Your job contains 1 sequence.
>psy4272
MLPRAGVSPPGVSSEDSKTSPQNRKISPSKGVPSLLPMKDIRTSDPDWPRPTASFAATIA
DVATKTLPVIQELLSQRDGKPVGKATLPSPLKAKLSDYENKMKNVRESIRQKRLAQGLTC
LQCGRSYCRPYNLKRHIQYECGKAPQFPCLYCSYRARHKHDLKKHVTFKHAAYLDHFQAV
QEELEVTTKELSPGPKAENRHRFREFLNEHRNLERNVSHEEIRTHKKHEQPRKESSYKET
ENTQFNSETNDLSKLEEPNKTSSILLAHLQQVQKDLGLGASDSLSSEKDIPSNLDLSQIP
KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL
GLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMK
SFEEFIREHYERSAVPFPASQPGEHPLATGELHGSPLEMQTLMEENASKLLLEKLREQTL
EKHLRENHLPVPSVPPLLAGALPPGQVEKLNDLYENERNMLIQELIRKKLGLLIQNNQNG
GHAEDAPTDLSRKLKSDMEEDEAVKEETEEEEDSA
The BLAST search returned 13 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4272
(575 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|D6RAR5 - symbol:D6RAR5 "Uncharacterized protein... 187 9.4e-14 1
UNIPROTKB|P51783 - symbol:HOXA9 "Homeobox protein Hox-A9"... 187 9.4e-14 1
ZFIN|ZDB-GENE-000823-1 - symbol:hoxa9a "homeo box A9a" sp... 186 1.2e-13 1
ZFIN|ZDB-GENE-990415-108 - symbol:hoxb8a "homeo box B8a" ... 182 3.3e-13 1
ZFIN|ZDB-GENE-980526-291 - symbol:hoxb8b "homeo box B8b" ... 181 4.2e-13 1
UNIPROTKB|F1RZG0 - symbol:HOXD4 "Uncharacterized protein"... 186 4.8e-13 1
UNIPROTKB|P09016 - symbol:HOXD4 "Homeobox protein Hox-D4"... 185 6.2e-13 1
UNIPROTKB|E2R520 - symbol:HOXA9 "Uncharacterized protein"... 190 6.2e-13 1
UNIPROTKB|F1SHT5 - symbol:LOC100737711 "Uncharacterized p... 190 6.2e-13 1
UNIPROTKB|F1NE14 - symbol:LOC100858551 "Uncharacterized p... 178 8.8e-13 1
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 178 8.8e-13 1
UNIPROTKB|H9L2H8 - symbol:Gga.20677 "Uncharacterized prot... 178 8.8e-13 1
UNIPROTKB|Q98924 - symbol:HOXA9 "Homeobox protein Hox-A9"... 178 8.8e-13 1
UNIPROTKB|P24341 - symbol:HOXD10 "Homeobox protein Hox-D1... 177 1.1e-12 1
ZFIN|ZDB-GENE-980526-216 - symbol:eng1a "engrailed 1a" sp... 177 1.1e-12 1
UNIPROTKB|B0W1V2 - symbol:abd-A "Homeobox protein abdomin... 176 1.5e-12 1
UNIPROTKB|A7MBD6 - symbol:HOXD4 "Uncharacterized protein"... 184 1.6e-12 1
MGI|MGI:96180 - symbol:Hoxa9 "homeobox A9" species:10090 ... 187 1.6e-12 1
RGD|1310001 - symbol:Hoxa9 "homeobox A9" species:10116 "R... 187 1.6e-12 1
UNIPROTKB|P31269 - symbol:HOXA9 "Homeobox protein Hox-A9"... 187 1.7e-12 1
ZFIN|ZDB-GENE-000328-2 - symbol:hoxb10a "homeo box B10a" ... 187 2.3e-12 1
UNIPROTKB|P17278 - symbol:HOXD4 "Homeobox protein Hox-D4"... 173 3.1e-12 1
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 173 3.1e-12 1
ZFIN|ZDB-GENE-990415-110 - symbol:hoxc10a "homeo box C10a... 180 3.5e-12 2
UNIPROTKB|P31268 - symbol:HOXA7 "Homeobox protein Hox-A7"... 172 3.9e-12 1
UNIPROTKB|F1SHT6 - symbol:F1SHT6 "Uncharacterized protein... 172 3.9e-12 1
UNIPROTKB|G3ECA1 - symbol:HoxA10 "Homebox A10" species:98... 172 3.9e-12 1
UNIPROTKB|I3LKE3 - symbol:HOXA7 "Uncharacterized protein"... 172 3.9e-12 1
MGI|MGI:96179 - symbol:Hoxa7 "homeobox A7" species:10090 ... 172 3.9e-12 1
UNIPROTKB|F1MEU5 - symbol:HOXC6 "Uncharacterized protein"... 167 4.8e-12 2
UNIPROTKB|E2QSK8 - symbol:HOXC6 "Uncharacterized protein"... 167 4.8e-12 2
UNIPROTKB|P09630 - symbol:HOXC6 "Homeobox protein Hox-C6"... 167 4.8e-12 2
UNIPROTKB|I3L9Q6 - symbol:HOXC6 "Uncharacterized protein"... 167 4.8e-12 2
MGI|MGI:96197 - symbol:Hoxc6 "homeobox C6" species:10090 ... 167 4.8e-12 2
UNIPROTKB|G3V841 - symbol:Hoxc6 "Homeo box C6" species:10... 167 4.8e-12 2
ZFIN|ZDB-GENE-990415-113 - symbol:hoxc6a "homeo box C6a" ... 171 5.0e-12 1
RGD|1309690 - symbol:Hoxd4 "homeo box D4" species:10116 "... 179 5.5e-12 1
UNIPROTKB|F1NZJ3 - symbol:HOXD4 "Homeobox protein Hox-D4"... 173 6.1e-12 1
UNIPROTKB|F1NZJ4 - symbol:HOXD8 "Homeobox protein Hox-D8"... 170 6.4e-12 1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"... 170 6.4e-12 1
UNIPROTKB|P23459 - symbol:HOXD8 "Homeobox protein Hox-D8"... 170 6.4e-12 1
ZFIN|ZDB-GENE-000823-2 - symbol:hoxa9b "homeo box A9b" sp... 179 6.9e-12 1
UNIPROTKB|Q8T940 - symbol:Ubx "Homeotic protein ultrabith... 178 9.7e-12 1
UNIPROTKB|F1NJG5 - symbol:LOC100858551 "Uncharacterized p... 178 1.1e-11 1
UNIPROTKB|E2RGY0 - symbol:HOXD4 "Uncharacterized protein"... 178 1.1e-11 1
UNIPROTKB|F1NE15 - symbol:LOC100858551 "Uncharacterized p... 168 1.1e-11 1
UNIPROTKB|F1NLW0 - symbol:LOC100858514 "Uncharacterized p... 168 1.1e-11 1
UNIPROTKB|Q90VZ9 - symbol:HOXA7 "Homeobox protein Hox-A7"... 168 1.1e-11 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 168 1.1e-11 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 168 1.1e-11 1
ZFIN|ZDB-GENE-000823-4 - symbol:hoxa4a "homeo box A4a" sp... 175 1.3e-11 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 167 1.4e-11 1
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"... 167 1.4e-11 1
RGD|1587253 - symbol:Hoxa7 "homeobox A7" species:10116 "R... 167 1.4e-11 1
UNIPROTKB|P09634 - symbol:Hoxa7 "Homeobox protein Hox-A7"... 167 1.4e-11 1
WB|WBGene00003102 - symbol:mab-5 species:6239 "Caenorhabd... 167 1.4e-11 1
UNIPROTKB|Q00444 - symbol:HOXC5 "Homeobox protein Hox-C5"... 166 1.7e-11 1
UNIPROTKB|I3LRP3 - symbol:LOC100627840 "Uncharacterized p... 166 1.7e-11 1
MGI|MGI:96196 - symbol:Hoxc5 "homeobox C5" species:10090 ... 166 1.7e-11 1
RGD|1307584 - symbol:Hoxc5 "homeo box C5" species:10116 "... 166 1.7e-11 1
UNIPROTKB|P46692 - symbol:CHOX-CAD1 "Homeobox protein CHO... 162 1.8e-11 2
FB|FBgn0004054 - symbol:zen2 "zerknullt-related" species:... 176 1.9e-11 1
UNIPROTKB|E2R5U1 - symbol:HOXA7 "Uncharacterized protein"... 172 2.0e-11 1
UNIPROTKB|P29552 - symbol:abd-A "Homeobox protein abdomin... 172 2.0e-11 1
UNIPROTKB|F1MY80 - symbol:LOC100847795 "Uncharacterized p... 181 2.0e-11 1
UNIPROTKB|P14840 - symbol:HOXB4 "Homeobox protein Hox-B4"... 174 2.1e-11 1
UNIPROTKB|F1RZG1 - symbol:HOXD8 "Uncharacterized protein"... 165 2.2e-11 1
RGD|621233 - symbol:Cdx1 "caudal type homeo box 1" specie... 165 2.2e-11 1
UNIPROTKB|Q05095 - symbol:Cdx1 "Homeobox protein CDX-1" s... 165 2.2e-11 1
ZFIN|ZDB-GENE-000823-7 - symbol:hoxb6b "homeo box B6b" sp... 165 2.2e-11 1
ZFIN|ZDB-GENE-990415-116 - symbol:hoxd10a "homeo box D10a... 183 2.3e-11 1
ZFIN|ZDB-GENE-990415-105 - symbol:hoxb4a "homeo box B4a" ... 174 2.4e-11 1
UNIPROTKB|F1SHT4 - symbol:HOXA7 "Uncharacterized protein"... 172 2.7e-11 1
UNIPROTKB|P14839 - symbol:HOXB6 "Homeobox protein Hox-B6"... 164 2.9e-11 1
UNIPROTKB|F1MCF6 - symbol:CDX1 "Uncharacterized protein" ... 164 2.9e-11 1
UNIPROTKB|F1P8H3 - symbol:HOXD8 "Uncharacterized protein"... 164 2.9e-11 1
UNIPROTKB|F8VXG1 - symbol:DLX3 "Homeobox protein DLX-3" s... 164 2.9e-11 1
UNIPROTKB|E1B8D8 - symbol:HOXA7 "Uncharacterized protein"... 171 3.0e-11 1
UNIPROTKB|Q9DEB6 - symbol:CDX1 "Homeobox protein CDX-1" s... 162 3.5e-11 2
UNIPROTKB|F6RKN3 - symbol:HOXA10 "Uncharacterized protein... 172 3.9e-11 2
MGI|MGI:96208 - symbol:Hoxd4 "homeobox D4" species:10090 ... 173 4.6e-11 1
UNIPROTKB|F1NC59 - symbol:F1NC59 "Uncharacterized protein... 162 4.7e-11 1
UNIPROTKB|F6R243 - symbol:CDX1 "Homeobox protein CDX-1" s... 162 4.7e-11 1
UNIPROTKB|P24340 - symbol:HOXD9 "Homeobox protein Hox-D9"... 162 4.7e-11 1
UNIPROTKB|F1NMY3 - symbol:HOXB8 "Homeobox protein Hox-B8"... 170 5.8e-11 1
UNIPROTKB|F8VSA3 - symbol:HOXD8 "Homeobox protein Hox-D8"... 161 6.0e-11 1
UNIPROTKB|Q9W7E8 - symbol:koza "Homeobox protein koza" sp... 161 6.0e-11 1
RGD|2321880 - symbol:LOC100360577 "homeobox A4-like" spec... 161 6.0e-11 1
UNIPROTKB|F1LWY9 - symbol:F1LWY9 "Uncharacterized protein... 161 6.0e-11 1
ZFIN|ZDB-GENE-980526-214 - symbol:hoxd4a "homeo box D4a" ... 173 6.4e-11 1
UNIPROTKB|F1PS13 - symbol:CDX4 "Uncharacterized protein" ... 176 6.5e-11 1
UNIPROTKB|E2RQ19 - symbol:HOXB8 "Uncharacterized protein"... 170 7.1e-11 1
UNIPROTKB|I3L3R1 - symbol:HOXB8 "Homeobox B8, isoform CRA... 170 7.1e-11 1
ZFIN|ZDB-GENE-990415-109 - symbol:hoxb9a "homeo box B9a" ... 172 7.4e-11 1
UNIPROTKB|P17481 - symbol:HOXB8 "Homeobox protein Hox-B8"... 170 7.7e-11 1
MGI|MGI:96189 - symbol:Hoxb8 "homeobox B8" species:10090 ... 170 7.7e-11 1
UNIPROTKB|G3V6Y1 - symbol:Hoxb8 "Homeo box B8 (Mapped)" s... 170 7.7e-11 1
UNIPROTKB|F1NMG4 - symbol:LOC100858374 "Uncharacterized p... 177 7.8e-11 1
UNIPROTKB|P17277 - symbol:HOXA4 "Homeobox protein Hox-A4"... 177 7.8e-11 1
UNIPROTKB|I3L564 - symbol:I3L564 "Uncharacterized protein... 175 8.0e-11 1
WARNING: Descriptions of 1194 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 187 (70.9 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 28 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 83
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 84 NLTERQVKIWFQNRRMKMKKINKD 107
>UNIPROTKB|P51783 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:10141 "Cavia
porcellus" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GO:GO:0045638 HOGENOM:HOG000294138 HOVERGEN:HBG016849
