L + N+L +L
Sbjct: 43 VRILDLSFQNLTTFPKEIGQLKNLQKLDLGGNELTALSKEIVQLQNLQELSLHSNKLTSL 102
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I+ L +L N++ ++ + L L+ N+ N+++ + + E L NL ++
Sbjct: 103 PKEIEQLRSLKNLDLFRNQLVTVPKEVLLLQTLEKLNLSLNRLSTIPK-EVGQLKNLQTL 161
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQI S+ + GL +L L +N F ++ LK L+ ++LS N++
Sbjct: 162 KLSDNQIVSLPKEIEGLQELKEFILGNNHFKNF-PGEVLQLKNLQKLNLSENQL 214
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 8/191 (4%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
FP I +KL +G N LT+L+ + L +L L L++N+L SL ++ L L+
Sbjct: 55 TFPKEIGQLKNLQKLDLGGNELTALSKEIVQLQNLQELSLHSNKLTSLPKEIEQLRSLKN 114
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + +NQL +P ++ L L L + NR++++ + L LQ + NQI + +
Sbjct: 115 LDLFRNQLVTVPKEVLLLQTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIVSLPK- 173
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E + L L L NN + + L L L LS NQL + +I L+ LR + L
Sbjct: 174 EIEGLQELKEFILGNNHFKNFPGEVLQLKNLQKLNLSENQLVS-IPKEIGQLQNLRDLVL 232
Query: 231 SYNKINKFGTR 241
N+I T
Sbjct: 233 DRNQITILPTE 243
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N LTSL+ + L +L WL L NNRL +L ++G L LQ L + NQL L
Sbjct: 250 LQELHLSENQLTSLSKEIDQLKNLQWLSLRNNRLTTLPKEIGQLKNLQRLELGNNQLTNL 309
Query: 122 PSDIQLFSQLGSLYANNNRITS 143
P +I L L ++N ++S
Sbjct: 310 PKEIGQLKGLQRLELDSNPLSS 331
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N +T L + L +L L L+ N+L SL ++ L LQ L + N+L L
Sbjct: 227 LRDLVLDRNQITILPTEVLQLQNLQELHLSENQLTSLSKEIDQLKNLQWLSLRNNRLTTL 286
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L NN++T+L + L LQ +D N ++ +++ + L
Sbjct: 287 PKEIGQLKNLQRLELGNNQLTNLPKEIGQLKGLQRLELDSNPLSSKEKEKIRKL 340
>gi|31127089|gb|AAH52857.1| Biglycan [Mus musculus]
Length = 369
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IHE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +Y N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYPHSNNITKVGINDFCPMGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + E L KLQ L I +N L +P ++
Sbjct: 101 NDVSELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|421113331|ref|ZP_15573775.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|422005173|ref|ZP_16352370.1| hypothetical protein LSS_16811 [Leptospira santarosai serovar
Shermani str. LT 821]
gi|410801105|gb|EKS07279.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|417256187|gb|EKT85625.1| hypothetical protein LSS_16811 [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 312
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N + L +L WL N NRLK L +LG L L +L + N+L+AL
Sbjct: 120 LKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELKAL 179
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS L SL N NR L L L++ + NQ+ + +E L L +
Sbjct: 180 PSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFL-PEEIGTLDKLRVL 238
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L+ NQ+ + S + L L LYL NQLT L ++I L+ L+ +DL
Sbjct: 239 FLEGNQLKQIPSGIEKLQNLESLYLQENQLTT-LPEEIGFLQNLKELDLQ 287
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++G N +TSL + L +L L L++NRL SL ++G L L++L + +N++ L
Sbjct: 51 LKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPVEIGNLKNLEILTLYRNRISVL 110
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE-FQNLHNLDS 180
P L LY + N+ + L L+ +DFN+ + E L NL+
Sbjct: 111 PKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEW--LDFNENRLKELPERLGQLQNLNI 168
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++ ++ SS S L L L L++N+ F ++ LK L ++L+ N++
Sbjct: 169 LYLLGNELKALPSSFSELQSLKSLNLNYNRFQVF-PKELISLKNLEILELTGNQL 222
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + +L S ++ L +L L L N++ SL ++G L L+ L + N+L
Sbjct: 25 PNVVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRL 84
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+LP +I L L NRI+ L L L++ + N+ +E L NL
Sbjct: 85 TSLPVEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKF-PEEILQLQNL 143
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + N++ + L L L LYL N+L L L+ L++++L+YN+ F
Sbjct: 144 EWLDFNENRLKELPERLGQLQNLNILYLLGNELKA-LPSSFSELQSLKSLNLNYNRFQVF 202
>gi|38173753|gb|AAH60689.1| Scrib protein [Mus musculus]
Length = 929
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP ++ + L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N +T++
Sbjct: 246 TDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLTAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PHSLGKLTKLTNLNVDRNHL-EVLPPEIGGCVALSVLSLRDNRL 347
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + L GL L L LS N L + L +
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQN-LLQRLPEG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LE LP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ R F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL---RSLPFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|195488328|ref|XP_002092267.1| GE11761 [Drosophila yakuba]
gi|194178368|gb|EDW91979.1| GE11761 [Drosophila yakuba]
Length = 1202
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 28/215 (13%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV--GFNNLTSLN-NSLRGLTDL 85
++S+ L P L TL L N + I N+FP +H+ FN +T++N +S L +L
Sbjct: 253 ISSEALAALPLLRTLDLSRNQLHTIELNSFPKPNSLVHLILSFNEITNVNEHSFAALNNL 312
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L LNNNRL +L ++ L++L+ L + NQLE S
Sbjct: 313 TDLELNNNRLSTLPIRVFKNLNRLKKLALNFNQLEINWST-------------------- 352
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAY 203
RGL ++ + N+I ++ F +HN+++I L NQI+S++ L LTKL +
Sbjct: 353 ---FRGLESMKNLQLKSNKIRALQDGVFYVMHNIETIDLAMNQISSLSRQGLFNLTKLRH 409
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LS+N ++ +D + L +DLS N IN+F
Sbjct: 410 LNLSYNAISRIEVDTWEFTQSLEVLDLSNNAINEF 444
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Query: 88 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L NN+L ++ LS L + +++N LE +P I L S L L NN ITS+
Sbjct: 197 LHLANNKLNDTTVLEIRNLSNLTKVSLKRNLLEVIPKFIGL-SGLKHLVLANNHITSISS 255
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
L L L+ ++ NQ+ + + F ++L + L N+IT++N S + L L L
Sbjct: 256 EALAALPLLRTLDLSRNQLHTIELNSFPKPNSLVHLILSFNEITNVNEHSFAALNNLTDL 315
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L++N+L+ + + L RL+ + L++N++
Sbjct: 316 ELNNNRLSTLPIRVFKNLNRLKKLALNFNQL 346
>gi|293395817|ref|ZP_06640099.1| leucine-rich repeat protein [Serratia odorifera DSM 4582]
gi|291421754|gb|EFE95001.1| leucine-rich repeat protein [Serratia odorifera DSM 4582]
Length = 296
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 50 ITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
+THI A + +RK+ + N LT + T+L L ++ N+L L Q+G L +L
Sbjct: 24 LTHIDPLALQGSQLRKISLYDNRLTIFPQQIFDHTNLQVLNISCNQLTQLPQQIGLLRQL 83
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
++L NQ +P +I +QL LY ++N + L L L +L+ N+ N++ V
Sbjct: 84 EMLDFGHNQATQIPDEIGQLTQLRYLYLSDNHFSDLPHTLGQLGELRYLNVTDNRLAAVP 143
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
+Q L NL + L NN ITS+ +++ LT+L L+L N+L+E L I L L +
Sbjct: 144 TAVWQ-LGNLQELRLYNNAITSLPAAIGRLTRLRELHLMKNRLSE-LPATIAELTALNVL 201
Query: 229 DLSYNKINKF 238
D++ N I +
Sbjct: 202 DVANNAIERL 211
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L G N T + + + LT L +L+L++N L LG L +L+ L + N+L A+
Sbjct: 83 LEMLDFGHNQATQIPDEIGQLTQLRYLYLSDNHFSDLPHTLGQLGELRYLNVTDNRLAAV 142
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ + L L NN ITSL + LT+L+ ++ N+++ + L L+ +
Sbjct: 143 PTAVWQLGNLQELRLYNNAITSLPAAIGRLTRLRELHLMKNRLSELPA-TIAELTALNVL 201
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ NN I + S L++L L L N LT L + L L+++DL N+++
Sbjct: 202 DVANNAIERLPDSFGQLSQLRELNLRFNALTH-LPEAFCQLGALQSLDLRANRLS 255
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 43 LLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
L L NN IT + P I R+LH+ N L+ L ++ LT LN L + NN ++
Sbjct: 155 LRLYNNAIT-----SLPAAIGRLTRLRELHLMKNRLSELPATIAELTALNVLDVANNAIE 209
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSLDGLLRGLTK 153
L G LS+L+ L + N L LP + F QLG+L + NR+++L + +
Sbjct: 210 RLPDSFGQLSQLRELNLRFNALTHLP---EAFCQLGALQSLDLRANRLSTLPAGMAEMKN 266
Query: 154 LQVFNMDFNQIT 165
L+ ++ +N T
Sbjct: 267 LRRLDLRWNDFT 278
>gi|421120079|ref|ZP_15580393.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410347165|gb|EKO98084.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 426
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLQNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+ ++ ++ L +L LYL +NQL L
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLN-VL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNAL 363
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLQNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NVLPNKVEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 397 KKLYLHNNPLPSEKIERIRKL 417
>gi|428166954|gb|EKX35921.1| hypothetical protein GUITHDRAFT_42882, partial [Guillardia theta
CCMP2712]
Length = 287
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 7/217 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSL-RGLTDL 85
+T G L +L L +N IT + E F +R L +G N LTS+ ++ GL L
Sbjct: 9 ITEAVFDGLSNLESLFLWDNQITILPEGIFHGLFNLRHLSLGSNQLTSMPEAIFDGLLGL 68
Query: 86 NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITS 143
L + N LKSL EG L L+ L + ++L LP+ I Q + L L +NN +TS
Sbjct: 69 EVLSFSGNNLKSLPEGIFHGLLSLRELNLNSDKLTTLPAGIFQGLTGLKYLSLDNNELTS 128
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKL 201
+ +G+ +GLT L N++ + F++L L+ + L +++TS+ + +GL+KL
Sbjct: 129 IPEGIFKGLTALYWIYFSNNRLKELPAGVFRDLSALEELDLTGHELTSLEEGVFTGLSKL 188
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L+L +N++ GL L +DL N++ F
Sbjct: 189 RGLHLGYNKIARLDKGVFHGLSGLSWLDLGGNQLTGF 225
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 10/221 (4%)
Query: 25 GSHPLTSDD---LKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSL 79
GS+ LTS G L L NN+ + E F ++R+L++ + LT+L +
Sbjct: 50 GSNQLTSMPEAIFDGLLGLEVLSFSGNNLKSLPEGIFHGLLSLRELNLNSDKLTTLPAGI 109
Query: 80 -RGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYA 136
+GLT L +L L+NN L S+ EG L+ L + N+L+ LP+ + + S L L
Sbjct: 110 FQGLTGLKYLSLDNNELTSIPEGIFKGLTALYWIYFSNNRLKELPAGVFRDLSALEELDL 169
Query: 137 NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+ +TSL+ G+ GL+KL+ ++ +N+I + + F L L + L NQ+T +
Sbjct: 170 TGHELTSLEEGVFTGLSKLRGLHLGYNKIARLDKGVFHGLSGLSWLDLGGNQLTGFPKGI 229
Query: 196 -SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
T+L L L NQLT GL + + L N++
Sbjct: 230 FDRTTQLLGLDLGGNQLTSLPEGLFDGLSTIGWLYLQDNRL 270
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 29/164 (17%)
Query: 70 NNLTSLNNSL-RGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-Q 126
N LTS+ + +GLT L W++ +NNRLK L G LS L+ L + ++L +L +
Sbjct: 124 NELTSIPEGIFKGLTALYWIYFSNNRLKELPAGVFRDLSALEELDLTGHELTSLEEGVFT 183
Query: 127 LFSQLGSLYANNNRITSLD-GLLRGLTKL----------------------QVFNMDF-- 161
S+L L+ N+I LD G+ GL+ L Q+ +D
Sbjct: 184 GLSKLRGLHLGYNKIARLDKGVFHGLSGLSWLDLGGNQLTGFPKGIFDRTTQLLGLDLGG 243
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
NQ+T + F L + + LQ+N++ ++S + + LT L L
Sbjct: 244 NQLTSLPEGLFDGLSTIGWLYLQDNRLVCVSSMAFANLTALTVL 287
>gi|291228204|ref|XP_002734069.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
2-like [Saccoglossus kowalevskii]
Length = 1188
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
Query: 61 TIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQL 118
++R+L + +N + L S L+ L+LNNN++ +L+ G ++ L+ L + +N++
Sbjct: 153 SLRELDLNYNKIEELKCGSFPSRNMLHQLYLNNNKITTLQPGCFNNITTLEWLKLNKNKI 212
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L + L L + N+I S+D L +GL L + + N I+ + F L
Sbjct: 213 SNLDKVFEPLENLKYLELSRNKIKSIDSLAFKGLKNLHILRLKRNGISELMDGAFYGLDT 272
Query: 178 LDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ +I L NN +T + S L GLT L L LSHN+++ D K L +DLS+N +N
Sbjct: 273 IQNIHLDNNNLTVVRKSWLYGLTTLQELTLSHNKISSIEADGWDFCKELWEIDLSHNMLN 332
Query: 237 KFGT 240
T
Sbjct: 333 SLET 336
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLN-NSLRGLTDL 85
++ L G +L L L N I + +FP + +L++ N +T+L +T L
Sbjct: 143 ISGTSLDGLASLRELDLNYNKIEELKCGSFPSRNMLHQLYLNNNKITTLQPGCFNNITTL 202
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL-------------- 131
WL LN N++ +L+ L L+ L + +N+++++ D F L
Sbjct: 203 EWLKLNKNKISNLDKVFEPLENLKYLELSRNKIKSI--DSLAFKGLKNLHILRLKRNGIS 260
Query: 132 ----GSLYA----------NNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
G+ Y NNN L GLT LQ + N+I+ + D +
Sbjct: 261 ELMDGAFYGLDTIQNIHLDNNNLTVVRKSWLYGLTTLQELTLSHNKISSIEADGWDFCKE 320
Query: 178 LDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L I L +N + S+ ++L L L LY+ +NQ++ + GL L ++D+++N I+
Sbjct: 321 LWEIDLSHNMLNSLETNLFKHLQALKNLYMGNNQISNIDDEAFMGLSSLESLDMNHNDIS 380
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNNSLRGLTDLN 86
L D G L L L NN +T I+ + F R +L + FN+LT++ N L +L
Sbjct: 72 LPHDAFDGLVNLRQLDLSNNELTTINGSIFENLTRLQELKIAFNSLTTIPNFGGKLINLT 131
Query: 87 WLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSL 144
L L++N + + G L L+ L+ L + N++E L + L LY NNN+IT+L
Sbjct: 132 QLSLHHNNIIDISGTSLDGLASLRELDLNYNKIEELKCGSFPSRNMLHQLYLNNNKITTL 191
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
+ F N+ L+ + L N+I++++ L L YL
Sbjct: 192 -----------------------QPGCFNNITTLEWLKLNKNKISNLDKVFEPLENLKYL 228
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LS N++ +GLK L + L N I++
Sbjct: 229 ELSRNKIKSIDSLAFKGLKNLHILRLKRNGISEL 262
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L+ L +P +I +++ L +N + D GL L+ ++ N++T +
Sbjct: 40 LVDCSNKHLTEMPKEIPTWTEFLDLQSNYIQSLPHDAF-DGLVNLRQLDLSNNELTTING 98
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
F+NL L + + N +T++ + L L L L HN + + + GL LR +D
Sbjct: 99 SIFENLTRLQELKIAFNSLTTIPNFGGKLINLTQLSLHHNNIIDISGTSLDGLASLRELD 158
Query: 230 LSYNKINK-----FGTRN 242
L+YNKI + F +RN
Sbjct: 159 LNYNKIEELKCGSFPSRN 176
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 33/191 (17%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
KG L L L N I+ + + AF TI+ +H+ NNLT + S L GLT L L L
Sbjct: 243 FKGLKNLHILRLKRNGISELMDGAFYGLDTIQNIHLDNNNLTVVRKSWLYGLTTLQELTL 302
Query: 91 NNNRLKSLEGQLGTLSK-LQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD--- 145
++N++ S+E K L + + N L +L +++ + L +LY NN+I+++D
Sbjct: 303 SHNKISSIEADGWDFCKELWEIDLSHNMLNSLETNLFKHLQALKNLYMGNNQISNIDDEA 362
Query: 146 -------------------------GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
G GL L ++ N+I + + F L L+
Sbjct: 363 FMGLSSLESLDMNHNDISWTVEDTTGAFLGLEALHRLSLASNKIMSIHKRAFTGLSGLEV 422
Query: 181 ISLQNNQITSM 191
+ L +N +TS+
Sbjct: 423 LDLSDNMLTSI 433
>gi|126570402|gb|ABO21168.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 251
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 9/162 (5%)
Query: 57 AFPPTI----RKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQL 110
A PP I + L + +N T L +++ +GLT L WL ++NN LK + G L++L+
Sbjct: 26 AVPPGIPADTKSLDLKYNAFTQLPSDAFKGLTALTWLSVSNNELKFVPAGLFDQLAELKQ 85
Query: 111 LVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVR 168
L ++ NQL++LPS + +QL LY N+ITSL + LTKL ++ NQ+ +
Sbjct: 86 LYLQTNQLKSLPSTLFDHLTQLDKLYLGGNQITSLRPRVFDRLTKLTYLSLSENQLQSIP 145
Query: 169 RDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHN 209
F L NL ++SL NQ+ S+ + + L KL + L N
Sbjct: 146 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDPLGKLQTIQLWSN 187
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 26/171 (15%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSL-RGLTDL 85
L SD KG AL L + NN + + F +++L++ N L SL ++L LT L
Sbjct: 48 LPSDAFKGLTALTWLSVSNNELKFVPAGLFDQLAELKQLYLQTNQLKSLPSTLFDHLTQL 107
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
+ L+L N++ SL ++ L+KL L + +NQL+++P+
Sbjct: 108 DKLYLGGNQITSLRPRVFDRLTKLTYLSLSENQLQSIPA--------------------- 146
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
G LT LQ ++ NQ+ V F L L +I L +N S+
Sbjct: 147 -GAFDKLTNLQTLSLSTNQLQSVPHGAFDPLGKLQTIQLWSNPWNCSACSI 196
>gi|418696273|ref|ZP_13257282.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
gi|421107345|ref|ZP_15567897.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
gi|409955802|gb|EKO14734.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
gi|410007361|gb|EKO61071.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
Length = 173
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
+ +L WL LN N+LK L LG L L +L + N+L+ LPS L SL N NR
Sbjct: 1 MQNLEWLDLNENQLKELPESLGQLQNLNILYLLGNELKVLPSSFSKLQSLKSLNLNYNRF 60
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L L L+ + NQ+T + +E NL NL+S+ L+ N++ + +S+ L L
Sbjct: 61 QVFPKELISLKNLETLELTGNQLTFL-PEEIGNLENLNSLFLEANRLKQLPNSIVKLQNL 119
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
LYL N+LT FL ++I L+ L+ + L
Sbjct: 120 ENLYLQENRLT-FLPEEIGELQNLKELHLQ 148
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ N L L +S L L L LN NR + +L +L L+ L + NQL LP +
Sbjct: 30 LYLLGNELKVLPSSFSKLQSLKSLNLNYNRFQVFPKELISLKNLETLELTGNQLTFLPEE 89
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L SL+ NR+ L + L L+ + N++T + +E L NL + LQ
Sbjct: 90 IGNLENLNSLFLEANRLKQLPNSIVKLQNLENLYLQENRLTFL-PEEIGELQNLKELHLQ 148
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ +N L L +L L L N+L L ++G L L L +E N+L+
Sbjct: 49 SLKSLNLNYNRFQVFPKELISLKNLETLELTGNQLTFLPEEIGNLENLNSLFLEANRLKQ 108
Query: 121 LPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
LP+ I L +LY NR+T L G L+ L +L + N + R++ Q L
Sbjct: 109 LPNSIVKLQNLENLYLQENRLTFLPEEIGELQNLKELHL--QGANSFSEKEREKIQEL 164
>gi|124002570|ref|ZP_01687423.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123992399|gb|EAY31767.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 1270
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 111/216 (51%), Gaps = 15/216 (6%)
Query: 30 TSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLT 83
S +++ L TLLL NN I+ + P +I KL + N+L L SL L
Sbjct: 1021 VSTEIEQMSQLHTLLLNNNQISDL-----PESIGKLVKLQDVQLFANHLKHLPASLGKLR 1075
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
+LN + L NNRLK+L +L K+ L + NQL LP I S L + NNN+IT
Sbjct: 1076 NLNRINLKNNRLKALPDELH-WKKIYKLDLSGNQLATLPESIANCSYLNEIKLNNNQITF 1134
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDE-FQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L L L+ + F++D + + E + L ++++ +N++T++ S L ++L
Sbjct: 1135 LPNSLSNLS-VTYFSIDLSNNELTELPEVIPQIKQLRNLNISDNKLTALPSELCQASELY 1193
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
YL +++NQ+T R LK L VD SYN+I K
Sbjct: 1194 YLRVTNNQITHLPQGFSRMLK-LNNVDFSYNQIQKL 1228
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 99/182 (54%), Gaps = 4/182 (2%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P ++KL + LT ++ + ++ L+ L LNNN++ L +G L KLQ + + N L+
Sbjct: 1006 PQLKKLSIQNGKLTKVSTEIEQMSQLHTLLLNNNQISDLPESIGKLVKLQDVQLFANHLK 1065
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP+ + L + NNR+ +L L K+ ++ NQ+ + + N L+
Sbjct: 1066 HLPASLGKLRNLNRINLKNNRLKALPDELHW-KKIYKLDLSGNQLATLP-ESIANCSYLN 1123
Query: 180 SISLQNNQITSMNSSLSGLTKLAY-LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
I L NNQIT + +SLS L+ + + LS+N+LTE L + I +K+LR +++S NK+
Sbjct: 1124 EIKLNNNQITFLPNSLSNLSVTYFSIDLSNNELTE-LPEVIPQIKQLRNLNISDNKLTAL 1182
Query: 239 GT 240
+
Sbjct: 1183 PS 1184
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHV-GFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
P L L L N ++T + + + K +N LT L+ L+ L L L+ N L+
Sbjct: 937 PHLEELSLANCSLTAVPKGVYTLKKLKKLNLSYNQLTHLSGGFSQLSQLEELVLDKNPLQ 996
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
+ L +L+ L I+ +L + ++I+ SQL +L NNN+I+ L + L KLQ
Sbjct: 997 QVAPDFYRLPQLKKLSIQNGKLTKVSTEIEQMSQLHTLLLNNNQISDLPESIGKLVKLQD 1056
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ N + + L NL+ I+L+NN++ ++ L K+ L LS NQL L
Sbjct: 1057 VQLFANHLKHLPAS-LGKLRNLNRINLKNNRLKALPDELHW-KKIYKLDLSGNQLAT-LP 1113
Query: 217 DDIRGLKRLRTVDLSYNKI 235
+ I L + L+ N+I
Sbjct: 1114 ESIANCSYLNEIKLNNNQI 1132
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
L NN + + + I KL + N L +L S+ + LN + LNNN++ L L
Sbjct: 1082 LKNNRLKALPDELHWKKIYKLDLSGNQLATLPESIANCSYLNEIKLNNNQITFLPNSLSN 1141
Query: 105 LSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LS + + N+L LP I QL +L ++N++T+L L ++L + NQ
Sbjct: 1142 LSVTYFSIDLSNNELTELPEVIPQIKQLRNLNISDNKLTALPSELCQASELYYLRVTNNQ 1201
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL--TKLAY 203
IT + + F + L+++ NQI + L + K AY
Sbjct: 1202 ITHLPQG-FSRMLKLNNVDFSYNQIQKLPDQLPPVFQDKQAY 1242
>gi|421083712|ref|ZP_15544583.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421101927|ref|ZP_15562537.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410368072|gb|EKP23450.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433629|gb|EKP77969.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|456983304|gb|EMG19635.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 221
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L+ N+L SL ++G L KL++L + NQ +LP +I
Sbjct: 1 MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L + N+ TSL + L L+V N+ NQ+T + + E L NL+ + L N
Sbjct: 61 QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPK-EIGQLQNLERLDLAGN 119
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
Q TS+ + L KL L L HN+ T F +IR + L+ + LS +++
Sbjct: 120 QFTSLPKEIGQLQKLEALNLDHNRFTIF-PKEIRQQQSLKWLRLSGDQL 167
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N TSL + L +L L L+ N+ SL ++G L L++L + NQL +L
Sbjct: 42 LRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSL 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+ TSL + L KL+ N+D N+ T+ + E + +L +
Sbjct: 102 PKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPK-EIRQQQSLKWL 160
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L +Q+ ++ + L L L L N
Sbjct: 161 RLSGDQLKTLPKEILLLQNLQVLRLYSN 188
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LTSL + L +L L L N+ SL ++G L KL+ L ++ N+
Sbjct: 88 LRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIF 147
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I+ L L + +++ +L + L LQV + N ++ + + Q L
Sbjct: 148 PKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQVLRLYSNSFSLKEKQKIQEL 201
>gi|328777687|ref|XP_001121376.2| PREDICTED: chaoptin-like [Apis mellifera]
Length = 1205
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
+L+ L L NNNI I E+ PP I L + N L S ++L+ L L WL+L N K+L
Sbjct: 154 SLVWLNLDNNNIEEISEDTLPPNIHTLSLNSNLLKSFPSTLKFLKQLTWLYLRGNDFKNL 213
Query: 99 EGQLGTLSKLQLLVIEQNQLEAL--PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQV 156
E S L+L+ + +N +E + S ++ ++N++T L + +++
Sbjct: 214 ELPDFQTSDLELVDVSENCIEWIRTSSLSNRTLKIKEFNLDSNKLTLLPAGIFDHLEIKR 273
Query: 157 FNMDFNQITMVRRDEFQNLHN-LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++ N I V D F+ L + L+ ++L+NN + S+ ++S L KL+YLYL++N +
Sbjct: 274 IHLSSNSIKNVDDDAFRGLEDMLEYLNLENNDLPSVPGAVSRLRKLSYLYLANNDI 329
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDL 85
L SD + P L+T+ L N IT + NAF P +R LH+ FN LT+L+ +++ +
Sbjct: 553 LNSDSIMDCPELVTISLAYNRITKMERNAFYGLPNLRFLHLEFNKLTTLDLDAISEIGGP 612
Query: 86 NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD 145
++ + S+ G ++ L L + N + LP+D + Y
Sbjct: 613 DFALNVSYNAISIINSGGLMNNLTRLDLSFNNISHLPAD--------TFY---------- 654
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 204
G L++ ++ N I ++ F L +L++++++NN+I + S GL L L
Sbjct: 655 ----GTPDLKILDLQSNFIVVLEPGTF-TLRHLETLNIRNNKIEGLRKQSFHGLELLQQL 709
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LS NQ+ + L + R LK LR ++LS NKI
Sbjct: 710 DLSENQIAQLLTEQFRNLKNLRILNLSGNKI 740
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 33/244 (13%)
Query: 1 MSRFSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAF-- 58
+RF + L+++ +G L +D L + + L L++N +++I + +F
Sbjct: 24 FARFPDVSVSYVAQLDVVG----SGMQSLDNDALTSSVGVEALGLMSNRLSNIGDKSFSG 79
Query: 59 -PPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
++R L + +N L + R L LNWL +++N L SL+G G SK
Sbjct: 80 IADSLRSLDLSYNALEDVPFKVFRDLRKLNWLNMHSNHLTSLDGDWGH-SK--------- 129
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L + + +N I + + L N+D N I + D
Sbjct: 130 ------------DALTNAFFGDNSIIEIPKIFNTFESLVWLNLDNNNIEEISEDTLP--P 175
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
N+ ++SL +N + S S+L L +L +LYL N L D + L VD+S N I
Sbjct: 176 NIHTLSLNSNLLKSFPSTLKFLKQLTWLYLRGNDFKNLELPDFQT-SDLELVDVSENCIE 234
Query: 237 KFGT 240
T
Sbjct: 235 WIRT 238
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 95/239 (39%), Gaps = 73/239 (30%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNN--------- 77
+ S D + L LLL NN +T + + F +++L + FN+LT L++
Sbjct: 381 IQSGDFEWAEDLEILLLRNNILTKLKDETFKGAKKLKELSLSFNHLTELSDDCFIGIEES 440
Query: 78 ------------------SLRGLTDLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQL 118
+LR L++L WL L+NN +++E + +L+ + +E N+L
Sbjct: 441 LDILELSFAFATDVFPQRALRPLSNLLWLVLDNNNFQTIEATAFYSFQRLRYINLESNRL 500
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP I L +S+ LR + + +N + + F NL L
Sbjct: 501 HYLPERIFL--------------SSVHPELRDV------KLGYNFLEAIPEFSFHNLTEL 540
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
S+ L N+I +NS D I L T+ L+YN+I K
Sbjct: 541 RSLDLTGNRIKILNS-----------------------DSIMDCPELVTISLAYNRITK 576
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 33/212 (15%)
Query: 60 PTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEG-------QLGTLSKL--Q 109
P +R + +G+N L ++ S LT+L L L NR+K L +L T+S +
Sbjct: 514 PELRDVKLGYNFLEAIPEFSFHNLTELRSLDLTGNRIKILNSDSIMDCPELVTISLAYNR 573
Query: 110 LLVIEQNQLEALPS--------------DIQLFSQLG----SLYANNNRITSLD--GLLR 149
+ +E+N LP+ D+ S++G +L + N I+ ++ GL+
Sbjct: 574 ITKMERNAFYGLPNLRFLHLEFNKLTTLDLDAISEIGGPDFALNVSYNAISIINSGGLMN 633
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
LT+L ++ FN I+ + D F +L + LQ+N I + L L L + +N
Sbjct: 634 NLTRL---DLSFNNISHLPADTFYGTPDLKILDLQSNFIVVLEPGTFTLRHLETLNIRNN 690
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
++ GL+ L+ +DLS N+I + T
Sbjct: 691 KIEGLRKQSFHGLELLQQLDLSENQIAQLLTE 722
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 40 LITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLK 96
L TL + NN I + + +F +++L + N + L R L +L L L+ N+++
Sbjct: 682 LETLNIRNNKIEGLRKQSFHGLELLQQLDLSENQIAQLLTEQFRNLKNLRILNLSGNKIR 741
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
SL + +KL++L + N+ +PS +++ L L +N + LD ++L
Sbjct: 742 SLPRDVFEGTKLEILDLSNNKFTVVPSPSFLEVGYTLRDLNLADNFVDHLDSTAFPTSQL 801
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTE 213
N+ N++T++ + F +L L S+++ N + + L L LYL++ L +
Sbjct: 802 VSLNLAHNRLTILPDNSFVSLGKLLSLNVSQNVLQANFKELFHYLPGLRQLYLANCGLKD 861
Query: 214 FLLDDIRGLKRLRTVDLSYNKIN 236
L L L +DLS+N I+
Sbjct: 862 IPL---LPLMNLNVLDLSFNYID 881
>gi|194210974|ref|XP_001495377.2| PREDICTED: leucine-rich repeats and immunoglobulin-like domains 2
[Equus caballus]
Length = 1065
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Query: 41 ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
ITLL LV+N I I+ F + L + N ++ + S L +L L+NNR+
Sbjct: 122 ITLLSLVHNIIPEINSETFQFYSALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITV 181
Query: 98 LE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKL 154
LE G LS L+V + +N++ +P I L L NRI ++GL +GL L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKVVEGLTFQGLDSL 241
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTE 213
+ M N I+ ++ F L N++ + L++N +T +N L GL L LY+S N +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLDNMEELDLEHNNLTEVNKGWLYGLRMLQQLYVSQNAVER 301
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
D +RL +DLSYN++ +
Sbjct: 302 ISPDAWEFCQRLSELDLSYNQLTRL 326
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLDNMEELDLEHNNLTEVNKGWLYGLRMLQQLYVSQNAV 299
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
+L +++L+NN+I+ + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 360 HLQTLNLRNNEISWAIEDASEVFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 233 NKI 235
N I
Sbjct: 420 NAI 422
>gi|418752836|ref|ZP_13309093.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409966788|gb|EKO34628.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 222
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
G N LT+L + L +L L L N+L +L ++G L KLQ L + N+L LP +I
Sbjct: 61 GGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGN 120
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
+L +L N++ +L + L KL+ ++ N++T + + E NL NL ++L +NQ
Sbjct: 121 LQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPK-EIGNLQNLQELNLNSNQ 179
Query: 188 ITSMNSSLSGLTKLAYLYLSHN 209
T++ + L KL +LYL N
Sbjct: 180 FTTLPKEIGKLQKLKWLYLGGN 201
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
Query: 74 SLNNSLRGLTDLNWLFLN----NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
+L +L+ TD+ L L N+L +L ++G L LQ L +E NQL LP +I
Sbjct: 40 NLTEALQHPTDVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQ 99
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+L +L ++NR+T+L + L KLQ ++ NQ+ + + E + L L+++ L NN++T
Sbjct: 100 KLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPK-EIEKLQKLEALHLGNNELT 158
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
++ + L L L L+ NQ T L +I L++L+ + L N
Sbjct: 159 TLPKEIGNLQNLQELNLNSNQFT-TLPKEIGKLQKLKWLYLGGN 201
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 116 NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
N+L LP +I L L N++T+L + L KLQ ++ N++T + + E NL
Sbjct: 63 NKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPK-EIGNL 121
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L ++ L NQ+ ++ + L KL L+L +N+LT L +I L+ L+ ++L+ N+
Sbjct: 122 QKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELT-TLPKEIGNLQNLQELNLNSNQ 179
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N++T + + E NL NL ++L+ NQ+T++ + L KL L LSHN+LT L +I
Sbjct: 63 NKLTTLPK-EIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLT-TLPKEIGN 120
Query: 222 LKRLRTVDLSYNKI 235
L++L+T+DL+ N++
Sbjct: 121 LQKLQTLDLAQNQL 134
>gi|260802228|ref|XP_002595994.1| hypothetical protein BRAFLDRAFT_84068 [Branchiostoma floridae]
gi|229281248|gb|EEN52006.1| hypothetical protein BRAFLDRAFT_84068 [Branchiostoma floridae]
Length = 677
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNR 94
P L L + +N IT I +AF P +R+L++ N +T + ++ L+ L L+L N+
Sbjct: 176 PQLQYLNIFSNQITKIQPDAFANLPGLRELNLSRNKITKIKEDAFANLSGLRELWLGKNK 235
Query: 95 LKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLD-GLLRGL 151
+ ++ G L L+ + NQ+ + + +QL L +NN+IT + G
Sbjct: 236 ITTINPGIFANLPWLEKFGLWGNQITLIQEGTFVNLAQLQELDLSNNKITLIPPGAFANF 295
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQ 210
T LQV ++ N+IT++++ F NL L +SL NQIT + + + + L L+L+HN+
Sbjct: 296 TLLQVLSLTSNKITLIQKGTFVNLTRLRKLSLSYNQITMIQPGAFANVPGLRQLFLAHNK 355
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKI 235
+T D L LR + L+ NKI
Sbjct: 356 ITNIKDDAFANLSGLRELWLANNKI 380
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 38 PALITLLLVN-NNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNN 93
P+ IT L +N NNI I E AF P ++KL + N +T + + L L L+ N
Sbjct: 55 PSSITDLYLNHNNIAMIREGAFVNLPQLQKLRLHTNQITMIQEGAFVNLPQLQKFSLSYN 114
Query: 94 RLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLRG 150
++ + EG L++LQ L + N++ L + + QL +L+ + N I + +G+
Sbjct: 115 QITLIQEGTFVNLAQLQELKLSHNKITMLQNGAFVNLPQLKTLFLSYNNIAMIREGVFVN 174
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHN 209
+ +LQ N+ NQIT ++ D F NL L ++L N+IT + + + L+ L L+L N
Sbjct: 175 VPQLQYLNIFSNQITKIQPDAFANLPGLRELNLSRNKITKIKEDAFANLSGLRELWLGKN 234
Query: 210 QLT 212
++T
Sbjct: 235 KIT 237
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 53/210 (25%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVI 113
+ PP +++G N+T N +TDL +LN+N + + EG L +LQ L +
Sbjct: 33 RSCAPPRCYCIYLGLTNITL--NLPSSITDL---YLNHNNIAMIREGAFVNLPQLQKLRL 87
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
NQ+ + +G L +LQ F++ +NQIT+++ F
Sbjct: 88 HTNQITMIQ----------------------EGAFVNLPQLQKFSLSYNQITLIQEGTFV 125
Query: 174 NLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSH------------------------ 208
NL L + L +N+IT + N + L +L L+LS+
Sbjct: 126 NLAQLQELKLSHNKITMLQNGAFVNLPQLKTLFLSYNNIAMIREGVFVNVPQLQYLNIFS 185
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQ+T+ D L LR ++LS NKI K
Sbjct: 186 NQITKIQPDAFANLPGLRELNLSRNKITKI 215
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLN 86
+ D P L L L N IT I E+AF +R+L +G N +T++N + +L
Sbjct: 191 IQPDAFANLPGLRELNLSRNKITKIKEDAFANLSGLRELWLGKNKITTINPGI--FANLP 248
Query: 87 WL---FLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRI 141
WL L N++ + EG L++LQ L + N++ +P F+ L L +N+I
Sbjct: 249 WLEKFGLWGNQITLIQEGTFVNLAQLQELDLSNNKITLIPPGAFANFTLLQVLSLTSNKI 308
Query: 142 TSLD-GLLRGLTKLQVFNMDFNQITMV------------------------RRDEFQNLH 176
T + G LT+L+ ++ +NQITM+ + D F NL
Sbjct: 309 TLIQKGTFVNLTRLRKLSLSYNQITMIQPGAFANVPGLRQLFLAHNKITNIKDDAFANLS 368
Query: 177 NLDSISLQNNQITSMNSS 194
L + L NN+IT++ +
Sbjct: 369 GLRELWLANNKITTIKPA 386
>gi|418717491|ref|ZP_13277153.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410787088|gb|EKR80823.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 426
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+T++ ++ L +L LYL +NQL FL
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLN-FL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+I L+ L ++DL +N++N
Sbjct: 341 PKEIGQLQNLESLDLEHNQLNAL 363
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT +N P IR L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEALKN--PQNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NFLPKEIGQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 397 KKLYLHNNPLPSEKIERIRKL 417
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 2/135 (1%)
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
++G L LQ L + +NQL LP +I L L + N++T+L + L +LQ +
Sbjct: 274 EIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLG 333
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQ+ + + E L NL+S+ L++NQ+ ++ + L KL L L +NQL L ++I+
Sbjct: 334 NNQLNFLPK-EIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLA-TLPEEIK 391
Query: 221 GLKRLRTVDLSYNKI 235
LK L+ + L N +
Sbjct: 392 QLKNLKKLYLHNNPL 406
>gi|45656982|ref|YP_001068.1| hypothetical protein LIC11098 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421087184|ref|ZP_15548025.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421104950|ref|ZP_15565543.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600219|gb|AAS69705.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410365260|gb|EKP20655.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430293|gb|EKP74663.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|456983450|gb|EMG19759.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 426
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+T++ ++ L +L LYL +NQL FL
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLN-FL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+I L+ L ++DL +N++N
Sbjct: 341 PKEIGQLRNLESLDLEHNQLNAL 363
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEALKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 2/135 (1%)
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
++G L LQ L + +NQL LP +I L L + N++T+L + L +LQ +
Sbjct: 274 EIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLG 333
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQ+ + + E L NL+S+ L++NQ+ ++ + L KL L L +NQL L ++I+
Sbjct: 334 NNQLNFLPK-EIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLA-TLPEEIK 391
Query: 221 GLKRLRTVDLSYNKI 235
LK L+ + L N +
Sbjct: 392 QLKNLKKLYLHNNPL 406
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NFLPKEIGQLRNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L + IR L
Sbjct: 397 KKLYLHNNPLPSEKIARIRKL 417
>gi|124007624|ref|ZP_01692328.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
gi|123986922|gb|EAY26687.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
Length = 440
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 93/171 (54%), Gaps = 7/171 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PPTI KL + +N L L ++ L L L L+ N LK L ++G L++L+ L
Sbjct: 263 LPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQL 322
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
+ QN L LP +I + L +L+ N++T++ + LT LQ F + NQ+T + E
Sbjct: 323 NLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFMLSNNQLTSLPI-E 381
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+L +L ++SL+NNQ+ ++ + L+KL L L+ N + + ++ R L
Sbjct: 382 IGHLSHLSTLSLENNQLATLPLEIKQLSKLKSLQLTGNPMAQSEIEKARKL 432
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 2/178 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+++L + NN+ L+ +R L L L L N L L + L+ L+ L++ N L
Sbjct: 88 TLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQLTGLEELILGYNYLTQ 147
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP + +QL L +NN + L + LT L N+ +NQ++ + + +NL NL
Sbjct: 148 LPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYNQLSELSK-MTENLVNLQQ 206
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++LQ+NQ++ + ++ LT L L LS N + L +I L L+ + L N + +
Sbjct: 207 LNLQHNQLSQLPMAIGQLTALQKLVLSGNNMN-VLPANIEQLTSLKHLSLGGNTLEQL 263
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 9/201 (4%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
AL L+L NN+ + N T ++ L +G N L L ++ L L LFL+ N L+
Sbjct: 226 ALQKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQ 285
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKL 154
L ++ L LQ L + N+L+ LP++I +QL L N +T L G L L L
Sbjct: 286 LPIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENL 345
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
V+ N++T + Q L L L NNQ+TS+ + L+ L+ L L +NQL
Sbjct: 346 WVYQ---NKLTNIPPTVGQ-LTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLATL 401
Query: 215 LLDDIRGLKRLRTVDLSYNKI 235
L +I+ L +L+++ L+ N +
Sbjct: 402 PL-EIKQLSKLKSLQLTGNPM 421
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL++ +N L+ L+ L +L L L +N+L L +G L+ LQ LV+ N + LP+
Sbjct: 183 KLNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPA 242
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I+ + L L N + L + L L +D+N + + E + L +L + L
Sbjct: 243 NIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQL-PIEIKYLKHLQKLEL 301
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
N++ + + + LT+L L L N LT+
Sbjct: 302 SYNELKELPAEIGQLTQLKQLNLGQNLLTKL 332
>gi|331005137|ref|ZP_08328538.1| Internalin-like protein [gamma proteobacterium IMCC1989]
gi|330421056|gb|EGG95321.1| Internalin-like protein [gamma proteobacterium IMCC1989]
Length = 687
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 112/241 (46%), Gaps = 44/241 (18%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSL---- 79
S+ LTS L P L L NN +T I VG N+ NN+L
Sbjct: 325 VASNQLTSLLLGEMPQLQNLWAYNNQLTEIDVAGL--------VGLRNIVVNNNALGILD 376
Query: 80 -RGLTDLNWLFLNNNRLKSL--------EG-----------QLGTLSKLQLLVIEQNQLE 119
GL +L WL NNRL L EG + L+KL L + NQL
Sbjct: 377 VSGLHNLQWLRAANNRLAQLSTGNLLNVEGIDVSNNLLQVLDVRDLNKLSFLFVNNNQLT 436
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
