BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4272
(575 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157278072|ref|NP_001098136.1| HOXA9A [Oryzias latipes]
gi|6252950|dbj|BAA86255.1| HOXA9A [Oryzias latipes]
Length = 267
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Query: 282 DSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKE 341
D LS++ D+ +++ KP ++ SN +H + T + R Y+ HQI+ELEKE
Sbjct: 163 DELSAQADVSADVSAEGEEKPGLDPNNPVSNWLHASA----TRKKRCPYTKHQILELEKE 218
Query: 342 FRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
F YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 219 FLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 261
>gi|312384143|gb|EFR28942.1| hypothetical protein AND_02492 [Anopheles darlingi]
Length = 481
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 264 ILLAHLQQVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNT 323
I L+HL Q G S S KD+ S L S P+ P S N +
Sbjct: 159 IALSHLTQPATPRFDGVSTPPLSPKDLESALSSS--PRLPEESGKWTQNGDADERAKETA 216
Query: 324 GRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR--- 380
R RQ YS HQ +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 217 KRTRQSYSRHQTLELEKEFHFNRYLTRRRRIEIANSLNLTERQIKIWFQNRRMKAKKDYQ 276
Query: 381 ---THPDMVVE 388
T PD+ E
Sbjct: 277 STSTTPDLAFE 287
>gi|301128888|emb|CBL59351.1| HoxB4 [Scyliorhinus canicula]
Length = 241
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 256 EEPNKTSSILLAHLQQVQKDLG-LGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQ- 313
E+P + S L +QV G + + L + D + +S P PPPS S +SNQ
Sbjct: 56 EQPYSSCSNLQGSGEQVVAPRGHVQSQTGLQNHLDKHGHQSVSLTPSPPPSCSQNFSNQN 115
Query: 314 ---------------IHKNLLQCNTG-----RFRQVYSSHQIVELEKEFRLTNYLPSDRR 353
+H N++ N R R Y+ Q++ELEKEF YL RR
Sbjct: 116 TPCSKEPVVYPWMKKLHINVVNPNYKGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRR 175
Query: 354 KVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 176 VEIAHSLCLSERQIKIWFQNRRMKWKKDH 204
>gi|221119570|ref|XP_002163407.1| PREDICTED: homeobox protein Hox-B5-like [Hydra magnipapillata]
Length = 250
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 279 GASDSLSSEKDIPSNLDLSQIPKPPPSSSHTY----SNQIHKNLLQ---------C---N 322
G +S S D+ + Q PS SH Y S+ + + +Q C +
Sbjct: 108 GYYNSSCSVNDVCNQWSYGQPASILPSYSHGYGGLNSSYQYPDFIQPSVNGVPWMCREFD 167
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+ R R YS HQ++ELEKEF ++L +RR LSK+L L+ERQIKIWFQNRRMK K+
Sbjct: 168 SKRKRMTYSRHQLLELEKEFHFNHFLKKERRTELSKKLNLSERQIKIWFQNRRMKFKK-- 225
Query: 383 PDMVVEYVKESSEARSASQKTN 404
+M+ + +SS S++ KT+
Sbjct: 226 -EMLKGTINDSSIENSSTLKTD 246
>gi|410911106|ref|XP_003969031.1| PREDICTED: homeobox protein Hox-A9a-like isoform 2 [Takifugu
rubripes]
Length = 279
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 309 TYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIK 368
TY+N + L T + R Y+ HQI+ELEKEF YL DRR +++ L LTERQ+K
Sbjct: 198 TYNNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVK 257
Query: 369 IWFQNRRMKLKRTHPD 384
IWFQNRRMK+K+ + D
Sbjct: 258 IWFQNRRMKMKKFNKD 273
>gi|385654455|gb|AFI61959.1| Hox-A9a [Anguilla japonica]
Length = 257
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
SN +H + +T + R YS HQI+ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 183 SNWLHAS----STRKKRCPYSKHQILELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 238
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+T D
Sbjct: 239 FQNRRMKMKKTSKD 252
>gi|213511602|ref|NP_001133044.1| homeobox protein Hox-A9b [Salmo salar]
gi|157816077|gb|ABV82057.1| homeobox protein HoxA9b [Salmo salar]
gi|158702256|gb|ABW77459.1| homeobox protein HoxA9b [Salmo salar]
Length = 263
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
+N N L + R ++ YS HQI+ELEKEF YLP DRR +++ L LTERQIKI
Sbjct: 184 TNDPSSNWLHAKSSRKKRCPYSKHQILELEKEFLFNMYLPRDRRYEVARVLHLTERQIKI 243
Query: 370 WFQNRRMKLKRTHPD 384
WFQNRRMK+K+ + D
Sbjct: 244 WFQNRRMKMKKGNKD 258
>gi|165873657|gb|ABY67953.1| proboscipedia hox protein [Capitella teleta]
Length = 238
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 276 LGLGASDSLSS-EKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQ 334
+ LGASD + +DI S+ L+ PPP+S + + N + R R Y++ Q
Sbjct: 82 INLGASDFPEAMTQDITSSGLLTSGVAPPPTSCGNTGSSVASNHPR----RLRTAYTNTQ 137
Query: 335 IVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++ELEKEF YL RR ++ L LTERQ+K+WFQNRRMK KR
Sbjct: 138 LLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKFKR 183
>gi|332692469|gb|AEE90151.1| Homeobox A9a [Anguilla anguilla]
Length = 257
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
SN +H + +T + R YS HQI+ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 183 SNWLHAS----STRKKRCPYSKHQILELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 238
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+T D
Sbjct: 239 FQNRRMKMKKTSKD 252
>gi|255742444|gb|ACU32558.1| homeobox protein HoxB4 [Callorhinchus milii]
Length = 243
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 23/120 (19%)
Query: 300 PKPPPSSSHTYSNQ----------------IHKNLLQ--CNTG---RFRQVYSSHQIVEL 338
P PPPS S SNQ +H N++ C G R R Y+ Q++EL
Sbjct: 102 PSPPPSCSQVTSNQNTSCSKEPVVYPWMKKVHINIVNPNCKGGEMKRSRTAYTRQQVLEL 161
Query: 339 EKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH--PDMVVEYVKESSEA 396
EKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H P+ + SS A
Sbjct: 162 EKEFHFNRYLTRRRRVEIAHNLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSTTGSSTA 221
>gi|395756654|ref|XP_002834345.2| PREDICTED: homeobox protein Hox-A7-like [Pongo abelii]
Length = 224
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 7/103 (6%)
Query: 278 LGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVE 337
LG + SL S + S+ S PK P++S S H++L+Q RQ YS +Q +E
Sbjct: 53 LGPAGSLPSIRQTCSSNRYSHPPKITPAAS---SPLPHRDLVQGG----RQTYSRYQTLE 105
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
LEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 106 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 148
>gi|38016607|gb|AAR07637.1| transcription factor Hox6 [Ptychodera flava]
Length = 239
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 237 YKETENTQFNSETNDLSKLEEPNKTSSILLAHLQQVQKDLGLGASDSLSSEKDIPSNLDL 296
Y E N + + + L S L+ Q KD +DSL EKD +
Sbjct: 77 YSEANNNTYTNRS-----LAHSGSLSPYALSCNSQGNKDSVEAHADSLKKEKDASDDGGK 131
Query: 297 SQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVL 356
S P S+ Y + R RQ Y+ +Q +ELEKEF YL RR +
Sbjct: 132 SSTVIYPWMRSNNYCGSDQR--------RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 183
Query: 357 SKELGLTERQIKIWFQNRRMKLKR 380
+ LGLTERQIKIWFQNRRMK K+
Sbjct: 184 AHALGLTERQIKIWFQNRRMKWKK 207
>gi|158702218|gb|ABW77440.1| homeobox protein HoxA9aa [Salmo salar]
Length = 271
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 307 SHTYS--NQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTE 364
SH+ S N + L T + R Y+ HQI+ELEKEF YL DRR ++++L LTE
Sbjct: 185 SHSLSPDNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARQLNLTE 244
Query: 365 RQIKIWFQNRRMKLKRTHPD 384
RQ+KIWFQNRRMK+K+ + D
Sbjct: 245 RQVKIWFQNRRMKMKKCNKD 264
>gi|123319|sp|P09080.3|HMB1_TRIGR RecName: Full=Homeobox protein HB1; AltName: Full=TGHBOX1
gi|829232|emb|CAA32660.1| TgHbox1 protein [Tripneustes gratilla]
Length = 307
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 280 ASDSLSSEKDIPSNLDLSQIPKPPPSSS-HTYSNQIHKNL-LQCNTGRFRQVYSSHQIVE 337
+ L S P+N SQ+ P S+S + + N+ L+ R RQ Y+ +Q +E
Sbjct: 144 GTGCLVSAAAEPNNNHCSQVMSPCKSTSGYPWMPVAGPNVGLEVGRKRCRQTYTRYQTLE 203
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
LEKEF YL RR LS LGLTERQIKIWFQNRRMK K+
Sbjct: 204 LEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKK 246
>gi|259053107|emb|CAX11340.1| ultrabithorax [Parasteatoda tepidariorum]
Length = 265
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 15/143 (10%)
Query: 283 SLSSEKDIP--SNLDLSQIPKPPPSSSHTYSNQIHKNL-LQCNTG---RFRQVYSSHQIV 336
S +SE + +N Q + P+ T SN + + +Q G R RQ Y+ +Q +
Sbjct: 106 SFASENSVTPRANESWQQCCQSSPTIGQTQSNTFYPWMAVQGPNGMRRRGRQTYTRYQTL 165
Query: 337 ELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEA 396
ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+ ++ +KE SE
Sbjct: 166 ELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE-----IQAIKELSEQ 220
Query: 397 RSASQKTNHQSAPADTSAPNTHM 419
SQ Q+ T + N++M
Sbjct: 221 ERQSQ----QAKATTTVSTNSNM 239
>gi|88604730|gb|ABD46736.1| homeobox protein abdominalA [Nymphon gracile]
Length = 228
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 42/54 (77%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ Y+ Q +ELEKEFR NYL S RR+ LS L L+ERQIKIWFQNRRMK+KR
Sbjct: 153 RQTYTRFQTLELEKEFRFNNYLTSRRRQDLSGMLELSERQIKIWFQNRRMKMKR 206
>gi|14916603|sp|Q9PWD5.1|HXA9_MORSA RecName: Full=Homeobox protein Hox-A9
gi|5669602|gb|AAD46396.1|AF089743_2 homeodomain protein Hox-A9 [Morone saxatilis]
Length = 269
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 266 LAHLQQVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGR 325
+A V+KD G + +S E + LD S+ + P SN +H + T +
Sbjct: 154 VATASPVEKDTLSGQAGDVSGEAEEKPGLDPSKSLQNNP-----VSNWLHASA----TRK 204
Query: 326 FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R Y+ HQI+ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 205 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 263
>gi|165873661|gb|ABY67955.1| deformed hox protein [Capitella teleta]
Length = 180
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 304 PSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLS 357
P+ + + ++H N G R R Y+ HQI+ELEKEF YL RR ++
Sbjct: 49 PTIIYPWMKKVHMGTATANGGFVGDSKRTRTAYTRHQILELEKEFHFNRYLTRRRRIEIA 108
Query: 358 KELGLTERQIKIWFQNRRMKLKRTH--PDM---VVEYVKESSEARSASQKTNHQSAPA 410
L L+ERQIKIWFQNRRMK K+ H P+ + + V S E S + + SAP+
Sbjct: 109 HTLCLSERQIKIWFQNRRMKWKKEHKLPNTKTRLTDSVTASEETSSTIKDSFESSAPS 166
>gi|348533882|ref|XP_003454433.1| PREDICTED: homeobox protein Hox-A9b-like isoform 1 [Oreochromis
niloticus]
Length = 250
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 46/62 (74%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
T + R Y+ HQI+ELEKEF YLP DRR +++ L LTERQ+KIWFQNRRMK+K+ +
Sbjct: 184 TRKKRCPYTKHQILELEKEFLFNMYLPRDRRYEIARLLNLTERQVKIWFQNRRMKMKKEN 243
Query: 383 PD 384
D
Sbjct: 244 KD 245
>gi|348533884|ref|XP_003454434.1| PREDICTED: homeobox protein Hox-A9b-like isoform 2 [Oreochromis
niloticus]
Length = 253
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R Y+ HQI+ELEKEF YLP DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 191 RCPYTKHQILELEKEFLFNMYLPRDRRYEIARLLNLTERQVKIWFQNRRMKMKKENKD 248
>gi|157278070|ref|NP_001098135.1| hoxa9b protein [Oryzias latipes]
gi|6252935|dbj|BAA86254.1| HOXA9B [Oryzias latipes]
Length = 249
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R Y+ HQI+ELEKEF YLP DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 187 RCPYTKHQILELEKEFLFNMYLPRDRRYEVARLLNLTERQVKIWFQNRRMKMKKENKD 244
>gi|194899127|ref|XP_001979114.1| GG10258 [Drosophila erecta]
gi|190650817|gb|EDV48072.1| GG10258 [Drosophila erecta]
Length = 252
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
R R +SSHQ++ELE+EF L YL RR +S+ L LTERQ+KIWFQNRRMKLK++
Sbjct: 45 RSRTAFSSHQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKS 101
>gi|154183801|gb|ABS70743.1| Hoxa9b [Haplochromis burtoni]
Length = 250
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R Y+ HQI+ELEKEF YLP DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 188 RCPYTKHQILELEKEFLFNMYLPRDRRYEIARLLNLTERQVKIWFQNRRMKMKKENKD 245
>gi|74267523|dbj|BAE44260.1| hoxA9b [Oryzias latipes]
gi|83016939|dbj|BAE53469.1| hoxA9b [Oryzias latipes]
Length = 247
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQI+ELEKEF YLP DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 188 YTKHQILELEKEFLFNMYLPRDRRYEVARLLNLTERQVKIWFQNRRMKMKKENKD 242
>gi|213515310|ref|NP_001133038.1| homeobox protein HoxA9ab [Salmo salar]
gi|157816059|gb|ABV82048.1| homeobox protein HoxA9ab [Salmo salar]
gi|158702238|gb|ABW77450.1| homeobox protein HoxA9ab [Salmo salar]
Length = 267
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
SN +H + T + R YS HQI+ELEKEF YL DRR ++++L LTERQ+KIW
Sbjct: 191 SNWLHASA----TRKKRCPYSKHQILELEKEFLFNTYLTRDRRFEVARQLNLTERQVKIW 246
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 247 FQNRRMKMKKFNKD 260
>gi|426227774|ref|XP_004007990.1| PREDICTED: homeobox protein Hox-A9 [Ovis aries]
Length = 272
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|432865298|ref|XP_004070514.1| PREDICTED: homeobox protein Hox-C10a-like isoform 2 [Oryzias
latipes]
Length = 314
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHK---NLLQCNTGRFRQV-YSSHQIVEL 338
S S+++ PSN + Q K + + +Y + + K + L+ +GR ++ Y+ HQ +EL
Sbjct: 196 STSAQETAPSNTEERQSRKEEKAKTSSYDSPVEKTTESWLKAKSGRKKRCPYTKHQTLEL 255
Query: 339 EKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
EKEF YL +RR +S+ + LT+RQ+KIWFQNRRMKLK+
Sbjct: 256 EKEFLFNMYLSRERRLEISRSINLTDRQVKIWFQNRRMKLKK 297
>gi|332801060|ref|NP_001099087.2| homeobox protein Hox-A9 [Bos taurus]
Length = 272
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|195344055|ref|XP_002038606.1| GM10529 [Drosophila sechellia]
gi|194133627|gb|EDW55143.1| GM10529 [Drosophila sechellia]
Length = 252
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
R R +SSHQ++ELE+EF L YL RR +S+ L LTERQ+KIWFQNRRMKLK++
Sbjct: 45 RSRTAFSSHQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKS 101
>gi|443689506|gb|ELT91880.1| hypothetical protein CAPTEDRAFT_149640 [Capitella teleta]
Length = 254
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 304 PSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLS 357
P+ + + ++H N G R R Y+ HQI+ELEKEF YL RR ++
Sbjct: 123 PTIIYPWMKKVHMGTATANGGFVGDSKRTRTAYTRHQILELEKEFHFNRYLTRRRRIEIA 182
Query: 358 KELGLTERQIKIWFQNRRMKLKRTH--PDM---VVEYVKESSEARSASQKTNHQSAPA 410
L L+ERQIKIWFQNRRMK K+ H P+ + + V S E S + + SAP+
Sbjct: 183 HTLCLSERQIKIWFQNRRMKWKKEHKLPNTKTRLTDSVTASEETSSTIKDSFESSAPS 240
>gi|157104293|ref|XP_001648340.1| hypothetical protein AaeL_AAEL014277 [Aedes aegypti]
gi|108869224|gb|EAT33449.1| AAEL014277-PA [Aedes aegypti]
Length = 370
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
T R R ++S Q+VELEKEFRL YL RR ++ +L LTERQIKIWFQNRRMK K+
Sbjct: 100 TKRSRTAFTSQQLVELEKEFRLNRYLCRPRRIEIATKLALTERQIKIWFQNRRMKHKK-- 157
Query: 383 PDMVV--EYVKE 392
D++ EY KE
Sbjct: 158 -DIIAGGEYTKE 168
>gi|217035832|gb|ACJ74387.1| Hox8 [Branchiostoma lanceolatum]
Length = 213
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMKLK+
Sbjct: 131 RGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKKEAAM 190
Query: 385 MV---VEYVKESSEARS 398
+ VE ++SS+ +S
Sbjct: 191 LCPPKVEETEKSSDGQS 207
>gi|47551093|ref|NP_999725.1| homeobox protein HB1 [Strongylocentrotus purpuratus]
gi|2506527|sp|P13545.2|HMB1_STRPU RecName: Full=Homeobox protein HB1; AltName: Full=SPHBOX1
gi|1339973|dbj|BAA12813.1| homeobox [Strongylocentrotus purpuratus]
Length = 308
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 280 ASDSLSSEKDIPSNLDLSQIPKPPPSSS-HTYSNQIHKNL-LQCNTGRFRQVYSSHQIVE 337
+ L S P+N SQ+ P S+S + + N+ L+ R RQ Y+ +Q +E
Sbjct: 145 GTGCLVSAAAEPNNNHCSQVMSPCKSTSGYPWMPVSGPNVGLEVGRKRCRQTYTRYQTLE 204
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
LEKEF YL RR LS LGLTERQIKIWFQNRRMK K+
Sbjct: 205 LEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKK 247
>gi|311275738|ref|XP_003134886.1| PREDICTED: homeobox protein Hox-A9-like [Sus scrofa]
gi|350595413|ref|XP_003484104.1| PREDICTED: homeobox protein Hox-A9-like [Sus scrofa]
Length = 272
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|195498939|ref|XP_002096737.1| GE25832 [Drosophila yakuba]
gi|194182838|gb|EDW96449.1| GE25832 [Drosophila yakuba]
Length = 252
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
R R +SSHQ++ELE+EF L YL RR +S+ L LTERQ+KIWFQNRRMKLK++
Sbjct: 45 RSRTAFSSHQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKS 101
>gi|190576601|gb|ACE79089.1| homeobox A9 (predicted) [Sorex araneus]
Length = 272
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|73976177|ref|XP_539489.2| PREDICTED: homeobox protein Hox-A9 isoform 1 [Canis lupus
familiaris]
gi|410952528|ref|XP_003982931.1| PREDICTED: homeobox protein Hox-A9 [Felis catus]
Length = 272
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|338724123|ref|XP_003364875.1| PREDICTED: homeobox protein Hox-A9-like [Equus caballus]
Length = 272
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|195568807|ref|XP_002102405.1| GD19524 [Drosophila simulans]
gi|194198332|gb|EDX11908.1| GD19524 [Drosophila simulans]
Length = 252
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
+ R R +SSHQ++ELE+EF L YL RR +S+ L LTERQ+KIWFQNRRMKLK++
Sbjct: 43 SKRSRTAFSSHQLIELEREFHLNKYLARARRIEISQRLALTERQVKIWFQNRRMKLKKS 101
>gi|184185537|gb|ACC68938.1| homeobox A9 (predicted) [Rhinolophus ferrumequinum]
Length = 272
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|154183831|gb|ABS70771.1| Hoxa7a [Haplochromis burtoni]
Length = 224
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 42/63 (66%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
N R RQ YS HQ +ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 125 NRKRGRQTYSRHQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 184
Query: 382 HPD 384
H D
Sbjct: 185 HKD 187
>gi|348522889|ref|XP_003448956.1| PREDICTED: homeobox protein Hox-A7-like [Oreochromis niloticus]
Length = 224
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 42/63 (66%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
N R RQ YS HQ +ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 125 NRKRGRQTYSRHQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 184
Query: 382 HPD 384
H D
Sbjct: 185 HKD 187
>gi|70569907|dbj|BAE06500.1| transcription factor protein [Ciona intestinalis]
Length = 733
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y++ Q+VELEKEF ++YL RR L++ LGLTERQIKIWFQNRRMK K+
Sbjct: 369 RERTAYTNSQLVELEKEFHFSHYLCRPRRIELAQGLGLTERQIKIWFQNRRMKFKK 424
>gi|74096089|ref|NP_001027669.1| homeoprotein 3 [Ciona intestinalis]
gi|4583562|emb|CAB40561.1| homeoprotein [Ciona intestinalis]
Length = 733
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y++ Q+VELEKEF ++YL RR L++ LGLTERQIKIWFQNRRMK K+
Sbjct: 369 RERTAYTNSQLVELEKEFHFSHYLCRPRRIELAQGLGLTERQIKIWFQNRRMKFKK 424
>gi|397911066|gb|AFO68809.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 215
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 55/97 (56%)
Query: 284 LSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFR 343
L S + P + +Q+P+P P S + + R RQ Y+ +Q +ELEKEF
Sbjct: 88 LPSAQVSPGSTVGAQLPQPTPPVSPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFH 147
Query: 344 LTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 148 FNKYLTRKRRIEIAHLLGLTERQIKIWFQNRRMKWKK 184
>gi|387598538|gb|AFJ91925.1| homeodomain transcription factor Lox5 [Platynereis dumerilii]
Length = 321
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+ +
Sbjct: 196 RTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKE--N 253
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPN 416
+ + + E + A + + ++ PAD+S+P+
Sbjct: 254 NLAKLTGPNGEPKPALPRVDDKT-PADSSSPS 284
>gi|332692496|gb|AEE90175.1| Homeobox B8b [Anguilla anguilla]
gi|385654489|gb|AFI61988.1| Hox-B8b [Anguilla japonica]
Length = 248
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 52/90 (57%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+ +
Sbjct: 149 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 208
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSA 414
K EA +K N Q+ A T+
Sbjct: 209 DKFPSSKSEQEAIEQQRKENDQNEEAQTAG 238
>gi|74267513|dbj|BAE44255.1| hoxA9a [Oryzias latipes]
gi|83016927|dbj|BAE53459.1| hoxA9a [Oryzias latipes]
Length = 263
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 8/103 (7%)
Query: 282 DSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKE 341
D LS++ D+ + + KP ++ SN +H + T + R Y+ HQI+ELEKE
Sbjct: 163 DELSAQADVSAEGE----EKPGLDPNNPVSNWLHASA----TRKKRCPYTKHQILELEKE 214
Query: 342 FRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
F YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 215 FLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKD 257
>gi|296209377|ref|XP_002807079.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A9 [Callithrix
jacchus]
Length = 271
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 187 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 242
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 243 NLTERQVKIWFQNRRMKMKKINKD 266
>gi|410905343|ref|XP_003966151.1| PREDICTED: homeobox protein Hox-A9b-like [Takifugu rubripes]
gi|119370775|sp|Q1KKZ3.1|HXA9B_FUGRU RecName: Full=Homeobox protein Hox-A9b
gi|94482782|gb|ABF22401.1| homeobox protein HoxA9b [Takifugu rubripes]
Length = 249
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
+N N L R ++ Y+ HQI+ELEKEF YLP DRR +++ L LTERQ+KI
Sbjct: 170 ANNPSSNWLHAKPTRKKRCPYTKHQILELEKEFLFNMYLPRDRRYEVARLLHLTERQVKI 229
Query: 370 WFQNRRMKLKRTHPD 384
WFQNRRMK+K+ + D
Sbjct: 230 WFQNRRMKMKKENKD 244
>gi|170649681|gb|ACB21266.1| homeobox protein Hox-A9 (predicted) [Callicebus moloch]
Length = 273
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 189 KPPTDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 244
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 245 NLTERQVKIWFQNRRMKMKKINKD 268
>gi|49583|emb|CAA31888.1| unnamed protein product [Cavia sp.]
Length = 176
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 304 PSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLT 363
PS+ + +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L LT
Sbjct: 95 PSADNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLT 150
Query: 364 ERQIKIWFQNRRMKLKRTHPD 384
ERQ+KIWFQNRRMK+K+ + D
Sbjct: 151 ERQVKIWFQNRRMKMKKINKD 171
>gi|160421815|gb|ABX39492.1| AmphiHox8 [Branchiostoma floridae]
Length = 212
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMKLK+
Sbjct: 129 RGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKK 184
>gi|410934531|gb|AFV93982.1| homeodomain-containing protein Hox8, partial [Branchiostoma
lanceolatum]
Length = 199
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMKLK+
Sbjct: 124 RGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKK 179
>gi|259013356|ref|NP_001158385.1| homeobox 4 [Saccoglossus kowalevskii]
gi|32307801|gb|AAP79297.1| hox4 [Saccoglossus kowalevskii]
Length = 274
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ +Q++ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+ H
Sbjct: 186 RTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKDH 243
>gi|83318790|emb|CAI91292.1| fushi tarazu [Cupiennius salei]
Length = 178
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 297 SQIPKPPPSSSHTYSNQIHKNLLQCNTG---------RFRQVYSSHQIVELEKEFRLTNY 347
S + PP ++HT + QI K L R RQ Y+ +Q +ELEKEF Y
Sbjct: 17 SSVLSSPPVTAHTQNPQISKPLYPWMKSHGDTTPGPKRSRQTYTRYQTLELEKEFHFNQY 76
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
L RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 77 LTRRRRIEIAHTLGLTERQIKIWFQNRRMKAKK 109
>gi|358341731|dbj|GAA49331.1| homeobox protein Hox-B3 [Clonorchis sinensis]
Length = 531
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 44/56 (78%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y++ Q+VELEKEF +NYL RR L+K+LGL+ERQIKIWFQNRRMK K+
Sbjct: 330 RPRSAYTNQQLVELEKEFHYSNYLVQPRRVELAKQLGLSERQIKIWFQNRRMKQKK 385
>gi|255755643|dbj|BAH96547.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 278
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 314 IHKNLLQCNTG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
IH + G R R Y+ +Q++ELEKEF YL RR ++ LGLTERQ+KI
Sbjct: 174 IHPGVGAAQNGAEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHALGLTERQVKI 233
Query: 370 WFQNRRMKLKRTH 382
WFQNRRMK K+ H
Sbjct: 234 WFQNRRMKWKKDH 246
>gi|344270544|ref|XP_003407104.1| PREDICTED: homeobox protein Hox-A9-like [Loxodonta africana]
Length = 271
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 187 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 242
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 243 NLTERQVKIWFQNRRMKMKKINKD 266
>gi|290563452|ref|NP_001166809.1| abdominal A isoform 3 [Bombyx mori]
gi|164682500|gb|ABY66347.1| homeobox protein [Bombyx mori]
Length = 343
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 291 PSNLDLSQIPKPPPSSSHTYSNQIHKNLLQ---CNTGRFRQVYSSHQIVELEKEFRLTNY 347
PS L +IP+ P S + N + + C R RQ Y+ Q +ELEKEF +Y
Sbjct: 183 PSAQTLPEIPRYPWMSITDWMNPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHY 242
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
L RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 243 LTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 275
>gi|477807|pir||B48428 homeotic protein Hox 1.7 (clone GPK5) - guinea pig
Length = 180
Score = 76.6 bits (187), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 304 PSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLT 363
PS+ + +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L LT
Sbjct: 99 PSADNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLT 154
Query: 364 ERQIKIWFQNRRMKLKRTHPD 384
ERQ+KIWFQNRRMK+K+ + D
Sbjct: 155 ERQVKIWFQNRRMKMKKINKD 175
>gi|1708347|sp|P51783.1|HXA9_CAVPO RecName: Full=Homeobox protein Hox-A9; AltName: Full=Homeobox
protein Hox-1.7
gi|49581|emb|CAA31887.1| Hox-1.7 protein (162 AA) [Cavia sp.]