OrthoDB:EOG4D26QZ EMBL:X13536 PIR:A48428 ProteinModelPortal:P51783
SMR:P51783 Uniprot:P51783
Length = 162
Score = 187 (70.9 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 78 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 133
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 134 NLTERQVKIWFQNRRMKMKKINKD 157
>ZFIN|ZDB-GENE-000823-1 [details] [associations]
symbol:hoxa9a "homeo box A9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-1 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG286554 GeneTree:ENSGT00700000104054 EMBL:CR382300
HOVERGEN:HBG016849 EMBL:AF071248 EMBL:BC090700 EMBL:DQ060535
EMBL:Y14538 IPI:IPI00499910 RefSeq:NP_571607.2 UniGene:Dr.5730
ProteinModelPortal:Q9PWL6 SMR:Q9PWL6 STRING:Q9PWL6
Ensembl:ENSDART00000006934 Ensembl:ENSDART00000147736 GeneID:58047
KEGG:dre:58047 CTD:58047 HOGENOM:HOG000231180 InParanoid:Q9PWL6
OrthoDB:EOG4D26QZ NextBio:20892311 Bgee:Q9PWL6 InterPro:IPR017112
PIRSF:PIRSF037109 Uniprot:Q9PWL6
Length = 250
Score = 186 (70.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KP + SN +H + +T + R Y+ HQI+ELEKEF YL DRR +++ L
Sbjct: 166 KPGADPENPVSNWLHAS----STRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLL 221
Query: 361 GLTERQIKIWFQNRRMKLKR 380
LTERQ+KIWFQNRRMK+K+
Sbjct: 222 NLTERQVKIWFQNRRMKMKK 241
>ZFIN|ZDB-GENE-990415-108 [details] [associations]
symbol:hoxb8a "homeo box B8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-108 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104332 EMBL:BX927395
IPI:IPI00993559 Ensembl:ENSDART00000123837 ArrayExpress:E7FB54
Bgee:E7FB54 Uniprot:E7FB54
Length = 246
Score = 182 (69.1 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 44/92 (47%), Positives = 52/92 (56%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+ +
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 207
Query: 383 ---PDMVVEYVKESSEARSASQKTNHQSAPAD 411
P E + E R Q + QSA D
Sbjct: 208 DKFPSSKSEQEQIEKEKREKEQASGTQSAGED 239
>ZFIN|ZDB-GENE-980526-291 [details] [associations]
symbol:hoxb8b "homeo box B8b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-291
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 HOVERGEN:HBG016849
EMBL:AL645798 GeneTree:ENSGT00700000104332 EMBL:DQ060549
EMBL:AF071255 EMBL:Y14534 IPI:IPI00480876 RefSeq:NP_571256.1
UniGene:Dr.132197 ProteinModelPortal:Q8JH55 SMR:Q8JH55
Ensembl:ENSDART00000076154 GeneID:30420 KEGG:dre:30420 CTD:30420
eggNOG:NOG314669 InParanoid:Q8JH55 OrthoDB:EOG4H464V
NextBio:20806825 ArrayExpress:Q8JH55 Bgee:Q8JH55 Uniprot:Q8JH55
Length = 247
Score = 181 (68.8 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 44/96 (45%), Positives = 53/96 (55%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R RQ YS +Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+ H
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKEHNK 206
Query: 383 ---PDMVVEYVKESSEARSASQKTN-HQSAPADTSA 414
P E + E + SQ + H S D+ A
Sbjct: 207 DKFPSSKAEQEEIERERQEGSQVSEKHTSGEEDSEA 242
>UNIPROTKB|F1RZG0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 OMA:EQGADYY EMBL:CU570829 RefSeq:XP_003133546.1
Ensembl:ENSSSCT00000017405 GeneID:100515690 KEGG:ssc:100515690
Uniprot:F1RZG0
Length = 257
Score = 186 (70.5 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 50/134 (37%), Positives = 73/134 (54%)
Query: 300 PK-PPPSSS-------HTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTN 346
PK PPP ++ + + ++H N + N TG R R Y+ Q++ELEKEF
Sbjct: 119 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 178
Query: 347 YLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQ 406
YL RR ++ L L+ERQIKIWFQNRRMK K+ H +++ RS+S ++
Sbjct: 179 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK-------LPNTKGRSSSSSSSSS 231
Query: 407 SAPADTSAPNTHMK 420
S + T AP H++
Sbjct: 232 SCSSST-APGQHLQ 244
>UNIPROTKB|P09016 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
EMBL:X17360 EMBL:X04706 EMBL:AK313885 EMBL:BC016763 EMBL:BC074797
IPI:IPI00012390 PIR:S10985 RefSeq:NP_055436.2 UniGene:Hs.591609
ProteinModelPortal:P09016 SMR:P09016 STRING:P09016
PhosphoSite:P09016 DMDM:20141491 PRIDE:P09016
Ensembl:ENST00000306324 GeneID:3233 KEGG:hsa:3233 UCSC:uc002uks.3
CTD:3233 GeneCards:GC02P177022 HGNC:HGNC:5138 MIM:142981
neXtProt:NX_P09016 PharmGKB:PA29412 InParanoid:P09016 OMA:EQGADYY
PhylomeDB:P09016 GenomeRNAi:3233 NextBio:12865 Bgee:P09016
CleanEx:HS_HOXD4 Genevestigator:P09016 GermOnline:ENSG00000170166
Uniprot:P09016
Length = 255
Score = 185 (70.2 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 47/128 (36%), Positives = 62/128 (48%)
Query: 288 KDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNY 347
K PS L Q P + N ++ N R R Y+ Q++ELEKEF Y
Sbjct: 119 KQPPSGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRY 178
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQS 407
L RR ++ L L+ERQIKIWFQNRRMK K+ H + K S + S+S +
Sbjct: 179 LTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK---LPNTKGRSSSSSSSSSCSSSV 235
Query: 408 APADTSAP 415
AP+ P
Sbjct: 236 APSQHLQP 243
>UNIPROTKB|E2R520 [details] [associations]
symbol:HOXA9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060216 "definitive hemopoiesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0042118 "endothelial cell activation"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0035115
GO:GO:0009954 GO:GO:0048706 GO:GO:0030879 GO:GO:0060216
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
CTD:3205 KO:K09294 OMA:SWLEPAP EMBL:AAEX03009390 RefSeq:XP_539489.2
ProteinModelPortal:E2R520 Ensembl:ENSCAFT00000004746 GeneID:482372
KEGG:cfa:482372 NextBio:20856985 Uniprot:E2R520
Length = 272
Score = 190 (71.9 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 40/84 (47%), Positives = 54/84 (64%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>UNIPROTKB|F1SHT5 [details] [associations]
symbol:LOC100737711 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
KO:K09294 OMA:SWLEPAP EMBL:CU570959 EMBL:CU480612
RefSeq:XP_003134886.1 RefSeq:XP_003484104.1
Ensembl:ENSSSCT00000018181 Ensembl:ENSSSCT00000029161
GeneID:100519066 GeneID:100737711 KEGG:ssc:100519066
KEGG:ssc:100737711 Uniprot:F1SHT5
Length = 272
Score = 190 (71.9 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 40/84 (47%), Positives = 54/84 (64%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP S+ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPSNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>UNIPROTKB|F1NE14 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00682592
Ensembl:ENSGALT00000018035 Uniprot:F1NE14
Length = 169
Score = 178 (67.7 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 85 KPHIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 140
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 141 NLTERQVKIWFQNRRMKMKKINKD 164
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 178 (67.7 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 14 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 73
Query: 376 MKLKR 380
MKLK+
Sbjct: 74 MKLKK 78
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 178 (67.7 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 18 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 77
Query: 376 MKLKR 380
MKLK+
Sbjct: 78 MKLKK 82
>UNIPROTKB|Q98924 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
HOVERGEN:HBG016849 HOGENOM:HOG000231180 EMBL:X97750 IPI:IPI00583350
UniGene:Gga.649 ProteinModelPortal:Q98924 SMR:Q98924 STRING:Q98924
InParanoid:Q98924 Uniprot:Q98924
Length = 169
Score = 178 (67.7 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 85 KPHIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 140
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 141 NLTERQVKIWFQNRRMKMKKINKD 164
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 14 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 73
Query: 376 MKLKR 380
MKLK+
Sbjct: 74 MKLKK 78
>ZFIN|ZDB-GENE-980526-216 [details] [associations]
symbol:eng1a "engrailed 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
Length = 231
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 45/180 (25%), Positives = 87/180 (48%)
Query: 207 LNEHRNLE---RNVSHEEIRTHKKHEQPRKESSYKETENTQFNSETNDLSKLEEPNKTSS 263
L HRN + N+ + ++ E+ ++S + T +S ++ +S +S
Sbjct: 24 LPAHRNTDFFIDNILRPDFGCKRERERVTRDSGVRPT--AVLDSRSDGVSSSASSTVSSP 81
Query: 264 ILLAHLQQVQKXXXXXXXXXXXXEKDI--PSNLDLSQIPKPPPSSSHTYSNQIHKNLLQC 321
+ + +V++ +K I P+ + ++ P S T + N +
Sbjct: 82 VSSSQSNKVEQGSSKSSSPSKDSQKQILWPAWVYCTRYSDRPSSGPRTRKLKKKNNNTES 141
Query: 322 NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
+ R R +++ Q+ L+ EF+ + Y+ RR+ L++ELGL E QIKIWFQN+R K+K++
Sbjct: 142 DDKRPRTAFTAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQNKRAKIKKS 201