L D+ S L A +NR+T LD + LT+L ++D NQ+T + D NL NL
Sbjct: 437 QL--DLSNLSDLEYFTAWSNRLTFLD--VSALTQLTRLHVDKNQLTTINVD---NLVNLT 489
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
S+S+ NNQ++S++ LS L YLY +NQLT + I L +++SYN++ +
Sbjct: 490 SLSVANNQLSSLD--LSAQASLKYLYAYNNQLTSLV---IPSATDLVYMNISYNQLQQIN 544
Query: 240 T 240
T
Sbjct: 545 T 545
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 121/237 (51%), Gaps = 29/237 (12%)
Query: 16 NLIDLEPETG-SHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTS 74
NL DLE T S+ LT D+ L L + N +T I+ + + L V N L+S
Sbjct: 442 NLSDLEYFTAWSNRLTFLDVSALTQLTRLHVDKNQLTTINVDNLV-NLTSLSVANNQLSS 500
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L+ L L +L+ NN+L SL + + + L + I NQL+ + +D S L +L
Sbjct: 501 LD--LSAQASLKYLYAYNNQLTSL--VIPSATDLVYMNISYNQLQQINTDG--LSNLQTL 554
Query: 135 YANNNRITSLD-GLLRGLTKLQVFNMDFN--------QITMVRRD-------EFQNLHNL 178
A+NN++T L+ G + GL +L V + + Q+T +R + +NL +L
Sbjct: 555 KADNNQLTVLEVGAMSGLKQLSVSHNELTTLAIDNLIQLTNLRVEYNQLQALNLENLSSL 614
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + +NQ+ +N +S LTKL L+L HNQLTE D+ L L +++++ N I
Sbjct: 615 EFFTAWSNQLQVVN--VSALTKLTRLHLDHNQLTEL---DVSALTELTSLNVANNNI 666
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 17/184 (9%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++K+ V N LTS++ + GL DLN+L NN+L +L+ + L+ L L +++N+L ++
Sbjct: 88 LKKVFVEDNQLTSID--VSGLVDLNYLGAWNNQLGALD--VSGLTALTHLHVDKNELSSI 143
Query: 122 PSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+L + L SL+ +N++ +LD G L+ L + +N N++ ++ E L LD
Sbjct: 144 VGISELVN-LQSLHVAHNQLVTLDVGSLQKLEQFWAYN---NRLELLDVSELTQLTLLD- 198
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L+NN + +++ + LT+L+YL +++N+L ++ L LR D N I +
Sbjct: 199 --LKNNSLEALD--IESLTELSYLNVTNNKLILLATSNLTQLSSLRAND---NNIEELNV 251
Query: 241 RNEG 244
N
Sbjct: 252 VNSA 255
>gi|241614044|ref|XP_002406571.1| toll, putative [Ixodes scapularis]
gi|215500829|gb|EEC10323.1| toll, putative [Ixodes scapularis]
Length = 378
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 37/244 (15%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
+ S L PAL L L N I H+ + AFP +++ L++ N ++ + + + L +
Sbjct: 13 VPSSSLVDLPALTWLSLDENRIEHVPKGAFPHLSSLQTLNLTSNKISVIEDGAFATLPSV 72
Query: 86 NWLFLNNNRLKSLEGQ-------------------------LGTLSKLQLLVIEQNQLE- 119
+ L L NRLK+L G L L L++L + N++
Sbjct: 73 HILLLGGNRLKTLPGSAFDGLNRLTTLDLSNNFMVHIPTTTLRRLPSLKMLAMSANKIRT 132
Query: 120 ---ALPSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
ALPSD++ L L N I+ ++ G G+ L+V +D NQI V F+ L
Sbjct: 133 FNGALPSDLR---SLEYLDLGRNEISQIEPGSFEGMKSLKVLKLDVNQIRKVDASTFRGL 189
Query: 176 HNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
NL+SI L +NQ+ S+ LS L KL ++L +N++ + +R + L+YN
Sbjct: 190 ENLESIHLNDNQLLVFPSALLSSLQKLQKVHLDYNRIAVLSPAVVSPGMNIRELSLAYNL 249
Query: 235 INKF 238
I +
Sbjct: 250 IAEI 253
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 65 LHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP 122
LH+ NN + ++SL L L WL L+ NR++ + +G LS LQ L + N++ +
Sbjct: 3 LHINGNNFEDVPSSSLVDLPALTWLSLDENRIEHVPKGAFPHLSSLQTLNLTSNKISVIE 62
Query: 123 SDIQLFSQLGSLYA---NNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
F+ L S++ NR+ +L G GL +L ++ N + + + L +L
Sbjct: 63 DGA--FATLPSVHILLLGGNRLKTLPGSAFDGLNRLTTLDLSNNFMVHIPTTTLRRLPSL 120
Query: 179 DSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+++ N+I + N +L S L L YL L N++++ G+K L+ + L N+I K
Sbjct: 121 KMLAMSANKIRTFNGALPSDLRSLEYLDLGRNEISQIEPGSFEGMKSLKVLKLDVNQIRK 180
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 38/230 (16%)
Query: 48 NNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEGQL-G 103
N I+ I +F +++ L + N + ++ S RGL +L + LN+N+L L
Sbjct: 152 NEISQIEPGSFEGMKSLKVLKLDVNQIRKVDASTFRGLENLESIHLNDNQLLVFPSALLS 211
Query: 104 TLSKLQLLVIEQNQLEALPSDI-------------------------QLFSQLGSLYANN 138
+L KLQ + ++ N++ L + + F L +L
Sbjct: 212 SLQKLQKVHLDYNRIAVLSPAVVSPGMNIRELSLAYNLIAEIPNGTFKSFPSLETLNLRG 271
Query: 139 NRITSLD-GLLRGLTK-LQVFNMDFNQITMVRRDEFQ-NLHNLDSISLQNNQITSMNSS- 194
N+IT+L G L GL K L ++ N I D Q + NL +SL N++T++ SS
Sbjct: 272 NKITTLSSGNLGGLQKSLMALDLGDNGIV---SDSLQLDFPNLQLLSLGMNKLTALPSSA 328
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN--KFGTRN 242
LS L KL L L NQ+ + + + L+ L+ +DL YN I +FG +
Sbjct: 329 LSALRKLKRLDLRSNQIRDLPVGSLAALRELQFLDLGYNNIAEIRFGVED 378
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 110 LLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMV 167
+L I N E +PS + L L + NRI + G L+ LQ N+ N+I+++
Sbjct: 2 VLHINGNNFEDVPSSSLVDLPALTWLSLDENRIEHVPKGAFPHLSSLQTLNLTSNKISVI 61
Query: 168 RRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
F L ++ + L N++ ++ S+ GL +L L LS+N + +R L L+
Sbjct: 62 EDGAFATLPSVHILLLGGNRLKTLPGSAFDGLNRLTTLDLSNNFMVHIPTTTLRRLPSLK 121
Query: 227 TVDLSYNKINKF 238
+ +S NKI F
Sbjct: 122 MLAMSANKIRTF 133
>gi|260806809|ref|XP_002598276.1| hypothetical protein BRAFLDRAFT_165792 [Branchiostoma floridae]
gi|229283548|gb|EEN54288.1| hypothetical protein BRAFLDRAFT_165792 [Branchiostoma floridae]
Length = 496
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 56 NAFPPTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVI 113
N P T L + N + ++ NN+ GL++L +L+L NN + +L +G LS L+ L I
Sbjct: 24 NNIPNTTTWLDMRDNGIQTIKNNTFIGLSNLMYLYLRNNVITTLSDGTFSGLSNLRGLYI 83
Query: 114 EQNQLEALPSDI--QLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRD 170
N + + SD LF L L N+N + S+ +G GL+ +Q +D+N IT ++ D
Sbjct: 84 RYNLIRKIHSDTFNGLF-NLEDLNLNHNFVRSIANGAFVGLSNIQNLYVDYNSITTLKND 142
Query: 171 EFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
F L +L + L NN +T++ S + S L+ L YLYLS+N +T L L+ +
Sbjct: 143 TFSGLSSLQYLYLSNNAVTAIESGTFSSLSSLQYLYLSNNAITAIESGTFSSLSSLQDLW 202
Query: 230 LSYNKI 235
L+ N I
Sbjct: 203 LNDNGI 208
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 7/215 (3%)
Query: 28 PLTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRGLTDL 85
+ S +L L L +N I I AF ++ L + N + N++ GL+ L
Sbjct: 186 AIESGTFSSLSSLQDLWLNDNGIITIDSGAFSGLGNLQTLDLDDNVIIIRNDTFVGLSRL 245
Query: 86 NW-LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRIT 142
L+L NN + ++E G +LS LQ L ++ N + + S + S L LY NN IT
Sbjct: 246 YRDLYLRNNGITAIESGAFSSLSNLQNLYLQNNSIATIDSGTFIGLSNLYYLYLQNNHIT 305
Query: 143 S-LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTK 200
+ + G GL L N+D N IT + + F L L S+ L+NN I + S + S L+
Sbjct: 306 TVISGAFSGLDNLWTLNLDDNSITNISYNIFAGLSRLSSLHLRNNGIIQIESGTFSSLSN 365
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L YL L +N +T + RGL LRT++L N I
Sbjct: 366 LNYLNLQNNDITTIDNEVFRGLGNLRTLNLDDNII 400
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 30/180 (16%)
Query: 43 LLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKS-L 98
L L NN IT I AF ++ L++ N++ ++++ + GL++L +L+L NN + + +
Sbjct: 249 LYLRNNGITAIESGAFSSLSNLQNLYLQNNSIATIDSGTFIGLSNLYYLYLQNNHITTVI 308
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNN------------------ 139
G L L L ++ N + + +I S+L SL+ NN
Sbjct: 309 SGAFSGLDNLWTLNLDDNSITNISYNIFAGLSRLSSLHLRNNGIIQIESGTFSSLSNLNY 368
Query: 140 ------RITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
IT++D + RGL L+ N+D N IT + D F L +L + L NN I +++
Sbjct: 369 LNLQNNDITTIDNEVFRGLGNLRTLNLDDNIITSICNDTFIGLSHLYYLHLSNNSIANID 428
>gi|260826692|ref|XP_002608299.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
gi|229293650|gb|EEN64309.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
Length = 2303
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 112/225 (49%), Gaps = 27/225 (12%)
Query: 39 ALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L+ L + N++T I EN + +L NN++S+ + L +L +L L +N+L+
Sbjct: 952 SLVDLDISRNSVTSIPENICLLANMERLTASHNNISSIIRDVCELPNLEYLDLRHNQLEK 1011
Query: 98 LEGQLGTLSKLQLLVIEQNQ------------------------LEALPSDIQLFSQLGS 133
+ +G+LS+L++L++ N+ L ++PS + + L
Sbjct: 1012 VPTDIGSLSQLRVLLLSGNKIAYVTTIDLAKAVELVLLDLSRNLLTSIPSSVCQSASLRV 1071
Query: 134 LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
L N N+I + + T L + N+I +V R E LHNL + L N ++++
Sbjct: 1072 LKLNENKIEGVPTYISRATGLTELQLRGNRIFVVCR-EVSELHNLRKVDLSYNHLSTLPL 1130
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
S+ ++ L L +SHN++ +L D++ +K++RT NKI++
Sbjct: 1131 SICHMSNLEALDISHNRIY-YLSSDVQKMKKIRTFRAVGNKIHQL 1174
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 7/198 (3%)
Query: 43 LLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++L +NNI ++ +A PP + L + N ++ L +SL + +L L L +NR+ S G
Sbjct: 1187 VVLHDNNI-NLLPSAMPPNVVTLDLSCNGISRLGSSLGQMQNLEVLNLADNRVDSCRGVF 1245
Query: 103 G--TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
G T L++L + N + ALP +I L SL A N I+ L L + L+V D
Sbjct: 1246 GPNTFPSLRVLNVRNNAIMALP-NIGHLRSLTSLDATANSISDLVDLCNA-SDLRVLKAD 1303
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
N IT V DE L +++ +SL N + ++ LS L+K+ L + LTE + ++
Sbjct: 1304 NNLITEV-PDEIAKLEHIELLSLSGNWLDDLSPHLSELSKIRRLVFNSCMLTE-VPPEVG 1361
Query: 221 GLKRLRTVDLSYNKINKF 238
L+ LR+++L N++ F
Sbjct: 1362 ELRTLRSIELKDNELADF 1379
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 22/185 (11%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L S+ S+ GL L LFL NR++ + + L +LQ+L + N++ +P+ + S L
Sbjct: 550 LDSVPYSILGLCKLRCLFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGEISTL 609
Query: 132 GSLYANNNRITSLDGLLR------------GLTKLQVFNMDFNQITMVRR---------D 170
S+ N +T L + R GL L ++ +Q+ +R +
Sbjct: 610 QSVNVERNWVTDLTPICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPE 669
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+F L L + L N I S+ S S L L+ L L+ N ++ F ++ G+ L +DL
Sbjct: 670 QFGKLSRLKVLDLTKNNIESLPDSFSSLNALSVLRLASNDMSSFPT-EVCGINTLTDIDL 728
Query: 231 SYNKI 235
S NKI
Sbjct: 729 SSNKI 733
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 28/200 (14%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L +G NN+ S + L L L L++ RLKS+ + L+ L+ L + N++ +
Sbjct: 217 LRVLKLGGNNVCSFE-VMPALQCLEELDLSDMRLKSIPKEAFYLTNLKTLKLNNNKIRTI 275
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLT-------------------------KLQV 156
P+DI+ L +L +NN+I+S+ +L + L+
Sbjct: 276 PADIERPMALQTLLLDNNKISSVSEVLDKMKFLRHLSLSNNNLTDSGFPVDDVDIISLEH 335
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
N+D N++T + +Q L +S + N+I + ++GL + L L +N++ + +
Sbjct: 336 LNLDGNKLTAIPTCVYQA-QKLVCLSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQ-VA 393
Query: 217 DDIRGLKRLRTVDLSYNKIN 236
DD+ L +R +DLS N++N
Sbjct: 394 DDVAELCEIRHLDLSENRLN 413
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++G N L SL +L L+ L L ++NRL SL Q G LS+L++L + +N +E+L
Sbjct: 631 LETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQFGKLSRLKVLDLTKNNIESL 690
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + L L +N ++S + G+ L ++ N+I + L N++++
Sbjct: 691 PDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIPSLPFG-VGLLENVEAL 749
Query: 182 SLQNNQIT-SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L N++ M+ +S +T L +L LS +T+ + + I L+ L +++S NK+
Sbjct: 750 NLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTK-VPETISRLEELEYLNISSNKL 803
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 44/221 (19%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ---- 117
+R L + N + ++ S+ L +L L L++N+++ + QLG +S LQ + +E+N
Sbjct: 563 LRCLFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGEISTLQSVNVERNWVTDL 622
Query: 118 ------------------LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
L +LP ++ SQL L A++NR+TSL L++L+V ++
Sbjct: 623 TPICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQFGKLSRLKVLDL 682
Query: 160 -------------DFNQITMVR---------RDEFQNLHNLDSISLQNNQITSMNSSLSG 197
N ++++R E ++ L I L +N+I S+ +
Sbjct: 683 TKNNIESLPDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIPSLPFGVGL 742
Query: 198 LTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L + L LS N+L + + D I + L+ +DLS + K
Sbjct: 743 LENVEALNLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKV 783
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 40 LITLLLVNNNITHIHENAF-PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L L N N+ I E F ++ L V N +T + S+ L L L ++ NR+ S
Sbjct: 104 LVELDLSNQNLRSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLRILDVSGNRISSF 163
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ TL L+ L I + QL+ +P ++ +L L +NN++ L L L +L+V
Sbjct: 164 --PISTLGTLKELYISRVQLQTIPEEVFALEELEVLDISNNKVKYLPVKLGKLYRLRVLK 221
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ N + + L L+ + L + ++ S+ LT L L L++N++ D
Sbjct: 222 LGGNNVCSF--EVMPALQCLEELDLSDMRLKSIPKEAFYLTNLKTLKLNNNKIRTIPADI 279
Query: 219 IRGLKRLRTVDLSYNKIN 236
R + L+T+ L NKI+
Sbjct: 280 ERPMA-LQTLLLDNNKIS 296
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L + L+ L L L +L L +++N ++++ + L KL++L + L++
Sbjct: 493 CLKTLSLDGCRLSGLPRELFELPNLEVLDISDNDIRTIPTAIENLKKLKVLRANRLFLDS 552
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P I +L L+ NRI + + L +LQV ++ N+I + + + L S
Sbjct: 553 VPYSILGLCKLRCLFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPA-QLGEISTLQS 611
Query: 181 ISLQNNQITSMNS------------------SLSG----LTKLAYLYLSHNQLTEFLLDD 218
++++ N +T + SL G L++L +L SHN+LT L +
Sbjct: 612 VNVERNWVTDLTPICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTS-LPEQ 670
Query: 219 IRGLKRLRTVDLSYNKI 235
L RL+ +DL+ N I
Sbjct: 671 FGKLSRLKVLDLTKNNI 687
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 33 DLKGTPALITLLLVNNNITHIHE----NAFPPTIRKLHVGFNNLTSLNNSLRG--LTDLN 86
D++ AL TLLL NN I+ + E F +R L + NNLT + + L
Sbjct: 278 DIERPMALQTLLLDNNKISSVSEVLDKMKF---LRHLSLSNNNLTDSGFPVDDVDIISLE 334
Query: 87 WLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L+ N+L ++ + KL L E N++ LP +I + L NNRI +
Sbjct: 335 HLNLDGNKLTAIPTCVYQAQKLVCLSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVAD 394
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
+ L +++ ++ N++ + + H ++S+ L N++ + +S L +L L L
Sbjct: 395 DVAELCEIRHLDLSENRLNGIHPSILEMRH-MESLDLSKNRVIKIPREISHLRRLQTLKL 453
Query: 207 SHNQLTE-----FLLDDIRGL 222
L E F +DD+R L
Sbjct: 454 RGTDLREVNEELFTIDDLREL 474
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 25/217 (11%)
Query: 47 NNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTL 105
+N + +I F P + +L N L L +D+ L L N L L + TL
Sbjct: 800 SNKLQYIPSEMFELPFLEELDASDNVLKELPVDAVQESDVERLLLGGNHLDELSRNINTL 859
Query: 106 SKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT------------- 152
L+ L + +N L LP + L L + NR+ GL
Sbjct: 860 MYLERLDLSRNNLRDLPESLSFLPCLEILNLSGNRLRHFPPEFSGLMLEVLDLSDNGLRF 919
Query: 153 ---------KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
LQ N+ N+I ++ D L +L + + N +TS+ ++ L +
Sbjct: 920 VPREVTDMLSLQTLNISRNRIKVI-GDRMCQLDSLVDLDISRNSVTSIPENICLLANMER 978
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L SHN ++ ++ D+ L L +DL +N++ K T
Sbjct: 979 LTASHNNISS-IIRDVCELPNLEYLDLRHNQLEKVPT 1014
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-- 147
L++ L L + + +Q L + N L ++P DI+ L L + NRI L
Sbjct: 41 LSDRCLSHLSVGVCKMEDIQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRIVEYSFLSK 100
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
LR L +L + N + I +E N+H+L+ + + NN IT + S+ L L L +S
Sbjct: 101 LRTLVELDLSNQNLRSIP----EEVFNIHSLEILRVANNGITEIPKSILKLKGLRILDVS 156
Query: 208 HNQLTEFLLDDIRGLKRL 225
N+++ F + + LK L
Sbjct: 157 GNRISSFPISTLGTLKEL 174
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 26/252 (10%)
Query: 14 ALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNL 72
A L+ L E + +++ G + L L NN I + ++ A IR L + N L
Sbjct: 353 AQKLVCLSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVADDVAELCEIRHLDLSENRL 412
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
++ S+ + + L L+ NR+ + ++ L +LQ L + L + ++ L
Sbjct: 413 NGIHPSILEMRHMESLDLSKNRVIKIPREISHLRRLQTLKLRGTDLREVNEELFTIDDLR 472
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L N + + L L+ ++D +++ + R+ F+ L NL+ + + +N I ++
Sbjct: 473 ELDIGQNPRMFISEKVSKLRCLKTLSLDGCRLSGLPRELFE-LPNLEVLDISDNDIRTIP 531
Query: 193 SSLS-----------------------GLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+++ GL KL L+L N++ + + + I LK L+ +D
Sbjct: 532 TAIENLKKLKVLRANRLFLDSVPYSILGLCKLRCLFLQGNRIQK-ISESISMLKELQVLD 590
Query: 230 LSYNKINKFGTR 241
LS NKI + +
Sbjct: 591 LSDNKIRRIPAQ 602
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 101/249 (40%), Gaps = 55/249 (22%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTS--LNNSLRGLTD---LNWLFLNN 92
P L L L N + H FPP L + +L+ L R +TD L L ++
Sbjct: 883 PCLEILNLSGNRLRH-----FPPEFSGLMLEVLDLSDNGLRFVPREVTDMLSLQTLNISR 937
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLT 152
NR+K + ++ L L L I +N + ++P +I L + + L A++N I+S+ + L
Sbjct: 938 NRIKVIGDRMCQLDSLVDLDISRNSVTSIPENICLLANMERLTASHNNISSIIRDVCELP 997
Query: 153 KLQVFNMDFNQITMVRRD-----------------------EFQNLHNLDSISLQNNQIT 189
L+ ++ NQ+ V D + L + L N +T
Sbjct: 998 NLEYLDLRHNQLEKVPTDIGSLSQLRVLLLSGNKIAYVTTIDLAKAVELVLLDLSRNLLT 1057
Query: 190 SMNSSLSGLTKLAYLYLSHNQ-------------LTEF---------LLDDIRGLKRLRT 227
S+ SS+ L L L+ N+ LTE + ++ L LR
Sbjct: 1058 SIPSSVCQSASLRVLKLNENKIEGVPTYISRATGLTELQLRGNRIFVVCREVSELHNLRK 1117
Query: 228 VDLSYNKIN 236
VDLSYN ++
Sbjct: 1118 VDLSYNHLS 1126
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N + L + GL D+ L L NNR++ + + L +++ L + +N+L + I
Sbjct: 364 NRIRVLPEEIAGLKDIRVLKLKNNRIRQVADDVAELCEIRHLDLSENRLNGIHPSILEMR 423
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+ SL + NR+ + + L +LQ + + V + F + +L + + N
Sbjct: 424 HMESLDLSKNRVIKIPREISHLRRLQTLKLRGTDLREVNEELF-TIDDLRELDIGQNPRM 482
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE 243
++ +S L L L L +L+ L ++ L L +D+S N I T E
Sbjct: 483 FISEKVSKLRCLKTLSLDGCRLSG-LPRELFELPNLEVLDISDNDIRTIPTAIE 535
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLV---IEQNQL 118
I+ L + N LTS+ + + L +L L L+ NR+ + LSKL+ LV + L
Sbjct: 59 IQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRIV----EYSFLSKLRTLVELDLSNQNL 114
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
++P ++ L L NN IT + + L L++ ++ N+I+ L L
Sbjct: 115 RSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLRILDVSGNRISSF---PISTLGTL 171
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + Q+ ++ + L +L L +S+N++ ++L + L RLR + L N + F
Sbjct: 172 KELYISRVQLQTIPEEVFALEELEVLDISNNKV-KYLPVKLGKLYRLRVLKLGGNNVCSF 230
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAF-PPTIRKLHVGFNNLTSLNNSLRGLTDLNW 87
+T+ DL L+ L L N +T I + ++R L + N + + + T L
Sbjct: 1035 VTTIDLAKAVELVLLDLSRNLLTSIPSSVCQSASLRVLKLNENKIEGVPTYISRATGLTE 1094
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL 147
L L NR+ + ++ L L+ + + N L LP I S L +L ++NRI L
Sbjct: 1095 LQLRGNRIFVVCREVSELHNLRKVDLSYNHLSTLPLSICHMSNLEALDISHNRIYYLSSD 1154
Query: 148 LRGLTKLQVFNMDFN-------QITMVRRDEFQNLH-------------NLDSISLQNNQ 187
++ + K++ F N QI + R E LH N+ ++ L N
Sbjct: 1155 VQKMKKIRTFRAVGNKIHQLPEQILKLDRLEHVVLHDNNINLLPSAMPPNVVTLDLSCNG 1214
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
I+ + SSL + L L L+ N+ +D RG+
Sbjct: 1215 ISRLGSSLGQMQNLEVLNLADNR-----VDSCRGV 1244
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 3/181 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L + +T + ++ L +L +L +++N+L+ + ++ L L+ L N L+
Sbjct: 769 SLKHLDLSQTGMTKVPETISRLEELEYLNISSNKLQYIPSEMFELPFLEELDASDNVLKE 828
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP D S + L N + L + L L+ ++ N + + + L L+
Sbjct: 829 LPVDAVQESDVERLLLGGNHLDELSRNINTLMYLERLDLSRNNLRDL-PESLSFLPCLEI 887
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
++L N++ SGL L L LS N L F+ ++ + L+T+++S N+I G
Sbjct: 888 LNLSGNRLRHFPPEFSGLM-LEVLDLSDNGL-RFVPREVTDMLSLQTLNISRNRIKVIGD 945
Query: 241 R 241
R
Sbjct: 946 R 946
>gi|229608985|gb|ACQ83319.1| RT02475p [Drosophila melanogaster]
Length = 928
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV--GFNNLTSLN-NSLRGLTDL 85
++S+ L P L TL L N + I N+FP + +H+ FN +T++N +S L +L
Sbjct: 245 ISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNL 304
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+NNRL +L ++ L++L+ L + NQLE S + + +L +N+I +L
Sbjct: 305 TDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWSTFRGLESMKNLQLKSNKIRAL 364
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LA 202
DG+ + K++ ++ NQI+ + R NL L ++L N I+ + T+ L
Sbjct: 365 QDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLE 424
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS+N + EF + L RL+T++L++N++
Sbjct: 425 VLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRL 457
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G L L+L NN+IT I + P +R L + N L ++ NS +L L L+
Sbjct: 228 GLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSF 287
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNNRITSLDGLL 148
N + ++ E TL+ L L + N+L LP I++F QL L N N++
Sbjct: 288 NEITNVNEHSFATLNNLTDLELSNNRLSTLP--IRVFKNLNQLKKLALNFNQLEINWSTF 345
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLS 207
RGL ++ + N+I ++ F +H +++I L NQI+S++ L LTKL +L LS
Sbjct: 346 RGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLS 405
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N ++ +D + L +DLS N IN+F
Sbjct: 406 FNAISRIEVDTWEFTQSLEVLDLSNNAINEF 436
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Query: 88 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L NN+L ++ L L + +++N LE +P I L S L L NN ITS+
Sbjct: 189 LHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFIGL-SGLKHLVLANNHITSISS 247
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
L L L+ ++ N++ + + F +NL + L N+IT++N S + L L L
Sbjct: 248 ESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDL 307
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LS+N+L+ + + L +L+ + L++N++
Sbjct: 308 ELSNNRLSTLPIRVFKNLNQLKKLALNFNQL 338
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E +NL NL +SL+ N + + GL+ L +L L++N +T + + L LRT+DL
Sbjct: 203 EIRNLLNLTKVSLKRNLLEVI-PKFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDL 261
Query: 231 SYNKIN 236
S NK++
Sbjct: 262 SRNKLH 267
>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 633
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 22 PETGSHPLTSDDLKGTPALITLLLVNNNITHIHE--------NAFP------PTIRKLHV 67
P+ + L S+ L P I N +TH+ E FP T++ L++
Sbjct: 165 PKIQTLCLQSNRLTEIPTEI------NQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNL 218
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N + ++ L+ L L ++R+K+L +GTLS LQ L + +++ LP +Q
Sbjct: 219 SGNKFHCVPVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQLPESMQQ 278
Query: 128 FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
Q+G L +NNRI ++ L+ L + NQ+ + + NL L +SL NN
Sbjct: 279 LKQIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHL-PESIGNLRKLSHLSLSNNH 337
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ + S+ L +L L ++ NQL + L I L LR ++L N+++
Sbjct: 338 LKKLPDSIGNLAQLMVLSVARNQL-DALPATIGKLSELRELNLEQNQLS 385
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
+N L L SL L +L+ L ++ N+L L +G L +L LL + NQL+ LP +
Sbjct: 427 YNQLQVLPKSLGKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSLGKL 486
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
L L + N++T L ++ L KL + ++++N +T + + L + ++L+ NQ+
Sbjct: 487 KNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALTAL-PESIGQLSKVVHLNLEGNQL 545
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
T + S+ L+K+ +L L NQLT+ L I ++ L ++L N++ K
Sbjct: 546 TQLPESIGQLSKVVHLNLEGNQLTQ-LPKSIGNMRSLYALNLKNNQLTKL 594
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P I+ L + N LT + + LT L L LNNN+L + L+ L+ L + N+
Sbjct: 165 PKIQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGNKFH 224
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P +I S+L + ++RI +L + L+ LQ + +I + + Q L +
Sbjct: 225 CVPVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQL-PESMQQLKQIG 283
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++L NN+I + ++ L+ L YL L NQL + L + I L++L + LS N + K
Sbjct: 284 KLALDNNRIEKFPAVITKLSSLVYLKLQKNQL-KHLPESIGNLRKLSHLSLSNNHLKKL 341
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 48 NNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
N +TH+ PP I LH + +N L L SL L +L+ L ++ N+L L
Sbjct: 451 NKLTHL-----PPGIGNLHRLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTELPKI 505
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+ L KL LL + N L ALP I S++ L N++T L + L+K+ N++
Sbjct: 506 IYDLKKLFLLSLNYNALTALPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEG 565
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
NQ+T + + N+ +L +++L+NNQ+T + ++ L L +L L N +
Sbjct: 566 NQLTQLPKS-IGNMRSLYALNLKNNQLTKLPQTIQKLRGLRFLLLDKNPI 614
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 115/226 (50%), Gaps = 14/226 (6%)
Query: 23 ETGSHPLTSDDLKGTPALITLL-------LVNNNITHIHENAFPPTIRKL-HVGF--NNL 72
+ G L ++ ++ PA+IT L L N + H+ E+ +RKL H+ N+L
Sbjct: 281 QIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIG--NLRKLSHLSLSNNHL 338
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
L +S+ L L L + N+L +L +G LS+L+ L +EQNQL LP + L
Sbjct: 339 KKLPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLT 398
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L N++T L L L +L + N+ +NQ+ ++ + L NL +S+ N++T +
Sbjct: 399 QLKLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKS-LGKLKNLHQLSVDGNKLTHLP 457
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L +L+ L LS+NQL + L + LK L + + NK+ +
Sbjct: 458 PGIGNLHRLSLLNLSYNQL-QVLPKSLGKLKNLHQLSVDGNKLTEL 502
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
+ K+Q L ++ N+L +P++I + L L NNN++T + LT L+ N+ N+
Sbjct: 164 IPKIQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGNKF 223
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
V + L L + +L++++I ++ ++ L+ L L LS ++ + L + ++ LK+
Sbjct: 224 HCVPVN-IGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQ-LPESMQQLKQ 281
Query: 225 LRTVDLSYNKINKF 238
+ + L N+I KF
Sbjct: 282 IGKLALDNNRIEKF 295
>gi|417760348|ref|ZP_12408374.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|417774427|ref|ZP_12422292.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|418675361|ref|ZP_13236652.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
gi|409943915|gb|EKN89506.1| leucine rich repeat protein [Leptospira interrogans str.
2002000624]
gi|410575760|gb|EKQ38777.1| leucine rich repeat protein [Leptospira interrogans str.
2002000621]
gi|410577523|gb|EKQ45393.1| leucine rich repeat protein [Leptospira interrogans str.
2002000623]
Length = 412
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 83 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 142
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 143 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 201
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 202 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 232
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 152 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 211
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 212 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLK 271
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+ ++ ++ L +L LYL +NQL FL
Sbjct: 272 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLN-FL 326
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 327 PNKVEQLQNLESLDLEHNQLNAL 349
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 26 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 83
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 84 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 143
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 144 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 201
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 202 GLDHNQLN 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 267 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNFL 326
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 327 PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 385
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 386 YLHNNPLPS 394
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 264 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 323
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 324 NFLPNKVEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 382
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 383 KKLYLHNNPLPSEKIERIRKL 403
>gi|417785509|ref|ZP_12433213.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|409951374|gb|EKO05889.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
Length = 426
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+T++ ++ L +L LYL +NQL FL
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLN-FL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNAL 363
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 397 KKLYLHNNPLPSEKIERIRKL 417
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
++G L LQ L + +NQL LP +I L L + N++T+L + L +LQ +
Sbjct: 274 EIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLG 333
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQ+ + ++ + L NL+S+ L++NQ+ ++ + L KL L L +NQL L ++I+
Sbjct: 334 NNQLNFL-PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLA-TLPEEIK 391
Query: 221 GLKRLRTVDLSYNKI 235
LK L+ + L N +
Sbjct: 392 QLKNLKKLYLHNNPL 406
>gi|281363494|ref|NP_611091.2| lambik [Drosophila melanogaster]
gi|272432509|gb|AAF58053.2| lambik [Drosophila melanogaster]
Length = 1252
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV--GFNNLTSLN-NSLRGLTDL 85
++S+ L P L TL L N + I N+FP + +H+ FN +T++N +S L +L
Sbjct: 352 ISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNL 411
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+NNRL +L ++ L++L+ L + NQLE S + + +L +N+I +L
Sbjct: 412 TDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWSTFRGLESMKNLQLKSNKIRAL 471
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LA 202
DG+ + K++ ++ NQI+ + R NL L ++L N I+ + T+ L
Sbjct: 472 QDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLE 531
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS+N + EF + L RL+T++L++N++
Sbjct: 532 VLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRL 564
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G L L+L NN+IT I + P +R L + N L ++ NS +L L L+
Sbjct: 335 GLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSF 394
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNNRITSLDGLL 148
N + ++ E TL+ L L + N+L LP I++F QL L N N++
Sbjct: 395 NEITNVNEHSFATLNNLTDLELSNNRLSTLP--IRVFKNLNQLKKLALNFNQLEINWSTF 452
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLS 207
RGL ++ + N+I ++ F +H +++I L NQI+S++ L LTKL +L LS
Sbjct: 453 RGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLS 512
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N ++ +D + L +DLS N IN+F
Sbjct: 513 FNAISRIEVDTWEFTQSLEVLDLSNNAINEF 543
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Query: 88 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L NN+L ++ L L + +++N LE +P I L S L L NN ITS+
Sbjct: 296 LHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFIGL-SGLKHLVLANNHITSISS 354
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
L L L+ ++ N++ + + F +NL + L N+IT++N S + L L L
Sbjct: 355 ESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDL 414
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LS+N+L+ + + L +L+ + L++N++
Sbjct: 415 ELSNNRLSTLPIRVFKNLNQLKKLALNFNQL 445
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L + N N T++ E +NL NL +SL+ N + + GL+ L +L L++N +T
Sbjct: 296 LHLANNKLNDTTVL---EIRNLLNLTKVSLKRNLLEVI-PKFIGLSGLKHLVLANNHITS 351
Query: 214 FLLDDIRGLKRLRTVDLSYNKIN 236
+ + L LRT+DLS NK++
Sbjct: 352 ISSESLAALPLLRTLDLSRNKLH 374
>gi|124008534|ref|ZP_01693226.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123985908|gb|EAY25765.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 356
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N L+ L + L L L + N L L ++G + L++L + NQL++L
Sbjct: 96 LKNLHLNENFLSDLPTQIGYLPQLQNLLVAKNELARLLPEIGQIKSLEVLQVYDNQLQSL 155
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS++Q L L+ N N+I ++ L +LQ+ + NQ++ V + NL +L +
Sbjct: 156 PSELQQCKHLKYLFINGNKIQDFPEVICSLPRLQILALQHNQLSNVSA-QIGNLRHLGHL 214
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLL 216
++ +N++ + ++ L K+ L L+HN+L EF L
Sbjct: 215 NVSHNRLKDLPDTIGLLKKVGILELNHNRLAEFPL 249
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 27/224 (12%)
Query: 38 PALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
P L LL+ N + + E ++ L V N L SL + L+ L +LF+N N+++
Sbjct: 117 PQLQNLLVAKNELARLLPEIGQIKSLEVLQVYDNQLQSLPSELQQCKHLKYLFINGNKIQ 176
Query: 97 SLEGQLGTLSKLQLLVIEQNQ-----------------------LEALPSDIQLFSQLGS 133
+ +L +LQ+L ++ NQ L+ LP I L ++G
Sbjct: 177 DFPEVICSLPRLQILALQHNQLSNVSAQIGNLRHLGHLNVSHNRLKDLPDTIGLLKKVGI 236
Query: 134 LYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
L N+NR+ + + L M NQ+ V F +L L ++L NN I +N
Sbjct: 237 LELNHNRLAEFPLAILEMNALAKLWMTHNQLRQVPAGVF-DLPQLYQLNLSNNCIDQVNF 295
Query: 194 SLSGLT-KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
S++ + L+L++NQ++ L I LK L+ +D+ N ++
Sbjct: 296 SITNTQGSIVKLWLANNQISR-LPSSISYLKNLQLLDVQNNPMS 338
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P ++ L + N L++++ + L L L +++NRLK L +G L K+ +L + N+L
Sbjct: 186 PRLQILALQHNQLSNVSAQIGNLRHLGHLNVSHNRLKDLPDTIGLLKKVGILELNHNRLA 245
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
P I + L L+ +N++ + + L +L N+ N I V ++
Sbjct: 246 EFPLAILEMNALAKLWMTHNQLRQVPAGVFDLPQLYQLNLSNNCIDQVNFSITNTQGSIV 305
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
+ L NNQI+ + SS+S L L L + +N ++ + +I
Sbjct: 306 KLWLANNQISRLPSSISYLKNLQLLDVQNNPMSPEHVQEI 345
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L LP+++ +L +L+ N N ++ L + L +LQ + N++ + E + +
Sbjct: 83 LVKLPAEVVALRRLKNLHLNENFLSDLPTQIGYLPQLQNLLVAKNELARL-LPEIGQIKS 141
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L+ + + +NQ+ S+ S L L YL+++ N++ +F + I L RL+ + L +N+++
Sbjct: 142 LEVLQVYDNQLQSLPSELQQCKHLKYLFINGNKIQDF-PEVICSLPRLQILALQHNQLSN 200
Query: 238 FGTR 241
+
Sbjct: 201 VSAQ 204
>gi|449269606|gb|EMC80365.1| Carboxypeptidase N subunit 2, partial [Columba livia]
Length = 277
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 7/220 (3%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-L 79
ET + S DL + L L+ +NN+I + AF P++ +L V N L +++ L
Sbjct: 54 ETALSSIHSGDLGPSTTLTKLVFLNNDIQELEAGAFLGLPSLVELEVSGNYLPAVSPGVL 113
Query: 80 RGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYAN 137
GL L+ L L NN ++SL+ G +LQ L + +N++E LP I + +L +L +
Sbjct: 114 VGLPSLSKLSLGNNAIRSLQPGLFAATYRLQDLCLARNKIEVLPPCIFRPLRRLQTLDLS 173
Query: 138 NNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SL 195
N + L GLL LT L++ + N + V F L L + L N + + + +
Sbjct: 174 QNVLVELPAGLLAPLTALRLLKLSDNLLAQVPPGTFGALGRLVELRLDGNHLQELPADTF 233
Query: 196 SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+GL L L L HN L D GL L + L N +
Sbjct: 234 AGLRALQRLQLQHNALASLAPDIFAGLPNLTVLSLEGNHL 273
>gi|456824980|gb|EMF73376.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 426
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+ ++ ++ L +L LYL +NQL FL
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLN-FL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNAL 363
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNFL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 397 KKLYLHNNPLPSEKIERIRKL 417
>gi|418723960|ref|ZP_13282794.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409962758|gb|EKO26492.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 426
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+ ++ ++ L +L LYL +NQL FL
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLN-FL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNAL 363
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNFL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L + IR L
Sbjct: 397 KKLYLHNNPLPSEKIARIRKL 417
>gi|417765447|ref|ZP_12413409.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400352384|gb|EJP04580.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 426
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+T++ ++ L +L LYL +NQL FL
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLN-FL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNAL 363
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 397 KKLYLHNNPLPSEKIERIRKL 417
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
++G L LQ L + +NQL LP +I L L + N++T+L + L +LQ +
Sbjct: 274 EIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLG 333
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQ+ + ++ + L NL+S+ L++NQ+ ++ + L KL L L +NQL L ++I+
Sbjct: 334 NNQLNFL-PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLA-TLPEEIK 391
Query: 221 GLKRLRTVDLSYNKI 235
LK L+ + L N +
Sbjct: 392 QLKNLKKLYLHNNPL 406
>gi|418709217|ref|ZP_13270011.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410770553|gb|EKR45772.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 412
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 83 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 142
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 143 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 201
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 202 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 232
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 152 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 211
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 212 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLK 271
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+ ++ ++ L +L LYL +NQL L
Sbjct: 272 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLN-VL 326
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 327 PNKLEQLQNLESLDLEHNQLNAL 349
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 264 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 323
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L L L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 324 NVLPNKLEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 382
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 383 KKLYLHNNPLPSEKIERIRKL 403
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 26 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 83
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 84 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 143
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 144 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 201
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 202 GLDHNQLN 209
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 267 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVL 326
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 327 PNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 385
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 386 YLHNNPLPS 394
>gi|379730485|ref|YP_005322681.1| hypothetical protein SGRA_2368 [Saprospira grandis str. Lewin]
gi|378576096|gb|AFC25097.1| leucine-rich repeat-containing protein [Saprospira grandis str.