Length = 162
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 78 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 133
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 134 NLTERQVKIWFQNRRMKMKKINKD 157
>gi|322366542|gb|ADW95345.1| Hox7 [Paracentrotus lividus]
Length = 321
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR LS LGLTERQIKIWFQNRRMK K+
Sbjct: 204 RCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKK 259
>gi|348564438|ref|XP_003468012.1| PREDICTED: homeobox protein Hox-A9-like [Cavia porcellus]
Length = 272
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|109473501|ref|XP_001057018.1| PREDICTED: homeobox protein Hox-A9 [Rattus norvegicus]
gi|392347320|ref|XP_003749799.1| PREDICTED: homeobox protein Hox-A9 [Rattus norvegicus]
gi|392347334|ref|XP_003749806.1| PREDICTED: homeobox protein Hox-A9-like [Rattus norvegicus]
gi|392356121|ref|XP_003752231.1| PREDICTED: homeobox protein Hox-A9-like [Rattus norvegicus]
gi|149033354|gb|EDL88155.1| rCG52500, isoform CRA_a [Rattus norvegicus]
Length = 271
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 187 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 242
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 243 NLTERQVKIWFQNRRMKMKKINKD 266
>gi|339241421|ref|XP_003376636.1| homeobox protein CDX-1 [Trichinella spiralis]
gi|316974635|gb|EFV58119.1| homeobox protein CDX-1 [Trichinella spiralis]
Length = 429
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VYSS Q +ELEK+F ++ ++RR++LSK LGLTERQ+KIWFQNRR K K+ +
Sbjct: 302 KYRMVYSSFQRLELEKDFCYNRFVTTERRRILSKLLGLTERQVKIWFQNRRAKEKKCN 359
>gi|403287997|ref|XP_003935204.1| PREDICTED: homeobox protein Hox-A9 [Saimiri boliviensis
boliviensis]
Length = 273
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 189 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 244
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 245 NLTERQVKIWFQNRRMKMKKINKD 268
>gi|431909016|gb|ELK12607.1| Homeobox protein Hox-A7 [Pteropus alecto]
Length = 232
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YLP RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLPRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 189
>gi|301614400|ref|XP_002936696.1| PREDICTED: homeobox protein Hox-D3 [Xenopus (Silurana) tropicalis]
Length = 394
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%)
Query: 314 IHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQN 373
+ + L + R R Y++ Q+VELEKEF YL RR ++K L L+ERQIKIWFQN
Sbjct: 154 VDSSFLSSASKRARTAYTNSQLVELEKEFHFNRYLCRPRRLEMAKLLNLSERQIKIWFQN 213
Query: 374 RRMKLKRTH 382
RRMK K+ H
Sbjct: 214 RRMKFKKDH 222
>gi|281182601|ref|NP_001162370.1| homeobox protein Hox-A9 [Papio anubis]
gi|160904221|gb|ABX52205.1| homeobox A9 (predicted) [Papio anubis]
Length = 272
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|14149641|ref|NP_034586.1| homeobox protein Hox-A9 [Mus musculus]
gi|6166220|sp|P09631.2|HXA9_MOUSE RecName: Full=Homeobox protein Hox-A9; AltName: Full=Homeobox
protein Hox-1.7
gi|3080548|dbj|BAA25800.1| Hoxa-9 [Mus musculus]
gi|32822880|gb|AAH55059.1| Homeo box A9 [Mus musculus]
gi|148666248|gb|EDK98664.1| homeobox A9, isoform CRA_a [Mus musculus]
Length = 271
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 187 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 242
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 243 NLTERQVKIWFQNRRMKMKKINKD 266
>gi|47229431|emb|CAF99419.1| unnamed protein product [Tetraodon nigroviridis]
Length = 265
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%)
Query: 312 NQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWF 371
N + L T + R Y+ HQI+ELEKEF YL DRR +++ L LTERQ+KIWF
Sbjct: 187 NPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWF 246
Query: 372 QNRRMKLKRTHPD 384
QNRRMK+K+ + D
Sbjct: 247 QNRRMKMKKFNKD 259
>gi|109067063|ref|XP_001091402.1| PREDICTED: homeobox protein Hox-A9 [Macaca mulatta]
gi|355560737|gb|EHH17423.1| Homeobox protein Hox-1G [Macaca mulatta]
Length = 272
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|6016294|sp|O42506.1|HXA9A_FUGRU RecName: Full=Homeobox protein Hox-A9a; Short=HoxA-9
gi|2341093|gb|AAB68684.1| homeodomain protein HOXA-9 [Takifugu rubripes]
gi|94482759|gb|ABF22379.1| homeobox protein HoxA9a [Takifugu rubripes]
Length = 283
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 309 TYS----NQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTE 364
TYS N + L T + R Y+ HQI+ELEKEF YL DRR +++ L LTE
Sbjct: 198 TYSGDRDNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTE 257
Query: 365 RQIKIWFQNRRMKLKRTHPD 384
RQ+KIWFQNRRMK+K+ + D
Sbjct: 258 RQVKIWFQNRRMKMKKFNKD 277
>gi|91982983|gb|ABE68629.1| Cnox-1 [Eleutheria dichotoma]
Length = 308
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 20/92 (21%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++ R R YS Q++ELEKEF L+++L +RR L+K+L L+ERQIKIWFQNRRMK K+
Sbjct: 179 IDSKRKRMTYSRKQLLELEKEFHLSHFLKKERRVDLAKQLNLSERQIKIWFQNRRMKFKK 238
Query: 381 --------------------THPDMVVEYVKE 392
HPD++ E V E
Sbjct: 239 ENKKTSSSESIMNQEAPKIEEHPDIISENVTE 270
>gi|3559789|gb|AAD08713.1| homeodomain protein [Homo sapiens]
Length = 272
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|410911104|ref|XP_003969030.1| PREDICTED: homeobox protein Hox-A9a-like isoform 1 [Takifugu
rubripes]
Length = 264
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
+N + L T + R Y+ HQI+ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 185 NNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIW 244
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 245 FQNRRMKMKKFNKD 258
>gi|395738613|ref|XP_003777121.1| PREDICTED: homeobox protein Hox-A9 [Pongo abelii]
Length = 272
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|355747753|gb|EHH52250.1| Homeobox protein Hox-1G [Macaca fascicularis]
Length = 272
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|354479671|ref|XP_003502033.1| PREDICTED: homeobox protein Hox-A9-like [Cricetulus griseus]
gi|344252755|gb|EGW08859.1| Homeobox protein Hox-A9 [Cricetulus griseus]
Length = 271
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 187 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 242
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 243 NLTERQVKIWFQNRRMKMKKINKD 266
>gi|327280442|ref|XP_003224961.1| PREDICTED: homeobox protein Hox-A9-like [Anolis carolinensis]
Length = 282
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 307 SHTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTER 365
+H N N L + R ++ Y+ HQ +ELEKEF YL DRR +++ L LTER
Sbjct: 199 NHIDPNNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTER 258
Query: 366 QIKIWFQNRRMKLKRTHPDMVVE 388
Q+KIWFQNRRMK+K+ + D V E
Sbjct: 259 QVKIWFQNRRMKMKKINKDRVKE 281
>gi|38016603|gb|AAR07635.1| transcription factor Hox4 [Ptychodera flava]
Length = 275
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 314 IHKNLLQCNTG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
IH + G R R Y+ +Q++ELEKEF YL RR ++ LGLTERQ+KI
Sbjct: 172 IHPGVGAAQNGTEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHALGLTERQVKI 231
Query: 370 WFQNRRMKLKRTH 382
WFQNRRMK K+ H
Sbjct: 232 WFQNRRMKWKKDH 244
>gi|284005076|ref|NP_001164874.1| homeobox protein Hox-A9 [Oryctolagus cuniculus]
gi|217418310|gb|ACK44312.1| homeobox A9 (predicted) [Oryctolagus cuniculus]
Length = 276
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 192 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 247
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 248 NLTERQVKIWFQNRRMKMKKINKD 271
>gi|30584147|gb|AAP36322.1| Homo sapiens homeo box A9 [synthetic construct]
gi|60653827|gb|AAX29606.1| homeobox A9 [synthetic construct]
Length = 273
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|380028373|ref|XP_003697878.1| PREDICTED: uncharacterized protein LOC100865753 [Apis florea]
Length = 577
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 322 NTG--RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
NTG R RQ Y+ HQ +ELEKEF YL RR ++K L LTERQ+KIWFQNRRMK K
Sbjct: 443 NTGQKRTRQTYTRHQTLELEKEFHYNRYLTRHRRLEIAKALSLTERQVKIWFQNRRMKAK 502
Query: 380 R 380
+
Sbjct: 503 K 503
>gi|332242662|ref|XP_003270502.1| PREDICTED: homeobox protein Hox-A9 [Nomascus leucogenys]
Length = 272
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|62958634|gb|AAY23645.1| Hox protein [Oreochromis niloticus]
Length = 91
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQI+ELEKEF YLP DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 32 YTKHQILELEKEFLFNMYLPRDRRYEIARLLNLTERQVKIWFQNRRMKMKKENKD 86
>gi|383849603|ref|XP_003700434.1| PREDICTED: homeotic protein ultrabithorax-like [Megachile
rotundata]
Length = 329
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEF 342
SL+S P L Q P+ SHT+ + R RQ Y+ +Q +ELEKEF
Sbjct: 194 SLNSSASQPVATQLHQ----QPTGSHTFYPWMAIAGANGMRRRGRQTYTRYQTLELEKEF 249
Query: 343 RLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 250 HTSHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKK 287
>gi|301612429|ref|XP_002935718.1| PREDICTED: homeobox protein Hox-D4a-like isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301612431|ref|XP_002935719.1| PREDICTED: homeobox protein Hox-D4a-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 237
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 280 ASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQ 334
+S S++ P N L + PP+ + + ++H N + N TG R R Y+ Q
Sbjct: 103 SSSRACSQQQHPKNGSLGK----PPAIVYPWMKKVHCNSVNPNYTGGEPKRSRTAYTRQQ 158
Query: 335 IVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 159 VLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDH 206
>gi|4322064|gb|AAD15941.1| homeobox protein [Danio rerio]
Length = 250
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 14/103 (13%)
Query: 280 ASDSLSSEK--DIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVE 337
A S ++EK DI N L IP+ P SN +H + +T + R Y+ HQI+E
Sbjct: 151 AESSRTAEKSGDIEGNRAL--IPENP------VSNWLHAS----STRKKRCPYTKHQILE 198
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
LEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 199 LEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 241
>gi|281349540|gb|EFB25124.1| hypothetical protein PANDA_000656 [Ailuropoda melanoleuca]
Length = 272
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTH 382
LTERQ+KIWFQNRRMK+K+ +
Sbjct: 244 NLTERQVKIWFQNRRMKMKKIN 265
>gi|23097236|ref|NP_689952.1| homeobox protein Hox-A9 [Homo sapiens]
gi|6166219|sp|P31269.4|HXA9_HUMAN RecName: Full=Homeobox protein Hox-A9; AltName: Full=Homeobox
protein Hox-1G
gi|14603109|gb|AAH10023.1| Homeobox A9 [Homo sapiens]
gi|16306819|gb|AAH06537.1| Homeobox A9 [Homo sapiens]
gi|30582819|gb|AAP35636.1| homeo box A9 [Homo sapiens]
gi|61362010|gb|AAX42140.1| homeobox A9 [synthetic construct]
gi|61362016|gb|AAX42141.1| homeobox A9 [synthetic construct]
gi|117645874|emb|CAL38404.1| hypothetical protein [synthetic construct]
gi|119614286|gb|EAW93880.1| hCG39031, isoform CRA_c [Homo sapiens]
gi|123984657|gb|ABM83674.1| homeobox A9 [synthetic construct]
gi|123998647|gb|ABM86962.1| homeobox A9 [synthetic construct]
gi|208966496|dbj|BAG73262.1| homeobox A9 [synthetic construct]
Length = 272
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|395830954|ref|XP_003788577.1| PREDICTED: homeobox protein Hox-A9 [Otolemur garnettii]
gi|202070730|gb|ACH95318.1| homeobox A9 (predicted) [Otolemur garnettii]
Length = 272
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|348522807|ref|XP_003448915.1| PREDICTED: homeobox protein Hox-A9-like [Oreochromis niloticus]
Length = 264
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
+N + L T + R Y+ HQI+ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 185 NNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIW 244
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 245 FQNRRMKMKKFNKD 258
>gi|213514446|ref|NP_001133033.1| homeobox protein HoxA7aa [Salmo salar]
gi|157816041|gb|ABV82039.1| homeobox protein HoxA7aa [Salmo salar]
gi|158702220|gb|ABW77441.1| homeobox protein HoxA7aa [Salmo salar]
Length = 247
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
N R RQ YS +Q +E+EKEF YL RR +++ L LTERQIKIWFQNRRMK K+
Sbjct: 123 NRKRGRQTYSRYQTLEMEKEFHFNRYLTRRRRVEIAQVLCLTERQIKIWFQNRRMKWKKD 182
Query: 382 HPD 384
H D
Sbjct: 183 HKD 185
>gi|154183832|gb|ABS70772.1| Hoxa9a [Haplochromis burtoni]
Length = 264
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
+N + L T + R Y+ HQI+ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 185 NNPVSNWLHASATRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIW 244
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 245 FQNRRMKMKKFNKD 258
>gi|426355754|ref|XP_004045273.1| PREDICTED: homeobox protein Hox-A9 [Gorilla gorilla gorilla]
Length = 272
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|402587335|gb|EJW81270.1| hypothetical protein WUBG_07821, partial [Wuchereria bancrofti]
Length = 218
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 270 QQVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQV 329
++V K + GAS + + +P +Q+P P P+S Y + C R RQ
Sbjct: 101 ERVDKKVASGASWCMPTMPTMPQPWP-NQVP-PHPASYVPYP------IYNCK-KRGRQT 151
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS Q +ELEKEF YL RR L++ LGLTERQIKIWFQNRRMK K+
Sbjct: 152 YSRQQTLELEKEFHYNKYLTRRRRIELNRTLGLTERQIKIWFQNRRMKKKK 202
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ Y +Q LE +F+ ++Y+ +R+ L + L++RQIKIWFQNRRMK K+
Sbjct: 6 RQTYQRYQTSVLESKFQQSSYVSKKQREELRLQTNLSDRQIKIWFQNRRMKAKK 59
>gi|350410207|ref|XP_003488980.1| PREDICTED: homeobox protein Hox-A3-like [Bombus impatiens]
Length = 324
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 41/58 (70%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R R Y+S Q+VELEKEF T YL RR L+ L LTERQIKIWFQNRRMK K+
Sbjct: 55 TKRTRTAYTSAQLVELEKEFNRTRYLCRPRRIELAAALSLTERQIKIWFQNRRMKYKK 112
>gi|443689502|gb|ELT91876.1| hypothetical protein CAPTEDRAFT_94911, partial [Capitella teleta]
Length = 92
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 288 KDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNY 347
+DI S+ L+ PPP+S + + N + R R Y++ Q++ELEKEF Y
Sbjct: 3 QDITSSGLLTSGVAPPPTSCGNTGSSVASN----HPRRLRTAYTNTQLLELEKEFHFNKY 58
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
L RR ++ L LTERQ+K+WFQNRRMK KR
Sbjct: 59 LCRPRRIEIAASLDLTERQVKVWFQNRRMKFKR 91
>gi|397472857|ref|XP_003807950.1| PREDICTED: homeobox protein Hox-A9 [Pan paniscus]
Length = 272
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|47218111|emb|CAG09983.1| unnamed protein product [Tetraodon nigroviridis]
Length = 546
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
S+Q N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 459 SDQPANNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLEISRSVNLTDRQVKI 518
Query: 370 WFQNRRMKLKR 380
WFQNRRMKLK+
Sbjct: 519 WFQNRRMKLKK 529
>gi|297680786|ref|XP_002818149.1| PREDICTED: homeobox protein Hox-A3 [Pongo abelii]
Length = 443
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 RTHPDMVVEYVKESSEARSASQ 401
+ D + + SS A+S S+
Sbjct: 248 K---DQKGKGMLTSSGAQSPSR 266
>gi|190576598|gb|ACE79086.1| homeobox A3 (predicted) [Sorex araneus]
Length = 442
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 187 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 246
Query: 380 RTHPDMVVEYVKESSEARSASQ 401
+ D + V SS +S S+
Sbjct: 247 K---DQKGKGVLTSSGGQSPSR 265
>gi|347972371|ref|XP_003436884.1| AGAP013157-PA [Anopheles gambiae str. PEST]
gi|333467594|gb|EGK96612.1| AGAP013157-PA [Anopheles gambiae str. PEST]
Length = 447
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 8/113 (7%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R RQ YS HQ +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ +
Sbjct: 270 RTRQSYSRHQTIELEKEFHFNRYLNRRRRIEIASMLKLTERQIKIWFQNRRMKAKKDNSA 329
Query: 383 ----PDMVV--EYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIREH 429
PD+ E ++S E+ A Q +H ++ + + NT + + + H
Sbjct: 330 SANTPDLTYDGEIPQQSLESIVAVQSQHHTASDSQPLSMNTSASTVTQQVGRH 382
>gi|363807230|ref|NP_001241873.1| homeo box C10a [Danio rerio]
Length = 327
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 305 SSSHTYSNQIHK---NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
S + +Y +++ K N L+ +GR ++ Y+ HQ +ELEKEF YL +RR +SK +
Sbjct: 232 SKTESYESKLEKATGNWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSI 291
Query: 361 GLTERQIKIWFQNRRMKLKR 380
LT+RQ+KIWFQNRRMKLK+
Sbjct: 292 NLTDRQVKIWFQNRRMKLKK 311
>gi|156551123|ref|XP_001603670.1| PREDICTED: hypothetical protein LOC100110062 [Nasonia vitripennis]
Length = 448
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 274 RTRQTYTRYQTLELEKEFHFCRYLSRKRRVEIAHSLGLTERQIKIWFQNRRMKAKK 329
>gi|390351575|ref|XP_003727686.1| PREDICTED: uncharacterized protein LOC574804 [Strongylocentrotus
purpuratus]
Length = 270
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ Q +ELEKEF + Y+ RR +++ LGL+ERQIKIWFQNRRMK KR H
Sbjct: 191 RGRQTYTRQQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWKREH 248
>gi|149033355|gb|EDL88156.1| rCG52500, isoform CRA_b [Rattus norvegicus]
Length = 138
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 54 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 109
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 110 NLTERQVKIWFQNRRMKMKKINKD 133
>gi|255755649|dbj|BAH96550.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 248
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 61/106 (57%), Gaps = 19/106 (17%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR LS LGLTERQIKIWFQNRRMK K+
Sbjct: 151 RCRQTYTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKK---- 206
Query: 385 MVVEYVKESSEARSASQKT----------NHQSAPADTSAPNTHMK 420
E K+ SE S +Q NH+SA DT+A NT ++
Sbjct: 207 ---ESKKDDSEITSDTQNQESLTTNDVTENHKSAE-DTTA-NTSIQ 247
>gi|114612547|ref|XP_001162954.1| PREDICTED: homeobox protein Hox-A9 [Pan troglodytes]
gi|410210788|gb|JAA02613.1| homeobox A9 [Pan troglodytes]
gi|410331925|gb|JAA34909.1| homeobox A9 [Pan troglodytes]
Length = 272
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>gi|432933121|ref|XP_004081815.1| PREDICTED: homeobox protein Hox-D10a-like [Oryzias latipes]
gi|74267583|dbj|BAE44290.1| hoxD10a [Oryzias latipes]
gi|83016977|dbj|BAE53498.1| hoxD10a [Oryzias latipes]
Length = 336
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 253 SKLEEPNKTSSILLAHLQQVQKDLGLGASD--SLSSEKDIPSNLDLSQIPKPPPSSSHTY 310
S E K S + H + + + + D S S EK+ +S P+P
Sbjct: 190 SGFAEAEKKSQDVTQHTESTRTPVPAESPDPKSSSEEKNCSGEAPVSS-PEPQKEGKDCR 248
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
S+ + N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 249 SDSLTNNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVNLTDRQVKI 308
Query: 370 WFQNRRMKLKRTH 382
WFQNRRMKLK+ +
Sbjct: 309 WFQNRRMKLKKMN 321
>gi|257042436|gb|ACV32773.1| HOXC10 [Gekko japonicus]
Length = 376
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 271 QVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQV- 329
+ +K L + SEKD+ D S + + N L +GR ++
Sbjct: 249 KTEKSLPVAKISPSESEKDLSKCTDTSTDNSDNEAKEDIKAENTTGNWLTAKSGRKKRCP 308
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRRMKLK+ +
Sbjct: 309 YTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMN 361
>gi|359754088|gb|AEV59511.1| HOXA7 [Macropus eugenii]
Length = 227
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>gi|354479669|ref|XP_003502032.1| PREDICTED: homeobox protein Hox-A7-like [Cricetulus griseus]
Length = 233
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 134 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 193
>gi|32367|emb|CAA28411.1| unnamed protein product [Homo sapiens]
gi|225392|prf||1301323A gene homeobox
Length = 255
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 53/100 (53%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEF 342
S S K PS L Q P ++N ++ N R R Y+ Q++ELEKEF
Sbjct: 114 SQSDPKQPPSGTALKQPAVVYPWMKKVHANSVNPNYTGGEPKRSRTAYTRQQVLELEKEF 173
Query: 343 RLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 174 HFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|260835435|ref|XP_002612714.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
gi|160421813|gb|ABX39490.1| AmphiHox6 [Branchiostoma floridae]
gi|229298093|gb|EEN68723.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
Length = 227
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%)
Query: 284 LSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFR 343
L S + P + +Q+P+P P + + R RQ Y+ +Q +ELEKEF
Sbjct: 95 LPSAQGSPGSTVGAQLPQPTPPVFPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFH 154
Query: 344 LTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 155 FNKYLTRKRRIEIAHLLGLTERQIKIWFQNRRMKWKK 191
>gi|62751911|ref|NP_571607.2| homeobox protein Hox-A9a [Danio rerio]
gi|110282970|sp|Q9PWL6.2|HXA9A_DANRE RecName: Full=Homeobox protein Hox-A9a; Short=Hoxx9
gi|60416115|gb|AAH90700.1| Homeo box A9a [Danio rerio]
gi|182889636|gb|AAI65442.1| Hoxa9a protein [Danio rerio]
Length = 250
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KP + SN +H + +T + R Y+ HQI+ELEKEF YL DRR +++ L
Sbjct: 166 KPGADPENPVSNWLHAS----STRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLL 221
Query: 361 GLTERQIKIWFQNRRMKLKR 380
LTERQ+KIWFQNRRMK+K+
Sbjct: 222 NLTERQVKIWFQNRRMKMKK 241
>gi|390351573|ref|XP_003727685.1| PREDICTED: homeobox protein Hox-A6-like [Strongylocentrotus
purpuratus]
Length = 280
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+ H
Sbjct: 194 RSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKEH 251
>gi|254692756|dbj|BAH23873.2| transcription factor Hox4 [Balanoglossus misakiensis]
Length = 209
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 314 IHKNLLQCNTG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
IH + G R R Y+ +Q++ELEKEF YL RR ++ LGLTERQ+KI
Sbjct: 106 IHPGVGTAQNGTEHKRTRTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHALGLTERQVKI 165
Query: 370 WFQNRRMKLKRTH 382
WFQNRRMK K+ H
Sbjct: 166 WFQNRRMKWKKDH 178
>gi|426355750|ref|XP_004045271.1| PREDICTED: homeobox protein Hox-A7 [Gorilla gorilla gorilla]
Length = 230
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|217035828|gb|ACJ74384.1| Hox6 [Branchiostoma lanceolatum]
Length = 227
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%)
Query: 284 LSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFR 343
L S + P + +Q+P+P P + + R RQ Y+ +Q +ELEKEF
Sbjct: 95 LPSAQGSPGSTVGAQLPQPTPPVFPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFH 154
Query: 344 LTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 155 FNKYLTRKRRIEIAHLLGLTERQIKIWFQNRRMKWKK 191
>gi|148666249|gb|EDK98665.1| homeobox A9, isoform CRA_b [Mus musculus]
Length = 295
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 211 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 266
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 267 NLTERQVKIWFQNRRMKMKKINKD 290
>gi|5916190|gb|AAD55933.1|AF163857_1 homeoprotein CH-Hox2 [Chaetopterus variopedatus]
Length = 718
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR---T 381
R R Y++ Q++ELEKEF YL RR ++ L LTERQ+K+WFQNRRMK KR
Sbjct: 144 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKFKRQSQG 203
Query: 382 HPDMVVEYVKESSEARSASQKTNHQSAPADTS 413
P M ++A S K S PAD++
Sbjct: 204 KPGM-------DADALSGDDKVTSSSPPADST 228
>gi|2689627|gb|AAB91393.1| ultrabithorax, partial [Ethmostigmus rubripes]
Length = 104
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 7 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 63
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNT 417
++ +KE +E +Q +A A T T
Sbjct: 64 --IQAIKELNEQEKQAQNAKQANATAVTPGATT 94
>gi|327263951|ref|XP_003216780.1| PREDICTED: hypothetical protein LOC100552181 [Anolis carolinensis]
Length = 672
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 271 QVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQV- 329
+ +K L + + +EKD+ D S + + N L +GR ++
Sbjct: 545 KTEKSLPVAKTSPSEAEKDLSKCTDTSTDNSDNEAKEDIKAENTTGNWLTAKSGRKKRCP 604
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRRMKLK+ +
Sbjct: 605 YTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMN 657
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R YS QI ELE+EF Y+ ++R LS+ L LT+RQ+KIWFQNRRMK K+ D
Sbjct: 247 RCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRD 304
>gi|149633997|ref|XP_001509365.1| PREDICTED: homeobox protein Hox-A7-like [Ornithorhynchus anatinus]
Length = 224
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>gi|429510500|gb|AFZ94988.1| transcription factor Hox 3 [Petromyzon marinus]
Length = 498
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 238 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDH 295
>gi|195954555|gb|ACG58970.1| ultrabithorax [Archegozetes longisetosus]
Length = 97
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 7 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE--- 63
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPN 416
++ +KE +E +Q QS + S N
Sbjct: 64 --IQAIKELNEQERQAQANKLQSTSSSGSTDN 93
>gi|121308920|dbj|BAF43725.1| transcription factor Hox7 [Metacrinus rotundus]
Length = 256
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR LS LGLTERQIKIWFQNRRMK K+
Sbjct: 162 RCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKK 217
>gi|520616|emb|CAA84518.1| Hox-6 homeodomain protein [Branchiostoma floridae]
gi|745778|prf||2016458E Hox-6 gene
Length = 227
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%)
Query: 284 LSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFR 343
L S + P + +Q+P+P P + + R RQ Y+ +Q +ELEKEF
Sbjct: 95 LPSAQGSPGSTVGAQLPQPTPPVFPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFH 154
Query: 344 LTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 155 FNKYLTRKRRIEIAHLLGLTERQIKIWFQNRRMKWKK 191
>gi|344270552|ref|XP_003407108.1| PREDICTED: homeobox protein Hox-A3 [Loxodonta africana]
Length = 441
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|21389051|gb|AAM50460.1|AF393444_1 Diva [Sacculina carcini]
Length = 393
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 321 CNTG-RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
C T R RQ Y+ +Q +ELEKEFR YL RR +++ + LTERQIKIWFQNRRMK K
Sbjct: 220 CVTAKRTRQSYTRYQTLELEKEFRTNRYLTRRRRIEIARTVALTERQIKIWFQNRRMKAK 279
Query: 380 RTH 382
+ H
Sbjct: 280 KEH 282
>gi|74267511|dbj|BAE44254.1| hoxA7a [Oryzias latipes]
gi|83016928|dbj|BAE53460.1| hoxA7a [Oryzias latipes]
Length = 215
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 41/61 (67%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
N R RQ YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 122 NRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRVEIAHALTLTERQIKIWFQNRRMKWKKD 181
Query: 382 H 382
H
Sbjct: 182 H 182
>gi|119370803|sp|Q1KKT0.1|HXDAA_FUGRU RecName: Full=Homeobox protein Hox-D10a
gi|94482849|gb|ABF22464.1| homeobox protein HoxD10a [Takifugu rubripes]
Length = 336
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
S+Q N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 249 SDQPANNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVNLTDRQVKI 308
Query: 370 WFQNRRMKLKR 380
WFQNRRMKLK+
Sbjct: 309 WFQNRRMKLKK 319
>gi|42734369|ref|NP_571195.1| homeobox protein Hox-B8a [Danio rerio]
gi|60392412|sp|Q8AWZ0.1|HXB8A_DANRE RecName: Full=Homeobox protein Hox-B8a; Short=Hox-B8
gi|26984634|emb|CAD59111.1| SI:dZ254O17.1 (homeo box protein B8a) [Danio rerio]
gi|31419284|gb|AAH53287.1| Homeo box B8a [Danio rerio]
Length = 245
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+ +
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 206
Query: 383 ---PDMVVEYVKESSEARSASQKTNHQSAPAD 411
P E + E R Q + QSA D
Sbjct: 207 DKFPSSKSEQEQIEKEKREKEQASGTQSAGED 238
>gi|410952520|ref|XP_003982927.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Felis catus]
gi|410952522|ref|XP_003982928.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Felis catus]
Length = 441
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|170649676|gb|ACB21261.1| homeobox A3 isoform a (predicted) [Callicebus moloch]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|73976155|ref|XP_864544.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Canis lupus
familiaris]
Length = 442
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 380 R 380
+
Sbjct: 249 K 249
>gi|395830940|ref|XP_003788570.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Otolemur garnettii]
gi|395830942|ref|XP_003788571.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Otolemur garnettii]
gi|202070725|gb|ACH95313.1| homeobox A3 isoform a (predicted) [Otolemur garnettii]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|184185534|gb|ACC68935.1| homeobox A3 isoform a (predicted) [Rhinolophus ferrumequinum]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|88604724|gb|ABD46733.1| homeobox protein ultrabithorax [Endeis spinosa]
Length = 273
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 10/117 (8%)
Query: 297 SQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVL 356
S P P P+S + + N L+ R RQ Y+ +Q +ELEKEF +YL RR +
Sbjct: 149 SMAPPPHPNSFYPWMALAGANGLR---RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEM 205
Query: 357 SKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKE--SSEARSASQKTNHQSAPAD 411
+ L LTERQIKIWFQNRRMKLK+ ++ +KE E ++ KT++QS+ D
Sbjct: 206 AHALCLTERQIKIWFQNRRMKLKKE-----IQAIKELNDQEKQAHKTKTSNQSSRQD 257
>gi|259013342|ref|NP_001158379.1| homeobox 3 [Saccoglossus kowalevskii]
gi|32307779|gb|AAP79286.1| hox 3 [Saccoglossus kowalevskii]
Length = 275
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 40/60 (66%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R + + Q+VELEKEFR YL RR LS L LTERQIK+WFQNRRMK K+ D
Sbjct: 137 RMRTNFCTAQLVELEKEFRFNRYLQKQRRTELSSVLNLTERQIKVWFQNRRMKFKKEMKD 196
>gi|410896784|ref|XP_003961879.1| PREDICTED: homeobox protein Hox-D10a-like [Takifugu rubripes]
Length = 335
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
S+Q N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 248 SDQPANNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVNLTDRQVKI 307
Query: 370 WFQNRRMKLKR 380
WFQNRRMKLK+
Sbjct: 308 WFQNRRMKLKK 318
>gi|334349107|ref|XP_003342150.1| PREDICTED: homeobox protein Hox-A7-like [Monodelphis domestica]
Length = 226
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>gi|2352536|gb|AAB69194.1| LOX20 homeodomain protein [Helobdella triserialis]
Length = 321
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ HQ +ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ HP+
Sbjct: 22 RTRTSYTRHQTLELEKEFHFNRYLSRRRRIEIAHVLNLSERQIKIWFQNRRMKWKKDHPN 81
>gi|167233978|ref|NP_001038090.1| zerknullt-related [Tribolium castaneum]
gi|13241684|gb|AAK16425.1|AF321227_5 Zen2 [Tribolium castaneum]
gi|270002808|gb|EEZ99255.1| zerknullt-2 [Tribolium castaneum]
Length = 292
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
N R R Y+S Q+VELE+EF + YL RR +++ L LTERQIKIWFQNRRMK K+
Sbjct: 104 NGKRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRMKFKKE 163
Query: 382 HPDMVVEYVKESSEARSASQKT--NHQSAP 409
+ VV +EA + Q T N+ ++P
Sbjct: 164 EKNKVVTPKTSPNEASMSPQSTSSNNSASP 193
>gi|426355738|ref|XP_004045265.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Gorilla gorilla
gorilla]
gi|426355740|ref|XP_004045266.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Gorilla gorilla
gorilla]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|284005059|ref|NP_001164870.1| homeobox protein Hox-A3 [Oryctolagus cuniculus]
gi|217418306|gb|ACK44308.1| homeobox A3 isoform a (predicted) [Oryctolagus cuniculus]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|226822847|gb|ACO83082.1| homeobox A3 isoform a (predicted) [Dasypus novemcinctus]
Length = 441
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|3237299|gb|AAC23705.1| HOXA-9B [Homo sapiens]
Length = 268
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 184 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 239
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 240 NLTERQVKIWFQNRRMKMKKINKD 263
>gi|6754234|ref|NP_034585.1| homeobox protein Hox-A7 [Mus musculus]
gi|1346331|sp|P02830.2|HXA7_MOUSE RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox-1.1; AltName: Full=Homeobox protein M6-12;
Short=M6
gi|664758|gb|AAC52160.1| Hoxa7 [Mus musculus]
gi|26329169|dbj|BAC28323.1| unnamed protein product [Mus musculus]
gi|124297803|gb|AAI31979.1| Homeo box A7 [Mus musculus]
gi|124376130|gb|AAI32644.1| Homeo box A7 [Mus musculus]
gi|148666246|gb|EDK98662.1| homeobox A7, isoform CRA_c [Mus musculus]
Length = 229
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>gi|296209383|ref|XP_002751498.1| PREDICTED: homeobox protein Hox-A3 [Callithrix jacchus]
gi|167427226|gb|ABZ80207.1| homeobox A3 isoform a (predicted) [Callithrix jacchus]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|18042103|gb|AAL57830.1|AF452568_1 homeodomain transcription factor Zen2 [Tribolium castaneum]
Length = 243
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
N R R Y+S Q+VELE+EF + YL RR +++ L LTERQIKIWFQNRRMK K+
Sbjct: 84 NGKRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRMKFKKE 143
Query: 382 HPDMVVEYVKESSEARSASQKT--NHQSAP 409
+ VV +EA + Q T N+ ++P
Sbjct: 144 EKNKVVTPKTSPNEASMSPQSTSSNNSASP 173
>gi|170649680|gb|ACB21265.1| homeobox A7 (predicted) [Callicebus moloch]
Length = 229
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|345323600|ref|XP_001509421.2| PREDICTED: homeobox protein Hox-A9-like [Ornithorhynchus anatinus]
Length = 271
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 187 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 242
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 243 NLTERQVKIWFQNRRMKMKKINKD 266
>gi|30585409|gb|AAP36977.1| Homo sapiens homeo box A3 [synthetic construct]
gi|61370826|gb|AAX43558.1| homeobox A3 [synthetic construct]
gi|61370831|gb|AAX43559.1| homeobox A3 [synthetic construct]
Length = 444
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|281182381|ref|NP_001162535.1| homeobox protein Hox-A3 [Papio anubis]
gi|160904217|gb|ABX52201.1| homeobox A3, isoform 2 (predicted) [Papio anubis]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|109067067|ref|XP_001092102.1| PREDICTED: homeobox protein Hox-A3-like isoform 4 [Macaca mulatta]
gi|109067069|ref|XP_001092226.1| PREDICTED: homeobox protein Hox-A3-like isoform 5 [Macaca mulatta]
gi|355560740|gb|EHH17426.1| hypothetical protein EGK_13833 [Macaca mulatta]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|55628352|ref|XP_527698.1| PREDICTED: homeobox protein Hox-A3 isoform 6 [Pan troglodytes]
gi|114612529|ref|XP_001162505.1| PREDICTED: homeobox protein Hox-A3 isoform 4 [Pan troglodytes]
gi|397472861|ref|XP_003807952.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Pan paniscus]
gi|397472863|ref|XP_003807953.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Pan paniscus]
gi|410254236|gb|JAA15085.1| homeobox A3 [Pan troglodytes]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|307213515|gb|EFN88924.1| Homeotic protein deformed [Harpegnathos saltator]
Length = 531
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ HQI+ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 317 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLTERQIKIWFQNRRMKWKKDH 374
>gi|165873667|gb|ABY67958.1| lox4 hox protein [Capitella teleta]
Length = 257
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF+ +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 165 RGRQTYSRYQTLELEKEFQFNHYLTRKRRIEIAHALCLTERQIKIWFQNRRMKLKK 220
>gi|193786467|dbj|BAG51750.1| unnamed protein product [Homo sapiens]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|38004412|gb|AAR07505.1| Abd-A-like protein [Schistosoma mansoni]
Length = 718
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF+ ++YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 515 RGRQTYSRYQTLELEKEFQYSHYLTRRRRIEIAHNLCLTERQIKIWFQNRRMKLKK 570
>gi|13562112|ref|NP_109377.1| homeobox protein Hox-A3 isoform a [Homo sapiens]
gi|24497513|ref|NP_705895.1| homeobox protein Hox-A3 isoform a [Homo sapiens]
gi|6016293|sp|O43365.1|HXA3_HUMAN RecName: Full=Homeobox protein Hox-A3; AltName: Full=Homeobox
protein Hox-1E
gi|15929500|gb|AAH15180.1| Homeobox A3 [Homo sapiens]
gi|41350073|gb|AAS00376.1| unknown [Homo sapiens]
gi|51094981|gb|EAL24225.1| homeo box A3 [Homo sapiens]
gi|119614271|gb|EAW93865.1| homeobox A3, isoform CRA_a [Homo sapiens]
gi|119614272|gb|EAW93866.1| homeobox A3, isoform CRA_a [Homo sapiens]
gi|123980138|gb|ABM81898.1| homeobox A3 [synthetic construct]
gi|123994943|gb|ABM85073.1| homeobox A3 [synthetic construct]
gi|208966490|dbj|BAG73259.1| homeobox A3 [synthetic construct]
gi|208968495|dbj|BAG74086.1| homeobox A3 [synthetic construct]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|403288101|ref|XP_003935253.1| PREDICTED: homeobox protein Hox-A3 [Saimiri boliviensis
boliviensis]
Length = 416
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 161 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 220
Query: 380 R 380
+
Sbjct: 221 K 221
>gi|395540360|ref|XP_003772123.1| PREDICTED: homeobox protein Hox-A7 [Sarcophilus harrisii]
Length = 226
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>gi|311275746|ref|XP_003134890.1| PREDICTED: homeobox protein Hox-A3 [Sus scrofa]
Length = 443
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|290760390|gb|ADD54564.1| HOXD10 [Boa constrictor]
Length = 361
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 309 TYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQI 367
T S+ N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+
Sbjct: 272 TKSDTPTSNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQV 331
Query: 368 KIWFQNRRMKLKR 380
KIWFQNRRMKLK+
Sbjct: 332 KIWFQNRRMKLKK 344
>gi|309313|gb|AAA37833.1| hox-1.1 peptide [Mus musculus]
Length = 229
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>gi|213511991|ref|NP_001133046.1| homeobox protein HoxB8aa [Salmo salar]
gi|157816083|gb|ABV82060.1| homeobox protein HoxB8aa [Salmo salar]
Length = 245
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK KR
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKR 202
>gi|259013344|ref|NP_001158380.1| homeobox 7 [Saccoglossus kowalevskii]
gi|116294310|gb|AAP79287.2| hox 7 [Saccoglossus kowalevskii]
Length = 263
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR LS LGLTERQIKIWFQNRRMK K+
Sbjct: 154 RCRQTYTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKK 209
>gi|207452734|ref|NP_001129067.1| homeobox protein Hox-A7 [Pan troglodytes]
gi|146324919|sp|A2T7F3.1|HXA7_PANTR RecName: Full=Homeobox protein Hox-A7
gi|124111397|gb|ABM92108.1| HOXA7 [Pan troglodytes]
Length = 230
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|311275740|ref|XP_003134888.1| PREDICTED: homeobox protein Hox-A7-like [Sus scrofa]
Length = 234
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|344270291|ref|XP_003406979.1| PREDICTED: homeobox protein Hox-A7-like [Loxodonta africana]
Length = 236
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|10714|emb|CAA31546.1| homeo domain protein [Tripneustes gratilla]
Length = 127
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 42/62 (67%)
Query: 319 LQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKL 378
L+ R RQ Y+ +Q +ELEKEF YL RR LS LGLTERQIKIWFQNRRMK
Sbjct: 5 LEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKY 64
Query: 379 KR 380
K+
Sbjct: 65 KK 66
>gi|348564406|ref|XP_003467996.1| PREDICTED: homeobox protein Hox-A3-like [Cavia porcellus]
Length = 444
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|109473519|ref|XP_001058923.1| PREDICTED: homeobox protein Hox-A3 [Rattus norvegicus]
gi|392347312|ref|XP_003749795.1| PREDICTED: homeobox protein Hox-A3 [Rattus norvegicus]
gi|392356111|ref|XP_003752226.1| PREDICTED: homeobox protein Hox-A3-like [Rattus norvegicus]
gi|149033359|gb|EDL88160.1| rCG52387, isoform CRA_a [Rattus norvegicus]
Length = 444
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 380 R 380
+
Sbjct: 249 K 249
>gi|397472859|ref|XP_003807951.1| PREDICTED: homeobox protein Hox-A7 [Pan paniscus]
Length = 230
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|410215418|gb|JAA04928.1| homeobox A7 [Pan troglodytes]
gi|410339189|gb|JAA38541.1| homeobox A7 [Pan troglodytes]
Length = 230
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|326921913|ref|XP_003207198.1| PREDICTED: homeobox protein Hox-A4-like, partial [Meleagris
gallopavo]
Length = 134
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 284 LSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFR 343
LSS D+PS +P P + ++ N R R Y+ Q++ELEKEF
Sbjct: 1 LSSNDDVPS------LPPFSPLRVAVGARSVNPNYSGGEPKRSRTAYTRQQVLELEKEFH 54
Query: 344 LTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH--PDMVVEYVKESSEA-RSAS 400
YL RR ++ L L+ERQ+KIWFQNRRMK K+ H P+ + + S + A