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 176 (67.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 47/110 (42%), Positives = 63/110 (57%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 41 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 100
Query: 381 THPDMVVEYVKESSE-ARSASQKTNHQSAPADTSAPNTHMKSFEEFIREH 429
+ VKE +E AR ++ + + SA H +S ++ +EH
Sbjct: 101 E-----LRAVKEINEQARREREEQDKMKNDSLKSAQQHH-QSQKQQQQEH 144
>UNIPROTKB|A7MBD6 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY EMBL:DAAA02004173
EMBL:BC151499 IPI:IPI00694463 RefSeq:NP_001094557.1
UniGene:Bt.41501 SMR:A7MBD6 Ensembl:ENSBTAT00000028606
GeneID:513306 KEGG:bta:513306 InParanoid:A7MBD6 NextBio:20870804
Uniprot:A7MBD6
Length = 258
Score = 184 (69.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 49/129 (37%), Positives = 68/129 (52%)
Query: 300 PK-PPPSSS-------HTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTN 346
PK PPP ++ + + ++H N + N TG R R Y+ Q++ELEKEF
Sbjct: 121 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 180
Query: 347 YLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQ 406
YL RR ++ L L+ERQIKIWFQNRRMK K+ H + K S + S+S +
Sbjct: 181 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK---LPNTKGRSSSSSSSSSCSSS 237
Query: 407 SAPADTSAP 415
+AP P
Sbjct: 238 TAPGQHLQP 246
>MGI|MGI:96180 [details] [associations]
symbol:Hoxa9 "homeobox A9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0009954 "proximal/distal
pattern formation" evidence=IGI] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030879 "mammary gland development" evidence=IGI]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI]
[GO:0042118 "endothelial cell activation" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048706 "embryonic skeletal system development"
evidence=IGI;IMP] [GO:0060216 "definitive hemopoiesis"
evidence=IGI] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96180
GO:GO:0005737 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 eggNOG:NOG286554 GO:GO:0035115
GO:GO:0009954 GO:GO:0048706 GO:GO:0030879 GO:GO:0045638
GO:GO:0060216 GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 OrthoDB:EOG4D26QZ InterPro:IPR017112
PIRSF:PIRSF037109 CTD:3205 KO:K09294 OMA:SWLEPAP EMBL:AB005457
EMBL:AB005458 EMBL:AB008914 EMBL:BC055059 EMBL:M28449
IPI:IPI00108996 IPI:IPI00230762 PIR:A31400 PIR:JC6553
RefSeq:NP_034586.1 UniGene:Mm.4694 PDB:1PUF PDBsum:1PUF
ProteinModelPortal:P09631 SMR:P09631 DIP:DIP-35619N IntAct:P09631
MINT:MINT-210007 STRING:P09631 PhosphoSite:P09631 PRIDE:P09631
Ensembl:ENSMUST00000048680 Ensembl:ENSMUST00000114425 GeneID:15405
KEGG:mmu:15405 UCSC:uc009byl.1 InParanoid:P09631
EvolutionaryTrace:P09631 NextBio:288114 Bgee:P09631
CleanEx:MM_HOXA9 Genevestigator:P09631
GermOnline:ENSMUSG00000038227 Uniprot:P09631
Length = 271
Score = 187 (70.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 187 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 242
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 243 NLTERQVKIWFQNRRMKMKKINKD 266
>RGD|1310001 [details] [associations]
symbol:Hoxa9 "homeobox A9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030879 "mammary gland development" evidence=ISO]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
[GO:0042118 "endothelial cell activation" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0060216 "definitive hemopoiesis" evidence=ISO]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1310001 GO:GO:0005737
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0035115 GO:GO:0009954 GO:GO:0048706
GO:GO:0030879 GO:GO:0060216 OrthoDB:EOG4D26QZ InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 OMA:SWLEPAP EMBL:CH474011 EMBL:AC122669
IPI:IPI00191520 RefSeq:XP_001057018.1 RefSeq:XP_003749799.1
RefSeq:XP_003749806.1 RefSeq:XP_003752231.1
Ensembl:ENSRNOT00000009487 GeneID:100909740 GeneID:100911710
GeneID:297099 KEGG:rno:100909740 KEGG:rno:100911710 KEGG:rno:297099
UCSC:RGD:1310001 CTD:297099 NextBio:642059 Uniprot:D3ZSU5
Length = 271
Score = 187 (70.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 187 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 242
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 243 NLTERQVKIWFQNRRMKMKKINKD 266
>UNIPROTKB|P31269 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=ISS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0042118 "endothelial
cell activation" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GO:GO:0042118 GO:GO:0045638 EMBL:AC004080 UniGene:Hs.659350
HOVERGEN:HBG016849 HOGENOM:HOG000231180 OrthoDB:EOG4D26QZ
InterPro:IPR017112 PIRSF:PIRSF037109 EMBL:U82759 EMBL:AF010258
EMBL:BT006990 EMBL:BC006537 EMBL:BC010023 EMBL:U41813
IPI:IPI00010744 PIR:S14929 RefSeq:NP_689952.1
ProteinModelPortal:P31269 SMR:P31269 IntAct:P31269 STRING:P31269
PhosphoSite:P31269 DMDM:6166219 PRIDE:P31269 DNASU:3205
Ensembl:ENST00000343483 GeneID:3205 KEGG:hsa:3205 UCSC:uc003syt.3
CTD:3205 GeneCards:GC07M027214 HGNC:HGNC:5109 MIM:142956
neXtProt:NX_P31269 PharmGKB:PA29386 InParanoid:P31269 KO:K09294
OMA:SWLEPAP PhylomeDB:P31269 ChiTaRS:HOXA9 GenomeRNAi:3205
NextBio:12752 ArrayExpress:P31269 Bgee:P31269 CleanEx:HS_HOXA9
Genevestigator:P31269 GermOnline:ENSG00000078399 Uniprot:P31269
Length = 272
Score = 187 (70.9 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KPP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 188 KPPIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 243
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 244 NLTERQVKIWFQNRRMKMKKINKD 267
>ZFIN|ZDB-GENE-000328-2 [details] [associations]
symbol:hoxb10a "homeo box B10a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000328-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG248153
HOGENOM:HOG000231182 HOVERGEN:HBG052934 EMBL:BC155298 EMBL:BC163689
EMBL:AF071250 EMBL:Y14531 IPI:IPI00512100 UniGene:Dr.75788
STRING:Q9PWL7 InParanoid:Q9PWL7 ArrayExpress:Q9PWL7 Uniprot:Q9PWL7
Length = 279
Score = 187 (70.9 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 44/97 (45%), Positives = 60/97 (61%)
Query: 289 DI-PSNL--DLSQIPKPPPSSSHTYSNQIHKN-LLQCNTGRFRQV-YSSHQIVELEKEFR 343
DI P+NL D ++ K P + + + N L GR ++ YS HQI+ELEKEF
Sbjct: 167 DIEPNNLQTDFTRGDKTPREKTQDVTLENAANGWLSAKAGRKKRCPYSKHQILELEKEFL 226
Query: 344 LTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YL +RR +S+ + LT+RQ+KIWFQNRRMKLK+
Sbjct: 227 FNMYLTRERRLEISRSINLTDRQVKIWFQNRRMKLKK 263
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 173 (66.0 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 45/115 (39%), Positives = 65/115 (56%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N +G R R Y+ Q++ELEKEF YL RR ++
Sbjct: 120 PAVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 179
Query: 359 ELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTN-H-QSAPAD 411
L L+ERQIKIWFQNRRMK K+ H +++ RS+S +N H Q+ P D
Sbjct: 180 TLCLSERQIKIWFQNRRMKWKKDHK-------LPNTKGRSSSSASNPHLQTVPKD 227
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 173 (66.0 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/58 (62%), Positives = 41/58 (70%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 11 TQRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 68
>ZFIN|ZDB-GENE-990415-110 [details] [associations]
symbol:hoxc10a "homeo box C10a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-110 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231182 HOVERGEN:HBG052934
GeneTree:ENSGT00700000104054 eggNOG:NOG269631 EMBL:BX005254
IPI:IPI00770485 UniGene:Dr.75791 SMR:A2BE66
Ensembl:ENSDART00000053295 Ensembl:ENSDART00000130260
InParanoid:A2BE66 OMA:MSCPNNI OrthoDB:EOG4PNXHS Uniprot:A2BE66
Length = 337
Score = 180 (68.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L+ +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 257 NWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRR 316
Query: 376 MKLKR 380
MKLK+
Sbjct: 317 MKLKK 321
Score = 51 (23.0 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 230 QPRKESSYKETENTQFNSETN--DLSKLEE 257
Q RKE S +TE+ +SE+ D SKLE+
Sbjct: 224 QTRKEESVSKTESCTDDSESELKDESKLEK 253
>UNIPROTKB|P31268 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048863 "stem cell differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0001525
"angiogenesis" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0002686 "negative regulation of leukocyte
migration" evidence=IDA] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IDA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122
GO:GO:0001953 GO:GO:0048704 eggNOG:NOG238660 EMBL:AC004080
HOVERGEN:HBG016849 CTD:3204 KO:K09307 EMBL:AF026397 EMBL:AJ005814
EMBL:AF032095 EMBL:X84803 EMBL:X84804 EMBL:U92543 IPI:IPI00010743
PIR:S15536 RefSeq:NP_008827.2 UniGene:Hs.610216 UniGene:Hs.660918
ProteinModelPortal:P31268 SMR:P31268 IntAct:P31268 STRING:P31268