Lewin]
Length = 509
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 25 GSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTD 84
G PL L+ AL L + N N+ + P + L + N L L ++ LT
Sbjct: 282 GELPLL---LQEIQALEELDMSNCNLVDLGAGLSLPALHWLDLSANQLRDLPSNFGQLTA 338
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITS 143
LNWL L +N+L+ L LS+++ L++ N L + SD+ + +L L + N +T
Sbjct: 339 LNWLDLRDNQLQKWPKALEGLSQIRQLLLAGNFLRQINLSDLD-WPELEELDLSKNELTE 397
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L G L +L+ N++ NQ+ + D ++ L NL+ + L +NQ+ S+ SL+ L ++ +
Sbjct: 398 LSGQWDKLPQLRQLNLEKNQLAQLPED-WRPLSNLEELDLSDNQLDSLPQSLAELDQIQW 456
Query: 204 LYLSHNQLTEF 214
L L +NQ TEF
Sbjct: 457 LDLRNNQFTEF 467
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G+N L SL L + L L L NNRL+ L L +L++L +E N L L
Sbjct: 225 LQSLFLGYNRLKSLAAELGNCSALEQLDLGNNRLERLPLNLARCQQLKVLNLEDNPLGEL 284
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q L L +N + L L L L ++ NQ+ + + F L L+ +
Sbjct: 285 PLLLQEIQALEELDMSNCNLVDLGAGL-SLPALHWLDLSANQLRDLPSN-FGQLTALNWL 342
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L++NQ+ +L GL+++ L L+ N L + L D+ L +DLS N++ +
Sbjct: 343 DLRDNQLQKWPKALEGLSQIRQLLLAGNFLRQINLSDL-DWPELEELDLSKNELTEL 398
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L LFL NRLKSL +LG S L+ L + N+LE LP ++ QL L +N +
Sbjct: 222 LNNLQSLFLGYNRLKSLAAELGNCSALEQLDLGNNRLERLPLNLARCQQLKVLNLEDNPL 281
Query: 142 TSLDGLLRGLTKLQVFNM-DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
L LL+ + L+ +M + N + + LH LD L NQ+ + S+ LT
Sbjct: 282 GELPLLLQEIQALEELDMSNCNLVDLGAGLSLPALHWLD---LSANQLRDLPSNFGQLTA 338
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L +L L NQL ++ + GL ++R + L+ N
Sbjct: 339 LNWLDLRDNQLQKW-PKALEGLSQIRQLLLAGN 370
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R L + N L+ L L +L L L NN+L++L G L L+ L++E+NQL A
Sbjct: 86 KLRWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQALPNNFGQLKALRKLLLERNQLSA 145
Query: 121 LPSDI-----------------QLFSQLG--------SLYANN-NRITSLDGLLRGLTKL 154
LP+ QL ++G SL AN ++T + G L L +L
Sbjct: 146 LPASFGQLQQLQQLDLSENAFTQLPEEIGQLKSLKQLSLSANPMPQLTKVLGQLSNLEEL 205
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
Q + ++ E L+NL S+ L N++ S+ + L + L L L +N+L
Sbjct: 206 QAEGLGLEEVP----KEIGQLNNLQSLFLGYNRLKSLAAELGNCSALEQLDLGNNRLERL 261
Query: 215 LLDDIRGLKRLRTVDLSYNKINKF 238
L+ R ++L+ ++L N + +
Sbjct: 262 PLNLAR-CQQLKVLNLEDNPLGEL 284
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 61 TIRKLHVGFNNLTSLNNSL---RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ 117
+++KL L L + +G+ LN + +NRLK L L L +L+ L I N+
Sbjct: 17 SLKKLDASRKGLQELPQEIGRSKGMKQLN---IEDNRLKDLPDSLANLGQLEWLDISDNR 73
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L LP + +L L +NN ++ L L +L ++ NQ+ + + F L
Sbjct: 74 LSPLPKVLFQLRKLRWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQALPNN-FGQLKA 132
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L + L+ NQ++++ +S L +L L LS N T+ L ++I LK L+ + LS N + +
Sbjct: 133 LRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQ-LPEEIGQLKSLKQLSLSANPMPQ 191
Query: 238 F 238
Sbjct: 192 L 192
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L + N L+ L L L L WL L+NN L L +L +L L ++ NQL+AL
Sbjct: 64 LEWLDISDNRLSPLPKVLFQLRKLRWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQAL 123
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++ L L N++++L L +LQ ++ N T + +E L +L +
Sbjct: 124 PNNFGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQL-PEEIGQLKSLKQL 182
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
SL N + + L L+ L L L E + +I L L+++ L YN++
Sbjct: 183 SLSANPMPQLTKVLGQLSNLEELQAEGLGLEE-VPKEIGQLNNLQSLFLGYNRLKSLAAE 241
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 53 IHENAF---PPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
+ ENAF P I ++L + N + L L L++L L L+ + ++G
Sbjct: 161 LSENAFTQLPEEIGQLKSLKQLSLSANPMPQLTKVLGQLSNLEELQAEGLGLEEVPKEIG 220
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L+ LQ L + N+L++L +++ S L L NNR+ L L +L+V N++ N
Sbjct: 221 QLNNLQSLFLGYNRLKSLAAELGNCSALEQLDLGNNRLERLPLNLARCQQLKVLNLEDNP 280
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
+ + Q + L+ + + N + + + LS L L +L LS NQL + L + L
Sbjct: 281 LGELPL-LLQEIQALEELDMSNCNLVDLGAGLS-LPALHWLDLSANQLRD-LPSNFGQLT 337
Query: 224 RLRTVDLSYNKINKFGTRNEG 244
L +DL N++ K+ EG
Sbjct: 338 ALNWLDLRDNQLQKWPKALEG 358
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 38 PALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
P L L L N +T + P +R+L++ N L L R L++L L L++N+L
Sbjct: 383 PELEELDLSKNELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWRPLSNLEELDLSDNQLD 442
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 139
SL L L ++Q L + NQ P + L QL +LY N
Sbjct: 443 SLPQSLAELDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLGEN 486
>gi|281204955|gb|EFA79149.1| villin [Polysphondylium pallidum PN500]
Length = 1501
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL++ FN L S+ ++ L L L L+NN+L ++ ++G LQ++ I N+LEAL
Sbjct: 91 LKKLNISFNQLQSIGANIALLKQLKVLNLSNNQLVAIPKEIGQSLSLQIINISFNKLEAL 150
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L +QL L NNN+I +L + L +L + ++ N++ + E L L +
Sbjct: 151 PKEIGLLNQLTKLVLNNNKIGTLPSDIGKLGQLTLLDLAENELKSLPH-EIGQLKQLAKL 209
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NN + S + L++L L L NQL + L + L +L VDL N+
Sbjct: 210 YLDNNDFLVLPSEVGQLSELKELNLRSNQLVD-LPSSMHKLTKLTLVDLEDNQ 261
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
+ L I L A P + ++L +L +N I LDG+ + LT L+ ++ +N + ++
Sbjct: 24 EFLEINGRHLVAFPMQLNQLTKLKTLSLAHNNIQKLDGVSQVLT-LEDLDLSYNSLQLL- 81
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
DE ++ NL +++ NQ+ S+ ++++ L +L L LS+NQL + + L L+ +
Sbjct: 82 SDELYHVVNLKKLNISFNQLQSIGANIALLKQLKVLNLSNNQLVAIPKEIGQSLS-LQII 140
Query: 229 DLSYNKIN 236
++S+NK+
Sbjct: 141 NISFNKLE 148
>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
[Acaryochloris marina MBIC11017]
Length = 659
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++++L++ FN L+ L + L +L L L N+L SL ++G L+ L+ LV+ NQL
Sbjct: 430 SLKELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNT 489
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP DI L SL + N ++SL + L+ L+ + N+++ + E LHNL+S
Sbjct: 490 LPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSL-PPEIGKLHNLNS 548
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
++L NQ++S+ + L L L L +N+L L ++ LK L VDLS N+++
Sbjct: 549 LNLVENQLSSLPIEMRKLQNLRELDLRNNRLRNLPL-EMGQLKSLGLVDLSDNQLS 603
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 23/248 (9%)
Query: 11 HAVALNLID-----LEPETG------SHPLTSDDLKGTPALIT-------LLLVNNNITH 52
H LNL D L PE G + L S+ L PA +T L L N ++H
Sbjct: 62 HLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQLSH 121
Query: 53 IH-ENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
+ E A ++ L + N LT+L +S+ L +L L L+NN LKSL ++ L+KL+ L
Sbjct: 122 LPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRL 181
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR-RD 170
+ +NQL LP +I + L +L +N ++SL + LT L+ +D ++ R
Sbjct: 182 DLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLK--KLDLRATSLKRLPP 239
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L L + L +N+++S+ ++ L L L L QL+ ++ L L+ +DL
Sbjct: 240 EILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFTQLSHP-PAELSQLTHLQELDL 298
Query: 231 SYNKINKF 238
S N ++
Sbjct: 299 SGNSLSSL 306
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Query: 54 HENA--FPPTIRKLHVGFNNLTSLNNSLRGL-TDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
ENA PPT + V + + + + L T + L L L L ++G L L++
Sbjct: 6 RENATGLPPTEKNPQVTPGYVEAQHRIQQALATQASQLDLQGLSLTQLPLEIGQLKHLEV 65
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + NQL LP +I L +L +NR+ L + LT L + FNQ++ +
Sbjct: 66 LNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQLSHLPM- 124
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E L +L S+ L NQ+T++ SS++ L +L L LS+N L + L +I L +LR +DL
Sbjct: 125 EMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWL-KSLPPEIAQLNKLRRLDL 183
Query: 231 SYNKIN 236
N+++
Sbjct: 184 FRNQLS 189
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 7/171 (4%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
N PP I + L + N L+SL + L+ L L L +NRL SL ++G L L
Sbjct: 488 NTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLN 547
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + +NQL +LP +++ L L NNR+ +L + L L + ++ NQ++ + +
Sbjct: 548 SLNLVENQLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPK 607
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
E L+NL +SL NQ++++ + L + + N L +L R
Sbjct: 608 -EMGQLYNLTVLSLDRNQLSNLPIEIEQLWPSTKITVEGNPLPSHILKRYR 657
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 68 GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG-----------------------QLGT 104
+N+L +L + LT L L L + +L SL ++GT
Sbjct: 322 SYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGT 381
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQI 164
L+ L+ L + + QL LP I +L SL + N+++SL + + L+ N+ FNQ+
Sbjct: 382 LTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQL 441
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
+ + D Q L+NL + L+ N++ S+ + L L L L NQL L DI LK
Sbjct: 442 SKLPADIGQ-LNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLN-TLPPDIGQLKN 499
Query: 225 LRTVDLSYNKINKF 238
L+++ + N ++
Sbjct: 500 LKSLSIHGNTLSSL 513
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 8/191 (4%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
++ PP I + L + F L+ L LT L L L+ N L SL ++ L KLQ
Sbjct: 258 SSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQ 317
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + N L LP+ I + L SL + ++ SL + L LQ ++ N +T + +
Sbjct: 318 KLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQ 377
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
E L +L ++L Q+T++ ++ L +L L S NQL+ + +I + L+ ++
Sbjct: 378 -EIGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPI-EITQIISLKELN 435
Query: 230 LSYNKINKFGT 240
LS+N+++K
Sbjct: 436 LSFNQLSKLPA 446
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Query: 71 NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ 130
+LT L + L L L L +N+L L ++G L L L + N+L LP+++ +
Sbjct: 49 SLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAEVTQLTT 108
Query: 131 LGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS 190
L L N+++ L + L LQ ++ NQ+T + Q L L ++ L NN + S
Sbjct: 109 LSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQ-LKELQTLDLSNNWLKS 167
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ ++ L KL L L NQL+ L +I L L+T+ L +N ++
Sbjct: 168 LPPEIAQLNKLRRLDLFRNQLS-GLPPEIIKLNNLQTLGLGHNTLSSLPA 216
>gi|195452978|ref|XP_002073584.1| GK13066 [Drosophila willistoni]
gi|194169669|gb|EDW84570.1| GK13066 [Drosophila willistoni]
Length = 650
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 17 LIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSL 75
L++L P+ G L L L +N ++ + F P +R L++ +N T L
Sbjct: 144 LVELPPQIGK----------LEKLTRLNLSHNKLSQLPRELFSLPVLRHLNISYNEFTEL 193
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
N + L L WL ++N+L+SL G +G L +L L++ N ++ LP D+ L L
Sbjct: 194 NPDVSDLHMLEWLDASHNKLQSLPGGIGFLVRLTSLLLPYNHIKELPPDLVNMRVLQKLD 253
Query: 136 ANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
N I L GL+R L L + + D ++ EF+ L + NN ITS+
Sbjct: 254 LMQNDIIKLPDDMGLIRKLECLYIQHNDIKELP-----EFEGNEALTEVHASNNYITSIP 308
Query: 193 SSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L + L L L NQ+T+ L D++ L+ L+ +D+S N I+
Sbjct: 309 KGLCTNLPHLKIFDLRDNQITQ-LPDEVCLLRNLQRLDVSNNSIS 352
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I L + N L+ L+ + L L L L++N L L Q+G L KL L + N+L L
Sbjct: 111 ITNLDLSSNTLSRLSPKIENLMTLTVLILHDNALVELPPQIGKLEKLTRLNLSHNKLSQL 170
Query: 122 P-----------------------SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
P D+ L L A++N++ SL G + L +L
Sbjct: 171 PRELFSLPVLRHLNISYNEFTELNPDVSDLHMLEWLDASHNKLQSLPGGIGFLVRLTSLL 230
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ +N I + D N+ L + L N I + + + KL LY+ HN + E L +
Sbjct: 231 LPYNHIKELPPD-LVNMRVLQKLDLMQNDIIKLPDDMGLIRKLECLYIQHNDIKE--LPE 287
Query: 219 IRGLKRLRTVDLSYNKI 235
G + L V S N I
Sbjct: 288 FEGNEALTEVHASNNYI 304
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 70 NNLTSLNNSLRGLTDL-NWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLF 128
N L +L N L+ + DL L L++N + + + +++ L + N L+ LP + +
Sbjct: 483 NKLGTLPNGLQYMRDLVKELVLSHNLISFVPQFISQFTRITFLNLSNNLLKELPKEFGVL 542
Query: 129 SQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQI 188
+ L L NNR + L L +L++ N I + + + L ++ L+NN I
Sbjct: 543 NTLRELNIANNRFDCIPSCLYELQRLEILVASENHIKELNVSGLKAMSCLATLDLRNNDI 602
Query: 189 TSMNSSLSGLTKLAYLYLSHN 209
+ L LT + +L L N
Sbjct: 603 EFIPPILGNLTNITHLELIGN 623
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 62 IRKL---HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT-LSKLQLLVIEQNQ 117
IRKL ++ N++ L G L + +NN + S+ L T L L++ + NQ
Sbjct: 269 IRKLECLYIQHNDIKELP-EFEGNEALTEVHASNNYITSIPKGLCTNLPHLKIFDLRDNQ 327
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
+ LP ++ L L L +NN I+ L L L L ++ N I +RRD Q
Sbjct: 328 ITQLPDEVCLLRNLQRLDVSNNSISVLPVTLSSLAHLVNLQVEGNPIKTIRRDIIQ 383
>gi|456970650|gb|EMG11404.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 426
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+ ++ ++ L +L LYL +NQL L
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLN-VL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 341 PNKLEQLQNLESLDLEHNQLNAL 363
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L L L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NVLPNKLEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 397 KKLYLHNNPLPSEKIERIRKL 417
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
>gi|241132583|ref|XP_002404531.1| leucine-rich transmembrane protein, putative [Ixodes scapularis]
gi|215493622|gb|EEC03263.1| leucine-rich transmembrane protein, putative [Ixodes scapularis]
Length = 732
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSL-----NNSLRGLTDLNWLFLNNNRLK 96
L L +N I + +N P++R L + FN +T + NS R L L LN+N++
Sbjct: 22 LHLAHNEIQSLGQNLLKYPSLRSLDLSFNKITVIPMGVFTNSSRLLQ----LSLNSNKVS 77
Query: 97 SLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSLDGL-LRGLTK 153
S+E G L L+ L+ L + +N L +P D+ L L L N NRI +++GL +GL
Sbjct: 78 SVEKGSLDNLTSLETLRLNKNHLVTIPKDLFLKLQALKQLELNKNRIRAIEGLSFKGLES 137
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLT 212
L+ ++ N I+ + F L + +++L N IT + L GL+ L L L+ N +T
Sbjct: 138 LESLSLRRNSISHLSDGAFYYLGKIQNLNLDFNNITVVTKGWLYGLSALKLLNLTGNSIT 197
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINKFGTRNEGK 245
E +D ++L +DL+ NK+ T K
Sbjct: 198 EVGMDGWEYCRKLTHLDLTSNKLQAITTSTFAK 230
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
KG +L +L L N+I+H+ + AF I+ L++ FNN+T + L GL+ L L L
Sbjct: 132 FKGLESLESLSLRRNSISHLSDGAFYYLGKIQNLNLDFNNITVVTKGWLYGLSALKLLNL 191
Query: 91 NNNRLKSLEGQLGT--LSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLD-G 146
N + + G G KL L + N+L+A+ S L LY +N ++ ++ G
Sbjct: 192 TGNSITEV-GMDGWEYCRKLTHLDLTSNKLQAITTSTFAKAESLRFLYLGHNMVSYIEEG 250
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYL 206
+ L L+ ++D N+I+ D N GL+ L L L
Sbjct: 251 AFKHLNHLKTLHLDHNEISWTMED--------------------TNGPFLGLSSLVQLTL 290
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S N + GL RL+++DLS N +
Sbjct: 291 SDNSIKSLTPRAFAGLGRLQSLDLSGNPV 319
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 113 IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEF 172
I N L +P D+ LG L+ +N I SL L L+ ++ FN+IT++ F
Sbjct: 2 ISHNHLIEIP-DLGNLQHLGELHLAHNEIQSLGQNLLKYPSLRSLDLSFNKITVIPMGVF 60
Query: 173 QNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
N L +SL +N+++S+ SL LT L L L+ N L D L+ L+ ++L+
Sbjct: 61 TNSSRLLQLSLNSNKVSSVEKGSLDNLTSLETLRLNKNHLVTIPKDLFLKLQALKQLELN 120
Query: 232 YNKI 235
N+I
Sbjct: 121 KNRI 124
>gi|86264151|gb|ABC87809.1| leucine-rich repeat protein [Penaeus monodon]
Length = 561
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 96/172 (55%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + ++++ + +S+ LT L +L +N+L +L ++G L LQ L + +N L +LP
Sbjct: 84 RLDLSNSSISQIPSSVHNLTHLVEFYLYSNKLTTLPPEIGCLVNLQTLGLSENSLTSLPD 143
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ +L L +N++ + ++ LT L + FN+I +V D +NL NL ++SL
Sbjct: 144 TLANLEKLRVLDLRHNKLCEIPDVVYKLTSLITLYLRFNRIRVVGED-IRNLKNLITLSL 202
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ N+I + + LT LA L +HN +E L ++I L+T+ L +N++
Sbjct: 203 RGNKIRQPPAGIGELTGLATLDAAHNH-SEHLSEEIGNCMCLQTLHLQHNEL 253
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N+LT + + + L L L L+NN L+ + +G L KL++L +E+N+LE LP
Sbjct: 386 ELNLGTNHLTKVPDDISCLQSLEVLILSNNNLRKIPSSIGNLRKLRVLDLEENRLEGLPP 445
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I L L +N++++L L L L ++ N ++ + +E L +L+++ +
Sbjct: 446 EIGFLKDLQRLIVQSNQLSALPRALGHLVNLTYLSVGENNLSYL-PEEIGTLESLETLYI 504
Query: 184 QNN-QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+N Q+ ++ L+ T L + + + L++ + + G
Sbjct: 505 NDNPQLHNLPFELALCTNLQIMSIENCPLSQIPPEIVAG 543
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 16 NLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV---GFNNL 72
N+++L T DD+ +L L+L NNN+ I + +RKL V N L
Sbjct: 383 NMVELNLGTNHLTKVPDDISCLQSLEVLILSNNNLRKIPSSIG--NLRKLRVLDLEENRL 440
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
L + L DL L + +N+L +L LG L L L + +N L LP +I L
Sbjct: 441 EGLPPEIGFLKDLQRLIVQSNQLSALPRALGHLVNLTYLSVGENNLSYLPEEIGTLESLE 500
Query: 133 SLYANNN-RITSLDGLLRGLTKLQVFNMD 160
+LY N+N ++ +L L T LQ+ +++
Sbjct: 501 TLYINDNPQLHNLPFELALCTNLQIMSIE 529
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 48 NNITHIHE--------NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
+N+TH+ E PP I + L + N+LTSL ++L L L L L +N
Sbjct: 100 HNLTHLVEFYLYSNKLTTLPPEIGCLVNLQTLGLSENSLTSLPDTLANLEKLRVLDLRHN 159
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L + + L+ L L + N++ + DI+ L +L N+I + LT
Sbjct: 160 KLCEIPDVVYKLTSLITLYLRFNRIRVVGEDIRNLKNLITLSLRGNKIRQPPAGIGELTG 219
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L + N + +E N L ++ LQ+N++ + S+ L L L L +N+LT
Sbjct: 220 LATLDAAHNHSEHL-SEEIGNCMCLQTLHLQHNELLDLPQSIGYLRNLTCLGLKYNRLT 277
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 8/207 (3%)
Query: 39 ALITLLLVNNNITHIHE---NAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
L TL +N+ H+ E N ++ LH+ N L L S+ L +L L L NRL
Sbjct: 219 GLATLDAAHNHSEHLSEEIGNCM--CLQTLHLQHNELLDLPQSIGYLRNLTCLGLKYNRL 276
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYAN-NNRITSLD-GLLRGLTK 153
++ L L +E NQ+ LP + S N S G T
Sbjct: 277 TAVPRSLSKCIHLDEFNVEGNQISQLPEGLLSSLSNLSSLTLSRNAFNSYPVGGPSQFTN 336
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
+ N++ NQ+ + F +L +++ N +TS+ + + L L N LT+
Sbjct: 337 VHSINLEHNQVDRIPYGIFSRARHLTKLNMNYNGLTSLPLDIGSWQNMVELNLGTNHLTK 396
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ DDI L+ L + LS N + K +
Sbjct: 397 -VPDDISCLQSLEVLILSNNNLRKIPS 422
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L + N L + + + LT L L+L NR++ + + L L L + N++
Sbjct: 151 LRVLDLRHNKLCEIPDVVYKLTSLITLYLRFNRIRVVGEDIRNLKNLITLSLRGNKIRQP 210
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ I + L +L A +N L + LQ ++ N++ + + L NL +
Sbjct: 211 PAGIGELTGLATLDAAHNHSEHLSEEIGNCMCLQTLHLQHNELLDLPQS-IGYLRNLTCL 269
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
L+ N++T++ SLS L + NQ+++
Sbjct: 270 GLKYNRLTAVPRSLSKCIHLDEFNVEGNQISQL 302
>gi|24215664|ref|NP_713145.1| hypothetical protein LA_2964 [Leptospira interrogans serovar Lai
str. 56601]
gi|386074856|ref|YP_005989174.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24196829|gb|AAN50163.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458646|gb|AER03191.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 426
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+T++ ++ L +L LYL +NQL FL
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLN-FL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNAL 363
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L + L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 397 KKLYLHNNPLPSEKIERIRKL 417
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
++G L LQ L + +NQL LP +I L L + N++T+L + L +LQ +
Sbjct: 274 EIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLG 333
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR 220
NQ+ + ++ + L NL+S+ L++NQ+ ++ + L KL L L +NQL L ++I+
Sbjct: 334 NNQLNFL-PNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLA-TLPEEIK 391
Query: 221 GLKRLRTVDLSYNKI 235
LK L+ + L N +
Sbjct: 392 QLKNLKKLYLHNNPL 406
>gi|410938477|ref|ZP_11370324.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410786402|gb|EKR75346.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 679
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 25/199 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N +T ++N R +++ L L +NRL SL+G +G KL+ L+I N+LE +
Sbjct: 439 LQNLNLSGNKITQISNLNREFSEIIELGLFDNRLTSLDG-IGRFPKLKELLIRGNELETI 497
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR------------ 169
+I L + A N+I+S + L + ++D NQ+T +
Sbjct: 498 SPEISSLKNLTRIDATRNKISSFPNIGSTLESVTDLSLDKNQLTQIPEALTQFPNLKSLG 557
Query: 170 -----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
D F+N L+++SL NN+I+ + S++ L L +YL +N+ + + +
Sbjct: 558 LSDNQLEEIPADLFENFQKLETLSLSNNRISDLPKSIAQLVSLKSIYLKNNRFVQ-IPEV 616
Query: 219 IRGLKRLRTVDLSYNKINK 237
++ LK+L+ V L+ N+I++
Sbjct: 617 LKELKKLKDVSLNENQISE 635
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 38 PALITLLLVNNNITHIH-ENAFPPTIRKLHVGFNNLTSLNN---SLRGLTDLNWLFLNNN 93
P L LL+ N + I E + + ++ N ++S N +L +TDL+ L+ N
Sbjct: 482 PKLKELLIRGNELETISPEISSLKNLTRIDATRNKISSFPNIGSTLESVTDLS---LDKN 538
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLRGLT 152
+L + L L+ L + NQLE +P+D+ + F +L +L +NNRI+ L + L
Sbjct: 539 QLTQIPEALTQFPNLKSLGLSDNQLEEIPADLFENFQKLETLSLSNNRISDLPKSIAQLV 598
Query: 153 KLQVF---NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L+ N F QI V ++ L L +SL NQI+ + LS +T L L + N
Sbjct: 599 SLKSIYLKNNRFVQIPEVLKE----LKKLKDVSLNENQISELPEFLSEMTALRELNIGKN 654
Query: 210 QLTE 213
+ +
Sbjct: 655 PVAQ 658
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG----- 146
+N+L L +L L LQ L + N++ + + + FS++ L +NR+TSLDG
Sbjct: 423 DNQLTELPDRLADLKYLQNLNLSGNKITQISNLNREFSEIIELGLFDNRLTSLDGIGRFP 482
Query: 147 -----LLRGLTKLQVFNMDFNQIT-MVRRDEFQN-----------LHNLDSISLQNNQIT 189
L+RG +L+ + + + + + R D +N L ++ +SL NQ+T
Sbjct: 483 KLKELLIRG-NELETISPEISSLKNLTRIDATRNKISSFPNIGSTLESVTDLSLDKNQLT 541
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ +L+ L L LS NQL E D ++L T+ LS N+I+
Sbjct: 542 QIPEALTQFPNLKSLGLSDNQLEEIPADLFENFQKLETLSLSNNRIS 588
>gi|444517329|gb|ELV11503.1| Biglycan [Tupaia chinensis]
Length = 405
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ HE AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKTHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLARVPAGLPDLKLLQVVYLHSNNITKVGVNDFCPVGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRL-KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ K+ E L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKTHEKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|341884210|gb|EGT40145.1| hypothetical protein CAEBREN_23247 [Caenorhabditis brenneri]
Length = 559
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
++L + +TS+ + ++ LT L LFL N+L L ++G L L+ L + +N L +LP
Sbjct: 76 QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ L +L +N++T + ++ +T L+ + +N+I V ++ NL L +
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPPVIYKITSLETLWLRYNRIVAV-DEQIGNLVKLKMLD 194
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++ N+I + S++ LT L +S+N LT + ++I + L +DL +N +++
Sbjct: 195 VRENKIRELPSAIGKLTSLVVCLVSYNHLTR-VPEEIGECQSLTQLDLQHNDLSEL 249
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 28/202 (13%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LTSL +SL L L L L +N+L + + ++ L+ L + N++ A+
Sbjct: 121 LKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPPVIYKITSLETLWLRYNRIVAV 180
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLD 179
I +L L N+I L + LT L V + +N +T V + E Q+L LD
Sbjct: 181 DEQIGNLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLD 240
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHN-------------QLTEFLLDD-------- 218
LQ+N ++ + S+ LT L + + +N QL EF+++
Sbjct: 241 ---LQHNDLSELPYSIGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPP 297
Query: 219 --IRGLKRLRTVDLSYNKINKF 238
+ L ++ TV+LS N++ F
Sbjct: 298 NLLTMLPKIHTVNLSRNELTAF 319
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+I +L++ N L L + L +L L L+NN+LK L Q+G L KL+ L +E+N+LE
Sbjct: 376 SITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELET 435
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I L L+ +N+I SL + L LQ + N +T + +E +L +L S
Sbjct: 436 VPTEIGFLQHLTKLWVQSNKIVSLPRSIGNLCSLQDLRLGENNLTAI-PEEIGHLDSLKS 494
Query: 181 ISLQNN 186
+ L +N
Sbjct: 495 LYLNDN 500
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 111/243 (45%), Gaps = 29/243 (11%)
Query: 10 GHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVG 68
G+ V L ++D+ E L S K T +L+ L+ N++T + E ++ +L +
Sbjct: 185 GNLVKLKMLDVR-ENKIRELPSAIGKLT-SLVVCLVSYNHLTRVPEEIGECQSLTQLDLQ 242
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI-QL 127
N+L+ L S+ LT L + + N+++ + +L +L+ ++E N L+ LP ++ +
Sbjct: 243 HNDLSELPYSIGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTM 302
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
++ ++ + N +T+ G + NM+ NQI+ + F L ++L+ N
Sbjct: 303 LPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKEN 362
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL-----------------------K 223
++ S+ + T + L LS NQL + L +DI L K
Sbjct: 363 ELVSLPLDMGSWTSITELNLSTNQL-KVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLK 421
Query: 224 RLR 226
+LR
Sbjct: 422 KLR 424
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L L N L SL +G+ + + L + NQL+ LP DI+ L L +NN++
Sbjct: 352 TRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLK 411
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L + L KL+ +++ N++ V E L +L + +Q+N+I S+ S+ L L
Sbjct: 412 KLPNQIGNLKKLRELDLEENELETV-PTEIGFLQHLTKLWVQSNKIVSLPRSIGNLCSLQ 470
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L L N LT + ++I L L+++ L+ N
Sbjct: 471 DLRLGENNLTA-IPEEIGHLDSLKSLYLNDN 500
>gi|124002831|ref|ZP_01687683.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123992059|gb|EAY31446.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 300
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Query: 55 ENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIE 114
E A+ +++L + +L L + T L L L+NNRL +L +G L++L+ L ++
Sbjct: 58 EEAYCYHLKELDLSNQHLEVLPPEITRFTHLEVLDLSNNRLSALPTDIGQLARLEYLCVD 117
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
N L LP++I +L LY + N + + + L +LQ+ ++ NQ++ + +
Sbjct: 118 ANYLTTLPAEIGQLIRLKGLYLSENHLQVIPDAIGCLEQLQIMKLNTNQLSKL-PECIGG 176
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L L + L++NQ+T ++ +L LT L L +SHN L F + + L L ++L+ N
Sbjct: 177 LSGLVELHLKDNQLTYLSPTLRQLTTLETLDVSHNYLNTF-TEAMTALTSLVKLNLAKNN 235
Query: 235 I 235
I
Sbjct: 236 I 236
>gi|418701961|ref|ZP_13262879.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759093|gb|EKR25312.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 267
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L+ N+L SL ++G L L++L + NQ +LP +I
Sbjct: 1 MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L N N++ SL + L KL+V N+ NQ T + + E L NL+ + L N
Sbjct: 61 QLQNLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPK-EIGQLQNLERLDLAGN 119
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
Q TS+ + L KL L L HN+ T F +IR + L+ + LS +++
Sbjct: 120 QFTSLPKEIGQLQKLEALNLDHNRFTIF-PKEIRQQQSLKWLRLSGDQL 167
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N TSL + L +L L LN N+L SL ++G L KL++L + NQ +L
Sbjct: 42 LRVLNLAGNQFTSLPKEIGQLQNLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSL 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+ TSL + L KL+ N+D N+ T+ + E + +L +
Sbjct: 102 PKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPK-EIRQQQSLKWL 160
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +Q+ ++ + L L L+L NQLT L +I L+ L ++L NK+
Sbjct: 161 RLSGDQLKTLPKEILLLQNLQSLHLDGNQLTS-LPKEIGQLQNLFELNLQDNKL 213
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N T +R L WL L+ ++LK+L ++ L LQ L ++ NQL +L
Sbjct: 134 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSL 193
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L +N++ +L + L LQV + N ++ + + Q L
Sbjct: 194 PKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQEL 247
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N TSL + L L L L++NR ++ L+ L + +QL+ L
Sbjct: 111 LERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTL 170
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L SL+ + N++TSL + L L N+ N++ + + E + L NL +
Sbjct: 171 PKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPK-EIEQLQNLQVL 229
Query: 182 SLQNN 186
L +N
Sbjct: 230 RLYSN 234
>gi|421092581|ref|ZP_15553316.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410364610|gb|EKP15628.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|456888014|gb|EMF99018.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 181
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N LT L N + L +L L L NN+L +L ++G L L+ L + NQL L
Sbjct: 1 MQELHLDGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTL 60
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L LY N N+IT L + L++L+ N+ N++T + +E L L S+
Sbjct: 61 PEEIGRLKNLQKLYLNENQITILPNEVGNLSELEELNLSGNRLTTL-PNEIGQLQKLRSL 119
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L NNQ+T++ + L L L L N + + IR L
Sbjct: 120 DLSNNQLTTLPKEIGHLKNLRRLVLKGNNFSPQEKERIRNL 160
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 79/131 (60%), Gaps = 8/131 (6%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQI 164
+Q L ++ NQL LP++I L SL NN++T+L G L+ L L+++N NQ+
Sbjct: 1 MQELHLDGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYN---NQL 57
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
T + +E L NL + L NQIT + + + L++L L LS N+LT L ++I L++
Sbjct: 58 TTLP-EEIGRLKNLQKLYLNENQITILPNEVGNLSELEELNLSGNRLT-TLPNEIGQLQK 115
Query: 225 LRTVDLSYNKI 235
LR++DLS N++
Sbjct: 116 LRSLDLSNNQL 126
>gi|418691224|ref|ZP_13252327.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400359628|gb|EJP15613.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 267
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L+ N+L SL ++G L KL++L + NQ +LP +I
Sbjct: 1 MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L + N+ TSL + L L+V N+ NQ+T + + E L NL+ + L N
Sbjct: 61 QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPK-EIGQLQNLERLDLAGN 119
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
Q TS+ + L KL L L HN+ T F +IR + L+ + LS +++
Sbjct: 120 QFTSLPKEIGQLQKLEALNLDHNRFTIF-PKEIRQQQSLKWLRLSGDQL 167
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N TSL + L +L L L+ N+ SL ++G L L++L + NQL +L
Sbjct: 42 LRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSL 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+ TSL + L KL+ N+D N+ T+ + E + +L +
Sbjct: 102 PKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPK-EIRQQQSLKWL 160
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +Q+ ++ + L L L+L NQLT L +I L+ L ++L NK+
Sbjct: 161 RLSGDQLKTLPKEILLLQNLQSLHLDSNQLTS-LPKEIGQLQNLFELNLQDNKL 213
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N T +R L WL L+ ++LK+L ++ L LQ L ++ NQL +L
Sbjct: 134 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSL 193
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L +N++ +L + L LQV + N ++ + + Q L
Sbjct: 194 PKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLKEKQKIQEL 247
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 24/148 (16%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN----- 116
+R L++ N LTSL + L +L L L N+ SL ++G L KL+ L ++ N
Sbjct: 88 LRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIF 147
Query: 117 ------------------QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
QL+ LP +I L L SL+ ++N++TSL + L L N
Sbjct: 148 PKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELN 207
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNN 186
+ N++ + + E L NL + L +N
Sbjct: 208 LQDNKLKTLPK-EIGQLQNLQVLRLYSN 234
>gi|298709274|emb|CBJ31212.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
Length = 557
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSLE-GQLGTLS 106
++ +N ++ + +G N+ TSL L G ++ L L N L +L G L+
Sbjct: 69 DLVECFDNVGRASVTAIWLGSNSFTSLAAGLFDGFDNIKSLSLGN-LLTTLPLGLFDGLA 127
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSL---YANNNRITSLD-GLLRGLTKLQVFNMDFN 162
L L + NQ +LP+ + F L SL + +N +TSL GL GL L+V N
Sbjct: 128 SLSYLYLGGNQFTSLPAGV--FDGLESLLKIFLQDNPLTSLPAGLFNGLDALEVIYQPDN 185
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRG 221
Q+T + F +L +L ISLQNNQ+ S+ + L GL +L YL L NQL G
Sbjct: 186 QLTSLPAGIFGDLKSLQGISLQNNQLASLPAGLFDGLDELQYLALYSNQLASLPAGLFDG 245
Query: 222 LKRLRTVDLSYNKINK 237
L L T+ L+ N++
Sbjct: 246 LGALETLSLNVNQLTS 261
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Query: 61 TIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++ L++G N TSL + GL L +FL +N L SL G L L+++ NQL
Sbjct: 128 SLSYLYLGGNQFTSLPAGVFDGLESLLKIFLQDNPLTSLPAGLFNGLDALEVIYQPDNQL 187
Query: 119 EALPSDIQLFSQLGSLYA---NNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
+LP+ I F L SL NN++ SL GL GL +LQ + NQ+ + F
Sbjct: 188 TSLPAGI--FGDLKSLQGISLQNNQLASLPAGLFDGLDELQYLALYSNQLASLPAGLFDG 245
Query: 175 LHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L L+++SL NQ+TS+ + + L L L L NQL GL L+ + L +N
Sbjct: 246 LGALETLSLNVNQLTSLPAGIFEDLDALENLNLGVNQLASLPAGLFDGLHALQYLSLRWN 305
Query: 234 K 234
Sbjct: 306 D 306
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGF---NNLTSLNNSLRG-LTDLNWLF 89
G +L+ + L +N +T + F + L V + N LTSL + G L L +
Sbjct: 147 FDGLESLLKIFLQDNPLTSLPAGLFN-GLDALEVIYQPDNQLTSLPAGIFGDLKSLQGIS 205
Query: 90 LNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA---NNNRITSLD 145
L NN+L SL G L +LQ L + NQL +LP+ LF LG+L N N++TSL
Sbjct: 206 LQNNQLASLPAGLFDGLDELQYLALYSNQLASLPA--GLFDGLGALETLSLNVNQLTSLP 263
Query: 146 -GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
G+ L L+ N+ NQ+ + F LH L +SL+ N SL GL
Sbjct: 264 AGIFEDLDALENLNLGVNQLASLPAGLFDGLHALQYLSLRWNDGLQCLPSLFGL 317
>gi|260800174|ref|XP_002595010.1| hypothetical protein BRAFLDRAFT_137659 [Branchiostoma floridae]
gi|229280249|gb|EEN51021.1| hypothetical protein BRAFLDRAFT_137659 [Branchiostoma floridae]
Length = 330
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 114/199 (57%), Gaps = 14/199 (7%)
Query: 47 NNNITHIHENAFPPTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLE-GQLGT 104
N +T I +N P +I +L + N +T + + ++ L+ L + L+++++ ++ G
Sbjct: 13 NLGLTSIPQN-LPTSIYRLDLSDNQITIIQSGAIANLSQLTHMDLSSSQITEIQPGAFVN 71
Query: 105 LSKLQLLVIEQNQLEALPS----DIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQ--VF 157
L +L++ ++ N++ + + D+ L L L+ + N IT++ G L +L+ V
Sbjct: 72 LPQLKVFSLQSNKIRMIQAGTFVDLPL---LEELWLDTNLITTIQPGAFANLPQLRKLVI 128
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLL 216
N ++NQ+TM++ F NL L + L N+IT + + ++S LT+L LYLS+NQ+T+ +
Sbjct: 129 NNNYNQVTMIQPGAFVNLPQLQGLYLYRNKITMIQAGTVSNLTRLQELYLSYNQMTKIQV 188
Query: 217 DDIRGLKRLRTVDLSYNKI 235
I L +LR + LS+NKI
Sbjct: 189 GTIGYLPQLRELSLSFNKI 207
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVG--FNNLTSLN-NSLRGLTDLNWLFLNN 92
P L L L N IT I AF P +RKL + +N +T + + L L L+L
Sbjct: 97 PLLEELWLDTNLITTIQPGAFANLPQLRKLVINNNYNQVTMIQPGAFVNLPQLQGLYLYR 156
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD-GLLRGL 151
N++ ++ GT+S L ++L LY + N++T + G + L
Sbjct: 157 NKITMIQA--GTVSNL--------------------TRLQELYLSYNQMTKIQVGTIGYL 194
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL--SGLT-KLAYLYLSH 208
+L+ ++ FN+ITM++ F +L L + L NN IT + + S L +L L L
Sbjct: 195 PQLRELSLSFNKITMIKSGAFADLPRLQKLFLSNNHITKIQVCIPPSALAPQLQRLRLKS 254
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
N+ T L RL+ +DL N I+
Sbjct: 255 NE-TMIQSHTFASLSRLQYLDLCSNHIH 281
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQL-EALPSDIQLFS 129
LTS+ +L T + L L++N++ ++ G + LS+L + + +Q+ E P
Sbjct: 16 LTSIPQNLP--TSIYRLDLSDNQITIIQSGAIANLSQLTHMDLSSSQITEIQPGAFVNLP 73
Query: 130 QLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN-- 186
QL +N+I + G L L+ +D N IT ++ F NL L + + NN
Sbjct: 74 QLKVFSLQSNKIRMIQAGTFVDLPLLEELWLDTNLITTIQPGAFANLPQLRKLVINNNYN 133
Query: 187 QITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
Q+T + + L +L LYL N++T + L RL+ + LSYN++ K G
Sbjct: 134 QVTMIQPGAFVNLPQLQGLYLYRNKITMIQAGTVSNLTRLQELYLSYNQMTKIQVGTIG 192
>gi|32351287|gb|AAP74960.1| Nogo-66 receptor homolog 2 [Rattus norvegicus]
Length = 438
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 37 TPALITLLLVNNNITHIHENAFPPTI--RKLHVGFNN--LTSLNNSLRGLTDLNWLFLNN 92
+PA++TL + +NNIT I N F + +L +G N T + +GL L+ L+L
Sbjct: 68 SPAMVTLWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYK 127
Query: 93 NRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLR 149
L SL G G L LQ L ++ N +E L DI + L L+ + N++ SL G+ R
Sbjct: 128 CGLSSLPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFR 187
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GL L + NQ+ V F +LH L ++ L NN +T + L+ L L +L L+
Sbjct: 188 GLVNLDRLLLHENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLAPLVALEFLRLNG 247
Query: 209 N 209
N
Sbjct: 248 N 248
>gi|31077122|ref|NP_852042.1| reticulon-4 receptor-like 1 precursor [Rattus norvegicus]
gi|81912840|sp|Q80WD0.1|R4RL1_RAT RecName: Full=Reticulon-4 receptor-like 1; AltName: Full=Nogo
receptor-like 2; AltName: Full=Nogo-66 receptor homolog
2; AltName: Full=Nogo-66 receptor-related protein 3;
Short=NgR3; Flags: Precursor
gi|30141054|gb|AAP21838.1| Nogo-66 receptor homolog-2 [Rattus norvegicus]
gi|120538585|gb|AAI29085.1| Reticulon 4 receptor-like 1 [Rattus norvegicus]
gi|149053386|gb|EDM05203.1| reticulon 4 receptor-like 1 [Rattus norvegicus]
Length = 445
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 37 TPALITLLLVNNNITHIHENAFPPTI--RKLHVGFNN--LTSLNNSLRGLTDLNWLFLNN 92
+PA++TL + +NNIT I N F + +L +G N T + +GL L+ L+L
Sbjct: 75 SPAMVTLWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYK 134
Query: 93 NRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLR 149
L SL G G L LQ L ++ N +E L DI + L L+ + N++ SL G+ R
Sbjct: 135 CGLSSLPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFR 194
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GL L + NQ+ V F +LH L ++ L NN +T + L+ L L +L L+
Sbjct: 195 GLVNLDRLLLHENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLAPLVALEFLRLNG 254
Query: 209 N 209
N
Sbjct: 255 N 255
>gi|255089471|ref|XP_002506657.1| predicted protein [Micromonas sp. RCC299]
gi|226521930|gb|ACO67915.1| predicted protein [Micromonas sp. RCC299]
Length = 205
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R L++ N LTS+ + LT L L+LNNN+L S+ ++G L+ L+ L + N+L +
Sbjct: 29 ALRDLNLQHNELTSVPAEIGQLTSLTSLWLNNNQLTSVPAEIGQLTSLEGLYLWDNKLTS 88
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L N++TS+ + LT L+ + NQ+T + E L +L +
Sbjct: 89 VPTEIGQLTSLTDLSLGGNQLTSVPAEIGQLTSLRELELYDNQLTSLPA-EIGQLTSLTA 147
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L +N++T + + + L L L L HN+LT
Sbjct: 148 LFLDDNRLTRVPAEIGQLASLVGLDLQHNKLT 179
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 5/160 (3%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L L DLN L +N L S+ ++G L+ L L + NQL ++P++I + L LY +
Sbjct: 27 LTALRDLN---LQHNELTSVPAEIGQLTSLTSLWLNNNQLTSVPAEIGQLTSLEGLYLWD 83
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
N++TS+ + LT L ++ NQ+T V E L +L + L +NQ+TS+ + + L
Sbjct: 84 NKLTSVPTEIGQLTSLTDLSLGGNQLTSVPA-EIGQLTSLRELELYDNQLTSLPAEIGQL 142
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
T L L+L N+LT + +I L L +DL +NK+
Sbjct: 143 TSLTALFLDDNRLTR-VPAEIGQLASLVGLDLQHNKLTSV 181
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LTS+ + LT L L+L +N+L S+ ++G L+ L L + NQL ++P++I +
Sbjct: 61 NQLTSVPAEIGQLTSLEGLYLWDNKLTSVPTEIGQLTSLTDLSLGGNQLTSVPAEIGQLT 120
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L +N++TSL + LT L +D N++T V E L +L + LQ+N++T
Sbjct: 121 SLRELELYDNQLTSLPAEIGQLTSLTALFLDDNRLTRVPA-EIGQLASLVGLDLQHNKLT 179
Query: 190 SMNSSLSGL 198
S+ + ++ L
Sbjct: 180 SVPAEIAQL 188
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 83/150 (55%), Gaps = 2/150 (1%)
Query: 89 FLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLL 148
F + + ++ ++G L+ L+ L ++ N+L ++P++I + L SL+ NNN++TS+ +
Sbjct: 11 FEDCDLTGAVPAEVGRLTALRDLNLQHNELTSVPAEIGQLTSLTSLWLNNNQLTSVPAEI 70
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
LT L+ + N++T V E L +L +SL NQ+TS+ + + LT L L L
Sbjct: 71 GQLTSLEGLYLWDNKLTSVPT-EIGQLTSLTDLSLGGNQLTSVPAEIGQLTSLRELELYD 129
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQLT L +I L L + L N++ +
Sbjct: 130 NQLTS-LPAEIGQLTSLTALFLDDNRLTRV 158
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Query: 39 ALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L +L L NN +T + E ++ L++ N LTS+ + LT L L L N+L S
Sbjct: 52 SLTSLWLNNNQLTSVPAEIGQLTSLEGLYLWDNKLTSVPTEIGQLTSLTDLSLGGNQLTS 111
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
+ ++G L+ L+ L + NQL +LP++I + L +L+ ++NR+T + + L L
Sbjct: 112 VPAEIGQLTSLRELELYDNQLTSLPAEIGQLTSLTALFLDDNRLTRVPAEIGQLASLVGL 171
Query: 158 NMDFNQITMVRRDEFQ 173
++ N++T V + Q
Sbjct: 172 DLQHNKLTSVPAEIAQ 187
>gi|441648556|ref|XP_004093063.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Nomascus
leucogenys]
Length = 1582
Score = 70.5 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 3/204 (1%)
Query: 33 DLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
D+ L+TL L N + + + +F + +L +G N+L L ++L L +L L+L+
Sbjct: 182 DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLD 241
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N+L +L +LG L +L L + +N+LE LP+++ L L + N + L + L
Sbjct: 242 RNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQL 301
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+L + +D N++ V + + NL + L N + ++ SL LTKL L + N L
Sbjct: 302 KQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHL 360
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
E L +I G L + L N++
Sbjct: 361 -EALPPEIGGCVALSVLSLRDNRL 383
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 120 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 179
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 180 PRDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 239
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 240 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 297
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 298 IGQLKQLSILKVDQNRL 314
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 307 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 366
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L +L V ++ N++ + F H NL ++ L
Sbjct: 367 IGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 423
Query: 184 QNNQITSM 191
NQ M
Sbjct: 424 AENQAQPM 431
>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
Length = 379
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+LH+ N LT+L N + L L L L N+LK+L ++G L +LQ+L + NQL L
Sbjct: 136 LRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTL 195
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ N++ +L + L LQV ++ NQ+ + + E L NL +
Sbjct: 196 PKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPK-EIGELQNLQEL 254
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+ ++ + L L L L N+L + L +I L+ L +DL N++
Sbjct: 255 YLYTNQLKTLPKEIGELQNLTVLDLHINEL-KTLPKEIGELQNLTVLDLRNNEL 307
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ FN LT+ N + L +L L L+ N+L +L +G L KL+ L + +NQL+ L
Sbjct: 113 LQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTL 172
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+I +L L N N++T+L + L L+ ++ NQ+ + D L NL +
Sbjct: 173 SKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPND-IGELKNLQVL 231
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ +NQ+ ++ + L L LYL NQL + L +I L+ L +DL N++
Sbjct: 232 HIGSNQLKTLPKEIGELQNLQELYLYTNQL-KTLPKEIGELQNLTVLDLHINEL 284
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT+L + L +L L L N+LK+L +G L LQ+L I NQL+ LP +I
Sbjct: 190 NQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQ 249
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L LY N++ +L + L L V ++ N++ + + E L NL + L+NN++
Sbjct: 250 NLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPK-EIGELQNLTVLDLRNNELK 308
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
++ + L L L L +N+L + L ++I LK LR + L
Sbjct: 309 TLPKEIGELQSLTVLDLRNNEL-KTLPNEIGKLKELRKLHL 348
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 4/187 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
N+T +N P +R L + LT+L + L +L L L N+L +L ++G L L
Sbjct: 33 NLTEALQN--PTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNL 90
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
QLL +++NQ ALP+DI L L+ + N++T+ + L L+ ++ NQ+T +
Sbjct: 91 QLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLP 150
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D L L+ +SL NQ+ +++ + L +L L L+ NQLT L +I LK LR +
Sbjct: 151 ND-IGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLT-TLPKEIGELKNLREL 208
Query: 229 DLSYNKI 235
L N++
Sbjct: 209 HLYKNQL 215
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N L +L + L +L L L+ N LK+L ++G L L +L + N+L+ L
Sbjct: 251 LQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTL 310
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
P +I L L NN + +L + L +L+ ++D
Sbjct: 311 PKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHLD 349
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+ LH+ N L +L + L +L L L NN LK+L ++G L L +L + N+L+
Sbjct: 275 TVLDLHI--NELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKT 332
Query: 121 LPSDIQLFSQLGSLYANN 138
LP++I +L L+ ++
Sbjct: 333 LPNEIGKLKELRKLHLDD 350
>gi|124003701|ref|ZP_01688549.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123990756|gb|EAY30223.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 214
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 97/160 (60%), Gaps = 2/160 (1%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