Sbjct: 55 FNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNQPSLGQQQAK 114
Query: 401 QKTNHQSAPADTSAPNT 417
+T P D +APN
Sbjct: 115 AQTQGHPRPLDGAAPNA 131
>gi|255755647|dbj|BAH96549.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 154 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKK 209
>gi|158711670|ref|NP_001102703.2| homeobox protein Hox-A7 [Rattus norvegicus]
gi|392347330|ref|XP_003749804.1| PREDICTED: homeobox protein Hox-A7-like [Rattus norvegicus]
gi|392356117|ref|XP_003752229.1| PREDICTED: homeobox protein Hox-A7-like [Rattus norvegicus]
Length = 229
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>gi|213515180|ref|NP_001135136.1| homeobox protein HoxC10aa [Salmo salar]
gi|157815936|gb|ABV81987.1| homeobox protein HoxC10aa [Salmo salar]
gi|158702325|gb|ABW77516.1| homeobox protein HoxC10aa [Salmo salar]
Length = 344
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L+ +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 263 NWLKAKSGRKKRCPYTKHQTLELEKEFLYNMYLSRERRLEISKSIDLTDRQVKIWFQNRR 322
Query: 376 MKLKR 380
MKLK+
Sbjct: 323 MKLKK 327
>gi|301754119|ref|XP_002912921.1| PREDICTED: homeobox protein Hox-A3-like [Ailuropoda melanoleuca]
Length = 324
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 69 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 128
Query: 380 R 380
+
Sbjct: 129 K 129
>gi|254692754|dbj|BAH23872.2| transcription factor Hox3 [Balanoglossus misakiensis]
Length = 283
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R +S+ Q+VELEKEFR YL RR+ LS L LTERQ+K+WFQNRRMK K+
Sbjct: 139 RMRSNFSTAQLVELEKEFRFNRYLQKSRREELSVILNLTERQVKVWFQNRRMKFKK 194
>gi|116003871|ref|NP_001070293.1| homeobox protein Hox-A3 [Bos taurus]
gi|122132253|sp|Q08DG7.1|HXA3_BOVIN RecName: Full=Homeobox protein Hox-A3
gi|115304899|gb|AAI23760.1| Homeobox A3 [Bos taurus]
gi|296488434|tpg|DAA30547.1| TPA: homeobox protein Hox-A3 [Bos taurus]
Length = 442
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 R 380
+
Sbjct: 248 K 248
>gi|24497556|ref|NP_008827.2| homeobox protein Hox-A7 [Homo sapiens]
gi|311033439|sp|P31268.3|HXA7_HUMAN RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox 1.1; AltName: Full=Homeobox protein Hox-1A
gi|51094977|gb|EAL24221.1| homeo box A7 [Homo sapiens]
gi|119614283|gb|EAW93877.1| homeobox A7 [Homo sapiens]
gi|147897929|gb|AAI40402.1| Homeobox A7 [synthetic construct]
gi|151555121|gb|AAI48693.1| Homeobox A7 [synthetic construct]
Length = 230
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|400180324|gb|AFP73292.1| Hoxa9alpha [Polyodon spathula]
Length = 254
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L ++ R ++ Y+ HQ +ELEKEF YL DRR ++++L LTERQ+KIW
Sbjct: 176 NNPAANWLHASSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYQVARQLSLTERQVKIW 235
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 236 FQNRRMKMKKINKD 249
>gi|46275824|ref|NP_034582.1| homeobox protein Hox-A3 [Mus musculus]
gi|2811092|sp|P02831.2|HXA3_MOUSE RecName: Full=Homeobox protein Hox-A3; AltName: Full=Homeobox
protein Hox-1.5; AltName: Full=Homeobox protein MO-10
gi|1888441|emb|CAA72404.1| homeobox-containing transcription factor [Mus musculus]
gi|66794501|gb|AAH96612.1| Homeo box A3 [Mus musculus]
gi|148666235|gb|EDK98651.1| homeobox A3, isoform CRA_a [Mus musculus]
gi|148666236|gb|EDK98652.1| homeobox A3, isoform CRA_a [Mus musculus]
Length = 443
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 380 R 380
+
Sbjct: 249 K 249
>gi|297680780|ref|XP_002818146.1| PREDICTED: homeobox protein Hox-A7 [Pongo abelii]
Length = 230
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|2739071|gb|AAB94604.1| homeobox transcription factor HOXA7 [Homo sapiens]
gi|3097078|emb|CAA06713.1| hoxA7 [Homo sapiens]
gi|208966494|dbj|BAG73261.1| homeobox A7 [synthetic construct]
Length = 230
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|1778588|gb|AAB40867.1| homeodomain protein HoxA9 [Homo sapiens]
Length = 271
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++
Sbjct: 187 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLF 242
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 243 NLTERQVKIWFQNRRMKMKKINKD 266
>gi|355694995|gb|AER99858.1| homeobox A3 [Mustela putorius furo]
Length = 417
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 162 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 221
Query: 380 R 380
+
Sbjct: 222 K 222
>gi|386783917|gb|AFJ24853.1| hypothetical protein, partial [Schmidtea mediterranea]
Length = 193
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 318 LLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMK 377
L+ ++ R R Y+ QI+ELEKEF YL RR +++ L L+ERQ+KIWFQNRRMK
Sbjct: 62 LILSDSKRNRTAYTRQQILELEKEFHFNKYLTRKRRIEIAQSLQLSERQVKIWFQNRRMK 121
Query: 378 LKRTH------PDMVVEYVKESSEARSASQKTNHQS 407
K+ H + EY+ +S SAS + N S
Sbjct: 122 WKKDHHLPGNKQRLSTEYLNSNSNHTSASFQENSTS 157
>gi|6918885|emb|CAA59270.1| HOX 1.1 (A7) [Homo sapiens]
Length = 229
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>gi|119614284|gb|EAW93878.1| hCG39031, isoform CRA_a [Homo sapiens]
Length = 185
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 101 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 156
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 157 NLTERQVKIWFQNRRMKMKKINKD 180
>gi|254692762|dbj|BAH23876.2| transcription factor Hox7 [Balanoglossus misakiensis]
Length = 246
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR LS LGLTERQIKIWFQNRRMK K+
Sbjct: 150 RCRQTYTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKK---- 205
Query: 385 MVVEYVKESSEARSASQ 401
E K+ SE S +Q
Sbjct: 206 ---ESKKDDSETGSDTQ 219
>gi|296209379|ref|XP_002751497.1| PREDICTED: homeobox protein Hox-A7 [Callithrix jacchus]
gi|167427229|gb|ABZ80210.1| homeobox A7 (predicted) [Callithrix jacchus]
Length = 230
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|166429524|ref|NP_001107631.1| abdominal A isoform S [Bombyx mori]
gi|164682498|gb|ABY66346.1| homeobox protein [Bombyx mori]
gi|225637156|dbj|BAH30153.1| abdominal-A [Bombyx mori]
Length = 347
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 291 PSNLDLSQIPKPPPSSSHTYSNQIHKNLLQ-------CNTGRFRQVYSSHQIVELEKEFR 343
PS L +IP+ P S + N + + C R RQ Y+ Q +ELEKEF
Sbjct: 183 PSAQTLPEIPRYPWMSITDWMNPFDRVVCGEFNGPNGCPRRRGRQTYTRFQTLELEKEFH 242
Query: 344 LTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 243 FNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 279
>gi|426372796|ref|XP_004053302.1| PREDICTED: homeobox protein Hox-C10 [Gorilla gorilla gorilla]
Length = 387
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 306 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 365
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 366 MKLKKMN 372
>gi|397521951|ref|XP_003831046.1| PREDICTED: homeobox protein Hox-C10 [Pan paniscus]
Length = 342
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|11037556|gb|AAG27630.1|AF298185_1 homeodomain protein Hoxc10 long form [Ambystoma mexicanum]
Length = 325
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 244 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 303
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 304 MKLKKMN 310
>gi|363746028|ref|XP_001233806.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-C10 [Gallus
gallus]
Length = 354
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 286 SEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRL 344
+EK++ N D S + + N L +GR ++ Y+ HQ +ELEKEF
Sbjct: 242 AEKELNKNTDTSTDNSDNEAKEDIKAENTTGNWLTAKSGRKKRCPYTKHQTLELEKEFLF 301
Query: 345 TNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
YL +RR +SK + LT+RQ+KIWFQNRRMKLK+ +
Sbjct: 302 NMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMN 339
>gi|404351677|ref|NP_001258236.1| homeobox C10 [Xenopus (Silurana) tropicalis]
Length = 351
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 270 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 329
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 330 MKLKKMN 336
>gi|7527478|gb|AAF63162.1|AF237818_1 fushi tarazu-like protein [Archegozetes longisetosus]
Length = 278
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 198 RTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKAKK 253
>gi|403287989|ref|XP_003935200.1| PREDICTED: homeobox protein Hox-A7 [Saimiri boliviensis
boliviensis]
Length = 229
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|291290871|ref|NP_001167466.1| homeobox D4 [Xenopus laevis]
gi|83405607|gb|AAI10766.1| Unknown (protein for MGC:131092) [Xenopus laevis]
Length = 237
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 286 SEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEK 340
S++ P N L + PP+ + + ++H N + N TG R R Y+ Q++ELEK
Sbjct: 109 SQQQHPKNGTLGK----PPAIVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEK 164
Query: 341 EFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
EF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 165 EFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDH 206
>gi|254692760|dbj|BAH23875.2| transcription factor Hox6 [Balanoglossus misakiensis]
Length = 240
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 153 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKK 208
>gi|121483830|gb|ABM54209.1| HOXC10 [Pan paniscus]
Length = 281
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 200 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 259
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 260 MKLKKMN 266
>gi|449266116|gb|EMC77226.1| Homeobox protein Hox-C10 [Columba livia]
Length = 354
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 273 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 332
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 333 MKLKKMN 339
>gi|165873663|gb|ABY67956.1| sex combs reduced hox protein [Capitella teleta]
Length = 197
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIV 336
G G S S S E P++ + P P I + + R R Y+ HQ +
Sbjct: 59 GPGGS-SHSDEPQSPTDEGAAGSPNQPHIYPWMKRMHIGHDTSNADNKRTRTSYTRHQTL 117
Query: 337 ELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEA 396
ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H K + A
Sbjct: 118 ELEKEFHFNRYLTRRRRIEIAHSLNLTERQIKIWFQNRRMKWKKEH--------KLAHLA 169
Query: 397 RSASQKTNHQSAP 409
+S +QK + AP
Sbjct: 170 KSQAQKLDLHGAP 182
>gi|359065267|ref|XP_003586096.1| PREDICTED: homeobox protein Hox-C10-like [Bos taurus]
Length = 325
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 271 QVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHK-----NLLQCNTGR 325
+ +++L L SEKD D S P +S + +I N L +GR
Sbjct: 198 KTEQNLAGPKGSPLESEKDRAKTADSS-----PDTSDNEAKEEIKAENTTGNWLTAKSGR 252
Query: 326 FRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRRMKLK+ +
Sbjct: 253 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMN 310
>gi|114644446|ref|XP_509105.2| PREDICTED: homeobox protein Hox-C10 isoform 2 [Pan troglodytes]
gi|410046600|ref|XP_003952225.1| PREDICTED: homeobox protein Hox-C10 isoform 1 [Pan troglodytes]
gi|410217892|gb|JAA06165.1| homeobox C10 [Pan troglodytes]
Length = 342
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|520620|emb|CAA84520.1| Hox-8 homeodomain protein [Branchiostoma floridae]
gi|745780|prf||2016458G Hox-8 gene
Length = 88
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMKLK+
Sbjct: 5 RGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKK 60
>gi|109944933|dbj|BAE96994.1| Ultrabithorax [Moina macrocopa]
Length = 336
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 247 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE--- 303
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPN 416
++ +KE +E A+ K S+ ++ PN
Sbjct: 304 --IQAIKELNEQEKATLKGGSSSSSTSSTTPN 333
>gi|7689385|gb|AAF67759.1|AF255675_1 homeoprotein C10 [Homo sapiens]
Length = 342
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|24497533|ref|NP_059105.2| homeobox protein Hox-C10 [Homo sapiens]
gi|20141612|sp|Q9NYD6.2|HXC10_HUMAN RecName: Full=Homeobox protein Hox-C10; AltName: Full=Homeobox
protein Hox-3I
gi|12654897|gb|AAH01293.1| Homeobox C10 [Homo sapiens]
gi|32880185|gb|AAP88923.1| homeo box C10 [Homo sapiens]
gi|60654887|gb|AAX32008.1| homeobox C10 [synthetic construct]
gi|60654889|gb|AAX32009.1| homeobox C10 [synthetic construct]
gi|119617144|gb|EAW96738.1| homeobox C10, isoform CRA_a [Homo sapiens]
gi|189053991|dbj|BAG36498.1| unnamed protein product [Homo sapiens]
gi|208968505|dbj|BAG74091.1| homeobox C10 [synthetic construct]
gi|325464241|gb|ADZ15891.1| homeobox C10 [synthetic construct]
Length = 342
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|120974125|gb|ABM46643.1| HOXA3 [Gorilla gorilla]
Length = 267
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 12 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 71
Query: 380 R 380
+
Sbjct: 72 K 72
>gi|23397672|ref|NP_055436.2| homeobox protein Hox-D4 [Homo sapiens]
gi|20141491|sp|P09016.3|HXD4_HUMAN RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein HHO.C13; AltName: Full=Homeobox protein Hox-4B;
AltName: Full=Homeobox protein Hox-5.1
gi|16876979|gb|AAH16763.1| Homeobox D4 [Homo sapiens]
gi|49904755|gb|AAH74797.1| Homeobox D4 [Homo sapiens]
gi|119631491|gb|EAX11086.1| homeobox D4 [Homo sapiens]
Length = 255
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K PS L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPSGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|151935661|gb|ABS18812.1| Hox5, partial [Flaccisagitta enflata]
Length = 335
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%)
Query: 319 LQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKL 378
L + R RQ Y+ HQ +ELEKEF YL RR + LGLTERQIKIWFQNRRMK
Sbjct: 199 LGIDQKRTRQTYTRHQTLELEKEFHFNRYLTRRRRIEIVHALGLTERQIKIWFQNRRMKW 258
Query: 379 KR 380
K+
Sbjct: 259 KK 260
>gi|332207726|ref|XP_003252947.1| PREDICTED: homeobox protein Hox-C10 [Nomascus leucogenys]
Length = 342
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|220898184|gb|ACL81440.1| HoxA9 [Latimeria menadoensis]
Length = 261
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 267 AHLQQVQKDLGLGAS----DSLSSEKDIPSNLDLSQI--PKPPPSSSHTYSNQIHKNLLQ 320
AH D G G+S + +S+ +P N S+ KP ++ +N +H
Sbjct: 137 AHTLTFSADYGCGSSPVEKEKNTSDGILPENNGESESIGDKPQIDPNNPAANWLHAR--- 193
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+T + R Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 194 -STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 252
Query: 381 THPD 384
+ D
Sbjct: 253 INKD 256
>gi|1008448|gb|AAA78790.1| HOX-1.7 protein, partial [Mus musculus]
Length = 92
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 8 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 63
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 64 NLTERQVKIWFQNRRMKMKKINKD 87
>gi|395744372|ref|XP_002823402.2| PREDICTED: homeobox protein Hox-C10 [Pongo abelii]
Length = 342
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|325260871|gb|ADZ04661.1| homeobox C10 [Notophthalmus viridescens]
Length = 360
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 279 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 338
Query: 376 MKLKR 380
MKLK+
Sbjct: 339 MKLKK 343
>gi|332692485|gb|AEE90165.1| Homeobox B9a [Anguilla anguilla]
gi|385654476|gb|AFI61977.1| Hox-B9a [Anguilla japonica]
Length = 249
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L + R ++ Y+ +Q +ELEKEF YL DRR +S++L LTERQ+KIW
Sbjct: 172 NDPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVSRQLNLTERQVKIW 231
Query: 371 FQNRRMKLKRTHPDMVVE 388
FQNRRMK+K+ + D E
Sbjct: 232 FQNRRMKMKKMNKDQAKE 249
>gi|30585353|gb|AAP36949.1| Homo sapiens homeo box C10 [synthetic construct]
gi|61371438|gb|AAX43667.1| homeobox C10 [synthetic construct]
Length = 343
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|332024142|gb|EGI64358.1| Homeotic protein ultrabithorax [Acromyrmex echinatior]
Length = 331
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEF 342
SL+S P L Q P+S+HT+ + R RQ Y+ +Q +ELEKEF
Sbjct: 196 SLNSSASQPVATQLHQ----QPTSNHTFYPWMAIAGANGMRRRGRQTYTRYQTLELEKEF 251
Query: 343 RLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 252 HTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 289
>gi|255755641|dbj|BAH96546.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 280
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
N R R +S+ Q+VELEKEFR YL RR+ LS L LTERQ+K+WFQNRRMK K+
Sbjct: 134 NPKRMRSNFSTAQLVELEKEFRFNRYLQKSRREELSVILNLTERQVKVWFQNRRMKFKK 192
>gi|224045296|ref|XP_002194899.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Taeniopygia guttata]
Length = 413
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 170 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 229
Query: 380 R 380
+
Sbjct: 230 K 230
>gi|297465046|ref|XP_002703632.1| PREDICTED: homeobox protein Hox-D3 [Bos taurus]
gi|297471594|ref|XP_002685351.1| PREDICTED: homeobox protein Hox-D3 [Bos taurus]
gi|296490672|tpg|DAA32785.1| TPA: homeobox D3-like [Bos taurus]
Length = 434
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 198 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 253
>gi|359754090|gb|AEV59513.1| HOXA9 [Macropus eugenii]
Length = 261
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 282 DSLSSEKDIP-SNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEK 340
D SE P +N D PP + +N +H +T + R Y+ HQ +ELEK
Sbjct: 157 DKQPSEGAFPENNGDCEAGGDKPPIDPNPAANWLHAR----STRKKRCPYTKHQTLELEK 212
Query: 341 EFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
EF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 213 EFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 256
>gi|311272694|ref|XP_003133547.1| PREDICTED: homeobox protein Hox-D3 [Sus scrofa]
Length = 432
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|290760361|gb|ADD54542.1| HOXD10 [Pantherophis guttatus]
Length = 365
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 284 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 343
Query: 376 MKLKR 380
MKLK+
Sbjct: 344 MKLKK 348
>gi|88604718|gb|ABD46730.1| homeobox protein fushi tarazu [Endeis spinosa]
Length = 302
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGL+ERQIKIWFQNRRMK K+
Sbjct: 210 RTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKAKK 265
>gi|259013408|ref|NP_001158411.1| homeobox 6 [Saccoglossus kowalevskii]
gi|116574504|gb|ABK00020.1| hox 6 [Saccoglossus kowalevskii]
Length = 242
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 150 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLGLTERQIKIWFQNRRMKWKK 205
>gi|449268330|gb|EMC79199.1| Homeobox protein Hox-A3 [Columba livia]
Length = 413
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 170 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 229
Query: 380 R 380
+
Sbjct: 230 K 230
>gi|385654469|gb|AFI61971.1| Hox-A9b [Anguilla japonica]
Length = 258
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
SN +H +T + R YS HQ +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 184 SNWLHAR----STRKKRCPYSKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 239
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 240 FQNRRMKMKKGNKD 253
>gi|327283061|ref|XP_003226260.1| PREDICTED: hypothetical protein LOC100565849 [Anolis carolinensis]
Length = 540
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 451 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHGLGLTERQVKIWFQNRRMKWKK 506
>gi|149705657|ref|XP_001499535.1| PREDICTED: homeobox protein Hox-A7-like [Equus caballus]
Length = 234
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|31418381|gb|AAH53405.1| Hoxc10 protein [Mus musculus]
Length = 342
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|403258696|ref|XP_003921887.1| PREDICTED: homeobox protein Hox-D3 [Saimiri boliviensis
boliviensis]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|160774375|gb|AAI55299.1| Hoxb10a protein [Danio rerio]
Length = 214
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 286 SEKDI-PSNL--DLSQIPKPPPSSSHTYSNQIHKN-LLQCNTGRFRQV-YSSHQIVELEK 340
S+ DI P+NL D ++ K P + + + N L GR ++ YS HQI+ELEK
Sbjct: 99 SKDDIEPNNLQTDFTRGDKTPREKTQDVTLENAANGWLSAKAGRKKRCPYSKHQILELEK 158
Query: 341 EFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
EF YL +RR +S+ + LT+RQ+KIWFQNRRMKLK+
Sbjct: 159 EFLFNMYLTRERRLEISRSINLTDRQVKIWFQNRRMKLKK 198
>gi|392341718|ref|XP_003754408.1| PREDICTED: homeobox protein Hox-C10 [Rattus norvegicus]
gi|392349758|ref|XP_003750462.1| PREDICTED: homeobox protein Hox-C10 [Rattus norvegicus]
gi|149031895|gb|EDL86807.1| homeo box C10, isoform CRA_b [Rattus norvegicus]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|410934533|gb|AFV93983.1| homeodomain-containing protein Hox8, partial [Branchiostoma
lanceolatum]
Length = 100
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMKLK+
Sbjct: 18 RGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKKEAAM 77
Query: 385 MV---VEYVKESSEARS 398
+ VE ++SS+ +S
Sbjct: 78 LCPPKVEETEKSSDGQS 94
>gi|348581053|ref|XP_003476292.1| PREDICTED: homeobox protein Hox-C10-like [Cavia porcellus]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|301776114|ref|XP_002923475.1| PREDICTED: homeobox protein Hox-C10-like [Ailuropoda melanoleuca]
gi|281342175|gb|EFB17759.1| hypothetical protein PANDA_012610 [Ailuropoda melanoleuca]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|277349090|ref|NP_001162171.1| ultrabithorax [Apis mellifera]
gi|269979254|gb|ACZ56139.1| ultrabithorax [Apis mellifera]
Length = 330
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 233 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKK 288
>gi|410964579|ref|XP_003988831.1| PREDICTED: homeobox protein Hox-C10 [Felis catus]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|344268818|ref|XP_003406253.1| PREDICTED: homeobox protein Hox-D3 [Loxodonta africana]
Length = 430
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 194 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 249
>gi|26328901|dbj|BAC28189.1| unnamed protein product [Mus musculus]
Length = 312
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 231 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 290
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 291 MKLKKMN 297
>gi|301787251|ref|XP_002929041.1| PREDICTED: homeobox protein Hox-D3-like [Ailuropoda melanoleuca]
gi|281349083|gb|EFB24667.1| hypothetical protein PANDA_019124 [Ailuropoda melanoleuca]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|149730755|ref|XP_001500109.1| PREDICTED: homeobox protein Hox-D3 isoform 1 [Equus caballus]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|326937445|ref|NP_034592.2| homeobox protein Hox-C10 [Mus musculus]
gi|400011|sp|P31257.1|HXC10_MOUSE RecName: Full=Homeobox protein Hox-C10; AltName: Full=Homeobox
protein Hox-3.6
gi|148672001|gb|EDL03948.1| homeobox C10 [Mus musculus]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|440900715|gb|ELR51793.1| Homeobox protein Hox-C10 [Bos grunniens mutus]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 271 QVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQV- 329
+ +++L L SEKD D S + + N L +GR ++
Sbjct: 215 KTEQNLAGPKGSPLESEKDRAKTADSSPDTSDNEAKEEIKAENTTGNWLTAKSGRKKRCP 274
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRRMKLK+ +
Sbjct: 275 YTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMN 327
>gi|219880|dbj|BAA01891.1| homeodomain protein [Homo sapiens]
Length = 416
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 180 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 235
>gi|391329251|ref|XP_003739089.1| PREDICTED: uncharacterized protein LOC100908539 [Metaseiulus
occidentalis]
Length = 1486
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 1277 CPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 1336
>gi|146324927|sp|A2D635.1|HXC10_MACMU RecName: Full=Homeobox protein Hox-C10
gi|146324928|sp|A2T6F8.1|HXC10_MACNE RecName: Full=Homeobox protein Hox-C10
gi|121503160|gb|ABM55128.1| HOXC10 [Macaca mulatta]
gi|124013523|gb|ABM88006.1| HOXC10 [Macaca nemestrina]
gi|355786151|gb|EHH66334.1| Homeobox protein Hox-3I [Macaca fascicularis]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|172045557|sp|Q9YGT5.3|HXA9B_DANRE RecName: Full=Homeobox protein Hox-A9b
gi|63101870|gb|AAH95300.1| Hoxa9b protein [Danio rerio]
Length = 253
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 14/128 (10%)
Query: 261 TSSILLA----HLQQVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHK 316
T ++L+A + Q ++ + A + S ++ IP+ L P P S N +H
Sbjct: 131 THTLLVAETDNNTTQTERKVPDDAVSNGSHDEKIPAETKLDLDPNNPSS------NWLHA 184
Query: 317 NLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
+T + R Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRM
Sbjct: 185 K----STRKKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLTERQVKIWFQNRRM 240
Query: 377 KLKRTHPD 384
K+K+ + D
Sbjct: 241 KMKKCNKD 248
>gi|326921891|ref|XP_003207187.1| PREDICTED: homeobox protein Hox-A3-like [Meleagris gallopavo]
Length = 413
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 170 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 229
Query: 380 R 380
+
Sbjct: 230 K 230
>gi|391339782|ref|XP_003744226.1| PREDICTED: homeotic protein ultrabithorax-like [Metaseiulus
occidentalis]
Length = 178
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 87 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 143
Query: 385 MVVEYVKESSEARSASQKTNHQS 407
++ +KE +E +Q S
Sbjct: 144 --IQAIKELNEQERQAQAAKAAS 164
>gi|284005071|ref|NP_001164873.1| homeobox protein Hox-A7 [Oryctolagus cuniculus]
gi|217418309|gb|ACK44311.1| homeobox A7 (predicted) [Oryctolagus cuniculus]
Length = 235
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|146324929|sp|A2T7H7.1|HXC10_PONPY RecName: Full=Homeobox protein Hox-C10
gi|124054135|gb|ABM89255.1| HOXC10 [Pongo pygmaeus]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|395835043|ref|XP_003790494.1| PREDICTED: homeobox protein Hox-C10 [Otolemur garnettii]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|429510508|gb|AFZ94992.1| transcription factor Hox7 [Petromyzon marinus]
Length = 227
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 42/64 (65%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H +
Sbjct: 155 RGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHQN 214
Query: 385 MVVE 388
E
Sbjct: 215 PAAE 218
>gi|213515508|ref|NP_001133039.1| homeobox protein HoxA7ab [Salmo salar]
gi|157816061|gb|ABV82049.1| homeobox protein HoxA7ab [Salmo salar]
Length = 252
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 42/63 (66%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
N R RQ YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 125 NRKRGRQTYSRYQTLELEKEFHFNRYLNRRRRVEIAHVLCLTERQIKIWFQNRRMKWKKD 184
Query: 382 HPD 384
H D
Sbjct: 185 HKD 187
>gi|1708346|sp|P50209.1|HXA9_AMBME RecName: Full=Homeobox protein Hox-A9
gi|687784|gb|AAA86505.1| Hox-A9, partial [Ambystoma mexicanum]
Length = 143
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 275 DLGLGASDSLSSEKDIPSNLDLSQIP--KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSS 332
D G +D SSE P ++ KP ++ +N +H +T + R Y+
Sbjct: 32 DYGSSPADKQSSEGAFPEAPAETEASGDKPAIDPNNPAANWLHAR----STRKKRCPYTK 87
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 88 HQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 139
>gi|351706137|gb|EHB09056.1| Homeobox protein Hox-C10 [Heterocephalus glaber]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|345792380|ref|XP_543626.3| PREDICTED: homeobox protein Hox-C10 [Canis lupus familiaris]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|332692478|gb|AEE90159.1| Homeobox A9b [Anguilla anguilla]
Length = 258
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
SN +H +T + R YS HQ +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 184 SNWLHAR----STRKKRCPYSKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 239
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 240 FQNRRMKMKKGNKD 253
>gi|45383083|ref|NP_989879.1| homeobox protein Hox-A3 [Gallus gallus]
gi|363730026|ref|XP_003640749.1| PREDICTED: homeobox protein Hox-A3-like [Gallus gallus]
gi|3201973|gb|AAC19377.1| homeodomain protein HOXD-3 [Gallus gallus]
Length = 413
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 170 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 229
Query: 380 R 380
+
Sbjct: 230 K 230
>gi|432112561|gb|ELK35277.1| Homeobox protein Hox-C10 [Myotis davidii]
Length = 452
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 371 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 430
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 431 MKLKKMN 437
>gi|74004892|ref|XP_545539.2| PREDICTED: homeobox protein Hox-D3 [Canis lupus familiaris]
Length = 431
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 195 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 250
>gi|345780283|ref|XP_864678.2| PREDICTED: homeobox protein Hox-A7 isoform 5 [Canis lupus
familiaris]
Length = 239
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|344266079|ref|XP_003405108.1| PREDICTED: homeobox protein Hox-C10 [Loxodonta africana]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 321 MKLKKMN 327
>gi|344239248|gb|EGV95351.1| Homeobox protein Hox-C10 [Cricetulus griseus]
Length = 299
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 218 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 277
Query: 376 MKLKR 380
MKLK+
Sbjct: 278 MKLKK 282
>gi|426224348|ref|XP_004006333.1| PREDICTED: homeobox protein Hox-C10 [Ovis aries]
Length = 337
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 256 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 315
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 316 MKLKKMN 322
>gi|354490181|ref|XP_003507238.1| PREDICTED: homeobox protein Hox-C10-like [Cricetulus griseus]
Length = 312
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 231 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 290
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 291 MKLKKMN 297
>gi|154183833|gb|ABS70773.1| Hoxa10a [Haplochromis burtoni]
Length = 361
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 280 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRR 339
Query: 376 MKLKR 380
MKLK+
Sbjct: 340 MKLKK 344
>gi|298358096|ref|NP_571241.2| homeobox protein Hox-D10a [Danio rerio]
gi|306526282|sp|Q90469.4|HXDAA_DANRE RecName: Full=Homeobox protein Hox-D10a; Short=Hox-D10; AltName:
Full=Homeobox protein Hox-C10
gi|47937864|gb|AAH71329.1| Hoxd10a protein [Danio rerio]
gi|157422873|gb|AAI53659.1| Hoxd10a protein [Danio rerio]
Length = 332
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 251 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 310
Query: 376 MKLKR 380
MKLK+
Sbjct: 311 MKLKK 315
>gi|355750648|gb|EHH54975.1| hypothetical protein EGM_04093 [Macaca fascicularis]
Length = 422
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|184185536|gb|ACC68937.1| homeobox protein Hox-A7 (predicted) [Rhinolophus ferrumequinum]
Length = 232
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|395540364|ref|XP_003772125.1| PREDICTED: homeobox protein Hox-A3 [Sarcophilus harrisii]
Length = 443
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 199 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 258
Query: 380 R 380
+
Sbjct: 259 K 259
>gi|397489126|ref|XP_003815586.1| PREDICTED: homeobox protein Hox-D3 [Pan paniscus]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|974811|emb|CAA61029.1| HoxD10 [Danio rerio]
Length = 343
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 251 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVSLTDRQVKIWFQNRR 310
Query: 376 MKLKR 380
MKLK+
Sbjct: 311 MKLKK 315
>gi|395837221|ref|XP_003791539.1| PREDICTED: homeobox protein Hox-D3 [Otolemur garnettii]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|325260879|gb|ADZ04668.1| homeobox D10 [Notophthalmus viridescens]
Length = 345
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 264 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 323
Query: 376 MKLKR 380
MKLK+
Sbjct: 324 MKLKK 328
>gi|121503173|gb|ABM55137.1| HOXA3 [Macaca mulatta]
Length = 267
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 12 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 71
Query: 380 R 380
+
Sbjct: 72 K 72
>gi|121483843|gb|ABM54217.1| HOXA3 [Pan paniscus]
Length = 267
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 12 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 71
Query: 380 R 380
+
Sbjct: 72 K 72
>gi|429510516|gb|AFZ94996.1| Hox4-like protein 2 [Petromyzon marinus]
Length = 371
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 274 KDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSH 333
+ +G AS+ L+ K Q P P + N ++ N + R R Y+
Sbjct: 131 QQMGAAASNGLACSKQQ------QQQPVVYPWMKKVHVNTLNPNYTGAESKRSRTAYTRQ 184
Query: 334 QIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
Q++ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 185 QVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDH 233
>gi|426337803|ref|XP_004032886.1| PREDICTED: homeobox protein Hox-D3 [Gorilla gorilla gorilla]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|790878|gb|AAB17627.1| homeodomain protein, partial [Polycelis nigra]
Length = 79
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 40/52 (76%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
R R Y+++Q+VELEKEF NYL RR LSK+L LTERQ+KIWFQNRRM
Sbjct: 13 RCRSAYTNNQLVELEKEFHFNNYLARGRRAELSKQLLLTERQVKIWFQNRRM 64
>gi|19923391|ref|NP_008829.3| homeobox protein Hox-D3 [Homo sapiens]
gi|224471887|sp|P31249.3|HXD3_HUMAN RecName: Full=Homeobox protein Hox-D3; AltName: Full=Homeobox
protein Hox-4A
gi|1869799|emb|CAA71102.1| HOXD3 [Homo sapiens]
gi|13477301|gb|AAH05124.1| Homeobox D3 [Homo sapiens]
gi|14250648|gb|AAH08789.1| Homeobox D3 [Homo sapiens]
gi|119631490|gb|EAX11085.1| homeobox D3 [Homo sapiens]
gi|123989966|gb|ABM83900.1| homeobox D3 [synthetic construct]
gi|123999289|gb|ABM87221.1| homeobox D3 [synthetic construct]
gi|208966506|dbj|BAG73267.1| homeobox D3 [synthetic construct]
gi|208968519|dbj|BAG74098.1| homeobox D3 [synthetic construct]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|397911068|gb|AFO68810.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 144
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%)
Query: 284 LSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFR 343
L S + P + +Q+P+P P + + R RQ Y+ +Q +ELEKEF
Sbjct: 12 LPSAQGSPGSTVGAQLPQPTPPVFPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFH 71
Query: 344 LTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 72 FNKYLTRKRRIEIAHLLGLTERQIKIWFQNRRMKWKK 108
>gi|395732502|ref|XP_003776074.1| PREDICTED: homeobox protein Hox-D3 [Pongo abelii]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|359323087|ref|XP_849475.2| PREDICTED: uncharacterized protein LOC607625 [Canis lupus
familiaris]
Length = 1280
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 543 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 596
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 297 SQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVL 356
SQ P PP + + ++H + + + R R Y+ +Q +ELEKEF YL RR +
Sbjct: 1190 SQPPAPP--QIYPWMTKLHMSH-ETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 1246
Query: 357 SKELGLTERQIKIWFQNRRMKLKR 380
+ L L ERQIKIWFQNRRMK K+
Sbjct: 1247 ANNLCLNERQIKIWFQNRRMKWKK 1270
>gi|281182594|ref|NP_001162369.1| homeobox protein Hox-A7 [Papio anubis]
gi|160904220|gb|ABX52204.1| homeobox A7 (predicted) [Papio anubis]
gi|355747754|gb|EHH52251.1| hypothetical protein EGM_12667 [Macaca fascicularis]
Length = 230
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>gi|348585687|ref|XP_003478602.1| PREDICTED: homeobox protein Hox-D3-like [Cavia porcellus]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|348522809|ref|XP_003448916.1| PREDICTED: homeobox protein Hox-A10-like [Oreochromis niloticus]
Length = 378
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 297 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRR 356
Query: 376 MKLKR 380
MKLK+
Sbjct: 357 MKLKK 361
>gi|402888723|ref|XP_003907701.1| PREDICTED: homeobox protein Hox-D3 [Papio anubis]
gi|355564998|gb|EHH21487.1| hypothetical protein EGK_04567 [Macaca mulatta]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|290760373|gb|ADD54551.1| HOXD10 [Anguis fragilis]
Length = 370
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 289 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 348
Query: 376 MKLKR 380
MKLK+
Sbjct: 349 MKLKK 353
>gi|110763992|ref|XP_001120101.1| PREDICTED: homeobox protein OTX-like [Apis mellifera]
Length = 369
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 42/58 (72%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R R Y+S Q+VELEKEF +T YL RR L+ L LTERQIKIWFQNRRMK K+
Sbjct: 99 TKRSRTAYTSVQLVELEKEFTVTKYLCRPRRIELAIALSLTERQIKIWFQNRRMKYKK 156
>gi|351709859|gb|EHB12778.1| Homeobox protein Hox-D3 [Heterocephalus glaber]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|396777|emb|CAA52160.1| divergent antennapedia-class homeodomain protein [Schistocerca
gregaria]
Length = 111
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ Q +ELEKEF YL RR +S+ LGLTERQIKIWFQNRRMKLK+
Sbjct: 6 RTRQTYTRFQTLELEKEFHYNRYLTRRRRVEISQALGLTERQIKIWFQNRRMKLKK 61
>gi|6513841|gb|AAD01939.2| homeobox protein HOXA7 [Homo sapiens]
Length = 230
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQ+KIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQVKIWFQNRRMKWKKEHKD 191
>gi|410911108|ref|XP_003969032.1| PREDICTED: homeobox protein Hox-A10a-like [Takifugu rubripes]
Length = 362
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 281 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRR 340
Query: 376 MKLKR 380
MKLK+
Sbjct: 341 MKLKK 345
>gi|348519661|ref|XP_003447348.1| PREDICTED: homeobox protein Hox-D10a-like [Oreochromis niloticus]
Length = 340
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
S+ + N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 253 SDTLTNNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVNLTDRQVKI 312
Query: 370 WFQNRRMKLKRTH 382
WFQNRRMKLK+ +
Sbjct: 313 WFQNRRMKLKKMN 325
>gi|188528951|ref|NP_001120901.1| homeobox A3 [Xenopus (Silurana) tropicalis]
gi|183985812|gb|AAI66398.1| hoxa3 protein [Xenopus (Silurana) tropicalis]
Length = 406
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 161 QSSSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 220
Query: 380 R 380
+
Sbjct: 221 K 221
>gi|402478630|ref|NP_001257967.1| homeobox protein Hox-D3 [Rattus norvegicus]
Length = 432
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|224045300|ref|XP_002194850.1| PREDICTED: homeobox protein Hox-A4 [Taeniopygia guttata]
Length = 306
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R R Y+ Q++ELEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 209 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKL 268
Query: 383 PDMVVEYVKESSEARSASQKTNHQSAPADTSAPNT 417
P+ + +S+ ++ + +T P D + PN
Sbjct: 269 PNTKMRSSNQSTLSQQSKAQTQGHPHPLDGATPNA 303
>gi|359754110|gb|AEV59531.1| HOXC10 [Macropus eugenii]
Length = 342
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKR 380
MKLK+
Sbjct: 321 MKLKK 325
>gi|321475847|gb|EFX86809.1| putative homeotic HOX3 protein [Daphnia pulex]
Length = 742
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 291 RARTAYTSAQLVELEKEFHFNRYLCRPRRIEMATLLNLTERQIKIWFQNRRMKFKK 346
>gi|290760378|gb|ADD54555.1| HOXD10 [Gekko ulikovskii]
Length = 357
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 276 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 335
Query: 376 MKLKR 380
MKLK+
Sbjct: 336 MKLKK 340
>gi|154183855|gb|ABS70793.1| Hoxd10a [Haplochromis burtoni]
Length = 340
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
S+ + N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 253 SDTLTNNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVNLTDRQVKI 312
Query: 370 WFQNRRMKLKRTH 382
WFQNRRMKLK+ +
Sbjct: 313 WFQNRRMKLKKMN 325
>gi|400004|sp|P31272.1|HXB9_XENLA RecName: Full=Homeobox protein Hox-B9; AltName: Full=XlHbox-6
Length = 232
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 309 TYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQI 367
T+ N N L + R ++ YS +Q +ELEKEF+ YL DRR +++ L L+ERQ+
Sbjct: 152 THQNNPSANWLHARSSRKKRCPYSKYQTLELEKEFKFNMYLTRDRRHEVARLLNLSERQV 211
Query: 368 KIWFQNRRMKLKRTHPD 384
KIWFQNRRMK+K+ + D
Sbjct: 212 KIWFQNRRMKMKKLNKD 228
>gi|51094982|gb|EAL24226.1| homeo box A3 [Homo sapiens]
gi|193787636|dbj|BAG52842.1| unnamed protein product [Homo sapiens]
Length = 285
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 30 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 89
Query: 380 R 380
+
Sbjct: 90 K 90
>gi|426228410|ref|XP_004008302.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A3 [Ovis
aries]
Length = 492