PhosphoSite:P31268 DMDM:311033439 PRIDE:P31268 DNASU:3204
Ensembl:ENST00000242159 GeneID:3204 KEGG:hsa:3204 UCSC:uc003sys.3
GeneCards:GC07M027193 HGNC:HGNC:5108 MIM:142950 neXtProt:NX_P31268
PharmGKB:PA29385 InParanoid:P31268 OMA:EHKDEGP OrthoDB:EOG4C87V5
PhylomeDB:P31268 GenomeRNAi:3204 NextBio:12748 ArrayExpress:P31268
Bgee:P31268 CleanEx:HS_HOXA7 Genevestigator:P31268
GermOnline:ENSG00000122592 GO:GO:0045617 GO:GO:0045656
Uniprot:P31268
Length = 230
Score = 172 (65.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 172 (65.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 12 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 71
Query: 376 MKLKR 380
MKLK+
Sbjct: 72 MKLKK 76
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 172 (65.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 13 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 72
Query: 376 MKLKR 380
MKLK+
Sbjct: 73 MKLKK 77
>UNIPROTKB|I3LKE3 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 EMBL:CU570959 RefSeq:XP_003134888.1
Ensembl:ENSSSCT00000030592 GeneID:100519456 KEGG:ssc:100519456
Uniprot:I3LKE3
Length = 234
Score = 172 (65.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>MGI|MGI:96179 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0001953 "negative
regulation of cell-matrix adhesion" evidence=ISO] [GO:0002686
"negative regulation of leukocyte migration" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045617 "negative regulation of keratinocyte
differentiation" evidence=ISO] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048863 "stem cell
differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96179
GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0048863 GO:GO:0002686 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG016849 CTD:3204
KO:K09307 OrthoDB:EOG4W9J4Z OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656
EMBL:M17192 EMBL:U15972 EMBL:AK033500 EMBL:BC131978 EMBL:BC132643
IPI:IPI00113735 PIR:A03314 PIR:A28329 RefSeq:NP_034585.1
UniGene:Mm.294826 ProteinModelPortal:P02830 SMR:P02830
IntAct:P02830 MINT:MINT-1172633 STRING:P02830 PRIDE:P02830
Ensembl:ENSMUST00000048715 GeneID:15404 KEGG:mmu:15404
UCSC:uc009byj.1 InParanoid:A2RS54 NextBio:288110 Bgee:P02830
CleanEx:MM_HOXA7 Genevestigator:P02830
GermOnline:ENSMUSG00000038236 Uniprot:P02830
Length = 229
Score = 172 (65.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>UNIPROTKB|F1MEU5 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:DAAA02012839 IPI:IPI00704983 RefSeq:XP_002687279.1
RefSeq:XP_869789.3 UniGene:Bt.105698 ProteinModelPortal:F1MEU5
Ensembl:ENSBTAT00000012174 GeneID:317660 KEGG:bta:317660
NextBio:20807136 Uniprot:F1MEU5
Length = 235
Score = 167 (63.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
Score = 43 (20.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 13 SSEDSKTSPQNRKIS 27
SSE +T+PQ++K S
Sbjct: 105 SSEQGRTAPQDQKAS 119
>UNIPROTKB|E2QSK8 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:AAEX03014973 RefSeq:XP_003433616.1
Ensembl:ENSCAFT00000010669 GeneID:486499 KEGG:cfa:486499
NextBio:20860262 Uniprot:E2QSK8
Length = 235
Score = 167 (63.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
Score = 43 (20.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 13 SSEDSKTSPQNRKIS 27
SSE +T+PQ++K S
Sbjct: 105 SSEQGRTAPQDQKAS 119
>UNIPROTKB|P09630 [details] [associations]
symbol:HOXC6 "Homeobox protein Hox-C6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0007275 "multicellular organismal
development" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003714 GO:GO:0009952 GO:GO:0043565
EMBL:CH471054 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306
UniGene:Hs.549040 eggNOG:NOG266030 OMA:MNSYFAN OrthoDB:EOG41NTMZ
EMBL:S82986 EMBL:M16938 EMBL:AK314829 EMBL:BC074844 EMBL:BC074845
IPI:IPI00015921 IPI:IPI00221294 PIR:B28030 RefSeq:NP_004494.1
RefSeq:NP_710160.1 ProteinModelPortal:P09630 SMR:P09630
STRING:P09630 PhosphoSite:P09630 DMDM:115502398 PRIDE:P09630
Ensembl:ENST00000243108 Ensembl:ENST00000394331 GeneID:3223
KEGG:hsa:3223 UCSC:uc001ses.3 CTD:3223 GeneCards:GC12P054384
HGNC:HGNC:5128 MIM:142972 neXtProt:NX_P09630 PharmGKB:PA29403
InParanoid:P09630 PhylomeDB:P09630 GenomeRNAi:3223 NextBio:12825
ArrayExpress:P09630 Bgee:P09630 CleanEx:HS_HOXC6
Genevestigator:P09630 GermOnline:ENSG00000197757 Uniprot:P09630
Length = 235
Score = 167 (63.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
Score = 43 (20.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 13 SSEDSKTSPQNRKIS 27
SSE +T+PQ++K S
Sbjct: 105 SSEQGRTAPQDQKAS 119
>UNIPROTKB|I3L9Q6 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
EMBL:FP579005 RefSeq:XP_003355472.1 ProteinModelPortal:I3L9Q6
Ensembl:ENSSSCT00000032524 GeneID:100627932 KEGG:ssc:100627932
Uniprot:I3L9Q6
Length = 235
Score = 167 (63.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
Score = 43 (20.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 13 SSEDSKTSPQNRKIS 27
SSE +T+PQ++K S
Sbjct: 105 SSEQGRTAPQDQKAS 119
>MGI|MGI:96197 [details] [associations]
symbol:Hoxc6 "homeobox C6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96197
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG266030
OMA:MNSYFAN OrthoDB:EOG41NTMZ CTD:3223 EMBL:J03074 EMBL:M35986
EMBL:X16511 EMBL:X16510 EMBL:S74185 EMBL:X12504 EMBL:X16838
IPI:IPI00310548 IPI:IPI00387269 PIR:A32167 PIR:A56568 PIR:S00987
RefSeq:NP_034595.2 UniGene:Mm.4444 ProteinModelPortal:P10629
SMR:P10629 STRING:P10629 PhosphoSite:P10629 PRIDE:P10629
Ensembl:ENSMUST00000001711 GeneID:15425 KEGG:mmu:15425
InParanoid:P10629 ChiTaRS:HOXC6 NextBio:288174 Bgee:P10629
CleanEx:MM_HOXC6 Genevestigator:P10629
GermOnline:ENSMUSG00000001661 Uniprot:P10629
Length = 235
Score = 167 (63.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
Score = 43 (20.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 13 SSEDSKTSPQNRKIS 27
SSE +T+PQ++K S
Sbjct: 105 SSEQGRTAPQDQKAS 119
>UNIPROTKB|G3V841 [details] [associations]
symbol:Hoxc6 "Homeo box C6" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:CH474035 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:AC116663 RefSeq:XP_001069410.2 RefSeq:XP_003750463.1
ProteinModelPortal:G3V841 SMR:G3V841 PRIDE:G3V841
Ensembl:ENSRNOT00000022217 GeneID:252885 KEGG:rno:252885
Uniprot:G3V841
Length = 235
Score = 167 (63.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 143 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 198
Score = 43 (20.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 13 SSEDSKTSPQNRKIS 27
SSE +T+PQ++K S
Sbjct: 105 SSEQGRTAPQDQKAS 119
>ZFIN|ZDB-GENE-990415-113 [details] [associations]
symbol:hoxc6a "homeo box C6a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-113
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
HOVERGEN:HBG016849 KO:K09306 EMBL:AF071265 EMBL:BC083307
EMBL:DQ060554 EMBL:X17266 EMBL:Y14546 IPI:IPI00494357 PIR:S08639
RefSeq:NP_571198.1 UniGene:Dr.132203 ProteinModelPortal:P15862
SMR:P15862 Ensembl:ENSDART00000103136 GeneID:30346 KEGG:dre:30346
CTD:30346 eggNOG:NOG266030 InParanoid:P15862 OMA:MNSYFAN
OrthoDB:EOG41NTMZ NextBio:20806776 ArrayExpress:P15862 Bgee:P15862
Uniprot:P15862
Length = 231
Score = 171 (65.3 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR-THP 383
R RQ+YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ T+
Sbjct: 144 RGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKETNL 203
Query: 384 DMVVEYVKESSEARSASQKTNHQSAPAD 411
V + + + ++T + D
Sbjct: 204 TSTVPGTESAGTPQETEKETEEEPKKKD 231
>RGD|1309690 [details] [associations]
symbol:Hoxd4 "homeo box D4" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1309690 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 EMBL:CH473949 KO:K09304
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY IPI:IPI00389332
RefSeq:NP_001099355.1 UniGene:Rn.141410 Ensembl:ENSRNOT00000002145
GeneID:288153 KEGG:rno:288153 UCSC:RGD:1309690 NextBio:627686
Uniprot:D4ACE1
Length = 251
Score = 179 (68.1 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 47/121 (38%), Positives = 65/121 (53%)
Query: 300 PK-PPPSSS-------HTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTN 346
PK PPP ++ + + ++H N + N TG R R Y+ Q++ELEKEF
Sbjct: 116 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 175
Query: 347 YLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH--PDMVVEYVKESSEARSASQKTN 404
YL RR ++ L L+ERQIKIWFQNRRMK K+ H P+ SS S++ +
Sbjct: 176 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAPSQ 235
Query: 405 H 405
H
Sbjct: 236 H 236
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 173 (66.0 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 45/115 (39%), Positives = 65/115 (56%)
Query: 304 PSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P+ + + ++H N + N +G R R Y+ Q++ELEKEF YL RR ++