LR L L L+ +++++ +G L KLQ LV+ NQ+ +LP+++ ++L L ++
Sbjct: 42 LRSLEKFEQLDLSALKIETIPLHIGELFKLQELVLSNNQITSLPNEMAYLNRLRVLRVDD 101
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGL 198
N++T L G + +L ++ NQ+ + + E +L L++++L N ITS+ +S+ L
Sbjct: 102 NQLTQLPGFVGRWQQLTKLSLVMNQLHTLPK-EIGSLPQLNTLALSYNHITSLPTSIRHL 160
Query: 199 TKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+KL YL L++N + ++L +++ L+ L T++LS +++K
Sbjct: 161 SKLRYLILANNPI-QYLPEELALLQNLHTLNLSGTQVSKV 199
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N +TSL N + L L L +++N+L L G +G +L L + NQL LP +I
Sbjct: 79 NQITSLPNEMAYLNRLRVLRVDDNQLTQLPGFVGRWQQLTKLSLVMNQLHTLPKEIGSLP 138
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
QL +L + N ITSL +R L+KL+ + N I + +E L NL +++L Q++
Sbjct: 139 QLNTLALSYNHITSLPTSIRHLSKLRYLILANNPIQYL-PEELALLQNLHTLNLSGTQVS 197
Query: 190 SM 191
+
Sbjct: 198 KV 199
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 43 LLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
L+L NN IT + +E A+ +R L V N LT L + L L L N+L +L +
Sbjct: 74 LVLSNNQITSLPNEMAYLNRLRVLRVDDNQLTQLPGFVGRWQQLTKLSLVMNQLHTLPKE 133
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G+L +L L + N + +LP+ I+ S+L L NN I L L L L N+
Sbjct: 134 IGSLPQLNTLALSYNHITSLPTSIRHLSKLRYLILANNPIQYLPEELALLQNLHTLNLSG 193
Query: 162 NQITMVRRDEFQNL 175
Q++ V ++ ++ L
Sbjct: 194 TQVSKVEKNRWKKL 207
>gi|421090274|ref|ZP_15551069.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000955|gb|EKO51580.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 313
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L N+L SL ++G L KL++L + NQL +LP +++
Sbjct: 52 MGLHELDSLPRVIGLFQNLEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLTSLPKEME 111
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L L ++N TS R L KL++ N+ NQ+T + + E + L NL+ + L N
Sbjct: 112 LLQNLEILNLDDNEFTSFPKETRQLQKLRILNLAGNQLTSLPK-EMELLQNLERLDLAGN 170
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + + L L L L HNQ T F +IR + L+ + LS N++
Sbjct: 171 RFKILPKEMELLQNLEALNLGHNQFTSF-PKEIRRQQNLKWLYLSRNQL 218
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 45 LVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
LV N +T + E +R L++ N LTSL + L +L L L++N S +
Sbjct: 75 LVGNQLTSLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFTSFPKETR 134
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L KL++L + NQL +LP +++L L L NR L + L L+ N+ NQ
Sbjct: 135 QLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKILPKEMELLQNLEALNLGHNQ 194
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
T + E + NL + L NQ+ +++ + L L L+L NQL+ + +I L+
Sbjct: 195 FTSFPK-EIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSS-IPKEIGQLQ 252
Query: 224 RLRTVDLSYNKI 235
L ++L NK+
Sbjct: 253 NLFELNLQNNKL 264
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ KL++ N LTSL + L L L L +N+L SL ++ L L++L ++ N+ +
Sbjct: 70 LEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFTSF 129
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P + + +L L N++TSL + L L+ ++ N+ ++ + E + L NL+++
Sbjct: 130 PKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKILPK-EMELLQNLEAL 188
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+L +NQ TS + L +LYLS NQL + L +I L+ L+++ L N+++
Sbjct: 189 NLGHNQFTSFPKEIRRQQNLKWLYLSRNQL-KTLSKEIVELQNLQSLHLDGNQLS 242
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++G N TS +R +L WL+L+ N+LK+L ++ L LQ L ++ NQL ++
Sbjct: 185 LEALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSI 244
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L NN++ +L + L LQV + N + + E Q L
Sbjct: 245 PKEIGQLQNLFELNLQNNKLKTLPKEIGLLQNLQVLRLYSNPFSFKEKQEIQKL 298
>gi|418668095|ref|ZP_13229499.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756128|gb|EKR17754.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 427
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ N L +L + L +L L L N+L ++ ++G L LQ L + NQL L
Sbjct: 97 LQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATL 156
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P DI+ +L +LY +N+ S+ + L L+ +D NQ+ ++ + E L NL+S+
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK-EIGQLRNLESL 215
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
L +NQ+ + + L L L+L +NQLT
Sbjct: 216 GLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++G N S+ + L +L L L++N+L L ++G L L+ L ++ NQL L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225
Query: 122 PSDIQLFSQLGSLYANNNRITSLD--------------------------GLLRGLTKLQ 155
P +I L L+ NN++T+L G L+ L KL+
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLK 285
Query: 156 VFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
++ NQ+T + + E L NL + L NQ+ ++ ++ L +L LYL +NQL L
Sbjct: 286 LYE---NQLTTLPK-EIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLN-VL 340
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
+ + L+ L ++DL +N++N
Sbjct: 341 PNKLEQLQNLESLDLEHNQLNAL 363
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L L L N+L +L ++G L LQ L ++ NQL LP +I +L +LY NN++
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337
Query: 142 TSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKL 201
L L L L+ +++ NQ+ + + E L L +++L+ NQ+ ++ + L L
Sbjct: 338 NVLPNKLEQLQNLESLDLEHNQLNALPK-EIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396
Query: 202 AYLYLSHNQLTEFLLDDIRGL 222
LYL +N L ++ IR L
Sbjct: 397 KKLYLHNNPLPSEKIERIRKL 417
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL 108
NIT + +N P +R L++ + LT+L + L +L L L++N+L +L ++G L L
Sbjct: 40 NITEVLKN--PQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNL 97
Query: 109 QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR 168
Q L + +NQL ALP +I L L N++T++ + L LQ N+ NQ+ +
Sbjct: 98 QQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLP 157
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
D + L L ++ L +NQ S+ + L L L L HNQL L +I L+ L ++
Sbjct: 158 ED-IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLN-VLPKEIGQLRNLESL 215
Query: 229 DLSYNKIN 236
L +N++N
Sbjct: 216 GLDHNQLN 223
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++KL + N LT+L + L +L L L+ N+L +L +G L +LQ L + NQL L
Sbjct: 281 LQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVL 340
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+ ++ L SL +N++ +L + L KLQ N+ +NQ+ + +E + L NL +
Sbjct: 341 PNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATL-PEEIKQLKNLKKL 399
Query: 182 SLQNNQITS 190
L NN + S
Sbjct: 400 YLHNNPLPS 408
>gi|424842302|ref|ZP_18266927.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
gi|395320500|gb|EJF53421.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
Length = 600
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+ L G AL L + +N + + E + + L N L L + +L L +
Sbjct: 204 ETLSGASALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELPPQIGSSRNLLKLCV 263
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 150
+N+L+ L +G L KL+LL +E NQL+ LP + L LY ++N++T L
Sbjct: 264 EHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTVLPINFGE 323
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
LT L+ ++ NQ+T + N L + L NN +TS+ S+ L +L LY++ NQ
Sbjct: 324 LTALENLYLNDNQLTSLPSG-IGNCKELRELFLNNNAMTSLPDSMGSLYQLEELYMNDNQ 382
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
+ L GLK L+ + L+ NKIN+
Sbjct: 383 IAN-LPSSFGGLKNLKLLYLTNNKINRLS 410
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+RKL++ N LT L + LT L L+LN+N+L SL +G +L+ L + N + +
Sbjct: 303 ALRKLYLDSNQLTVLPINFGELTALENLYLNDNQLTSLPSGIGNCKELRELFLNNNAMTS 362
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD-EFQNLHNLD 179
LP + QL LY N+N+I +L GL L++ + N+I + +D + L
Sbjct: 363 LPDSMGSLYQLEELYMNDNQIANLPSSFGGLKNLKLLYLTNNKINRLSKDLDCSGWKRLS 422
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+I L+NN + +L +L LYL N ++E I + ++ + L+ N++++
Sbjct: 423 AIYLENNAFQKLPKALETAPQLQTLYLDGNLISEVNDSTIIKMPKIEHISLNDNQLSEL 481
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L + N +TSL +S+ L L L++N+N++ +L G L L+LL + N++ L
Sbjct: 350 LRELFLNNNAMTSLPDSMGSLYQLEELYMNDNQIANLPSSFGGLKNLKLLYLTNNKINRL 409
Query: 122 PSDIQL--FSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
D+ + +L ++Y NN L L +LQ +D N I+ V + ++
Sbjct: 410 SKDLDCSGWKRLSAIYLENNAFQKLPKALETAPQLQTLYLDGNLISEVNDSTIIKMPKIE 469
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
ISL +NQ++ + ++ G + +L L N + + L + IR K L +DL+ NKI +
Sbjct: 470 HISLNDNQLSELPDNM-GSWPIRHLALERNGIMD-LPESIRYFKNLELLDLAGNKITQ 525
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D ++ L L L NN + + + F P + +L + N L L ++GL +L L++
Sbjct: 89 DSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYLPEKIKGLRNLRRLYI 148
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 150
+ N L+ L L + KL + E NQL+++P + +L SL + N++ L L G
Sbjct: 149 DGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLSG 208
Query: 151 LTKLQVFNMDFNQIT---------------MVRRDEFQNL-------HNLDSISLQNNQI 188
+ L+V +D N++ ++ Q L NL + +++NQ+
Sbjct: 209 ASALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELPPQIGSSRNLLKLCVEHNQL 268
Query: 189 TSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ S+ L KL L L HNQL + L + LK LR + L N++
Sbjct: 269 QRLPESIGQLQKLELLRLEHNQLKQ-LPKNFGQLKALRKLYLDSNQL 314
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + ++L SL +S+R L +L L NN LK L L L L+ L + NQL+ L
Sbjct: 74 VHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYL 133
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR------------- 168
P I+ L LY + N + L L + KL + NQ+ +
Sbjct: 134 PEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLL 193
Query: 169 --RDEFQNLHN-------LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+++ Q L L+ +++ +N++ + +L L KL +L+ +HNQL E
Sbjct: 194 LDKNQLQYLPETLSGASALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQEL 248
>gi|421110758|ref|ZP_15571249.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803855|gb|EKS09982.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 206
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R LH+ L +L + L +L L L +N+L +L ++G L L+ L + NQ
Sbjct: 36 PTQVRVLHLNGKKLIALPKEIGQLQNLQGLNLWDNQLTTLPKEIGNLQHLKRLFLGLNQF 95
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
ALP +I L LY N N++T+L + L LQ ++ NQ+T + E NL NL
Sbjct: 96 TALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTAL-PIEIGNLQNL 154
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+ L NQ+T++ + L KL LYL N
Sbjct: 155 KKLVLNRNQLTTLPEEIGKLQKLQDLYLGSN 185
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
+ LN +L+ T + L LN +L +L ++G L LQ L + NQL LP +I L
Sbjct: 27 SKLNEALQNPTQVRVLHLNGKKLIALPKEIGQLQNLQGLNLWDNQLTTLPKEIGNLQHLK 86
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ N+ T+L + L LQ ++ NQ+T + + E NL NL + L NQ+T++
Sbjct: 87 RLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPK-EIGNLQNLQELYLNENQLTALP 145
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L L L L+ NQLT L ++I L++L+ + L N
Sbjct: 146 IEIGNLQNLKKLVLNRNQLTT-LPEEIGKLQKLQDLYLGSN 185
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L +G N T+L + L +L L+LN N+L +L ++G L LQ L + +NQL AL
Sbjct: 85 LKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTAL 144
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L N N++T+L + L KLQ + N + R+++ Q L
Sbjct: 145 PIEIGNLQNLKKLVLNRNQLTTLPEEIGKLQKLQDLYLGSNPSLIDRKEKIQKL 198
>gi|418726059|ref|ZP_13284671.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409960840|gb|EKO24593.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 267
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L+ N+L SL ++G L KL++L + NQ +LP +I
Sbjct: 1 MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L + N+ TSL + L L+V N+ NQ+T + + E L NL+ + L N
Sbjct: 61 QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPK-EIGQLQNLERLDLAGN 119
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
Q TS+ + L KL L L HN+ T F +IR + L+ + LS +++
Sbjct: 120 QFTSLPKEIGQLQKLEALNLDHNRFTIF-PKEIRQQQSLKWLRLSGDQL 167
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N TSL + L +L L L+ N+ SL ++G L L++L + NQL +L
Sbjct: 42 LRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSL 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+ TSL + L KL+ N+D N+ T+ + E + +L +
Sbjct: 102 PKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPK-EIRQQQSLKWL 160
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +Q+ ++ + L L L+L NQLT L +I L+ L ++L NK+
Sbjct: 161 RLSGDQLKTLPKEILLLQNLQSLHLDSNQLTS-LPKEIGQLQNLFELNLQDNKL 213
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N T +R L WL L+ ++LK+L ++ L LQ L ++ NQL +L
Sbjct: 134 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSL 193
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L +N++ +L + L LQV + N ++ + + Q L
Sbjct: 194 PKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQEL 247
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 24/148 (16%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN----- 116
+R L++ N LTSL + L +L L L N+ SL ++G L KL+ L ++ N
Sbjct: 88 LRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIF 147
Query: 117 ------------------QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
QL+ LP +I L L SL+ ++N++TSL + L L N
Sbjct: 148 PKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELN 207
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNN 186
+ N++ + + E + L NL + L +N
Sbjct: 208 LQDNKLKTLPK-EIEQLQNLQVLRLYSN 234
>gi|345779559|ref|XP_003431867.1| PREDICTED: protein scribble homolog, partial [Canis lupus
familiaris]
Length = 1656
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE L
Sbjct: 173 LEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEEL 232
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P+++ L L + N + L + L +L + +D N++ V + + NL +
Sbjct: 233 PAELGGLLLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSEL 291
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L N +T++ SL LTKL L N+L E L +I G L + L N++
Sbjct: 292 ILTENLLTALPRSLGKLTKLTNLNADRNRL-EVLPPEIGGCAALSVLSLRDNRL 344
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L ++N+LE LP +
Sbjct: 268 LKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNADRNRLEVLPPE 327
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I + L L +NR+ +L L +L V ++ N++ + F H NL ++ L
Sbjct: 328 IGGCAALSVLSLRDNRLATLPAELAHTAELHVLDVAGNRLQSL---PFALTHLNLKALWL 384
Query: 184 QNNQITSM 191
NQ M
Sbjct: 385 AENQAQPM 392
Score = 43.9 bits (102), Expect = 0.064, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L L L L LN+ L++L
Sbjct: 81 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQAL 140
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LPS + +L L N + L L L L+
Sbjct: 141 PGDVGNLANLVTLELRENLLKSLPSSLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELW 200
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L + L D
Sbjct: 201 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQN-LLQRLPDG 258
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 259 IGQLKQLSILKVDQNRL 275
>gi|312371004|gb|EFR19286.1| hypothetical protein AND_22755 [Anopheles darlingi]
Length = 1353
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRG 81
T + P+ + L PAL L L N+I + FP +I+ L++ FN LT L
Sbjct: 153 TATSPIDVEALAALPALKFLDLSRNSIQELQYTVFPERNSIQYLNLNFNKLTLLT----- 207
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNR 140
+G L L+ L I N LE + S Q +QL SL NNNR
Sbjct: 208 -----------------KGTFDRLPVLKRLEISSNALEEVQSLTFQNLNQLKSLKLNNNR 250
Query: 141 ITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
I +L DG+ GLT + + ++ N I +R+ NL +L +++L N+I + S T
Sbjct: 251 IPALMDGVFHGLTTIGILELNNNSIRTIRKGGLFNLTSLGTLALARNEIAEIEHSGWEFT 310
Query: 200 -KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
KL L LS+NQL L L+T+ L N I G
Sbjct: 311 PKLISLDLSYNQLKSLDRYTFEELSSLKTLQLQGNSIAAIG 351
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLG 132
++ GLT + L LNNN ++++ +G L L+ L L + +N++ + S + +L
Sbjct: 255 MDGVFHGLTTIGILELNNNSIRTIRKGGLFNLTSLGTLALARNEIAEIEHSGWEFTPKLI 314
Query: 133 SLYANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT-- 189
SL + N++ SLD L+ L+ + N I + F +L+S++L N+I+
Sbjct: 315 SLDLSYNQLKSLDRYTFEELSSLKTLQLQGNSIAAIGEGTFNETRSLESLNLNENRISWT 374
Query: 190 --SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
M GL+KL LYLS N++ + GLK L ++LS N I+
Sbjct: 375 IEDMRGPFLGLSKLERLYLSANEIKSVSRNAFLGLKSLTLLELSQNNIS 423
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 22/151 (14%)
Query: 61 TIRKLHVGFNNLTSLN------NSLRGLTDLNWLF--------LNNNRLKSLEG-QLGTL 105
TIRK G NLTSL N + + W F L+ N+LKSL+ L
Sbjct: 277 TIRK--GGLFNLTSLGTLALARNEIAEIEHSGWEFTPKLISLDLSYNQLKSLDRYTFEEL 334
Query: 106 SKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRIT----SLDGLLRGLTKLQVFNMD 160
S L+ L ++ N + A+ L SL N NRI+ + G GL+KL+ +
Sbjct: 335 SSLKTLQLQGNSIAAIGEGTFNETRSLESLNLNENRISWTIEDMRGPFLGLSKLERLYLS 394
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
N+I V R+ F L +L + L N I+S+
Sbjct: 395 ANEIKSVSRNAFLGLKSLTLLELSQNNISSI 425
>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
Length = 1119
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++ +N T + +L LT+L L L++N++K + + L+ L L++ NQ++ +P
Sbjct: 222 RLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPE 281
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I + L L + N+I + + LT L +D NQI + + L NL + L
Sbjct: 282 TIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEI-PEAITKLTNLTHLIL 340
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NQI + +++ LT L L LS NQ+TE + + + L L + LS N+I +
Sbjct: 341 SGNQIKEIPETIAKLTNLTQLALSSNQITE-IPEVLAQLTNLTQLFLSSNQITQI 394
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 2/179 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P +RKL + N L + + + + L L L +L + L L+ L L++ NQ+
Sbjct: 80 PNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQIT 139
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
+P + + L L + N+IT + L LT L N+ +NQIT + + L NL
Sbjct: 140 EIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEI-PEALAKLTNLT 198
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++L+ NQ T + +L+ LT L L LS+NQ TE + + + L L + LS N+I +
Sbjct: 199 QLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTE-IPEALAKLTNLTQLILSDNQIKEI 256
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
NNL +L L L +L L ++ N L+ + + + L+ L++ + QL +P + +
Sbjct: 67 NNLKTLPIELLSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLT 126
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L ++N+IT + L LT L N+ +NQIT + + L NL ++L NQIT
Sbjct: 127 NLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEI-PEALAKLTNLTQLNLSYNQIT 185
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
+ +L+ LT L L L NQ TE + + + L L ++LSYN+
Sbjct: 186 EIPEALAKLTNLTQLNLRGNQRTE-IPEALAKLTNLTRLNLSYNQ 229
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 48 NNITHIHENAFPPT-IRKLHVGFN-------------NLTSLN----------NSLRGLT 83
N IT I E T + +L++ +N NLT LN +L LT
Sbjct: 159 NQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLT 218
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
+L L L+ N+ + L L+ L L++ NQ++ +P I + L L + N+I
Sbjct: 219 NLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKE 278
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ + LT L +D NQI + + L NL + L NQI + +++ LT L +
Sbjct: 279 IPETIAKLTNLTQLGLDGNQIKEI-PEAIAKLTNLTQLGLDGNQIKEIPEAITKLTNLTH 337
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L LS NQ+ E + + I L L + LS N+I +
Sbjct: 338 LILSGNQIKE-IPETIAKLTNLTQLALSSNQITEI 371
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 29 LTSDDLKGTPALITLL-------LVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLR 80
L+ + +K P I L L N I I E T + +L + N + + ++
Sbjct: 271 LSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAIT 330
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
LT+L L L+ N++K + + L+ L L + NQ+ +P + + L L+ ++N+
Sbjct: 331 KLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQ 390
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
IT + L LT L ++ NQIT + + ++L L+ + L+ N
Sbjct: 391 ITQIPEALAPLTNLTTLHLRVNQITQI-PEAIESLPKLELLDLRGN 435
>gi|197096773|emb|CAR62394.1| Toll-like receptor TLR22a2 [Salmo salar]
Length = 925
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 99/177 (55%), Gaps = 6/177 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPS 123
L +G N L+S+ + R LT L L L+ N + L L+ L L + NQ+ LP
Sbjct: 331 LKLGHNRLSSVPKATRNLTTLKILDLSFNIINKLGCSDFSNLTGLTQLFLFHNQIPNLPG 390
Query: 124 DI-QLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
+ Q +L L +N+I +L D + GL KLQ ++ N+++ +R+ EF++L +L+++
Sbjct: 391 CVFQDLKELRLLKLGSNKILTLNDAFMNGLHKLQTLSLASNKLSSIRKGEFKSLTSLNNL 450
Query: 182 SLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDD--IRGLKRLRTVDLSYNKI 235
L +NQI SM N + GL L L L N++T+ + + + GL L+++D+S N I
Sbjct: 451 FLFDNQIASMENGAFEGLVNLTDLLLCSNKITQIAIRNTVLTGLPLLKSLDISCNYI 507
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
QL +L +NR++S+ R LT L++ ++ FN I + +F NL L + L +NQI
Sbjct: 327 QLSTLKLGHNRLSSVPKATRNLTTLKILDLSFNIINKLGCSDFSNLTGLTQLFLFHNQIP 386
Query: 190 SMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
++ + L +L L L N++ + GL +L+T+ L+ NK++
Sbjct: 387 NLPGCVFQDLKELRLLKLGSNKILTLNDAFMNGLHKLQTLSLASNKLS 434
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF-PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
L G P L +L + N IT+++++ PP L NL + +GL+ L FL
Sbjct: 491 LTGLPLLKSLDISCNYITYVNDDKLNPPPFSHLK-SLENLRIFSQRHKGLSHLPINFLEG 549
Query: 93 NRLKS-LEGQLGTL-------------SKLQLLVIEQNQLEALPSDI-QLFSQLGSLYAN 137
LKS L Q G+L +L L I +N+ AL + L +L SLY +
Sbjct: 550 --LKSLLSFQAGSLNIKELHPDTFIPTPQLWFLDISKNEFTALTLKLFHLIPRLNSLYLS 607
Query: 138 NNRITSLDGLLRG-LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS 193
R+ SLD L+ L+++ + N IT+V +L L + +Q+N T S
Sbjct: 608 KARLQSLDFLIGANLSRVTFLQVSKNDITVVNETVLHSLPALTYLDMQDNAFTCGCS 664
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 59 PPTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQN 116
P + L + N ++ + +GL++L L ++ N++ ++ G LG L LQ L + N
Sbjct: 30 PRKVINLDLAMNKISKIKKLDFKGLSNLKILNMSRNQISQVDDGALGYLEALQELGLAHN 89
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+L L D L +GL L + ++D N I + FQ L
Sbjct: 90 RLTTLS----------------------DHLFQGLVNLSLLHLDNNLIATISSSSFQPLS 127
Query: 177 NLDSISLQNNQITSMN--SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK-RLRTVDLSYN 233
+L +++L NN + +M + L L LY+ N+ T F +I LR +DLS N
Sbjct: 128 SLKTVNLTNNNLYNMKDVQPIVQLPHLHELYIGSNRFTSFQSQEISNTSIELRLLDLSRN 187
Query: 234 KINKF 238
+ F
Sbjct: 188 PLGIF 192
>gi|449514350|ref|XP_004177207.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Taeniopygia guttata]
Length = 1452
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTVVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITM----------------------VRRDEFQNLH 176
N T + +L L+ L+ F MD N++T+ V +
Sbjct: 194 NEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGISGCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L + L +N + + S+ L K+ L + NQL +L D I GL + +D S+N+I
Sbjct: 254 SLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLI-YLPDSIGGLISVEELDCSFNEI 311
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL--------VI 113
+ +L +G N T + L L+ L +++ NRL + G +GTL +L L V+
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVV 245
Query: 114 EQ---------------NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
E+ N L+ LP I ++ +L + N++ L + GL ++ +
Sbjct: 246 EEGISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLIYLPDSIGGLISVEELD 305
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
FN+I + Q L N+ + + +N +T + S + + L+L N+L EFL ++
Sbjct: 306 CSFNEIETLPSSVGQ-LSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKL-EFLPEE 363
Query: 219 IRGLKRLRTVDLSYNKI 235
+ +++L+ ++LS N++
Sbjct: 364 MGDMQKLKVINLSDNRL 380
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL------ 118
L V NN+ + + G L L L++N L+ L +G+L K+ L I++NQL
Sbjct: 235 LDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLIYLPDS 294
Query: 119 -----------------EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
E LPS + S + + A++N +T L + + V +
Sbjct: 295 IGGLISVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHS 354
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
N++ + +E ++ L I+L +N++ ++ + + L +L ++LS NQ
Sbjct: 355 NKLEFL-PEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQ 402
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ ++ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKT-MSRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT + I LK+L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLT-LIPGFIGTLKQLTYLDVSKNNI 242
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L V N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTVVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KILPKTMSRLTQLERLDLGSNEFTEV 199
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
IR N LT L + + + LFL++N+L+ L ++G + KL+++ + N+L+ L
Sbjct: 324 IRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNL 383
Query: 122 PSDIQLFSQLGSLYANNNRITSL 144
P QL +++ ++N+ L
Sbjct: 384 PFTFTKLQQLTAMWLSDNQSKPL 406
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 52/103 (50%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L FN + +L +S+ L+++ ++N L L ++G + +L + N+LE
Sbjct: 300 SVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEF 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQ 402
>gi|427791781|gb|JAA61342.1| Putative cytoskeletal regulator flightless-i, partial
[Rhipicephalus pulchellus]
Length = 956
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L + +L L +L L L++N L +L +G LSKL+ L+I N++++LPS I L
Sbjct: 252 NKLQKIPETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLR 311
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L A++N + L + +KL+V ++ N++ V DE +L +L ++L NQ+
Sbjct: 312 NLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNV-PDELGHLSSLRVVNLSGNQLR 370
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ SL+ L L L+LS NQ +L
Sbjct: 371 HLPVSLAKLGGLHALWLSQNQTKPLVL 397
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 25/199 (12%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
+ N + L L ++ L+LN+ L+ L G LSKL++L + +N L+ LP
Sbjct: 109 VEASVNPVGKLPEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKS 168
Query: 125 IQLFSQL-----------------GS------LYANNNRITSLDGLLRGLTKLQVFNMDF 161
+ ++L GS L+ ++NR+TSL + L KL +
Sbjct: 169 MARLTELSRLDIGQNDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASR 228
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N+I+ + DE +N+ L ++L N++ + +L L L L L N L L D I
Sbjct: 229 NRISFI-ADEIENMTMLSDLTLTTNKLQKIPETLGFLQNLTTLRLDDNHLA-TLPDSIGQ 286
Query: 222 LKRLRTVDLSYNKINKFGT 240
L +L + ++ N+I+ +
Sbjct: 287 LSKLEELIINSNEIDSLPS 305
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR-------------LKSLEGQLGTLSKL 108
+RKL++ N++ +L +L L L L ++ N L +E + + KL
Sbjct: 60 LRKLNLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKL 119
Query: 109 -----QLLVIEQ-----NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
QLL IEQ LE LP++ S+L L N + L + LT+L +
Sbjct: 120 PEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLD 179
Query: 159 M---DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
+ DF ++ V +L +L + +N++TS+ S + L KL YL S N+++ F+
Sbjct: 180 IGQNDFTELPEV----IGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRIS-FI 234
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
D+I + L + L+ NK+ K
Sbjct: 235 ADEIENMTMLSDLTLTTNKLQKI 257
>gi|126570666|gb|ABO21267.1| variable lymphocyte receptor A diversity region [Petromyzon
marinus]
Length = 246
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 58 FPPTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQ 115
P KL + LT+L++ + GL +L WL L NN+L++L G L++L L +
Sbjct: 31 IPADTEKLDLQSTGLTTLSDTAFHGLRELTWLNLENNQLQTLSAGVFDDLTELGTLGLAN 90
Query: 116 NQLEALPSDI-QLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
NQL ALP + +QL LY N+ITSL G+ LTKL ++D NQ+ + + F
Sbjct: 91 NQLSALPLGVFDHLTQLDKLYLGGNQITSLPPGVFDSLTKLTRLDLDQNQLQSIPKGVFD 150
Query: 174 NLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHN 209
L NL + L NNQ+ S+ + + L KL + L N
Sbjct: 151 RLTNLQELRLYNNQLQSVPHGAFDRLGKLQTITLYSN 187
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
L+A+PS+I ++ L + +T+L D GL +L N++ NQ+ + F +L
Sbjct: 24 LKAVPSEIPADTE--KLDLQSTGLTTLSDTAFHGLRELTWLNLENNQLQTLSAGVFDDLT 81
Query: 177 NLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L ++ L NNQ++++ LT+L LYL NQ+T L +L +DL N++
Sbjct: 82 ELGTLGLANNQLSALPLGVFDHLTQLDKLYLGGNQITSLPPGVFDSLTKLTRLDLDQNQL 141
>gi|307104458|gb|EFN52712.1| hypothetical protein CHLNCDRAFT_56306 [Chlorella variabilis]
Length = 319
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 127/243 (52%), Gaps = 20/243 (8%)
Query: 9 DGHAVALNLIDLEPETGSHPLTSDDLKGT-PALITL------LLVNNNITHIHEN---AF 58
+ H +L+ +DL S LT++ L+ P L+ L L N ++ + E A
Sbjct: 15 NAHLPSLDEVDLPSGLTSLDLTANRLRSMEPNLLALTGLRRLCLRQNLVSQVAEVEALAS 74
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQN 116
P + L + N L +L SL T L +L ++ N ++SL L +L QL L + N
Sbjct: 75 APVLEALDLRDNQLKALP-SLAAFTSLRYLEVSYNEVRSL-APLSSLGSTQLTELFVACN 132
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
++ A+ S ++ + L +L NRI SL+GL + L LQ + N+I + D +LH
Sbjct: 133 KIAAIES-LERLALLHTLELGGNRIRSLEGLSQ-LGLLQELWLGRNRIAELG-DCLSSLH 189
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NL +SLQ+N++TSM + L T L LYLSHN + + L+ + L L+ +D++ N+I
Sbjct: 190 NLRRLSLQSNRLTSM-AGLQHCTALEELYLSHNGIEQ--LEGLDRLVNLKILDVANNRIQ 246
Query: 237 KFG 239
+ G
Sbjct: 247 RIG 249
>gi|194882623|ref|XP_001975410.1| GG20576 [Drosophila erecta]
gi|190658597|gb|EDV55810.1| GG20576 [Drosophila erecta]
Length = 1259
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 114/213 (53%), Gaps = 6/213 (2%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV--GFNNLTSLN-NSLRGLTDL 85
++S+ L P L TL L N + I N+FP +H+ FN +T++N +S L +L
Sbjct: 308 ISSEALAALPLLRTLDLSRNQLHTIELNSFPKPNSLVHLILSFNEITNVNEHSFAALNNL 367
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L LNNNRL +L ++ L++L+ L + NQLE S + + +L +N+I +L
Sbjct: 368 TDLELNNNRLSTLPIRVFKNLNRLKKLALNFNQLEINWSTFRGLESMKNLQLKSNKIRAL 427
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LA 202
DG+ + ++ ++ NQI+ + R NL L ++L N I+ + T+ L
Sbjct: 428 QDGVFYVMHNIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLE 487
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS+N + EF + L RL+T++L++N++
Sbjct: 488 VLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRL 520
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQ 163
LS L + +++N LE +P I L S L L NN ITS+ L L L+ ++ NQ
Sbjct: 270 LSNLTKVSLKRNLLEVIPKFIGL-SGLKHLVLANNHITSISSEALAALPLLRTLDLSRNQ 328
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+ + + F ++L + L N+IT++N S + L L L L++N+L+ + + L
Sbjct: 329 LHTIELNSFPKPNSLVHLILSFNEITNVNEHSFAALNNLTDLELNNNRLSTLPIRVFKNL 388
Query: 223 KRLRTVDLSYNKI 235
RL+ + L++N++
Sbjct: 389 NRLKKLALNFNQL 401
>gi|395517545|ref|XP_003762936.1| PREDICTED: protein LAP2-like, partial [Sarcophilus harrisii]
Length = 592
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 58 FPPTIRKLHV------GFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
FP I+ V N ++ L + L +L L+LN+ L+ L G L+KLQ+L
Sbjct: 4 FPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 63
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM----- 166
+ +NQL+ LP + +QL L +N T + +L L L+ F MD N++T
Sbjct: 64 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLI 123
Query: 167 -----------------VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
V + +L+ + L +N + + S+ L KL L + N
Sbjct: 124 GSLKQLTYLDVSKNNIEVVEEGISGCESLEDLLLSSNSLQQLPESIGSLKKLTTLKVDEN 183
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
QL +L D I GL + +D S+N+I +
Sbjct: 184 QLM-YLPDSIGGLVSIEELDCSFNEIEALPS 213
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N T + L L L +++ NRL + G +G+L +L L + +N +E +
Sbjct: 83 LERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIEVV 142
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
I L L ++N + L + L KL +D NQ+ M D L +++ +
Sbjct: 143 EEGISGCESLEDLLLSSNSLQQLPESIGSLKKLTTLKVDENQL-MYLPDSIGGLVSIEEL 201
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+I ++ SS+ L+ + HN L + L +I K + + L NK+
Sbjct: 202 DCSFNEIEALPSSIGQLSNIRTFAADHNYLQQ-LPQEIGSWKHVTVLFLHSNKL 254
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ + + G L L L++N L+ L +G+L KL L +++NQL LP
Sbjct: 132 LDVSKNNIEVVEEGISGCESLEDLLLSSNSLQQLPESIGSLKKLTTLKVDENQLMYLPDS 191
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR--------------- 169
I + L + N I +L + L+ ++ F D N + + +
Sbjct: 192 IGGLVSIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPQEIGSWKHVTVLFLHS 251
Query: 170 -------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
+E ++ L I+L +N++ ++ S + L +L ++LS NQ
Sbjct: 252 NKLETLPEEMGDMQKLKVINLSDNRMKNLPFSFTKLQQLTAMWLSDNQ 299
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 54/103 (52%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+I +L FN + +L +S+ L+++ ++N L+ L ++G+ + +L + N+LE
Sbjct: 197 SIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPQEIGSWKHVTVLFLHSNKLET 256
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 257 LPEEMGDMQKLKVINLSDNRMKNLPFSFTKLQQLTAMWLSDNQ 299
>gi|345308702|ref|XP_001520661.2| PREDICTED: protein LAP2 [Ornithorhynchus anatinus]
Length = 1559
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 37/243 (15%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 166 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTIVEASVNPISKLPDG 223
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL---- 134
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L
Sbjct: 224 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 283
Query: 135 -------------------YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+ + NR++ + G L L +L ++ N I MV +
Sbjct: 284 NEFSEVPEVLEQLSGLKEFWMDGNRLSFIPGFLGNLKQLTYLDVSKNSIEMV-EEGVSGC 342
Query: 176 HNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L + L +N + + S+ L KL L + NQL +L D I GL + +D S+N+I
Sbjct: 343 ESLQDLLLSSNSLQQLPESIGSLKKLTTLKIDENQLM-YLPDSIGGLISIEELDCSFNEI 401
Query: 236 NKF 238
F
Sbjct: 402 EAF 404
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N++ + + G L L L++N L+ L +G+L KL L I++NQL LP
Sbjct: 325 LDVSKNSIEMVEEGVSGCESLQDLLLSSNSLQQLPESIGSLKKLTTLKIDENQLMYLPDS 384
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L + N I + + LT ++ F D N + + E + N+ + L
Sbjct: 385 IGGLISIEELDCSFNEIEAFPPSVGQLTNIRTFAADHNFLQQL-PPEIGSWKNVTVLFLH 443
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
+N++ ++ + + KL + LS N+L
Sbjct: 444 SNKLETLPEEMGDMQKLKVINLSDNRL 470
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL------------- 108
+ +L +G N + + L L+ L +++ NRL + G LG L +L
Sbjct: 276 LERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLSFIPGFLGNLKQLTYLDVSKNSIEMV 335
Query: 109 ----------QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
Q L++ N L+ LP I +L +L + N++ L + GL ++ +
Sbjct: 336 EEGVSGCESLQDLLLSSNSLQQLPESIGSLKKLTTLKIDENQLMYLPDSIGGLISIEELD 395
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
FN+I Q L N+ + + +N + + + + L+L N+L E L ++
Sbjct: 396 CSFNEIEAFPPSVGQ-LTNIRTFAADHNFLQQLPPEIGSWKNVTVLFLHSNKL-ETLPEE 453
Query: 219 IRGLKRLRTVDLSYNKI 235
+ +++L+ ++LS N++
Sbjct: 454 MGDMQKLKVINLSDNRL 470
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 160 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 219
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 220 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 278
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ + + L L+ L ++ N+L+ F+ + LK+L +D+S N I
Sbjct: 279 LDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLS-FIPGFLGNLKQLTYLDVSKNSI 332
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 2/153 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 138 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 197
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 198 PENIKNCKVLTIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 256
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L NQL + L + L +L +DL N+ ++
Sbjct: 257 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFSE 288
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 52/103 (50%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+I +L FN + + S+ LT++ ++N L+ L ++G+ + +L + N+LE
Sbjct: 390 SIEELDCSFNEIEAFPPSVGQLTNIRTFAADHNFLQQLPPEIGSWKNVTVLFLHSNKLET 449
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 450 LPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 492
>gi|311277155|ref|XP_003135523.1| PREDICTED: biglycan [Sus scrofa]
Length = 369
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 40/242 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL----------- 75
L DD KG L L+LVNN I+ IH AF P ++KL++ N+L +
Sbjct: 106 LRKDDFKGLQHLYALVLVNNKISKIHAKAFSPLRKLQKLYISKNHLVEIPPNLPSSLAEL 165
Query: 76 ---NNSLR--------GLTDLNWLFLNNNRLKSLEGQLGTLSKLQL--LVIEQNQLEALP 122
+N +R GL ++N + + N L++ + G L+L L I + +L +P
Sbjct: 166 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 225
Query: 123 SDIQLFSQLGSLYANNNRITS--LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
D+ L L+ ++N+I + L+ LLR +KL + NQI M+ L L
Sbjct: 226 KDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRE 282
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR----GLKRLRTVDLSYNKIN 236
+ L NN+++ + + L L L +YL N +T+ ++D G+KR YN I+
Sbjct: 283 LHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR-----AYYNGIS 337
Query: 237 KF 238
F
Sbjct: 338 LF 339
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 70 NNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDIQL 127
N+++ L + +GL L L L NN++ + + L KLQ L I +N L +P ++
Sbjct: 101 NDISELRKDDFKGLQHLYALVLVNNKISKIHAKAFSPLRKLQKLYISKNHLVEIPPNLP- 159
Query: 128 FSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI--TMVRRDEFQNLHNLDSISLQ 184
S L L ++NRI + G+ GL + M N + + F L L+ + +
Sbjct: 160 -SSLAELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 217
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++T + L L L+L HN++ L+D+ +L + L +N+I
Sbjct: 218 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 266
>gi|313760570|ref|NP_001186484.1| leucine-rich repeats and immunoglobulin-like domains protein 3
precursor [Gallus gallus]
Length = 1099
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 39 ALITLL-LVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
A ITLL L +N I +I P ++ L + NN++ L S L +L++N+NR+
Sbjct: 99 ANITLLSLTSNKIANILSEHLKPFQSLETLDLSNNNISELKMSSFPSLQLKYLYINSNRI 158
Query: 96 KSLE-GQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
S+E G LS LQ+L + +N++ A+P + S L L N N+I +DGL
Sbjct: 159 TSMEPGTFDNLSTTLQVLKLNRNKISAIPQKMFKLSHLQHLELNRNKIKKIDGLT----- 213
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLT 212
FQ L L S+ LQ N IT M+ + GLT + L L HN LT
Sbjct: 214 ------------------FQGLPALKSLKLQRNGITRLMDGAFWGLTNMEVLQLDHNNLT 255
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINKF 238
E + GL L+ + LS N I++
Sbjct: 256 EVTKGWLYGLLMLQQLHLSQNAISRI 281
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 30/236 (12%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPP-TIRKLHVGFNNLTSLN-NSLRGL-TDLNW 87
S+ LK +L TL L NNNI+ + ++FP ++ L++ N +TS+ + L T L
Sbjct: 116 SEHLKPFQSLETLDLSNNNISELKMSSFPSLQLKYLYINSNRITSMEPGTFDNLSTTLQV 175
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSL-D 145
L LN N++ ++ ++ LS LQ L + +N+++ + Q L SL N IT L D
Sbjct: 176 LKLNRNKISAIPQKMFKLSHLQHLELNRNKIKKIDGLTFQGLPALKSLKLQRNGITRLMD 235
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-------------- 191
G GLT ++V +D N +T V + L L + L N I+ +
Sbjct: 236 GAFWGLTNMEVLQLDHNNLTEVTKGWLYGLLMLQQLHLSQNAISRISPDAWEFCQKLSEL 295
Query: 192 -----------NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+SS +GL+ L LY+ N++ RGL L+T+DL N+I+
Sbjct: 296 DLTFNHLARLDDSSFAGLSVLVGLYIGSNKVNYIADCAFRGLSSLQTLDLKNNEIS 351
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
+G PAL +L L N IT + + AF GLT++ L L++N
Sbjct: 214 FQGLPALKSLKLQRNGITRLMDGAF---------------------WGLTNMEVLQLDHN 252
Query: 94 RLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRG 150
L + +G L L LQ L + QN + + D F Q L L N + LD G
Sbjct: 253 NLTEVTKGWLYGLLMLQQLHLSQNAISRISPDAWEFCQKLSELDLTFNHLARLDDSSFAG 312
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYL 206
L+ L + N++ + F+ L +L ++ L+NN+I+ MN + SGL KL L L
Sbjct: 313 LSVLVGLYIGSNKVNYIADCAFRGLSSLQTLDLKNNEISWTIEDMNGAFSGLDKLRNLIL 372
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N++ GL L +DLS N I
Sbjct: 373 QGNRIRSITKKAFSGLDALEHLDLSNNAI 401
>gi|195431316|ref|XP_002063689.1| GK15777 [Drosophila willistoni]
gi|194159774|gb|EDW74675.1| GK15777 [Drosophila willistoni]
Length = 1467
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLHVGFN--NLTSLNNS----LRGLTDLNWLFLN 91
P L TL L N + I N+FP R H+ N ++ S+ L LTDL LN
Sbjct: 336 PMLKTLDLSRNRLITIEANSFPSLNRLGHLILNGNDIASVAEQAFEVLHNLTDLE---LN 392
Query: 92 NNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLR 149
NNRL SL G L++L+ L + N LE S + L L N+I +L DG+
Sbjct: 393 NNRLTSLPLGVFQNLTRLKKLALSYNHLEINWSTFRGLLSLQKLQLKANKIRALQDGVFH 452
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LAYLYLSH 208
+ ++ +D N I+ + R F NL L +SL NN I+ ++ T+ L L LSH
Sbjct: 453 VMRNIESIELDHNDISSLSRQGFFNLTKLHHLSLSNNSISRIDLDTWEFTQSLESLDLSH 512
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N ++EF + +RL++++L++NK+
Sbjct: 513 NAISEFKSGHLECQQRLKSLNLAHNKL 539
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 6/211 (2%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G AL L+L NN I I A P ++ L + N L ++ NS L L L LN
Sbjct: 310 GLSALKHLILSNNGIERISIEALSVLPMLKTLDLSRNRLITIEANSFPSLNRLGHLILNG 369
Query: 93 NRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDGLLRG 150
N + S+ Q L L L + N+L +LP + Q ++L L + N + RG
Sbjct: 370 NDIASVAEQAFEVLHNLTDLELNNNRLTSLPLGVFQNLTRLKKLALSYNHLEINWSTFRG 429
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHN 209
L LQ + N+I ++ F + N++SI L +N I+S++ LTKL +L LS+N
Sbjct: 430 LLSLQKLQLKANKIRALQDGVFHVMRNIESIELDHNDISSLSRQGFFNLTKLHHLSLSNN 489
Query: 210 QLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
++ LD + L ++DLS+N I++F +
Sbjct: 490 SISRIDLDTWEFTQSLESLDLSHNAISEFKS 520
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 88 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLD- 145
L L NN+L ++ L L L +++NQL +P + L S L L +NN I +
Sbjct: 271 LHLANNKLNDTSVLEIRNLPSLIKLTLKRNQLTVMPKFVGL-SALKHLILSNNGIERISI 329
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 204
L L L+ ++ N++ + + F +L+ L + L N I S+ + L L L
Sbjct: 330 EALSVLPMLKTLDLSRNRLITIEANSFPSLNRLGHLILNGNDIASVAEQAFEVLHNLTDL 389
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L++N+LT L + L RL+ + LSYN
Sbjct: 390 ELNNNRLTSLPLGVFQNLTRLKKLALSYN 418
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
E +NL +L ++L+ NQ+T M GL+ L +L LS+N + ++ + L L+T+DL
Sbjct: 285 EIRNLPSLIKLTLKRNQLTVM-PKFVGLSALKHLILSNNGIERISIEALSVLPMLKTLDL 343
Query: 231 SYNKI 235
S N++
Sbjct: 344 SRNRL 348
>gi|332017140|gb|EGI57939.1| Leucine-rich repeat protein soc-2-like protein [Acromyrmex
echinatior]
Length = 615
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+R+L + +T+L +S++ L L +L N+L +L ++G LS L+ L + +N L
Sbjct: 135 CVRRLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPEIGYLSNLETLALSENSLTN 194
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ ++ L L +N++ + ++ LT L + FN++ V+ + NL NL
Sbjct: 195 LPNTLENLKSLRVLDLRHNKLIVIPDVVYKLTSLTTLFLRFNRVKYVKNN-ICNLTNLTM 253
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+S + N+I + + + L L +SHN L E L +I +L T+D+ +N++
Sbjct: 254 LSFRENKIKELPAGIGELVNLLTFDVSHNHL-EHLPPEIGKCVQLSTLDVQHNEL 307
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N LT L + ++ L L L L+NN LK + + L KL++L +E+N ++ LP+
Sbjct: 440 ELNLGTNQLTKLPDDIQCLQSLEILILSNNGLKHIPTTIVNLQKLRVLDLEENYIDVLPN 499
Query: 124 DIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+I L ++L L +N++T L G LR LT L V NQ+T + +E L +L+S
Sbjct: 500 EIGLMTELQKLILQSNKLTELPRTIGHLRNLTYLSVGE---NQLTYL-PEEVGTLESLES 555
Query: 181 ISLQNNQ 187
+ L +N+
Sbjct: 556 LYLNDNK 562
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
+ LT LN + N+L +L +G+ + L + NQL LP DIQ L L +NN
Sbjct: 413 KNLTKLN---MKENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDDIQCLQSLEILILSNN 469
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
+ + + L KL+V +++ N I V +E + L + LQ+N++T + ++ L
Sbjct: 470 GLKHIPTTIVNLQKLRVLDLEENYID-VLPNEIGLMTELQKLILQSNKLTELPRTIGHLR 528
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L YL + NQLT +L +++ L+ L ++ L+ NK
Sbjct: 529 NLTYLSVGENQLT-YLPEEVGTLESLESLYLNDNK 562
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 25 GSHPLT--SDDLKGTPALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLN 76
G++ LT DD++ +L L+L NN + HI P TI R L + N + L
Sbjct: 444 GTNQLTKLPDDIQCLQSLEILILSNNGLKHI-----PTTIVNLQKLRVLDLEENYIDVLP 498
Query: 77 NSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYA 136
N + +T+L L L +N+L L +G L L L + +NQL LP ++ L SLY
Sbjct: 499 NEIGLMTELQKLILQSNKLTELPRTIGHLRNLTYLSVGENQLTYLPEEVGTLESLESLYL 558
Query: 137 NNNR 140
N+N+
Sbjct: 559 NDNK 562
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L + N L + + + LT L LFL NR+K ++ + L+ L +L +N+++
Sbjct: 204 SLRVLDLRHNKLIVIPDVVYKLTSLTTLFLRFNRVKYVKNNICNLTNLTMLSFRENKIKE 263
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP+ I L + ++N + L + +L ++ N++ + D NL +L
Sbjct: 264 LPAGIGELVNLLTFDVSHNHLEHLPPEIGKCVQLSTLDVQHNEL-LDLPDTIGNLVSLTR 322
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ ++ N++TS+ SL+ + + NQ++ + L L T+ LS N +
Sbjct: 323 LGIRYNKLTSIPKSLANCKLMDEFSVEGNQISHLPDGLLASLSYLTTITLSRNLFTSYPA 382
Query: 241 RNEGK 245
G+
Sbjct: 383 GGPGQ 387
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L TL L N + ++ N T + L N + L + L +L +++N L+
Sbjct: 227 SLTTLFLRFNRVKYVKNNICNLTNLTMLSFRENKIKELPAGIGELVNLLTFDVSHNHLEH 286
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVF 157
L ++G +L L ++ N+L LP I L L N++TS+ L + F
Sbjct: 287 LPPEIGKCVQLSTLDVQHNELLDLPDTIGNLVSLTRLGIRYNKLTSIPKSLANCKLMDEF 346
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY-LYLSHNQLTEFLL 216
+++ NQI+ + +L L +I+L N TS + G AY + + HN++ +
Sbjct: 347 SVEGNQISHLPDGLLASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSINVEHNEIDKIPY 406
Query: 217 DDIRGLKRLRTVDLSYNKIN 236
K L +++ NK+N
Sbjct: 407 GIFSRSKNLTKLNMKENKLN 426
>gi|359728058|ref|ZP_09266754.1| hypothetical protein Lwei2_14512 [Leptospira weilii str.