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 73/152 (48%), Gaps = 24/152 (15%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 167 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 226
Query: 380 RTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIRE-HYE-RSAVPF 437
+ D + + SS +S S+ P ++ S + YE +S PF
Sbjct: 227 K---DQKGKGMLTSSGGQSPSRSP-------VPPGPGGYLNSMHSLVNSVPYEPQSPPPF 276
Query: 438 -----------PASQP-GEHPLATGELHGSPL 457
PAS P G T L GSP+
Sbjct: 277 SKPPQGAYGLPPASYPAGNSSYGTPHLQGSPV 308
>gi|27948456|gb|AAO25534.1| Hoxc10 [Xenopus laevis]
Length = 351
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 270 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 329
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 330 MKLKKMN 336
>gi|395540876|ref|XP_003772376.1| PREDICTED: homeobox protein Hox-C10, partial [Sarcophilus harrisii]
Length = 275
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 194 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 253
Query: 376 MKLKR 380
MKLK+
Sbjct: 254 MKLKK 258
>gi|327283055|ref|XP_003226257.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D3-like
[Anolis carolinensis]
Length = 445
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 208 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 263
>gi|147903235|ref|NP_001083948.1| homeobox C10 [Xenopus laevis]
gi|50603921|gb|AAH77298.1| Hoxc10 protein [Xenopus laevis]
Length = 351
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 270 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 329
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 330 MKLKKMN 336
>gi|395540394|ref|XP_003772140.1| PREDICTED: homeobox protein Hox-A10 [Sarcophilus harrisii]
Length = 263
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 253 SKLEEPNKTSSILLAHLQQVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSN 312
S LE P T+ LA Q ++ G +S + PS S P P
Sbjct: 124 SSLESPPPTA---LACGSQAAEEEGQASSSAAEELSPAPSE---SSKPSPEKDPIGNAKG 177
Query: 313 QIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWF 371
+ N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWF
Sbjct: 178 ENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWF 237
Query: 372 QNRRMKLKRTH 382
QNRRMKLK+ +
Sbjct: 238 QNRRMKLKKMN 248
>gi|385654513|gb|AFI62009.1| Hox-C10b [Anguilla japonica]
Length = 339
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 258 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 317
Query: 376 MKLKR 380
MKLK+
Sbjct: 318 MKLKK 322
>gi|126341821|ref|XP_001362823.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Monodelphis
domestica]
Length = 455
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 211 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 270
Query: 380 R 380
+
Sbjct: 271 K 271
>gi|487337|gb|AAB60683.1| homeobox containing protein [Mus musculus]
gi|1398929|gb|AAC52779.1| Hoxd3 [Mus musculus]
gi|1398931|gb|AAC52780.1| Hoxd3 [Mus musculus]
gi|74210733|dbj|BAE23694.1| unnamed protein product [Mus musculus]
gi|1090526|prf||2019256A Hox-D3 protein
Length = 417
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 181 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 236
>gi|426220825|ref|XP_004004612.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D3 [Ovis
aries]
Length = 421
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 197 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 252
>gi|390467743|ref|XP_002752510.2| PREDICTED: homeobox protein Hox-C10-like, partial [Callithrix
jacchus]
Length = 159
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 78 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 137
Query: 376 MKLKR 380
MKLK+
Sbjct: 138 MKLKK 142
>gi|151935659|gb|ABS18811.1| Hox4 [Flaccisagitta enflata]
Length = 288
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ HQ++ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 132 RARTAYTRHQVLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDH 189
>gi|148666245|gb|EDK98661.1| homeobox A7, isoform CRA_b [Mus musculus]
Length = 223
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 125 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 184
>gi|405976601|gb|EKC41102.1| Homeobox protein LOX2 [Crassostrea gigas]
Length = 277
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF+ +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 189 RGRQTYSRYQTLELEKEFQFNHYLTRKRRIEVAHSLCLTERQIKIWFQNRRMKLKK 244
>gi|400180337|gb|AFP73304.1| Hoxa7beta [Polyodon spathula]
Length = 210
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF + YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 130 RGRQTYTRYQTLELEKEFHFSRYLTRRRRVEVAHALCLTERQIKIWFQNRRMKWKKEHSD 189
>gi|344252747|gb|EGW08851.1| Homeobox protein Hox-A3 [Cricetulus griseus]
Length = 286
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 30 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 89
Query: 380 R 380
+
Sbjct: 90 K 90
>gi|4760772|dbj|BAA77405.1| PLOX5-Dj [Dugesia japonica]
Length = 288
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ HQ +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 189 RTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEH 246
>gi|390351581|ref|XP_003727687.1| PREDICTED: uncharacterized protein LOC100888710 [Strongylocentrotus
purpuratus]
Length = 381
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R ++S Q+VELEKEF YL RR ++K L LTERQIKIWFQNRRMK KR
Sbjct: 248 RNRTAFTSAQLVELEKEFHFNRYLCRPRRVEMAKSLNLTERQIKIWFQNRRMKYKR 303
>gi|220898200|gb|ACL81454.1| HoxC10 [Latimeria menadoensis]
Length = 339
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 258 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 317
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 318 MKLKKMN 324
>gi|443689507|gb|ELT91881.1| hypothetical protein CAPTEDRAFT_168122 [Capitella teleta]
Length = 298
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 313 QIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQ 372
I + + R R Y+ HQ +ELEKEF YL RR ++ L LTERQIKIWFQ
Sbjct: 195 HIGHDTSNADNKRTRTSYTRHQTLELEKEFHFNRYLTRRRRIEIAHSLNLTERQIKIWFQ 254
Query: 373 NRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQSAP 409
NRRMK K+ H K + A+S +QK + AP
Sbjct: 255 NRRMKWKKEH--------KLAHLAKSQAQKLDLHGAP 283
>gi|158939061|sp|O93353.2|HXA3_CHICK RecName: Full=Homeobox protein Hox-A3; AltName: Full=Homeobox
protein Hox-D3
gi|31339376|dbj|BAC77105.1| homeobox protein Hoxa3 [Gallus gallus]
Length = 413
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 170 QTSSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 229
Query: 380 R 380
+
Sbjct: 230 K 230
>gi|197311330|gb|ACH61895.1| zerknuellt [Episyrphus balteatus]
Length = 306
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R +SS+Q+++LE+EF YL RR +S+ L L+ERQ+KIWFQNRRMK K+
Sbjct: 27 RARTAFSSNQLIQLEREFHTNKYLCRPRRIEISQRLELSERQVKIWFQNRRMKSKKDAAR 86
Query: 385 MVVEYVKESSEARSASQKTNHQSAPA 410
+ +Y+K + S S + N SAP
Sbjct: 87 GITDYIKFRPSSDSGSSRGN--SAPV 110
>gi|354474845|ref|XP_003499640.1| PREDICTED: hypothetical protein LOC100761150 [Cricetulus griseus]
Length = 364
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 268 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 323
>gi|332692470|gb|AEE90152.1| Homeobox A7a [Anguilla anguilla]
Length = 236
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 135 RGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDH 192
>gi|109944916|dbj|BAE96984.1| Ultrabithorax [Daphnia magna]
gi|109944919|dbj|BAE96986.1| Ultrabithorax [Daphnia magna]
gi|109944927|dbj|BAE96990.1| Ultrabithorax [Daphnia magna]
gi|109944930|dbj|BAE96992.1| Ultrabithorax [Daphnia magna]
Length = 369
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 278 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 334
Query: 385 MVVEYVKESSEARSAS 400
++ +KE +E AS
Sbjct: 335 --IQAIKELNEQDKAS 348
>gi|1574924|gb|AAB09403.1| hox-type homeodomain protein, partial [Heliocidaris erythrogramma]
Length = 126
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 42/62 (67%)
Query: 319 LQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKL 378
L+ R RQ Y+ +Q +ELEKEF YL RR LS LGLTERQIKIWFQNRRMK
Sbjct: 5 LEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKY 64
Query: 379 KR 380
K+
Sbjct: 65 KK 66
>gi|4322040|gb|AAD15930.1| homeobox protein [Petromyzon marinus]
gi|429510506|gb|AFZ94991.1| transcription factor Hox6 [Petromyzon marinus]
Length = 248
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 164 RGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 221
>gi|332692486|gb|AEE90166.1| Homeobox B8a [Anguilla anguilla]
gi|385654477|gb|AFI61978.1| Hox-B8a [Anguilla japonica]
Length = 248
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 52/93 (55%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+ +
Sbjct: 150 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 209
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNT 417
K EA +K Q+ T+ ++
Sbjct: 210 DKFPSSKSEQEAIEKERKEKEQTGGTQTAGEDS 242
>gi|123320|sp|P10178.1|HMB3_TRIGR RecName: Full=Homeobox protein HB3
gi|1335679|emb|CAA31544.1| unnamed protein product [Tripneustes gratilla]
Length = 108
Score = 74.3 bits (181), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ Q +ELEKEF + Y+ RR +++ LGL+ERQIKIWFQNRRMK KR H
Sbjct: 29 RGRQTYTRQQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWKREH 86
>gi|290760392|gb|ADD54565.1| HOXD10 [Chalcides bedriagai]
gi|290760394|gb|ADD54566.1| HOXD10 [Chalcides ocellatus]
Length = 351
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 270 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 329
Query: 376 MKLKR 380
MKLK+
Sbjct: 330 MKLKK 334
>gi|324515196|gb|ADY46119.1| Homeobox protein pal-1 [Ascaris suum]
Length = 240
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++R VY+ +Q +ELEKEFR T ++ S+R+ LS EL LTERQIKIWFQNRR K +R
Sbjct: 176 KYRMVYTDYQRLELEKEFRTTQFINSERKSQLSSELQLTERQIKIWFQNRRAKDRR 231
>gi|290760396|gb|ADD54567.1| HOXD10 [Saiphos equalis]
Length = 348
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 267 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 326
Query: 376 MKLKR 380
MKLK+
Sbjct: 327 MKLKK 331
>gi|158702275|gb|ABW77473.1| homeobox protein HoxB10ab [Salmo salar]
Length = 287
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 261 TSSILLAHLQQVQKDLGLGASDSLSSEKDIPSNL--DLSQIPKPPPSSSHTYSNQIHKNL 318
+SSI+LA Q DL +G +D PS++ + + P+ T+ N
Sbjct: 156 SSSIILAS-QTNTGDLVIGL------RRDKPSSVLPEGDKSPRQETQEDATFENDASCGW 208
Query: 319 LQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMK 377
L GR ++ YS +Q +ELEKEF YL DRR +++ + LT+RQ+KIWFQNRRMK
Sbjct: 209 LWAKAGRKKRCPYSKYQTLELEKEFLFNVYLTRDRRLEIARSVNLTDRQVKIWFQNRRMK 268
Query: 378 LKR 380
+K+
Sbjct: 269 MKK 271
>gi|148236299|ref|NP_001080293.1| homeobox A3 [Xenopus laevis]
gi|27469867|gb|AAH41731.1| Hoxa3a-prov protein [Xenopus laevis]
Length = 406
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 160 QSSSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 219
Query: 380 R 380
+
Sbjct: 220 K 220
>gi|7159363|gb|AAF36974.2|AF230521_1 homeobox transcription factor [Anopheles gambiae]
Length = 185
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 8/113 (7%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R RQ YS HQ +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ +
Sbjct: 8 RTRQSYSRHQTIELEKEFHFNRYLNRRRRIEIASMLKLTERQIKIWFQNRRMKAKKDNSA 67
Query: 383 ----PDMVV--EYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIREH 429
PD+ E ++S E+ A Q +H ++ + + NT + + + H
Sbjct: 68 SANTPDLTYDGEIPQQSLESIVAVQSQHHTASDSQPLSMNTSASTVTQQVGRH 120
>gi|432881693|ref|XP_004073905.1| PREDICTED: homeobox protein Hox-A10-like [Oryzias latipes]
Length = 379
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 298 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRR 357
Query: 376 MKLKR 380
MKLK+
Sbjct: 358 MKLKK 362
>gi|340727736|ref|XP_003402193.1| PREDICTED: homeotic protein ultrabithorax-like [Bombus terrestris]
Length = 330
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 233 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKK 288
>gi|74267515|dbj|BAE44256.1| hoxA10a [Oryzias latipes]
gi|83016926|dbj|BAE53458.1| hoxA10a [Oryzias latipes]
Length = 362
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 281 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRR 340
Query: 376 MKLKR 380
MKLK+
Sbjct: 341 MKLKK 345
>gi|358332706|dbj|GAA30037.2| homeobox protein SMOX-1 [Clonorchis sinensis]
Length = 733
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 489 RTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQIKIWFQNRRMKWKKDH 546
>gi|290760388|gb|ADD54563.1| HOXD10 [Sphenodon punctatus]
Length = 339
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 258 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 317
Query: 376 MKLKR 380
MKLK+
Sbjct: 318 MKLKK 322
>gi|126517502|ref|NP_034598.2| homeobox protein Hox-D3 [Mus musculus]
gi|224471899|sp|P09027.4|HXD3_MOUSE RecName: Full=Homeobox protein Hox-D3; AltName: Full=Homeobox
protein Hox-4.1; AltName: Full=Homeobox protein MH-19
gi|74227447|dbj|BAE21791.1| unnamed protein product [Mus musculus]
gi|148695232|gb|EDL27179.1| homeobox D3, isoform CRA_b [Mus musculus]
gi|187950755|gb|AAI37719.1| Homeo box D3 [Mus musculus]
gi|223459826|gb|AAI37717.1| Homeo box D3 [Mus musculus]
Length = 433
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 197 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 252
>gi|345489354|ref|XP_001603621.2| PREDICTED: homeotic protein ultrabithorax-like [Nasonia
vitripennis]
Length = 345
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 250 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 305
>gi|14916604|sp|Q9PWD6.1|HXA10_MORSA RecName: Full=Homeobox protein Hox-A10
gi|5669601|gb|AAD46395.1|AF089743_1 homeodomain protein Hox-A10 [Morone saxatilis]
Length = 289
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 208 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRR 267
Query: 376 MKLKR 380
MKLK+
Sbjct: 268 MKLKK 272
>gi|359754084|gb|AEV59507.1| HOXA3 [Macropus eugenii]
Length = 438
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 194 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 253
Query: 380 R 380
+
Sbjct: 254 K 254
>gi|118093551|ref|XP_428765.2| PREDICTED: homeobox protein Hox-D3 [Gallus gallus]
Length = 413
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 180 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 235
>gi|353526231|sp|Q9PWL7.2|HXBAA_DANRE RecName: Full=Homeobox protein Hox-B10a; Short=Hox-B10
gi|190338948|gb|AAI63689.1| Homeo box B10a [Danio rerio]
Length = 279
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 286 SEKDI-PSNL--DLSQIPKPPPSSSHTYSNQIHKN-LLQCNTGRFRQV-YSSHQIVELEK 340
S+ DI P+NL D ++ K P + + + N L GR ++ YS HQI+ELEK
Sbjct: 164 SKDDIEPNNLQTDFTRGDKTPREKTQDVTLENAANGWLSAKAGRKKRCPYSKHQILELEK 223
Query: 341 EFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
EF YL +RR +S+ + LT+RQ+KIWFQNRRMKLK+
Sbjct: 224 EFLFNMYLTRERRLEISRSINLTDRQVKIWFQNRRMKLKK 263
>gi|385654527|gb|AFI62021.1| Hox-D10a [Anguilla japonica]
Length = 334
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 253 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 312
Query: 376 MKLKR 380
MKLK+
Sbjct: 313 MKLKK 317
>gi|87042406|gb|ABD16212.1| ultrabithorax [Strigamia maritima]
Length = 267
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 292 SNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSD 351
+N + P P+++HT+ + R RQ Y+ +Q +ELEKEF +YL
Sbjct: 135 TNSSTAASPVQQPATNHTFYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRR 194
Query: 352 RRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDM--VVEYVKESSEARSASQ---KTNHQ 406
RR ++ L LTERQIKIWFQNRRMKLK+ + + E K++ A++A+ TN Q
Sbjct: 195 RRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQTAKTAATLQPTTNSQ 254
Query: 407 SAPADTSAPN 416
T PN
Sbjct: 255 GTTDSTPTPN 264
>gi|332692530|gb|AEE90205.1| Homeobox D10a [Anguilla anguilla]
Length = 334
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 253 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 312
Query: 376 MKLKR 380
MKLK+
Sbjct: 313 MKLKK 317
>gi|332024155|gb|EGI64371.1| Homeobox protein Hox-A4 [Acromyrmex echinatior]
Length = 353
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ QI+ELE EFRL YL +R +L++ + LTERQ+KIWFQNRRMK K++ P+
Sbjct: 228 RTRQTYTRTQILELETEFRLHKYLAKKQRTMLAQNISLTERQVKIWFQNRRMKEKKS-PN 286
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIREHYERSAVPFP 438
+ + E+S ++ ++N Q +T N ++ + ++ YE FP
Sbjct: 287 TLN--IIETSPSKLTVSESNTQMIIHETQVLNPAQQTQLQPPQQFYEEHQNYFP 338
>gi|395519809|ref|XP_003764034.1| PREDICTED: homeobox protein Hox-D3 [Sarcophilus harrisii]
Length = 430
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 197 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 252
>gi|297262536|ref|XP_001090607.2| PREDICTED: hypothetical protein LOC702321 [Macaca mulatta]
Length = 767
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 686 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 745
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 746 MKLKKMN 752
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R YS QI ELE+EF Y+ ++R LS+ L LT+RQ+KIWFQNRRMK K+
Sbjct: 236 RCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKK 289
>gi|114581897|ref|XP_001153177.1| PREDICTED: homeobox protein Hox-D3 [Pan troglodytes]
Length = 433
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 197 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 252
>gi|969087|gb|AAA84411.1| UBXIIB [Drosophila melanogaster]
Length = 372
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 304 PSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLS 357
P+ S YS + +LL G R RQ Y+ +Q +ELEKEF +YL RR ++
Sbjct: 253 PTKSKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMA 312
Query: 358 KELGLTERQIKIWFQNRRMKLKR 380
L LTERQIKIWFQNRRMKLK+
Sbjct: 313 HALCLTERQIKIWFQNRRMKLKK 335
>gi|395519805|ref|XP_003764032.1| PREDICTED: homeobox protein Hox-D10 [Sarcophilus harrisii]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|359754120|gb|AEV59540.1| HOXD10 [Macropus eugenii]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|332209407|ref|XP_003253803.1| PREDICTED: homeobox protein Hox-D3 [Nomascus leucogenys]
Length = 442
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 206 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 261
>gi|327283063|ref|XP_003226261.1| PREDICTED: homeobox protein Hox-D10-like [Anolis carolinensis]
Length = 661
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 580 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 639
Query: 376 MKLKR 380
MKLK+
Sbjct: 640 MKLKK 644
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R Y+ +QI ELE+EF Y+ ++R LS+ L LT+RQ+KIWFQNRRMK K+ + D
Sbjct: 232 RCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNRD 289
>gi|301612435|ref|XP_002935721.1| PREDICTED: homeobox protein Hox-D10 [Xenopus (Silurana) tropicalis]
Length = 338
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 257 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 316
Query: 376 MKLKR 380
MKLK+
Sbjct: 317 MKLKK 321
>gi|126326343|ref|XP_001368497.1| PREDICTED: homeobox protein Hox-D10 [Monodelphis domestica]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|148222946|ref|NP_001083635.1| homeobox D10 [Xenopus laevis]
gi|38541382|gb|AAH61944.1| Hoxd10 protein [Xenopus laevis]
Length = 337
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 256 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 315
Query: 376 MKLKR 380
MKLK+
Sbjct: 316 MKLKK 320
>gi|354472274|ref|XP_003498365.1| PREDICTED: homeobox protein Hox-D10 [Cricetulus griseus]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|119364594|sp|O13074.2|HXB4A_FUGRU RecName: Full=Homeobox protein Hox-B4a; AltName: Full=FrHOXB-4
gi|94482798|gb|ABF22416.1| homeobox protein HoxB4a [Takifugu rubripes]
Length = 288
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
Query: 310 YSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTE 364
+ ++H N++ N TG R R Y+ Q++ELEKEF YL RR ++ L L+E
Sbjct: 142 WMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSE 201
Query: 365 RQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQ 406
RQIKIWFQNRRMK K+ H +++ RS S TN Q
Sbjct: 202 RQIKIWFQNRRMKWKKDH-------KLPNTKVRSGSTNTNSQ 236
>gi|410899434|ref|XP_003963202.1| PREDICTED: homeobox protein Hox-C10a-like [Takifugu rubripes]
Length = 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
S + N L+ +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 227 SEKTTGNWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLEISRSINLTDRQVKI 286
Query: 370 WFQNRRMKLKR 380
WFQNRRMKLK+
Sbjct: 287 WFQNRRMKLKK 297
>gi|327275820|ref|XP_003222670.1| PREDICTED: homeobox protein Hox-B8-like [Anolis carolinensis]
Length = 244
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 149 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 204
>gi|24647525|ref|NP_732173.1| ultrabithorax, isoform C [Drosophila melanogaster]
gi|23171495|gb|AAN13719.1| ultrabithorax, isoform C [Drosophila melanogaster]
Length = 372
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 304 PSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLS 357
P+ S YS + +LL G R RQ Y+ +Q +ELEKEF +YL RR ++
Sbjct: 253 PTKSKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMA 312
Query: 358 KELGLTERQIKIWFQNRRMKLKR 380
L LTERQIKIWFQNRRMKLK+
Sbjct: 313 HALCLTERQIKIWFQNRRMKLKK 335
>gi|51415|emb|CAA44541.1| Hox-4.5 [Mus musculus]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGREKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|301762936|ref|XP_002916894.1| PREDICTED: hypothetical protein LOC100482582 [Ailuropoda
melanoleuca]
Length = 805
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 394 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 449
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 321 CNTGRF-------RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQN 373
CN+ F RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQN
Sbjct: 718 CNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQN 777
Query: 374 RRMKLKR 380
RRMK K+
Sbjct: 778 RRMKWKK 784
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L + R ++ Y+ +Q +ELEKEF YL DRR +++ L L+ERQ+KIWFQNRR
Sbjct: 175 NWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRR 234
Query: 376 MKLKRTH 382
MK+K+ +
Sbjct: 235 MKMKKMN 241
>gi|149642807|ref|NP_001092575.1| homeobox protein Hox-D10 [Bos taurus]
gi|148745318|gb|AAI42146.1| HOXD10 protein [Bos taurus]
gi|296490650|tpg|DAA32763.1| TPA: homeobox D10 [Bos taurus]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|224813652|gb|ACN65055.1| homeo box B4a [Megalobrama amblycephala]
Length = 246
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 281 SDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQ-------------------IHKNLLQC 321
+ +LS+ PS+ S P PPP+ T ++Q +H N++
Sbjct: 85 TTALSTPPPEPSHHCDSVTPSPPPACGQTPTSQNTSTVTSRKDPVVYPWMKKVHVNIVSP 144
Query: 322 NTG-----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
N R R Y+ Q++ELEKEF YL RR ++ L L+ERQIKIWFQNRRM
Sbjct: 145 NYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRM 204
Query: 377 KLKRTHPDMVVEYVKESSEARSASQKTNHQSAPA 410
K K+ H +++ RS S TN P
Sbjct: 205 KWKKDH-------KLPNTKIRSNSANTNSSGGPT 231
>gi|149730935|ref|XP_001500187.1| PREDICTED: homeobox protein Hox-D10 [Equus caballus]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|126326353|ref|XP_001368627.1| PREDICTED: homeobox protein Hox-D3 [Monodelphis domestica]
Length = 431
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 198 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 253
>gi|259013346|ref|NP_001158381.1| homeobox 11/13c [Saccoglossus kowalevskii]
gi|32307783|gb|AAP79288.1| hox 11/13c [Saccoglossus kowalevskii]
Length = 253
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 39/51 (76%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS QI ELEKEF+ YL DRR LS+ L LTERQIKIWFQNRRMKLK+
Sbjct: 166 YSKLQIFELEKEFQQNMYLTRDRRSRLSQALNLTERQIKIWFQNRRMKLKK 216
>gi|969090|gb|AAA84408.1| UBXIA [Drosophila melanogaster]
Length = 380
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 252 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 311
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 312 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 343
>gi|225543570|ref|NP_571616.1| homeobox protein Hox-B10a [Danio rerio]
Length = 279
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 286 SEKDI-PSNL--DLSQIPKPPPSSSHTYSNQIHKN-LLQCNTGRFRQV-YSSHQIVELEK 340
S+ DI P+NL D ++ K P + + + N L GR ++ YS HQI+ELEK
Sbjct: 164 SKDDIEPNNLQTDFTRGDKTPREKTQDVTLENAANGWLSAKAGRKKRCPYSKHQILELEK 223
Query: 341 EFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
EF YL +RR +S+ + LT+RQ+KIWFQNRRMKLK+
Sbjct: 224 EFLFNMYLTRERRLEISRSINLTDRQVKIWFQNRRMKLKK 263
>gi|311272685|ref|XP_003133545.1| PREDICTED: homeobox protein Hox-D10 [Sus scrofa]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|119370776|sp|Q1KL16.1|HXAAA_FUGRU RecName: Full=Homeobox protein Hox-A10a
gi|94482758|gb|ABF22378.1| homeobox protein HoxA10a [Takifugu rubripes]
Length = 287
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 206 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRR 265
Query: 376 MKLKR 380
MKLK+
Sbjct: 266 MKLKK 270
>gi|31560501|ref|NP_038582.2| homeobox protein Hox-D10 [Mus musculus]
gi|114152824|sp|P28359.2|HXD10_MOUSE RecName: Full=Homeobox protein Hox-D10; AltName: Full=Homeobox
protein Hox-4.5; AltName: Full=Homeobox protein Hox-5.3
gi|15488636|gb|AAH13463.1| Homeo box D10 [Mus musculus]
gi|29144954|gb|AAH48690.1| Homeo box D10 [Mus musculus]
gi|148695225|gb|EDL27172.1| homeobox D10 [Mus musculus]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|24647523|ref|NP_732172.1| ultrabithorax, isoform E [Drosophila melanogaster]
gi|23171494|gb|AAN13718.1| ultrabithorax, isoform E [Drosophila melanogaster]
gi|33636523|gb|AAQ23559.1| RE43738p [Drosophila melanogaster]
gi|220945946|gb|ACL85516.1| Ubx-PE [synthetic construct]
gi|220955710|gb|ACL90398.1| Ubx-PE [synthetic construct]
Length = 380
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 252 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 311
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 312 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 343
>gi|21362265|ref|NP_034591.1| homeobox protein Hox-B8 [Mus musculus]
gi|300793662|ref|NP_001178578.1| homeobox protein Hox-B8 [Rattus norvegicus]
gi|123259|sp|P09632.2|HXB8_MOUSE RecName: Full=Homeobox protein Hox-B8; AltName: Full=Homeobox
protein Hox-2.4
gi|51392|emb|CAA32000.1| unnamed protein product [Mus musculus]
gi|51397|emb|CAA38014.1| homeobox-2.4 intracisternal A-particle protein [Mus musculus]
gi|295919|emb|CAA32141.1| Hox-2.4 protein [Mus musculus]
gi|148684076|gb|EDL16023.1| homeobox B8 [Mus musculus]
gi|149053980|gb|EDM05797.1| homeo box B8 (mapped) [Rattus norvegicus]
gi|223460336|gb|AAI39213.1| Hoxb8 protein [Mus musculus]
gi|223461094|gb|AAI39210.1| Homeo box B8 [Mus musculus]
Length = 243
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>gi|363735862|ref|XP_001234539.2| PREDICTED: homeobox protein Hox-D10 [Gallus gallus]
Length = 339
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 258 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 317
Query: 376 MKLKR 380
MKLK+
Sbjct: 318 MKLKK 322
>gi|344268820|ref|XP_003406254.1| PREDICTED: homeobox protein Hox-D10 [Loxodonta africana]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|194900579|ref|XP_001979833.1| GG16812 [Drosophila erecta]
gi|190651536|gb|EDV48791.1| GG16812 [Drosophila erecta]
Length = 381
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 253 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 312
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 313 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 344
>gi|17136604|ref|NP_476794.1| zerknullt-related, isoform A [Drosophila melanogaster]
gi|68845291|sp|P09090.2|ZEN2_DROME RecName: Full=Protein zerknuellt 2; Short=ZEN-2
gi|4389431|gb|AAD19801.1| DNA-binding-protein,transcription-factor [Drosophila melanogaster]
gi|7298882|gb|AAF54088.1| zerknullt-related, isoform A [Drosophila melanogaster]
Length = 252
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 43/57 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
R R +SS Q++ELE+EF L YL RR +S+ L LTERQ+KIWFQNRRMKLK++
Sbjct: 45 RSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKS 101
>gi|84105096|gb|ABC54588.1| zerknullt [Episyrphus balteatus]
Length = 330
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R +SS+Q+++LE+EF YL RR +S+ L L+ERQ+KIWFQNRRMK K+
Sbjct: 52 RARTAFSSNQLIQLEREFHTNKYLCRPRRIEISQRLELSERQVKIWFQNRRMKSKKDAAR 111
Query: 385 MVVEYVKESSEARSASQKTNHQSAPA 410
+ +Y+K + S S + N SAP
Sbjct: 112 GITDYIKFRPSSDSGSSRGN--SAPV 135
>gi|13273317|ref|NP_076921.1| homeobox protein Hox-B8 [Homo sapiens]
gi|300116176|ref|NP_001177816.1| homeobox protein Hox-B8 [Macaca mulatta]
gi|296202577|ref|XP_002748517.1| PREDICTED: homeobox protein Hox-B8 [Callithrix jacchus]
gi|335297810|ref|XP_003358122.1| PREDICTED: homeobox protein Hox-B8-like [Sus scrofa]
gi|395826622|ref|XP_003786516.1| PREDICTED: homeobox protein Hox-B8 [Otolemur garnettii]
gi|397514560|ref|XP_003827549.1| PREDICTED: homeobox protein Hox-B8 [Pan paniscus]
gi|403279483|ref|XP_003931279.1| PREDICTED: homeobox protein Hox-B8 [Saimiri boliviensis
boliviensis]
gi|426347614|ref|XP_004041444.1| PREDICTED: homeobox protein Hox-B8 [Gorilla gorilla gorilla]
gi|20141506|sp|P17481.2|HXB8_HUMAN RecName: Full=Homeobox protein Hox-B8; AltName: Full=Homeobox
protein Hox-2.4; AltName: Full=Homeobox protein Hox-2D
gi|11993911|gb|AAG42143.1| HOXB8 [Homo sapiens]
gi|119615130|gb|EAW94724.1| homeobox B8, isoform CRA_b [Homo sapiens]
gi|146327438|gb|AAI41561.1| Homeobox B8 [synthetic construct]
gi|208966500|dbj|BAG73264.1| homeobox B8 [synthetic construct]
gi|281344384|gb|EFB19968.1| hypothetical protein PANDA_005015 [Ailuropoda melanoleuca]
gi|410207798|gb|JAA01118.1| homeobox B8 [Pan troglodytes]
Length = 243
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>gi|330340382|ref|NP_001193353.1| homeobox protein Hox-D10 [Oryctolagus cuniculus]
gi|355750645|gb|EHH54972.1| hypothetical protein EGM_04088 [Macaca fascicularis]
gi|440892332|gb|ELR45565.1| Homeobox protein Hox-D10 [Bos grunniens mutus]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|290760383|gb|ADD54559.1| HOXD10 [Trachemys scripta]
Length = 339
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 258 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 317
Query: 376 MKLKR 380
MKLK+
Sbjct: 318 MKLKK 322
>gi|158702291|gb|ABW77488.1| homeobox protein HoxB5ba [Salmo salar]
Length = 279
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 24/150 (16%)
Query: 235 SSYKETENTQFNSETNDLSKLEEPNKTSSI--LLAHLQQVQKDLGLGASDSLSSEKDIPS 292
S + E E+T SET EE TSS + A QQ+Q++ S ++S++
Sbjct: 132 SHFTEIEDTSVVSET------EEGAHTSSTSSMAARAQQLQQESNNATSTTISND----- 180
Query: 293 NLDLSQIPKPPPSSSHTYSNQIHKN--LLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPS 350
Q P+ P + ++H N + + R R Y+ +Q +ELEKEF YL
Sbjct: 181 ----CQTPQIFP-----WMRKLHINHEMAGPDGKRARTAYTRYQTLELEKEFHFNRYLTR 231
Query: 351 DRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 232 RRRIEIAHTLCLTERQIKIWFQNRRMKWKK 261
>gi|328927053|ref|NP_001129095.2| homeobox protein Hox-D10 [Pan troglodytes]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|359754117|gb|AEV59537.1| HOXD3 [Macropus eugenii]
Length = 429
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|296487923|tpg|DAA30036.1| TPA: homeobox C11 [Bos taurus]
Length = 624
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 11/118 (9%)
Query: 271 QVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHK-----NLLQCNTGR 325
+ +++L L SEKD D S P +S + +I N L +GR
Sbjct: 497 KTEQNLAGPKGSPLESEKDRAKTADSS-----PDTSDNEAKEEIKAENTTGNWLTAKSGR 551
Query: 326 FRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRRMKLK+ +
Sbjct: 552 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMN 609
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
R YS QI ELE+EF Y+ ++R LS+ L LT+RQ+KIWFQNRRMK K+ D +
Sbjct: 238 RCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRL 297
>gi|119615129|gb|EAW94723.1| homeobox B8, isoform CRA_a [Homo sapiens]
gi|431890745|gb|ELK01624.1| Homeobox protein Hox-B8 [Pteropus alecto]
Length = 242
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 202
>gi|426220829|ref|XP_004004614.1| PREDICTED: homeobox protein Hox-D10 [Ovis aries]
Length = 336
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 255 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 314
Query: 376 MKLKR 380
MKLK+
Sbjct: 315 MKLKK 319
>gi|335371121|gb|AEH57089.1| Hox4 [Bugula neritina]
Length = 233
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 146 RARTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLDLSERQIKIWFQNRRMKWKKEH 203
>gi|296204458|ref|XP_002749349.1| PREDICTED: homeobox protein Hox-D10 [Callithrix jacchus]
gi|403258705|ref|XP_003921890.1| PREDICTED: homeobox protein Hox-D10 [Saimiri boliviensis
boliviensis]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|157819367|ref|NP_001100564.1| homeo box D10 [Rattus norvegicus]
gi|149022287|gb|EDL79181.1| homeo box D10 (predicted) [Rattus norvegicus]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|57091665|ref|XP_548179.1| PREDICTED: homeobox protein Hox-B8 [Canis lupus familiaris]
Length = 243
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>gi|348585703|ref|XP_003478610.1| PREDICTED: homeobox protein Hox-D10-like [Cavia porcellus]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|146324930|sp|A2D5V0.1|HXD10_LAGLA RecName: Full=Homeobox protein Hox-D10
gi|122935055|gb|ABM68292.1| HOXD10 [Lagothrix lagotricha]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|2911356|gb|AAC04332.1| homeobox protein HoxQ8 [Petromyzon marinus]
Length = 272
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+ +
Sbjct: 176 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 235
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAP 415
KE+ E S Q+ Q P + + P
Sbjct: 236 DSFPAPKEAGEEGSTKQQ---QQQPEEATEP 263
>gi|297264383|ref|XP_001095080.2| PREDICTED: hypothetical protein LOC701064 [Macaca mulatta]
Length = 3029
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 1232 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 1286
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 1287 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 1331
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 2127 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 2182
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 38/56 (67%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+
Sbjct: 540 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 595
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 326 FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R +S+ Q+ ELEKEF YL RR ++ L L + Q+KIWFQNRRMK K+
Sbjct: 2933 IRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKK 2987
>gi|255742473|gb|ACU32585.1| homeobox protein HoxD10 [Callorhinchus milii]
Length = 338
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L TGR ++ Y+ +Q +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 257 NWLTAKTGRKKRCPYTKYQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 316
Query: 376 MKLKR 380
MKLK+
Sbjct: 317 MKLKK 321
>gi|969086|gb|AAA84412.1| UBXIB [Drosophila melanogaster]
Length = 389
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 261 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 320
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 321 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
>gi|47228656|emb|CAG07388.1| unnamed protein product [Tetraodon nigroviridis]
Length = 543
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L+ +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 462 NWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLEISRSINLTDRQVKIWFQNRR 521
Query: 376 MKLKR 380
MKLK+
Sbjct: 522 MKLKK 526
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
YS QI ELE+EF Y+ ++R LS+ L LT+RQI +
Sbjct: 254 YSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQIWV 293
>gi|195500193|ref|XP_002097268.1| GE26131 [Drosophila yakuba]
gi|194183369|gb|EDW96980.1| GE26131 [Drosophila yakuba]
Length = 381
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 253 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 312
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 313 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 344
>gi|21755659|dbj|BAC04730.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>gi|23510366|ref|NP_002139.2| homeobox protein Hox-D10 [Homo sapiens]
gi|74004886|ref|XP_545537.2| PREDICTED: homeobox protein Hox-D10 [Canis lupus familiaris]
gi|332209400|ref|XP_003253800.1| PREDICTED: homeobox protein Hox-D10 [Nomascus leucogenys]
gi|410968900|ref|XP_003990937.1| PREDICTED: homeobox protein Hox-D10 [Felis catus]
gi|426337797|ref|XP_004032883.1| PREDICTED: homeobox protein Hox-D10 [Gorilla gorilla gorilla]
gi|143811403|sp|P28358.2|HXD10_HUMAN RecName: Full=Homeobox protein Hox-D10; AltName: Full=Homeobox
protein Hox-4D; AltName: Full=Homeobox protein Hox-4E
gi|46854699|gb|AAH69619.1| Homeo box D10 [Homo sapiens]
gi|50959595|gb|AAH74760.1| Homeobox D10 [Homo sapiens]
gi|119631496|gb|EAX11091.1| homeobox D10 [Homo sapiens]
gi|167773155|gb|ABZ92012.1| homeobox D10 [synthetic construct]
gi|208968517|dbj|BAG74097.1| homeobox D10 [synthetic construct]
Length = 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|449506747|ref|XP_004176781.1| PREDICTED: homeobox protein Hox-D10 [Taeniopygia guttata]
Length = 226
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 145 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 204
Query: 376 MKLKR 380
MKLK+
Sbjct: 205 MKLKK 209
>gi|432107311|gb|ELK32725.1| Homeobox protein Hox-D10 [Myotis davidii]
Length = 307
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 226 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 285
Query: 376 MKLKR 380
MKLK+
Sbjct: 286 MKLKK 290
>gi|350405522|ref|XP_003487461.1| PREDICTED: homeotic protein ultrabithorax-like [Bombus impatiens]
Length = 317
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 233 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKK 288
>gi|327280446|ref|XP_003224963.1| PREDICTED: homeobox protein Hox-A3-like [Anolis carolinensis]
Length = 429
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QPSSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 RTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFI 426
+ D + + SS +S S+ +P SAP ++ S +
Sbjct: 248 K---DQKGKGMMTSSGGQSPSR------SPVP-SAPGGYLNSMHSLV 284
>gi|146324932|sp|A1YFT7.1|HXD10_SAGLB RecName: Full=Homeobox protein Hox-D10
gi|121223444|gb|ABM47749.1| HOXD10 [Saguinus labiatus]
Length = 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|4760768|dbj|BAA77403.1| PLOX3-Dj [Dugesia japonica]
Length = 363
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 25/141 (17%)
Query: 246 NSETNDLSKLEEPNKTSSILLAHLQQVQKDLGLGASDSLSSEKDI----PSNLDLSQIPK 301
NS N +SK EE KT S L + + + + SS + I P N+D
Sbjct: 177 NSSGNPISKREESRKTDSKLDSEMNTETSNQARSTTSCSSSPESINDPIPGNID------ 230
Query: 302 PPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELG 361
L+ ++ R R Y+ QI+ELEKEF YL RR +++ L
Sbjct: 231 ---------------QLILSDSKRNRTAYTRQQILELEKEFHFNKYLTRKRRIEIAQSLQ 275
Query: 362 LTERQIKIWFQNRRMKLKRTH 382
L+ERQ+KIWFQNRRMK K+ H
Sbjct: 276 LSERQVKIWFQNRRMKWKKDH 296
>gi|322799475|gb|EFZ20783.1| hypothetical protein SINV_00833 [Solenopsis invicta]
Length = 522
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 308 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDH 365
>gi|301617263|ref|XP_002938067.1| PREDICTED: homeobox protein Hox-B8-like [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 202
>gi|158702216|gb|ABW77439.1| homeobox protein HoxA10aa [Salmo salar]
Length = 294
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ YS HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 213 NWLTAKSGRKKRCPYSKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 272
Query: 376 MKLKR 380
MKLK+
Sbjct: 273 MKLKK 277
>gi|221378068|ref|NP_001138017.1| zerknullt-related, isoform B [Drosophila melanogaster]
gi|115646515|gb|ABI34191.2| RT01003p [Drosophila melanogaster]
gi|115646612|gb|ABI34221.2| RT01103p [Drosophila melanogaster]
gi|220903016|gb|ACL83476.1| zerknullt-related, isoform B [Drosophila melanogaster]
Length = 232
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 43/57 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
R R +SS Q++ELE+EF L YL RR +S+ L LTERQ+KIWFQNRRMKLK++
Sbjct: 25 RSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKS 81
>gi|807874|emb|CAA48417.1| z2 [Drosophila sp.]