Sbjct: 122 PAVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 181
Query: 359 ELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTN-H-QSAPAD 411
L L+ERQIKIWFQNRRMK K+ H +++ RS+S +N H Q+ P D
Sbjct: 182 TLCLSERQIKIWFQNRRMKWKKDHK-------LPNTKGRSSSSASNPHLQTVPKD 229
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 170 (64.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 38/80 (47%), Positives = 48/80 (60%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+ +
Sbjct: 77 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 136
Query: 385 MVVEYVKESSEARSASQKTN 404
K+ + A ++T+
Sbjct: 137 DKFPASKQEGKEGEAKKETH 156
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 170 (64.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 38/80 (47%), Positives = 48/80 (60%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+ +
Sbjct: 57 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 116
Query: 385 MVVEYVKESSEARSASQKTN 404
K+ + A ++T+
Sbjct: 117 DKFPASKQEGKEGEAKKETH 136
>UNIPROTKB|P23459 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
CTD:3234 NextBio:20816351 Uniprot:P23459
Length = 188
Score = 170 (64.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 38/80 (47%), Positives = 48/80 (60%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+ +
Sbjct: 97 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 156
Query: 385 MVVEYVKESSEARSASQKTN 404
K+ + A ++T+
Sbjct: 157 DKFPASKQEGKEGEAKKETH 176
>ZFIN|ZDB-GENE-000823-2 [details] [associations]
symbol:hoxa9b "homeo box A9b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-2 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AL645795 HOVERGEN:HBG016849 HOGENOM:HOG000231180
OrthoDB:EOG4D26QZ InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:AF071249 EMBL:BC095300 EMBL:DQ060537 IPI:IPI00498950
RefSeq:NP_571608.1 UniGene:Dr.88308 ProteinModelPortal:Q9YGT5
SMR:Q9YGT5 STRING:Q9YGT5 GeneID:58048 KEGG:dre:58048 CTD:58048
eggNOG:NOG261069 NextBio:20892312 ArrayExpress:Q9YGT5
Uniprot:Q9YGT5
Length = 253
Score = 179 (68.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 42/98 (42%), Positives = 57/98 (58%)
Query: 287 EKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTN 346
++ IP+ L P P S N +H +T + R Y+ HQ +ELEKEF
Sbjct: 161 DEKIPAETKLDLDPNNPSS------NWLHAK----STRKKRCPYTKHQTLELEKEFLFNM 210
Query: 347 YLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
YL DRR +++ L LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 211 YLSRDRRYEVARLLNLTERQVKIWFQNRRMKMKKCNKD 248
>UNIPROTKB|Q8T940 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:39708
"Junonia coenia" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AY074760 ProteinModelPortal:Q8T940 SMR:Q8T940 Uniprot:Q8T940
Length = 253
Score = 178 (67.7 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 41/90 (45%), Positives = 55/90 (61%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 161 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 217
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSA 414
++ +KE +E +Q +A A +A
Sbjct: 218 --IQAIKELNEQEKQAQAQKAAAAAAAAAA 245
>UNIPROTKB|F1NJG5 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
IPI:IPI00583350 OMA:SWLEPAP EMBL:AADN02000988
Ensembl:ENSGALT00000019407 Uniprot:F1NJG5
Length = 254
Score = 178 (67.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
KP ++ +N +H +T + R Y+ HQ +ELEKEF YL DRR +++ L
Sbjct: 170 KPHIDPNNPAANWLHAR----STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL 225
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
LTERQ+KIWFQNRRMK+K+ + D
Sbjct: 226 NLTERQVKIWFQNRRMKMKKINKD 249
>UNIPROTKB|E2RGY0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 OMA:EQGADYY EMBL:AAEX03017790
EMBL:AAEX03017791 Ensembl:ENSCAFT00000021336 Uniprot:E2RGY0
Length = 254
Score = 178 (67.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 39/95 (41%), Positives = 57/95 (60%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ Q++ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 153 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK- 211
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTHM 419
+++ RS+S ++ S+ + ++AP H+
Sbjct: 212 ------LPNTKGRSSSSSSSSSSSCSSSAAPGQHL 240
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T + R Y+ HQ +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 1 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 58
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H +
Sbjct: 99 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 158
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H +
Sbjct: 131 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 190
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 19 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 72
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 19 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 72
>ZFIN|ZDB-GENE-000823-4 [details] [associations]
symbol:hoxa4a "homeo box A4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-4 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:CR382300 EMBL:AF071246 EMBL:BC122457 EMBL:DQ060533 EMBL:M76382
EMBL:Y13947 IPI:IPI00487552 PIR:S34415 RefSeq:NP_571610.1
UniGene:Dr.159437 ProteinModelPortal:Q9PWL5 SMR:Q9PWL5
Ensembl:ENSDART00000080466 GeneID:58050 KEGG:dre:58050 CTD:58050
eggNOG:NOG317510 HOGENOM:HOG000231179 HOVERGEN:HBG016849
InParanoid:Q9PWL5 OMA:PGDYYER OrthoDB:EOG4S1T87 NextBio:20892314
Bgee:Q9PWL5 Uniprot:Q9PWL5
Length = 245
Score = 175 (66.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 54/180 (30%), Positives = 85/180 (47%)
Query: 225 HKKHEQPRKESSYKETENTQFNSETNDLSKLEEPNKTSSILLAHLQQVQKXXXXXXXXXX 284
H++ PR S+Y+E N TNDL+ + + ++ +
Sbjct: 47 HEEASYPR--SNYQEQSYDYGNVSTNDLNDFSDRHHAQPQSVSQNHGPRLTTESCVGSDG 104
Query: 285 XXEKDIPSN-LDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVEL 338
+ + S+ L SQ K P + + ++H N + + +G R R Y+ Q +EL
Sbjct: 105 NKDCSLVSDALPGSQKSKEPVV--YPWMKKVHVNTVTASYSGGVPKRSRTAYTRQQALEL 162
Query: 339 EKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARS 398
EKEF YL RR ++ + L+ERQ+KIWFQNRRMK K+ H + ++ SS A S
Sbjct: 163 EKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHK-LPNTKIRSSSSAPS 221
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 167 (63.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ Q++ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 12 RSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK- 70
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAP 415
+ ++ + + SAS + ++ + +S P
Sbjct: 71 LPNTKIRSNPSSSSASLQIPPAASQSRSSGP 101
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 167 (63.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 40/94 (42%), Positives = 52/94 (55%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ Q++ELEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 37 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK- 95
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTH 418
+ SS + SAS A T +P+ H
Sbjct: 96 -LPNTKMRSSNSASASAGP---PGKAQTQSPHLH 125
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 167 (63.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/60 (56%), Positives = 40/60 (66%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL R ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 7 RGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKD 66
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 167 (63.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/60 (56%), Positives = 40/60 (66%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL R ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 7 RGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKD 66
>WB|WBGene00003102 [details] [associations]
symbol:mab-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0051179 "localization" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IGI;IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 KO:K09311 GO:GO:0000122
GO:GO:0030334 GO:GO:0045138 eggNOG:NOG238660 GO:GO:0050679
GO:GO:0042659 GO:GO:0051179 EMBL:FO080429
GeneTree:ENSGT00700000104189 EMBL:M22751 EMBL:AF277990 PIR:S44615
RefSeq:NP_498695.1 UniGene:Cel.18387 ProteinModelPortal:P10038
SMR:P10038 IntAct:P10038 MINT:MINT-1123728 STRING:P10038
EnsemblMetazoa:C08C3.3 GeneID:176091 KEGG:cel:CELE_C08C3.3
UCSC:C08C3.3 CTD:176091 WormBase:C08C3.3 InParanoid:P10038
OMA:TSANFGE NextBio:891072 Uniprot:P10038
Length = 200
Score = 167 (63.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR+ +S+ L LTERQ+KIWFQNRRMK K+
Sbjct: 119 RTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKK 174
>UNIPROTKB|Q00444 [details] [associations]
symbol:HOXC5 "Homeobox protein Hox-C5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG016849
HOGENOM:HOG000231178 KO:K09305 UniGene:Hs.549040 EMBL:X61755