2006001855]
Length = 331
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N LT L + + L +L LFL N L L +G L LQ L I+ N+LEAL
Sbjct: 91 LKGLYLAENQLTVLPDEIGQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEAL 150
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++I + L ++NR+ L + L L+ N++ NQ + + + E L NL ++
Sbjct: 151 PNEIGKLNNLQKFGLSHNRLKELPKEIGRLQNLEELNLNSNQFSSLPK-EIGQLSNLKNL 209
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
L +N + ++ + L++L L L N L E L ++I L LR +DLSYN ++
Sbjct: 210 HLDHNMLANLPKEIGQLSRLETLTLFRNSL-ETLPEEIGQLWNLRELDLSYNPLS 263
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++LH+ N L +L N + L +L L++NRLK L ++G L L+ L + NQ +
Sbjct: 136 ALQELHIDNNKLEALPNEIGKLNNLQKFGLSHNRLKELPKEIGRLQNLEELNLNSNQFSS 195
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP +I S L +L+ ++N + +L + L++L+ + N + + +E L NL
Sbjct: 196 LPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETL-PEEIGQLWNLRE 254
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ L N ++S+ + L L L+L L L D+I L+ L + L+ + K
Sbjct: 255 LDLSYNPLSSIPKEIGQLKNLRILHLRKTPLAR-LPDEIGELQDLEELILNPDTFEK 310
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 100 GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNM 159
G SK ++L ++ +LE L +I LF L N+IT+L + LT+L+ +
Sbjct: 37 GHFQNPSKRKVLDLQYQRLEKLSKEIVLFKNLEWFQLTGNQITTLPREIGTLTRLKGLYL 96
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
NQ+T V DE L NL + L N ++ + + L L L++ +N+L E L ++I
Sbjct: 97 AENQLT-VLPDEIGQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKL-EALPNEI 154
Query: 220 RGLKRLRTVDLSYNKINKF 238
L L+ LS+N++ +
Sbjct: 155 GKLNNLQKFGLSHNRLKEL 173
>gi|255071311|ref|XP_002507737.1| luecine-rich repeat protein [Micromonas sp. RCC299]
gi|226523012|gb|ACO68995.1| luecine-rich repeat protein [Micromonas sp. RCC299]
Length = 363
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L +G N LTSL + LT L L LN N L S+ ++ L+ L+ L ++ NQL +
Sbjct: 187 ALKSLWLGSNRLTSLPAEIGQLTALQVLLLNANHLTSVPAEVWQLTSLEGLRLDDNQLTS 246
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++I + L L + N +TS+ + LT L+ +++ N++T + E L +L+
Sbjct: 247 VPAEIGQLTLLELLDLSGNELTSVPAWIEQLTSLEQLSLNGNRLTSLP-AEIGQLTSLEV 305
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ L++NQ+TS+ + + LT + L+L N+LT
Sbjct: 306 LYLRHNQLTSLPAEIGQLTSMRELFLWGNRLT 337
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKL 154
L ++ ++G L+ L+ L + N+L +LP++I + L L N N +TS+ + LT L
Sbjct: 175 LCAVPAEIGQLTALKSLWLGSNRLTSLPAEIGQLTALQVLLLNANHLTSVPAEVWQLTSL 234
Query: 155 QVFNMDFNQITMVRRD----------------------EFQNLHNLDSISLQNNQITSMN 192
+ +D NQ+T V + + L +L+ +SL N++TS+
Sbjct: 235 EGLRLDDNQLTSVPAEIGQLTLLELLDLSGNELTSVPAWIEQLTSLEQLSLNGNRLTSLP 294
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + LT L LYL HNQLT L +I L +R + L N++
Sbjct: 295 AEIGQLTSLEVLYLRHNQLTS-LPAEIGQLTSMRELFLWGNRLTSV 339
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L + N LTSL + LT L L+L +N+L SL ++G L+ ++ L + N+L +
Sbjct: 279 SLEQLSLNGNRLTSLPAEIGQLTSLEVLYLRHNQLTSLPAEIGQLTSMRELFLWGNRLTS 338
Query: 121 LPSDIQLFSQLGSLYANNNRIT 142
+P+ I+ G ++ +T
Sbjct: 339 VPAAIRELRAAGCNVCMDDGVT 360
>gi|421119314|ref|ZP_15579638.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410347944|gb|EKO98795.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 289
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N ++ + L +L L L N+ K++ ++G L LQ+L + NQL L
Sbjct: 99 LQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTL 158
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L ++N++T+L + L LQV N+ N++ + + + L NL ++
Sbjct: 159 PKEIGKLENLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKG-IEQLKNLQTL 217
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+T++ + L L L+L HNQ+ L D+I L+ LR + L N I
Sbjct: 218 YLNYNQLTTLPREIGRLQSLTELHLQHNQIAT-LPDEIIQLQNLRKLTLYENPI 270
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + +N ++ + L +L L L++N+L +L ++G L LQ+L + NQL L
Sbjct: 122 LQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLTTL 181
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L +NR+ +L + L LQ +++NQ+T + R E L +L +
Sbjct: 182 PKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPR-EIGRLQSLTEL 240
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
LQ+NQI ++ + L L L L N + LD IR L
Sbjct: 241 HLQHNQIATLPDEIIQLQNLRKLTLYENPIPPQELDKIRKL 281
>gi|307178582|gb|EFN67258.1| Chaoptin [Camponotus floridanus]
Length = 1206
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 39 ALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
AL+ L L NNNI E++ PP + L + N L SLR L L WL++ N LK L
Sbjct: 155 ALVWLNLDNNNIEKFSEDSLPPNMHTLSINNNLLKEFPQSLRDLKKLTWLYMRGNELKYL 214
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPS--------DIQLFSQLGSLYANNNRITSLDGLLRG 150
E S L+L+ + +N +E + + ++ F+ G N++ SL G +
Sbjct: 215 ELPDFRSSGLELIDVSENSIEWIKTPTLNNRTLKVRDFNLAG------NKLASLPGRMFD 268
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNL-DSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+ + ++ N I V + F L ++ + ++L+NN + ++ +++S L L+YLYL++N
Sbjct: 269 RLETRRIHLSSNSIRNVDSEAFHGLEDIVEYLNLENNDLPAVPTAISRLRILSYLYLANN 328
Query: 210 QL 211
++
Sbjct: 329 EI 330
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 29/221 (13%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAF---PPTIRKLHVGFNNLTSLN-NSL 79
+G L +D L + L L++N ++ I E + ++R L + +N+L +
Sbjct: 44 SGIQVLDNDALTSCDGVEALGLMSNRLSSIDEKSLLGVTDSLRSLDLSYNSLEDVPFKVF 103
Query: 80 RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNN 139
R L LNWL +++N L SL+G G + L + + +N
Sbjct: 104 RDLKKLNWLNMHSNHLTSLDGDWGRTKE----------------------TLTNAFFGDN 141
Query: 140 RITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
IT + + L N+D N I D N+ ++S+ NN + SL L
Sbjct: 142 SITEVPRIFSSFAALVWLNLDNNNIEKFSEDSLP--PNMHTLSINNNLLKEFPQSLRDLK 199
Query: 200 KLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
KL +LY+ N+L L D R L +D+S N I T
Sbjct: 200 KLTWLYMRGNELKYLELPDFRS-SGLELIDVSENSIEWIKT 239
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
Query: 48 NNITHIHENAFPPTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N I I + + +L +GFNN++ L N+ G DL L L +N L ++E
Sbjct: 622 NAIAFIDSGSMMNNLTRLDLGFNNISYLPANTFYGTPDLKSLNLRSNFLTTIESGTFAFP 681
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
L++L + N+++ L Q F GL LQ + N+I
Sbjct: 682 HLEILDLSDNKIDTLRK--QSF--------------------HGLKSLQRLELGGNEIVQ 719
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ ++F+NL +L ++L NN+I S+ + TKL L SHN+ T
Sbjct: 720 LLTEQFRNLKSLRILNLSNNKIRSLPKDVFEGTKLEILDFSHNKFT 765
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL--GTLSKLQLLVIEQNQLE 119
+R ++ N L SL + + + L++N +++++ + G ++ L +E N L
Sbjct: 249 VRDFNLAGNKLASLPGRMFDRLETRRIHLSSNSIRNVDSEAFHGLEDIVEYLNLENNDLP 308
Query: 120 ALPSDIQLFSQLGSLYANNNRI----------------------TSLDGL-LRGLTKLQV 156
A+P+ I L LY NN I SLD + + L++ Q
Sbjct: 309 AVPTAISRLRILSYLYLANNEIRNISGEAFQEFAEHLKALSLATNSLDAVPVAALSRCQR 368
Query: 157 ---FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLT 212
N+ +N+I+ V +F+ +L+ + L+NN +T + + + G KL L LS N LT
Sbjct: 369 LLHLNLGYNKISHVESGDFEWAEDLEILLLRNNFLTKLKAETFKGANKLKELSLSFNHLT 428
Query: 213 EFLLDDIRGLKR-LRTVDLSY 232
E D G++ L ++LS+
Sbjct: 429 ELDDDCFVGIEESLDILELSF 449
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 37/208 (17%)
Query: 60 PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNRLKSLEG------------------ 100
P +R + +G+N L ++ +S LT+L L L NR+K L
Sbjct: 515 PELRDVKLGYNFLEAIPESSFHNLTELLSLDLTGNRIKVLSSGSIMDCPKLVTISLAYNR 574
Query: 101 -------QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG----SLYANNNRITSLDG--L 147
L LS L+ L +E N+L L D+ +++G +L + N I +D +
Sbjct: 575 IQKMERNALYGLSSLRFLHLEFNKLTML--DLGAIAEIGGPDFALNVSYNAIAFIDSGSM 632
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ LT+L ++ FN I+ + + F +L S++L++N +T++ S L L LS
Sbjct: 633 MNNLTRL---DLGFNNISYLPANTFYGTPDLKSLNLRSNFLTTIESGTFAFPHLEILDLS 689
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N++ GLK L+ ++L N+I
Sbjct: 690 DNKIDTLRKQSFHGLKSLQRLELGGNEI 717
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 49/215 (22%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPT-----IRKLHVGFNNLTSLNNSLRGLT 83
L ++ KG L L L N++T + ++ F I +L F +LR L+
Sbjct: 406 LKAETFKGANKLKELSLSFNHLTELDDDCFVGIEESLDILELSFAFATDVFPQRALRPLS 465
Query: 84 DLNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
+L WL L+NN +++E + +L+ + +E N+L LP I L +
Sbjct: 466 NLRWLVLDNNNFQTIEATAFYSFQQLRYINMESNRLHYLPERIFL--------------S 511
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
S+ LR + + +N + + F NL L S+ L N+I ++S
Sbjct: 512 SVHPELRDV------KLGYNFLEAIPESSFHNLTELLSLDLTGNRIKVLSSG-------- 557
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
I +L T+ L+YN+I K
Sbjct: 558 ---------------SIMDCPKLVTISLAYNRIQK 577
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLE 119
T+R L++ N L L+++ + L L L NRL L + +L +L L + QN L+
Sbjct: 778 TLRDLNMAENFLDHLDSTAFPTSYLVSLNLAQNRLSILPDNSFVSLGRLLSLNVSQNILQ 837
Query: 120 ALPSDIQLFSQ-LGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
A ++ + Q L LY N + S+ L LTKL + ++ FN + +FQ L +L
Sbjct: 838 ANFKELFHYLQNLRQLYMANCGLRSIP--LLPLTKLNILDLSFNNVDETTDKQFQYLGDL 895
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L NN +TSM L L L +S N + E D G RL ++L
Sbjct: 896 KILLLVNNSLTSMPG--VRLNLLRELDVSGNPIEEMTKDSFLGYPRLEKLNL 945
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWLFLNNNR 94
P L L L +N I + + +F ++++L +G N + L R L L L L+NN+
Sbjct: 681 PHLEILDLSDNKIDTLRKQSFHGLKSLQRLELGGNEIVQLLTEQFRNLKSLRILNLSNNK 740
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSD--IQLFSQLGSLYANNNRITSLDGLLRGLT 152
++SL + +KL++L N+ +PS +++ L L N + LD +
Sbjct: 741 IRSLPKDVFEGTKLEILDFSHNKFTVVPSPSFLEVAYTLRDLNMAENFLDHLDSTAFPTS 800
Query: 153 KLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQL 211
L N+ N+++++ + F +L L S+++ N + + L L LY+++ L
Sbjct: 801 YLVSLNLAQNRLSILPDNSFVSLGRLLSLNVSQNILQANFKELFHYLQNLRQLYMANCGL 860
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINK 237
L L +L +DLS+N +++
Sbjct: 861 RSIPL---LPLTKLNILDLSFNNVDE 883
>gi|198424668|ref|XP_002131394.1| PREDICTED: similar to scribbled CG5462-PH [Ciona intestinalis]
Length = 1555
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 10/218 (4%)
Query: 29 LTSDDLKGTPA-------LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLR 80
L+ ++L+ PA L+ L + N+I + EN F ++ L + N LT L + +
Sbjct: 71 LSDNELQKIPADIAQFVYLVDLNISRNDIAELPENIKFCKSLEVLDISGNPLTKLPDGIC 130
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
L + L LN+ L + +G LSKLQ + +N L+++P + L L NN
Sbjct: 131 QLVCMKHLNLNDISLIRMPQDIGNLSKLQTMECRENLLQSIPYTLCSIGGLEQLDLGNNE 190
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+ SL L LT L+ +D N +T + D LHN+ + L N++ S+ ++ L
Sbjct: 191 LESLPDSLSELTNLRDLWLDGNHLTSL-PDSIGKLHNIVCMDLSENKLESVPETIGDLHS 249
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L LSHN + L + I LK L + + N+I+K
Sbjct: 250 ITDLTLSHN-FIDALPESIGKLKTLSILKVDQNRISKL 286
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 54 HENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSK 107
H + P +I KLH + N L S+ ++ L + L L++N + +L +G L
Sbjct: 213 HLTSLPDSIGKLHNIVCMDLSENKLESVPETIGDLHSITDLTLSHNFIDALPESIGKLKT 272
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L +L ++QN++ LPS I + + L N +T L + L K+ N+D NQ+ ++
Sbjct: 273 LSILKVDQNRISKLPSSIGDWPNITELMLTENLLTELPASIGNLQKMTTLNVDRNQLEVL 332
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
E +L+ +S+++N +T + + L T L L +S N+L + L + LK L+
Sbjct: 333 -PPELGKCSSLNILSVRDNMLTYLPTELGNATNLRVLNVSGNRL-DCLPISLASLK-LKA 389
Query: 228 VDLSYNKIN---KFGTRNEG 244
+ LS N+ KF T N G
Sbjct: 390 LWLSENQSQPLLKFQTENRG 409
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHE--NAFPPTIRKLH------VGFNNLTSLNNSLR 80
L+ + L+ P I L ++T H +A P +I KL V N ++ L +S+
Sbjct: 232 LSENKLESVPETIGDLHSITDLTLSHNFIDALPESIGKLKTLSILKVDQNRISKLPSSIG 291
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR 140
++ L L N L L +G L K+ L +++NQLE LP ++ S L L +N
Sbjct: 292 DWPNITELMLTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPELGKCSSLNILSVRDNM 351
Query: 141 ITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+T L L T L+V N+ N+ LD + + SL+ L K
Sbjct: 352 LTYLPTELGNATNLRVLNVSGNR--------------LDCLPI----------SLASL-K 386
Query: 201 LAYLYLSHNQLTEFL 215
L L+LS NQ L
Sbjct: 387 LKALWLSENQSQPLL 401
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 46/202 (22%)
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
LR L L L+ N++K L Q L KL+ L + N+L+ +P+DI F L L +
Sbjct: 37 LRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNISR 96
Query: 139 NRITSLDGLLRGLTKLQVFN---------------------MDFNQITMVRRDE------ 171
N I L ++ L+V + ++ N I+++R +
Sbjct: 97 NDIAELPENIKFCKSLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNLS 156
Query: 172 ------------------FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
++ L+ + L NN++ S+ SLS LT L L+L N LT
Sbjct: 157 KLQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTS 216
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
L D I L + +DLS NK+
Sbjct: 217 -LPDSIGKLHNIVCMDLSENKL 237
>gi|427795749|gb|JAA63326.1| Putative leucine rich repeat protein, partial [Rhipicephalus
pulchellus]
Length = 463
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L + +L L +L L L++N L +L +G LSKL+ L+I N++++LPS I L
Sbjct: 252 NKLQKIPETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLR 311
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L A++N + L + +KL+V ++ N++ V DE +L +L ++L NQ+
Sbjct: 312 NLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNV-PDELGHLSSLRVVNLSGNQLR 370
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLL 216
+ SL+ L L L+LS NQ +L
Sbjct: 371 HLPVSLAKLGGLHALWLSQNQTKPLVL 397
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 38 PALITLL------LVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
PAL +L+ + NN+ I +N + + N + L L ++ L+L
Sbjct: 75 PALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLLNIEQLYL 134
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG------------------ 132
N+ L+ L G LSKL++L + +N L+ LP + ++L
Sbjct: 135 NDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQNDFTELPEVIGS 194
Query: 133 -----SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
L+ ++NR+TSL + L KL + N+I+ + DE +N+ L ++L N+
Sbjct: 195 LPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFI-ADEIENMTMLSDLTLTTNK 253
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ + +L L L L L N L L D I L +L + ++ N+I+ +
Sbjct: 254 LQKIPETLGFLQNLTTLRLDDNHLAT-LPDSIGQLSKLEELIINSNEIDSLPS 305
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 31/203 (15%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNR-------------LKSLEGQLGTLSKL 108
+RKL++ N++ +L +L L L L ++ N L +E + + KL
Sbjct: 60 LRKLNLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKL 119
Query: 109 -----QLLVIEQ-----NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
QLL IEQ LE LP++ S+L L N + L + LT+L +
Sbjct: 120 PEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLD 179
Query: 159 M---DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFL 215
+ DF ++ V +L +L + +N++TS+ S + L KL YL S N+++ F+
Sbjct: 180 IGQNDFTELPEV----IGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRIS-FI 234
Query: 216 LDDIRGLKRLRTVDLSYNKINKF 238
D+I + L + L+ NK+ K
Sbjct: 235 ADEIENMTMLSDLTLTTNKLQKI 257
>gi|326426484|gb|EGD72054.1| TKL protein kinase [Salpingoeca sp. ATCC 50818]
Length = 1634
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 23/228 (10%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLN-----------N 77
+ +D +G P L L L +N +T + ++F G +N+TS+N +
Sbjct: 572 IDTDAFQGNPKLKRLNLQDNRLTTLTSHSF--------AGLDNITSINLKHNGIITLDPD 623
Query: 78 SLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLY 135
+ +T + LFL+NN +++L G ++L++L I QLEALP + + L L+
Sbjct: 624 AFSTVTSVTHLFLDNNPIEALPAGVFKHQTRLEVLHITNTQLEALPPGLFTATTMLKELF 683
Query: 136 ANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS- 193
RIT++DG LL LT+L + N++ ++R F L +L + L +N I S++
Sbjct: 684 LFQGRITAIDGSLLAPLTRLASLSFTNNRLVTIQRGVFNRLVSLSELYLTSNDIASVHEL 743
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
+ +G+ L L L N L + L +L+ +DL N +++ R
Sbjct: 744 AFTGMRNLTTLSLHDNNLNDLHPRIFASLSQLQYLDLGRNFLDRIHDR 791
>gi|304269114|dbj|BAJ15009.1| variable lymphocyte receptor C [Lethenteron camtschaticum]
Length = 246
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 57 AFPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIE 114
P + KL + +N L ++ + RGL L +L LNNN+L++L G L++L+ L ++
Sbjct: 37 GIPASTEKLELDYNQLERIDAKAFRGLPHLTFLSLNNNQLQTLPAGLFDQLAELKQLYLQ 96
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
NQL++LPS G+ LTKL + ++++NQ+ + F
Sbjct: 97 SNQLKSLPS----------------------GVFDSLTKLTILHLNYNQLQSIPEGIFNK 134
Query: 175 LHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L +L ++ L NNQ+ S+ + LT L LYLS NQL L +L T+ L N
Sbjct: 135 LASLQTLYLSNNQLQSIPEGIFKTLTNLQTLYLSTNQLQSIPDGAFDHLAKLETLQLHNN 194
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+L A+P+ I ++ L + N++ +D RGL L +++ NQ+ + F L
Sbjct: 30 KLTAVPTGIPASTE--KLELDYNQLERIDAKAFRGLPHLTFLSLNNNQLQTLPAGLFDQL 87
Query: 176 HNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L + LQ+NQ+ S+ S + LTKL L+L++NQL L L+T+ LS N+
Sbjct: 88 AELKQLYLQSNQLKSLPSGVFDSLTKLTILHLNYNQLQSIPEGIFNKLASLQTLYLSNNQ 147
Query: 235 I 235
+
Sbjct: 148 L 148
>gi|428186142|gb|EKX54993.1| hypothetical protein GUITHDRAFT_62926 [Guillardia theta CCMP2712]
Length = 495
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 24/194 (12%)
Query: 43 LLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ 101
LL+ NN++ I + F T+ KL + N++T + L LT+L L L N+LK+L +
Sbjct: 155 LLVAKNNLSEIPDLIFKIQTLTKLILVENHITKVPKELGLLTNLTDLVLTYNKLKTLPKE 214
Query: 102 LGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
+G L KL LV+++N + LP I+ + L L N+NRIT L LT+L++ +
Sbjct: 215 IGELWKLDYLVLDENMITELPDSIEHLTSLKELSFNDNRITRFPLSLGALTQLEILEL-- 272
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
SL N+I+ M+ +L LT+L L L+ N+L + + + IR
Sbjct: 273 --------------------SLSENRISRMHPALFKLTQLTILNLNSNRLQK-IPESIRN 311
Query: 222 LKRLRTVDLSYNKI 235
L++L T N I
Sbjct: 312 LEQLVTFSCGSNFI 325
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
I +L + N ++ ++ +L LT L L LN+NRL+ + + L +L N +E +
Sbjct: 269 ILELSLSENRISRMHPALFKLTQLTILNLNSNRLQKIPESIRNLEQLVTFSCGSNFIEDI 328
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N I + L GLT L+V ++ NQ+T + + + L NL +
Sbjct: 329 PPEICELDNLRQLVLFGNNIRHVCPELGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKEL 388
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L N + S+ SS+ L L L+L N+L E L I LK L + L+ N+I++
Sbjct: 389 WLAFNHLHSIPSSIGYLKHLEQLWLQDNEL-ESLPPQIGSLKNLNVLTLTGNRISEL 444
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 48 NNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N IT + E ++++ + NNL L NSL LT L L + N L + + +
Sbjct: 114 NEITEVPECISALQSLKEFSLSQNNLVQLPNSLPQLTGLKNLLVAKNNLSEIPDLIFKIQ 173
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
L L++ +N + +P ++ L + L L N++ +L + L KL +D N IT
Sbjct: 174 TLTKLILVENHITKVPKELGLLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENMITE 233
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ D ++L +L +S +N+IT SL LT+L L LS
Sbjct: 234 L-PDSIEHLTSLKELSFNDNRITRFPLSLGALTQLEILELS 273
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 43 LLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLEG 100
L+L NNI H+ T + L + N LT + L+ LT+L L+L N L S+
Sbjct: 341 LVLFGNNIRHVCPELGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKELWLAFNHLHSIPS 400
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
+G L L+ L ++ N+LE+LP I L L NRI+ L L+ L
Sbjct: 401 SIGYLKHLEQLWLQDNELESLPPQIGSLKNLNVLTLTGNRISELPDSLKRL 451
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 30 TSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRGLTDLNW 87
+L G L L L N +T I + +++L + FN+L S+ +S+ L L
Sbjct: 351 VCPELGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKELWLAFNHLHSIPSSIGYLKHLEQ 410
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
L+L +N L+SL Q+G+L L +L + N++ LP ++
Sbjct: 411 LWLQDNELESLPPQIGSLKNLNVLTLTGNRISELPDSLK 449
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 58 FPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQL 110
PP I R+L + NN+ + L GLT L L L+ N+L + Q L TL+ L+
Sbjct: 328 IPPEICELDNLRQLVLFGNNIRHVCPELGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKE 387
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + N L ++PS I L L+ +N + SL
Sbjct: 388 LWLAFNHLHSIPSSIGYLKHLEQLWLQDNELESLP------------------------P 423
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ +L NL+ ++L N+I+ + SL L Y
Sbjct: 424 QIGSLKNLNVLTLTGNRISELPDSLKRLEISQY 456
>gi|304269146|dbj|BAJ15025.1| variable lymphocyte receptor C [Lethenteron camtschaticum]
Length = 246
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 57 AFPPTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLE-GQLGTLSKLQLLVIE 114
P + KL + +N L ++ + RGL L +L LNNN+L++L G L++L+ L ++
Sbjct: 37 GIPASTEKLELDYNQLERIDAKAFRGLPHLTFLSLNNNQLQTLPAGLFDQLAELKQLYLQ 96
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
NQL++LPS G+ LTKL + ++++NQ+ + F
Sbjct: 97 SNQLKSLPS----------------------GVFDSLTKLTILHLNYNQLQSIPEGIFNK 134
Query: 175 LHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L +L ++ L NNQ+ S+ + LT L LYLS NQL L +L T+ L N
Sbjct: 135 LASLQTLYLSNNQLQSIPEGIFKTLTNLQTLYLSTNQLQSIPDGAFDHLAKLETLQLHNN 194
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+L A+P+ I ++ L + N++ +D RGL L +++ NQ+ + F L
Sbjct: 30 KLTAVPTGIPASTE--KLELDYNQLERIDAKAFRGLPHLTFLSLNNNQLQTLPAGLFDQL 87
Query: 176 HNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L + LQ+NQ+ S+ S + LTKL L+L++NQL L L+T+ LS N+
Sbjct: 88 AELKQLYLQSNQLKSLPSGVFDSLTKLTILHLNYNQLQSIPEGIFNKLASLQTLYLSNNQ 147
Query: 235 I 235
+
Sbjct: 148 L 148
>gi|195334819|ref|XP_002034074.1| GM21667 [Drosophila sechellia]
gi|194126044|gb|EDW48087.1| GM21667 [Drosophila sechellia]
Length = 1197
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV--GFNNLTSLN-NSLRGLTDL 85
++S+ L P L TL L N + I N+FP + +H+ FN +T++N +S L +L
Sbjct: 259 ISSEALAALPLLRTLDLSRNQLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNL 318
Query: 86 NWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+NNRL +L ++ L++L+ L + NQLE S + + +L +N+I +L
Sbjct: 319 TDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWSTFRGLESMKNLQLKSNKIRAL 378
Query: 145 -DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK-LA 202
DG+ + K++ ++ NQI+ + R NL L ++L N I+ + T+ L
Sbjct: 379 QDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLE 438
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LS+N + EF + L RL+T++L++N++
Sbjct: 439 VLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRL 471
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G L L+L NN+IT I A P +R L + N L ++ NS +L L L+
Sbjct: 242 GLSGLKHLVLANNHITSISSEALAALPLLRTLDLSRNQLHTIELNSFPKSNNLVHLILSF 301
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNNRITSLDGLL 148
N + ++ E TL+ L L + N+L LP I++F QL L N N++
Sbjct: 302 NEITNVNEHSFATLNNLTDLELSNNRLSTLP--IRVFKNLNQLKKLALNFNQLEINWSTF 359
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLS 207
RGL ++ + N+I ++ F +H +++I L NQI+S++ L LTKL +L LS
Sbjct: 360 RGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLS 419
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N ++ +D + L +DLS N IN+F
Sbjct: 420 FNAISRIEVDTWEFTQSLEVLDLSNNAINEF 450
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Query: 88 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L NN+L ++ L L + +++N LE +P + L S L L NN ITS+
Sbjct: 203 LHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFVGL-SGLKHLVLANNHITSISS 261
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
L L L+ ++ NQ+ + + F +NL + L N+IT++N S + L L L
Sbjct: 262 EALAALPLLRTLDLSRNQLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDL 321
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LS+N+L+ + + L +L+ + L++N++
Sbjct: 322 ELSNNRLSTLPIRVFKNLNQLKKLALNFNQL 352
>gi|169403998|ref|NP_001103817.1| leucine-rich repeats and immunoglobulin-like domains protein 3
precursor [Danio rerio]
gi|158325152|gb|ABW34716.1| leucine-rich repeats and immunoglobulin-like domains 3 [Danio
rerio]
Length = 1070
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 26/202 (12%)
Query: 40 LITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE 99
L TL L NNNI ++ AFPP L N LF+NNNR+ +LE
Sbjct: 135 LETLDLSNNNIVDVYAGAFPPI------------PLKN----------LFMNNNRISTLE 172
Query: 100 GQL--GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LRGLTKLQV 156
S L +L + +N+L ++P+ I L L + NR+ ++GL +GL L+
Sbjct: 173 HGCFSNLSSSLLVLKLNKNRLNSIPAKIFSLPHLQHLELSRNRLRRVEGLTFQGLHGLRS 232
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFL 215
M N I+ + F L+N++ + L+ N +T ++ L GL L L+LSHN ++
Sbjct: 233 LKMQRNGISRLMDGAFWGLNNMEVLQLEFNNLTEVSKGWLYGLLTLQQLHLSHNSISRIK 292
Query: 216 LDDIRGLKRLRTVDLSYNKINK 237
D ++L +DLS+N++++
Sbjct: 293 PDAWEFCQKLAELDLSWNQLSR 314
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
+G L +L + N I+ + + AF + L + FNNLT ++ L GL L L L
Sbjct: 224 FQGLHGLRSLKMQRNGISRLMDGAFWGLNNMEVLQLEFNNLTEVSKGWLYGLLTLQQLHL 283
Query: 91 NNNRLKSLEGQLGTLS-KLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGL 147
++N + ++ KL L + NQL L + S L L+ NNRI+ + DG
Sbjct: 284 SHNSISRIKPDAWEFCQKLAELDLSWNQLSRLEEGSFVGLSVLEQLHIGNNRISFIADGA 343
Query: 148 LRGLTKLQVFNMDFNQITMVRRD---EFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAY 203
RGLT LQ ++ FN+I+ D F L NL + LQ N+I S+ S +GL L
Sbjct: 344 FRGLTNLQTLDLKFNEISWTIEDMNGPFSALDNLRKLFLQGNRIRSVTRKSFTGLEMLEQ 403
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDL 230
L LS+N + + +K+L + L
Sbjct: 404 LDLSNNAIMSLQANAFSQMKKLSELHL 430
>gi|424841835|ref|ZP_18266460.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
gi|395320033|gb|EJF52954.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
Length = 509
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
L+ AL L + N N+ ++ P + L + N L L ++ LT L+WL L +N
Sbjct: 288 LQEIQALEELDMSNCNLVNLGAGLSLPALHWLDLSANQLRDLPSNFGQLTALSWLDLRDN 347
Query: 94 RLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
+L+ L LS+++ L++ N L + + +L L + N +T L G L +
Sbjct: 348 QLQKWPKALEELSQIRQLLLAGNFLRQINLSELDWPELEELDLSKNELTELSGQWDKLPQ 407
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L+ N++ NQ+ + D +Q L NL+ + L +NQ+ S+ SL L ++ +L L +NQ TE
Sbjct: 408 LRQLNLEKNQLAQLPED-WQPLSNLEELDLSDNQLDSLPQSLGKLDQIQWLDLRNNQFTE 466
Query: 214 F 214
F
Sbjct: 467 F 467
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 82 LTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
L +L LFL NRLKSL LG+ S L+ L + N+LE LP ++ QL L +N +
Sbjct: 222 LNNLQSLFLGYNRLKSLAANLGSCSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPL 281
Query: 142 TSLDGLLRGLTKLQVFNM-DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
L L+ + L+ +M + N + + LH LD L NQ+ + S+ LT
Sbjct: 282 GELPLFLQEIQALEELDMSNCNLVNLGAGLSLPALHWLD---LSANQLRDLPSNFGQLTA 338
Query: 201 LAYLYLSHNQLTEF 214
L++L L NQL ++
Sbjct: 339 LSWLDLRDNQLQKW 352
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L +G+N L SL +L + L L L NNRL+ L L +L++L +E N L L
Sbjct: 225 LQSLFLGYNRLKSLAANLGSCSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPLGEL 284
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +Q L L +N + +L L L L ++ NQ+ + + F L L +
Sbjct: 285 PLFLQEIQALEELDMSNCNLVNLGAGL-SLPALHWLDLSANQLRDLPSN-FGQLTALSWL 342
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L++NQ+ +L L+++ L L+ N L + L ++ L +DLS N++ +
Sbjct: 343 DLRDNQLQKWPKALEELSQIRQLLLAGNFLRQINLSEL-DWPELEELDLSKNELTEL 398
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNNSL---RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQ 117
+++KL L L + +G+ LN + +NRLK L L L +L+ L I N+
Sbjct: 17 SLKKLDASRKGLQELPREIGRSKGMKQLN---IEDNRLKDLPDSLANLGQLEWLDISDNR 73
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
L LP + +L L +NN ++ L L +L ++ NQ+ + + F L
Sbjct: 74 LSPLPKVLFQLRKLNWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQELPNN-FGQLKA 132
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L + L+ NQ++++ +S L +L L LS N T+ L ++I LK L+ + +S N + +
Sbjct: 133 LRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQ-LPEEIGQLKALKQLSISANPMPQ 191
Query: 238 FGT 240
Sbjct: 192 LAK 194
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L + N L+ L L L LNWL L+NN L L +L +L L ++ NQL+ L
Sbjct: 64 LEWLDISDNRLSPLPKVLFQLRKLNWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQEL 123
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P++ L L N++++L L +LQ ++ N T + +E L L +
Sbjct: 124 PNNFGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQL-PEEIGQLKALKQL 182
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
S+ N + + L L+ L L L E + ++I L L+++ L YN++
Sbjct: 183 SISANPMPQLAKVLGQLSNLEELQAEGLGLEE-VPEEIGQLNNLQSLFLGYNRLKSLAA 240
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 38 PALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLK 96
P L L L N +T + P +R+L++ N L L + L++L L L++N+L
Sbjct: 383 PELEELDLSKNELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWQPLSNLEELDLSDNQLD 442
Query: 97 SLEGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNN 139
SL LG L ++Q L + NQ P + L QL +LY + N
Sbjct: 443 SLPQSLGKLDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLSEN 486
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N T L + L L L ++ N + L LG LS L+ L E LE +P +I +
Sbjct: 164 NAFTQLPEEIGQLKALKQLSISANPMPQLAKVLGQLSNLEELQAEGLGLEEVPEEIGQLN 223
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT-----MVRRDE------------- 171
L SL+ NR+ SL L + L+ ++ N++ + R +
Sbjct: 224 NLQSLFLGYNRLKSLAANLGSCSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPLGE 283
Query: 172 ----FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
Q + L+ + + N + ++ + LS L L +L LS NQL + L + L L
Sbjct: 284 LPLFLQEIQALEELDMSNCNLVNLGAGLS-LPALHWLDLSANQLRD-LPSNFGQLTALSW 341
Query: 228 VDLSYNKINKF 238
+DL N++ K+
Sbjct: 342 LDLRDNQLQKW 352
>gi|260818469|ref|XP_002604405.1| hypothetical protein BRAFLDRAFT_79291 [Branchiostoma floridae]
gi|229289732|gb|EEN60416.1| hypothetical protein BRAFLDRAFT_79291 [Branchiostoma floridae]
Length = 878
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 12 AVALNLIDLEPETGSHPLTSDDLKGTPA-----LITLLLVNNNITHIHENAFPPTIRKLH 66
+N + PET S LK P + L L NN IT +N P +I +L
Sbjct: 58 PCVINRLRRTPETPCCNCDSLGLKSAPQNILKNITFLYLGNNQITSFPQN-LPKSIIRLE 116
Query: 67 VGFNNLTSLNN-SLRGLTDLNWL------------------------FLNNNRLKSLE-G 100
+ FN +TS+ +L L L+ L L +NR+K L+ G
Sbjct: 117 LRFNQITSIQTGALSKLPQLDILDVMYNRITNINPGIFSSHSLLREVILVSNRIKYLKNG 176
Query: 101 QLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFN 158
L KL+ L + +N + ++ P L SLY + N+ITS+ G+ L KL
Sbjct: 177 AFSNLPKLEYLNLHRNMITSIQPGAFTNVHNLTSLYLDQNQITSIQTGIFTDLPKLIDLI 236
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLD 217
+ NQI ++ F NL L + L+ NQITS+ + S L L YLYL N++T
Sbjct: 237 LGSNQIQSIQPGSFTNLQRLTDLELEKNQITSIQPGTFSNLPILKYLYLGKNKITSIQTG 296
Query: 218 DIRGLKRLRTVDLSYNKIN 236
L L+ + L+ N+I+
Sbjct: 297 TFSTLPSLKCLFLNENQIS 315
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 43 LLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNRLKSLE 99
++LV+N I ++ AF P + L++ N +TS+ + + +L L+L+ N++ S++
Sbjct: 163 VILVSNRIKYLKNGAFSNLPKLEYLNLHRNMITSIQPGAFTNVHNLTSLYLDQNQITSIQ 222
Query: 100 -GQLGTLSKLQLLVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQV 156
G L KL L++ NQ++++ P +L L N+ITS+ G L L+
Sbjct: 223 TGIFTDLPKLIDLILGSNQIQSIQPGSFTNLQRLTDLELEKNQITSIQPGTFSNLPILKY 282
Query: 157 FNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL 195
+ N+IT ++ F L +L + L NQI+ + S+
Sbjct: 283 LYLGKNKITSIQTGTFSTLPSLKCLFLNENQISFLPPSV 321
>gi|260784350|ref|XP_002587230.1| hypothetical protein BRAFLDRAFT_129898 [Branchiostoma floridae]
gi|229272371|gb|EEN43241.1| hypothetical protein BRAFLDRAFT_129898 [Branchiostoma floridae]
Length = 772
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 49 NITHIHENAFPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSLE-GQLGTLS 106
NI +I N P I L + +T + + LRGL LN L L +N++ ++E G L
Sbjct: 48 NILNIPSN-LPENITSLSLTSTGITEVRATDLRGLKRLNRLLLPSNKISTIESGAFDDLG 106
Query: 107 KLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQI 164
L+ I N L PS + Q L L A +N+I++L + L+GL+ ++ ++ NQI
Sbjct: 107 HLEFFDISGNALTTFPSGLFQNCPLLMQLNAGSNQISTLSEDDLKGLSHIEFLDISDNQI 166
Query: 165 TMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT-KLAYLYLSHNQLTEFLLDDIRGLK 223
T V FQ+L NL +SL N +T ++S++ T KL + LS NQ+T+ K
Sbjct: 167 TSVGGKVFQDLENLSRLSLSGNNLTDLDSTMLKYTPKLFSIDLSDNQITKISKTLFSNAK 226
Query: 224 RLRTVDLSYNKIN 236
RL + LS N I+
Sbjct: 227 RLNQIVLSNNMIS 239
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 30/229 (13%)
Query: 43 LLLVNNNITHIHENAFPP-TIRKLHVGFNN--LTSLNNSL---RGLTDLNWLFLNNNRLK 96
++L NN I+ I + AF T+ L++ NN LTS+ G ++ L LN+N++
Sbjct: 231 IVLSNNMISTIDDGAFMELTLSALNIQLNNNQLTSITKDTFKSGGKEGISSLTLNDNKIA 290
Query: 97 SLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN-NRITSL-DGLLRGLTK 153
S+E G L+ L + N+L +PS + S+ +L + N++ S G+ T+
Sbjct: 291 SIEAGAFDHAKYLRSLDLSHNELTTVPSGLMSESESLTLVSFEFNKLQSFPKGVFGSTTR 350
Query: 154 LQVFNMDFNQIT--------------------MVRRDEFQNLHNLDSISLQNNQITSMNS 193
+Q N+ NQ+T M+ + F L + +ISL NN++ + +
Sbjct: 351 VQTLNLANNQLTEVADGALDVYYLQEVDLSYNMLDKISFSGLKEVQTISLNNNKLKAPPT 410
Query: 194 SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
LS L L L N++ D +GL+RL ++L+ N +N+ GT N
Sbjct: 411 GLSDAAFLMTLDLYDNEMDMIPADAFKGLERLDRLNLA-NALNQNGTLN 458
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 18/226 (7%)
Query: 24 TGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPT--IRKLHVGFNNLTSLNNSL-R 80
TG + + DL+G L LLL +N I+ I AF + + N LT+ + L +
Sbjct: 68 TGITEVRATDLRGLKRLNRLLLPSNKISTIESGAFDDLGHLEFFDISGNALTTFPSGLFQ 127
Query: 81 GLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANN 138
L L +N++ +L E L LS ++ L I NQ+ ++ + Q L L +
Sbjct: 128 NCPLLMQLNAGSNQISTLSEDDLKGLSHIEFLDISDNQITSVGGKVFQDLENLSRLSLSG 187
Query: 139 NRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS---- 193
N +T LD +L+ KL ++ NQIT + + F N L+ I L NN I++++
Sbjct: 188 NNLTDLDSTMLKYTPKLFSIDLSDNQITKISKTLFSNAKRLNQIVLSNNMISTIDDGAFM 247
Query: 194 --SLSGLTKLAYLYLSHNQLTEFLLDDIR--GLKRLRTVDLSYNKI 235
+LS L + L++NQLT D + G + + ++ L+ NKI
Sbjct: 248 ELTLSALN----IQLNNNQLTSITKDTFKSGGKEGISSLTLNDNKI 289
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 33/270 (12%)
Query: 4 FSYFEDGHAVALNLIDLEPETGSHPLTS---DDLK--GTPALITLLLVNNNITHIHENAF 58
S +DG + L L L + ++ LTS D K G + +L L +N I I AF
Sbjct: 238 ISTIDDGAFMELTLSALNIQLNNNQLTSITKDTFKSGGKEGISSLTLNDNKIASIEAGAF 297
Query: 59 --PPTIRKLHVGFNNLTSLNNSLRGLTD-LNWLFLNNNRLKSL-EGQLGTLSKLQLLVIE 114
+R L + N LT++ + L ++ L + N+L+S +G G+ +++Q L +
Sbjct: 298 DHAKYLRSLDLSHNELTTVPSGLMSESESLTLVSFEFNKLQSFPKGVFGSTTRVQTLNLA 357
Query: 115 QNQLEALPS------------------DIQLFS---QLGSLYANNNRITSLDGLLRGLTK 153
NQL + D FS ++ ++ NNN++ + L
Sbjct: 358 NNQLTEVADGALDVYYLQEVDLSYNMLDKISFSGLKEVQTISLNNNKLKAPPTGLSDAAF 417
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQN--NQITSMNS-SLSGLTKLAYLYLSHNQ 210
L ++ N++ M+ D F+ L LD ++L N NQ ++N+ + L L L L +
Sbjct: 418 LMTLDLYDNEMDMIPADAFKGLERLDRLNLANALNQNGTLNAQAFCDLPSLQSLVLDEDH 477
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
L D + L L ++ LSYN+I T
Sbjct: 478 LQAVPTDALNCLSNLTSLTLSYNQIENITT 507
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 77 NSLRGLTDLNWLFLNN--NRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLG 132
++ +GL L+ L L N N+ +L Q L LQ LV++++ L+A+P+D + S L
Sbjct: 434 DAFKGLERLDRLNLANALNQNGTLNAQAFCDLPSLQSLVLDEDHLQAVPTDALNCLSNLT 493
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
SL + N+I ++ L N+I+MV D + NL I + +N IT ++
Sbjct: 494 SLTLSYNQIENITTDFGKSANLSALFFKGNRISMVPADMLMSYVNLSRIDMTSNSITHLS 553
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
S+ TKL L L N+++ GL L TV+L+ N
Sbjct: 554 SNSFPNTKLNTLVLEGNRISFIENGAFVGLSSLETVNLADN 594
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYL 206
LRGL +L + N+I+ + F +L +L+ + N +T+ S L L L
Sbjct: 78 LRGLKRLNRLLLPSNKISTIESGAFDDLGHLEFFDISGNALTTFPSGLFQNCPLLMQLNA 137
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTR 241
NQ++ DD++GL + +D+S N+I G +
Sbjct: 138 GSNQISTLSEDDLKGLSHIEFLDISDNQITSVGGK 172
>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
Length = 936
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + +LTS+ + +TDL +L ++NN+L S+ +G L KL L + N L++LP
Sbjct: 17 KLDLSNQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLPQ 76
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I +L LY N++ +L + L KL + ++ NQ+T V L +L+ +
Sbjct: 77 AIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCM-LPSLEVLDA 135
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
NN++++ + L KL L + NQLTE + + L L +D+S NK++ F
Sbjct: 136 SNNKLSTFPPGVEKLQKLRELGIDGNQLTE-VPPGVFLLPNLEVLDVSNNKLSTF 189
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NN ++ FPP ++KL + N LT + + L +L L ++
Sbjct: 174 PNLEVLDVSNNKLS-----TFPPGVKKLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVD 228
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
NN L + + L KL+ L I NQL +PS + L +L NN++++ + L
Sbjct: 229 NNNLSAFPPGVEKLQKLRGLGINDNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKL 288
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
KL+V ++ NQ+T V +L NL+ + + N++++ + L KL L+++ NQL
Sbjct: 289 QKLRVLHIYGNQLTEVPSG-VCSLPNLELLHVGKNKLSTFPPGVEKLQKLRELHINDNQL 347
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
TE + + L L +++S N I +
Sbjct: 348 TE-VPSGVCSLPNLELLNVSNNPIRRL 373
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 13/207 (6%)
Query: 38 PALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLN 91
P+L L NN ++ FPP + KL + N LT + + L +L L ++
Sbjct: 128 PSLEVLDASNNKLS-----TFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVLDVS 182
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
NN+L + + L KL+ L I NQL +P + L L +NN +++ + L
Sbjct: 183 NNKLSTFPPGVKKLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDNNNLSAFPPGVEKL 242
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
KL+ ++ NQ+T V +L NL+++ + NN++++ + L KL L++ NQL
Sbjct: 243 QKLRGLGINDNQLTEVPSG-VCSLPNLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQL 301
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINKF 238
TE + + L L + + NK++ F
Sbjct: 302 TE-VPSGVCSLPNLELLHVGKNKLSTF 327
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 58 FPPTIRKLH------VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL 111
PP I KL + N LT + + L L L +NN+L + + L KL+ L
Sbjct: 97 LPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEVLDASNNKLSTFPPGVEKLQKLREL 156
Query: 112 VIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE 171
I+ NQL +P + L L L +NN++++ ++ L KL+ ++ NQ+T V
Sbjct: 157 GIDGNQLTEVPPGVFLLPNLEVLDVSNNKLSTFPPGVKKLQKLRELRINDNQLTEVPPG- 215
Query: 172 FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
+L NL+ +++ NN +++ + L KL L ++ NQLTE + + L L + +
Sbjct: 216 VCSLPNLEVLNVDNNNLSAFPPGVEKLQKLRGLGINDNQLTE-VPSGVCSLPNLEALGVG 274
Query: 232 YNKINKF 238
NK++ F
Sbjct: 275 NNKLSTF 281
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P + L VG N L++ + L L L + N+L + + +L L+LL + +N+L
Sbjct: 266 PNLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTEVPSGVCSLPNLELLHVGKNKLS 325
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHN 177
P ++ +L L+ N+N++T + + L L++ N+ N I + D L N
Sbjct: 326 TFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSNNPIRRLPNDVTRLTRLKN 385
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
LD Q ++ L L KL Y S + + + D++ L+ L + L N
Sbjct: 386 LDVHCCQFDEFPRQVLQLKTLEKL-YAGQSVGRKFDMVPDEVGNLQHLWYLALENN 440
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 45 LVNNNITHIHEN---AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
L N + H+ +N FPP + R+LH+ N LT + + + L +L L ++NN +
Sbjct: 311 LPNLELLHVGKNKLSTFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSNNPI 370
Query: 96 KSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQ 155
+ L + L++L+ L + Q + P + L LYA + D + + LQ
Sbjct: 371 RRLPNDVTRLTRLKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQSVGRKFDMVPDEVGNLQ 430
Query: 156 -VFNMDF-NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
++ + N + LHNL + L NN+ + L L + L +S+N +T
Sbjct: 431 HLWYLALENNLLRTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLDISNNNITR 490
Query: 214 FLLDDIRGLKRLRTVDLSYNKI 235
L + +L+ +D+S N +
Sbjct: 491 -LPTALHRADKLKDLDVSGNPL 511
>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 378
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + L +L + L +L L L++N+L L ++ L LQ L + NQL
Sbjct: 46 PLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I+ L LY +NN++T L + L L+ N+ NQ+ + + E + L NL
Sbjct: 106 TTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISK-EIEQLKNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L NNQ+T+ + L L L+LS+NQLT F +I L+ L+ + L N++ F
Sbjct: 165 QKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF-PKEIGKLQNLQELYLHDNQLTTF 223
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL++ N LT L + L +L L L NN+LK++ ++ L LQ L ++ NQL A
Sbjct: 117 SLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTA 176
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR----------- 169
P +I L SL+ +NN++T+ + L LQ + NQ+T +
Sbjct: 177 FPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRIL 236
Query: 170 -----------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+E +L NL ++ L +NQ + + L L L+LS+NQ + +
Sbjct: 237 LLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPV-E 295
Query: 219 IRGLKRLRTVDLSYNKI 235
LK L+ + L N++
Sbjct: 296 FGQLKNLKMLSLDANQL 312
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLH------VGFNNLTSLNNSLRGLTD 84
S +++ L L L NN +T AFP I KL + N LT+ + L +
Sbjct: 155 SKEIEQLKNLQKLYLDNNQLT-----AFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 209
Query: 85 LNWLFLNNNRL-----------------------KSLEGQLGTLSKLQLLVIEQNQLEAL 121
L L+L++N+L K L ++G L LQ L + NQ + L
Sbjct: 210 LQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKIL 269
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L+ + N+ ++ L L++ ++D NQ+T + + E L NL +
Sbjct: 270 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPK-EIGKLKNLKML 328
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+L NQ+T++ + L L LYL +NQL+ + IR L
Sbjct: 329 NLDANQLTTIPKEIGQLQNLQTLYLRNNQLSIEEKERIRKL 369
>gi|284010607|dbj|BAI66783.1| variable lymphocyte receptor A [Eptatretus burgeri]
Length = 275
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 6/165 (3%)
Query: 50 ITHIHENAFPPTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSLE-GQLGTLSK 107
+T I N P +KL + +N L+ L+ ++ LT L L+LN+N+L++L G L
Sbjct: 31 LTAIPSN-IPADTKKLVLNYNKLSKLSPTVFHRLTKLRLLYLNDNKLQALPAGVFDQLKN 89
Query: 108 LQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQIT 165
L+ L + +NQL++LP+ + +QL L+ +NN++TSL + LTKL + +D N++
Sbjct: 90 LETLWLSENQLQSLPNGVFDKLTQLKELWLDNNKLTSLPPRVFDKLTKLTILGLDNNKLQ 149
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHN 209
+ F L L ++ ++NNQ+ S+ + L KL L L N
Sbjct: 150 SLPEGVFDKLTELRTLEMRNNQLKSVPEEAFDSLEKLKMLQLQEN 194
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+L A+PS+I ++ L N N+++ L + LTKL++ ++ N++ + F L
Sbjct: 30 RLTAIPSNIPADTK--KLVLNYNKLSKLSPTVFHRLTKLRLLYLNDNKLQALPAGVFDQL 87
Query: 176 HNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
NL+++ L NQ+ S+ N LT+L L+L +N+LT L +L + L NK
Sbjct: 88 KNLETLWLSENQLQSLPNGVFDKLTQLKELWLDNNKLTSLPPRVFDKLTKLTILGLDNNK 147
Query: 235 I 235
+
Sbjct: 148 L 148
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 111 LVIEQNQLEAL-PSDIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVR 168
LV+ N+L L P+ ++L LY N+N++ +L G+ L L+ + NQ+ +
Sbjct: 45 LVLNYNKLSKLSPTVFHRLTKLRLLYLNDNKLQALPAGVFDQLKNLETLWLSENQLQSLP 104
Query: 169 RDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRT 227
F L L + L NN++TS+ + LTKL L L +N+L L LRT
Sbjct: 105 NGVFDKLTQLKELWLDNNKLTSLPPRVFDKLTKLTILGLDNNKLQSLPEGVFDKLTELRT 164
Query: 228 VDLSYNKI 235
+++ N++
Sbjct: 165 LEMRNNQL 172
>gi|417785891|ref|ZP_12433591.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
gi|409950926|gb|EKO05445.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
Length = 267
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L+ N+L SL ++G L L++L + NQ +LP +I
Sbjct: 1 MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L + N+ TSL + L KL+V N+ NQ T + + E L NL+ + L N