Length = 252
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 43/57 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
R R +SS Q++ELE+EF L YL RR +S+ L LTERQ+KIWFQNRRMKLK++
Sbjct: 45 RSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKS 101
>gi|397327509|gb|AFO42771.1| HOXD10 [Polyodon spathula]
Length = 334
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
+N+ N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 247 TNKPTSNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISQSVNLTDRQVKI 306
Query: 370 WFQNRRMKLKR 380
WFQNRRMKLK+
Sbjct: 307 WFQNRRMKLKK 317
>gi|837347|gb|AAB33590.1| Hoxb-4 homeodomain protein [Takifugu rubripes=Japanese puffer fish,
Peptide, 251 aa]
gi|2130556|gb|AAC60205.1| homeobox protein HOXB-4 [Takifugu rubripes]
Length = 251
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 12/104 (11%)
Query: 308 HTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGL 362
+ + ++H N++ N TG R R Y+ Q++ELEKEF YL RR ++ L L
Sbjct: 143 YPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCL 202
Query: 363 TERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQ 406
+ERQIKIWFQNRRMK K+ H +++ RS S TN Q
Sbjct: 203 SERQIKIWFQNRRMKWKKDH-------KLPNTKVRSGSTNTNSQ 239
>gi|357626566|gb|EHJ76617.1| putative fushi-tarazu-like protein [Danaus plexippus]
Length = 433
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ Q +ELEKEF YL RR +S LGLTERQIKIWFQNRRMK K+
Sbjct: 304 RTRQTYTRFQTLELEKEFHFNKYLSRRRRIEVSHALGLTERQIKIWFQNRRMKAKK 359
>gi|220898215|gb|ACL81468.1| HoxD3 [Latimeria menadoensis]
Length = 396
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 163 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 218
>gi|17985969|ref|NP_536752.1| ultrabithorax, isoform A [Drosophila melanogaster]
gi|48428932|sp|P83949.1|UBX_DROME RecName: Full=Homeotic protein ultrabithorax
gi|48428933|sp|P83950.1|UBX_DROSI RecName: Full=Homeotic protein ultrabithorax
gi|433477|emb|CAA53803.1| homeotic ultrabithorax protein [Drosophila melanogaster]
gi|829190|emb|CAA29194.1| Ultrabithorax gene product [Drosophila melanogaster]
gi|4323521|gb|AAD16402.1| Ultrabithorax [Drosophila simulans]
gi|10726569|gb|AAF55355.2| ultrabithorax, isoform A [Drosophila melanogaster]
Length = 389
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 261 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 320
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 321 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 352
>gi|410905345|ref|XP_003966152.1| PREDICTED: homeobox protein Hox-A10b-like [Takifugu rubripes]
gi|119370777|sp|Q1KKZ4.1|HXAAB_FUGRU RecName: Full=Homeobox protein Hox-A10b
gi|94482781|gb|ABF22400.1| homeobox protein HoxA10b [Takifugu rubripes]
Length = 331
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N+ N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIW
Sbjct: 245 NETAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIW 304
Query: 371 FQNRRMKLKR 380
FQNRRMKLK+
Sbjct: 305 FQNRRMKLKK 314
>gi|431894932|gb|ELK04725.1| Homeobox protein Hox-D10 [Pteropus alecto]
Length = 307
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 226 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 285
Query: 376 MKLKR 380
MKLK+
Sbjct: 286 MKLKK 290
>gi|400180331|gb|AFP73299.1| Hoxa6alpha [Polyodon spathula]
Length = 226
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Query: 310 YSNQIHKNLLQCNTG----------RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKE 359
Y ++ ++ CN R RQ Y+ HQ +ELEKEF YL RR ++
Sbjct: 127 YPGSVYPWMMNCNGKYCSIYGSHGKRGRQTYTRHQTLELEKEFHFNRYLTRRRRIEIASA 186
Query: 360 LGLTERQIKIWFQNRRMKLKR 380
L LTERQIKIWFQNRRMK K+
Sbjct: 187 LCLTERQIKIWFQNRRMKWKK 207
>gi|217035826|gb|ACJ74383.1| Hox4 [Branchiostoma lanceolatum]
Length = 278
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+T R R Y+ Q++ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 173 DTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 231
>gi|225543572|ref|NP_571200.1| homeobox protein Hox-D3a [Danio rerio]
gi|223590219|sp|O42370.2|HXD3A_DANRE RecName: Full=Homeobox protein Hox-D3a; Short=Hox-D3
Length = 396
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 163 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 218
>gi|32393|emb|CAA42017.1| homeobox protein [Homo sapiens]
Length = 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|390464421|ref|XP_002806951.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100411183 [Callithrix jacchus]
Length = 954
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 115 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 169
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 170 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 214
>gi|301787259|ref|XP_002929042.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D10-like
[Ailuropoda melanoleuca]
Length = 341
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 260 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 319
Query: 376 MKLKR 380
MKLK+
Sbjct: 320 MKLKK 324
>gi|158702265|gb|ABW77464.1| homeobox protein HoxB8aa [Salmo salar]
Length = 245
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 202
>gi|363730030|ref|XP_003640751.1| PREDICTED: homeobox protein Hox-A9-like [Gallus gallus]
gi|363730038|ref|XP_003640754.1| PREDICTED: homeobox protein Hox-A9-like [Gallus gallus]
gi|363730219|ref|XP_003640782.1| PREDICTED: homeobox protein Hox-A9 [Gallus gallus]
Length = 260
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 308 HTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
H N N L + R ++ Y+ HQ +ELEKEF YL DRR +++ L LTERQ
Sbjct: 178 HIDPNNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQ 237
Query: 367 IKIWFQNRRMKLKRTHPD 384
+KIWFQNRRMK+K+ + D
Sbjct: 238 VKIWFQNRRMKMKKINKD 255
>gi|31323433|gb|AAP47018.1| HOX6/7 [Diplosoma listerianum]
Length = 126
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS +Q +ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK KR + D
Sbjct: 14 RSRQTYSRYQTLELEKEFHYNRYLTRRRRIEIANALCLSERQIKIWFQNRRMKWKRENKD 73
Query: 385 M-----VVEYVKESSEARSASQKTNHQSAPADTS 413
+++ E + R S + +S TS
Sbjct: 74 SSSNSPCIDFAAEEEKTRCDSACSESESVHLSTS 107
>gi|58382033|ref|XP_311624.2| AGAP004661-PB [Anopheles gambiae str. PEST]
gi|3420832|gb|AAC31943.1| Ultrabithorax homeotic protein IVa [Anopheles gambiae]
gi|55242654|gb|EAA07259.2| AGAP004661-PB [Anopheles gambiae str. PEST]
Length = 310
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 221 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 276
>gi|68144518|gb|AAY86180.1| homeobox protein Hox11/13 [Heliocidaris tuberculata]
Length = 336
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS QI ELEKEF+ YL DRR LS+ L LTERQ+KIWFQNRRMK+K+
Sbjct: 201 YSKLQIYELEKEFQANMYLTRDRRSKLSQALDLTERQVKIWFQNRRMKMKK 251
>gi|4760766|dbj|BAA77402.1| PLOX2-Dj [Dugesia japonica]
Length = 170
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 40/52 (76%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
R R Y+++Q+VELEKEF NYL RR LSK+L LTERQ+KIWFQNRRM
Sbjct: 53 RCRSAYTNNQLVELEKEFHYNNYLARGRRTELSKQLLLTERQVKIWFQNRRM 104
>gi|213513003|ref|NP_001133026.1| homeobox protein HoxD3aa [Salmo salar]
gi|157816017|gb|ABV82027.1| homeobox protein HoxD3aa [Salmo salar]
gi|158702369|gb|ABW77556.1| homeobox protein HoxD3aa [Salmo salar]
Length = 397
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 167 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 222
>gi|262263018|gb|ACY39978.1| HoxD3 [Heterodontus francisci]
Length = 394
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 161 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 216
>gi|213512948|ref|NP_001133051.1| homeobox protein HoxB8ab [Salmo salar]
gi|157816103|gb|ABV82070.1| homeobox protein HoxB8ab [Salmo salar]
gi|158702277|gb|ABW77475.1| homeobox protien HoxB8ab [Salmo salar]
Length = 246
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>gi|24119281|ref|NP_571608.1| homeobox protein Hox-A9b [Danio rerio]
gi|4322066|gb|AAD15942.1| homeobox protein [Danio rerio]
Length = 258
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
SN +H +T + R Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 184 SNWLHAK----STRKKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLTERQVKIW 239
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 240 FQNRRMKMKKCNKD 253
>gi|397911060|gb|AFO68806.1| homeodomain-containing protein Hox3, partial [Branchiostoma
lanceolatum]
Length = 291
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 18 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKK 73
>gi|440910521|gb|ELR60315.1| Homeobox protein Hox-B8, partial [Bos grunniens mutus]
Length = 217
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 139 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 194
>gi|195451417|ref|XP_002072909.1| GK13855 [Drosophila willistoni]
gi|194168994|gb|EDW83895.1| GK13855 [Drosophila willistoni]
Length = 384
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 255 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 314
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 315 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 346
>gi|45382501|ref|NP_990242.1| homeobox B8 [Gallus gallus]
gi|4099016|gb|AAD09228.1| Hoxb-8 [Gallus gallus]
Length = 241
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 146 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 201
>gi|301128903|emb|CBL59365.1| HoxD3 [Scyliorhinus canicula]
Length = 394
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 161 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 216
>gi|213511470|ref|NP_001135142.1| homeobox protein HoxD3ab [Salmo salar]
gi|157816031|gb|ABV82034.1| homeobox protein HoxD3ab [Salmo salar]
Length = 399
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 169 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 224
>gi|301128883|emb|CBL59346.1| HoxB9 [Scyliorhinus canicula]
Length = 252
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L + R ++ YS +Q +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 173 NNPSANWLHARSTRKKRCPYSKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIW 232
Query: 371 FQNRRMKLKRTHPDMVVEY 389
FQNRRMK+KR + V E+
Sbjct: 233 FQNRRMKMKRLSKEHVKEF 251
>gi|146324931|sp|A2T7D1.1|HXD10_PANTR RecName: Full=Homeobox protein Hox-D10
gi|124111358|gb|ABM92086.1| HOXD10 [Pan troglodytes]
Length = 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|123204478|gb|ABM73564.1| homeodomain protein [Megalobrama amblycephala]
Length = 212
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+ +
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKVN 204
>gi|432933123|ref|XP_004081816.1| PREDICTED: homeobox protein Hox-D3-like [Oryzias latipes]
Length = 399
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 166 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 221
>gi|45553381|ref|NP_996219.1| ultrabithorax, isoform F [Drosophila melanogaster]
gi|45446510|gb|AAS65158.1| ultrabithorax, isoform F [Drosophila melanogaster]
Length = 355
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 263 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 318
>gi|332024158|gb|EGI64374.1| Homeotic protein deformed [Acromyrmex echinatior]
Length = 522
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 307 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDH 364
>gi|239950180|gb|ACS36775.1| abd-A [Artemia franciscana]
Length = 258
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 123 CPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 182
>gi|126326351|ref|XP_001368596.1| PREDICTED: homeobox protein Hox-D4-like [Monodelphis domestica]
Length = 238
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 280 ASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQ 334
A L++ K P+ L Q P+ + + ++H N + N TG R R Y+ Q
Sbjct: 104 ACSQLANLKQPPNGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQ 158
Query: 335 IVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 159 VLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 206
>gi|351704298|gb|EHB07217.1| Homeobox protein Hox-A9 [Heterocephalus glaber]
Length = 255
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L + R ++ Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 177 NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 236
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 237 FQNRRMKMKKINKD 250
>gi|444723479|gb|ELW64134.1| Homeobox protein Hox-D3 [Tupaia chinensis]
Length = 282
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|3420830|gb|AAC31942.1| Ultrabithorax homeotic protein IIa [Anopheles gambiae]
Length = 327
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 238 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 293
>gi|18079282|ref|NP_536748.1| ultrabithorax, isoform B [Drosophila melanogaster]
gi|7300190|gb|AAF55356.1| ultrabithorax, isoform B [Drosophila melanogaster]
Length = 346
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 254 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 309
>gi|449277035|gb|EMC85342.1| Homeobox protein Hox-B8 [Columba livia]
Length = 241
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 146 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 201
>gi|2689617|gb|AAB91388.1| abdominal-A, partial [Ethmostigmus rubripes]
Length = 88
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 1 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 60
Query: 381 THPDMVVEYVKESSEA--RSASQKTNHQ 406
+ VKE +E R A++K HQ
Sbjct: 61 E-----MRAVKEINEQARREAAEKEKHQ 83
>gi|148695231|gb|EDL27178.1| homeobox D3, isoform CRA_a [Mus musculus]
Length = 273
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 37 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 92
>gi|449491432|ref|XP_002187352.2| PREDICTED: homeobox protein Hox-B8 [Taeniopygia guttata]
Length = 241
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 146 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 201
>gi|301128884|emb|CBL59347.1| HoxB8 [Scyliorhinus canicula]
Length = 234
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 149 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 204
>gi|255742448|gb|ACU32562.1| homeobox protein HoxB8 [Callorhinchus milii]
gi|387915250|gb|AFK11234.1| homeobox protein HoxB8 [Callorhinchus milii]
Length = 236
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 149 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 204
>gi|217035822|gb|ACJ74380.1| Hox3 [Branchiostoma lanceolatum]
Length = 409
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 136 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKK 191
>gi|444713457|gb|ELW54356.1| Homeobox protein Hox-A9 [Tupaia chinensis]
Length = 215
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L + R ++ Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRR
Sbjct: 142 NWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRR 201
Query: 376 MKLKRTHPD 384
MK+K+ + D
Sbjct: 202 MKMKKINKD 210
>gi|68144516|gb|AAY86179.1| homeobox protein Hox11/13 [Heliocidaris erythrogramma]
Length = 336
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS QI ELEKEF+ YL DRR LS+ L LTERQ+KIWFQNRRMK+K+
Sbjct: 201 YSKLQIYELEKEFQANMYLTRDRRSKLSQALDLTERQVKIWFQNRRMKMKK 251
>gi|969088|gb|AAA84410.1| UBXIVA [Drosophila melanogaster]
Length = 346
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 254 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 309
>gi|400180341|gb|AFP73308.1| Hoxa3beta [Polyodon spathula]
Length = 413
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 171 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLSLTERQIKIWFQNRRMKYKK 226
>gi|400180325|gb|AFP73293.1| Hoxa7alpha [Polyodon spathula]
Length = 210
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF + YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 133 RGRQNYTRYQTLELEKEFHFSRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKWKKEHMD 192
>gi|321475838|gb|EFX86800.1| putative homeotic abdominal-A protein [Daphnia pulex]
Length = 383
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 220 CPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 279
>gi|255742478|gb|ACU32590.1| homeobox protein HoxD3 [Callorhinchus milii]
Length = 394
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 161 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 216
>gi|148225480|ref|NP_001091156.1| homeobox protein Hox-D3 [Xenopus laevis]
gi|223635192|sp|A1L2P5.1|HXD3_XENLA RecName: Full=Homeobox protein Hox-D3
gi|120537996|gb|AAI29641.1| LOC100036911 protein [Xenopus laevis]
Length = 413
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 180 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 235
>gi|395532651|ref|XP_003768383.1| PREDICTED: homeobox protein Hox-B8 [Sarcophilus harrisii]
gi|359754101|gb|AEV59523.1| HOXB8 [Macropus eugenii]
Length = 243
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>gi|327280468|ref|XP_003224974.1| PREDICTED: homeobox protein Hox-A7-like [Anolis carolinensis]
Length = 254
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 150 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 207
>gi|62826028|gb|AAH94172.1| Unknown (protein for MGC:115122) [Xenopus laevis]
Length = 234
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|197101137|ref|NP_001127185.1| homeobox protein Hox-D10 [Pongo abelii]
gi|55725799|emb|CAH89680.1| hypothetical protein [Pongo abelii]
Length = 340
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEVSKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|229577325|ref|NP_571256.1| homeobox protein Hox-B8b [Danio rerio]
gi|60392414|sp|Q8JH55.1|HXB8B_DANRE RecName: Full=Homeobox protein Hox-B8b; AltName: Full=Homeobox
protein Hox-A8
gi|22316134|emb|CAD44456.1| homeo box protein B8b [Danio rerio]
gi|190337844|gb|AAI62153.1| Homeo box B8b [Danio rerio]
gi|190338644|gb|AAI62167.1| Homeo box B8b [Danio rerio]
Length = 247
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ YS +Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+ H
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKEH 204
>gi|340727727|ref|XP_003402189.1| PREDICTED: homeobox protein abdominal-A homolog isoform 1 [Bombus
terrestris]
Length = 395
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 267 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 326
>gi|291394579|ref|XP_002713775.1| PREDICTED: homeobox A10 isoform a (predicted)-like [Oryctolagus
cuniculus]
Length = 421
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 340 NWLTAKSGRNKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 399
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 400 MKLKKMN 406
>gi|339241427|ref|XP_003376639.1| homeotic protein deformed [Trichinella spiralis]
gi|316974632|gb|EFV58116.1| homeotic protein deformed [Trichinella spiralis]
Length = 321
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y++ Q+VELEKEF + YL RR+ L++ L L+ERQIKIWFQNRRMK+K+
Sbjct: 31 RTRTAYTNRQLVELEKEFHFSRYLSKPRRQELAESLSLSERQIKIWFQNRRMKMKK 86
>gi|254029380|gb|ACT53742.1| ultrabithorax isoform II [Parhyale hawaiensis]
Length = 293
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 171 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 227
Query: 385 MVVEYVKESSEARSASQ 401
++ +KE +E +Q
Sbjct: 228 --IQAIKELNEQEKVAQ 242
>gi|58382031|ref|XP_311623.2| AGAP004661-PA [Anopheles gambiae str. PEST]
gi|55242655|gb|EAA45000.2| AGAP004661-PA [Anopheles gambiae str. PEST]
Length = 327
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 238 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 293
>gi|392347318|ref|XP_003749798.1| PREDICTED: homeobox protein Hox-A10-like [Rattus norvegicus]
Length = 417
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 336 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 395
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 396 MKLKKMN 402
>gi|194742544|ref|XP_001953761.1| GF17924 [Drosophila ananassae]
gi|190626798|gb|EDV42322.1| GF17924 [Drosophila ananassae]
Length = 391
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 262 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 321
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 322 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 353
>gi|402899507|ref|XP_003912736.1| PREDICTED: homeobox protein Hox-B8 [Papio anubis]
Length = 293
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 202
>gi|340727729|ref|XP_003402190.1| PREDICTED: homeobox protein abdominal-A homolog isoform 2 [Bombus
terrestris]
Length = 399
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 271 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 330
>gi|332692534|gb|AEE90209.1| Homeobox D3a [Anguilla anguilla]
gi|385654531|gb|AFI62025.1| Hox-D3a [Anguilla japonica]
Length = 396
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 163 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 218
>gi|332692462|gb|AEE90145.1| Homeobox A3a, partial [Anguilla anguilla]
gi|385654462|gb|AFI61965.1| Hox-A3a, partial [Anguilla japonica]
Length = 258
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 17 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 72
>gi|301612427|ref|XP_002935734.1| PREDICTED: homeobox protein Hox-D3 [Xenopus (Silurana) tropicalis]
Length = 415
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 182 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 237
>gi|213513926|ref|NP_001133004.1| homeobox protein HoxC10ab [Salmo salar]
gi|157815954|gb|ABV81996.1| homeobox protein HoxC10ab [Salmo salar]
gi|158702333|gb|ABW77523.1| homeobox protein HoxC10ab [Salmo salar]
Length = 341
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L+ +GR ++ Y+ +Q +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLKAKSGRKKRCPYTKYQTLELEKEFLFNMYLSRERRLEISKSIDLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>gi|22477523|gb|AAH36986.1| Hoxa7 protein [Mus musculus]
gi|148666244|gb|EDK98660.1| homeobox A7, isoform CRA_a [Mus musculus]
Length = 108
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 10 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 69
>gi|3581955|emb|CAA64692.1| homeodomain protein [Girardia tigrina]
Length = 404
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS HQ +ELEKEF+ +YL RR ++ L L+ERQIKIWFQNRRMKLK+
Sbjct: 264 RGRQTYSRHQTLELEKEFQFNHYLTRRRRIEIAHNLCLSERQIKIWFQNRRMKLKK 319
>gi|123917996|sp|Q3V5Z9.1|HXD3_ORYLA RecName: Full=Homeobox protein Hox-D3
gi|74267577|dbj|BAE44287.1| hoxD3a [Oryzias latipes]
gi|83016980|dbj|BAE53501.1| hoxD3a [Oryzias latipes]
Length = 395
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 162 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 217
>gi|400180328|gb|AFP73296.1| Hoxa3alpha [Polyodon spathula]
Length = 413
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 171 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 226
>gi|397911058|gb|AFO68805.1| homeodomain-containing protein Hox3, partial [Branchiostoma
lanceolatum]
Length = 396
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 129 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKK 184
>gi|119370794|sp|Q1KKV1.1|HXCAA_FUGRU RecName: Full=Homeobox protein Hox-C10a
gi|94482827|gb|ABF22443.1| homeobox protein HoxC10a [Takifugu rubripes]
Length = 346
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
S + N L+ +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 259 SEKTTGNWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLEISRSINLTDRQVKI 318
Query: 370 WFQNRRMKLKR 380
WFQNRRMKLK+
Sbjct: 319 WFQNRRMKLKK 329
>gi|17922001|gb|AAK06846.2| abdominal-A protein [Myrmica rubra]
Length = 394
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 266 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 325
>gi|403287995|ref|XP_003935203.1| PREDICTED: homeobox protein Hox-A10 [Saimiri boliviensis
boliviensis]
Length = 410
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 329 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 388
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 389 MKLKKMN 395
>gi|383098609|ref|NP_001244283.1| homeobox protein Hox-A10 [Sus scrofa]
gi|377657200|gb|AFB74128.1| Hoxa10 [Sus scrofa]
gi|377657202|gb|AFB74129.1| Hoxa10 [Sus scrofa]
Length = 411
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 330 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 389
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 390 MKLKKMN 396
>gi|213512828|ref|NP_001133025.1| homeobox protein HoxD10aa [Salmo salar]
gi|158702366|gb|ABW77553.1| homeobox protein HoxD10aa [Salmo salar]
Length = 336
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 255 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKGVNLTDRQVKIWFQNRR 314
Query: 376 MKLKR 380
MKLK+
Sbjct: 315 MKLKK 319
>gi|348519657|ref|XP_003447346.1| PREDICTED: homeobox protein Hox-D3 [Oreochromis niloticus]
Length = 399
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 166 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 221
>gi|338724125|ref|XP_003364876.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A10-like
[Equus caballus]
Length = 413
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 332 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 392 MKLKKMN 398
>gi|217418312|gb|ACK44314.1| homeobox A10 isoform a (predicted), 3 prime [Oryctolagus cuniculus]
Length = 269
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 188 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 247
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 248 MKLKKMN 254
>gi|158702379|gb|ABW77565.1| homeobox protein HoxD3ab [Salmo salar]
Length = 399
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 169 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 224
>gi|87042409|gb|ABD16213.1| abdominal-A [Strigamia maritima]
Length = 289
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 141 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 200
>gi|3581946|emb|CAA64696.1| homeodomain protein [Girardia tigrina]
Length = 259
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ HQ +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 175 RTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHTLILTERQIKIWFQNRRMKWKKEH 232
>gi|60172784|gb|AAX14497.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 578 RTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQIKIWFQNRRMKWKKDH 635
>gi|397489133|ref|XP_003815589.1| PREDICTED: homeobox protein Hox-D10 [Pan paniscus]
Length = 410
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 329 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 388
Query: 376 MKLKR 380
MKLK+
Sbjct: 389 MKLKK 393
>gi|392347332|ref|XP_003749805.1| PREDICTED: homeobox protein Hox-A10-like [Rattus norvegicus]
gi|392356119|ref|XP_003752230.1| PREDICTED: homeobox protein Hox-A10-like [Rattus norvegicus]
Length = 413
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 332 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 392 MKLKKMN 398
>gi|358336509|dbj|GAA54999.1| homeobox protein abdominal-A [Clonorchis sinensis]
Length = 341
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF+ ++YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 117 RGRQTYSRYQTLELEKEFQYSHYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKLKK 172
>gi|328480244|gb|AEB15973.1| ultrabithorax isoform IV [Oncopeltus fasciatus]
Length = 295
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 207 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 262
>gi|321475840|gb|EFX86802.1| putative homeotic Ultrabithorax protein [Daphnia pulex]
Length = 380
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 288 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 344
Query: 385 MVVEYVKESSEARSAS 400
++ +KE +E A+
Sbjct: 345 --IQAIKELNEQDKAT 358
>gi|254029378|gb|ACT53741.1| ultrabithorax isoform I [Parhyale hawaiensis]
Length = 301
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 179 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 235
Query: 385 MVVEYVKESSEARSASQ 401
++ +KE +E +Q
Sbjct: 236 --IQAIKELNEQEKVAQ 250
>gi|220898179|gb|ACL81435.1| HoxA3 [Latimeria menadoensis]
Length = 411
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 171 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 226
>gi|242011842|ref|XP_002426653.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212510817|gb|EEB13915.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 398
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR L+ +L LTERQIKIWFQNRRMK K+
Sbjct: 194 RARTAYTSSQLVELEKEFHYNRYLCRPRRIELANQLNLTERQIKIWFQNRRMKYKK 249
>gi|157816011|gb|ABV82024.1| homeobox protein HoxD10aa [Salmo salar]
Length = 336
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 255 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKGVNLTDRQVKIWFQNRR 314
Query: 376 MKLKR 380
MKLK+
Sbjct: 315 MKLKK 319
>gi|567213|gb|AAA67125.1| homeobox protein [Mus musculus]
Length = 399
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 318 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 377
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 378 MKLKKMN 384
>gi|395738637|ref|XP_002818167.2| PREDICTED: homeobox protein Hox-A10 [Pongo abelii]
Length = 369
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 288 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 347
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 348 MKLKKMN 354
>gi|121308924|dbj|BAF43727.1| transcription factor Hox9/10 [Metacrinus rotundus]
Length = 313
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ Q +ELEKEF YL DRR +++ L LTERQ+KIWFQNRR
Sbjct: 241 NWLSATSGRKKRCPYTKFQTLELEKEFLFNMYLTRDRRVEIARLLNLTERQVKIWFQNRR 300
Query: 376 MKLKR 380
MK+K+
Sbjct: 301 MKMKK 305
>gi|340727731|ref|XP_003402191.1| PREDICTED: homeobox protein abdominal-A homolog isoform 3 [Bombus
terrestris]
Length = 399
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 271 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 330
>gi|385654457|gb|AFI61961.1| Hox-A7a, partial [Anguilla japonica]
Length = 102
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 1 RGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDH 58
>gi|24647521|ref|NP_732171.1| ultrabithorax, isoform D [Drosophila melanogaster]
gi|23171493|gb|AAN13717.1| ultrabithorax, isoform D [Drosophila melanogaster]
gi|300684546|gb|ADK27789.1| LD09363p [Drosophila melanogaster]
Length = 363
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 271 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 326
>gi|405967561|gb|EKC32709.1| Homeobox protein HOX3 [Crassostrea gigas]
Length = 402
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 144 TKRARTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLSLTERQIKIWFQNRRMKFKK 201
>gi|402888730|ref|XP_003907704.1| PREDICTED: homeobox protein Hox-D10 [Papio anubis]
Length = 388
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 300 PKPPPSSSHTYSNQIHK-----NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRR 353
P PP + + +I N L +GR ++ Y+ HQ +ELEKEF YL +RR
Sbjct: 285 PHCPPCKASLSAEEIKSDTPTSNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERR 344
Query: 354 KVLSKELGLTERQIKIWFQNRRMKLKR 380
+SK + LT+RQ+KIWFQNRRMKLK+
Sbjct: 345 LEISKSVNLTDRQVKIWFQNRRMKLKK 371
>gi|385654470|gb|AFI61972.1| Hox-A3b [Anguilla japonica]
Length = 412
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 172 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 227
>gi|332692479|gb|AEE90160.1| Homeobox A3b [Anguilla anguilla]
Length = 412
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 172 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 227
>gi|148666251|gb|EDK98667.1| homeobox A10, isoform CRA_a [Mus musculus]
Length = 399
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 318 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 377
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 378 MKLKKMN 384
>gi|344252753|gb|EGW08857.1| Homeobox protein Hox-A7 [Cricetulus griseus]
Length = 112
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 13 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 72
>gi|306965452|emb|CBK55567.1| ultrabithorax [Glomeris marginata]
Length = 335
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 245 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 301
Query: 385 MVVEYVKESSEARSASQKT 403
++ +KE +E +Q T
Sbjct: 302 --IQAIKELNEQEKQAQTT 318
>gi|440899267|gb|ELR50596.1| Homeobox protein Hox-A7, partial [Bos grunniens mutus]
Length = 237
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 189
>gi|1398927|gb|AAC52778.1| Hoxa3, partial [Mus musculus]
Length = 227
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 136 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 195
Query: 380 R 380
+
Sbjct: 196 K 196
>gi|14916593|sp|Q9IA21.1|HXA3_HETFR RecName: Full=Homeobox protein Hox-A3
gi|7271830|gb|AAF44641.1|AF224262_3 HoxA3 [Heterodontus francisci]
Length = 410
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 170 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 225
>gi|147900209|ref|NP_001081015.1| homeobox protein Hox-C6 [Xenopus laevis]
gi|123243|sp|P02832.2|HXC6_XENLA RecName: Full=Homeobox protein Hox-C6; AltName: Full=AC1; AltName:
Full=XlHbox-1
gi|64744|emb|CAA31021.1| unnamed protein product [Xenopus laevis]
gi|54038055|gb|AAH84319.1| XlHbox1 protein [Xenopus laevis]
Length = 234
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|319429384|gb|ADV56967.1| homeodomain protein HoxD3a [Hypophthalmichthys nobilis]
Length = 284
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 198
>gi|255742447|gb|ACU32561.1| homeobox protein HoxB7 [Callorhinchus milii]
Length = 211
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 139 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKA 198
Query: 385 MV 386
MV
Sbjct: 199 MV 200
>gi|194666358|ref|XP_872865.2| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|297473885|ref|XP_002686901.1| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|296488412|tpg|DAA30525.1| TPA: homeobox A7-like [Bos taurus]
Length = 238
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 189
>gi|3417239|emb|CAA64691.1| homeodomain protein [Girardia tigrina]
Length = 192
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 40/52 (76%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
R R Y+++Q+VELEKEF NYL RR LSK+L LTERQ+KIWFQNRRM
Sbjct: 75 RCRSAYTNNQLVELEKEFHYNNYLARGRRTELSKQLLLTERQVKIWFQNRRM 126
>gi|432881683|ref|XP_004073900.1| PREDICTED: homeobox protein Hox-A3a-like [Oryzias latipes]
gi|74267505|dbj|BAE44251.1| hoxA3a [Oryzias latipes]
gi|83016931|dbj|BAE53463.1| hoxA3a [Oryzias latipes]
Length = 416
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 170 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 225
>gi|395837229|ref|XP_003791543.1| PREDICTED: homeobox protein Hox-D10 [Otolemur garnettii]
Length = 410
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 329 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 388
Query: 376 MKLKR 380
MKLK+
Sbjct: 389 MKLKK 393
>gi|391341154|ref|XP_003744896.1| PREDICTED: uncharacterized protein LOC100900312 [Metaseiulus
occidentalis]
Length = 360
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ HQI+ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 174 RQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKK 229
>gi|360043143|emb|CCD78555.1| hox protein Smox1 [Schistosoma mansoni]
Length = 842
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 578 RTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQIKIWFQNRRMKWKKDH 635
>gi|256070808|ref|XP_002571734.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 578 RTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQIKIWFQNRRMKWKKDH 635
>gi|1708286|sp|P50901.1|HOX3_BRAFL RecName: Full=Homeobox protein HOX3
gi|5720|emb|CAA48180.1| Amphihox3 [Branchiostoma floridae]
Length = 411
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 137 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKK 192
>gi|154183828|gb|ABS70768.1| Hoxa3a [Haplochromis burtoni]
Length = 417
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 171 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 226
>gi|30046954|gb|AAH50839.1| Homeo box A10 [Mus musculus]
Length = 399
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 318 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 377
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 378 MKLKKMN 384
>gi|410896780|ref|XP_003961877.1| PREDICTED: homeobox protein Hox-D3a-like [Takifugu rubripes]
Length = 393
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 162 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 217
>gi|348522801|ref|XP_003448912.1| PREDICTED: homeobox protein Hox-A3a-like isoform 1 [Oreochromis
niloticus]
Length = 421
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 173 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 228
>gi|148234522|ref|NP_001091264.1| homeobox A9 [Xenopus laevis]
gi|122936364|gb|AAI30087.1| LOC100037070 protein [Xenopus laevis]
Length = 261
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRK 354
+LS K P ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR
Sbjct: 171 NLSNGDKAPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRY 226
Query: 355 VLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
+++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 227 EVARLLNLTERQVKIWFQNRRMKMKKINKD 256
>gi|969089|gb|AAA84409.1| UBXIIA [Drosophila melanogaster]
Length = 363
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 271 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 326
>gi|49169787|ref|NP_989926.1| homeobox protein Hox-A7 [Gallus gallus]
gi|363730028|ref|XP_003640750.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|363730175|ref|XP_003640779.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|60392400|sp|Q90VZ9.1|HXA7_CHICK RecName: Full=Homeobox protein Hox-A7
gi|15553502|gb|AAL01899.1|AF408695_1 homeodomain transcription factor HoxA-7 [Gallus gallus]
gi|13872753|emb|CAC37629.1| Hoxa-7 protein [Gallus gallus]
Length = 219
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 188
>gi|325260874|gb|ADZ04664.1| homeobox C6 [Notophthalmus viridescens]
Length = 234
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|330340401|ref|NP_001193361.1| homeobox A10 [Canis lupus familiaris]
Length = 413
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 332 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 392 MKLKKMN 398
>gi|198453089|ref|XP_001359066.2| Ubx, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|218512108|sp|P20822.3|UBX_DROPS RecName: Full=Homeotic protein ultrabithorax
gi|198132207|gb|EAL28209.2| Ubx, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 385
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 256 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 315
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 316 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 347
>gi|195146376|ref|XP_002014162.1| GL23004 [Drosophila persimilis]
gi|194103105|gb|EDW25148.1| GL23004 [Drosophila persimilis]
Length = 387
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 258 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 317
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 318 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 349
>gi|182764439|ref|NP_032289.2| homeobox protein Hox-A10 isoform a [Mus musculus]
gi|294862537|sp|P31310.4|HXA10_MOUSE RecName: Full=Homeobox protein Hox-A10; AltName: Full=Homeobox
protein Hox-1.8
Length = 416
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 335 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 394
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 395 MKLKKMN 401
>gi|170029603|ref|XP_001842681.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864000|gb|EDS27383.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 289
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 277 GLGASDSLSSEKDIPSN--LDLSQIPKPPPSSSH-TYSNQIHKNLLQCNTGRFRQVYSSH 333
GL A + DI N ++S+ P+ P S+ H T N ++ R RQ Y+ +
Sbjct: 151 GLAAQEPAGIISDIKKNPKHEISR-PRRPASALHWTSDNTLYARGANGLRRRGRQTYTRY 209
Query: 334 QIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 210 QTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 256
>gi|319429388|gb|ADV56969.1| homeodomain protein HoxD3a [Opsariichthys bidens]
Length = 287
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 146 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 201
>gi|224045308|ref|XP_002195243.1| PREDICTED: homeobox protein Hox-A9 [Taeniopygia guttata]
Length = 261
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L + R ++ Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 183 NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 242
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 243 FQNRRMKMKKINKD 256
>gi|121308835|dbj|BAF43724.1| transcription factor Hox5 [Metacrinus rotundus]
Length = 180
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+ H
Sbjct: 99 RSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKEH 156
>gi|410911100|ref|XP_003969028.1| PREDICTED: homeobox protein Hox-A3a-like isoform 1 [Takifugu
rubripes]
gi|119370772|sp|Q1KL12.1|HXA3A_FUGRU RecName: Full=Homeobox protein Hox-A3a
gi|94482762|gb|ABF22382.1| homeobox protein HoxA3a [Takifugu rubripes]
Length = 417
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 172 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 227
>gi|395830950|ref|XP_003788575.1| PREDICTED: homeobox protein Hox-A7 [Otolemur garnettii]
gi|202070729|gb|ACH95317.1| homeobox A7 (predicted) [Otolemur garnettii]
Length = 226
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 189
>gi|149033356|gb|EDL88157.1| homeo box A7 (mapped), isoform CRA_a [Rattus norvegicus]
Length = 108
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 10 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 69
>gi|3581956|emb|CAA64693.1| DthoxE [Girardia tigrina]
Length = 329
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 228 RSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKDH 285
>gi|224045306|ref|XP_002194801.1| PREDICTED: homeobox protein Hox-A7 [Taeniopygia guttata]
Length = 219
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 188
>gi|170649682|gb|ACB21267.1| homeobox A10 isoform a (predicted) [Callicebus moloch]
Length = 384
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 303 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 362
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 363 MKLKKMN 369
>gi|5002502|dbj|BAA78622.1| AmphiHox4 [Branchiostoma floridae]
Length = 275
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+T R R Y+ Q++ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 170 DTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 228
>gi|351713528|gb|EHB16447.1| Homeobox protein Hox-B3 [Heterocephalus glaber]
Length = 426
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 185 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 240
>gi|319429392|gb|ADV56971.1| homeodomain protein HoxD3a [Luciobrama macrocephalus]
Length = 286
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 145 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 200
>gi|301128877|emb|CBL59341.1| HoxA3 [Scyliorhinus canicula]
Length = 413
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 173 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 228
>gi|226822852|gb|ACO83087.1| homeobox A10 isoform a (predicted), 3 prime [Dasypus novemcinctus]
Length = 311
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 230 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 289
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 290 MKLKKMN 296
>gi|184185538|gb|ACC68939.1| homeobox A10 isoform a (predicted) [Rhinolophus ferrumequinum]
Length = 414
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 333 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 392
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 393 MKLKKMN 399
>gi|449268334|gb|EMC79203.1| Homeobox protein Hox-A7 [Columba livia]
Length = 219
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 188
>gi|1184169|gb|AAC50364.1| HOXA9, partial [Homo sapiens]
Length = 129
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 304 PSSSHTY---SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKE 359
PS++H + ++ N L + R ++ Y+ HQ +ELEKEF YL DRR +++
Sbjct: 40 PSTTHLHLVTADNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARL 99
Query: 360 LGLTERQIKIWFQNRRMKLKRTHPD 384
L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 100 LNLTERQVKIWFQNRRMKMKKINKD 124
>gi|260835439|ref|XP_002612716.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
gi|229298095|gb|EEN68725.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
Length = 275
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+T R R Y+ Q++ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 170 DTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 228
>gi|395830952|ref|XP_003788576.1| PREDICTED: homeobox protein Hox-A10 [Otolemur garnettii]
gi|202070731|gb|ACH95319.1| homeobox A10 isoform a (predicted) [Otolemur garnettii]
Length = 413
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 332 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 392 MKLKKMN 398
>gi|426227770|ref|XP_004007988.1| PREDICTED: homeobox protein Hox-A10 isoform 1 [Ovis aries]
Length = 413
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 332 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 392 MKLKKMN 398
>gi|325260881|gb|ADZ04670.1| homeobox D8 [Notophthalmus viridescens]
Length = 246
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 155 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 210
>gi|383849762|ref|XP_003700506.1| PREDICTED: homeobox protein abdominal-A homolog [Megachile
rotundata]
Length = 293
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 165 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 224
>gi|328710877|ref|XP_001944629.2| PREDICTED: homeobox protein abdominal-A homolog [Acyrthosiphon
pisum]
Length = 369
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 225 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 284
>gi|319429378|gb|ADV56964.1| homeodomain protein HoxD3a [Mylopharyngodon piceus]
Length = 289
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 148 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 203
>gi|213513676|ref|NP_001133030.1| homeobox protein HoxD10ab [Salmo salar]