IPI:IPI00022893 PIR:S20029 RefSeq:NP_061826.1
ProteinModelPortal:Q00444 SMR:Q00444 STRING:Q00444
PhosphoSite:Q00444 DMDM:232262 PRIDE:Q00444 DNASU:3222
Ensembl:ENST00000312492 GeneID:3222 KEGG:hsa:3222 UCSC:uc001sew.3
CTD:3222 GeneCards:GC12P054379 HGNC:HGNC:5127 HPA:HPA026794
MIM:142973 neXtProt:NX_Q00444 PharmGKB:PA29402 eggNOG:NOG286013
InParanoid:Q00444 OMA:CYSGLDL OrthoDB:EOG4CRM16 PhylomeDB:Q00444
GenomeRNAi:3222 NextBio:12820 Bgee:Q00444 Genevestigator:Q00444
GermOnline:ENSG00000172789 Uniprot:Q00444
Length = 222
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 38/85 (44%), Positives = 51/85 (60%)
Query: 296 LSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKV 355
LSQ P PP + + ++H + + + R R Y+ +Q +ELEKEF YL RR
Sbjct: 131 LSQPPAPP--QIYPWMTKLHMSH-ETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 356 LSKELGLTERQIKIWFQNRRMKLKR 380
++ L L ERQIKIWFQNRRMK K+
Sbjct: 188 IANNLCLNERQIKIWFQNRRMKWKK 212
>UNIPROTKB|I3LRP3 [details] [associations]
symbol:LOC100627840 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 KO:K09305 OMA:CYSGLDL EMBL:CU633419
EMBL:FP579005 RefSeq:XP_003126250.1 RefSeq:XP_003355471.1
SMR:I3LRP3 Ensembl:ENSSSCT00000028782 Ensembl:ENSSSCT00000031368
GeneID:100152707 GeneID:100627840 KEGG:ssc:100152707
KEGG:ssc:100627840 Uniprot:I3LRP3
Length = 222
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 38/85 (44%), Positives = 51/85 (60%)
Query: 296 LSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKV 355
LSQ P PP + + ++H + + + R R Y+ +Q +ELEKEF YL RR
Sbjct: 131 LSQPPAPP--QIYPWMTKLHMSH-ETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 356 LSKELGLTERQIKIWFQNRRMKLKR 380
++ L L ERQIKIWFQNRRMK K+
Sbjct: 188 IANNLCLNERQIKIWFQNRRMKWKK 212
>MGI|MGI:96196 [details] [associations]
symbol:Hoxc5 "homeobox C5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96196 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 GeneTree:ENSGT00700000104161
HOVERGEN:HBG016849 HOGENOM:HOG000231178 KO:K09305 CTD:3222
eggNOG:NOG286013 OMA:CYSGLDL OrthoDB:EOG4CRM16 EMBL:U28071
EMBL:AK078527 EMBL:BC115551 EMBL:BC115552 IPI:IPI00134225
PIR:A60084 RefSeq:NP_783857.1 UniGene:Mm.103825
ProteinModelPortal:P32043 SMR:P32043 STRING:P32043
PhosphoSite:P32043 PRIDE:P32043 Ensembl:ENSMUST00000001709
GeneID:15424 KEGG:mmu:15424 UCSC:uc007xxe.1 InParanoid:P32043
NextBio:288170 Bgee:P32043 CleanEx:MM_HOXC5 Genevestigator:P32043
GermOnline:ENSMUSG00000022485 Uniprot:P32043
Length = 222
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 38/85 (44%), Positives = 51/85 (60%)
Query: 296 LSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKV 355
LSQ P PP + + ++H + + + R R Y+ +Q +ELEKEF YL RR
Sbjct: 131 LSQPPAPP--QIYPWMTKLHMSH-ETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 356 LSKELGLTERQIKIWFQNRRMKLKR 380
++ L L ERQIKIWFQNRRMK K+
Sbjct: 188 IANNLCLNERQIKIWFQNRRMKWKK 212
>RGD|1307584 [details] [associations]
symbol:Hoxc5 "homeo box C5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048706 "embryonic skeletal system development"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1307584 GO:GO:0005634 GO:GO:0009952 GO:GO:0030054 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 EMBL:CH474035
GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222 OMA:CYSGLDL
OrthoDB:EOG4CRM16 EMBL:AC116663 IPI:IPI00210372
RefSeq:NP_001101586.1 UniGene:Rn.152771 SMR:D3ZP88
Ensembl:ENSRNOT00000022247 GeneID:315341 KEGG:rno:315341
NextBio:669109 Uniprot:D3ZP88
Length = 222
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 38/85 (44%), Positives = 51/85 (60%)
Query: 296 LSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKV 355
LSQ P PP + + ++H + + + R R Y+ +Q +ELEKEF YL RR
Sbjct: 131 LSQPPAPP--QIYPWMTKLHMSH-ETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 356 LSKELGLTERQIKIWFQNRRMKLKR 380
++ L L ERQIKIWFQNRRMK K+
Sbjct: 188 IANNLCLNERQIKIWFQNRRMKWKK 212
>UNIPROTKB|P46692 [details] [associations]
symbol:CHOX-CAD1 "Homeobox protein CHOX-CAD" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
UniGene:Gga.210 HOVERGEN:HBG005302 EMBL:X57760 EMBL:X57761
IPI:IPI00582961 PIR:S16417 ProteinModelPortal:P46692 SMR:P46692
STRING:P46692 InParanoid:P46692 Uniprot:P46692
Length = 248
Score = 162 (62.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 139 KYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVN 196
Score = 53 (23.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 1 MLPRAG--VSPPGVSSEDSKTSPQNRKISP----SKGVPSLLPMKDIRTSD 45
M P AG + PP +SS + SP ++ +P + +PS RT D
Sbjct: 88 MQPHAGSGLLPPAISSSVPQLSPNAQRRTPYEWMRRSIPSTSSSGKTRTKD 138
>FB|FBgn0004054 [details] [associations]
symbol:zen2 "zerknullt-related" species:7227 "Drosophila
melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007450
"dorsal/ventral pattern formation, imaginal disc" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE014297 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311 EMBL:AE001572
eggNOG:NOG325574 ChiTaRS:br GeneTree:ENSGT00700000104161
EMBL:X68348 PIR:B43697 RefSeq:NP_476794.1 UniGene:Dm.27226
ProteinModelPortal:P09090 SMR:P09090 EnsemblMetazoa:FBtr0081671
GeneID:40827 KEGG:dme:Dmel_CG1048 CTD:40827 FlyBase:FBgn0004054
InParanoid:P09090 OMA:CWDSNSS OrthoDB:EOG4KD53G PhylomeDB:P09090
GenomeRNAi:40827 NextBio:820795 Bgee:P09090 GermOnline:CG1048
Uniprot:P09090
Length = 252
Score = 176 (67.0 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 34/57 (59%), Positives = 43/57 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
R R +SS Q++ELE+EF L YL RR +S+ L LTERQ+KIWFQNRRMKLK++
Sbjct: 45 RSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKS 101
>UNIPROTKB|E2R5U1 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
CTD:3204 KO:K09307 OMA:EHKDEGP EMBL:AAEX03009390 RefSeq:XP_864678.2
Ensembl:ENSCAFT00000004737 GeneID:482371 KEGG:cfa:482371
Uniprot:E2R5U1
Length = 239
Score = 172 (65.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>UNIPROTKB|P29552 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
EnsemblMetazoa:AAEL009742-RA GeneID:5572355
KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
Length = 239
Score = 172 (65.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 44/99 (44%), Positives = 56/99 (56%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 19 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 78
Query: 381 THPDMVVEYVKESSE-ARSASQKTNHQSAPADTSAPNTH 418
+ VKE +E AR ++ + + SA H
Sbjct: 79 E-----LRAVKEINEQARREREEQDKMKNDSLKSAQQHH 112
>UNIPROTKB|F1MY80 [details] [associations]
symbol:LOC100847795 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0001501 GO:GO:0050905 GO:GO:0009954
GO:GO:0019907 GeneTree:ENSGT00700000104054 OMA:CGVMRGC
GO:GO:0021520 EMBL:DAAA02012841 EMBL:DAAA02012842 EMBL:DAAA02012843
IPI:IPI00705105 Ensembl:ENSBTAT00000004243 Uniprot:F1MY80
Length = 294
Score = 181 (68.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 40/95 (42%), Positives = 53/95 (55%)
Query: 287 EKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLT 345
EKD D S + + N L +GR ++ Y+ HQ +ELEKEF
Sbjct: 183 EKDRAKTADSSPDTSDNEAKEEIKAENTTGNWLTAKSGRKKRCPYTKHQTLELEKEFLFN 242
Query: 346 NYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YL +RR +SK + LT+RQ+KIWFQNRRMKLK+
Sbjct: 243 MYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKK 277
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 174 (66.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 291 PSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPS 350
PSN + P P + + ++ N R R Y+ Q++ELEKEF YL
Sbjct: 119 PSNSSCKE-PVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTR 177
Query: 351 DRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQSAPA 410
RR ++ L L+ERQIKIWFQNRRMK K+ H + ++ + + SAS + ++ +
Sbjct: 178 RRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK-LPNTKIRSNPSSSSASLQIPPAASQS 236
Query: 411 DTSAP 415
+S P
Sbjct: 237 RSSGP 241
>UNIPROTKB|F1RZG1 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0048705
GeneTree:ENSGT00700000104332 OMA:GQEYFHP EMBL:CU570829
Ensembl:ENSSSCT00000017404 Uniprot:F1RZG1
Length = 221
Score = 165 (63.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 41/95 (43%), Positives = 51/95 (53%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR-THP 383
R RQ YS Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+ +
Sbjct: 130 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNK 189
Query: 384 DMVVEYVKESSEARSASQKTNHQSAPADTSAPNTH 418
D ++ EA+ K Q D + T+
Sbjct: 190 D---KFPVSRQEAKDGETKKEAQELEEDRAEGPTN 221
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 165 (63.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/95 (37%), Positives = 54/95 (56%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 7 KYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKK 66
Query: 385 MVVEYVKESSEARSASQKTNHQSAPAD-TSAPNTH 418