Sbjct: 61 QLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPK-EIGQLQNLERLDLAGN 119
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
Q TS+ + L KL L L HN+ T F +IR + L+ + LS +++
Sbjct: 120 QFTSLPKEIGQLQKLEALNLDHNRFTIF-PKEIRQQQSLKWLRLSGDQL 167
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N TSL + L +L L L+ N+ SL ++G L KL++L + NQ +L
Sbjct: 42 LRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSL 101
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L N+ TSL + L KL+ N+D N+ T+ + E + +L +
Sbjct: 102 PKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPK-EIRQQQSLKWL 160
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +Q+ ++ + L L L+L NQLT L +I L+ L ++L NK+
Sbjct: 161 RLSGDQLKTLPKEILLLQNLQSLHLDGNQLTS-LPKEIGQLQNLFELNLQDNKL 213
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++ N T +R L WL L+ ++LK+L ++ L LQ L ++ NQL +L
Sbjct: 134 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSL 193
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L +N++ +L + L LQV + N ++ + + Q L
Sbjct: 194 PKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQEL 247
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N TSL + L L L L++NR ++ L+ L + +QL+ L
Sbjct: 111 LERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTL 170
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L SL+ + N++TSL + L L N+ N++ + + E + L NL +
Sbjct: 171 PKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPK-EIEQLQNLQVL 229
Query: 182 SLQNN 186
L +N
Sbjct: 230 RLYSN 234
>gi|301770779|ref|XP_002920808.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeats and
immunoglobulin-like domains protein 1-like [Ailuropoda
melanoleuca]
Length = 1100
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 31/234 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIR--KLHVGFNNLTSLNN-SLRGLT-DLNWLF 89
L+ +L L L +NNIT I FP +R +L++ N + +L + + GL+ L L
Sbjct: 133 LQAYLSLEVLDLSSNNITEIRNTCFPHGLRLKELNLASNRIGTLESGAFDGLSRSLVMLR 192
Query: 90 LNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSL-DGL 147
L+ NR+ L + L +L L + +N++ + Q L L N I+ L DG
Sbjct: 193 LSKNRITQLPMKAFKLPRLTQLDLNRNRIRVIEGLTFQGLDSLEVLKLQRNNISKLTDGA 252
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT-KLAYLYL 206
GL+++ V ++++N + V R L L + L N IT +N G KL L L
Sbjct: 253 FWGLSRIHVLHLEYNSLAEVSRGWLYGLSALHQLHLSGNSITRINREGWGFCPKLHELVL 312
Query: 207 SHNQLT----EFLLDD--------------------IRGLKRLRTVDLSYNKIN 236
S N LT E L D +GLK LR +DL +N+I+
Sbjct: 313 SFNNLTRLDEESLADLSSLSTLRLSHNSISHIAEGAFKGLKHLRVLDLDHNEIS 366
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 29 LTSDDLKGTPAL-------ITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSL 79
L +++L P+L ++L L +N I + + ++ L + NN+T + N+
Sbjct: 97 LNNNELTAVPSLGAVASHIVSLFLQHNQIRSVEGSQLQAYLSLEVLDLSSNNITEIRNTC 156
Query: 80 --RGLTDLNWLFLNNNRLKSLE-GQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLY 135
GL L L L +NR+ +LE G LS+ L +L + +N++ LP +L L
Sbjct: 157 FPHGLR-LKELNLASNRIGTLESGAFDGLSRSLVMLRLSKNRITQLPMKAFKLPRLTQLD 215
Query: 136 ANNNRITSLDGL-LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
N NRI ++GL +GL L+V + N I+ + F L + + L+ N + ++
Sbjct: 216 LNRNRIRVIEGLTFQGLDSLEVLKLQRNNISKLTDGAFWGLSRIHVLHLEYNSLAEVSRG 275
Query: 195 -LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L GL+ L L+LS N +T + +L + LS+N + +
Sbjct: 276 WLYGLSALHQLHLSGNSITRINREGWGFCPKLHELVLSFNNLTRL 320
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 13/174 (7%)
Query: 74 SLNNSLRGLTDL-----NW---LFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSD 124
SL+ RGL L W L L+ N+L ++ L LQ + + N+L A+PS
Sbjct: 49 SLDCGGRGLVALPGDLPAWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSL 108
Query: 125 IQLFSQLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ S + SL+ +N+I S++G L+ L+V ++ N IT +R F + L ++L
Sbjct: 109 GAVASHIVSLFLQHNQIRSVEGSQLQAYLSLEVLDLSSNNITEIRNTCFPHGLRLKELNL 168
Query: 184 QNNQITSMNS-SLSGLTK-LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+N+I ++ S + GL++ L L LS N++T+ + + L RL +DL+ N+I
Sbjct: 169 ASNRIGTLESGAFDGLSRSLVMLRLSKNRITQLPMKAFK-LPRLTQLDLNRNRI 221
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
Query: 34 LKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFL 90
+G +L L L NNI+ + + AF I LH+ +N+L ++ L GL+ L+ L L
Sbjct: 229 FQGLDSLEVLKLQRNNISKLTDGAFWGLSRIHVLHLEYNSLAEVSRGWLYGLSALHQLHL 288
Query: 91 NNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSL-DGL 147
+ N + + + G KL LV+ N L L + + S L +L ++N I+ + +G
Sbjct: 289 SGNSITRINREGWGFCPKLHELVLSFNNLTRLDEESLADLSSLSTLRLSHNSISHIAEGA 348
Query: 148 LRGLTKLQVFNMDFNQITMVRRD---EFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAY 203
+GL L+V ++D N+I+ D F L +L ++L N+I S+ + SGL L +
Sbjct: 349 FKGLKHLRVLDLDHNEISGTIEDTSGAFTGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEH 408
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L L N + D +K LR + +S
Sbjct: 409 LDLGENAIRSVQSDAFAKMKYLRELHIS 436
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 30/233 (12%)
Query: 42 TLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLE 99
+L L N ++ I F P ++++++ N LT++ + + + LFL +N+++S+E
Sbjct: 70 SLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSLGAVASHIVSLFLQHNQIRSVE 129
Query: 100 G-QLGTLSKLQLLVIEQNQLEAL-----PSDIQL------FSQLGSLYA----------- 136
G QL L++L + N + + P ++L +++G+L +
Sbjct: 130 GSQLQAYLSLEVLDLSSNNITEIRNTCFPHGLRLKELNLASNRIGTLESGAFDGLSRSLV 189
Query: 137 ----NNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM- 191
+ NRIT L L +L +++ N+I ++ FQ L +L+ + LQ N I+ +
Sbjct: 190 MLRLSKNRITQLPMKAFKLPRLTQLDLNRNRIRVIEGLTFQGLDSLEVLKLQRNNISKLT 249
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNEG 244
+ + GL+++ L+L +N L E + GL L + LS N I + G
Sbjct: 250 DGAFWGLSRIHVLHLEYNSLAEVSRGWLYGLSALHQLHLSGNSITRINREGWG 302
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 143 SLDGLLRGLTKL--------QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
SLD RGL L + N+ +N+++ + F++L NL + L NN++T++ S
Sbjct: 49 SLDCGGRGLVALPGDLPAWTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSL 108
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ + + L+L HNQ+ ++ L +DLS N I +
Sbjct: 109 GAVASHIVSLFLQHNQIRSVEGSQLQAYLSLEVLDLSSNNITE 151
>gi|449280067|gb|EMC87459.1| Leucine-rich repeat-containing G-protein coupled receptor 6,
partial [Columba livia]
Length = 822
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 38 PALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNNNR 94
PAL + L N I HI + AF ++ LH+ N + SL N GL L L LN N
Sbjct: 152 PALQAMTLALNQIWHIPDYAFQNLSSLVVLHLHNNRIQSLGANGFDGLHSLETLDLNYNE 211
Query: 95 LKSLEGQLGTLSKLQLLVIEQNQLEALPSD-----------------IQLFSQLGSLYAN 137
L G + TL +LQ L N ++A+P + IQ Q Y
Sbjct: 212 LLEFPGAIRTLGRLQELGFHNNNIKAIPENAFVGNPLLQTIHFYDNPIQFVGQSAFQYLP 271
Query: 138 NNRITSLDGL--------LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
SL+G L+G T L+V + I ++ R Q L +L + L +NQI
Sbjct: 272 KLHTLSLNGAADIREFPDLKGTTSLEVLTLTRAGIHLLPRGMCQQLPSLRVLELSHNQIE 331
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ S +L L L HN++ E D L LR++DLS+N I+
Sbjct: 332 DL-PSFHRCQRLEELGLQHNRIHEIRADTFVQLMALRSIDLSWNYIH 377
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 28/216 (12%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDL 85
+ + G +L L+L NN ++ I A P ++ L + N ++ + S GL L
Sbjct: 71 IPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEKSFEGLLSL 130
Query: 86 NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITS 143
L+L++N L + + L L LQ + + NQ+ +P Q S L L+ +NNRI S
Sbjct: 131 RHLWLDDNALTEIPVRALNHLPALQAMTLALNQIWHIPDYAFQNLSSLVVLHLHNNRIQS 190
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L + F LH+L+++ L N++ ++ L +L
Sbjct: 191 LGA-----------------------NGFDGLHSLETLDLNYNELLEFPGAIRTLGRLQE 227
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
L +N + + G L+T+ N I G
Sbjct: 228 LGFHNNNIKAIPENAFVGNPLLQTIHFYDNPIQFVG 263
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 25/113 (22%)
Query: 148 LRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-------------- 193
R L L+ + NQI+ + + F L++L + LQNNQ++ + +
Sbjct: 52 FRHLRFLEELRLSGNQISRIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRL 111
Query: 194 -----------SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
S GL L +L+L N LTE + + L L+ + L+ N+I
Sbjct: 112 DANLISVVPEKSFEGLLSLRHLWLDDNALTEIPVRALNHLPALQAMTLALNQI 164
>gi|29244160|ref|NP_808376.1| reticulon-4 receptor-like 1 precursor [Mus musculus]
gi|81878376|sp|Q8K0S5.1|R4RL1_MOUSE RecName: Full=Reticulon-4 receptor-like 1; AltName: Full=Nogo
receptor-like 2; AltName: Full=Nogo-66 receptor homolog
2; AltName: Full=Nogo-66 receptor-related protein 3;
Short=NgR3; Flags: Precursor
gi|20987877|gb|AAH30471.1| Reticulon 4 receptor-like 1 [Mus musculus]
gi|26328969|dbj|BAC28223.1| unnamed protein product [Mus musculus]
gi|32453929|gb|AAP82835.1| nogo receptor-like 2 [Mus musculus]
gi|32978767|tpg|DAA01387.1| TPA_exp: Nogo-66 receptor-related protein 3 [Mus musculus]
gi|74150211|dbj|BAE24396.1| unnamed protein product [Mus musculus]
gi|148680851|gb|EDL12798.1| reticulon 4 receptor-like 1 [Mus musculus]
Length = 445
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 37 TPALITLLLVNNNITHIHENAFPPTI--RKLHVGFNN--LTSLNNSLRGLTDLNWLFLNN 92
+PA++TL + +NNIT I N F + +L +G N T + +GL L+ L+L
Sbjct: 75 SPAMVTLWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYK 134
Query: 93 NRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLR 149
L +L G G L LQ L ++ N +E L DI + L L+ + N++ SL G+ R
Sbjct: 135 CGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFR 194
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GL L + NQ+ V F +LH L ++ L NN +T + L+ L L +L L+
Sbjct: 195 GLVNLDRLLLHENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLAPLVALEFLRLNG 254
Query: 209 N 209
N
Sbjct: 255 N 255
>gi|324501497|gb|ADY40666.1| Protein lap1 [Ascaris suum]
Length = 1224
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L V N L ++ S+ LT L L L +N L L ++G LS LQ L ++QN LEAL
Sbjct: 154 LRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEAL 213
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L L + N++ L + L +L + N + V +L L +
Sbjct: 214 PESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCL-QVLPTSVGHLKKLAIL 272
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ N IT + ++ T L+ LYL+ N LTE + + LK LRT++L N++ + +
Sbjct: 273 KVDRNAITQLTPAVGSCTALSELYLTENLLTE-VPTSLGNLKALRTLNLDKNQLKEIPS 330
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N +T L ++ T L+ L+L N L + LG L L+ L +++NQL+ +PS
Sbjct: 272 LKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPST 331
Query: 125 IQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFN 162
I L L +N + L G L L L V N N
Sbjct: 332 IGGCISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLN 372
>gi|326911476|ref|XP_003202084.1| PREDICTED: leucine-rich repeats and immunoglobulin-like domains
protein 3-like, partial [Meleagris gallopavo]
Length = 1072
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 39 ALITLL-LVNNNITHIHENAFPP--TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRL 95
A ITLL L +N I +I P ++ L + NN++ L S L +L++N+NR+
Sbjct: 73 ANITLLSLTSNKIANILPEHLKPFQSLETLDLSNNNISELKMSSFPSLQLKYLYINSNRI 132
Query: 96 KSLE-GQLGTLSK-LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTK 153
S+E G LS LQ+L + +N++ A+P + S L L N N+I +DGL
Sbjct: 133 TSMEPGTFDNLSTTLQVLKLNRNRISAIPQKMFKLSHLQHLELNRNKIRKIDGLT----- 187
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLT 212
FQ L L S+ LQ N IT M+ + GLT + L L HN LT
Sbjct: 188 ------------------FQGLPALKSLKLQRNGITRLMDGAFWGLTNMEVLQLDHNNLT 229
Query: 213 EFLLDDIRGLKRLRTVDLSYNKINKF 238
E + GL L+ + LS N I++
Sbjct: 230 EVTKGWLYGLLMLQQLHLSQNAISRI 255
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 30/233 (12%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPP-TIRKLHVGFNNLTSLN-NSLRGL-TDLNWLFL 90
LK +L TL L NNNI+ + ++FP ++ L++ N +TS+ + L T L L L
Sbjct: 93 LKPFQSLETLDLSNNNISELKMSSFPSLQLKYLYINSNRITSMEPGTFDNLSTTLQVLKL 152
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSL-DGLL 148
N NR+ ++ ++ LS LQ L + +N++ + Q L SL N IT L DG
Sbjct: 153 NRNRISAIPQKMFKLSHLQHLELNRNKIRKIDGLTFQGLPALKSLKLQRNGITRLMDGAF 212
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM----------------- 191
GLT ++V +D N +T V + L L + L N I+ +
Sbjct: 213 WGLTNMEVLQLDHNNLTEVTKGWLYGLLMLQQLHLSQNAISRISPDAWEFCQKLSELDLT 272
Query: 192 --------NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+SS GL+ L LY+ N++ RGL L+T+DL N+I+
Sbjct: 273 FNHLARLDDSSFVGLSVLVGLYIGSNKVNYIADCAFRGLSSLQTLDLKNNEIS 325
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNN 93
+G PAL +L L N IT + + AF GLT++ L L++N
Sbjct: 188 FQGLPALKSLKLQRNGITRLMDGAF---------------------WGLTNMEVLQLDHN 226
Query: 94 RLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRG 150
L + +G L L LQ L + QN + + D F Q L L N + LD G
Sbjct: 227 NLTEVTKGWLYGLLMLQQLHLSQNAISRISPDAWEFCQKLSELDLTFNHLARLDDSSFVG 286
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT----SMNSSLSGLTKLAYLYL 206
L+ L + N++ + F+ L +L ++ L+NN+I+ MN + SGL +L L L
Sbjct: 287 LSVLVGLYIGSNKVNYIADCAFRGLSSLQTLDLKNNEISWTIEDMNGAFSGLDELRKLXL 346
Query: 207 SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N++ GL L +DLS N I
Sbjct: 347 QGNRIRSITKKAFSGLDALEHLDLSNNAI 375
>gi|390466382|ref|XP_002751289.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeats and
immunoglobulin-like domains protein 2 [Callithrix
jacchus]
Length = 1146
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 41 ITLLLVNNNITHIHENA--------FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNN 92
ITLL + N+I I +P + R N ++ + S L +L L+N
Sbjct: 198 ITLLSLXNSIIXIPRKXNAQGAFSFYPCSGRVXTSAQNIISEIKTSSFPRMQLKYLNLSN 257
Query: 93 NRLKSLE-GQLGTLSKLQLLV-IEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGL-LR 149
NR+ +LE G LS L+V + +N++ +P I L L NRI ++GL +
Sbjct: 258 NRITTLEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQ 317
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSH 208
GL L+ M N I+ ++ F L+N++ + L++N +T +N L GL L LY+S
Sbjct: 318 GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQ 377
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N + D +RL +DLSYN++
Sbjct: 378 NAIERISPDAWEFCQRLSELDLSYNQL 404
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 61 TIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQL 118
++R L + N ++ L + + GL ++ L L +N L + +G L L LQ L + QN +
Sbjct: 321 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 380
Query: 119 EALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
E + D F Q L L + N++T LD GL+ L+ N+ N++T + F+ L
Sbjct: 381 ERISPDAWEFCQRLSELDLSYNQLTHLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 440
Query: 177 NLDSISLQNNQIT----SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
NL ++ L+NN+I+ + + +GLT L L L NQ+ GL+ L +DL+
Sbjct: 441 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 500
Query: 233 NKI 235
N I
Sbjct: 501 NAI 503
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 45 LVNNNITHIHENAF---PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEG- 100
L NN IT + F ++ + + N ++ + + L L +L L NR+K +EG
Sbjct: 255 LSNNRITTLEAGCFDNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGL 314
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFS--QLGSLYANNNRITSLD-GLLRGLTKLQVF 157
L L+ L +++N + L D F + L +N +T ++ G L GL LQ
Sbjct: 315 TFQGLDSLRSLKMQRNGISKL-KDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQL 373
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLSHNQLTEFLL 216
+ N I + D ++ L + L NQ+T ++ S+ GL+ L L L N++T
Sbjct: 374 YVSQNAIERISPDAWEFCQRLSELDLSYNQLTHLDESAFVGLSLLERLNLGDNRVTHIAD 433
Query: 217 DDIRGLKRLRTVDLSYNKIN 236
R L L+T+DL N+I+
Sbjct: 434 GVFRFLSNLQTLDLRNNEIS 453
>gi|440789613|gb|ELR10919.1| SAM domain (Sterile alpha motif) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 979
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 9/185 (4%)
Query: 57 AFPPTIRKL----HVGFN--NLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
+ PP + KL +G N +L +L N L LT L L L N+L L + L L
Sbjct: 553 SLPPDLGKLTKLKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNK 612
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L + N+LE LP +I L L NN++ L L T L++ ++ N +T R
Sbjct: 613 LFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKFR-- 670
Query: 171 EFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L L + L+ N++T++ LT L L +S N+L EF + I L RL T+DL
Sbjct: 671 SVEKLCQLKDLDLKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFPV-TITELPRLETLDL 729
Query: 231 SYNKI 235
N++
Sbjct: 730 EANQL 734
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R L++G N L +L L LT L L L NRLK++ +L L L+ L + N+ +
Sbjct: 746 SLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQT 805
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P L SL ++N++ L + LT L+ N+D NQ+ + E L L
Sbjct: 806 FPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRL-PGEISLLTGLTE 864
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
+ + N++ ++ + ++ + L+L HN++ E
Sbjct: 865 LRVGYNELLTLPHEIGDISLIKQLHLEHNKMVEL 898
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L + N LT+L + LTDL L ++ N+L+ + L +L+ L +E NQL L
Sbjct: 678 LKDLDLKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTVL 737
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD----------- 170
+I + L SLY N++ +L L LT L+ ++ N++ + +
Sbjct: 738 APEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLD 797
Query: 171 ----EFQNLHN-------LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
EFQ + L+S+++ +NQ+ +++ + LT L L L NQL + L +I
Sbjct: 798 LSTNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQL-DRLPGEI 856
Query: 220 RGLKRLRTVDLSYNKI 235
L L + + YN++
Sbjct: 857 SLLTGLTELRVGYNEL 872
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 57 AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
FPP + L++ N + L+N + LT L L L+ N+L L G++ L+ L L + N
Sbjct: 811 CFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVGYN 870
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+L LP +I S + L+ +N++ L + L+ L++F + N + + +E N+
Sbjct: 871 ELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDL-PNEMVNMT 929
Query: 177 NLDSISLQNNQITSMNSSLSG 197
+L + + N ++ +++ G
Sbjct: 930 SLSELKVDGNPFDNLPAAVRG 950
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L VG+N L +L + + ++ + L L +N++ L +G LS L+L V+ N L LP+
Sbjct: 864 ELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPN 923
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ + L L + N +L +RG +N
Sbjct: 924 EMVNMTSLSELKVDGNPFDNLPAAVRGAGGRDTYN 958
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G+ LQ + + +L A+PS++ L L N+I SL L LTKL+ ++ N
Sbjct: 513 GSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNEN 572
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
+ + +E L +L + L+ N++T + +++ L L L+L +N+L E L ++I L
Sbjct: 573 SLRTL-PNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRL-EQLPEEIGCL 630
Query: 223 KRLRTVDLSYNKINKF 238
L + + N+++K
Sbjct: 631 VSLEMLSVRNNQLHKL 646
>gi|327287577|ref|XP_003228505.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Anolis carolinensis]
Length = 612
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 50 ITHIHENAFPPTIRKLHVGFNNLTSLNN-SLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSK 107
+T + EN P ++ L + NN TSL+ + R L+ L +L L + L +E L
Sbjct: 71 LTKLPEN-LPRGVKTLWLDGNNFTSLSALAFRNLSGLEFLNLQGSHLSRIEQHTFHGLEA 129
Query: 108 LQLLVIEQNQLEALPSDIQLFSQ-LGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQIT 165
L L +E+NQL+AL +I L Q L SL NNN+ + ++ G+ GL+ L N+ +N +
Sbjct: 130 LYSLFLERNQLKALAPNIFLHLQNLISLRLNNNQFSKVEEGVFAGLSNLWYLNLGWNALV 189
Query: 166 MVRRDEFQNLHNLDSISLQNNQITSMNSSL-------------------------SGLTK 200
++ F +L NL + L N++ + L S L K
Sbjct: 190 VLPDKVFHDLPNLRELVLAGNKLHYLQHQLFLSLNELRELDLSGNSLKGIKGNVFSRLQK 249
Query: 201 LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L LYL+HNQ++ G+K LR +DLS+N++
Sbjct: 250 LQKLYLNHNQISAVAPRAFVGMKSLRWLDLSHNRL 284
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 7/214 (3%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPP--TIRKLHVGFNNLTSL-NNSLRGLTDL 85
L D G +L L L +N+I + F ++ +L +G N + SL L L
Sbjct: 287 LFEDTFLGLSSLRVLRLSSNSIAGLGPRTFKDLHSLEELQLGHNRIRSLLERGFDKLGQL 346
Query: 86 NWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITS 143
+ L LN+N+++ + G LSK+ ++ + N + LP +QL SL+ N+ +T
Sbjct: 347 DVLALNDNQIEEVRAGAFLGLSKVAVMNLSGNCFKTLPDFTFTGLNQLHSLHLENSCLTR 406
Query: 144 LDGLL-RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKL 201
+ L+ L+ L+ + N I+ + NLH L + L++N++ ++ SGL L
Sbjct: 407 IRPLVFSNLSSLRRLFLRHNGISTIEEHSLDNLHELIDLDLRHNRLVRLSPNQFSGLRNL 466
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
YL LS NQL E + L+RL +DLS N +
Sbjct: 467 EYLLLSSNQLLEISPEAFAPLQRLSWLDLSNNGL 500
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 60 PTIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQ 117
P +R+L + N L L + L L +L L L+ N LK ++G + L KLQ L + NQ
Sbjct: 200 PNLRELVLAGNKLHYLQHQLFLSLNELRELDLSGNSLKGIKGNVFSRLQKLQKLYLNHNQ 259
Query: 118 LEAL-PSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
+ A+ P L L ++NR+ +L + GL+ L+V + N I + F++L
Sbjct: 260 ISAVAPRAFVGMKSLRWLDLSHNRLATLFEDTFLGLSSLRVLRLSSNSIAGLGPRTFKDL 319
Query: 176 HNLDSISLQNNQITS-MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
H+L+ + L +N+I S + L +L L L+ NQ+ E GL ++ ++LS N
Sbjct: 320 HSLEELQLGHNRIRSLLERGFDKLGQLDVLALNDNQIEEVRAGAFLGLSKVAVMNLSGN 378
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 7/207 (3%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G +L L L +N + + E+ F ++R L + N++ L + + L L L L +
Sbjct: 270 GMKSLRWLDLSHNRLATLFEDTFLGLSSLRVLRLSSNSIAGLGPRTFKDLHSLEELQLGH 329
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLR 149
NR++SL E L +L +L + NQ+E + + L S++ + + N +L D
Sbjct: 330 NRIRSLLERGFDKLGQLDVLALNDNQIEEVRAGAFLGLSKVAVMNLSGNCFKTLPDFTFT 389
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GL +L +++ + +T +R F NL +L + L++N I+++ SL L +L L L H
Sbjct: 390 GLNQLHSLHLENSCLTRIRPLVFSNLSSLRRLFLRHNGISTIEEHSLDNLHELIDLDLRH 449
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+L + GL+ L + LS N++
Sbjct: 450 NRLVRLSPNQFSGLRNLEYLLLSSNQL 476
>gi|449678883|ref|XP_002165472.2| PREDICTED: protein scribble homolog, partial [Hydra magnipapillata]
Length = 432
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 57 AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
+F + +L +G N L L +++ LT L L+L+NN L +L ++G L LQ L + +N
Sbjct: 177 SFLSKLERLDLGGNELEELPDTIGQLTCLIELWLDNNFLTTLPSEIGELKALQCLDVSEN 236
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
++E LP +I + L L+ +N + L + L KLQ+ +D N+I + D
Sbjct: 237 RIEELPEEISTLTSLTDLHCTSNALHELPQGIGCLIKLQILKVDQNEIDEI-TDCIGGCT 295
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
NL + L N I + +++ L+ L L + N+L F
Sbjct: 296 NLLEVVLSENVIEFLPAAIGKLSNLTLLNIDRNRLFTF 333
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 4/236 (1%)
Query: 4 FSYFEDGHAVALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPT-I 62
F++ + H L+ +D + +T D L+ L L L N +T + + F T +
Sbjct: 9 FAFRKRWHPRNLDYLD-KSHCSLTTVTEDILRHAGTLEELSLEGNQLTDLPKGIFRMTKL 67
Query: 63 RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALP 122
R+L + N + L N + L L L + N ++ + + KL L I N L LP
Sbjct: 68 RRLILADNEIQDLTNDISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGELP 127
Query: 123 SDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSIS 182
+ +QL + AN+ +T + + L+ L V + N I + F L L+ +
Sbjct: 128 DSLTKLNQLKTWIANDIALTEIPPEIGSLSNLVVLELRENCIKFLPLS-FSFLSKLERLD 186
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L N++ + ++ LT L L+L +N LT L +I LK L+ +D+S N+I +
Sbjct: 187 LGGNELEELPDTIGQLTCLIELWLDNNFLTT-LPSEIGELKALQCLDVSENRIEEL 241
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N + + + + G T+L + L+ N ++ L +G LS L LL I++N+L P +
Sbjct: 277 LKVDQNEIDEITDCIGGCTNLLEVVLSENVIEFLPAAIGKLSNLTLLNIDRNRLFTFPPE 336
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I TKL V + NQI + + E + +L +SL
Sbjct: 337 IG-----------------------NCTKLSVLSARDNQIVKIPK-EIGSCKSLTVLSLS 372
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQ 210
N++ S+ ++S L L L+LS NQ
Sbjct: 373 GNKLESLPFAVSTL-PLKALWLSQNQ 397
>gi|449130417|ref|ZP_21766637.1| hypothetical protein HMPREF9724_01302 [Treponema denticola SP37]
gi|448942138|gb|EMB23033.1| hypothetical protein HMPREF9724_01302 [Treponema denticola SP37]
Length = 631
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 17/216 (7%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
+ G + LT +++G AL L +N +T + + ++ L G N LTSL+ S GL
Sbjct: 91 DCGGNRLTELNVQGLTALQKLFCDDNLLTSLDVSGVTA-LQSLSCGENLLTSLDVS--GL 147
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L+ N N+L SL+ Q +L+ LQ L N+L +L ++Q L L+ N+NR+T
Sbjct: 148 TGLRELYCNRNQLSSLDVQ--SLTALQDLFCNANKLISL--NVQDLKVLQRLHCNSNRLT 203
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
SLD +R L+ LQ + N++T + + + L + N +T ++ + LT L+
Sbjct: 204 SLD--VRDLSALQELDCVGNELTSL---DVHGVTALWELECSKNMLTLLD--VQSLTSLS 256
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L S NQLT D+R L L +D S NK+
Sbjct: 257 KLDCSANQLTSL---DVRNLAALEELDCSNNKLTAL 289
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
++G + LTS D++G PAL L N +T + P + KL N LTS++ + L
Sbjct: 322 DSGRNDLTSLDVQGLPALKILSCTVNELTSLKVRDLPA-LEKLDCSVNQLTSID--ILEL 378
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L + N+ S+ + L+ L+ L NQL +L D++ + L L +N++T
Sbjct: 379 TALKELNCSLNQFTSI--NILKLTALKELDCSTNQLTSL--DVRNLAALEELDCRDNKLT 434
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
SL+ ++GL LQ N++T + E Q L L ++ N++TS+N + GLT L
Sbjct: 435 SLN--VQGLNTLQKLYCSENELTSL---EIQGLKTLQKLNCYKNKLTSLN--VQGLTALQ 487
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+L +N+LT +++GL LR ++
Sbjct: 488 WLNCGYNELTTL---NLKGLHALRDLEC 512
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 18/180 (10%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQL 118
+++L N LTSL+ + G+T L L + N L L+ Q L +LSKL NQL
Sbjct: 211 SALQELDCVGNELTSLD--VHGVTALWELECSKNMLTLLDVQSLTSLSKLD---CSANQL 265
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+L D++ + L L +NN++T+L ++GL LQ N N++T + E Q L L
Sbjct: 266 TSL--DVRNLAALEELDCSNNKLTAL--YVQGLNALQELNCSENELTSL---EIQGLTAL 318
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + N +TS++ + GL L L + N+LT + D+ L++L D S N++
Sbjct: 319 EVLDSGRNDLTSLD--VQGLPALKILSCTVNELTSLKVRDLPALEKL---DCSVNQLTSI 373
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 114 EQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQ 173
E+ L A + + L + L NR+T L+ ++GLT LQ D N +T + +
Sbjct: 70 ERTVLTATGAKVILKGAITKLDCGGNRLTELN--VQGLTALQKLFCDDNLLTSL---DVS 124
Query: 174 NLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
+ L S+S N +TS++ +SGLT L LY + NQL+ D++ L L+ + + N
Sbjct: 125 GVTALQSLSCGENLLTSLD--VSGLTGLRELYCNRNQLSSL---DVQSLTALQDLFCNAN 179
Query: 234 KI 235
K+
Sbjct: 180 KL 181
>gi|432853398|ref|XP_004067687.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Oryzias
latipes]
Length = 595
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 2/173 (1%)
Query: 40 LITLLLVNNNITHIHENA-FPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L LLL +N I+ I E+ P + L + N L +L++++ L +L L L++N+L SL
Sbjct: 79 LTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSL 138
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++ L L+ L ++QN LE LP + L L + NR+T L L LT LQ +
Sbjct: 139 PVEVCMLRNLRSLTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKIS 198
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ N+++ + D L N+ + NNQ++ + +SL+ + L L+L HN+L
Sbjct: 199 LSHNKLSCL-PDCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRL 250
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL + N ++ ++ +R L L L L++N+L +L +G L +LQ L + NQL +LP
Sbjct: 81 KLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSLPV 140
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
++ + L SL N + +L +EF L NL + L
Sbjct: 141 EVCMLRNLRSLTLQQNLLENLP------------------------EEFGQLENLTELDL 176
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
N++T + SL LT L + LSHN+L+ L D + L ++ +D S N+++
Sbjct: 177 SKNRLTDLPQSLGRLTGLQKISLSHNKLS-CLPDCLSQLTNVKLLDCSNNQLS 228
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++K+ + N L+ L + L LT++ L +NN+L + L + L+ L + N+L+ L
Sbjct: 194 LQKISLSHNKLSCLPDCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRL 253
Query: 122 PSDIQLFS-QLGSLYANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
P QL + L LY NN++ L+ L L + V + N+I V ++ LH L
Sbjct: 254 P---QLHAPALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVP-EQMSLLHTLT 309
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKR 224
+ L NN I S+ +SLS L L L + N L RG++R
Sbjct: 310 RLDLTNNDIGSLPASLSLLPNLKVLLVEGNPL--------RGIRR 346
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++GFN L + L L L L NN+LK L + L+KL+ +++ N+ ++
Sbjct: 443 SLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENLAKLRCIILSYNRFKS 502
Query: 121 LPSDI-QLFSQLGSLYANNNRITSLD----GLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P + Q+FS L A NN+++S+D L L+ L + N D I E
Sbjct: 503 FPEVLYQMFSMETVLMA-NNQVSSVDPARLARLEHLSTLDLSNNDLLSIP----PELGLC 557
Query: 176 HNLDSISLQNNQITSMNSSL 195
+L S+SLQ N + +++
Sbjct: 558 TSLRSLSLQGNPFRTPRAAI 577
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 70 NNLTSLNNSL----RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI 125
N LTS+ L LT+LN F N+L ++ L +L L + NQL+ LP+D+
Sbjct: 428 NKLTSIPARLLQLSSSLTELNLGF---NQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADM 484
Query: 126 QLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQN 185
+ ++L + + NR S +L + ++ M NQ++ V L +L ++ L N
Sbjct: 485 ENLAKLRCIILSYNRFKSFPEVLYQMFSMETVLMANNQVSSVDPARLARLEHLSTLDLSN 544
Query: 186 NQITSMNSSLSGLTKLAYLYLSHN 209
N + S+ L T L L L N
Sbjct: 545 NDLLSIPPELGLCTSLRSLSLQGN 568
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 85 LNWLFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L L++ NN++ LE QL L + +L + N++ A+P + L L L NN I S
Sbjct: 261 LKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGS 320
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRD 170
L L L L+V ++ N + +RRD
Sbjct: 321 LPASLSLLPNLKVLLVEGNPLRGIRRD 347
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 22/231 (9%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNW 87
L ++ L+ A+ L L +N I + E + T+ +L + N++ SL SL L +L
Sbjct: 274 LEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLPASLSLLPNLKV 333
Query: 88 LFLNNNRLKSLEGQLGTLSKLQLLVI-------EQNQLEALPSDIQLFSQ---------- 130
L + N L+ + L T +LL E E P+ + SQ
Sbjct: 334 LLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFPSQARINVHSIKT 393
Query: 131 LGSLYANNNRITSL-DGLLRGLTKLQVFNMDF--NQITMVRRDEFQNLHNLDSISLQNNQ 187
LG L ++ ++ S+ D V +F N++T + Q +L ++L NQ
Sbjct: 394 LGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTELNLGFNQ 453
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + L +L +L L +NQL + L D+ L +LR + LSYN+ F
Sbjct: 454 LDHCGVEVCRLLQLTHLDLRNNQLKD-LPADMENLAKLRCIILSYNRFKSF 503
>gi|351706806|gb|EHB09725.1| Leucine-rich repeat protein SHOC-2 [Heterocephalus glaber]
Length = 571
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+ N L SL + L +L L L+ N L SL L L KL++L + N+L +PS +
Sbjct: 119 IKXNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVY 178
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L +LY NRIT+++ ++ L+KL + ++ N+I + E +L NL ++ + +N
Sbjct: 179 GLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA-EIGDLCNLITLDVAHN 237
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
Q+ + + T++ L L HN+L + L D I L L + L YN+++
Sbjct: 238 QLEHLPKEIGNCTQITNLDLQHNELLD-LPDTIGNLSSLSRLGLRYNRLSAI 288
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L++ N LT + + GL L L L+NN LK L LG L KL+ L +E+N+LE+
Sbjct: 392 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 451
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP++I L L NN++T+L + LT L + N +T + +E L NL+
Sbjct: 452 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL-PEEIGTLENLEE 510
Query: 181 ISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
+ L +N + S+ L+ +KL+ + + + L+ + G
Sbjct: 511 LYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPAQIVAG 552
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++ FN +T++ ++ L+ L+ L + N++K L ++G L L L + NQLE LP +
Sbjct: 186 LYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKE 245
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I +Q+ +L +N + L + L+ L + +N+++ + R L+ ++L+
Sbjct: 246 IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLE 304
Query: 185 NNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK--FGTR 241
NN I+++ S LS L KL L L+ N + + + ++++ +N+INK FG
Sbjct: 305 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 364
Query: 242 NEGK 245
+ K
Sbjct: 365 SRAK 368
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 40 LITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
LITL + +N + H+ + T I L + N L L +++ L+ L+ L L NRL ++
Sbjct: 229 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAI 288
Query: 99 ------------------------EGQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGS 133
E L +L KL L + +N + P FS + S
Sbjct: 289 PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYS 348
Query: 134 LYANNNRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L +NRI + G+ L NM NQ+T + D F ++ ++L NQ+T +
Sbjct: 349 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLATNQLTKIP 407
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+SGL L L LS+N L + L + L++LR +DL NK+
Sbjct: 408 EDVSGLVSLEVLILSNNLLKK-LPHGLGNLRKLRELDLEENKL 449
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 32 DDLKGTPALITLLLVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+D+ G +L L+L NN + + H +R+L + N L SL N + L DL L L
Sbjct: 408 EDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 467
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITSLDGLLR 149
NN+L +L +G L+ L L + +N L LP +I L LY N+N + SL L
Sbjct: 468 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 527
Query: 150 GLTKLQVFNMD 160
+KL + +++
Sbjct: 528 LCSKLSIMSIE 538
>gi|422342464|ref|ZP_16423403.1| internalin-like protein [Treponema denticola F0402]
gi|325473622|gb|EGC76812.1| internalin-like protein [Treponema denticola F0402]
Length = 633
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 17/220 (7%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
++G + LTS D++ PAL L N +T + P + KL N LTS++ + L
Sbjct: 324 DSGRNDLTSLDVQRLPALKILSCTVNELTSLKVRDLPA-LEKLDCSVNQLTSID--ILEL 380
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L + N+ S+ + L+ L+ L NQL +L D++ + L L +N++T
Sbjct: 381 TALKELNCSLNQFTSI--NILKLTALKELDCSTNQLTSL--DVRNLAALEELDCRDNKLT 436
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
SLD +RGL LQ N++T + E Q L L ++ N++TS+N + GLT L
Sbjct: 437 SLD--VRGLNTLQKLYCSENELTSL---EIQGLKTLQKLNCYKNKLTSLN--VQGLTALQ 489
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRN 242
+L +N+LT +++GL LR ++ N + R+
Sbjct: 490 WLNCGYNELTTL---NLKGLHALRDLECFKNNLAALDVRD 526
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 17/216 (7%)
Query: 23 ETGSHPLTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGL 82
+ G + LT +++G AL L +N +T + + ++ L G N LTSL+ S GL
Sbjct: 93 DCGGNRLTELNVQGLTALQKLFCDDNLLTSLDVSGVTA-LQSLSCGENLLTSLDVS--GL 149
Query: 83 TDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRIT 142
T L L+ N N L SL+ Q +L+ LQ L N+L +L ++Q L L+ N+NR+T
Sbjct: 150 TGLRELYCNRNHLSSLDVQ--SLTALQDLFCNANKLTSL--NVQDLKVLQRLHCNSNRLT 205
Query: 143 SLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLA 202
L+ +R L+ LQ + N++T + + + L + N +T ++ + LT L+
Sbjct: 206 LLN--VRDLSALQELDCVGNELTSL---DVHGVTALWELECSKNMLTLLD--VQSLTSLS 258
Query: 203 YLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L S NQL D+R L L +D S NK+
Sbjct: 259 KLDCSANQLASL---DVRNLTALEELDCSNNKLTAL 291
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 18/180 (10%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQL 118
+++L N LTSL+ + G+T L L + N L L+ Q L +LSKL NQL
Sbjct: 213 SALQELDCVGNELTSLD--VHGVTALWELECSKNMLTLLDVQSLTSLSKLD---CSANQL 267
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+L D++ + L L +NN++T+L ++GL LQ N N++T + E Q L L
Sbjct: 268 ASL--DVRNLTALEELDCSNNKLTAL--YVQGLNALQELNCSENELTSL---EIQGLTAL 320
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + N +TS++ + L L L + N+LT + D+ L++L D S N++
Sbjct: 321 EVLDSGRNDLTSLD--VQRLPALKILSCTVNELTSLKVRDLPALEKL---DCSVNQLTSI 375
>gi|195583838|ref|XP_002081723.1| GD11167 [Drosophila simulans]
gi|194193732|gb|EDX07308.1| GD11167 [Drosophila simulans]
Length = 1197
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 12/216 (5%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHV--GFNNLTSLNN----SLRGL 82
++S+ L P L TL L N + I N+FP + +H+ FN +T++N +L L
Sbjct: 259 ISSEALAALPLLRTLDLSRNQLRTIELNSFPKSNNLVHLILSFNEITNVNEHCFATLNNL 318
Query: 83 TDLNWLFLNNNRLKSLEGQL-GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRI 141
TDL L+NNRL +L ++ L++L+ L + NQLE S + + +L +N+I
Sbjct: 319 TDLE---LSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWSTFRGLESMKNLQLKSNKI 375
Query: 142 TSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTK 200
+L DG+ + K++ ++ NQI+ + R NL L ++L N I+ + T+
Sbjct: 376 RALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQ 435
Query: 201 -LAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L L LS+N + EF + L RL+T++L++N++
Sbjct: 436 SLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRL 471
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 36 GTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN-NSLRGLTDLNWLFLNN 92
G L L+L NN+IT I A P +R L + N L ++ NS +L L L+
Sbjct: 242 GLSGLKHLVLANNHITSISSEALAALPLLRTLDLSRNQLRTIELNSFPKSNNLVHLILSF 301
Query: 93 NRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFS---QLGSLYANNNRITSLDGLL 148
N + ++ E TL+ L L + N+L LP I++F QL L N N++
Sbjct: 302 NEITNVNEHCFATLNNLTDLELSNNRLSTLP--IRVFKNLNQLKKLALNFNQLEINWSTF 359
Query: 149 RGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN-SSLSGLTKLAYLYLS 207
RGL ++ + N+I ++ F +H +++I L NQI+S++ L LTKL +L LS
Sbjct: 360 RGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLS 419
Query: 208 HNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N ++ +D + L +DLS N IN+F
Sbjct: 420 FNAISRIEVDTWEFTQSLEVLDLSNNAINEF 450
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 88 LFLNNNRLKSLEG-QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDG 146
L L NN+L ++ L L + +++N LE +P + L S L L NN ITS+
Sbjct: 203 LHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFVGL-SGLKHLVLANNHITSISS 261
Query: 147 -LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYL 204
L L L+ ++ NQ+ + + F +NL + L N+IT++N + L L L
Sbjct: 262 EALAALPLLRTLDLSRNQLRTIELNSFPKSNNLVHLILSFNEITNVNEHCFATLNNLTDL 321
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
LS+N+L+ + + L +L+ + L++N++
Sbjct: 322 ELSNNRLSTLPIRVFKNLNQLKKLALNFNQL 352
>gi|354504937|ref|XP_003514529.1| PREDICTED: reticulon-4 receptor-like 1-like [Cricetulus griseus]
Length = 505
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 37 TPALITLLLVNNNITHIHENAFPPTI--RKLHVGFNN--LTSLNNSLRGLTDLNWLFLNN 92
+PA++TL + +NNIT I N F + +L +G N T + +GL L+ L+L
Sbjct: 135 SPAMVTLWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYK 194
Query: 93 NRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLR 149
L +L G G L LQ L ++ N +E L DI + L L+ + N++ SL G+ R
Sbjct: 195 CGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFR 254
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GL L + NQ+ V F +LH L ++ L NN +T + L+ L L +L L+
Sbjct: 255 GLVNLDRLLLHENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLAPLVALEFLRLNG 314
Query: 209 N 209
N
Sbjct: 315 N 315
>gi|344258618|gb|EGW14722.1| Reticulon-4 receptor-like 1 [Cricetulus griseus]
Length = 410
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 37 TPALITLLLVNNNITHIHENAFPPTI--RKLHVGFNN--LTSLNNSLRGLTDLNWLFLNN 92
+PA++TL + +NNIT I N F + +L +G N T + +GL L+ L+L
Sbjct: 40 SPAMVTLWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYK 99
Query: 93 NRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQL-FSQLGSLYANNNRITSL-DGLLR 149
L +L G G L LQ L ++ N +E L DI + L L+ + N++ SL G+ R
Sbjct: 100 CGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFR 159
Query: 150 GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSH 208
GL L + NQ+ V F +LH L ++ L NN +T + L+ L L +L L+
Sbjct: 160 GLVNLDRLLLHENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLAPLVALEFLRLNG 219
Query: 209 N 209
N
Sbjct: 220 N 220
>gi|119602602|gb|EAW82196.1| scribbled homolog (Drosophila), isoform CRA_a [Homo sapiens]
Length = 756
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 13 VALNLIDLEPETGSHPLTSDDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNN 71
+ALN + L+ G D+ L+TL L N + + + +F + +L +G N+
Sbjct: 133 LALNDVSLQALPG-------DVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGND 185
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L ++L L +L L+L+ N+L +L +LG L +L L + +N+LE LP+++ L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLL 245
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L + N + L + L +L + +D N++ V + + NL + L N + ++
Sbjct: 246 TDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEV-TEAIGDCENLSELILTENLLMAL 304
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
SL LTKL L + N L E L +I G L + L N++
Sbjct: 305 PRSLGKLTKLTNLNVDRNHL-EALPPEIGGCVALSVLSLRDNRL 347
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L+ L + N+I I E+ F + N L+ L + L L L LN+ L++L
Sbjct: 84 LVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQAL 143
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
G +G L+ L L + +N L++LP+ + +L L N + L L L L+
Sbjct: 144 PGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELW 203
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+D NQ++ + E NL L + + N++ + + L GL L L LS N L L D
Sbjct: 204 LDRNQLSAL-PPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR-LPDG 261
Query: 219 IRGLKRLRTVDLSYNKI 235
I LK+L + + N++
Sbjct: 262 IGQLKQLSILKVDQNRL 278
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N L + ++ +L+ L L N L +L LG L+KL L +++N LEALP +
Sbjct: 271 LKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPE 330
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH-NLDSISL 183
I L L +NR+ L L T+L V ++ N++ + F H NL ++ L
Sbjct: 331 IGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSL---PFALTHLNLKALWL 387
Query: 184 QNNQITSM 191
NQ M
Sbjct: 388 AENQAQPM 395
>gi|418675871|ref|ZP_13237157.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400323636|gb|EJO71484.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 686
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 99/177 (55%), Gaps = 3/177 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R+L + N L SL+ +R L L + N L+++ ++ +L L + E+N++
Sbjct: 468 VRELGLYDNRLASLD-GIRCFPKLKELLIWGNELETISPEISSLKNLTRISAERNKISNF 526
Query: 122 PSDIQLFSQLGSLYANNNRITSL-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
P+ F + +L + N++T + +GL R L+ + NQ+ + D F+N LD+
Sbjct: 527 PNIEIAFESVINLSLDKNQLTQIPEGLTRLFPNLKSLGLSDNQLEEIPADLFENFPKLDT 586
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+SL NNQ++ + S++ L L +YL +N+ + + + ++ LK+L+ + LS N+I++
Sbjct: 587 LSLSNNQLSDLPKSIARLESLKNIYLKNNRFIQ-IPEILKELKKLKDISLSGNQISE 642
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 22/194 (11%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLF-- 89
D ++ P L LL+ N + I P I L +++ N + ++ F
Sbjct: 482 DGIRCFPKLKELLIWGNELETIS-----PEISSLK-NLTRISAERNKISNFPNIEIAFES 535
Query: 90 -----LNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRIT 142
L+ N+L + EG L+ L + NQLE +P+D+ + F +L +L +NN+++
Sbjct: 536 VINLSLDKNQLTQIPEGLTRLFPNLKSLGLSDNQLEEIPADLFENFPKLDTLSLSNNQLS 595
Query: 143 SLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLT 199
L L L + + N F QI + ++ L L ISL NQI+ + LS +T
Sbjct: 596 DLPKSIARLESLKNIYLKNNRFIQIPEILKE----LKKLKDISLSGNQISELPEFLSEMT 651
Query: 200 KLAYLYLSHNQLTE 213
+L L + +N + +
Sbjct: 652 ELKELKIGNNPIAQ 665
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
+N+L L +L L LQ L + N++ + + + FS++ L +NR+ SLDG +R
Sbjct: 429 DNQLTELPDRLADLKFLQSLNLSGNKIAQISNLNREFSEVRELGLYDNRLASLDG-IRCF 487
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
KL+ + N++ + E +L NL IS + N+I++ + + L L NQL
Sbjct: 488 PKLKELLIWGNELETI-SPEISSLKNLTRISAERNKISNFPNIEIAFESVINLSLDKNQL 546
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKINK 237