gi|157816025|gb|ABV82031.1| homeobox protein HoxD10ab [Salmo salar]
gi|158702376|gb|ABW77562.1| homeobox protein HoxD10ab [Salmo salar]
Length = 338
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 257 NWLTATSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKGVNLTDRQVKIWFQNRR 316
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 317 MKLKKMN 323
>gi|66476114|gb|AAX63771.2| HoxD10ai [Oncorhynchus mykiss]
Length = 278
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 211 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKGVNLTDRQVKIWFQNRR 270
Query: 376 MKLKR 380
MKLK+
Sbjct: 271 MKLKK 275
>gi|213513255|ref|NP_001133000.1| homeobox protein HoxC6aa [Salmo salar]
gi|157815942|gb|ABV81990.1| homeobox protein HoxC6aa [Salmo salar]
gi|158702328|gb|ABW77519.1| homeobox protein HoxC6aa [Salmo salar]
Length = 231
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 146 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 201
>gi|119370798|sp|Q1KKS7.1|HXD3A_FUGRU RecName: Full=Homeobox protein Hox-D3a
gi|94482852|gb|ABF22467.1| homeobox protein HoxD3a [Takifugu rubripes]
Length = 408
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 177 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 232
>gi|405976604|gb|EKC41105.1| Homeobox protein Hox-B7 [Crassostrea gigas]
Length = 208
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 116 RTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHLLGLTERQIKIWFQNRRMKWKK 171
>gi|220898196|gb|ACL81451.1| HoxB8 [Latimeria menadoensis]
Length = 240
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>gi|47551187|ref|NP_999774.1| homeodomain protein [Strongylocentrotus purpuratus]
gi|2809211|gb|AAB97687.1| SpHbox7 [Strongylocentrotus purpuratus]
Length = 338
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 38/51 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS QI ELEKEF YL DRR LS+ L LTERQ+KIWFQNRRMK+K+
Sbjct: 201 YSKLQIYELEKEFTTNMYLTRDRRSKLSQALDLTERQVKIWFQNRRMKMKK 251
>gi|74267591|dbj|BAE44294.1| hoxD9b [Oryzias latipes]
gi|83016985|dbj|BAE53502.1| hoxD9b [Oryzias latipes]
Length = 307
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 302 PPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELG 361
PPP + ++ IH +T + R Y+ HQ +ELEKEF YL DRR ++ L
Sbjct: 222 PPPDPENPSASWIHAK----STRKKRCPYTKHQTLELEKEFLYNMYLTRDRRLEVAGLLN 277
Query: 362 LTERQIKIWFQNRRMKLKR 380
LTERQ+KIWFQNRRMK+K+
Sbjct: 278 LTERQVKIWFQNRRMKMKK 296
>gi|220898207|gb|ACL81461.1| HoxC6 [Latimeria menadoensis]
Length = 233
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|195500182|ref|XP_002097264.1| GE26127 [Drosophila yakuba]
gi|194183365|gb|EDW96976.1| GE26127 [Drosophila yakuba]
Length = 590
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 396 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455
>gi|213514426|ref|NP_001133007.1| homeobox protein HoxC6ab [Salmo salar]
gi|157815960|gb|ABV81999.1| homeobox protein HoxC6ab [Salmo salar]
gi|158702336|gb|ABW77526.1| homeobox protein HoxC6ab [Salmo salar]
Length = 228
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 144 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 199
>gi|38016605|gb|AAR07636.1| transcription factor Hox5 [Ptychodera flava]
Length = 238
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ +Q +ELEKEF YL RR ++ LGL+ERQIKIWFQNRRMK K+ H
Sbjct: 153 RSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEH 210
>gi|313253|emb|CAA51975.1| homeobox containing protein [Mus musculus]
Length = 411
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 181 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 236
>gi|400180336|gb|AFP73303.1| Hoxa9beta [Polyodon spathula]
Length = 257
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L ++ R ++ Y+ HQ +ELEKEF YL +RR ++++L LTERQ+KIWFQNRR
Sbjct: 184 NWLHASSTRKKRCPYTKHQTLELEKEFLFNMYLTRERRHEVARQLNLTERQVKIWFQNRR 243
Query: 376 MKLKRTHPD 384
MK+K+ + D
Sbjct: 244 MKMKKINKD 252
>gi|344270542|ref|XP_003407103.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A10-like
[Loxodonta africana]
Length = 415
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 334 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 393
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 394 MKLKKMN 400
>gi|269931711|gb|ACZ54375.1| homeobox A3 [Monodelphis domestica]
Length = 150
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 1 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 60
Query: 380 R 380
+
Sbjct: 61 K 61
>gi|195389682|ref|XP_002053505.1| ultrabithorax [Drosophila virilis]
gi|194151591|gb|EDW67025.1| ultrabithorax [Drosophila virilis]
Length = 378
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 249 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 308
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 309 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 340
>gi|195038397|ref|XP_001990646.1| GH19471 [Drosophila grimshawi]
gi|193894842|gb|EDV93708.1| GH19471 [Drosophila grimshawi]
Length = 382
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 253 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 312
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 313 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 344
>gi|194900573|ref|XP_001979830.1| GG16810 [Drosophila erecta]
gi|190651533|gb|EDV48788.1| GG16810 [Drosophila erecta]
Length = 592
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 396 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455
>gi|297262540|ref|XP_001108363.2| PREDICTED: hypothetical protein LOC704526 isoform 3 [Macaca
mulatta]
Length = 948
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 856 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 911
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 187 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 240
>gi|255755659|dbj|BAH96555.1| Homeodomain transcription factor [Balanoglossus simodensis]
Length = 262
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 39/51 (76%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS QI ELEKEF+ YL DRR LS+ L LTERQ+KIWFQNRRMKLK+
Sbjct: 161 YSKLQIFELEKEFQQNMYLTRDRRTRLSQTLNLTERQVKIWFQNRRMKLKK 211
>gi|86515340|ref|NP_001034497.1| ultrabithorax [Tribolium castaneum]
gi|18535622|gb|AAL71874.1| ultrabithorax [Tribolium castaneum]
gi|270002802|gb|EEZ99249.1| ultrabithorax [Tribolium castaneum]
Length = 314
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 225 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 280
>gi|301754115|ref|XP_002912919.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A10-like
[Ailuropoda melanoleuca]
Length = 301
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 220 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 279
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 280 MKLKKMN 286
>gi|296209375|ref|XP_002751496.1| PREDICTED: homeobox protein Hox-A10 [Callithrix jacchus]
gi|167427230|gb|ABZ80211.1| homeobox A10 isoform a (predicted) [Callithrix jacchus]
Length = 410
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 329 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 388
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 389 MKLKKMN 395
>gi|60392413|sp|Q8AWZ2.1|HXA3A_DANRE RecName: Full=Homeobox protein Hox-A3a
gi|23503779|emb|CAD52134.1| SI:dZ227P06.1 (homeo box A3a) [Danio rerio]
gi|49904267|gb|AAH76469.1| Hoxa3a protein [Danio rerio]
Length = 410
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 165 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 220
>gi|426337801|ref|XP_004032885.1| PREDICTED: homeobox protein Hox-D4 [Gorilla gorilla gorilla]
gi|146324934|sp|A1YER7.1|HXD4_GORGO RecName: Full=Homeobox protein Hox-D4
gi|120974087|gb|ABM46635.1| HOXD4 [Gorilla gorilla]
Length = 255
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|291391794|ref|XP_002712254.1| PREDICTED: homeobox D3 [Oryctolagus cuniculus]
Length = 2096
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 956 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 1011
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 326 FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R +S+ Q+ ELEKEF YL RR ++ L L + Q+KIWFQNRRMK K+
Sbjct: 2007 IRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKK 2061
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT--- 381
R R Y+ Q++ELEKEF YL RR ++ L L+ERQIKI
Sbjct: 138 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKICHPRPAFAADGQGPP 197
Query: 382 -HPDMVVEY--VKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIREHYERSAVPF- 437
PD ++E + S AR A + Q+ PA TS + S + + H RS PF
Sbjct: 198 HGPDDLIEAGTLGPSLPARPAEPRLQGQAGPAVTS-----LGSKKTGV--HRRRSTAPFR 250
Query: 438 ------------PASQPGEHPLATGELHGSPLEMQT 461
P + PGE ++ G L P EM++
Sbjct: 251 PGQRRASTSSGPPRTPPGEA-VSIGFLPCGPCEMRS 285
>gi|254212179|gb|ACT65754.1| Hoxa3 [Leucoraja erinacea]
Length = 411
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 171 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 226
>gi|149033353|gb|EDL88154.1| similar to Homeobox protein A10 (predicted) [Rattus norvegicus]
Length = 315
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 234 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 293
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 294 MKLKKMN 300
>gi|64742|emb|CAA31020.1| unnamed protein product [Xenopus laevis]
Length = 152
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 61 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 116
>gi|332692512|gb|AEE90189.1| Homeobox C6a [Anguilla anguilla]
gi|385654505|gb|AFI62002.1| Hox-C6a [Anguilla japonica]
Length = 233
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|332864948|ref|XP_003318415.1| PREDICTED: homeobox protein Hox-A10 isoform 2 [Pan troglodytes]
gi|410058710|ref|XP_003951020.1| PREDICTED: homeobox protein Hox-A10 [Pan troglodytes]
gi|410222850|gb|JAA08644.1| homeobox A10 [Pan troglodytes]
Length = 410
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 329 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 388
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 389 MKLKKMN 395
>gi|332209405|ref|XP_003253802.1| PREDICTED: homeobox protein Hox-D4 [Nomascus leucogenys]
Length = 255
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|328710879|ref|XP_001944459.2| PREDICTED: homeotic protein ultrabithorax-like [Acyrthosiphon
pisum]
Length = 339
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 252 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 307
>gi|397472855|ref|XP_003807949.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A10 [Pan
paniscus]
Length = 410
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 329 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 388
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 389 MKLKKMN 395
>gi|255755645|dbj|BAH96548.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ +Q +ELEKEF YL RR ++ LGL+ERQIKIWFQNRRMK K+ H
Sbjct: 155 RSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEH 212
>gi|34398401|gb|AAQ67269.1| ultrabithorax [Drosophila virilis]
Length = 387
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 258 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 317
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 318 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 349
>gi|24647534|ref|NP_732176.1| abdominal A, isoform B [Drosophila melanogaster]
gi|1708230|sp|P29555.2|ABDA_DROME RecName: Full=Homeobox protein abdominal-A
gi|969083|gb|AAA84405.1| ABD-AII [Drosophila melanogaster]
gi|23171502|gb|AAF55360.2| abdominal A, isoform B [Drosophila melanogaster]
Length = 590
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 396 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455
>gi|195349268|ref|XP_002041167.1| GM15405 [Drosophila sechellia]
gi|194122772|gb|EDW44815.1| GM15405 [Drosophila sechellia]
Length = 588
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 394 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 453
>gi|213511652|ref|NP_001135143.1| homeobox protein HoxA3aa [Salmo salar]
gi|157816047|gb|ABV82042.1| homeobox protein HoxA3aa [Salmo salar]
Length = 422
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 176 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 231
>gi|344249136|gb|EGW05240.1| Homeobox protein Hox-B8 [Cricetulus griseus]
Length = 156
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 60 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 115
>gi|146324933|sp|A2D4P8.1|HXD4_ATEGE RecName: Full=Homeobox protein Hox-D4
gi|146324935|sp|A2D5I1.1|HXD4_LAGLA RecName: Full=Homeobox protein Hox-D4
gi|122053832|gb|ABM65895.1| HOXD4 [Ateles geoffroyi]
gi|122934866|gb|ABM68173.1| HOXD4 [Lagothrix lagotricha]
Length = 255
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|28629673|gb|AAO43042.1| HoxD3 [Latimeria menadoensis]
Length = 248
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 15 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 70
>gi|397327518|gb|AFO42779.1| HOXD10 [Polyodon spathula]
Length = 334
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 253 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISQSVNLTDRQVKIWFQNRR 312
Query: 376 MKLKR 380
MKLK+
Sbjct: 313 MKLKK 317
>gi|123204569|gb|ABM73583.1| homeodomain protein [Megalobrama amblycephala]
Length = 243
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 10 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 65
>gi|125858467|ref|NP_001075038.1| homeobox protein Hox-D4 [Pan troglodytes]
gi|397489129|ref|XP_003815587.1| PREDICTED: homeobox protein Hox-D4 [Pan paniscus]
gi|146324936|sp|A1YFY3.1|HXD4_PANPA RecName: Full=Homeobox protein Hox-D4
gi|146324937|sp|A2T6X6.1|HXD4_PANTR RecName: Full=Homeobox protein Hox-D4
gi|121483828|gb|ABM54208.1| HOXD4 [Pan paniscus]
gi|124111109|gb|ABM91931.1| HOXD4 [Pan troglodytes]
gi|410218854|gb|JAA06646.1| homeobox D4 [Pan troglodytes]
Length = 255
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|296652|emb|CAA35237.1| hox 5.1 protein [Homo sapiens]
gi|189067017|dbj|BAG36610.1| unnamed protein product [Homo sapiens]
gi|208968521|dbj|BAG74099.1| homeobox D4 [synthetic construct]
Length = 255
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|5916192|gb|AAD55934.1|AF163858_1 homeoprotein CH-Hox3 [Chaetopterus variopedatus]
Length = 376
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 141 RARTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLTERQIKIWFQNRRMKYKK 196
>gi|403258699|ref|XP_003921888.1| PREDICTED: homeobox protein Hox-D4 [Saimiri boliviensis
boliviensis]
Length = 255
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|195394383|ref|XP_002055823.1| abd-A [Drosophila virilis]
gi|194142532|gb|EDW58935.1| abd-A [Drosophila virilis]
Length = 522
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 322 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 381
>gi|213510894|ref|NP_001135139.1| homeobox protein HoxC6ba [Salmo salar]
gi|157815980|gb|ABV82009.1| homeobox protein HoxC6ba [Salmo salar]
gi|158702348|gb|ABW77537.1| homeobox protein HoxC6ba [Salmo salar]
Length = 232
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|449477637|ref|XP_002188517.2| PREDICTED: homeobox protein Hox-C6-like, partial [Taeniopygia
guttata]
Length = 212
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 145 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 200
>gi|334349119|ref|XP_001365582.2| PREDICTED: homeobox protein Hox-A10-like [Monodelphis domestica]
Length = 419
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 338 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 397
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 398 MKLKKMN 404
>gi|299473907|gb|ADJ18236.1| Hox7 protein [Gibbula varia]
Length = 247
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 144 RTRQTYTRYQTLELEKEFHFNRYLTRRRRIEVAHMLGLTERQIKIWFQNRRMKWKK 199
>gi|195570283|ref|XP_002103138.1| GD20268 [Drosophila simulans]
gi|194199065|gb|EDX12641.1| GD20268 [Drosophila simulans]
Length = 631
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 437 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 496
>gi|2789672|gb|AAB96917.1| homeobox protein A10 [Homo sapiens]
gi|15559235|gb|AAH13971.1| Homeobox A10 [Homo sapiens]
gi|123982006|gb|ABM82832.1| homeobox A10 [synthetic construct]
gi|123996833|gb|ABM86018.1| homeobox A10 [synthetic construct]
gi|124000653|gb|ABM87835.1| homeobox A10 [synthetic construct]
gi|208968489|dbj|BAG74083.1| homeobox A10 [synthetic construct]
Length = 393
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 312 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 371
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 372 MKLKKMN 378
>gi|348522803|ref|XP_003448913.1| PREDICTED: homeobox protein Hox-A3a-like isoform 2 [Oreochromis
niloticus]
Length = 407
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 159 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 214
>gi|319429380|gb|ADV56965.1| homeodomain protein HoxD3a [Ctenopharyngodon idella]
Length = 288
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 147 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 202
>gi|255742437|gb|ACU32552.1| homeobox protein HoxA3 [Callorhinchus milii]
Length = 409
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 169 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 224
>gi|182765442|ref|NP_061824.3| homeobox protein Hox-A10 [Homo sapiens]
gi|294862509|sp|P31260.3|HXA10_HUMAN RecName: Full=Homeobox protein Hox-A10; AltName: Full=Homeobox
protein Hox-1.8; AltName: Full=Homeobox protein Hox-1H;
AltName: Full=PL
gi|119614290|gb|EAW93884.1| homeobox A10, isoform CRA_b [Homo sapiens]
Length = 410
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 329 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 388
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 389 MKLKKMN 395
>gi|3237298|gb|AAC23704.1| HOXA-9A [Homo sapiens]
Length = 198
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 304 PSSSHTY---SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKE 359
PS++H + ++ N L + R ++ Y+ HQ +ELEKEF YL DRR +++
Sbjct: 109 PSTTHLHLVTADNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARL 168
Query: 360 LGLTERQIKIWFQNRRMKLKRTHPD 384
L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 169 LNLTERQVKIWFQNRRMKMKKINKD 193
>gi|319429390|gb|ADV56970.1| homeodomain protein HoxD3a [Ochetobius elongatus]
Length = 296
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 155 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 210
>gi|146324938|sp|A1YFD8.1|HXD4_SAGLB RecName: Full=Homeobox protein Hox-D4
gi|121221996|gb|ABM47600.1| HOXD4 [Saguinus labiatus]
Length = 255
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|8650523|gb|AAF78248.1|AF275310_1 Hox5 [Haliotis rufescens]
Length = 281
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 40/60 (66%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
T R R Y+ HQ +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 196 TKRSRTSYTRHQTLELEKEFHYNKYLTRRRRIEIAHALNLTERQIKIWFQNRRMKWKKEH 255
>gi|74267563|dbj|BAE44280.1| hoxC6a [Oryzias latipes]
gi|83016965|dbj|BAE53488.1| hoxC6a [Oryzias latipes]
Length = 233
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 141 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 196
>gi|380014418|ref|XP_003691229.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein abdominal-A
homolog [Apis florea]
Length = 395
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 267 CPRRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 326
>gi|332692522|gb|AEE90198.1| Homeobox C8b [Anguilla anguilla]
gi|385654515|gb|AFI62011.1| Hox-C8b [Anguilla japonica]
Length = 246
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|62958699|gb|AAY23665.1| Hox protein [Oreochromis niloticus]
Length = 247
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 14 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 69
>gi|385654491|gb|AFI61990.1| Hox-B6b [Anguilla japonica]
Length = 227
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 322 NTGR-FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
NTGR RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 147 NTGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 206
>gi|359754089|gb|AEV59512.1| HOXA10 [Macropus eugenii]
Length = 416
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 335 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 394
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 395 MKLKKMN 401
>gi|332839192|ref|XP_003313690.1| PREDICTED: homeobox protein Hox-C8 [Pan troglodytes]
Length = 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|195107232|ref|XP_001998219.1| GI23753 [Drosophila mojavensis]
gi|193914813|gb|EDW13680.1| GI23753 [Drosophila mojavensis]
Length = 529
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 332 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 391
>gi|195038659|ref|XP_001990774.1| GH18074 [Drosophila grimshawi]
gi|193894970|gb|EDV93836.1| GH18074 [Drosophila grimshawi]
Length = 529
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 332 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 391
>gi|213515506|ref|NP_001133013.1| homeobox protein HoxC8ba [Salmo salar]
gi|157815978|gb|ABV82008.1| homeobox protein HoxC8ba [Salmo salar]
gi|158702347|gb|ABW77536.1| homeobox protein HoxC8ba [Salmo salar]
Length = 258
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|432865300|ref|XP_004070515.1| PREDICTED: homeobox protein Hox-C6a-like [Oryzias latipes]
Length = 234
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 142 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 197
>gi|26984638|emb|CAD59115.1| SI:dZ254O17.5 (homeo box protein B4a) [Danio rerio]
Length = 244
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 281 SDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQ-------------------IHKNLLQC 321
+ +LS+ PS+ S P PPP+ T ++Q +H N++
Sbjct: 83 TTALSTPLPEPSHHCDSVTPSPPPACGQTPTSQNTSTVSSRKDPVVYPWMKKVHVNIVSP 142
Query: 322 NTG-----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
N R R Y+ Q++ELEKEF YL RR ++ L L+ERQIKIWFQNRRM
Sbjct: 143 NYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRM 202
Query: 377 KLKRTHPDMVVEYVKESSEARSASQKTNHQSAPA 410
K K+ H +++ RS S TN P
Sbjct: 203 KWKKDH-------KLPNTKIRSNSASTNSSGCPT 229
>gi|254692758|dbj|BAH23874.2| transcription factor Hox5 [Balanoglossus misakiensis]
Length = 241
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ +Q +ELEKEF YL RR ++ LGL+ERQIKIWFQNRRMK K+ H
Sbjct: 153 RSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEH 210
>gi|154183818|gb|ABS70759.1| Hoxc6a [Haplochromis burtoni]
Length = 234
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 142 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 197
>gi|328778463|ref|XP_394120.4| PREDICTED: homeobox protein abdominal-A homolog isoform 1 [Apis
mellifera]
Length = 396
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 267 CPRRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 326
>gi|358254519|dbj|GAA55671.1| homeobox protein Hox-B4a [Clonorchis sinensis]
Length = 763
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
+T R R Y+ QI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 459 DTKRTRTAYTRQQILELEKEFHYNKYLTRKRRLEIAHTLTLSERQIKIWFQNRRMKWKKE 518
Query: 382 H--PDMVVEYVKESSEARSASQKTNHQSAP 409
H P M + E RS NH P
Sbjct: 519 HHLPGMKQRLI----EPRSPVTSRNHHLCP 544
>gi|348521442|ref|XP_003448235.1| PREDICTED: homeobox protein Hox-C6a-like [Oreochromis niloticus]
Length = 234
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 142 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 197
>gi|195451407|ref|XP_002072904.1| GK13853 [Drosophila willistoni]
gi|194168989|gb|EDW83890.1| GK13853 [Drosophila willistoni]
Length = 582
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 383 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 442
>gi|157816067|gb|ABV82052.1| homeobox protein HoxA3ab [Salmo salar]
Length = 422
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 175 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 230
>gi|13516212|gb|AAC31190.2| homeodomain-containing DNA binding protein 12 [Holothuria
glaberrima]
Length = 239
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 39/51 (76%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS QI ELEKEF+ YL DRR LS+ L LTERQ+KIWFQNRRMKLK+
Sbjct: 182 YSKLQIYELEKEFQHNMYLTRDRRAKLSQTLSLTERQVKIWFQNRRMKLKK 232
>gi|395519807|ref|XP_003764033.1| PREDICTED: homeobox protein Hox-D4 [Sarcophilus harrisii]
Length = 238
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 15/108 (13%)
Query: 290 IPSNLDLSQ---IPKPP-------PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQ 334
IPS+ SQ + +PP P+ + + ++H N + N TG R R Y+ Q
Sbjct: 99 IPSSRACSQPASLKQPPNGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQ 158
Query: 335 IVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 159 VLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 206
>gi|351704297|gb|EHB07216.1| Homeobox protein Hox-A7 [Heterocephalus glaber]
Length = 232
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 189
>gi|426238968|ref|XP_004013408.1| PREDICTED: homeobox protein Hox-B8 [Ovis aries]
Length = 142
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 47 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 102
>gi|410899256|ref|XP_003963113.1| PREDICTED: homeobox protein Hox-C6a-like [Takifugu rubripes]
gi|82227628|sp|O42504.1|HXC6A_FUGRU RecName: Full=Homeobox protein Hox-C6a; AltName: Full=FrHOXC-6
gi|2341089|gb|AAB68682.1| homeobox protein HOXC-6 [Takifugu rubripes]
gi|94482830|gb|ABF22446.1| homeobox protein HoxC6a [Takifugu rubripes]
Length = 236
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 142 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 197
>gi|59939333|gb|AAX12425.1| Dbuz\abd-A-PB [Drosophila buzzatii]
Length = 536
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 339 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 398
>gi|21362261|ref|NP_034596.1| homeobox protein Hox-C8 [Mus musculus]
gi|309319783|ref|NP_001170797.2| homeobox protein Hox-C8 [Rattus norvegicus]
gi|297466159|ref|XP_002704291.1| PREDICTED: homeobox protein Hox-C8 [Bos taurus]
gi|297474428|ref|XP_002687278.1| PREDICTED: homeobox protein Hox-C8 [Bos taurus]
gi|332207728|ref|XP_003252948.1| PREDICTED: homeobox protein Hox-C8 [Nomascus leucogenys]
gi|395744374|ref|XP_003778096.1| PREDICTED: homeobox protein Hox-C8 [Pongo abelii]
gi|395835045|ref|XP_003790495.1| PREDICTED: homeobox protein Hox-C8 [Otolemur garnettii]
gi|397521941|ref|XP_003831041.1| PREDICTED: homeobox protein Hox-C8 [Pan paniscus]
gi|402886199|ref|XP_003906525.1| PREDICTED: homeobox protein Hox-C8 [Papio anubis]
gi|403296833|ref|XP_003939299.1| PREDICTED: homeobox protein Hox-C8 [Saimiri boliviensis
boliviensis]
gi|410964583|ref|XP_003988833.1| PREDICTED: homeobox protein Hox-C8 [Felis catus]
gi|426224346|ref|XP_004006332.1| PREDICTED: homeobox protein Hox-C8 [Ovis aries]
gi|123275|sp|P09025.2|HXC8_MOUSE RecName: Full=Homeobox protein Hox-C8; AltName: Full=Homeobox
protein Hox-3.1; AltName: Full=Homeobox protein M31
gi|51403|emb|CAA30486.1| unnamed protein product [Mus musculus]
gi|51407|emb|CAA30319.1| unnamed protein product [Mus musculus]
gi|193979|gb|AAA37857.1| Hox-3.1 protein [Mus musculus]
gi|148671997|gb|EDL03944.1| homeobox C8 [Mus musculus]
gi|157170186|gb|AAI52854.1| Homeo box C8 [synthetic construct]
gi|281342176|gb|EFB17760.1| hypothetical protein PANDA_012613 [Ailuropoda melanoleuca]
gi|290461969|gb|ACF33180.2| homeobox C8 [Ovis aries]
gi|296487929|tpg|DAA30042.1| TPA: homeobox C8-like [Bos taurus]
gi|351706135|gb|EHB09054.1| Homeobox protein Hox-C8 [Heterocephalus glaber]
gi|355564295|gb|EHH20795.1| Homeobox protein Hox-3A [Macaca mulatta]
gi|355786153|gb|EHH66336.1| Homeobox protein Hox-3A [Macaca fascicularis]
gi|410223818|gb|JAA09128.1| homeobox C8 [Pan troglodytes]
gi|410261474|gb|JAA18703.1| homeobox C8 [Pan troglodytes]
gi|431921606|gb|ELK18958.1| Homeobox protein Hox-C8 [Pteropus alecto]
gi|440900714|gb|ELR51792.1| Homeobox protein Hox-C8 [Bos grunniens mutus]
Length = 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|344266083|ref|XP_003405110.1| PREDICTED: homeobox protein Hox-C8-like [Loxodonta africana]
Length = 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|332692511|gb|AEE90188.1| Homeobox C8a [Anguilla anguilla]
gi|385654504|gb|AFI62001.1| Hox-C8a [Anguilla japonica]
Length = 252
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|18858827|ref|NP_571609.1| homeobox protein Hox-A3a [Danio rerio]
gi|4322058|gb|AAD15938.1| homeobox protein [Danio rerio]
Length = 411
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 166 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 221
>gi|359754118|gb|AEV59538.1| HOXD4 [Macropus eugenii]
Length = 238
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 15/108 (13%)
Query: 290 IPSNLDLSQ---IPKPP-------PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQ 334
IPS+ SQ + +PP P+ + + ++H N + N TG R R Y+ Q
Sbjct: 99 IPSSRACSQSASLKQPPNGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQ 158
Query: 335 IVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 159 VLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 206
>gi|348517819|ref|XP_003446430.1| PREDICTED: homeobox protein Hox-B4a-like [Oreochromis niloticus]
Length = 258
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 308 HTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGL 362
+ + ++H N++ N TG R R Y+ Q++ELEKEF YL RR ++ L L
Sbjct: 147 YPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCL 206
Query: 363 TERQIKIWFQNRRMKLKRTH 382
+ERQIKIWFQNRRMK K+ H
Sbjct: 207 SERQIKIWFQNRRMKWKKDH 226
>gi|347972355|ref|XP_001231056.3| AGAP004647-PA [Anopheles gambiae str. PEST]
gi|333469404|gb|EAU76428.3| AGAP004647-PA [Anopheles gambiae str. PEST]
Length = 431
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R R ++S Q+VELEKEF YL RR L+++L LTERQIKIWFQNRRMK K+
Sbjct: 35 TKRSRTAFTSSQLVELEKEFHSNRYLCRPRRIELTRKLALTERQIKIWFQNRRMKHKK 92
>gi|444513898|gb|ELV10483.1| Homeobox protein Hox-C8 [Tupaia chinensis]
Length = 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|209867704|gb|ACI90390.1| Hox-6c [Philodina roseola]
Length = 108
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS HQ +ELEKEF T YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 29 RTRQTYSRHQTLELEKEFHYTKYLTRRRRIEIAHNLQLTERQIKIWFQNRRMKWKK 84
>gi|12056969|ref|NP_073149.1| homeobox protein Hox-C8 [Homo sapiens]
gi|13124745|sp|P31273.2|HXC8_HUMAN RecName: Full=Homeobox protein Hox-C8; AltName: Full=Homeobox
protein Hox-3A
gi|11993923|gb|AAG42146.1| HOXC8 [Homo sapiens]
gi|31753106|gb|AAH53898.1| Homeobox C8 [Homo sapiens]
gi|119617149|gb|EAW96743.1| homeobox C8 [Homo sapiens]
gi|158255354|dbj|BAF83648.1| unnamed protein product [Homo sapiens]
gi|208968511|dbj|BAG74094.1| homeobox C8 [synthetic construct]
Length = 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|3551781|gb|AAC34742.1| homeobox transcription factor [Ambystoma mexicanum]
Length = 123
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRF-RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR R Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 42 NWLTAKSGRKKRSPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 101
Query: 376 MKLKR 380
MKLK+
Sbjct: 102 MKLKK 106
>gi|390178469|ref|XP_003736653.1| Ubx, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859455|gb|EIM52726.1| Ubx, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 360
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 267 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 322
>gi|332692498|gb|AEE90177.1| Homeobox B6b [Anguilla anguilla]
Length = 227
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 322 NTGR-FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
NTGR RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 147 NTGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 206
>gi|299473903|gb|ADJ18234.1| Hox5 protein [Gibbula varia]
Length = 267
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 39/58 (67%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ HQ +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 183 RSRTSYTRHQTLELEKEFHYNKYLTRRRRIEIAHALNLTERQIKIWFQNRRMKWKKDH 240
>gi|165873659|gb|ABY67954.1| hox3 protein [Capitella teleta]
Length = 406
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 179 RARTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLTERQIKIWFQNRRMKYKK 234
>gi|195110393|ref|XP_001999766.1| GI24708 [Drosophila mojavensis]
gi|193916360|gb|EDW15227.1| GI24708 [Drosophila mojavensis]
Length = 379
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTG------RFRQVYSSHQIVELEKEFRLTNYL 348
DL+Q YS + +LL G R RQ Y+ +Q +ELEKEF +YL
Sbjct: 250 DLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYL 309
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 310 TRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 341
>gi|426372798|ref|XP_004053303.1| PREDICTED: homeobox protein Hox-C8 [Gorilla gorilla gorilla]
Length = 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|213982843|ref|NP_001135589.1| homeobox D8 [Xenopus (Silurana) tropicalis]
gi|195540199|gb|AAI68107.1| Unknown (protein for MGC:186068) [Xenopus (Silurana) tropicalis]
Length = 231
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 141 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 196
>gi|449266232|gb|EMC77311.1| Homeobox protein Hox-D4 [Columba livia]
Length = 237
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 290 IPSNLDLSQIP--KPP-------PSSSHTYSNQIHKNLLQCNTG-----RFRQVYSSHQI 335
+P++ SQ P KPP P+ + + ++H N + N R R Y+ Q+
Sbjct: 99 MPNSRACSQQPALKPPNGSAVKQPAVVYPWMKKVHVNSVNPNYNGGEPKRSRTAYTRQQV 158
Query: 336 VELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 159 LELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 205
>gi|195570298|ref|XP_002103144.1| ultrabithorax [Drosophila simulans]
gi|194199071|gb|EDX12647.1| ultrabithorax [Drosophila simulans]
Length = 338
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 246 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 301
>gi|405109806|emb|CCH51005.1| fushi tarazu, partial [Phalangium opilio]
Length = 281
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 219 RTRQTYTRIQTLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKAKK 274
>gi|395835047|ref|XP_003790496.1| PREDICTED: homeobox protein Hox-C6 [Otolemur garnettii]
Length = 235
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|345489557|ref|XP_003426162.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein abdominal-A
homolog [Nasonia vitripennis]
Length = 413
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 277 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 336
>gi|332692487|gb|AEE90167.1| Homeobox B7a [Anguilla anguilla]
Length = 220
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 14/86 (16%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 140 RGRQTYTRYQTLELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKWKK---- 195
Query: 385 MVVEYVKESSEARSASQKTNHQSAPA 410
E +SA Q +N + PA
Sbjct: 196 ----------ENKSADQSSNAEDKPA 211
>gi|18858835|ref|NP_571193.1| homeobox protein Hox-B4a [Danio rerio]
gi|60392407|sp|P22574.3|HXB4A_DANRE RecName: Full=Homeobox protein Hox-B4a; Short=Hox-B4; AltName:
Full=Homeobox protein Zf-13
gi|4322072|gb|AAD15945.1| homeobox protein [Danio rerio]
gi|190337053|gb|AAI62840.1| Homeo box B4a [Danio rerio]
gi|190337059|gb|AAI62844.1| Homeo box B4a [Danio rerio]
Length = 246
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 281 SDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQ-------------------IHKNLLQC 321
+ +LS+ PS+ S P PPP+ T ++Q +H N++
Sbjct: 85 TTALSTPLPEPSHHCDSVTPSPPPACGQTPTSQNTSTVSSRKDPVVYPWMKKVHVNIVSP 144
Query: 322 NTG-----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
N R R Y+ Q++ELEKEF YL RR ++ L L+ERQIKIWFQNRRM
Sbjct: 145 NYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRM 204
Query: 377 KLKRTHPDMVVEYVKESSEARSASQKTNHQSAPA 410
K K+ H +++ RS S TN P
Sbjct: 205 KWKKDH-------KLPNTKIRSNSASTNSSGCPT 231
>gi|345323602|ref|XP_001509584.2| PREDICTED: homeobox protein Hox-A10-like [Ornithorhynchus anatinus]
Length = 406
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 325 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 384
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 385 MKLKKMN 391
>gi|344266085|ref|XP_003405111.1| PREDICTED: homeobox protein Hox-C6-like [Loxodonta africana]
gi|444513899|gb|ELV10484.1| Homeobox protein Hox-C6 [Tupaia chinensis]
Length = 235
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|220898212|gb|ACL81465.1| HoxD10 [Latimeria menadoensis]
Length = 337
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 256 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVNLTDRQVKIWFQNRR 315
Query: 376 MKLKR 380
MKLK+
Sbjct: 316 MKLKK 320
>gi|325260873|gb|ADZ04663.1| homeobox C8 [Notophthalmus viridescens]
Length = 244
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 154 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 207
>gi|354490229|ref|XP_003507262.1| PREDICTED: homeobox protein Hox-C8-like, partial [Cricetulus
griseus]
Length = 214
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 125 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 178
>gi|347972377|ref|XP_003436886.1| AGAP004662-PB [Anopheles gambiae str. PEST]
gi|333467596|gb|EGK96614.1| AGAP004662-PB [Anopheles gambiae str. PEST]
Length = 370
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 198 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 257
>gi|332692495|gb|AEE90174.1| Homeobox B9b [Anguilla anguilla]
Length = 247
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L + R ++ Y+ +Q +ELEKEF YL DRR ++++L LTERQ+KIW
Sbjct: 170 NNPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARQLNLTERQVKIW 229
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 230 FQNRRMKMKKMNKD 243
>gi|255742432|gb|ACU32547.1| homeobox protein HoxA9 [Callorhinchus milii]
Length = 259
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L + R ++ YS HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRR
Sbjct: 185 NWLHARSTRKKRCPYSKHQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRR 244
Query: 376 MKLKR 380
MK+K+
Sbjct: 245 MKMKK 249
>gi|198453096|ref|XP_002137595.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
gi|198132210|gb|EDY68153.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
Length = 560
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 370 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 429
>gi|55742132|ref|NP_001006787.1| homeobox C8 [Xenopus (Silurana) tropicalis]
gi|49523091|gb|AAH75597.1| homeobox C8 [Xenopus (Silurana) tropicalis]
gi|89267398|emb|CAJ82460.1| homeo box C8 [Xenopus (Silurana) tropicalis]
Length = 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|390467745|ref|XP_003733816.1| PREDICTED: homeobox protein Hox-C8-like [Callithrix jacchus]
Length = 220
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 131 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 184
>gi|363746032|ref|XP_003643502.1| PREDICTED: homeobox protein Hox-C6-like [Gallus gallus]
Length = 237
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|253828367|gb|ACT36589.1| Anthox8b, partial [Nematostella vectensis]
Length = 157
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
++ R R Y++ Q++ELEKEF YL S RR+ +SK L LTERQ+KIWFQNRRMK K+
Sbjct: 62 SSKRHRTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQVKIWFQNRRMKWKKD 121
Query: 382 HPDMVVEYVKESSEARSASQKTNHQSAPADTSAP 415
K+ +E ++Q+ N + P + P
Sbjct: 122 E--------KQKTEDCYSAQQYNIEEIPFLSLTP 147
>gi|189217644|ref|NP_001121270.1| homeobox C8 [Xenopus laevis]
gi|115528658|gb|AAI24878.1| LOC100158353 protein [Xenopus laevis]
Length = 244
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|432908471|ref|XP_004077877.1| PREDICTED: homeobox protein Hox-A10b-like [Oryzias latipes]
gi|74267525|dbj|BAE44261.1| hoxA10b [Oryzias latipes]
gi|83016938|dbj|BAE53468.1| hoxA10b [Oryzias latipes]
Length = 320
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 313 QIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWF 371
++ N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWF
Sbjct: 235 EVAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWF 294
Query: 372 QNRRMKLKR 380
QNRRMKLK+
Sbjct: 295 QNRRMKLKK 303
>gi|410911102|ref|XP_003969029.1| PREDICTED: homeobox protein Hox-A3a-like isoform 2 [Takifugu
rubripes]
Length = 404
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 159 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 214
>gi|359754109|gb|AEV59530.1| HOXC8 [Macropus eugenii]
Length = 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|158702240|gb|ABW77451.1| homeobox protein HoxA7ab [Salmo salar]
Length = 253
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 41/63 (65%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
N R RQ Y +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 126 NRKRGRQTYPRYQTLELEKEFHFNRYLNRRRRVEIAHVLCLTERQIKIWFQNRRMKWKKD 185
Query: 382 HPD 384
H D
Sbjct: 186 HKD 188
>gi|291290915|ref|NP_001167488.1| homeobox B9 [Xenopus laevis]
gi|76779965|gb|AAI06422.1| Unknown (protein for MGC:131095) [Xenopus laevis]
Length = 232
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 309 TYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQI 367
T+ N N L + R ++ YS +Q +ELEKEF YL DRR +++ L L+ERQ+
Sbjct: 152 THQNNPSANWLHARSSRKKRCPYSKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQV 211
Query: 368 KIWFQNRRMKLKRTHPD 384
KIWFQNRRMK+K+ + D
Sbjct: 212 KIWFQNRRMKMKKLNKD 228
>gi|28629677|gb|AAO43044.1| HoxD8 [Latimeria menadoensis]
Length = 223
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQIKIWFQNRRMK K+
Sbjct: 132 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHSLGLTERQIKIWFQNRRMKWKK 187
>gi|402888721|ref|XP_003907700.1| PREDICTED: homeobox protein Hox-D4 [Papio anubis]
Length = 255
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|345327993|ref|XP_001515131.2| PREDICTED: homeobox protein Hox-D8-like, partial [Ornithorhynchus
anatinus]
Length = 267
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 176 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 231
>gi|259013406|ref|NP_001158410.1| homeobox 5 [Saccoglossus kowalevskii]
gi|116574502|gb|ABK00019.1| hox 5 [Saccoglossus kowalevskii]
Length = 243
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ +Q +ELEKEF YL RR ++ LGL+ERQIKIWFQNRRMK K+ H
Sbjct: 153 RSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEH 210
>gi|195146386|ref|XP_002014167.1| GL23002 [Drosophila persimilis]
gi|194103110|gb|EDW25153.1| GL23002 [Drosophila persimilis]
Length = 562
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 372 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 431
>gi|194742540|ref|XP_001953759.1| GF17922 [Drosophila ananassae]
gi|190626796|gb|EDV42320.1| GF17922 [Drosophila ananassae]
Length = 596
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 398 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 457
>gi|359754119|gb|AEV59539.1| HOXD8 [Macropus eugenii]
Length = 308
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 217 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 272
>gi|255755655|dbj|BAH96553.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 230
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R+ Y+ +Q +ELEKEF YL DRR +S+ L LTERQ+KIWFQNRRMKLK+
Sbjct: 154 RKPYTKYQTLELEKEFLYNMYLTRDRRTDISRALNLTERQVKIWFQNRRMKLKK 207
>gi|18858851|ref|NP_571198.1| homeobox protein Hox-C6a [Danio rerio]
gi|60392438|sp|P15862.2|HXC6A_DANRE RecName: Full=Homeobox protein Hox-C6a; Short=Hox-C6; AltName:
Full=Homeobox protein Zf-61
gi|4322098|gb|AAD15958.1| homeobox protein [Danio rerio]
Length = 231
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 144 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 199
>gi|387914958|gb|AFK11088.1| homeobox protein HoxA9 [Callorhinchus milii]
Length = 278
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L + R ++ YS HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRR
Sbjct: 204 NWLHARSTRKKRCPYSKHQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRR 263
Query: 376 MKLKR 380
MK+K+
Sbjct: 264 MKMKK 268
>gi|148227570|ref|NP_001083341.1| homeobox D8 [Xenopus laevis]
gi|38014744|gb|AAH60408.1| MGC68588 protein [Xenopus laevis]
Length = 233
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 143 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 198
>gi|47229430|emb|CAF99418.1| unnamed protein product [Tetraodon nigroviridis]
Length = 692
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 611 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVHLTDRQVKIWFQNRR 670
Query: 376 MKLKR 380
MKLK+
Sbjct: 671 MKLKK 675
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
YS +QI ELE+EF + Y+ ++R LS+ L LT+RQ+KIWFQNRRMK K+ + D
Sbjct: 225 YSKYQIRELEREFFFSVYINKEKRMQLSRMLNLTDRQVKIWFQNRRMKEKKLNRD 279
>gi|148234492|ref|NP_001082538.1| homeobox protein Hox-A7 [Xenopus laevis]
gi|123281|sp|P09071.1|HXA7_XENLA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Xhox-36;
AltName: Full=XlHbox-3
gi|537600|gb|AAA49753.1| homeobox protein [Xenopus laevis]
gi|213626867|gb|AAI70290.1| Homeobox protein [Xenopus laevis]
gi|213626991|gb|AAI70546.1| Homeobox protein [Xenopus laevis]
Length = 209
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 124 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 181
>gi|405967565|gb|EKC32713.1| Homeobox protein Hox-B4a [Crassostrea gigas]
Length = 251
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 43/66 (65%)
Query: 317 NLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
N L + R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRM
Sbjct: 151 NSLVSESKRNRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRM 210
Query: 377 KLKRTH 382
K K+ H
Sbjct: 211 KWKKEH 216
>gi|126326347|ref|XP_001368563.1| PREDICTED: homeobox protein Hox-D8-like [Monodelphis domestica]
Length = 307
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 216 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 271
>gi|51476|emb|CAA34518.1| unnamed protein product [Mus musculus]
gi|241279|gb|AAB20717.1| homeobox protein 3.3 [Mus sp.]