+ ++ + +Q P D T P+ H
Sbjct: 67 KQQQQQQQQQQPMPPTQLP----LPLDGTPTPSGH 97
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 165 (63.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/95 (37%), Positives = 54/95 (56%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 7 KYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKK 66
Query: 385 MVVEYVKESSEARSASQKTNHQSAPAD-TSAPNTH 418
+ ++ + +Q P D T P+ H
Sbjct: 67 KQQQQQQQQQQPMPPTQLP----LPLDGTPTPSGH 97
>ZFIN|ZDB-GENE-000823-7 [details] [associations]
symbol:hoxb6b "homeo box B6b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-7 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 eggNOG:NOG305812 EMBL:AL645798 OrthoDB:EOG4G7C0G
EMBL:AF071254 EMBL:DQ060548 EMBL:Y14532 IPI:IPI00481961
UniGene:Dr.59927 ProteinModelPortal:Q9YGT4 SMR:Q9YGT4 STRING:Q9YGT4
InParanoid:Q9YGT4 ArrayExpress:Q9YGT4 Uniprot:Q9YGT4
Length = 224
Score = 165 (63.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 40/75 (53%), Positives = 46/75 (61%)
Query: 322 NTGRF-RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
+TGR RQ Y+ Q +ELEKEF YL RR +S L LTERQIKIWFQNRRMK K+
Sbjct: 145 STGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKK 204
Query: 381 THPDMVVEYVKESSE 395
+ V K S E
Sbjct: 205 ENK--AVNSAKVSDE 217
>ZFIN|ZDB-GENE-990415-116 [details] [associations]
symbol:hoxd10a "homeo box D10a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-116 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:BX322661 IPI:IPI00996139
Ensembl:ENSDART00000130837 ArrayExpress:E9QBR9 Bgee:E9QBR9
Uniprot:E9QBR9
Length = 341
Score = 183 (69.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 39/95 (41%), Positives = 56/95 (58%)
Query: 287 EKDIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLT 345
EK+ + +S P + ++ N L +GR ++ Y+ HQ +ELEKEF
Sbjct: 221 EKNCSTEASVSSPELPHREGKESKNDTPTSNWLTAKSGRKKRCPYTKHQTLELEKEFLFN 280
Query: 346 NYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YL +RR +SK + LT+RQ+KIWFQNRRMKLK+
Sbjct: 281 MYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKK 315
>ZFIN|ZDB-GENE-990415-105 [details] [associations]
symbol:hoxb4a "homeo box B4a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
Bgee:P22574 Uniprot:P22574
Length = 246
Score = 174 (66.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 44/124 (35%), Positives = 65/124 (52%)
Query: 291 PSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLT 345
P++ + S + + + ++H N++ N +G R R Y+ Q++ELEKEF
Sbjct: 114 PTSQNTSTVSSRKDPVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYN 173
Query: 346 NYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNH 405
YL RR ++ L L+ERQIKIWFQNRRMK K+ H +++ RS S TN
Sbjct: 174 RYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK-------LPNTKIRSNSASTNS 226
Query: 406 QSAP 409
P
Sbjct: 227 SGCP 230
>UNIPROTKB|F1SHT4 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656 EMBL:CU570959
Ensembl:ENSSSCT00000018182 Uniprot:F1SHT4
Length = 241
Score = 172 (65.6 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H D
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 191
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 164 (62.8 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ +
Sbjct: 9 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENKL 68
Query: 385 MVVEYVKESSEARSA 399
+ + E ++A
Sbjct: 69 LSSSQLSAEEEEKTA 83
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 164 (62.8 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 9 KYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 66
>UNIPROTKB|F1P8H3 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705
"skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 CTD:3234
OMA:GQEYFHP EMBL:AAEX03017789 RefSeq:XP_003434266.1
ProteinModelPortal:F1P8H3 Ensembl:ENSCAFT00000021331
GeneID:100687992 KEGG:cfa:100687992 Uniprot:F1P8H3
Length = 199
Score = 164 (62.8 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 40/88 (45%), Positives = 48/88 (54%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR-THP 383
R RQ YS Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+ +
Sbjct: 108 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNK 167
Query: 384 DMVVEYVKESSEARSASQKTNHQSAPAD 411
D ++ EA+ K Q D
Sbjct: 168 D---KFPVSRQEAKDGETKKEAQELEED 192
>UNIPROTKB|F8VXG1 [details] [associations]
symbol:DLX3 "Homeobox protein DLX-3" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0001890 "placenta development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568 GO:GO:0000976
HGNC:HGNC:2916 EMBL:AC009720 IPI:IPI01021511
ProteinModelPortal:F8VXG1 SMR:F8VXG1 Ensembl:ENST00000512495
ArrayExpress:F8VXG1 Bgee:F8VXG1 Uniprot:F8VXG1
Length = 167
Score = 164 (62.8 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
R +YSS+Q+ L++ F+ YL R L+ +LGLT+ Q+KIWFQNRR K K+ + +
Sbjct: 13 RTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGE 72
Query: 387 VEYVKESSEARSASQKTNHQSAPA--DTSAPNT 417
V E S S S N +PA DTS+ +T
Sbjct: 73 VPL--EHSPNNSDSMACNSPPSPALWDTSSHST 103
>UNIPROTKB|E1B8D8 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 CTD:3204 KO:K09307 OMA:EHKDEGP GO:GO:0045617
GO:GO:0045656 EMBL:DAAA02010938 IPI:IPI00715611
RefSeq:XP_002686901.1 RefSeq:XP_872865.2 Ensembl:ENSBTAT00000001908
GeneID:615851 KEGG:bta:615851 NextBio:20899823 Uniprot:E1B8D8
Length = 238
Score = 171 (65.3 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 44/100 (44%), Positives = 56/100 (56%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ H
Sbjct: 132 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH-- 189
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEE 424
KE S A S + + +A A +A K+ +E
Sbjct: 190 ------KEESPAASGAPEGAAPAASAAAAAAAAADKADDE 223
>UNIPROTKB|Q9DEB6 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
KO:K09312 EMBL:AB046532 IPI:IPI00807211 RefSeq:NP_990007.2
UniGene:Gga.210 ProteinModelPortal:Q9DEB6 SMR:Q9DEB6 STRING:Q9DEB6
Ensembl:ENSGALT00000009108 GeneID:395397 KEGG:gga:395397 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 InParanoid:Q9DEB6
OrthoDB:EOG42FSK7 NextBio:20815481 Uniprot:Q9DEB6
Length = 260
Score = 162 (62.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 151 KYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVN 208
Score = 53 (23.7 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 1 MLPRAG--VSPPGVSSEDSKTSPQNRKISP----SKGVPSLLPMKDIRTSD 45
M P AG + PP +SS + SP ++ +P + +PS RT D
Sbjct: 100 MQPHAGSGLLPPAISSSVPQLSPNAQRRTPYEWMRRSIPSTSSSGKTRTKD 150
>UNIPROTKB|F6RKN3 [details] [associations]
symbol:HOXA10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:DAAA02010938 EMBL:DAAA02010937
IPI:IPI00867074 Ensembl:ENSBTAT00000056468 Uniprot:F6RKN3
Length = 284
Score = 172 (65.6 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 203 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 262
Query: 376 MKLKR 380
MKLK+
Sbjct: 263 MKLKK 267
Score = 44 (20.5 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 14 SEDSKTSPQNRKISPSKG 31
SE SK SP+ + SKG
Sbjct: 181 SESSKASPEKDSLGNSKG 198
>MGI|MGI:96208 [details] [associations]
symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
Genevestigator:P10628 Uniprot:P10628
Length = 250
Score = 173 (66.0 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 47/123 (38%), Positives = 64/123 (52%)
Query: 300 PK-PPPSSS-------HTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTN 346
PK PPP ++ + + ++H N + N TG R R Y+ Q++ELEKEF
Sbjct: 116 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 175
Query: 347 YLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQ 406
YL RR ++ L L+ERQIKIWFQNRRMK K+ H + SS + S+S
Sbjct: 176 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSCSSSAAPGQH 235
Query: 407 SAP 409
P
Sbjct: 236 LQP 238
>UNIPROTKB|F1NC59 [details] [associations]
symbol:F1NC59 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 OMA:RRYEISQ EMBL:AADN02000989
IPI:IPI00822649 Ensembl:ENSGALT00000037820 Uniprot:F1NC59
Length = 59
Score = 162 (62.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRRMKLK+
Sbjct: 7 YTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRRMKLKK 57
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 162 (62.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 8 KYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVN 65
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 162 (62.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 323 TGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
T + R Y+ +Q +ELEKEF YL DRR +++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 1 TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 58
>UNIPROTKB|F1NMY3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
Uniprot:F1NMY3
Length = 240
Score = 170 (64.9 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 146 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 201