T+ R L+++ LS N++ +
Sbjct: 547 TQIPEGLTRLFPNLKSLGLSDNQLEE 572
>gi|359683881|ref|ZP_09253882.1| lipoprotein [Leptospira santarosai str. 2000030832]
Length = 440
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LT+L + L L L L NN+ +L ++GTL LQ L +E N+LE L
Sbjct: 40 VRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLEGL 99
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NN +T+L + L LQ ++ +N++ + + E L NL +
Sbjct: 100 PKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPK-EIGQLQNLKRL 158
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L +N +T++ + L L L +S NQLT L +I L++L ++LS
Sbjct: 159 YLVDNHLTTLPQEIWQLENLQTLSISGNQLT-ILPKEIGTLQKLEDLNLS 207
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 116/258 (44%), Gaps = 52/258 (20%)
Query: 29 LTSDDLKGTPALITLL-------LVNNNITHI-HENAFPPTIRKLHVGFNNLTSLNNSLR 80
L S+ L+G P I L LVNN++T + E ++ L + +N L SL +
Sbjct: 91 LESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIG 150
Query: 81 GLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDI--------------Q 126
L +L L+L +N L +L ++ L LQ L I NQL LP +I
Sbjct: 151 QLQNLKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTILPKEIGTLQKLEDLNLSGLA 210
Query: 127 LFSQ-------LGSLYANNNRITSLD---GLLRGL-------TKLQVFNMDFNQITMVRR 169
+F Q L LY +NNR+T+ G L+ L T+L F + Q+ +
Sbjct: 211 VFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEE 270
Query: 170 ------------DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLD 217
E L NL + L +NQ T+ + L KL YL+L HN+LT L
Sbjct: 271 LYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTT-LPK 329
Query: 218 DIRGLKRLRTVDLSYNKI 235
+I L+RL+ ++L N++
Sbjct: 330 EIGTLQRLKLLNLYNNRL 347
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 12/165 (7%)
Query: 76 NNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLY 135
N +L+ D+ L+L +N+L +L ++G L KL+ L + NQ ALP +I L SL
Sbjct: 31 NEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLS 90
Query: 136 ANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRD--EFQNLHNLDSISLQNNQITS 190
+NR+ L G L+ L +L + N N +T + ++ QNL NLD I N++ S
Sbjct: 91 LESNRLEGLPKEIGRLQNLKRLSLVN---NHLTTLPKEIGMLQNLQNLDLIY---NRLES 144
Query: 191 MNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + L L LYL N LT L +I L+ L+T+ +S N++
Sbjct: 145 LPKEIGQLQNLKRLYLVDNHLTT-LPQEIWQLENLQTLSISGNQL 188
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 19/208 (9%)
Query: 30 TSDDLKGTPALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLT 83
T +LKG L L NN +T FP I ++L++ LT+ + L
Sbjct: 218 TLQNLKG------LYLSNNRLT-----TFPQEIGTLQNLKELYLSSTQLTTFPKEIGQLQ 266
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L L+L + +L +L ++G L L+LL + NQ P +I +L L+ +NR+T+
Sbjct: 267 KLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTT 326
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
L + L +L++ N+ N++T + +E L NL +++L+NN++T + + L L
Sbjct: 327 LPKEIGTLQRLKLLNLYNNRLTTL-SEEIVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKD 385
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLS 231
L LS N T F +I GLK L+ + L
Sbjct: 386 LDLSGNPFTTF-PQEIVGLKHLQILRLE 412
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L++ L +L+ + L +L L L++N+ + ++G L KL+ L +E N+L L
Sbjct: 268 LEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTL 327
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L NNR+T+L + GL L+ N+ N++T++ + E L NL +
Sbjct: 328 PKEIGTLQRLKLLNLYNNRLTTLSEEIVGLQNLKNLNLRNNRLTVLPQ-EIGQLQNLKDL 386
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSH 208
L N T+ + GL L L L +
Sbjct: 387 DLSGNPFTTFPQEIVGLKHLQILRLEN 413
>gi|260788642|ref|XP_002589358.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
gi|229274535|gb|EEN45369.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
Length = 931
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ FPP + RKL++ N LT + + + L +L L + NN+L + + L KL+
Sbjct: 141 STFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLR 200
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L I NQL +P + L L NN++++ + L KL+ + NQ+T V
Sbjct: 201 ELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYDNQLTEVPS 260
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF--------------- 214
+L NL+ +S+ NN++++ + L KL LY+ +NQLTE
Sbjct: 261 G-VCSLPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSV 319
Query: 215 -------LLDDIRGLKRLRTVDLSYNKINKF 238
L DD+ L RL+T+ + + ++F
Sbjct: 320 GMNPIRRLPDDVTRLTRLKTLGVPNCQFDEF 350
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LTS+ + +TDL L L+NN+L S+ +G L KL L + N L +LP I +L
Sbjct: 25 LTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQKLYRLEVHANMLTSLPQAIVTLQKL 84
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
LY N++ +L + L KL + ++ NQ+T V L +L+ + + N++++
Sbjct: 85 THLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCM-LPSLEELDVSKNKLSTF 143
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ L KL LY+ NQLTE + + L L + + NK++ F
Sbjct: 144 PPGVEKLQKLRKLYIYDNQLTE-VPSGVCSLPNLEVLGVGNNKLSTF 189
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 40 LITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L L L NN +T I E + +L V N LTSL ++ L L L++ N+L +L
Sbjct: 38 LEALDLSNNKLTSIPEAIGRLQKLYRLEVHANMLTSLPQAIVTLQKLTHLYVYRNKLANL 97
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
+ L KL LL I NQL +P + + L L + N++++ + L KL+
Sbjct: 98 PPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEELDVSKNKLSTFPPGVEKLQKLRKLY 157
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
+ NQ+T V +L NL+ + + NN++++ + L KL L + NQLTE +
Sbjct: 158 IYDNQLTEVPSG-VCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELNIYGNQLTE-VPPG 215
Query: 219 IRGLKRLRTVDLSYNKINKF 238
+ L L ++ NK++ F
Sbjct: 216 VCSLPNLEVLNFGNNKLSTF 235
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 56 NAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+ FPP + R+L++ N LT + + L +L L NN+L + + L KL+
Sbjct: 187 STFPPGVEKLQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLR 246
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L I NQL +PS + L L NN++++ + L KL+ + NQ+T V
Sbjct: 247 DLYIYDNQLTEVPSGVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLTEVPS 306
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
+L NL+ +S+ N I + ++ LT+L L + + Q EF R + +L+T+
Sbjct: 307 G-VCSLPNLEVLSVGMNPIRRLPDDVTRLTRLKTLGVPNCQFDEF----PRQMLQLKTLQ 361
Query: 230 LSYNKINKF 238
Y KF
Sbjct: 362 KLYAGGCKF 370
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
P + L+ G N L++ + L L L++ +N+L + + +L L+ L + N+L
Sbjct: 220 PNLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYDNQLTEVPSGVCSLPNLEGLSVYNNKLS 279
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR--DEFQNLHN 177
P ++ +L LY +NN++T + + L L+V ++ N I RR D+ L
Sbjct: 280 TFPPGVEKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSVGMNPI---RRLPDDVTRLTR 336
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRL 225
L ++ + N Q + L L LY + + + D++ L+ L
Sbjct: 337 LKTLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKF-DMVPDEVGNLQHL 383
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Query: 38 PALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLN 91
P L L + NN ++ FPP + R+L++ N LT + + + L +L L +
Sbjct: 266 PNLEGLSVYNNKLS-----TFPPGVEKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSVG 320
Query: 92 NNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGL 151
N ++ L + L++L+ L + Q + P + L LYA + + + L
Sbjct: 321 MNPIRRLPDDVTRLTRLKTLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDMVPDEVGNL 380
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
L ++ N + +LHNL I L NN+ ++ L L + L + +N +
Sbjct: 381 QHLWFLAVE-NNLLRTLPSTMSHLHNLRVIQLWNNKFDTVPEVLCELPAMEKLVIRNNNI 439
Query: 212 TEFLLDDIRGLKRLRTVDLSYNKI 235
T L + +LR +D+S N +
Sbjct: 440 TR-LPTVLHRADKLRDLDISGNPL 462
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T++KL+ G + + + L L +L + NN L++L + L L+++ + N+ +
Sbjct: 359 TLQKLYAGGCKFDMVPDEVGNLQHLWFLAVENNLLRTLPSTMSHLHNLRVIQLWNNKFDT 418
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
+P + + L NN IT L +L KL+ ++ N +T +D
Sbjct: 419 VPEVLCELPAMEKLVIRNNNITRLPTVLHRADKLRDLDISGNPLTYPPQD 468
>gi|187954433|gb|AAI41179.1| Erbb2ip protein [Mus musculus]
Length = 1294
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T + +
Sbjct: 194 NEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL L +N + + ++ L + L + NQL +L D I GL+ + +D S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLM-YLPDSIGGLRSIEELDCSFNEI 311
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N T + L L+ L +++ NRL + G +G+L +L L + +N +E +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMV 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
I L ++N + L + L + +D NQ+ M D L +++ +
Sbjct: 246 EEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQL-MYLPDSIGGLRSIEEL 304
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+I ++ SS+ LT + HN L + L +I K + + L NK+
Sbjct: 305 DCSFNEIEALPSSIGQLTNMRTFAADHNYLQQ-LPPEIGNWKNITVLFLHCNKL 357
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT F+ I L++L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLREFWMDGNRLT-FIPGFIGSLRQLTYLDVSKNNI 242
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ + + +L L++N L+ L +G+L + L I++NQL LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L + N I +L + LT ++ F D N + + E N N+ + L
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQL-PPEIGNWKNITVLFLH 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
N++ ++ + + KL + LS N+L
Sbjct: 354 CNKLETLPEEMGDMQKLKVINLSDNRL 380
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+I +L FN + +L +S+ LT++ ++N L+ L ++G + +L + N+LE
Sbjct: 300 SIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLET 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 402
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L NQL + L + L +L +DL N+
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNE 195
>gi|449278701|gb|EMC86492.1| Protein LAP2 [Columba livia]
Length = 1413
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTVVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITM----------------------VRRDEFQNLH 176
N T + +L L+ L+ F MD N++T+ V +
Sbjct: 194 NEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGISGCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L + L +N + + ++ L K+ L + NQL +L D + GL L +D S+N+I
Sbjct: 254 SLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLI-YLPDSVGGLISLEELDCSFNEI 311
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLL--------VI 113
+ +L +G N T + L L+ L +++ NRL + G +GTL +L L V+
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVV 245
Query: 114 EQ---------------NQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
E+ N L+ LP I ++ +L + N++ L + GL L+ +
Sbjct: 246 EEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDSVGGLISLEELD 305
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
FN+I + Q L N+ + + +N +T + S + + L+L N+L EFL ++
Sbjct: 306 CSFNEIETLPSSIGQ-LSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKL-EFLPEE 363
Query: 219 IRGLKRLRTVDLSYNKI 235
+ +++L+ ++LS N++
Sbjct: 364 MGDMQKLKVINLSDNRL 380
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL------ 118
L V NN+ + + G L L L++N L+ L +G+L K+ L I++NQL
Sbjct: 235 LDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDS 294
Query: 119 -----------------EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
E LPS I S + + A++N +T L + + V +
Sbjct: 295 VGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHS 354
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
N++ + +E ++ L I+L +N++ ++ + + L +L ++LS NQ
Sbjct: 355 NKLEFL-PEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQ 402
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ ++ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKT-MSRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT + I LK+L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLT-LIPGFIGTLKQLTYLDVSKNNI 242
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L V N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTVVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KILPKTMSRLTQLERLDLGSNEFTEV 199
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
IR N LT L + + + LFL++N+L+ L ++G + KL+++ + N+L+ L
Sbjct: 324 IRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNL 383
Query: 122 PSDIQLFSQLGSLYANNNRITSL 144
P QL +++ ++N+ L
Sbjct: 384 PFTFTKLQQLTAMWLSDNQSKPL 406
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 52/103 (50%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L FN + +L +S+ L+++ ++N L L ++G + +L + N+LE
Sbjct: 300 SLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEF 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQ 402
>gi|427783827|gb|JAA57365.1| Putative leucine-rich repeat protein shoc-2 [Rhipicephalus
pulchellus]
Length = 626
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + +++T L +S+R L+ L +L N+L +L +LG+L L+ L + +N L LP
Sbjct: 149 RLDLSKSSITVLPSSVRELSHLEEFYLYGNKLATLPDELGSLVHLETLALSENSLTTLPD 208
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ QL L +N++ + ++ LT L + FN+I V + NL NL +SL
Sbjct: 209 TLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSEN-IANLTNLTMLSL 267
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ N+I + + + LT+L S+N L + L +I +L T+D+ +N++
Sbjct: 268 RENKIRELPAGIGKLTQLVTFDASNNHL-KHLPAEIGNCVQLSTLDVQHNEL 318
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
T+ +L++G N L + + ++ L L L L+NN L+ L +G+L L++L +E+N+L+
Sbjct: 448 TMVELNLGTNQLNKIPDDIQYLVCLEVLILSNNLLRRLPATIGSLGALRVLDLEENRLDG 507
Query: 121 LPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
LP++I L L +N++T+L G L LT L V + NQI +E L N
Sbjct: 508 LPNEIGHLKNLQRLVVQSNQLTNLPRAIGYLVNLTYLSVGENNLNQIP----EEIGTLEN 563
Query: 178 LDSISLQNNQ-ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
L+S+ + +N + S+ L+ T L + + + L++ + + G
Sbjct: 564 LESLYINDNPNLHSLPFELALCTNLQIMSIENCPLSQIPAEIVNG 608
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 49 NITHIHENAFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQL 102
++ H N P + KL + FN + ++ ++ LT+L L L N+++ L +
Sbjct: 220 DVRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSENIANLTNLTMLSLRENKIRELPAGI 279
Query: 103 GTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFN 162
G L++L N L+ LP++I QL +L +N + L + L L F + +N
Sbjct: 280 GKLTQLVTFDASNNHLKHLPAEIGNCVQLSTLDVQHNELVDLPDTIGNLMVLSRFGIRYN 339
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLYLSHNQLTEFLLDDIRG 221
Q+T V + N + ++++N ++ + L + T L L LS N +
Sbjct: 340 QLTAVPKS-LSNCVLITDFNVESNLVSQLPEGLLASFTNLHTLTLSRNNFASYPSGGPAQ 398
Query: 222 LKRLRTVDLSYNKINK--FGTRNEGK 245
+ ++++ +N+INK FG + K
Sbjct: 399 FTTVTSINMEHNQINKIPFGIFSRAK 424
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 32 DDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
D+L L TL L N++T + + A +R L V N L + + LT L LFL
Sbjct: 185 DELGSLVHLETLALSENSLTTLPDTLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFL 244
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRG 150
NR++ + + L+ L +L + +N++ LP+ I +QL + A+NN + L +
Sbjct: 245 RFNRIREVSENIANLTNLTMLSLRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGN 304
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
+L ++ N++ + D NL L ++ NQ+T++ SLS + + N
Sbjct: 305 CVQLSTLDVQHNELVDL-PDTIGNLMVLSRFGIRYNQLTAVPKSLSNCVLITDFNVESNL 363
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+++ + L T+ LS N + +
Sbjct: 364 VSQLPEGLLASFTNLHTLTLSRNNFASYPS 393
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 39 ALITLLLVNNNITHIHENAFPPT-IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKS 97
+L TL L N I + EN T + L + N + L + LT L +NN LK
Sbjct: 238 SLTTLFLRFNRIREVSENIANLTNLTMLSLRENKIRELPAGIGKLTQLVTFDASNNHLKH 297
Query: 98 LEGQLGTLSKLQLLVIEQNQLEALPSDI---QLFSQLGSLYANNNRITSLDGLLRGLTKL 154
L ++G +L L ++ N+L LP I + S+ G Y N++T++ L +
Sbjct: 298 LPAEIGNCVQLSTLDVQHNELVDLPDTIGNLMVLSRFGIRY---NQLTAVPKSLSNCVLI 354
Query: 155 QVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTE 213
FN++ N ++ + + NL +++L N S S + T + + + HNQ+ +
Sbjct: 355 TDFNVESNLVSQLPEGLLASFTNLHTLTLSRNNFASYPSGGPAQFTTVTSINMEHNQINK 414
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKF 238
K L +++ N++
Sbjct: 415 IPFGIFSRAKHLSKLNMKENQLTSL 439
>gi|421131325|ref|ZP_15591507.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
gi|410357108|gb|EKP04375.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
Length = 300
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L N+L +L ++G L KL++L + NQL +LP +++
Sbjct: 39 MGLHELDSLPRVIGLFQNLEKLNLVGNQLTTLPKEIGRLQKLRVLNLAHNQLTSLPKEME 98
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L L ++N TS R L KL++ N+ NQ+T + + E + L NL+ + L N
Sbjct: 99 LLQNLEILNLDDNEFTSFPKETRQLQKLRILNLAGNQLTSLPK-EMELLQNLERLDLAGN 157
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + + L L L L HNQ T F +IR + L+ + LS N++
Sbjct: 158 RFKILPKEMELLQNLEALNLGHNQFTSF-PKEIRRQQNLKWLYLSRNQL 205
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LTSL + L +L L L++N S + L KL++L + NQL +L
Sbjct: 80 LRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFTSFPKETRQLQKLRILNLAGNQLTSL 139
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +++L L L NR L + L L+ N+ NQ T + E + NL +
Sbjct: 140 PKEMELLQNLERLDLAGNRFKILPKEMELLQNLEALNLGHNQFTSFPK-EIRRQQNLKWL 198
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+ +++ + L L L+L NQL+ + +I L+ L ++L NK+
Sbjct: 199 YLSRNQLKTLSKEIVELQNLQSLHLDGNQLSS-IPKEIGQLQNLFELNLQNNKL 251
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++G N TS +R +L WL+L+ N+LK+L ++ L LQ L ++ NQL ++
Sbjct: 172 LEALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSI 231
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L NN++ +L + L LQV + N + + E Q L
Sbjct: 232 PKEIGQLQNLFELNLQNNKLKTLPKEIGLLQNLQVLRLYSNPFSFKEKQEIQKL 285
>gi|348683425|gb|EGZ23240.1| hypothetical protein PHYSODRAFT_310702 [Phytophthora sojae]
Length = 460
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 5/184 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L + N L SL + L+ L LFL+ N L+ L + G LS L++L I NQL L
Sbjct: 93 LEELDLSKNALRSLLGNFCDLSALRRLFLHENALEKLPREFGALSSLKILDIRSNQLRRL 152
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN-LHNLDS 180
P S+L L + N++ L L+ L+V N+ N + + EF L +L+
Sbjct: 153 PKSFPCLSKLSRLDLSRNKLRKLPDAFGNLSALRVCNLGRNLLQEL--PEFIGMLESLEV 210
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF-- 238
++LQNN + + +S + LT L+ L L+ N++ F + LK L T+ + N++ ++
Sbjct: 211 LNLQNNALFKLAASFAELTNLSNLSLTGNRIECFPRSQLGALKTLVTLTYAQNQLRQWQP 270
Query: 239 GTRN 242
G RN
Sbjct: 271 GERN 274
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 18/184 (9%)
Query: 50 ITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQ 109
+TH A PP +L T L L L +L+ L G L L+
Sbjct: 28 VTHCELLALPP----------------ETLERATHLRDLTLEYIQLQKLPASFGCLELLE 71
Query: 110 LLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR 169
L + NQLE+LP +L L + N + SL G L+ L+ + N + + R
Sbjct: 72 RLSLAGNQLESLPLSFHQLQRLEELDLSKNALRSLLGNFCDLSALRRLFLHENALEKLPR 131
Query: 170 DEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
EF L +L + +++NQ+ + S L+KL+ L LS N+L + L D L LR +
Sbjct: 132 -EFGALSSLKILDIRSNQLRRLPKSFPCLSKLSRLDLSRNKLRK-LPDAFGNLSALRVCN 189
Query: 230 LSYN 233
L N
Sbjct: 190 LGRN 193
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Query: 53 IHENAFPPTIRK---------LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLG 103
+HENA R+ L + N L L S L+ L+ L L+ N+L+ L G
Sbjct: 121 LHENALEKLPREFGALSSLKILDIRSNQLRRLPKSFPCLSKLSRLDLSRNKLRKLPDAFG 180
Query: 104 TLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LS L++ + +N L+ LP I + L L NN + L LT L ++ N+
Sbjct: 181 NLSALRVCNLGRNLLQELPEFIGMLESLEVLNLQNNALFKLAASFAELTNLSNLSLTGNR 240
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQI 188
I R + L L +++ NQ+
Sbjct: 241 IECFPRSQLGALKTLVTLTYAQNQL 265
>gi|428182138|gb|EKX51000.1| hypothetical protein GUITHDRAFT_66517, partial [Guillardia theta
CCMP2712]
Length = 344
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 4/128 (3%)
Query: 90 LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDI-QLFSQLGSLYANNNRITSLD-G 146
L N+L SL G L+ L L + N+L +LP+ I + LGSL N+N++TSL G
Sbjct: 2 LQQNQLVSLSLGVFANLTSLSFLDLSSNKLTSLPAGIFAGLTSLGSLSINSNQLTSLPAG 61
Query: 147 LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSL-SGLTKLAYLY 205
+ GLT L +++ NQ+T + F L +L S+S+ +NQ+TS+ + + +GLT L+ L
Sbjct: 62 IFAGLTSLWSLSINSNQLTSLPAGIFAGLTSLGSLSINSNQLTSLPAGIFAGLTSLSTLD 121
Query: 206 LSHNQLTE 213
LS N+LT
Sbjct: 122 LSSNKLTS 129
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 13/179 (7%)
Query: 70 NNLTSLNNSL-RGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDI-Q 126
N LTSL + GLT L L +N+N+L SL G L+ L L I NQL +LP+ I
Sbjct: 29 NKLTSLPAGIFAGLTSLGSLSINSNQLTSLPAGIFAGLTSLWSLSINSNQLTSLPAGIFA 88
Query: 127 LFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQIT--------MVRRDEFQNLHN 177
+ LGSL N+N++TSL G+ GLT L ++ N++T + F L +
Sbjct: 89 GLTSLGSLSINSNQLTSLPAGIFAGLTSLSTLDLSSNKLTSLPAGILASISAGAFAGLSS 148
Query: 178 LDSISLQNNQITSMNS-SLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L S+ L N++TS+ + + GL+ L YL LS+N+L L ++ T+ L N++
Sbjct: 149 LPSLDLSGNKLTSLPAGTFDGLSSLTYLSLSNNELASLPAGVFANLSKVTTLSLYSNQL 207
>gi|324500178|gb|ADY40092.1| Protein lap1 [Ascaris suum]
Length = 1428
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 2/179 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L V N L ++ S+ LT L L L +N L L ++G LS LQ L ++QN LEAL
Sbjct: 154 LRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEAL 213
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P I L L + N++ L + L +L + N + V +L L +
Sbjct: 214 PESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCL-QVLPTSVGHLKKLAIL 272
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+ N IT + ++ T L+ LYL+ N LTE + + LK LRT++L N++ + +
Sbjct: 273 KVDRNAITQLTPAVGSCTALSELYLTENLLTE-VPTSLGNLKALRTLNLDKNQLKEIPS 330
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N +T L ++ T L+ L+L N L + LG L L+ L +++NQL+ +PS
Sbjct: 272 LKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPST 331
Query: 125 IQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFN 162
I L L +N + L G L L L V N N
Sbjct: 332 IGGCISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLN 372
>gi|451339263|ref|ZP_21909782.1| small GTP-binding protein [Amycolatopsis azurea DSM 43854]
gi|449417985|gb|EMD23603.1| small GTP-binding protein [Amycolatopsis azurea DSM 43854]
Length = 238
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Query: 45 LVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
L +T + P ++ L + N LTS+ + L LT L L L NRL ++ +G
Sbjct: 7 LSGQGLTTLSGVPLPASLEYLDLYDNRLTSVPDDLWSLTGLRVLNLATNRLTTVSPSIGA 66
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGS-LYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
L +L L + N+L ALP +I S L LY ++N +T L L +L+ N+
Sbjct: 67 LRRLHTLDLGHNRLSALPDEIGELSGLTEYLYVSDNELTEFPVALCSLGRLKYLGCTDNR 126
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
I+ + D L +L + L N + + SL L+ L L+L N+LT L I L
Sbjct: 127 ISTLPED-LSGLASLRELRLYGNGLIEIPESLGTLSALRELHLRKNRLTS-LPSSIGDLS 184
Query: 224 RLRTVDLSYNKI 235
LR +DL N++
Sbjct: 185 ELRQLDLRENRL 196
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L N +++L L GL L L L N L + LGTLS L+ L + +N+L +L
Sbjct: 117 LKYLGCTDNRISTLPEDLSGLASLRELRLYGNGLIEIPESLGTLSALRELHLRKNRLTSL 176
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
PS I S+L L NR+ SL L GL+KL ++ +N+
Sbjct: 177 PSSIGDLSELRQLDLRENRLVSLPSTLAGLSKLDKLDLRWNK 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 34/169 (20%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L+V N LT +L L L +L +NR+ +L L L+ L+ L + N L +P
Sbjct: 97 LYVSDNELTEFPVALCSLGRLKYLGCTDNRISTLPEDLSGLASLRELRLYGNGLIEIPES 156
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
+ S L L+ NR+TSL +L L + L+
Sbjct: 157 LGTLSALRELHLRKNRLTSLP------------------------SSIGDLSELRQLDLR 192
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQ-------LTEFLLDDIRGLKRLR 226
N++ S+ S+L+GL+KL L L N+ L EF + RG LR
Sbjct: 193 ENRLVSLPSTLAGLSKLDKLDLRWNKDFREPPWLAEF---EARGCMVLR 238
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 32 DDLKGTPALITLLLVNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFL 90
+DL G +L L L N + I E+ +R+LH+ N LTSL +S+ L++L L L
Sbjct: 132 EDLSGLASLRELRLYGNGLIEIPESLGTLSALRELHLRKNRLTSLPSSIGDLSELRQLDL 191
Query: 91 NNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
NRL SL L LSKL L + N+ P + F G +
Sbjct: 192 RENRLVSLPSTLAGLSKLDKLDLRWNKDFREPPWLAEFEARGCM 235
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 46 VNNNITHIHEN-AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGT 104
+N I+ + E+ + ++R+L + N L + SL L+ L L L NRL SL +G
Sbjct: 123 TDNRISTLPEDLSGLASLRELRLYGNGLIEIPESLGTLSALRELHLRKNRLTSLPSSIGD 182
Query: 105 LSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
LS+L+ L + +N+L +LPS + S+L L
Sbjct: 183 LSELRQLDLRENRLVSLPSTLAGLSKLDKL 212
>gi|341940994|sp|Q80TH2.3|LAP2_MOUSE RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
AltName: Full=Erbb2-interacting protein; Short=Erbin
Length = 1402
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T + +
Sbjct: 194 NEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL L +N + + ++ L + L + NQL +L D I GL+ + +D S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLM-YLPDSIGGLRSIEELDCSFNEI 311
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N T + L L+ L +++ NRL + G +G+L +L L + +N +E +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMV 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
I L ++N + L + L + +D NQ+ M D L +++ +
Sbjct: 246 EEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQL-MYLPDSIGGLRSIEEL 304
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+I ++ SS+ LT + HN L + L +I K + + L NK+
Sbjct: 305 DCSFNEIEALPSSIGQLTNMRTFAADHNYLQQ-LPPEIGNWKNITVLFLHCNKL 357
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT F+ I L++L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLREFWMDGNRLT-FIPGFIGSLRQLTYLDVSKNNI 242
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ + + +L L++N L+ L +G+L + L I++NQL LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L + N I +L + LT ++ F D N + + E N N+ + L
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQL-PPEIGNWKNITVLFLH 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
N++ ++ + + KL + LS N+L
Sbjct: 354 CNKLETLPEEMGDMQKLKVINLSDNRL 380
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+I +L FN + +L +S+ LT++ ++N L+ L ++G + +L + N+LE
Sbjct: 300 SIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLET 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 402
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTE 198
>gi|417782200|ref|ZP_12429933.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
gi|410777793|gb|EKR62438.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 25/172 (14%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++ N LT+L + L L WL +++NRL L ++G L L+ L++ N L L
Sbjct: 118 LKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYGNSLTTL 177
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I + LY ++N++T+L +GL KLQ NL+ I
Sbjct: 178 PEEIGQLQKFERLYLHDNQLTTLP---QGLCKLQ---------------------NLEQI 213
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYN 233
L N++TS+ + L KL LYL N+LT L ++I L+ LR ++L N
Sbjct: 214 YLHQNRLTSLPQEIGQLGKLWTLYLYSNELTT-LPEEIGQLQNLRQLNLKLN 264
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 5/174 (2%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L++ LT L + +L L L++N+LK L ++G L LQ+L + N L
Sbjct: 46 PMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNL 105
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L + NR+T+L + L KL+ ++ N++T++ + E L NL
Sbjct: 106 INLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPK-EIGQLQNL 164
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSY 232
+ L N +T++ + L K LYL NQLT +GL +L+ ++ Y
Sbjct: 165 KELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTL----PQGLCKLQNLEQIY 214
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 40 LITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSL 98
L LLL N++T + E +L++ N LT+L L L +L ++L+ NRL SL
Sbjct: 164 LKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSL 223
Query: 99 EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
++G L KL L + N+L LP +I L L N +T+L + L KL +
Sbjct: 224 PQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQKLDNLD 283
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
+ NQ+T + + E L NL + L N + + + L L +L +
Sbjct: 284 LSDNQLTSIPK-EIGQLQNLRWLDLSGNPLVILPKEIGQLKNLYFLAMK 331
>gi|148686562|gb|EDL18509.1| Erbb2 interacting protein [Mus musculus]
gi|219519902|gb|AAI45510.1| Erbb2ip protein [Mus musculus]
Length = 1402
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T + +
Sbjct: 194 NEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL L +N + + ++ L + L + NQL +L D I GL+ + +D S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLM-YLPDSIGGLRSIEELDCSFNEI 311
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N T + L L+ L +++ NRL + G +G+L +L L + +N +E +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMV 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
I L ++N + L + L + +D NQ+ M D L +++ +
Sbjct: 246 EEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQL-MYLPDSIGGLRSIEEL 304
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+I ++ SS+ LT + HN L + L +I K + + L NK+
Sbjct: 305 DCSFNEIEALPSSIGQLTNMRTFAADHNYLQQ-LPPEIGNWKNITVLFLHCNKL 357
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT F+ I L++L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLREFWMDGNRLT-FIPGFIGSLRQLTYLDVSKNNI 242
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ + + +L L++N L+ L +G+L + L I++NQL LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L + N I +L + LT ++ F D N + + E N N+ + L
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQL-PPEIGNWKNITVLFLH 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
N++ ++ + + KL + LS N+L
Sbjct: 354 CNKLETLPEEMGDMQKLKVINLSDNRL 380
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+I +L FN + +L +S+ LT++ ++N L+ L ++G + +L + N+LE
Sbjct: 300 SIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLET 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 402
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTEV 199
>gi|256072891|ref|XP_002572767.1| shoc2 [Schistosoma mansoni]
gi|360043065|emb|CCD78477.1| putative shoc2 [Schistosoma mansoni]
Length = 532
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 58 FPPTIR-------KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
PP+IR +L++ N L +L N + L L L + N L L L ++L++
Sbjct: 117 LPPSIRDVAHHLKELYLYCNKLVNLPNEIGTLFALEILMVQENSLSDLPETLAQCTQLRV 176
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
L I N+L +P + L L+ NRI +D ++ LTKLQV ++ N+I + D
Sbjct: 177 LDIRHNKLCEIPQVVYKLHNLTHLFLRFNRIRVVDEEIKYLTKLQVLSLRENKIHTLPAD 236
Query: 171 E-FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVD 229
L NL ++ + +N + ++ + KL L L HN+L L + I LK L +
Sbjct: 237 PGIGQLTNLITLDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRS-LPNTIGDLKMLENIG 295
Query: 230 LSYNKI 235
L YN +
Sbjct: 296 LKYNHL 301
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 57 AFPPTIR------KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFPP I+ +L+VG N LT L + + L +L L L+NN+LK + + L KLQ+
Sbjct: 398 AFPPDIKSWTSLVELNVGTNQLTKLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQV 457
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L +E+N LE+LP DI +L L +NR+TSL
Sbjct: 458 LDLEENHLESLPPDIGYLGELQRLVVQSNRLTSL 491
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V N+L L+ + L L L +N L+SL +G L L+ + ++ N LE+LP
Sbjct: 248 LDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRSLPNTIGDLKMLENIGLKYNHLESLPDS 307
Query: 125 IQLFSQLGSLYANNNRITSL-DGLLRGLTK------------------------LQVFNM 159
+ L + L L N I L +GLL L K +Q NM
Sbjct: 308 LALCTNLLELNIEGNNIWQLPEGLLTHLKKVSCVTLSRNYFNIFPSGGPQQFTSIQSLNM 367
Query: 160 DFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDI 219
++NQIT + F NL +++++NQI + + T L L + NQLT+ L DDI
Sbjct: 368 EYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPPDIKSWTSLVELNVGTNQLTK-LPDDI 426
Query: 220 RGLKRLRTVDLSYNKINKF 238
L L + LS N++ +
Sbjct: 427 EYLINLEVLILSNNQLKQI 445
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSL-RGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
+I+ L++ +N +T + + ++L L + +N++ + + + + L L + NQL
Sbjct: 361 SIQSLNMEYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPPDIKSWTSLVELNVGTNQLT 420
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
LP DI+ L L +NN++ + +R L KLQV +++ N + + D L L
Sbjct: 421 KLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEENHLESLPPD-IGYLGELQ 479
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ +Q+N++TS+ + L L YL + N+L
Sbjct: 480 RLVVQSNRLTSLPREIGRLYNLIYLAVGENEL 511
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 26/192 (13%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQ 126
+N+L SL +SL T+L L + N + L EG L L K+ + + +N PS Q
Sbjct: 298 YNHLESLPDSLALCTNLLELNIEGNNIWQLPEGLLTHLKKVSCVTLSRNYFNIFPSGGPQ 357
Query: 127 LFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQI-----------TMVR------ 168
F+ + SL N+IT + G+ + L NM NQI ++V
Sbjct: 358 QFTSIQSLNMEYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPPDIKSWTSLVELNVGTN 417
Query: 169 -----RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLK 223
D+ + L NL+ + L NNQ+ + ++ L KL L L N L E L DI L
Sbjct: 418 QLTKLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEENHL-ESLPPDIGYLG 476
Query: 224 RLRTVDLSYNKI 235
L+ + + N++
Sbjct: 477 ELQRLVVQSNRL 488
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
KL++ N + + ++ T L L + N+L L + L L++L++ NQL+ +P
Sbjct: 388 KLNMKDNQIGAFPPDIKSWTSLVELNVGTNQLTKLPDDIEYLINLEVLILSNNQLKQIPV 447
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
I+ +L L N + SL + L +LQ + N++T + R E L+NL +++
Sbjct: 448 TIRELQKLQVLDLEENHLESLPPDIGYLGELQRLVVQSNRLTSLPR-EIGRLYNLIYLAV 506
Query: 184 QNNQITSM-NSSLSGLTKLAYLYL 206
N++ S+ N +S T L Y+
Sbjct: 507 GENELQSIPNEIVSTSTGLFQSYI 530
>gi|418745007|ref|ZP_13301349.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|418755666|ref|ZP_13311862.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409963871|gb|EKO31771.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|410794010|gb|EKR91923.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 304
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L++ N + L +L WL N NRLK L +LG L L +L + N+L+ L
Sbjct: 112 LKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELKVL 171
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
PS L SL N NR L L L++ + NQ+ + +E L L +
Sbjct: 172 PSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFL-PEEIGTLDKLRVL 230
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
L+ NQ+ + S + L L LYL NQLT L ++I L+ L+ +DL
Sbjct: 231 FLEGNQLKQIPSGIEKLQNLESLYLQENQLTT-LPEEIGFLQNLKELDL 278
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++L++G N +TSL + L +L L L++NRL SL ++G L L++L + +N++ L
Sbjct: 43 LKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLEILTLYRNRISVL 102
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDE-FQNLHNLDS 180
P L LY + N+ + L L+ +DFN+ + E L NL+
Sbjct: 103 PKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEW--LDFNENRLKELPERLGQLQNLNI 160
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++ + SS S L L L L++N+ F ++ LK L ++L+ N++
Sbjct: 161 LYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVF-PKELISLKNLEILELTGNQL 214
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + +L S ++ L +L L L N++ SL ++G L L+ L + N+L
Sbjct: 17 PNVVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRL 76
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
+LP +I L L NRI+ L L L++ + N+ +E L NL
Sbjct: 77 TSLPMEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKF-PEEILQLQNL 135
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ + N++ + L L L LYL N+L + L L+ L++++L+YN+ F
Sbjct: 136 EWLDFNENRLKELPERLGQLQNLNILYLLGNEL-KVLPSSFSELQSLKSLNLNYNRFQVF 194
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+++ L++ +N L L +L L L N+L L ++GTL KL++L +E NQL+
Sbjct: 180 SLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQ 239
Query: 121 LPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKL 154
+PS I+ L SLY N++T+L G L+ L +L
Sbjct: 240 IPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNLKEL 276
>gi|354474057|ref|XP_003499248.1| PREDICTED: protein LAP2 [Cricetulus griseus]
Length = 1448
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T + +
Sbjct: 194 NEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL L +N + + ++ L + L + NQL +L D I GL+ + +D S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQLM-YLPDSIGGLRSIEELDCSFNEI 311
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N T + L L+ L +++ NRL + G +G+L +L L + +N +E +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMV 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
I L ++N + L + L + +D NQ+ M D L +++ +
Sbjct: 246 EEGISTCENLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQL-MYLPDSIGGLRSIEEL 304
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+I ++ SS+ LT + HN L + L +I K + + L NK+
Sbjct: 305 DCSFNEIEALPSSVGQLTNIRTFAADHNFLQQ-LPPEIGNWKNITVLFLHSNKL 357
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPK-TMNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT F+ I L++L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLT-FIPGFIGSLRQLTYLDVSKNNI 242
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ + + +L L++N L+ L +G+L + L I++NQL LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L + N I +L + LT ++ F D N + + E N N+ + L
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAADHNFLQQL-PPEIGNWKNITVLFLH 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
+N++ ++ + + KL + LS N+L
Sbjct: 354 SNKLETLPEEMGDMQKLKVINLSDNRL 380
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+I +L FN + +L +S+ LT++ ++N L+ L ++G + +L + N+LE
Sbjct: 300 SIEELDCSFNEIEALPSSVGQLTNIRTFAADHNFLQQLPPEIGNWKNITVLFLHSNKLET 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 402
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTE 198
>gi|456889972|gb|EMG00842.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 290
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L G N LT+L + L +L+ L L N+ K+L ++G L L LL +E+N+ + L
Sbjct: 103 LKVLDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTL 162
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L ++N++ +L + L L+ N+ NQ+ M E NL NL +
Sbjct: 163 PKEIWNLQKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQL-MTLPKEIGNLQNLQEL 221
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+ ++ + L L L+LS NQL L +I L+ L+ + LS N++
Sbjct: 222 HLSGNQLMTLPKEIGNLQNLQELHLSGNQLM-TLPKEIGNLQNLQELHLSGNQL 274
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T+L +L+ D L+LN N LK+L ++G L L+ L + +N+L LP +I L
Sbjct: 45 TNLAKALQNPMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLK 104
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L + N +T+L + L L + +N+ + + E NL NL + L+ N+ ++
Sbjct: 105 VLDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPK-EIGNLQNLGLLDLEKNKFKTLP 163
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL L LSHN+L + L +I L+ LR ++LS N++
Sbjct: 164 KEIWNLQKLQVLNLSHNKL-KTLPKEIGELQNLRYLNLSDNQL 205
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P R L++ N L +L + L +L L L N+L++L ++G L L++L N+L
Sbjct: 54 PMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNEL 113
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L N+ +L + L L + +++ N+ + + E NL L
Sbjct: 114 TTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPK-EIWNLQKL 172
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +N++ ++ + L L YL LS NQL L +I L+ L+ + LS N++
Sbjct: 173 QVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLM-TLPKEIGNLQNLQELHLSGNQL 228
>gi|26325922|dbj|BAC26715.1| unnamed protein product [Mus musculus]
Length = 853
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 25 GSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLT 83
GS P +LK L +LL+ +N +T + F P I++LH+ N L +++ +
Sbjct: 310 GSLPKEVRELKN---LESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIENFK 366
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
+L L L+ N L+S+ ++ L+ L + N +E LP I+ L L+ N N++ +
Sbjct: 367 ELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMIT 426
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ + L+ + + NQIT V E +N + + L N I L L L Y
Sbjct: 427 MTEEISHLSNIHILEFSGNQITHVPI-EIKNCRKITRVELNYNNIMYFPVGLCALQSLDY 485
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
L + N ++E + D+ K+L ++L+ NK+ F
Sbjct: 486 LSFNGNYISEIPV-DMSFSKQLLHLELNRNKLTVFS 520
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Query: 57 AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
F P + L++ N + SL +R L +L L +++N+L L ++ L K++ L + N
Sbjct: 294 CFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADN 353
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+LEA+ I+ F +L L + N + S+ + L+ ++ N I + + + + L
Sbjct: 354 KLEAISPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPK-KIRKLK 412
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NL + + N++ +M +S L+ + L S NQ+T + +I+ +++ V+L+YN I
Sbjct: 413 NLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPI-EIKNCRKITRVELNYNNIM 471
Query: 237 KF 238
F
Sbjct: 472 YF 473
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L+S+ ++ +L L + N + + +L L ++ L++ N ++ LPS ++
Sbjct: 192 NGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLR 251
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L +L N +T + L L L++ N+++NQ+T+ + L L+S++L N I
Sbjct: 252 YLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKS-LCFLPKLNSLNLTGNMIG 310
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE 243
S+ + L L L + HN+LT FL +I L +++ + L+ NK+ + E
Sbjct: 311 SLPKEVRELKNLESLLMDHNKLT-FLAVEIFQLPKIKELHLADNKLEAISPKIE 363
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LT + +SL L +L L L N+L L L KL L + N + +LP +
Sbjct: 256 LSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKE 315
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
++ L SL ++N++T L + L K++ ++ N++ + + +N L ++L
Sbjct: 316 VRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAI-SPKIENFKELRLLNLD 374
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N + S+ +S L L LS N + E L IR LK LR + ++ NK+
Sbjct: 375 KNLLQSIPKKISHCVNLESLSLSDNNIEE-LPKKIRKLKNLRQLHVNRNKM 424
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N + ++ + + + L+ L L++N+ +S +L +L L++L I +N+L+ +P +
Sbjct: 532 LDLAKNQIMTIPSCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLE 591
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR--DEFQNLHNLDSIS 182
I ++ L+ +NN T+ L L+ N+ V R +E ++ L ++
Sbjct: 592 ISKLKRIQKLHLSNNIFTNFPVELCQRQTLEELNISQTSGKKVTRLPEEVSHMTQLKILN 651
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ NN I + ++ L L Y S+NQ+
Sbjct: 652 ISNNAIKDIPKNIGELRSLVSFYASNNQI 680
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 75/192 (39%), Gaps = 25/192 (13%)
Query: 47 NNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N IT E + I L N +T + ++ + + LN N + L L
Sbjct: 422 NKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQ 481
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
L L N + +P D+ QL L N N++T L LT
Sbjct: 482 SLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLT-------------- 527
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
NL+ + L NQI ++ S +S + L L LS N+ F ++ LK LR
Sbjct: 528 ----------NLEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESF-PKELCSLKNLR 576
Query: 227 TVDLSYNKINKF 238
+D+S NK+ K
Sbjct: 577 VLDISENKLQKI 588
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 26/146 (17%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGL----LRGLT--------------------K 153
L+ P DI + LY + N+I + G+ L GL
Sbjct: 147 LQEFPVDIVKVKYVKYLYLDKNQIKNFQGIDPGDLLGLEILSLQENGLSSIPLEIQLFHN 206
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L++ N +N+I+ + ++ Q L N+ + L +N I ++ S L L L L L N LT
Sbjct: 207 LKILNASYNEISQIPKELLQ-LENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLT- 264
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKFG 239
++ D + LK LR ++L YN++ F
Sbjct: 265 YIPDSLSSLKNLRILNLEYNQLTIFS 290
>gi|421092601|ref|ZP_15553333.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410364452|gb|EKP15473.1| leucine rich repeat protein [Leptospira borgpetersenii str.