Length = 235
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|220898208|gb|ACL81462.1| HoxC8 [Latimeria menadoensis]
Length = 239
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|384940632|gb|AFI33921.1| homeobox protein Hox-D4 [Macaca mulatta]
gi|387540532|gb|AFJ70893.1| homeobox protein Hox-D4 [Macaca mulatta]
Length = 255
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 283 SLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVE 337
S S K P L Q P+ + + ++H N + N TG R R Y+ Q++E
Sbjct: 114 SQSDPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLE 168
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 169 LEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 213
>gi|4758554|ref|NP_004494.1| homeobox protein Hox-C6 isoform 1 [Homo sapiens]
gi|114145519|ref|NP_034595.2| homeobox protein Hox-C6 [Mus musculus]
gi|332839194|ref|XP_003313691.1| PREDICTED: homeobox protein Hox-C6 [Pan troglodytes]
gi|390467697|ref|XP_002752511.2| PREDICTED: homeobox protein Hox-C6-like [Callithrix jacchus]
gi|392341720|ref|XP_001069410.2| PREDICTED: homeobox protein Hox-C6 isoform 1 [Rattus norvegicus]
gi|392349763|ref|XP_003750463.1| PREDICTED: homeobox protein Hox-C6 [Rattus norvegicus]
gi|395744376|ref|XP_002823404.2| PREDICTED: homeobox protein Hox-C6 [Pongo abelii]
gi|397521943|ref|XP_003831042.1| PREDICTED: homeobox protein Hox-C6 [Pan paniscus]
gi|402886201|ref|XP_003906526.1| PREDICTED: homeobox protein Hox-C6 [Papio anubis]
gi|403296835|ref|XP_003939300.1| PREDICTED: homeobox protein Hox-C6 [Saimiri boliviensis
boliviensis]
gi|426372802|ref|XP_004053305.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Gorilla gorilla
gorilla]
gi|400007|sp|P10629.2|HXC6_MOUSE RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein Hox-3.3; AltName: Full=Homeobox protein Hox-6.1
gi|115502398|sp|P09630.3|HXC6_HUMAN RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein CP25; AltName: Full=Homeobox protein HHO.C8;
AltName: Full=Homeobox protein Hox-3C
gi|7446275|pir||S72429 homeotic protein HOX C6 (clone 211) - human
gi|1836128|gb|AAB46892.1| homeodomain-containing protein [Homo sapiens]
gi|49901568|gb|AAH74845.1| Homeobox C6 [Homo sapiens]
gi|49902099|gb|AAH74844.1| Homeobox C6 [Homo sapiens]
gi|119617153|gb|EAW96747.1| homeobox C6, isoform CRA_b [Homo sapiens]
gi|148671996|gb|EDL03943.1| homeobox C6 [Mus musculus]
gi|149031890|gb|EDL86802.1| homeo box C6 [Rattus norvegicus]
gi|187954707|gb|AAI41062.1| Homeo box C6 [Mus musculus]
gi|306921741|dbj|BAJ17950.1| homeobox C6 [synthetic construct]
gi|355564296|gb|EHH20796.1| Homeobox protein Hox-3C [Macaca mulatta]
gi|355786154|gb|EHH66337.1| Homeobox protein Hox-3C [Macaca fascicularis]
gi|410226590|gb|JAA10514.1| homeobox C6 [Pan troglodytes]
gi|410255858|gb|JAA15896.1| homeobox C6 [Pan troglodytes]
gi|410348018|gb|JAA40758.1| homeobox C6 [Pan troglodytes]
Length = 235
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|449268336|gb|EMC79205.1| Homeobox protein Hox-A10 [Columba livia]
Length = 362
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 281 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRR 340
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 341 MKLKKMN 347
>gi|392301351|gb|AFM55061.1| ultrabithorax, partial [Microvelia sp. AK-2011a]
Length = 245
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 186 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 241
>gi|255742464|gb|ACU32577.1| homeobox protein HoxC6 [Callorhinchus milii]
Length = 219
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|158702226|gb|ABW77444.1| homeobox protein HoxA3aa [Salmo salar]
Length = 264
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 18 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 73
>gi|32263873|gb|AAG37795.2|AF020962_1 Hox type homeodomain protein [Nematostella vectensis]
Length = 178
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R+R Y++ Q++ELEKEF YL RR+ L+ + LTERQ+K+WFQNRRMKLK+
Sbjct: 46 TKRYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMKLKK 103
>gi|2495322|sp|Q98924.1|HXA9_CHICK RecName: Full=Homeobox protein Hox-A9
gi|1673428|emb|CAA66331.1| Hoxa-9 protein [Gallus gallus]
Length = 169
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 308 HTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
H N N L + R ++ Y+ HQ +ELEKEF YL DRR +++ L LTERQ
Sbjct: 87 HIDPNNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQ 146
Query: 367 IKIWFQNRRMKLKRTHPD 384
+KIWFQNRRMK+K+ + D
Sbjct: 147 VKIWFQNRRMKMKKINKD 164
>gi|392301345|gb|AFM55058.1| ultrabithorax, partial [Rhagovelia obesa]
Length = 249
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 190 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 245
>gi|327263838|ref|XP_003216724.1| PREDICTED: homeobox protein Hox-C6-like [Anolis carolinensis]
Length = 236
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|114666534|ref|XP_001174910.1| PREDICTED: T-cell leukemia homeobox protein 3-like [Pan
troglodytes]
Length = 283
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 181 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 236
>gi|48146025|emb|CAG33235.1| HOXC6 [Homo sapiens]
Length = 235
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|56790313|ref|NP_571196.1| homeobox protein Hox-B9a [Danio rerio]
gi|4322080|gb|AAD15949.1| homeobox protein [Danio rerio]
Length = 255
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 307 SHTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTER 365
S+ N N L + R ++ Y+ +Q +ELEKEF YL DRR +++ L LTER
Sbjct: 173 SYNLGNDPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTER 232
Query: 366 QIKIWFQNRRMKLKRTHPD 384
Q+KIWFQNRRMK+K+ + D
Sbjct: 233 QVKIWFQNRRMKMKKMNKD 251
>gi|390178471|ref|XP_003736654.1| Ubx, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859456|gb|EIM52727.1| Ubx, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 275 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 330
>gi|241756280|ref|XP_002406393.1| homeobox protein, putative [Ixodes scapularis]
gi|215506130|gb|EEC15624.1| homeobox protein, putative [Ixodes scapularis]
Length = 162
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 309 TYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIK 368
TY N N C R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIK
Sbjct: 5 TYKNVRRPN--GCPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIK 62
Query: 369 IWFQNRRMKLKR 380
IWFQNRRMKLK+
Sbjct: 63 IWFQNRRMKLKK 74
>gi|121308926|dbj|BAF43728.1| transcription factor Hox11/13c [Metacrinus rotundus]
Length = 246
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 41/54 (75%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R+ YS QI ELEKEF+L YL DRR LS+ L L+ERQ+KIWFQNRRMK K+
Sbjct: 178 RRPYSKVQIFELEKEFQLHQYLTRDRRARLSQSLTLSERQVKIWFQNRRMKQKK 231
>gi|4760774|dbj|BAA77406.1| PLOX6-Dj [Dugesia japonica]
Length = 218
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 117 RSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKDH 174
>gi|47228655|emb|CAG07387.1| unnamed protein product [Tetraodon nigroviridis]
Length = 467
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 373 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 428
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 38/54 (70%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+
Sbjct: 190 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKK 243
>gi|397911062|gb|AFO68807.1| homeodomain-containing protein Hox4, partial [Branchiostoma
lanceolatum]
Length = 262
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ Q++ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 166 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 221
>gi|395540851|ref|XP_003772364.1| PREDICTED: homeobox protein Hox-C8 [Sarcophilus harrisii]
Length = 242
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|1791005|gb|AAB41222.1| homeodomain-containing transcription factor [Mus musculus]
gi|148695229|gb|EDL27176.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|148695230|gb|EDL27177.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|223460739|gb|AAI39208.1| Hoxd4 protein [Mus musculus]
gi|223461092|gb|AAI39207.1| Hoxd4 protein [Mus musculus]
Length = 250
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 128 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 187
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 188 TLCLSERQIKIWFQNRRMKWKKDH 211
>gi|345316078|ref|XP_001518990.2| PREDICTED: homeobox protein Hox-C6-like, partial [Ornithorhynchus
anatinus]
Length = 260
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 185 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 240
>gi|220898217|gb|ACL81470.1| HoxD8 [Latimeria menadoensis]
Length = 234
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHSLGLTERQIKIWFQNRRMKWKK 198
>gi|123204413|gb|ABM73548.1| homeodomain protein [Megalobrama amblycephala]
Length = 240
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 44/67 (65%)
Query: 312 NQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWF 371
N + L +T + R Y+ HQI+ELEKEF YL DRR + + L LTERQ+KIWF
Sbjct: 174 NPVSNWLHASSTRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVPRLLNLTERQVKIWF 233
Query: 372 QNRRMKL 378
QNRRMKL
Sbjct: 234 QNRRMKL 240
>gi|449492645|ref|XP_004175412.1| PREDICTED: homeobox protein Hox-A10 [Taeniopygia guttata]
Length = 364
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 283 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRR 342
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 343 MKLKKMN 349
>gi|213511741|ref|NP_001133019.1| homeobox protein HoxC8bb [Salmo salar]
gi|157815995|gb|ABV82016.1| homeobox protein HoxC8bb [Salmo salar]
gi|158702357|gb|ABW77545.1| homeobox protein HoxC8bb [Salmo salar]
Length = 264
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|156387514|ref|XP_001634248.1| predicted protein [Nematostella vectensis]
gi|156221329|gb|EDO42185.1| predicted protein [Nematostella vectensis]
Length = 231
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R+R Y++ Q++ELEKEF YL RR+ L+ + LTERQ+K+WFQNRRMKLK+
Sbjct: 99 TKRYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMKLKK 156
>gi|2582183|gb|AAB82458.1| LOX6 [Hirudo medicinalis]
Length = 265
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R YS +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 96 RARTSYSRYQTLELEKEFHFNRYLNGRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 151
>gi|158508520|ref|NP_034599.2| homeobox protein Hox-D4 [Mus musculus]
gi|114152826|sp|P10628.3|HXD4_MOUSE RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-4.2; AltName: Full=Homeobox protein Hox-5.1
gi|74183224|dbj|BAE22547.1| unnamed protein product [Mus musculus]
Length = 250
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 128 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 187
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 188 TLCLSERQIKIWFQNRRMKWKKDH 211
>gi|157786818|ref|NP_001099355.1| homeo box D4 [Rattus norvegicus]
gi|149022292|gb|EDL79186.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
gi|149022293|gb|EDL79187.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 128 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 187
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 188 TLCLSERQIKIWFQNRRMKWKKDH 211
>gi|165873669|gb|ABY67959.1| lox2 hox protein [Capitella teleta]
gi|443711119|gb|ELU05026.1| hypothetical protein CAPTEDRAFT_225442 [Capitella teleta]
Length = 254
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF+ YL RR LS L LTERQIKIWFQNRRMK K+
Sbjct: 172 RGRQTYTRYQTLELEKEFKFNRYLTRRRRIELSHMLCLTERQIKIWFQNRRMKEKKE--- 228
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSA 414
++ +KE +E +KT S P T+
Sbjct: 229 --IQAIKELNEK----EKTKPNSVPNPTTV 252
>gi|194676059|ref|XP_001788285.1| PREDICTED: homeobox protein Hox-B8 [Bos taurus]
Length = 126
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 31 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 86
>gi|38016615|gb|AAR07641.1| transcription factor Hox11/13c [Ptychodera flava]
Length = 268
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS QI ELEKEF+ YL DRR L++ L LTERQ+KIWFQNRRMKLK+
Sbjct: 161 YSKLQIFELEKEFQQNMYLTRDRRTRLAQTLNLTERQVKIWFQNRRMKLKK 211
>gi|38016611|gb|AAR07639.1| transcription factor Hox11/13a [Ptychodera flava]
Length = 231
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R+ Y+ +Q +ELEKEF YL DRR +S+ L LTERQ+KIWFQNRRMKLK+
Sbjct: 155 RKPYTKYQTLELEKEFLYNMYLTRDRRTDISRALNLTERQVKIWFQNRRMKLKK 208
>gi|1574932|gb|AAB09407.1| HEHBOX7, partial [Heliocidaris erythrogramma]
Length = 158
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS QI ELEKEF+ YL DRR LS+ L LTERQ+KIWFQNRRMK+K+
Sbjct: 23 YSKLQIYELEKEFQANMYLTRDRRSKLSQALDLTERQVKIWFQNRRMKMKK 73
>gi|395837223|ref|XP_003791540.1| PREDICTED: homeobox protein Hox-D4 [Otolemur garnettii]
Length = 260
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 285 SSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELE 339
S K P L Q P+ + + ++H N + N TG R R Y+ Q++ELE
Sbjct: 117 SGPKQPPPGTALKQ-----PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELE 171
Query: 340 KEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
KEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 172 KEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 214
>gi|297522138|gb|ADI44338.1| deformed protein [Euperipatoides kanangrensis]
Length = 125
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ HQI+ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 41 RQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDH 98
>gi|253828365|gb|ACT36588.1| Anthox7, partial [Nematostella vectensis]
Length = 176
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R+R Y++ Q++ELEKEF YL RR+ L+ + LTERQ+K+WFQNRRMKLK+
Sbjct: 44 TKRYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMKLKK 101
>gi|255742431|gb|ACU32546.1| homeobox protein HoxA10 [Callorhinchus milii]
Length = 344
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 263 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 322
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 323 MKLKKMN 329
>gi|297466157|ref|XP_869789.3| PREDICTED: homeobox protein Hox-C6 isoform 1 [Bos taurus]
gi|297474426|ref|XP_002687279.1| PREDICTED: homeobox protein Hox-C6 [Bos taurus]
gi|335287898|ref|XP_003355472.1| PREDICTED: homeobox protein Hox-C6-like [Sus scrofa]
gi|338726314|ref|XP_003365298.1| PREDICTED: homeobox protein Hox-C6-like isoform 1 [Equus caballus]
gi|345792344|ref|XP_003433616.1| PREDICTED: homeobox protein Hox-C6 [Canis lupus familiaris]
gi|348581051|ref|XP_003476291.1| PREDICTED: homeobox protein Hox-C6-like [Cavia porcellus]
gi|410964585|ref|XP_003988834.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Felis catus]
gi|281342177|gb|EFB17761.1| hypothetical protein PANDA_012614 [Ailuropoda melanoleuca]
gi|296487930|tpg|DAA30043.1| TPA: homeobox C6 [Bos taurus]
gi|351706134|gb|EHB09053.1| Homeobox protein Hox-C6 [Heterocephalus glaber]
gi|431921605|gb|ELK18957.1| Homeobox protein Hox-C6 [Pteropus alecto]
gi|432112558|gb|ELK35274.1| Homeobox protein Hox-C6 [Myotis davidii]
gi|440900713|gb|ELR51791.1| Homeobox protein Hox-C6 [Bos grunniens mutus]
Length = 235
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|429510510|gb|AFZ94993.1| transcription factor Hox8 [Petromyzon marinus]
Length = 274
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 176 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 231
>gi|444517764|gb|ELV11781.1| Homeobox protein Hox-B3 [Tupaia chinensis]
Length = 233
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 26 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 81
>gi|354490177|ref|XP_003507236.1| PREDICTED: homeobox protein Hox-C6-like [Cricetulus griseus]
gi|344239245|gb|EGV95348.1| Homeobox protein Hox-C6 [Cricetulus griseus]
Length = 235
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|291389286|ref|XP_002711077.1| PREDICTED: homeobox C9-like [Oryctolagus cuniculus]
Length = 463
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 371 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 426
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 187 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 240
>gi|260835441|ref|XP_002612717.1| hypothetical protein BRAFLDRAFT_102176 [Branchiostoma floridae]
gi|229298096|gb|EEN68726.1| hypothetical protein BRAFLDRAFT_102176 [Branchiostoma floridae]
Length = 507
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 233 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKK 288
>gi|126343889|ref|XP_001364878.1| PREDICTED: homeobox protein Hox-C6 [Monodelphis domestica]
gi|395540853|ref|XP_003772365.1| PREDICTED: homeobox protein Hox-C6 [Sarcophilus harrisii]
gi|359754108|gb|AEV59529.1| HOXC6 [Macropus eugenii]
Length = 235
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
>gi|374498889|gb|AEZ53163.1| Hox A10, partial [Taeniopygia guttata]
Length = 274
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 201 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRR 260
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 261 MKLKKMN 267
>gi|327263840|ref|XP_003216725.1| PREDICTED: homeobox protein Hox-C8-like [Anolis carolinensis]
Length = 242
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|74267555|dbj|BAE44276.1| hoxB6b [Oryzias latipes]
gi|83016956|dbj|BAE53481.1| hoxB6b [Oryzias latipes]
Length = 231
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 321 CNTG---RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMK 377
C+ G R RQ Y+ +Q +ELEKEF YL RR +S L LTERQIKIWFQNRRMK
Sbjct: 148 CSAGDGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMK 207
Query: 378 LKR 380
K+
Sbjct: 208 WKK 210
>gi|321475843|gb|EFX86805.1| putative homeotic Fushi-tarazu protein [Daphnia pulex]
Length = 428
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 40/59 (67%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
N R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 282 NPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKAKK 340
>gi|363730032|ref|XP_001235693.2| PREDICTED: homeobox protein Hox-A10 [Gallus gallus]
gi|363730040|ref|XP_003640755.1| PREDICTED: homeobox protein Hox-A10-like [Gallus gallus]
gi|363730264|ref|XP_003640791.1| PREDICTED: homeobox protein Hox-A10-like [Gallus gallus]
Length = 364
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 283 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRR 342
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 343 MKLKKMN 349
>gi|307180545|gb|EFN68507.1| Homeotic protein deformed [Camponotus floridanus]
Length = 529
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 316 RQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHNLVLSERQIKIWFQNRRMKWKK 371
>gi|224170624|ref|XP_002197063.1| PREDICTED: homeobox protein Hox-C10-like [Taeniopygia guttata]
Length = 318
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 237 TWLTARSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSIALTDRQVKIWFQNRR 296
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 297 MKLKKMN 303
>gi|253828363|gb|ACT36587.1| Anthox6a [Nematostella vectensis]
Length = 207
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 280 ASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELE 339
A++ S K I + ++ PPP + +C + + R +YS+ Q+VELE
Sbjct: 37 ATNGESQRKQIYPWMTEFRVKGPPPQTK------------ECTSDKNRTIYSTRQLVELE 84
Query: 340 KEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
KEF YL RR +++ L LTE+Q+KIWFQNRRMK K+
Sbjct: 85 KEFHYNRYLCRPRRIEIAQSLELTEKQVKIWFQNRRMKWKK 125
>gi|220898192|gb|ACL81447.1| HoxB4 [Latimeria menadoensis]
Length = 247
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 297 SQIPKPPPSSSHTYSNQ-------------------IHKNLLQCN-TG----RFRQVYSS 332
S P PPPS S NQ +H N + N TG R R Y+
Sbjct: 100 SVTPSPPPSCSQNSMNQSISSSSSCKEPIVYPWMKKVHVNTVNPNFTGGEPKRSRTAYTR 159
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
Q++ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 160 QQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDH 209
>gi|198415285|ref|XP_002124598.1| PREDICTED: similar to putative homeobox protein Hox6/7 [Ciona
intestinalis]
Length = 148
Score = 72.8 bits (177), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 42/61 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS HQ +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ + D
Sbjct: 76 RGRQTYSRHQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKIWFQNRRMKWKKENKD 135
Query: 385 M 385
+
Sbjct: 136 I 136
>gi|47115878|sp|Q8T940.1|UBX_JUNCO RecName: Full=Homeotic protein ultrabithorax; AltName: Full=JcUbx
gi|18535620|gb|AAL71873.1| ultrabithorax [Junonia coenia]
Length = 253
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 161 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 217
Query: 385 MVVEYVKESSE 395
++ +KE +E
Sbjct: 218 --IQAIKELNE 226
>gi|110555649|emb|CAJ56096.1| fushi tarazu [Glomeris marginata]
Length = 365
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ Q +ELEKEF YL RR ++ L LTERQ+KIWFQNRRMK KR P
Sbjct: 263 RTRQTYTRFQTLELEKEFHSNRYLNRRRRIEIATSLTLTERQVKIWFQNRRMKAKR-EPK 321
Query: 385 MVV 387
MVV
Sbjct: 322 MVV 324
>gi|45382451|ref|NP_990224.1| homeobox protein Hox-C8 [Gallus gallus]
gi|60392437|sp|Q9YH13.1|HXC8_CHICK RecName: Full=Homeobox protein Hox-C8; Short=cHoxc-8
gi|4454161|emb|CAA63888.1| homeobox protein [Gallus gallus]
gi|449266118|gb|EMC77228.1| Homeobox protein Hox-C8 [Columba livia]
Length = 242
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|254212173|gb|ACT65748.1| Hoxa10 [Leucoraja erinacea]
Length = 271
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 190 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 249
Query: 376 MKLKR 380
MKLK+
Sbjct: 250 MKLKK 254
>gi|3445428|emb|CAA07498.1| homeobox protein [Cupiennius salei]
Length = 263
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 292 SNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSD 351
S+ S+ P P +SN ++ + R R Y+ HQI+ELEKEF YL
Sbjct: 103 SDCSGSEPPVIYPWMKKVHSNPVNGSFPGIEPKRQRTAYTRHQILELEKEFHFNRYLTRR 162
Query: 352 RRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 163 RRIEIAHALCLSERQIKIWFQNRRMKWKK 191
>gi|350405524|ref|XP_003487462.1| PREDICTED: hypothetical protein LOC100747520 [Bombus impatiens]
Length = 422
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ Q +ELEKEF YL RR +SK L LTERQIKIWFQNRRMK K+
Sbjct: 263 RTRQTYTRFQTLELEKEFHYNRYLTRRRRIEISKALSLTERQIKIWFQNRRMKAKK 318
>gi|125489402|gb|ABN42910.1| homeodomain transcription factor Hox3 [Folsomia candida]
gi|125489404|gb|ABN42911.1| homeodomain transcription factor Hox3 [Folsomia candida]
Length = 534
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 165 TKRARTAYTSAQLVELEKEFHYNRYLCRPRRIEMASLLSLTERQIKIWFQNRRMKYKK 222
>gi|397911064|gb|AFO68808.1| homeodomain-containing protein Hox4, partial [Branchiostoma
lanceolatum]
Length = 118
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+T R R Y+ Q++ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 13 DTKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 71
>gi|18150505|gb|AAL61642.1|AF434666_1 Hox4w [Petromyzon marinus]
Length = 271
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R R Y+ Q++ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 187 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDHKL 246
Query: 383 PDMVVEY-VKESSEARSASQKTNH 405
P+ V+ S+ A SQ +H
Sbjct: 247 PNTKVKLNTASSTPANPVSQGASH 270
>gi|225581123|gb|ACN94694.1| GA10340 [Drosophila miranda]
Length = 270
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 42/56 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R +SSHQ++ELE+EF L Y+ RR +S+ L LTERQ+KIWFQNRRMK K+
Sbjct: 45 RSRTAFSSHQLLELEREFHLNKYMSRTRRIEISQRLNLTERQVKIWFQNRRMKSKK 100
>gi|62526081|dbj|BAD95557.1| Hoxc-8 [Pelodiscus sinensis]
Length = 198
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 133 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 186
>gi|347972379|ref|XP_003436887.1| AGAP004662-PC [Anopheles gambiae str. PEST]
gi|333467597|gb|EGK96615.1| AGAP004662-PC [Anopheles gambiae str. PEST]
Length = 307
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 135 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 194
>gi|332692523|gb|AEE90199.1| Homeobox C6b [Anguilla anguilla]
gi|385654516|gb|AFI62012.1| Hox-C6b [Anguilla japonica]
Length = 233
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 142 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 197
>gi|313240264|emb|CBY32609.1| unnamed protein product [Oikopleura dioica]
Length = 194
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 278 LGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVE 337
LG+ DS + D +L + P +S Q ++ + R R Y+ HQ +E
Sbjct: 87 LGSCDSREKKSDDAKSLKIY------PWMRRMHSAQQNQQRPGNDNKRIRTAYTRHQTLE 140
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 141 LEKEFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKEH 185
>gi|432902029|ref|XP_004076999.1| PREDICTED: homeobox protein Hox-D9b-like [Oryzias latipes]
Length = 218
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 302 PPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELG 361
PPP + ++ IH +T + R Y+ HQ +ELEKEF YL DRR ++ L
Sbjct: 133 PPPDPENPSASWIHAK----STRKKRCPYTKHQTLELEKEFLYNMYLTRDRRLEVAGLLN 188
Query: 362 LTERQIKIWFQNRRMKLKR 380
LTERQ+KIWFQNRRMK+K+
Sbjct: 189 LTERQVKIWFQNRRMKMKK 207
>gi|158290042|ref|XP_311627.4| AGAP004662-PA [Anopheles gambiae str. PEST]
gi|74764409|sp|O76762.1|ABDA_ANOGA RecName: Full=Homeobox protein abdominal-A homolog
gi|3420838|gb|AAC31946.1| abdominal-A homeotic protein [Anopheles gambiae]
gi|157018341|gb|EAA07261.6| AGAP004662-PA [Anopheles gambiae str. PEST]
Length = 308
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 136 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 195
>gi|344252756|gb|EGW08860.1| Homeobox protein Hox-A10 [Cricetulus griseus]
Length = 117
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Query: 292 SNLDLSQIPKPPPSSSHTYSN---QIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNY 347
++L L+Q P P S SN + N L +GR ++ Y+ HQ +ELEKEF Y
Sbjct: 10 TSLALAQAP--PDSGDEDTSNSKGENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMY 67
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
L +RR +S+ + LT+RQ+KIWFQNRRMKLK+
Sbjct: 68 LTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK 100
>gi|285206887|gb|ADC35175.1| deformed [Nezara viridula]
Length = 148
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ +
Sbjct: 2 RQRTAYTRHQILELEKEFHYNKYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDNNL 61
Query: 383 PDMVVEYVKESSEARSASQK---------TNHQSAPADTSAPNTHMKSFEEFIREHYERS 433
P+ K +AS+K + Q P D H+ E+ +
Sbjct: 62 PNTKNVRRKNGQGGATASKKPSRSRVPDASRQQRRPTDGLEEMPHLHDLHEYPPPNLAVL 121
Query: 434 AVPFPASQPGEHPLATGELHGSPLEMQT 461
+ QP H A G +H PL ++T
Sbjct: 122 SQQLTPLQPSMH-AACGPIHQPPLPVKT 148
>gi|326921919|ref|XP_003207201.1| PREDICTED: homeobox protein Hox-A9-like [Meleagris gallopavo]
Length = 122
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 63 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 117
>gi|14916598|sp|Q9IA26.1|HXA9_HETFR RecName: Full=Homeobox protein Hox-A9
gi|7271835|gb|AAF44646.1|AF224262_8 HoxA9 [Heterodontus francisci]
Length = 260
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 308 HTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
H N N L + R ++ Y+ HQ +ELEKEF YL DRR +++ L LTERQ
Sbjct: 177 HMDPNNPSANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQ 236
Query: 367 IKIWFQNRRMKLKR 380
+KIWFQNRRMK+K+
Sbjct: 237 VKIWFQNRRMKMKK 250
>gi|53733782|gb|AAH83307.1| Hoxc6a protein [Danio rerio]
gi|197247195|gb|AAI65049.1| Hoxc6a protein [Danio rerio]
Length = 223
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 121 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 176
>gi|86515384|ref|NP_001034518.1| homeobox protein abdominal-A homolog [Tribolium castaneum]
gi|6016229|sp|Q07961.2|ABDA_TRICA RecName: Full=Homeobox protein abdominal-A homolog
gi|2394295|gb|AAB70262.1| abdominal-AII [Tribolium castaneum]
gi|270002801|gb|EEZ99248.1| abdominal-A [Tribolium castaneum]
Length = 343
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 214 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 273
>gi|254212174|gb|ACT65749.1| Hoxa9 [Leucoraja erinacea]
Length = 260
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 308 HTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
H N N L + R ++ Y+ HQ +ELEKEF YL DRR +++ L LTERQ
Sbjct: 177 HMDPNNPSANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQ 236
Query: 367 IKIWFQNRRMKLKR 380
+KIWFQNRRMK+K+
Sbjct: 237 VKIWFQNRRMKMKK 250
>gi|154183815|gb|ABS70756.1| Hoxc10a [Haplochromis burtoni]
Length = 330
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
+ L+ +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 249 SWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLEISRSINLTDRQVKIWFQNRR 308
Query: 376 MKLKR 380
MKLK+
Sbjct: 309 MKLKK 313
>gi|348521436|ref|XP_003448232.1| PREDICTED: homeobox protein Hox-C10a-like [Oreochromis niloticus]
Length = 331
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
+ L+ +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 250 SWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLEISRSINLTDRQVKIWFQNRR 309
Query: 376 MKLKR 380
MKLK+
Sbjct: 310 MKLKK 314
>gi|14531038|gb|AAK63185.1| transcription factor Cnox4-Pc [Podocoryna carnea]
Length = 356
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ Q+ ELE EFR + +L DRR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 215 RKRTAYTRKQLTELELEFRCSQFLTRDRRMEMAAILGLTERQIKIWFQNRRMKFKK 270
>gi|18307794|gb|AAL67686.1|AF435787_1 ultrabithorax [Artemia franciscana]
Length = 279
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 184 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE--- 240
Query: 385 MVVEYVKESSE 395
++ +KE +E
Sbjct: 241 --IQAIKELNE 249
>gi|154183795|gb|ABS70738.1| Hoxb9a [Haplochromis burtoni]
Length = 283
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L + R ++ Y+ +Q +ELEKEF YL DRR +++ L LTERQ+KIWFQNRR
Sbjct: 211 NWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQVKIWFQNRR 270
Query: 376 MKLKRTHPD 384
MK+K+ + D
Sbjct: 271 MKMKKQNKD 279
>gi|109944940|dbj|BAE96998.1| Ultrabithorax [Artemia franciscana]
gi|109944943|dbj|BAE97000.1| Ultrabithorax [Artemia franciscana]
Length = 280
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 185 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE--- 241
Query: 385 MVVEYVKESSE 395
++ +KE +E
Sbjct: 242 --IQAIKELNE 250
>gi|119370784|sp|Q1KKX7.1|HXB3A_FUGRU RecName: Full=Homeobox protein Hox-B3a
gi|94482799|gb|ABF22417.1| homeobox protein HoxB3a [Takifugu rubripes]
Length = 474
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 214 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 269
>gi|432871365|ref|XP_004071929.1| PREDICTED: homeobox protein Hox-B9a [Oryzias latipes]
gi|74267545|dbj|BAE44271.1| hoxB9a [Oryzias latipes]
gi|83016951|dbj|BAE53478.1| hoxB9a [Oryzias latipes]
Length = 282
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L + R ++ Y+ +Q +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 205 NDPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQVKIW 264
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ D
Sbjct: 265 FQNRRMKMKKQSKD 278
>gi|410901717|ref|XP_003964342.1| PREDICTED: homeobox protein Hox-B4a-like [Takifugu rubripes]
Length = 297
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 308 HTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGL 362
+ + ++H N++ N TG R R Y+ Q++ELEKEF YL RR ++ L L
Sbjct: 173 YPWMKKVHVNIVSSNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCL 232
Query: 363 TERQIKIWFQNRRMKLKRTH 382
+ERQIKIWFQNRRMK K+ H
Sbjct: 233 SERQIKIWFQNRRMKWKKDH 252
>gi|332692520|gb|AEE90196.1| Homeobox C10b [Anguilla anguilla]
Length = 339
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ +Q +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 258 NWLTAKSGRKKRCPYTKYQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 317
Query: 376 MKLKR 380
MKLK+
Sbjct: 318 MKLKK 322
>gi|256090472|ref|XP_002581213.1| SmHox8 (fragment) [Schistosoma mansoni]
Length = 184
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF+ ++YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 9 RGRQTYSRYQTLELEKEFQYSHYLTRRRRIEIAHNLCLTERQIKIWFQNRRMKLKK 64
>gi|432107306|gb|ELK32720.1| Homeobox protein Hox-D3 [Myotis davidii]
Length = 454
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 195 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 250
>gi|262263017|gb|ACY39977.1| HoxD4 [Heterodontus francisci]
Length = 238
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + +IH N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 121 PAVVYPWMKKIHVNTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 180
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 181 TLCLSERQIKIWFQNRRMKWKKDH 204
>gi|166429526|ref|NP_001107632.1| ultrabithorax [Bombyx mori]
gi|164682496|gb|ABY66345.1| homeobox protein [Bombyx mori]
gi|284924982|dbj|BAI67747.1| Ultrabithorax [Bombyx mori]
Length = 254
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 162 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 218
Query: 385 MVVEYVKESSE 395
++ +KE +E
Sbjct: 219 --IQAIKELNE 227
>gi|164682494|gb|ABY66344.1| homeobox protein [Bombyx mori]
Length = 254
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 162 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 218
Query: 385 MVVEYVKESSE 395
++ +KE +E
Sbjct: 219 --IQAIKELNE 227
>gi|2394296|gb|AAB70263.1| abdominal-A [Tribolium castaneum]
Length = 284
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 155 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 214
>gi|387862364|gb|AFK08968.1| ultrabithorax variant a, partial [Bicyclus anynana]
Length = 234
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 160 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 215
>gi|328778410|ref|XP_001120045.2| PREDICTED: hypothetical protein LOC724252 [Apis mellifera]
Length = 565
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 330 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 385
>gi|26348301|dbj|BAC37790.1| unnamed protein product [Mus musculus]
Length = 185
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 96 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 149
>gi|2495331|sp|Q05007.1|ABDA_ARTSF RecName: Full=Homeobox protein abdominal-A homolog
gi|11098|emb|CAA49681.1| adbA [Artemia franciscana]
Length = 139
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 42/60 (70%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 4 CPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 63
>gi|71896405|ref|NP_001025517.1| homeobox protein Hox-A4 [Gallus gallus]
gi|363730020|ref|XP_003640746.1| PREDICTED: homeobox protein Hox-A4-like [Gallus gallus]
gi|123228|sp|P17277.1|HXA4_CHICK RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; Short=Chox-1.4
gi|63219|emb|CAA36896.1| unnamed protein product [Gallus gallus]
Length = 309
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 308 HTYSNQIHKNLLQCNTG-----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGL 362
+ + +IH + + N R R Y+ Q++ELEKEF YL RR ++ L L
Sbjct: 189 YPWMKKIHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCL 248
Query: 363 TERQIKIWFQNRRMKLKRTH--PDMVVEYVKESSEA-RSASQKTNHQSAPADTSAPNT 417
+ERQ+KIWFQNRRMK K+ H P+ + + S + A +T P D +APN
Sbjct: 249 SERQVKIWFQNRRMKWKKDHKLPNTKMRSSNQPSLGQQQAKAQTQGHPRPLDGAAPNA 306
>gi|301128872|emb|CBL59336.1| HoxA9 [Scyliorhinus canicula]
Length = 260
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 308 HTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
H N N L + R ++ Y+ HQ +ELEKEF YL DRR +++ L LTERQ
Sbjct: 177 HMDPNNPSANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQ 236
Query: 367 IKIWFQNRRMKLKR 380
+KIWFQNRRMK+K+
Sbjct: 237 VKIWFQNRRMKMKK 250
>gi|291500845|gb|ADE08353.1| homeobox C6 [Monodelphis domestica]
Length = 208
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 116 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 171
>gi|345313862|ref|XP_001520107.2| PREDICTED: homeobox protein Hox-C8-like, partial [Ornithorhynchus
anatinus]
Length = 196
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 107 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 160
>gi|259053113|emb|CAX11343.1| abdominal A [Parasteatoda tepidariorum]
Length = 250
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 125 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 184
>gi|431894935|gb|ELK04728.1| Homeobox protein Hox-D4 [Pteropus alecto]
Length = 253
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 128 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 187
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 188 TLCLSERQIKIWFQNRRMKWKKDH 211
>gi|172087274|ref|XP_001913179.1| Hox10 [Oikopleura dioica]
gi|48994287|gb|AAT47861.1| Hox10 [Oikopleura dioica]
gi|313230051|emb|CBY07755.1| unnamed protein product [Oikopleura dioica]
gi|313245905|emb|CBY34887.1| unnamed protein product [Oikopleura dioica]
Length = 312
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 316 KNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
+N L + R Y+ Q++ELEKEF YL +RR ++K +GLT+RQ+KIWFQNRR
Sbjct: 180 RNWLTAQGRKKRVPYTKFQLLELEKEFHFNQYLSRERRLEVAKNVGLTDRQVKIWFQNRR 239
Query: 376 MKLKR 380
MK K+
Sbjct: 240 MKWKK 244
>gi|229259774|gb|ACQ45695.1| Hoxc8 [Ovis aries]
Length = 90
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 40/55 (72%)
Query: 326 FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
FRQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 1 FRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 55
>gi|222478316|gb|ACM62735.1| Hox9-14C homeodomain transcription factor protein [Clytia
hemisphaerica]
Length = 335
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
+T R R YS Q++ELEKEF + +L +RR L+K+L LTERQIKIWFQNRRM
Sbjct: 206 IDTKRKRMTYSRKQLLELEKEFHFSQFLKKERRSDLAKQLSLTERQIKIWFQNRRM 261
>gi|195344079|ref|XP_002038616.1| GM10524 [Drosophila sechellia]
gi|194133637|gb|EDW55153.1| GM10524 [Drosophila sechellia]
Length = 525
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 323 GGGESDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTR 382
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 383 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 432
>gi|17136422|ref|NP_476693.1| abdominal A, isoform A [Drosophila melanogaster]
gi|281361946|ref|NP_001163632.1| abdominal A, isoform C [Drosophila melanogaster]
gi|386765930|ref|NP_001247145.1| abdominal A, isoform D [Drosophila melanogaster]
gi|7523|emb|CAA38321.1| homeobox protein [Drosophila melanogaster]
gi|969084|gb|AAA84406.1| ABD-AI [Drosophila melanogaster]
gi|7300194|gb|AAF55359.1| abdominal A, isoform A [Drosophila melanogaster]
gi|54650674|gb|AAV36916.1| RE04174p [Drosophila melanogaster]
gi|220953476|gb|ACL89281.1| abd-A-PA [synthetic construct]
gi|272477023|gb|ACZ94928.1| abdominal A, isoform C [Drosophila melanogaster]
gi|383292756|gb|AFH06463.1| abdominal A, isoform D [Drosophila melanogaster]
Length = 330
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 136 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 195
>gi|109944946|dbj|BAE97002.1| Ultrabithorax [Porcellio scaber]
Length = 248
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 134 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 190
Query: 385 MVVEYVKESSE 395
++ +KE +E
Sbjct: 191 --IQAIKELNE 199
>gi|21389049|gb|AAM50459.1|AF393443_1 antennapedia [Sacculina carcini]
Length = 369
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 290 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 345
>gi|59939334|gb|AAX12426.1| Dbuz\abd-A-PA [Drosophila buzzatii]
Length = 331
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 134 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 193
>gi|14916602|sp|Q9PWD4.1|HXA7_MORSA RecName: Full=Homeobox protein Hox-A7
gi|5669603|gb|AAD46397.1|AF089743_3 homeodomain protein Hox-A7 [Morone saxatilis]
Length = 225
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ YS +Q +ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 128 RGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDH 185
>gi|390351579|ref|XP_783216.2| PREDICTED: homeobox protein abdominal-A homolog [Strongylocentrotus
purpuratus]
Length = 156
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
R+ Y+ Q ELEKEF YL DRR +S+ L LTERQ+KIWFQNRRMKLK+
Sbjct: 13 RKPYTKFQTFELEKEFLYNMYLTRDRRSHISRALSLTERQVKIWFQNRRMKLKKM----- 67
Query: 387 VEYVKESSEARSASQKTNHQSAPAD 411
AR +++ NH PA
Sbjct: 68 --------RAREENERKNHSHHPAG 84
>gi|385654536|gb|AFI62029.1| Hox-D10b [Anguilla japonica]
Length = 333
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
+ L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 252 SWLTTKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 311
Query: 376 MKLKR 380
MKLK+
Sbjct: 312 MKLKK 316
>gi|301128871|emb|CBL59335.1| HoxA10 [Scyliorhinus canicula]
Length = 271
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 190 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 249
Query: 376 MKLKR 380
MKLK+
Sbjct: 250 MKLKK 254
>gi|1333934|emb|CAA31022.1| unnamed protein product [Mus musculus]
Length = 221
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 129 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 184
>gi|21389047|gb|AAM50458.1|AF393442_1 ultrabithorax [Sacculina carcini]
Length = 134
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 10/84 (11%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ +L LTERQIKIWFQNRRMKLK+
Sbjct: 1 RGRQTYTRYQTLELEKEFHANHYLTRRRRIEMAHQLCLTERQIKIWFQNRRMKLKKE--- 57
Query: 385 MVVEYVKESSEARSASQKTNHQSA 408
++ +KE +E Q+ NH+ A
Sbjct: 58 --IQAIKELNE-----QENNHRPA 74
>gi|34484444|gb|AAQ72844.1| HoxB6b [Sphoeroides nephelus]
Length = 233
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 322 NTGR-FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
N+GR RQ Y+ +Q +ELEKEF YL RR +S L LTERQIKIWFQNRRMK K+
Sbjct: 153 NSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKK 212
>gi|26348375|dbj|BAC37827.1| unnamed protein product [Mus musculus]
Length = 176
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 87 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 140
>gi|147905770|ref|NP_001083728.1| homeobox protein pXhoxc8 [Xenopus laevis]
gi|2459821|gb|AAB71818.1| homeobox protein pXhoxc8 [Xenopus laevis]
Length = 256
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 167 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQLKIWFQNRRMKWKK 220
>gi|431909017|gb|ELK12608.1| Homeobox protein Hox-A9 [Pteropus alecto]
Length = 90
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 31 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 85
>gi|47229433|emb|CAF99421.1| unnamed protein product [Tetraodon nigroviridis]
Length = 850
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 354 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 409
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 326 FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R Y++ Q++ELEKEF YL RR ++ L LTERQ+K+WFQNRRMK KR
Sbjct: 627 LRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR 681
