Diaphorina citri psyllid: psy425

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
MKSYDITSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDGYIDSPHNFGTNSIVERPSYVSSCSIWYLVICLGKGSKSIFQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK
ccccccccHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccECcccccccccHHHHHHHHHccHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccccccccEEECccccHHHHHHHHHHHccccEEEEECccHHHHHHHHHHHHHHccccccccccEEEEEccccccccccccccEEEEccccccccHHHHHHHHcccc
******TSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDGYIDSPHNFGTNSIVERPSYVSSCSIWYLVICLGKGSKSIFQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQK*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKSYDITSNQQFIQYLKENNFAQDERVLEAIQWVDRDRFAKDGYIDSPHNFGTNSIVERPSYVSSCSIWYLVICLGKGSKSIFQTYGIVSGNKGIHFLPFYQFYLISHLREVGMGPSSALSAKASHSLSGRPDQVLRRPQAACLQHLSDKLLPGANVLDLGFGSGFMSCCMARMVGDKGHVTAVDHIPQLINLFMTKLKISYPKLYKLYKIMDVVEWDARKPYKKNGPYDVIHFGSGVKHIPIEVSKLCRSQKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0071704 [BP]organic substance metabolic processprobableGO:0008150, GO:0008152
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0044238 [BP]primary metabolic processprobableGO:0008150, GO:0008152
GO:0044237 [BP]cellular metabolic processprobableGO:0009987, GO:0008150, GO:0008152

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1I1N, chain A
Confidence level:very confident
Coverage over the Query: 2-57,121-125,140-250
View the alignment between query and template
View the model in PyMOL