200801926]
Length = 300
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ L G N LT+L + L +L+ L L N+ K+L ++G L L LL +E+N+ + L
Sbjct: 113 LKVLDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTL 172
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I +L L ++N++ +L + L L+ N+ NQ+ M E NL NL +
Sbjct: 173 PKEIWNLQKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQL-MTLPKEIGNLQNLQEL 231
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+ ++ + L L L+LS NQL L +I L+ L+ + LS N++
Sbjct: 232 HLSGNQLMTLPKEIGNLQNLQELHLSGNQLM-TLPKEIGNLQNLQELHLSGNQL 284
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T+L +L+ D L+LN N LK+L ++G L L+ L + +N+L LP +I L
Sbjct: 55 TNLAKALQNPMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLK 114
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L + N +T+L + L L + +N+ + + E NL NL + L+ N+ ++
Sbjct: 115 VLDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPK-EIGNLQNLGLLDLEKNKFKTLP 173
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L KL L LSHN+L + L +I L+ LR ++LS N++
Sbjct: 174 KEIWNLQKLQVLNLSHNKL-KTLPKEIGELQNLRYLNLSDNQL 215
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P R L++ N L +L + L +L L L N+L++L ++G L L++L N+L
Sbjct: 64 PMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNEL 123
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L N+ +L + L L + +++ N+ + + E NL L
Sbjct: 124 TTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPK-EIWNLQKL 182
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
++L +N++ ++ + L L YL LS NQL L +I L+ L+ + LS N++
Sbjct: 183 QVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLM-TLPKEIGNLQNLQELHLSGNQL 238
>gi|418676212|ref|ZP_13237496.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400323358|gb|EJO71208.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 313
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 67 VGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQ 126
+G + L SL + +L L L N+L +L ++G L KL++L + NQL +LP +++
Sbjct: 52 MGLHELDSLPRVIGLFQNLEKLNLVGNQLTTLPKEIGRLQKLRVLNLAHNQLTSLPKEME 111
Query: 127 LFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNN 186
L L L ++N TS R L KL++ N+ NQ+T + + E + L NL+ + L N
Sbjct: 112 LLQNLEILNLDDNEFTSFPKETRQLQKLRILNLADNQLTSLPK-EMELLQNLERLDLAGN 170
Query: 187 QITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ + + L L L L HNQ T F +IR + L+ + LS N++
Sbjct: 171 RFKILPKEMELLQNLEALNLGHNQFTSF-PKEIRRQQNLKWLYLSRNQL 218
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ N LTSL + L +L L L++N S + L KL++L + NQL +L
Sbjct: 93 LRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFTSFPKETRQLQKLRILNLADNQLTSL 152
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +++L L L NR L + L L+ N+ NQ T + E + NL +
Sbjct: 153 PKEMELLQNLERLDLAGNRFKILPKEMELLQNLEALNLGHNQFTSFPK-EIRRQQNLKWL 211
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L NQ+ +++ + L L L+L NQL+ + +I L+ L ++L NK+
Sbjct: 212 YLSRNQLKTLSKEIVELQNLQSLHLDGNQLSS-IPKEIGQLQNLFELNLQNNKL 264
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ L++G N TS +R +L WL+L+ N+LK+L ++ L LQ L ++ NQL ++
Sbjct: 185 LEALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSI 244
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNL 175
P +I L L NN++ +L + L LQV + N + + E Q L
Sbjct: 245 PKEIGQLQNLFELNLQNNKLKTLPKEIGLLQNLQVLRLYSNPFSFKEKQEIQKL 298
>gi|398341371|ref|ZP_10526074.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
1051]
Length = 287
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 57 AFPPTI------RKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
AFP I + L++ +N L +L ++ L +L WL L+ N L +L ++G L L+
Sbjct: 85 AFPKVIGQLKNLQSLNLTYNQLKNLPKEIKQLQNLQWLILDYNHLTTLPKEIGQLQNLRA 144
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLR--------------------- 149
L + NQL LP +I L LY +N++T+L +
Sbjct: 145 LYLFNNQLTTLPKEIGQLQNLQELYLRDNQLTTLPKEIGQLKNLQQLNLNNNRLTILPNE 204
Query: 150 --GLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLS 207
L LQ N+D NQ+T + + E L NL + L++NQ+T++ + L L LYL
Sbjct: 205 IGQLKNLQQLNLDANQLTTLSK-EIGQLKNLRELLLRHNQLTTIPKEIGQLQNLQELYLI 263
Query: 208 HNQLTEFLLDDIRGL 222
NQ + + IR L
Sbjct: 264 DNQFSSEEKERIRKL 278
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 75 LNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSL 134
L +++ D+ L LN +L +L ++G L L L +++N L A P I L SL
Sbjct: 40 LTEAIQNPLDVRVLDLNGQKLTTLPKEIGQLKNLYDLNLDENPLGAFPKVIGQLKNLQSL 99
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
N++ +L ++ L LQ +D+N +T + + E L NL ++ L NNQ+T++
Sbjct: 100 NLTYNQLKNLPKEIKQLQNLQWLILDYNHLTTLPK-EIGQLQNLRALYLFNNQLTTLPKE 158
Query: 195 LSGLTKLAYLYLSHNQLT 212
+ L L LYL NQLT
Sbjct: 159 IGQLQNLQELYLRDNQLT 176
>gi|398341357|ref|ZP_10526060.1| hypothetical protein LkirsB1_19560 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 251
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T L +L+ D+ L L+ +LK L ++ L LQ L++ Q +L LP ++ L
Sbjct: 34 TDLTKALQNYLDVRVLNLSEQKLKILPKEIEQLKNLQDLILSQQKLTTLPKEVGQLQNLQ 93
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
+L+ ++N++ +L + L L N+ NQ+T + + E + L NL + L +NQ+ +
Sbjct: 94 TLHLSDNKLKTLPKEIGQLKNLYELNLYANQLTTLPK-EIRQLQNLRVLGLSHNQLKILP 152
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+S L L LYLS NQL L +I L+ LR ++LS+N++
Sbjct: 153 KEISQLQNLEELYLSENQLVT-LSKEISQLQNLRVLELSHNQL 194
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+R L++ L L + L +L L L+ +L +L ++G L LQ L + N+L+ L
Sbjct: 46 VRVLNLSEQKLKILPKEIEQLKNLQDLILSQQKLTTLPKEVGQLQNLQTLHLSDNKLKTL 105
Query: 122 PSDIQLFSQLGSLYANN---NRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
P +I QL +LY N N++T+L +R L L+V + NQ+ ++ + E L NL
Sbjct: 106 PKEI---GQLKNLYELNLYANQLTTLPKEIRQLQNLRVLGLSHNQLKILPK-EISQLQNL 161
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
+ + L NQ+ +++ +S L L L LSHNQL
Sbjct: 162 EELYLSENQLVTLSKEISQLQNLRVLELSHNQLV 195
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
++ LH+ N L +L + L +L L L N+L +L ++ L L++L + NQL+ L
Sbjct: 92 LQTLHLSDNKLKTLPKEIGQLKNLYELNLYANQLTTLPKEIRQLQNLRVLGLSHNQLKIL 151
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRD 170
P +I L LY + N++ +L + L L+V + NQ+ + ++
Sbjct: 152 PKEISQLQNLEELYLSENQLVTLSKEISQLQNLRVLELSHNQLVTLPKE 200
>gi|417765366|ref|ZP_12413328.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400352303|gb|EJP04499.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 385
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+++LH+ FN LT L + L +L L L NRL L ++G L L +L + NQL L
Sbjct: 217 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTIL 276
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
P +I L L NR+T+L + L LQ ++ NQ+T + + E L L+S+
Sbjct: 277 PKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPK-EIGRLQKLESL 335
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
L +NQ+ ++ + L L LYL +N L ++ IR L
Sbjct: 336 GLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKL 376
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
Query: 61 TIRKLHVGFNN--LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
++RKL +G N T L + L +L L L NRL L ++G L L++L + QN+L
Sbjct: 191 SLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRL 250
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L + N++T L + L LQV ++ N++T + + E L NL
Sbjct: 251 TILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPK-EIGQLQNL 309
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L NQ+T++ + L KL L L HNQL L ++I+ LK L+ + L N +
Sbjct: 310 QKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLAT-LPEEIKQLKNLKKLYLHNNPL 365
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 73 TSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLG 132
T+L +L+ ++ L L+ ++LK L ++G L LQ+L E NQL LP +I L
Sbjct: 42 TNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQ 101
Query: 133 SLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMN 192
L+ NN++T+L + L L+V +++ NQ+T + +E L NL ++L N++ +
Sbjct: 102 ELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTL-PEEIGKLQNLQELNLFVNRLNILP 160
Query: 193 SSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDL 230
+ L L LYLS N+LT L ++I L+ LR + L
Sbjct: 161 KEIGRLQNLQELYLSLNRLT-ILPEEIGQLESLRKLSL 197
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 59 PPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL 118
P +R L + + L L + L +L L NN+L +L ++G L LQ L ++ NQL
Sbjct: 51 PNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQL 110
Query: 119 EALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNL 178
LP +I L L+ NNN++T+L + L LQ N+ N++ ++ + E L NL
Sbjct: 111 TTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPK-EIGRLQNL 169
Query: 179 DSISLQNNQITSMNSSLSGLTKLAYLYL-SHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L N++T + + L L L L N+ L +I L+ L+ + L +N++
Sbjct: 170 QELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRL 227
>gi|54607112|ref|NP_067538.2| protein LAP2 isoform 2 [Mus musculus]
Length = 1376
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 76 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTIVEASVNPISKLPDG 133
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS 193
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T + +
Sbjct: 194 NEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCE 253
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NL L +N + + ++ L + L + NQL +L D I GL+ + +D S+N+I
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLM-YLPDSIGGLRSIEELDCSFNEI 311
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEAL 121
+ +L +G N T + L L+ L +++ NRL + G +G+L +L L + +N +E +
Sbjct: 186 LERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMV 245
Query: 122 PSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSI 181
I L ++N + L + L + +D NQ+ M D L +++ +
Sbjct: 246 EEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQL-MYLPDSIGGLRSIEEL 304
Query: 182 SLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N+I ++ SS+ LT + HN L + L +I K + + L NK+
Sbjct: 305 DCSFNEIEALPSSIGQLTNMRTFAADHNYLQQ-LPPEIGNWKNITVLFLHCNKL 357
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 70 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ M+ + L L+
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKT-MNRLTQLER 188
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT F+ I L++L +D+S N I
Sbjct: 189 LDLGSNEFTEVPEVLEQLSGLREFWMDGNRLT-FIPGFIGSLRQLTYLDVSKNNI 242
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L V NN+ + + +L L++N L+ L +G+L + L I++NQL LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I + L + N I +L + LT ++ F D N + + E N N+ + L
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQL-PPEIGNWKNITVLFLH 353
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQL 211
N++ ++ + + KL + LS N+L
Sbjct: 354 CNKLETLPEEMGDMQKLKVINLSDNRL 380
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+I +L FN + +L +S+ LT++ ++N L+ L ++G + +L + N+LE
Sbjct: 300 SIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLET 359
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 402
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 48 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 107
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L + N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 108 PENIKNCKVLTIVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 166
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
L NQL + L + L +L +DL N+ +
Sbjct: 167 ELRENQL-KMLPKTMNRLTQLERLDLGSNEFTE 198
>gi|161086957|ref|NP_766467.2| leucine-rich repeat and death domain-containing protein 1 [Mus
musculus]
gi|341940918|sp|Q8C0R9.2|LRRD1_MOUSE RecName: Full=Leucine-rich repeat and death domain-containing
protein 1
gi|187954881|gb|AAI41027.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
gi|219520514|gb|AAI45171.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
Length = 853
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 25 GSHPLTSDDLKGTPALITLLLVNNNITHIHENAFP-PTIRKLHVGFNNLTSLNNSLRGLT 83
GS P +LK L +LL+ +N +T + F P I++LH+ N L +++ +
Sbjct: 310 GSLPKEVRELKN---LESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIENFK 366
Query: 84 DLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
+L L L+ N L+S+ ++ L+ L + N +E LP I+ L L+ N N++ +
Sbjct: 367 ELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMIT 426
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAY 203
+ + L+ + + NQIT V E +N + + L N I L L L Y
Sbjct: 427 MTEEISHLSNIHILEFSGNQITHVPI-EIKNCRKITRVELNYNNIMYFPVGLCALQSLDY 485
Query: 204 LYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFG 239
L + N ++E + D+ K+L ++L+ NK+ F
Sbjct: 486 LSFNGNYISEIPV-DMSFSKQLLHLELNRNKLTVFS 520
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Query: 57 AFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQN 116
F P + L++ N + SL +R L +L L +++N+L L ++ L K++ L + N
Sbjct: 294 CFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADN 353
Query: 117 QLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLH 176
+LEA+ I+ F +L L + N + S+ + L+ ++ N I + + + + L
Sbjct: 354 KLEAISPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPK-KIRKLK 412
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
NL + + N++ +M +S L+ + L S NQ+T + +I+ +++ V+L+YN I
Sbjct: 413 NLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPI-EIKNCRKITRVELNYNNIM 471
Query: 237 KF 238
F
Sbjct: 472 YF 473
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N L+S+ ++ +L L + N + + +L L ++ L++ N ++ LPS ++
Sbjct: 192 NGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLR 251
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L +L N +T + L L L++ N+++NQ+T+ + L L+S++L N I
Sbjct: 252 YLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKS-LCFLPKLNSLNLTGNMIG 310
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKFGTRNE 243
S+ + L L L + HN+LT FL +I L +++ + L+ NK+ + E
Sbjct: 311 SLPKEVRELKNLESLLMDHNKLT-FLAVEIFQLPKIKELHLADNKLEAISPKIE 363
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LT + +SL L +L L L N+L L L KL L + N + +LP +
Sbjct: 256 LSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKE 315
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
++ L SL ++N++T L + L K++ ++ N++ + + +N L ++L
Sbjct: 316 VRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAI-SPKIENFKELRLLNLD 374
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
N + S+ +S L L LS N + E L IR LK LR + ++ NK+
Sbjct: 375 KNLLQSIPKKISHCVNLESLSLSDNNIEE-LPKKIRKLKNLRQLHVNRNKM 424
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L + N + ++ + + + L+ L L++N+ +S +L +L L++L I +N+L+ +P +
Sbjct: 532 LDLAKNQIMTIPSCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLE 591
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRR--DEFQNLHNLDSIS 182
I ++ L +NN T+ L L L+ N+ + R +E ++ L ++
Sbjct: 592 ISKLKRIQKLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTRLPEEVSHMTQLKILN 651
Query: 183 LQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
+ NN I + ++ L L Y S+NQ+
Sbjct: 652 ISNNAIKDIPKNIGELRSLVSFYASNNQI 680
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 75/192 (39%), Gaps = 25/192 (13%)
Query: 47 NNNITHIHENAFPPTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLS 106
N IT E + I L N +T + ++ + + LN N + L L
Sbjct: 422 NKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQ 481
Query: 107 KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM 166
L L N + +P D+ QL L N N++T L LT
Sbjct: 482 SLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLT-------------- 527
Query: 167 VRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLR 226
NL+ + L NQI ++ S +S + L L LS N+ F ++ LK LR
Sbjct: 528 ----------NLEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESF-PKELCSLKNLR 576
Query: 227 TVDLSYNKINKF 238
+D+S NK+ K
Sbjct: 577 VLDISENKLQKI 588
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 26/146 (17%)
Query: 118 LEALPSDIQLFSQLGSLYANNNRITSLDGL----LRGLT--------------------K 153
L+ P DI + LY + N+I + G+ L GL
Sbjct: 147 LQEFPVDIVKVKYVKYLYLDKNQIKNFQGIDPGDLLGLEILSLQENGLSSIPLEIQLFHN 206
Query: 154 LQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTE 213
L++ N +N+I+ + ++ Q L N+ + L +N I ++ S L L L L L N LT
Sbjct: 207 LKILNASYNEISQIPKELLQ-LENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLT- 264
Query: 214 FLLDDIRGLKRLRTVDLSYNKINKFG 239
++ D + LK LR ++L YN++ F
Sbjct: 265 YIPDSLSSLKNLRILNLEYNQLTIFS 290
>gi|443691592|gb|ELT93406.1| hypothetical protein CAPTEDRAFT_215585 [Capitella teleta]
Length = 534
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L + +++T+L +S++ L+ L +FL N+ +L +LG L+ L L + +N L++LP
Sbjct: 57 RLDLCKSSITTLPSSIKELSQLTEIFLYGNKFVTLPPELGHLANLDTLALSENSLQSLPD 116
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+ +L L +N++ + ++ L L + FN+I +V D+ +NL NL +SL
Sbjct: 117 TLANLRRLRVLDLRHNKLCEVPNVVYSLASLTHLFLRFNRIKVV-EDDIRNLKNLTMLSL 175
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ N+I + S + L L+ +SHN L E L +++ ++ ++DL +N++
Sbjct: 176 RENKIKELPSGIGQLFNLSTFDVSHNHL-EHLPEELGQCVQMNSLDLQHNEL 226
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 64 KLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPS 123
+L++G N L ++ ++ L +L L L+NN LK L +G L KL+ L +E+N+LE+LP
Sbjct: 359 ELNLGTNQLMKISEDIKDLVNLEVLTLSNNSLKRLPATIGNLKKLRHLDLEENKLESLPQ 418
Query: 124 DIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+I +L L +N+ITSL + L+ LQ N +T + + E L NL+S+ +
Sbjct: 419 EIGFLKELTKLVVQSNQITSLPRAIGHLSNLQYLGAGENNLTNIPK-EIGTLENLESLYI 477
Query: 184 QNN 186
+N
Sbjct: 478 NDN 480
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 9/172 (5%)
Query: 69 FNNLTSLNNSLRGLTDLNWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQL 127
+N L S+ SL +++ + N + L EG L +L+KLQ + + +N + P +
Sbjct: 246 YNRLNSVPRSLSNCVNMDEFNVEGNNISQLPEGLLSSLTKLQSITLSRNAFASYP--VGG 303
Query: 128 FSQLGSLYANN---NRITSLD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISL 183
+Q S Y+ N N+I + G+ + L NM NQ++ + D N+ ++L
Sbjct: 304 PAQFCSAYSINLEHNQINKVPFGIFSQASCLTKLNMKDNQLSSLPLD-IGTWANMVELNL 362
Query: 184 QNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
NQ+ ++ + L L L LS+N L L I LK+LR +DL NK+
Sbjct: 363 GTNQLMKISEDIKDLVNLEVLTLSNNSLKR-LPATIGNLKKLRHLDLEENKL 413
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 28/177 (15%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ L + FN + + + +R L +L L L N++K L +G L L + N LE
Sbjct: 146 SLTHLFLRFNRIKVVEDDIRNLKNLTMLSLRENKIKELPSGIGQLFNLSTFDVSHNHLEH 205
Query: 121 LPSDIQLFSQLGSL-----------------------YANNNRITSLDGLLRGLTKLQVF 157
LP ++ Q+ SL NR+ S+ L + F
Sbjct: 206 LPEELGQCVQMNSLDLQHNELLDIPESIGNLTLLTRLGLRYNRLNSVPRSLSNCVNMDEF 265
Query: 158 NMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLY---LSHNQL 211
N++ N I+ + +L L SI+L N S + G + Y L HNQ+
Sbjct: 266 NVEGNNISQLPEGLLSSLTKLQSITLSRNAFASY--PVGGPAQFCSAYSINLEHNQI 320
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAFPPTI------RKLHVGFNNLTSLNNSLRGLTD 84
S+D+K L L L NN++ + P TI R L + N L SL + L +
Sbjct: 371 SEDIKDLVNLEVLTLSNNSLKRL-----PATIGNLKKLRHLDLEENKLESLPQEIGFLKE 425
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNR-ITS 143
L L + +N++ SL +G LS LQ L +N L +P +I L SLY N+N + +
Sbjct: 426 LTKLVVQSNQITSLPRAIGHLSNLQYLGAGENNLTNIPKEIGTLENLESLYINDNPNLHN 485
Query: 144 LDGLLRGLTKLQVFNMDFNQITMVRRD 170
L L + LQ+ +++ +T + +
Sbjct: 486 LPFELALCSNLQIMSIENCPLTQIPSE 512
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
+ KL++ N L+SL + ++ L L N+L + + L L++L + N L+
Sbjct: 333 CLTKLNMKDNQLSSLPLDIGTWANMVELNLGTNQLMKISEDIKDLVNLEVLTLSNNSLKR 392
Query: 121 LPSDIQLFSQLGSLYANNNRITSLD---GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHN 177
LP+ I +L L N++ SL G L+ LTKL V NQIT + R +L N
Sbjct: 393 LPATIGNLKKLRHLDLEENKLESLPQEIGFLKELTKLVV---QSNQITSLPR-AIGHLSN 448
Query: 178 LDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
L + N +T++ + L L LY++ N
Sbjct: 449 LQYLGAGENNLTNIPKEIGTLENLESLYINDN 480
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 115 QNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQN 174
++ + LPS I+ SQL ++ N+ +L L L L + N + + D N
Sbjct: 62 KSSITTLPSSIKELSQLTEIFLYGNKFVTLPPELGHLANLDTLALSENSLQSL-PDTLAN 120
Query: 175 LHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L L + L++N++ + + + L L +L+L N++ + + DDIR LK L + L NK
Sbjct: 121 LRRLRVLDLRHNKLCEVPNVVYSLASLTHLFLRFNRI-KVVEDDIRNLKNLTMLSLRENK 179
Query: 235 INKFGT 240
I + +
Sbjct: 180 IKELPS 185
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 101 QLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMD 160
Q L+KL + + NQL +LP DI ++ + L N++ + ++ L L+V +
Sbjct: 330 QASCLTKLNM---KDNQLSSLPLDIGTWANMVELNLGTNQLMKISEDIKDLVNLEVLTLS 386
Query: 161 FNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
N + + NL L + L+ N++ S+ + L +L L + NQ+T
Sbjct: 387 NNSLKRLPAT-IGNLKKLRHLDLEENKLESLPQEIGFLKELTKLVVQSNQITSL 439
>gi|375010927|ref|YP_004987915.1| Leucine Rich Repeat (LRR)-containing protein [Owenweeksia
hongkongensis DSM 17368]
gi|359346851|gb|AEV31270.1| Leucine Rich Repeat (LRR)-containing protein [Owenweeksia
hongkongensis DSM 17368]
Length = 302
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
NN+ S + S+ LT+L L + N LK++ ++ L KL+ L I +N++ +P ++
Sbjct: 73 NNMESWDKSIFTLTNLQTLNVKENSLKAIPKEIENLKKLEALDIAKNKVPEIPKEMGELQ 132
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
L L+A+ N + + L +LQV ++ NQ++ + EF +L NL ++ L NQ
Sbjct: 133 SLRLLHASFNNVVYISPALGTCEQLQVIDLSHNQLSAIPA-EFSSLKNLKTLQLGYNQFR 191
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
++ L L L+HN L F +++ LK L+ ++LS N++ +
Sbjct: 192 EFKGDWCNISSLEDLDLNHNYLRNF-PGEVKKLKSLKALNLSNNELTEL 239
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
L L++S L +L +L L N ++S + + TL+ LQ L +++N L+A+P +I+ +L
Sbjct: 52 LFQLDDSAEELKNLTFLNLMKNNMESWDKSIFTLTNLQTLNVKENSLKAIPKEIENLKKL 111
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
+L N++ + + L L++ + FN + + L I L +NQ++++
Sbjct: 112 EALDIAKNKVPEIPKEMGELQSLRLLHASFNNVVYI-SPALGTCEQLQVIDLSHNQLSAI 170
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ S L L L L +NQ EF D + L +DL++N + F
Sbjct: 171 PAEFSSLKNLKTLQLGYNQFREF-KGDWCNISSLEDLDLNHNYLRNF 216
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++R LH FNN+ ++ + LGT +LQ++ + NQL A
Sbjct: 133 SLRLLHASFNNVVYISPA-----------------------LGTCEQLQVIDLSHNQLSA 169
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
+P++ L +L N+ G ++ L+ +++ N + E + L +L +
Sbjct: 170 IPAEFSSLKNLKTLQLGYNQFREFKGDWCNISSLEDLDLNHNYLRNF-PGEVKKLKSLKA 228
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTV 228
++L NN++T + L L L L LS N LTE L +I LK LRT+
Sbjct: 229 LNLSNNELTELPEELCKLKDLEQLILSENALTE-LPRNIGRLKNLRTL 275
>gi|332025176|gb|EGI65356.1| Leucine-rich repeat-containing protein 57 [Acromyrmex echinatior]
Length = 238
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 60 PTIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLE 119
PT+R L + N+ T+L N + T L L ++NRL +L G LG L KL+ L NQ+
Sbjct: 38 PTLRTLDLSENSFTTLPNEIGDFTLLKQLNFSHNRLTALPGTLGALEKLEGLNCAANQIR 97
Query: 120 ALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLD 179
++PS + + L + ++N+I+ + GL L V ++ N +T+V D +LH ++
Sbjct: 98 SIPSSLGNLNHLKQVNLSDNQISDFPLMFCGLRHLDVLDLSKNWLTIV-PDAAADLHVIE 156
Query: 180 SISLQNNQITSMNSSLSGLTKLAYLYLSHNQL 211
++L NQI +++ L+ +L L L N L
Sbjct: 157 -LNLNQNQIATISEKLADCPRLKTLRLEENCL 187
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 108 LQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMV 167
L+ L + +N LP++I F+ L L ++NR+T+L G L L KL+ N NQI +
Sbjct: 40 LRTLDLSENSFTTLPNEIGDFTLLKQLNFSHNRLTALPGTLGALEKLEGLNCAANQIRSI 99
Query: 168 RRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLT 212
NL++L ++L +NQI+ GL L L LS N LT
Sbjct: 100 P-SSLGNLNHLKQVNLSDNQISDFPLMFCGLRHLDVLDLSKNWLT 143
>gi|432859633|ref|XP_004069190.1| PREDICTED: fibromodulin-like [Oryzias latipes]
Length = 347
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 34 LKGTPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNN 92
LKG L L L +NN+T I N P T+R L + N + ++ + L G+ +L L+L+N
Sbjct: 125 LKG---LERLYLHHNNLTSIPSN-LPRTLRDLRIDHNAIEKISAADLEGMDNLTILYLHN 180
Query: 93 NRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL-DGLLRGL 151
N ++ L L +L L LL I N+L +P D+ L + L LY N I SL +G L G
Sbjct: 181 NAVRDLGSSLTSLKSLALLDISGNKLTKVP-DV-LPASLHQLYLEYNSIDSLPEGFLGGF 238
Query: 152 TKLQVFNMDFNQIT--MVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHN 209
+ LQ M NQ++ + + F N+ L + L N++ + S S L +LYL N
Sbjct: 239 SHLQYIRMSHNQLSDKGIPSNTF-NVSGLVELDLSYNKLERIPSVSS---TLQHLYLQAN 294
Query: 210 QLTEFLLD------DIRGLKRLRTVDLSYNKIN 236
Q+ EF L D+ +L+T+ L N+I+
Sbjct: 295 QIKEFTLGSFCSIVDVVNFSKLQTLRLDGNEIS 327
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 58 FPPTIRKLHVGFNNLTSLNNS-LRGLTDLNWLFLNNNRLKSL---EGQLGTLSKLQLLVI 113
P I+ L++ N +TS+ S TDL WL ++ N+L S E L L+ L +
Sbjct: 74 IPSRIKFLYLQNNAITSVPESAFANATDLVWLLMHYNQLTSEGIDEKVFLRLKGLERLYL 133
Query: 114 EQNQLEALPS----------------------DIQLFSQLGSLYANNNRITSLDGLLRGL 151
N L ++PS D++ L LY +NN + L L L
Sbjct: 134 HHNNLTSIPSNLPRTLRDLRIDHNAIEKISAADLEGMDNLTILYLHNNAVRDLGSSLTSL 193
Query: 152 TKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKLAYLYLSHNQ 210
L + ++ N++T V +LH L L+ N I S+ L G + L Y+ +SHNQ
Sbjct: 194 KSLALLDISGNKLTKVPDVLPASLHQL---YLEYNSIDSLPEGFLGGFSHLQYIRMSHNQ 250
Query: 211 LTEFLLD----DIRGLKRLRTVDLSYNKINKFGT 240
L++ + ++ GL L DLSYNK+ + +
Sbjct: 251 LSDKGIPSNTFNVSGLVEL---DLSYNKLERIPS 281
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 80 RGLTDL-------NWLFLNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
RGLT + +L+L NN + S+ E + L L++ NQL + D ++F +L
Sbjct: 66 RGLTAIPFIPSRIKFLYLQNNAITSVPESAFANATDLVWLLMHYNQLTSEGIDEKVFLRL 125
Query: 132 GSL---YANNNRITSLDG-LLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQ 187
L Y ++N +TS+ L R L L++ D N I + + + + NL + L NN
Sbjct: 126 KGLERLYLHHNNLTSIPSNLPRTLRDLRI---DHNAIEKISAADLEGMDNLTILYLHNNA 182
Query: 188 ITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKIN 236
+ + SSL+ L LA L +S N+LT+ + D+ L + L YN I+
Sbjct: 183 VRDLGSSLTSLKSLALLDISGNKLTK--VPDVLP-ASLHQLYLEYNSID 228
>gi|291242572|ref|XP_002741180.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
Length = 308
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 29/210 (13%)
Query: 57 AFPPTIRKL------HVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQL 110
A P I KL ++ N + + +SL L L L++ N L ++ ++G L L +
Sbjct: 51 AIPDEISKLKNMKILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNI 110
Query: 111 LVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVR-- 168
L + N++ +P + QL LY ++ +T++ + L +++ +D N+I +
Sbjct: 111 LKLNNNKIAKIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDS 170
Query: 169 --------------------RDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSH 208
DE L ++ ++L++N+ + SL L +L L +
Sbjct: 171 LCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKS 230
Query: 209 NQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
N LT + D+I LK ++T++LS N I K
Sbjct: 231 NALTS-IPDEISKLKSMKTLNLSANTIEKI 259
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N LT + + +L L L++N+++ + L L +L L + N L A+P +I
Sbjct: 1 NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLK 60
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQIT 189
+ L ++N+I + L L +L M++N +T + DE L +L+ + L NN+I
Sbjct: 61 NMKILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAI-PDEIGKLKSLNILKLNNNKIA 119
Query: 190 SMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
+ SL L +L LY+ + LT + D I LK ++ + L N+I K
Sbjct: 120 KIPDSLCALEQLTELYMGSDALT-AIPDAIGKLKSMKILKLDENEIEKI 167
>gi|124008815|ref|ZP_01693503.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123985606|gb|EAY25491.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 614
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 48/220 (21%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQL-- 118
+++ L +G N LT + + LT L L ++ N++K L +LG LS L+ L I+QNQ+
Sbjct: 163 SLKSLDLGDNFLTEIPPEVGNLTLLEELNVSVNQIKHLPPELGRLSALKWLKIQQNQIVE 222
Query: 119 --------------------------------------------EALPSDIQLFSQLGSL 134
EALP ++ + L L
Sbjct: 223 LPETFDQLENLEELRLERNKFTQFPAALLKLPKLKKLYIFDNEIEALPPEVSQMTTLEHL 282
Query: 135 YANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS 194
+ N++ SL + L +L++ +++N+I + E L NL+ +SL++N++T +
Sbjct: 283 QMSGNQLKSLPSEIGSLPQLKIAYLEYNEIAEL-PPEISQLENLEYLSLEHNKLTGLPQG 341
Query: 195 LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNK 234
L L KL +L+L HN LTE L I +K L+ +D+ N+
Sbjct: 342 LEKLEKLEFLHLHHNNLTE-LPASIAQMKGLKELDVRNNE 380
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 72 LTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQL 131
LT L +L L L + +N L +L LG L KL+ +++N+L LP + +
Sbjct: 427 LTQLPKALEQTVLLTDLSMGDNELTTLPETLGNLVKLERFNVQKNKLGKLPDALGNCKAM 486
Query: 132 GSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM 191
L+ +N +T L ++ L LQ +D NQ+ M E ++L L ++L NNQ+T++
Sbjct: 487 KWLHVGSNALTELPTVIGELEDLQEVYLDNNQL-MALPKEIKDLKKLMVVNLANNQLTTL 545
Query: 192 NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINK 237
+ ++ + + YLYL++NQLT+ L + I L+ ++L N +++
Sbjct: 546 PTEITEIPYIQYLYLNNNQLTD-LPEGIENWVVLQELNLKGNPMSE 590
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L +G N LT+L +L L L + N+L L LG ++ L + N L LP+
Sbjct: 443 LSMGDNELTTLPETLGNLVKLERFNVQKNKLGKLPDALGNCKAMKWLHVGSNALTELPTV 502
Query: 125 IQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQ 184
I L +Y +NN++ +L ++ L KL V N+ NQ+T + E + + + L
Sbjct: 503 IGELEDLQEVYLDNNQLMALPKEIKDLKKLMVVNLANNQLTTLPT-EITEIPYIQYLYLN 561
Query: 185 NNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIR-GLKRLR 226
NNQ+T + + L L L N ++E IR L R R
Sbjct: 562 NNQLTDLPEGIENWVVLQELNLKGNPMSEATQQKIREKLPRTR 604
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ LHVG N LT L + L DL ++L+NN+L +L ++ L KL ++ + NQL
Sbjct: 485 AMKWLHVGSNALTELPTVIGELEDLQEVYLDNNQLMALPKEIKDLKKLMVVNLANNQLTT 544
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQIT 165
LP++I + LY NNN++T L + LQ N+ N ++
Sbjct: 545 LPTEITEIPYIQYLYLNNNQLTDLPEGIENWVVLQELNLKGNPMS 589
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 70 NNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFS 129
N + +L + +T L L ++ N+LKSL ++G+L +L++ +E N++ LP +I
Sbjct: 264 NEIEALPPEVSQMTTLEHLQMSGNQLKSLPSEIGSLPQLKIAYLEYNEIAELPPEISQLE 323
Query: 130 QLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITM---------------VRRDE--- 171
L L +N++T L L L KL+ ++ N +T VR +E
Sbjct: 324 NLEYLSLEHNKLTGLPQGLEKLEKLEFLHLHHNNLTELPASIAQMKGLKELDVRNNEGLD 383
Query: 172 ----FQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEF 214
F++L +++++ +Q Q +S+ L +L L LT+
Sbjct: 384 LANVFKSLEHIETVHVQAKQFSSIPVDADHWQYLPFLTLDQQGLTQL 430
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 25/200 (12%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNR-------LKSLE---------GQLGTLS-- 106
LH+ NNLT L S+ + L L + NN KSLE Q ++
Sbjct: 351 LHLHHNNLTELPASIAQMKGLKELDVRNNEGLDLANVFKSLEHIETVHVQAKQFSSIPVD 410
Query: 107 -----KLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDF 161
L L ++Q L LP ++ L L +N +T+L L L KL+ FN+
Sbjct: 411 ADHWQYLPFLTLDQQGLTQLPKALEQTVLLTDLSMGDNELTTLPETLGNLVKLERFNVQK 470
Query: 162 NQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRG 221
N++ + D N + + + +N +T + + + L L +YL +NQL L +I+
Sbjct: 471 NKLGKL-PDALGNCKAMKWLHVGSNALTELPTVIGELEDLQEVYLDNNQLMA-LPKEIKD 528
Query: 222 LKRLRTVDLSYNKINKFGTR 241
LK+L V+L+ N++ T
Sbjct: 529 LKKLMVVNLANNQLTTLPTE 548
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 23/193 (11%)
Query: 65 LHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSD 124
L++G N + LT L L L +N L + ++G L+ L+ L + NQ++ LP +
Sbjct: 144 LNLGKNGFHRFPDHFDKLTSLKSLDLGDNFLTEIPPEVGNLTLLEELNVSVNQIKHLPPE 203
Query: 125 IQLFSQLGSLYANNNRITSLDGLL----------RGLTKLQVFNMD------------FN 162
+ S L L N+I L K F F+
Sbjct: 204 LGRLSALKWLKIQQNQIVELPETFDQLENLEELRLERNKFTQFPAALLKLPKLKKLYIFD 263
Query: 163 QITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
E + L+ + + NQ+ S+ S + L +L YL +N++ E L +I L
Sbjct: 264 NEIEALPPEVSQMTTLEHLQMSGNQLKSLPSEIGSLPQLKIAYLEYNEIAE-LPPEISQL 322
Query: 223 KRLRTVDLSYNKI 235
+ L + L +NK+
Sbjct: 323 ENLEYLSLEHNKL 335
>gi|118103834|ref|XP_429138.2| PREDICTED: protein LAP2 [Gallus gallus]
Length = 1410
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 35/239 (14%)
Query: 29 LTSDDLKGTPA----LITLLLVNNNITHIHENAFPPTIRKLHV------GFNNLTSLNNS 78
L +DL PA LI L ++ + I E FP I+ V N ++ L +
Sbjct: 124 LPDNDLTTLPASIANLINLRELDVSKNGIQE--FPENIKNCKVLTVVEASVNPISKLPDG 181
Query: 79 LRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANN 138
L +L L+LN+ L+ L G L+KLQ+L + +NQL+ LP + +QL L +
Sbjct: 182 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGS 241
Query: 139 NRITSLDGLLRGLTKLQVFNMDFNQITMVR----------------------RDEFQNLH 176
N T + +L L+ L+ F MD N++T++ +
Sbjct: 242 NEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEIVEEGISGCE 301
Query: 177 NLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+L + L +N + + ++ L K+ L + NQL +L D I GL + +D S+N+I
Sbjct: 302 SLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLI-YLPDSIGGLVSVEELDCSFNEI 359
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 25/197 (12%)
Query: 62 IRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKL------------- 108
+ +L +G N T + L L+ L +++ NRL + G +GTL +L
Sbjct: 234 LERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEIV 293
Query: 109 ----------QLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFN 158
Q L++ N L+ LP I ++ +L + N++ L + GL ++ +
Sbjct: 294 EEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDSIGGLVSVEELD 353
Query: 159 MDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDD 218
FN+I + Q L N+ + + +N +T + + + L+L N+L EFL ++
Sbjct: 354 CSFNEIETLPSSVGQ-LSNIRTFAADHNFLTQLPPEIGNWKYITVLFLHSNKL-EFLPEE 411
Query: 219 IRGLKRLRTVDLSYNKI 235
+ +++L+ ++LS N++
Sbjct: 412 MGDMQKLKVINLSDNRL 428
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ KL + N+LT+L S+ L +L L ++ N ++ + L ++ N +
Sbjct: 118 SLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 177
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDS 180
LP L LY N+ + L LTKLQ+ + NQ+ ++ + L L+
Sbjct: 178 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKT-MSRLTQLER 236
Query: 181 ISLQNNQITSMNSSLSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
+ L +N+ T + L L+ L ++ N+LT + I LK+L +D+S N I
Sbjct: 237 LDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLT-LIPGFIGTLKQLTYLDVSKNNI 290
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 2/154 (1%)
Query: 85 LNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITSL 144
L L+L+ N+++ L QL L L + N L LP+ I L L + N I
Sbjct: 96 LEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEF 155
Query: 145 DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYL 204
++ L V N I+ + D F L NL + L + + + ++ LTKL L
Sbjct: 156 PENIKNCKVLTVVEASVNPISKL-PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQIL 214
Query: 205 YLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
L NQL + L + L +L +DL N+ +
Sbjct: 215 ELRENQL-KILPKTMSRLTQLERLDLGSNEFTEV 247
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 52/103 (50%)
Query: 61 TIRKLHVGFNNLTSLNNSLRGLTDLNWLFLNNNRLKSLEGQLGTLSKLQLLVIEQNQLEA 120
++ +L FN + +L +S+ L+++ ++N L L ++G + +L + N+LE
Sbjct: 348 SVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYITVLFLHSNKLEF 407
Query: 121 LPSDIQLFSQLGSLYANNNRITSLDGLLRGLTKLQVFNMDFNQ 163
LP ++ +L + ++NR+ +L L +L + NQ
Sbjct: 408 LPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQ 450
>gi|406875325|gb|EKD25129.1| hypothetical protein ACD_80C00114G0002 [uncultured bacterium (gcode
4)]
Length = 1767
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 112/234 (47%), Gaps = 31/234 (13%)
Query: 33 DLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDLNWLF 89
D P L +L L NN IT I F P + +L++G N +TS+++ LT L L+
Sbjct: 189 DFSWLPNLTSLYLANNLITSIESWDFSWLPNLTELYLGGNKITSISSGDFSELTGLQMLY 248
Query: 90 LNNNRLKSL-EGQLGTLSKLQLLVIEQNQLEALPSD-IQLFSQLGSLYANNNRITSLDG- 146
L+ N++ S+ G L LQ L I N L + +D L + L SL + N+ITSL+
Sbjct: 249 LDGNKIASVTSGDFSWLPLLQSLNISYNLLTWIDNDDFILLNALNSLDISFNQITSLESG 308
Query: 147 ---LLRGLTKLQ--------VFNMDF-------------NQITMVRRDEFQNLHNLDSIS 182
L LT LQ + N DF N IT + +F L L +
Sbjct: 309 DFNWLPSLTSLQLSSNQITWIENDDFFWIFGLQYLFLDDNLITWIDNGDFILLSGLQVLQ 368
Query: 183 LQNNQITSMNSS-LSGLTKLAYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKI 235
L +NQITS+ S S ++ L YLYL+ N +T D L L ++DLS N+I
Sbjct: 369 LSSNQITSIESGDFSWISGLQYLYLNGNLITWIDNGDFILLTALNSLDLSSNQI 422
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 31 SDDLKGTPALITLLLVNNNITHIHENAF--PPTIRKLHVGFNNLTSLN----NSLRGLTD 84
S D P LITL L +N IT I F P + L + N +TSL N L L
Sbjct: 999 SGDFNWLPGLITLSLRDNQITSIDNGDFYWPSNLENLSLDSNQITSLESWNFNWLDALIS 1058
Query: 85 LNWLFLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPSDIQLFSQLGSLYANNNRITS 143
L+ L +N++ SLE G L L L L + NQ+ ++ SD + S L SLY ++N+ITS
Sbjct: 1059 LS---LQSNQITSLESGDLNWLGVLTTLFLRNNQIASIESDDFIPSALESLYLDSNQITS 1115
Query: 144 LD-GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSG-LTKL 201
+D G L+ L +++ NQI + D F L NL ++SL +N + ++ S LT L
Sbjct: 1116 VDTGDFDLLSSLTTLSLESNQIASIGSDAFNWLSNLQTLSLLDNLLATLPESFPAVLTSL 1175
Query: 202 AYLYLSHNQLTEF 214
L + +N+L +
Sbjct: 1176 ESLSIDNNKLCTW 1188
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 37 TPALITLLLVNNNITHIHENAFPPTIRKLHVGFNNLTSL---NNSLRGLT--DLNWLF-- 89
T + T L + IT I N F G+ N+ +L +NS+ L D NWL
Sbjct: 574 TTWMSTCNLSSQGITGIALNTF--------TGYKNMVNLLLSSNSITSLESGDFNWLSKV 625
Query: 90 ----LNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITS 143
++NN++ ++ G LS L L + NQ+ ++ S D L +L+ N+N+ITS
Sbjct: 626 TLLQIDNNQITWIDSGDFFWLSGLTYLDLHTNQITSIESGDFFWLPNLDTLWLNDNQITS 685
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKL 201
+ G+ GL+ L + NQIT + F L NL S+ L NQIT +N+ L L
Sbjct: 686 IKSGVFLGLSSLITLELQINQITSLESGSFNWLDNLQSLLLAYNQITWINNGDFIWLPNL 745
Query: 202 AYLYLSHNQLTEFLLDDIRGLKRLRTVDLSYNKINKF 238
LYL +NQ+T F + D L L+ + L N + F
Sbjct: 746 IELYLYNNQITSFEVGDFSWLPNLQKLYLFDNLLTSF 782
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 32 DDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSL-NNSLRGLTDLNWL 88
DD AL +L + N IT + F P++ L + N +T + N+ + L +L
Sbjct: 284 DDFILLNALNSLDISFNQITSLESGDFNWLPSLTSLQLSSNQITWIENDDFFWIFGLQYL 343
Query: 89 FLNNNRLKSLE-GQLGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLD- 145
FL++N + ++ G LS LQ+L + NQ+ ++ S D S L LY N N IT +D
Sbjct: 344 FLDDNLITWIDNGDFILLSGLQVLQLSSNQITSIESGDFSWISGLQYLYLNGNLITWIDN 403
Query: 146 GLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYL 204
G LT L ++ NQIT + +F L N+ + L +N ITS+ N S L L L
Sbjct: 404 GDFILLTALNSLDLSSNQITSIESGDFSWLPNVWGVDLHSNLITSIENGDFSWLPSLNRL 463
Query: 205 YLSHNQLTE 213
+L+ N LT
Sbjct: 464 WLNSNLLTS 472
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 13/210 (6%)
Query: 41 ITLL-LVNNNITHIHENAFP--PTIRKLHVGFNNLTSLN----NSLRGLTDLNWLFLNNN 93
+TLL + NN+I I NAF P ++ L + +N +TSL N L LTDLN L+NN
Sbjct: 936 VTLLEIYNNSIASIWSNAFVWLPNLQTLALQYNLITSLESDDFNWLDNLTDLN---LSNN 992
Query: 94 RLKSLE-GQLGTLSKLQLLVIEQNQLEALP-SDIQLFSQLGSLYANNNRITSLDGL-LRG 150
+ S+E G L L L + NQ+ ++ D S L +L ++N+ITSL+
Sbjct: 993 LVVSIESGDFNWLPGLITLSLRDNQITSIDNGDFYWPSNLENLSLDSNQITSLESWNFNW 1052
Query: 151 LTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSSLSGLTKLAYLYLSHNQ 210
L L ++ NQIT + + L L ++ L+NNQI S+ S + L LYL NQ
Sbjct: 1053 LDALISLSLQSNQITSLESGDLNWLGVLTTLFLRNNQIASIESDDFIPSALESLYLDSNQ 1112
Query: 211 LTEFLLDDIRGLKRLRTVDLSYNKINKFGT 240
+T D L L T+ L N+I G+
Sbjct: 1113 ITSVDTGDFDLLSSLTTLSLESNQIASIGS 1142
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 29 LTSDDLKGTPALITLLLVNNNITHIHENAFP--PTIRKLHVGFNNLTSLNNS-LRGLTDL 85
L S D P L L + IT I F P + L + ++ +TS+ N L +L
Sbjct: 137 LESGDFNWLPNLTNLGMGYQLITSIESGDFMLLPNLTYLSLWWDKITSIENGDFSWLPNL 196
Query: 86 NWLFLNNNRLKSLEGQ-LGTLSKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITS 143
L+L NN + S+E L L L + N++ ++ S D + L LY + N+I S
Sbjct: 197 TSLYLANNLITSIESWDFSWLPNLTELYLGGNKITSISSGDFSELTGLQMLYLDGNKIAS 256
Query: 144 L-DGLLRGLTKLQVFNMDFNQITMVRRDEFQNLHNLDSISLQNNQITSMNSS-LSGLTKL 201
+ G L LQ N+ +N +T + D+F L+ L+S+ + NQITS+ S + L L
Sbjct: 257 VTSGDFSWLPLLQSLNISYNLLTWIDNDDFILLNALNSLDISFNQITSLESGDFNWLPSL 316
Query: 202 AYLYLSHNQLTEFLLDD---IRGLKRL 225
L LS NQ+T DD I GL+ L
Sbjct: 317 TSLQLSSNQITWIENDDFFWIFGLQYL 343
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 106 SKLQLLVIEQNQLEALPS-DIQLFSQLGSLYANNNRITSLD-GLLRGLTKLQVFNMDFNQ 163
+ LQ L N + ++ S D S L LY + N I SL+ G L L M +
Sbjct: 98 TSLQSLQFYNNPISSIESGDFNWLSSLTQLYFDTNNIASLESGDFNWLPNLTNLGMGYQL 157
Query: 164 ITMVRRDEFQNLHNLDSISLQNNQITSM-NSSLSGLTKLAYLYLSHNQLTEFLLDDIRGL 222
IT + +F L NL +SL ++ITS+ N S L L LYL++N +T D L
Sbjct: 158 ITSIESGDFMLLPNLTYLSLWWDKITSIENGDFSWLPNLTSLYLANNLITSIESWDFSWL 217
Query: 223 KRLRTVDLSYNKI 235
L + L NKI
Sbjct: 218 PNLTELYLGGNKI 230
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,616,183,877
Number of Sequences: 23463169
Number of extensions: 142965836
Number of successful extensions: 669425
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9407
Number of HSP's successfully gapped in prelim test: 24352
Number of HSP's that attempted gapping in prelim test: 437796
Number of HSP's gapped (non-prelim): 135203
length of query: 245
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 106
effective length of database: 9,097,814,876
effective search space: 964368376856
effective search space used: 964368376856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)