>gi|348517811|ref|XP_003446426.1| PREDICTED: homeobox protein Hox-B9a-like [Oreochromis niloticus]
Length = 283
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L + R ++ Y+ +Q +ELEKEF YL DRR +++ L LTERQ+KIWFQNRR
Sbjct: 211 NWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQVKIWFQNRR 270
Query: 376 MKLKRTHPD 384
MK+K+ + D
Sbjct: 271 MKMKKQNKD 279
>gi|220898183|gb|ACL81439.1| HoxA7 [Latimeria menadoensis]
Length = 212
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 133 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 190
>gi|158702310|gb|ABW77506.1| homeobox protein HoxB6bb [Salmo salar]
Length = 232
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 321 CNTGRF-------RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQN 373
C G F RQ Y+ +Q +ELEKEF YL RR +S L LTERQIKIWFQN
Sbjct: 140 CTAGTFGSSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQN 199
Query: 374 RRMKLKRTHPDM 385
RRMK K+ + M
Sbjct: 200 RRMKWKKENKVM 211
>gi|213511400|ref|NP_001133043.1| homeobox protein Hox-A10b [Salmo salar]
gi|158702254|gb|ABW77458.1| homeobox protein HoxA10b [Salmo salar]
Length = 339
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
+++ N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 251 TSETKANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKI 310
Query: 370 WFQNRRMKLKR 380
WFQNRRMKLK+
Sbjct: 311 WFQNRRMKLKK 321
>gi|223635191|sp|A8DT10.1|HXD3_HAPBU RecName: Full=Homeobox protein Hox-D3
gi|154183858|gb|ABS70796.1| Hoxd3a [Haplochromis burtoni]
Length = 404
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R + Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 171 RVKTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 226
>gi|410901719|ref|XP_003964343.1| PREDICTED: homeobox protein Hox-B3a-like [Takifugu rubripes]
gi|45772175|tpg|DAA05217.1| TPA_exp: Hoxb3a [Takifugu rubripes]
Length = 477
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 217 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 272
>gi|11108|emb|CAA49686.1| Ubx [Artemia franciscana]
Length = 107
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 7 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKK--EI 64
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSF 422
++ + E + + S+ ++ S+P MKSF
Sbjct: 65 QAIKELNEQDKRITPSKLHSNCSSPTGILVTMKKMKSF 102
>gi|1574930|gb|AAB09406.1| HEHBOX9, partial [Heliocidaris erythrogramma]
Length = 90
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+ H
Sbjct: 4 RSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKEH 61
>gi|66793386|ref|NP_571192.2| homeobox protein Hox-B3a [Danio rerio]
gi|66267386|gb|AAH95559.1| Homeo box B3a [Danio rerio]
Length = 417
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 182 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 237
>gi|60392404|sp|O42368.3|HXB3A_DANRE RecName: Full=Homeobox protein Hox-B3a; Short=Hox-B3
gi|26984639|emb|CAD59116.1| SI:dZ254O17.6 (homeo box protein B3a) [Danio rerio]
gi|27817786|emb|CAD61096.1| Hoxb3a protein [Danio rerio]
gi|45772167|tpg|DAA05213.1| TPA_exp: Hoxb3a variant 1 [Danio rerio]
gi|45772169|tpg|DAA05214.1| TPA_exp: Hoxb3a variant 2 [Danio rerio]
Length = 417
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 182 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 237
>gi|255742456|gb|ACU32569.1| homeobox protein HoxC10 [Callorhinchus milii]
Length = 357
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 318 LLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRM 376
L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRRM
Sbjct: 277 WLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRM 336
Query: 377 KLKR 380
KLK+
Sbjct: 337 KLKK 340
>gi|195498914|ref|XP_002096729.1| GE25827 [Drosophila yakuba]
gi|194182830|gb|EDW96441.1| GE25827 [Drosophila yakuba]
Length = 419
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 276 GGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTR 335
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 336 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 385
>gi|24644694|ref|NP_524248.2| Sex combs reduced, isoform A [Drosophila melanogaster]
gi|45553277|ref|NP_996165.1| Sex combs reduced, isoform B [Drosophila melanogaster]
gi|68067436|sp|P09077.5|SCR_DROME RecName: Full=Homeotic protein Sex combs reduced
gi|4389425|gb|AAD19795.1| homeodomain protein [Drosophila melanogaster]
gi|7298875|gb|AAF54082.1| Sex combs reduced, isoform A [Drosophila melanogaster]
gi|45446383|gb|AAS65103.1| Sex combs reduced, isoform B [Drosophila melanogaster]
Length = 417
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 274 GGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTR 333
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 334 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
>gi|118343697|ref|NP_001071669.1| transcription factor protein [Ciona intestinalis]
gi|70569082|dbj|BAE06346.1| transcription factor protein [Ciona intestinalis]
Length = 394
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 14/108 (12%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
++R VYS HQ +ELEKEFR + Y+ R+ L+ L L+ERQIKIWFQNRR K ++
Sbjct: 217 KYRVVYSDHQRLELEKEFRFSRYITIRRKAELAGLLCLSERQIKIWFQNRRAKERKA--- 273
Query: 385 MVVEYVKESSEARSASQKTNHQSAPAD------TSAPNTHMKSFEEFI 426
K++ E K ++A D TS+P HM+S ++I
Sbjct: 274 -----TKKTGEPSKDFDKDEAEAADDDVTDHPMTSSPIQHMQSGCQYI 316
>gi|332692539|gb|AEE90213.1| Homeobox D10b [Anguilla anguilla]
Length = 333
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
+ L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 252 SWLTTKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 311
Query: 376 MKLKR 380
MKLK+
Sbjct: 312 MKLKK 316
>gi|255742475|gb|ACU32587.1| homeobox protein HoxD8 [Callorhinchus milii]
Length = 239
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 149 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 204
>gi|195568828|ref|XP_002102414.1| GD19518 [Drosophila simulans]
gi|194198341|gb|EDX11917.1| GD19518 [Drosophila simulans]
Length = 463
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 320 GGGESDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTR 379
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 380 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 429
>gi|432865296|ref|XP_004070513.1| PREDICTED: homeobox protein Hox-C10a-like isoform 1 [Oryzias
latipes]
gi|74267569|dbj|BAE44283.1| hoxC10a [Oryzias latipes]
gi|83016968|dbj|BAE53491.1| hoxC10a [Oryzias latipes]
Length = 324
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
+ L+ +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 243 SWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLEISRSINLTDRQVKIWFQNRR 302
Query: 376 MKLKR 380
MKLK+
Sbjct: 303 MKLKK 307
>gi|14916587|sp|Q9IA14.1|HXD10_HETFR RecName: Full=Homeobox protein Hox-D10
gi|7271822|gb|AAF44634.1|AF224263_4 HoxD10 [Heterodontus francisci]
Length = 336
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ +Q +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 255 NWLTAKSGRKKRCPYTKYQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 314
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 315 MKLKKMN 321
>gi|158702264|gb|ABW77463.1| homeobox protein HoxB9aa [Salmo salar]
Length = 249
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L + R ++ Y+ +Q +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 172 NDPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARSLNLTERQVKIW 231
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 232 FQNRRMKMKKMNKD 245
>gi|332692477|gb|AEE90158.1| Homeobox A10b [Anguilla anguilla]
gi|385654468|gb|AFI61970.1| Hox-A10b [Anguilla japonica]
Length = 353
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 272 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 331
Query: 376 MKLKR 380
MKLK+
Sbjct: 332 MKLKK 336
>gi|195947352|ref|NP_001124327.1| homeobox protein HoxA10ab [Salmo salar]
gi|157816057|gb|ABV82047.1| homeobox protein HoxA10ab [Salmo salar]
gi|158702236|gb|ABW77449.1| homeobox protein HoxA10ab [Salmo salar]
Length = 293
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 212 NWLTAKSGRKKRCPYTKHQTLELEKEFLYNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 271
Query: 376 MKLKR 380
MKLK+
Sbjct: 272 MKLKK 276
>gi|74267535|dbj|BAE44266.1| hoxB3a [Oryzias latipes]
gi|83016946|dbj|BAE53473.1| hoxB3a [Oryzias latipes]
Length = 472
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 209 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 264
>gi|340727743|ref|XP_003402196.1| PREDICTED: hypothetical protein LOC100642982 [Bombus terrestris]
Length = 543
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 327 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 382
>gi|220898204|gb|ACL81458.1| HoxC3 [Latimeria menadoensis]
Length = 391
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R R Y++ Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 165 RARTAYTNAQLVELEKEFHFNRYLCRPRRVEMANILNLSERQIKIWFQNRRMKYKKDH 222
>gi|28629647|gb|AAO43029.1| HoxB4 [Latimeria menadoensis]
Length = 244
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 63/144 (43%), Gaps = 23/144 (15%)
Query: 297 SQIPKPPPSSSHTYSNQIHKNLLQCN-----------------TG----RFRQVYSSHQI 335
S P PPPS S NQ + C TG R R Y+ Q+
Sbjct: 100 SVTPSPPPSCSQNSMNQSISSSSSCKEPIVYPWMKKVHVNPNFTGGEPKRSRTAYTRQQV 159
Query: 336 VELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH--PDMVVEYVKES 393
+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H P+ +
Sbjct: 160 LELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNPIV 219
Query: 394 SEARSASQKTNHQSAPADTSAPNT 417
S S Q+ S P P +
Sbjct: 220 SSNCSGGQQLQGVSQPRTNGPPTS 243
>gi|387915092|gb|AFK11155.1| homeobox protein HoxD8 [Callorhinchus milii]
Length = 238
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>gi|297486962|ref|XP_002695988.1| PREDICTED: homeobox protein Hox-B8, partial [Bos taurus]
gi|296476559|tpg|DAA18674.1| TPA: homeobox B8-like [Bos taurus]
Length = 102
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 7 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 62
>gi|157816075|gb|ABV82056.1| homeobox protein HoxA10b [Salmo salar]
Length = 339
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 311 SNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKI 369
+++ N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KI
Sbjct: 251 TSETKANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKI 310
Query: 370 WFQNRRMKLKR 380
WFQNRRMKLK+
Sbjct: 311 WFQNRRMKLKK 321
>gi|34810086|pdb|1PUF|A Chain A, Crystal Structure Of Hoxa9 And Pbx1 Homeodomains Bound To
Dna
Length = 77
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 20 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 74
>gi|798833|emb|CAA54348.1| unnamed protein product [Drosophila melanogaster]
Length = 417
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 274 GGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTR 333
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 334 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 383
>gi|387231161|gb|AFJ72291.1| homeobox A9, partial [Rhinolophus macrotis]
gi|387231163|gb|AFJ72292.1| homeobox A9, partial [Hipposideros armiger]
gi|387231165|gb|AFJ72293.1| homeobox A9, partial [Rhinolophus paradoxolophus]
gi|387231167|gb|AFJ72294.1| homeobox A9, partial [Rhinolophus rex]
gi|387231169|gb|AFJ72295.1| homeobox A9, partial [Taphozous melanopogon]
gi|387231173|gb|AFJ72297.1| homeobox A9, partial [Aselliscus stoliczkanus]
gi|387231175|gb|AFJ72298.1| homeobox A9, partial [Rhinolophus pusillus]
gi|387231177|gb|AFJ72299.1| homeobox A9, partial [Hipposideros pomona]
gi|387231179|gb|AFJ72300.1| homeobox A9, partial [Rhinolophus sinicus]
gi|387231181|gb|AFJ72301.1| homeobox A9, partial [Rhinolophus affinis]
gi|387231183|gb|AFJ72302.1| homeobox A9, partial [Hipposideros larvatus]
Length = 78
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 19 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 73
>gi|66347927|ref|NP_571230.1| homeobox protein Hox-A10b [Danio rerio]
gi|60392410|sp|Q8AWY2.1|HXAAB_DANRE RecName: Full=Homeobox protein Hox-A10b; Short=Hox-A10
gi|26984645|emb|CAD59110.1| homeo box protein A10b [Danio rerio]
gi|190336905|gb|AAI62345.1| Homeo box A10b [Danio rerio]
Length = 330
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 249 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 308
Query: 376 MKLKR 380
MKLK+
Sbjct: 309 MKLKK 313
>gi|332692490|gb|AEE90170.1| Homeobox B4a [Anguilla anguilla]
Length = 243
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 308 HTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGL 362
+ + ++H N++ N TG R R Y+ Q++ELEKEF YL RR ++ L L
Sbjct: 127 YPWMKKVHVNIVNPNYTGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCL 186
Query: 363 TERQIKIWFQNRRMKLKRTH 382
+ERQIKIWFQNRRMK K+ H
Sbjct: 187 SERQIKIWFQNRRMKWKKDH 206
>gi|301128902|emb|CBL59364.1| HoxD4 [Scyliorhinus canicula]
Length = 240
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 123 PAVVYPWMKKVHVNTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 182
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 183 TLCLSERQIKIWFQNRRMKWKKDH 206
>gi|426432569|gb|ADO33070.2| ultrabithorax [Biston betularia]
Length = 254
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 162 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 218
Query: 385 MVVEYVKESSE 395
++ +KE +E
Sbjct: 219 --IQAIKELNE 227
>gi|1644431|gb|AAB17576.1| homeodomain protein, partial [Polycelis nigra]
Length = 107
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS HQ +ELEKEF+ +YL RR ++ L L+ERQIKIWFQNRRMKLK+
Sbjct: 8 RGRQTYSRHQTLELEKEFQFNHYLTRRRRIEIAHNLCLSERQIKIWFQNRRMKLKK 63
>gi|255742443|gb|ACU32557.1| homeobox protein HoxB3 [Callorhinchus milii]
Length = 394
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 156 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 211
>gi|195349282|ref|XP_002041174.1| GM15411 [Drosophila sechellia]
gi|194122779|gb|EDW44822.1| GM15411 [Drosophila sechellia]
Length = 201
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 321 CNTG---RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMK 377
C G R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMK
Sbjct: 102 CTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMK 161
Query: 378 LKR 380
LK+
Sbjct: 162 LKK 164
>gi|213514632|ref|NP_001135098.1| homeobox protein HoxB9ab [Salmo salar]
gi|157816101|gb|ABV82069.1| homeobox protein HoxB9ab [Salmo salar]
gi|158702276|gb|ABW77474.1| homeobox protein HoxB9ab [Salmo salar]
Length = 249
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L + R ++ Y+ +Q +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 172 NDPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARSLNLTERQVKIW 231
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + D
Sbjct: 232 FQNRRMKMKKMNKD 245
>gi|350405520|ref|XP_003487460.1| PREDICTED: hypothetical protein LOC100747283 [Bombus impatiens]
Length = 543
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 327 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 382
>gi|348533880|ref|XP_003454432.1| PREDICTED: homeobox protein Hox-A10b-like [Oreochromis niloticus]
Length = 349
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 268 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 327
Query: 376 MKLKR 380
MKLK+
Sbjct: 328 MKLKK 332
>gi|299473905|gb|ADJ18235.1| Lox5 protein [Gibbula varia]
Length = 200
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR---- 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 16 RTRQTYTRYQTLELEKEFHFNRYLTRRRRIEVAHMLGLTERQIKIWFQNRRMKWKKDNNV 75
Query: 381 ---THPDMVVE 388
T PD V+
Sbjct: 76 SKVTGPDKCVQ 86
>gi|410895279|ref|XP_003961127.1| PREDICTED: homeobox protein Hox-B6b-like [Takifugu rubripes]
gi|119370788|sp|Q1KKX1.1|HXB6B_FUGRU RecName: Full=Homeobox protein Hox-B6b
gi|94482806|gb|ABF22423.1| homeobox protein HoxB6b [Takifugu rubripes]
Length = 233
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 322 NTGR-FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
N+GR RQ Y+ +Q +ELEKEF YL RR +S L LTERQIKIWFQNRRMK K+
Sbjct: 153 NSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKK 212
>gi|1334649|emb|CAA30122.1| unnamed protein product [Xenopus laevis]
Length = 114
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 23 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 78
>gi|63259070|gb|AAD46174.2|AF151671_1 Lox5 homeobox protein [Alitta virens]
Length = 132
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 7 RTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKK 62
>gi|241756306|ref|XP_002406404.1| fushi tarazu, putative [Ixodes scapularis]
gi|215506141|gb|EEC15635.1| fushi tarazu, putative [Ixodes scapularis]
Length = 110
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ LGLTERQIKIWFQNRRMK K+
Sbjct: 17 RTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKAKK 72
>gi|387231171|gb|AFJ72296.1| homeobox A9, partial [Rhinolophus marshalli]
Length = 78
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 19 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 73
>gi|14916585|sp|Q9IA12.1|HXD8_HETFR RecName: Full=Homeobox protein Hox-D8
gi|7271820|gb|AAF44632.1|AF224263_2 HoxD8 [Heterodontus francisci]
Length = 240
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 149 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 204
>gi|403183386|gb|EAT33900.2| AAEL013832-PA [Aedes aegypti]
Length = 418
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 198 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 257
>gi|194899151|ref|XP_001979124.1| GG10180 [Drosophila erecta]
gi|190650827|gb|EDV48082.1| GG10180 [Drosophila erecta]
Length = 467
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 324 GGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTR 383
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 384 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 433
>gi|3445432|emb|CAA07500.1| ultrabithorax-1 [Cupiennius salei]
Length = 142
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 7 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 63
Query: 385 MVVEYVKESSEARSASQKTN---HQSAPADTSAPN 416
++ +KE +E +Q HQ + + N
Sbjct: 64 --IQAIKELNEQERQAQAAKLAAHQKSSTTSGGNN 96
>gi|400180323|gb|AFP73291.1| Hoxa10alpha [Polyodon spathula]
Length = 337
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 256 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRCVHLTDRQVKIWFQNRR 315
Query: 376 MKLKR 380
MKLK+
Sbjct: 316 MKLKK 320
>gi|327283057|ref|XP_003226258.1| PREDICTED: homeobox protein Hox-D4-like [Anolis carolinensis]
Length = 244
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 128 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 187
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 188 TLCLSERQIKIWFQNRRMKWKKDH 211
>gi|297288642|ref|XP_001093087.2| PREDICTED: hypothetical protein LOC704713 [Macaca mulatta]
Length = 709
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 628 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 687
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 688 MKLKKMN 694
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
R Y+ +QI ELE+EF + Y+ ++R LS+ L LT+RQ+KIWFQNRRMK K+ + D +
Sbjct: 221 RCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKINRDRL 280
Query: 387 VEY 389
Y
Sbjct: 281 QYY 283
>gi|220898191|gb|ACL81446.1| HoxB3 [Latimeria menadoensis]
Length = 398
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 162 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 217
>gi|154183810|gb|ABS70752.1| Hoxa10b [Haplochromis burtoni]
Length = 332
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 251 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 310
Query: 376 MKLKR 380
MKLK+
Sbjct: 311 MKLKK 315
>gi|149639536|ref|XP_001516048.1| PREDICTED: homeobox protein Hox-D4-like [Ornithorhynchus anatinus]
Length = 239
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 124 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 183
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 184 TLCLSERQIKIWFQNRRMKWKKDH 207
>gi|547655|sp|Q01622.1|HLOX2_HELRO RecName: Full=Homeobox protein LOX2
gi|9444|emb|CAA78665.1| lox2 [Helobdella robusta]
Length = 429
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF+ YL RR LS L LTERQIKIWFQNRRMK K+
Sbjct: 219 RGRQTYTRYQTLELEKEFKFNRYLTRRRRIELSHTLYLTERQIKIWFQNRRMKEKK 274
>gi|432871361|ref|XP_004071927.1| PREDICTED: homeobox protein Hox-B2a-like [Oryzias latipes]
Length = 425
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%)
Query: 307 SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
S T S+Q + + R R Y++ Q++ELEKEF YL RR ++ L LTERQ
Sbjct: 157 SPTDSSQAALDASAAGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 216
Query: 367 IKIWFQNRRMKLKR 380
+K+WFQNRRMK KR
Sbjct: 217 VKVWFQNRRMKHKR 230
>gi|62857599|ref|NP_001015971.1| homeobox B3 [Xenopus (Silurana) tropicalis]
gi|89271899|emb|CAJ82652.1| homeo box B3 [Xenopus (Silurana) tropicalis]
gi|134026018|gb|AAI35407.1| homeobox B3 [Xenopus (Silurana) tropicalis]
Length = 386
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 158 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 213
>gi|313234711|emb|CBY10664.1| unnamed protein product [Oikopleura dioica]
Length = 154
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 278 LGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVE 337
LG+ DS ++ D +L + P +S Q ++ + R R Y+ HQ +E
Sbjct: 47 LGSCDSRENKSDDAKSLKIY------PWMRRMHSAQQNQQRPGNDNKRIRTAYTRHQTLE 100
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
LEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 101 LEKEFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKEH 145
>gi|311272691|ref|XP_003133546.1| PREDICTED: homeobox protein Hox-D4-like [Sus scrofa]
Length = 257
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 131 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 190
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 191 TLCLSERQIKIWFQNRRMKWKKDH 214
>gi|156387518|ref|XP_001634250.1| predicted protein [Nematostella vectensis]
gi|156221331|gb|EDO42187.1| predicted protein [Nematostella vectensis]
Length = 63
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+ R R Y++ Q++ELEKEF YL S RR+ +SK L LTERQ+KIWFQNRRMK K+
Sbjct: 1 SKRHRTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQVKIWFQNRRMKWKK 58
>gi|344249146|gb|EGW05250.1| Homeobox protein Hox-B2 [Cricetulus griseus]
Length = 407
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 48/89 (53%)
Query: 292 SNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSD 351
NLD + P PS H + R R Y++ Q++ELEKEF YL
Sbjct: 162 GNLDYNGAPPMAPSQHHGPYGPGLSESGGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRP 221
Query: 352 RRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RR ++ L LTERQ+K+WFQNRRMK KR
Sbjct: 222 RRVEIAALLDLTERQVKVWFQNRRMKHKR 250
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 356 LSKELGLTERQIKIWFQNRRMKLKR 380
++ L L+ERQIKIWFQNRRMK K+
Sbjct: 1 MANLLNLSERQIKIWFQNRRMKYKK 25
>gi|15029064|emb|CAC44978.1| homebox protein Hoxa9 [Xenopus laevis]
Length = 75
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 16 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 70
>gi|4322078|gb|AAD15948.1| homeobox protein [Danio rerio]
Length = 104
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ YS +Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+ H
Sbjct: 4 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKEH 61
>gi|3445436|emb|CAA07502.1| homeobox protein [Cupiennius salei]
Length = 245
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 134 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 193
>gi|11037558|gb|AAG27631.1|AF298186_1 homeodomain protein Hoxc10 short form [Ambystoma mexicanum]
Length = 100
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 19 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 78
Query: 376 MKLKRTHPD 384
MKLK+ + +
Sbjct: 79 MKLKKMNRE 87
>gi|348517821|ref|XP_003446431.1| PREDICTED: homeobox protein Hox-B3a-like [Oreochromis niloticus]
Length = 462
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 197 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 252
>gi|82621583|gb|ABB86463.1| anthox8a-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|83728469|gb|ABC41924.1| anthox8b-ANTP class homeobox protein [Nematostella vectensis]
gi|110338991|gb|ABG67759.1| HOXDa, partial [Nematostella vectensis]
gi|110338993|gb|ABG67760.1| HOXDb, partial [Nematostella vectensis]
Length = 60
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+ R R Y++ Q++ELEKEF YL S RR+ +SK L LTERQ+KIWFQNRRMK K+
Sbjct: 1 SKRHRTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQVKIWFQNRRMKWKK 58
>gi|17223058|gb|AAL36906.1|AF435001_1 Hox3 [Lithobius atkinsoni]
Length = 356
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 332 SHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
S Q+VELEKEF YL RR L+K+LGLT+RQIKIWFQNRRMK K+
Sbjct: 1 SAQLVELEKEFHFNRYLCRPRRVELAKQLGLTDRQIKIWFQNRRMKYKK 49
>gi|449268335|gb|EMC79204.1| Homeobox protein Hox-A9, partial [Columba livia]
Length = 77
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 18 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 72
>gi|58803015|gb|AAW82627.1| HoxD9a [Gasterosteus aculeatus]
Length = 277
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLT 363
PS + +N IH +T + R Y+ +Q +ELEKEF YL DRR +++ L LT
Sbjct: 194 PSKGNPAANWIHAR----STRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILSLT 249
Query: 364 ERQIKIWFQNRRMKLKR 380
ERQ+KIWFQNRRMK+K+
Sbjct: 250 ERQVKIWFQNRRMKMKK 266
>gi|295393193|gb|ADG03457.1| LD21370p [Drosophila melanogaster]
Length = 276
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 133 GGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTR 192
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 193 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 242
>gi|387231597|gb|AFJ72509.1| homeobox B8, partial [Aselliscus stoliczkanus]
Length = 101
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 6 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 61
>gi|64467|emb|CAA43908.1| homeobox [Xenopus borealis]
gi|59859875|gb|AAO43021.2| HoxA9 [Latimeria menadoensis]
Length = 78
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 19 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 73
>gi|443689510|gb|ELT91884.1| hypothetical protein CAPTEDRAFT_94902, partial [Capitella teleta]
Length = 100
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF+ +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 8 RGRQTYSRYQTLELEKEFQFNHYLTRKRRIEIAHALCLTERQIKIWFQNRRMKLKK 63
>gi|441678979|ref|XP_003282832.2| PREDICTED: homeobox protein Hox-B8-like, partial [Nomascus
leucogenys]
Length = 110
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 15 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 70
>gi|301128900|emb|CBL59362.1| HoxD8 [Scyliorhinus canicula]
Length = 239
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>gi|155371905|ref|NP_001094557.1| homeobox protein Hox-D4 [Bos taurus]
gi|154425967|gb|AAI51500.1| HOXD4 protein [Bos taurus]
gi|296490701|tpg|DAA32814.1| TPA: homeobox D4 [Bos taurus]
Length = 258
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 133 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 192
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 193 TLCLSERQIKIWFQNRRMKWKKDH 216
>gi|443689504|gb|ELT91878.1| hypothetical protein CAPTEDRAFT_219808 [Capitella teleta]
Length = 201
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 36 RARTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLTERQIKIWFQNRRMKYKKDQKQ 95
Query: 385 ---MVVEYVKESSEARSASQKTNHQSA 408
M +Y ++S + + +H+S
Sbjct: 96 KNLMEKQYAGDASMQDTQTLMDDHKSG 122
>gi|14916599|sp|Q9IA27.1|HXA10_HETFR RecName: Full=Homeobox protein Hox-A10
gi|7271836|gb|AAF44647.1|AF224262_9 HoxA10 [Heterodontus francisci]
Length = 271
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 190 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 249
Query: 376 MKLKR 380
MKLK+
Sbjct: 250 MKLKK 254
>gi|397327508|gb|AFO42770.1| HOXD9 [Polyodon spathula]
Length = 267
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 18/170 (10%)
Query: 213 LERNVSHEEIRTHKKHEQPRKES--SYKETENTQFNSETNDLSKLEEPNKTSSILLAHLQ 270
L +VS + +H + E+ S K TE++ F ++ + P+ TS+
Sbjct: 103 LSTSVSFPGFHPNSRHYGIKPETLPSSKRTESSSFEAQAPSI-----PDFTSASF----- 152
Query: 271 QVQKDLGLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVY 330
KD A + SS DI SN +L + S+ +N IH +T + R Y
Sbjct: 153 SESKDKPAKAKEPFSS--DISSNSELMDETQQQLDPSNPAANWIHAR----STRKKRCPY 206
Query: 331 SSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+ +Q +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 207 TKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 256
>gi|301128889|emb|CBL59352.1| HoxB3 [Scyliorhinus canicula]
Length = 394
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 155 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 210
>gi|195446501|ref|XP_002070807.1| GK10826 [Drosophila willistoni]
gi|194166892|gb|EDW81793.1| GK10826 [Drosophila willistoni]
Length = 428
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 270 GGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTR 329
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 330 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 379
>gi|383849609|ref|XP_003700437.1| PREDICTED: uncharacterized protein LOC100877385 [Megachile
rotundata]
Length = 536
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 322 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 377
>gi|301128898|emb|CBL59360.1| HoxD10 [Scyliorhinus canicula]
Length = 336
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ +Q +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 255 NWLTAKSGRKKRCPYTKYQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 314
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 315 MKLKKMN 321
>gi|312071216|ref|XP_003138506.1| hox-type homeodomain protein [Loa loa]
gi|307766334|gb|EFO25568.1| hox-type homeodomain protein [Loa loa]
Length = 99
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR L++ LGLTERQIKIWFQNRRMK K+
Sbjct: 28 RGRQTYSRQQTLELEKEFHYNKYLTRRRRIELNRTLGLTERQIKIWFQNRRMKKKK 83
>gi|121308833|dbj|BAF43723.1| transcription factor Hox4 [Metacrinus rotundus]
Length = 280
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ QI+ELEKEF YL RR +++ LGL+ERQIKIWFQNRRMK K+
Sbjct: 188 RSRTSYTRQQILELEKEFHFNRYLTRRRRIEIAQALGLSERQIKIWFQNRRMKWKK 243
>gi|380028330|ref|XP_003697858.1| PREDICTED: uncharacterized protein LOC100873059 [Apis florea]
Length = 550
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 328 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 383
>gi|317419676|emb|CBN81713.1| Homeobox protein Hox-B6b [Dicentrarchus labrax]
Length = 275
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 322 NTGR-FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
N+GR RQ Y+ +Q +ELEKEF YL RR +S L LTERQIKIWFQNRRMK K+
Sbjct: 157 NSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKK 216
>gi|119370789|sp|Q1KKY1.1|HXB8A_FUGRU RecName: Full=Homeobox protein Hox-B8a
gi|94482795|gb|ABF22413.1| homeobox protein HoxB8a [Takifugu rubripes]
Length = 282
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+
Sbjct: 150 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 205
>gi|355695007|gb|AER99863.1| homeobox A9 [Mustela putorius furo]
Length = 73
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 15 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 69
>gi|307178555|gb|EFN67244.1| Homeotic protein antennapedia [Camponotus floridanus]
Length = 353
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 273 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 328
>gi|213514276|ref|NP_001135380.1| homeobox protein HoxB4aa [Salmo salar]
gi|157816091|gb|ABV82064.1| homeobox protein HoxB4aa [Salmo salar]
gi|158702269|gb|ABW77468.1| homeobox protein HoxB4aa [Salmo salar]
gi|223649156|gb|ACN11336.1| Homeobox protein Hox-B4a [Salmo salar]
Length = 250
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 308 HTYSNQIHKNLLQCN-TG-----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELG 361
+ + ++H N++ N TG R R Y+ Q++ELEKEF YL RR ++ L
Sbjct: 131 YPWMKKVHVNIVNPNYTGVGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLV 190
Query: 362 LTERQIKIWFQNRRMKLKRTH 382
L+ERQIKIWFQNRRMK K+ H
Sbjct: 191 LSERQIKIWFQNRRMKWKKDH 211
>gi|123241|sp|P24061.1|HXA7_COTJA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Quox-1
gi|213618|gb|AAA49501.1| homeobox gene [Coturnix coturnix]
Length = 242
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 39/58 (67%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
R RQ Y+ +Q +ELEKEF YL RR + L LTERQIKIWFQNRRMK K+ H
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEYAHALCLTERQIKIWFQNRRMKWKKEH 188
>gi|400180335|gb|AFP73302.1| Hoxa10beta [Polyodon spathula]
Length = 337
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 256 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRCVHLTDRQVKIWFQNRR 315
Query: 376 MKLKR 380
MKLK+
Sbjct: 316 MKLKK 320
>gi|255742460|gb|ACU32573.1| homeobox protein HoxC8 [Callorhinchus milii]
Length = 244
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 38/54 (70%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>gi|213513876|ref|NP_001133056.1| homeobox protein HoxB8ba2 [Salmo salar]
gi|157816133|gb|ABV82084.1| homeobox protein HoxB8ba2 [Salmo salar]
gi|158702289|gb|ABW77486.1| homeobox protein HoxB8ba [Salmo salar]
Length = 238
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 320 QCNTGR--FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMK 377
Q TGR RQ YS Q +ELEKEF +YL R+ +S L LTERQIKIWFQNRRMK
Sbjct: 139 QAATGRRRGRQAYSRFQTLELEKEFLFNSYLTRKRKVEVSHALALTERQIKIWFQNRRMK 198
Query: 378 LKR 380
K+
Sbjct: 199 WKK 201
>gi|3417236|emb|CAA64694.1| homeodomain protein [Girardia tigrina]
Length = 205
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 25/142 (17%)
Query: 245 FNSETNDLSKLEEPNKTSSILLAHLQQVQKDLGLGASDSLSSEKDI----PSNLDLSQIP 300
+S N L+K +EP K+ S L + L + A+ SS + I P N+D
Sbjct: 20 LDSSNNSLNKRDEPRKSDSKLESDLMVEISNQARSATPCSSSPESINEPNPGNMD----- 74
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
L+ ++ R R Y+ QI+ELEKEF YL RR +++ L
Sbjct: 75 ----------------QLILSDSKRNRTAYTRQQILELEKEFHFNKYLTRKRRNEIAQSL 118
Query: 361 GLTERQIKIWFQNRRMKLKRTH 382
L+E Q+KIWFQNRRMK K+ H
Sbjct: 119 QLSESQVKIWFQNRRMKWKKDH 140
>gi|24497544|ref|NP_710160.1| homeobox protein Hox-C6 isoform 2 [Homo sapiens]
gi|426372804|ref|XP_004053306.1| PREDICTED: homeobox protein Hox-C6 isoform 2 [Gorilla gorilla
gorilla]
gi|51412|emb|CAA31023.1| unnamed protein product [Mus musculus]
gi|26341506|dbj|BAC34415.1| unnamed protein product [Mus musculus]
gi|119617152|gb|EAW96746.1| homeobox C6, isoform CRA_a [Homo sapiens]
gi|189054716|dbj|BAG37349.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 61 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 116
>gi|357626567|gb|EHJ76618.1| antennapedia-like proteinue protein [Danaus plexippus]
Length = 303
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 224 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 279
>gi|322799471|gb|EFZ20779.1| hypothetical protein SINV_00447 [Solenopsis invicta]
Length = 195
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 67 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 126
>gi|312125843|gb|ADQ27865.1| fushi tarazu [Thermobia domestica]
Length = 369
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ Q +ELEKEF YL RR ++ LGL+ERQIKIWFQNRRMK K+
Sbjct: 237 RTRQTYTRFQTLELEKEFHFNKYLTRRRRIEIAHSLGLSERQIKIWFQNRRMKAKK 292
>gi|213513338|ref|NP_001133053.1| homeobox protein HoxB4ab [Salmo salar]
gi|157816109|gb|ABV82073.1| homeobox protein HoxB4ab [Salmo salar]
gi|158702281|gb|ABW77479.1| homeobox protien HoxB4ab [Salmo salar]
Length = 250
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 308 HTYSNQIHKNLLQCN-TG-----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELG 361
+ + ++H N++ N TG R R Y+ Q++ELEKEF YL RR ++ L
Sbjct: 131 YPWMKKVHVNIVNPNYTGVGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLV 190
Query: 362 LTERQIKIWFQNRRMKLKRTH 382
L+ERQIKIWFQNRRMK K+ H
Sbjct: 191 LSERQIKIWFQNRRMKWKKDH 211
>gi|51474|emb|CAA34517.1| unnamed protein product [Mus musculus]
Length = 153
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 61 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 116
>gi|410901643|ref|XP_003964305.1| PREDICTED: homeobox protein Hox-B8a-like [Takifugu rubripes]
Length = 283
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+
Sbjct: 151 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 206
>gi|259053111|emb|CAX11342.1| Hox3 protein [Parasteatoda tepidariorum]
Length = 606
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 235 RARTAYTSAQLVELEKEFHFNRYLCRPRRIEMASLLNLTERQIKIWFQNRRMKYKK 290
>gi|46395474|ref|NP_997060.1| homeobox protein Hox-D8 [Gallus gallus]
gi|123283|sp|P23459.1|HXD8_CHICK RecName: Full=Homeobox protein Hox-D8; AltName: Full=Homeobox
protein Hox-M; Short=Chox-M
gi|62701|emb|CAA40445.1| CHOX M product [Gallus gallus]
Length = 188
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 97 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 152
>gi|220898174|gb|ACL81430.1| HoxA10 [Latimeria menadoensis]
Length = 339
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 258 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 317
Query: 376 MKLKRTH 382
MKLK+ +
Sbjct: 318 MKLKKMN 324
>gi|348585693|ref|XP_003478605.1| PREDICTED: homeobox protein Hox-D4-like [Cavia porcellus]
Length = 254
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 129 PAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 188
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 189 TLCLSERQIKIWFQNRRMKWKKDH 212
>gi|266457590|ref|NP_001161164.1| antennapedia-like protein [Nasonia vitripennis]
gi|254047496|gb|ACT63883.1| Antennapedia-like protein [Nasonia vitripennis]
Length = 362
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 282 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 337
>gi|213515128|ref|NP_001133011.1| homeobox protein HoxC10ba [Salmo salar]
gi|157815974|gb|ABV82006.1| homeobox protein HoxC10ba [Salmo salar]
gi|158702345|gb|ABW77534.1| homeobox protein HoxC10ba [Salmo salar]
Length = 338
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
Y+ HQI+ELEKEF YL +RR +SK + L++RQ+KIWFQNRRMKLK+
Sbjct: 271 YTKHQILELEKEFLFNMYLTRERRLEISKSIDLSDRQVKIWFQNRRMKLKK 321
>gi|28629667|gb|AAO43039.1| HoxC10 [Latimeria menadoensis]
Length = 90
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 9 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 68
Query: 376 MKLKRTHPD 384
MKLK+ + +
Sbjct: 69 MKLKKMNRE 77
>gi|225581119|gb|ACN94690.1| GA10228 [Drosophila miranda]
Length = 345
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 202 GGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTR 261
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 262 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 311
>gi|287635|emb|CAA32637.1| unnamed protein product [Drosophila melanogaster]
Length = 415
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 277 GLGASDSLSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN----TGRFRQVYSS 332
G G SDS S + + S K P + + ++H N T R R Y+
Sbjct: 272 GGGDSDSESDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTR 331
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
+Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 332 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 381
>gi|24266676|gb|AAN52288.1| Hoxb3a protein [Morone saxatilis]
Length = 415
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+S Q+VELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 222 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 277
>gi|74267543|dbj|BAE44270.1| hoxB8a [Oryzias latipes]
gi|83016950|dbj|BAE53477.1| hoxB8a [Oryzias latipes]
Length = 274
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+
Sbjct: 151 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 206
>gi|354479688|ref|XP_003502041.1| PREDICTED: hypothetical protein LOC100762719 [Cricetulus griseus]
Length = 277
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 196 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 255
Query: 376 MKLKR 380
MKLK+
Sbjct: 256 MKLKK 260
>gi|395519829|ref|XP_003764044.1| PREDICTED: homeobox protein Hox-D8, partial [Sarcophilus harrisii]
Length = 184
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 93 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 148
>gi|37625188|gb|AAQ95789.1| HOXD4 [Xenopus laevis]
Length = 218
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
Query: 286 SEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEK 340
S++ P N L + PP+ + + ++H N + N TG R R Y+ Q++ELEK
Sbjct: 90 SQQQHPKNGTLGK----PPAIVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEK 145
Query: 341 EFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
EF YL RR ++ L L+E QIKIWFQNRRMK K+ H
Sbjct: 146 EFHFNRYLTRRRRIEIAHSLCLSECQIKIWFQNRRMKWKKDH 187
>gi|321475846|gb|EFX86808.1| putative homrotic deformed protein [Daphnia pulex]
Length = 469
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ HQI+ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 335 RQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 390
>gi|385654502|gb|AFI61999.1| Hox-C10a [Anguilla japonica]
Length = 342
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 22/108 (20%)
Query: 275 DLGLGASDS-LSSEKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQV-YSS 332
D+ G+SDS L E PSN+D + + L +GR ++ Y+
Sbjct: 238 DISAGSSDSELLKE---PSNVD-----------------KATGSWLTAKSGRKKRCPYTK 277
Query: 333 HQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
HQ +ELEKEF YL +RR +SK + L++RQ+KIWFQNRRMKLK+
Sbjct: 278 HQTLELEKEFLFNMYLTRERRLEISKSINLSDRQVKIWFQNRRMKLKK 325
>gi|255742477|gb|ACU32589.1| homeobox protein HoxD4 [Callorhinchus milii]
Length = 238
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + +IH N + N TG R R Y+ Q++ELEKEF YL RR ++
Sbjct: 122 PAVVYPWMKKIHVNNVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 181
Query: 359 ELGLTERQIKIWFQNRRMKLKRTH 382
L L+ERQIKIWFQNRRMK K+ H
Sbjct: 182 TLCLSERQIKIWFQNRRMKWKKDH 205
>gi|82621607|gb|ABB86475.1| anthox7-ANTP class homeobox protein, partial [Nematostella
vectensis]
Length = 60
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R+R Y++ Q++ELEKEF YL RR+ L+ + LTERQ+K+WFQNRRMKLK+
Sbjct: 1 TKRYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMKLKK 58
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.128 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,211,932,551
Number of Sequences: 23463169
Number of extensions: 400884887
Number of successful extensions: 1595538
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16518
Number of HSP's successfully gapped in prelim test: 6336
Number of HSP's that attempted gapping in prelim test: 1545781
Number of HSP's gapped (non-prelim): 53259
length of query: 575
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 427
effective length of database: 8,886,646,355
effective search space: 3794597993585
effective search space used: 3794597993585
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 80 (35.4 bits)