>UNIPROTKB|F8VSA3 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC009336 IPI:IPI01018181
HGNC:HGNC:5139 ProteinModelPortal:F8VSA3 SMR:F8VSA3
Ensembl:ENST00000548663 ArrayExpress:F8VSA3 Bgee:F8VSA3
Uniprot:F8VSA3
Length = 186
Score = 161 (61.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 34/56 (60%), Positives = 38/56 (67%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+
Sbjct: 95 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 150
>UNIPROTKB|Q9W7E8 [details] [associations]
symbol:koza "Homeobox protein koza" species:8355 "Xenopus
laevis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 HSSP:P22808
EMBL:AF127225 RefSeq:NP_001079169.1 UniGene:Xl.510
ProteinModelPortal:Q9W7E8 SMR:Q9W7E8 GeneID:373737 KEGG:xla:373737
CTD:373737 Xenbase:XB-GENE-6252708 HOVERGEN:HBG006689 KO:K09348
Uniprot:Q9W7E8
Length = 213
Score = 161 (61.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 36/91 (39%), Positives = 51/91 (56%)
Query: 314 IHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQN 373
+ L + R R +S Q++ELE++F YL + R L+K L LTE Q+KIWFQN
Sbjct: 93 VENKLAKQQQKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAKSLKLTETQVKIWFQN 152
Query: 374 RRMKLKRTHPDMVVEYVKESSEARSASQKTN 404
RR K KR +E V++SS + + TN
Sbjct: 153 RRYKTKRKQLATDMEEVEKSSAHPAQCRDTN 183
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 161 (61.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 44/126 (34%), Positives = 65/126 (51%)
Query: 300 PKPPPSSSHTYSNQIHKNLLQ--CNTG---RFRQVYSSHQIVELEKEFRLTNYLPSDRRK 354
PK + + +IH + + N G R R Y+ Q++ELEKEF YL RR
Sbjct: 56 PKGKEPVVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRI 115
Query: 355 VLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQSAP--ADT 412
++ L L+ERQ+KIWFQNRRMK K+ H +++ RS++ + P A T
Sbjct: 116 EIAHTLCLSERQVKIWFQNRRMKWKKDHK-------LPNTKMRSSNPASAPAGPPGKAQT 168
Query: 413 SAPNTH 418
+P+ H
Sbjct: 169 HSPHPH 174
>UNIPROTKB|F1LWY9 [details] [associations]
symbol:F1LWY9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 IPI:IPI00957183
Ensembl:ENSRNOT00000067861 Uniprot:F1LWY9
Length = 181
Score = 161 (61.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 34/56 (60%), Positives = 38/56 (67%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+
Sbjct: 90 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWKK 145
>ZFIN|ZDB-GENE-980526-214 [details] [associations]
symbol:hoxd4a "homeo box D4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
NextBio:20806762 Uniprot:B0S5Y5
Length = 256
Score = 173 (66.0 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 47/125 (37%), Positives = 65/125 (52%)
Query: 299 IPKPPPSSSHTYSNQIHKNLLQCN-TG----RFRQVYSSHQIVELEKEFRLTNYLPSDRR 353
IP P+ + + ++H + + TG R R Y+ Q++ELEKEF YL RR
Sbjct: 137 IPTKQPAVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRR 196
Query: 354 KVLSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNH-QSAPADT 412
++ L L+ERQIKIWFQNRRMK K+ H +++ RSAS H Q A D+
Sbjct: 197 IEIAHTLCLSERQIKIWFQNRRMKWKKDHK-------LPNTKGRSASVGNQHAQHAQKDS 249
Query: 413 SAPNT 417
T
Sbjct: 250 QTEIT 254
>UNIPROTKB|F1PS13 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ
EMBL:AAEX03026515 Ensembl:ENSCAFT00000027221 Uniprot:F1PS13
Length = 284
Score = 176 (67.0 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 40/102 (39%), Positives = 56/102 (54%)
Query: 303 PPSSSHTYSNQIHKNLLQCNTGR----FRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
P S H+ S + K L R +R VY+ HQ +ELEKEF Y+ R+ L+
Sbjct: 149 PNRSRHSPSAWMRKTLQVTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAV 208
Query: 359 ELGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSAS 400
LGL+ERQ+KIWFQNRR K ++T + ++ S +S S
Sbjct: 209 NLGLSERQVKIWFQNRRAKERKTIKKKISQFENSGSSVQSDS 250
>UNIPROTKB|E2RQ19 [details] [associations]
symbol:HOXB8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0021516
"dorsal spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:AAEX03006516
Ensembl:ENSCAFT00000026696 NextBio:20863956 Uniprot:E2RQ19
Length = 242
Score = 170 (64.9 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 202
>UNIPROTKB|I3L3R1 [details] [associations]
symbol:HOXB8 "Homeobox B8, isoform CRA_a" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0000976 EMBL:AC103702 UniGene:Hs.514292 HGNC:HGNC:5119
SMR:I3L3R1 Ensembl:ENST00000576562 Uniprot:I3L3R1
Length = 242
Score = 170 (64.9 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 147 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 202
>ZFIN|ZDB-GENE-990415-109 [details] [associations]
symbol:hoxb9a "homeo box B9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-109
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:BX927395 Ensembl:ENSDART00000006479 Bgee:H7BWW5 Uniprot:H7BWW5
Length = 253
Score = 172 (65.6 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 312 NQIHKNLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
N N L + R ++ Y+ +Q +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 176 NDPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIW 235
Query: 371 FQNRRMKLKRTHPDMVVE 388
FQNRRMK+K+ + D E
Sbjct: 236 FQNRRMKMKKMNKDQPKE 253
>UNIPROTKB|P17481 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007625 "grooming
behavior" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0009952 GO:GO:0019233 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0045638 GO:GO:0021516
HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V EMBL:AY014294
EMBL:AY014293 EMBL:X16173 IPI:IPI00014536 PIR:B37042
RefSeq:NP_076921.1 UniGene:Hs.514292 ProteinModelPortal:P17481
SMR:P17481 STRING:P17481 PhosphoSite:P17481 DMDM:20141506
PRIDE:P17481 DNASU:3218 Ensembl:ENST00000239144 GeneID:3218
KEGG:hsa:3218 UCSC:uc002inw.3 CTD:3218 GeneCards:GC17M046688
HGNC:HGNC:5119 MIM:142963 neXtProt:NX_P17481 PharmGKB:PA29395
InParanoid:P17481 KO:K09308 OMA:MERAQEV GenomeRNAi:3218
NextBio:12804 Bgee:P17481 CleanEx:HS_HOXB8 Genevestigator:P17481
GermOnline:ENSG00000120068 Uniprot:P17481
Length = 243
Score = 170 (64.9 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>MGI|MGI:96189 [details] [associations]
symbol:Hoxb8 "homeobox B8" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0019233 "sensory perception of pain" evidence=IMP] [GO:0021516
"dorsal spinal cord development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96189 GO:GO:0005634
GO:GO:0009952 GO:GO:0019233 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0000976
GO:GO:0007625 GO:GO:0045638 GO:GO:0021516 HOVERGEN:HBG016849
GeneTree:ENSGT00700000104332 eggNOG:NOG314669 OrthoDB:EOG4H464V
CTD:3218 KO:K09308 OMA:MERAQEV EMBL:X13961 EMBL:X13721 EMBL:M18399
EMBL:X54077 IPI:IPI00108997 PIR:S03712 RefSeq:NP_034591.1
UniGene:Mm.4822 ProteinModelPortal:P09632 SMR:P09632 DIP:DIP-35618N
IntAct:P09632 STRING:P09632 PhosphoSite:P09632 PRIDE:P09632
Ensembl:ENSMUST00000052650 Ensembl:ENSMUST00000168043 GeneID:15416
KEGG:mmu:15416 InParanoid:P09632 NextBio:288150 Bgee:P09632
CleanEx:MM_HOXB8 Genevestigator:P09632
GermOnline:ENSMUSG00000056648 Uniprot:P09632
Length = 243
Score = 170 (64.9 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>UNIPROTKB|G3V6Y1 [details] [associations]
symbol:Hoxb8 "Homeo box B8 (Mapped)" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1586211 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473948
GeneTree:ENSGT00700000104332 CTD:3218 KO:K09308 OMA:MERAQEV
UniGene:Rn.231433 RefSeq:NP_001178578.1 ProteinModelPortal:G3V6Y1
SMR:G3V6Y1 Ensembl:ENSRNOT00000009986 GeneID:24457 KEGG:rno:24457
NextBio:603373 Uniprot:G3V6Y1
Length = 243
Score = 170 (64.9 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 148 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 203
>UNIPROTKB|F1NMG4 [details] [associations]
symbol:LOC100858374 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 IPI:IPI00593052 EMBL:AADN02000981
Ensembl:ENSGALT00000018006 OMA:PSDEENM Uniprot:F1NMG4
Length = 309
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 40/95 (42%), Positives = 54/95 (56%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R R Y+ Q++ELEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 211 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKL 270
Query: 383 PDMVVEYVKESSEARS-ASQKTNHQSAPADTSAPN 416
P+ + + S + A +T P D +APN
Sbjct: 271 PNTKMRSSNQPSLGQQQAKAQTQGHPRPLDGAAPN 305
>UNIPROTKB|P17277 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
Length = 309
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 40/95 (42%), Positives = 54/95 (56%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R R Y+ Q++ELEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 211 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKL 270
Query: 383 PDMVVEYVKESSEARS-ASQKTNHQSAPADTSAPN 416
P+ + + S + A +T P D +APN
Sbjct: 271 PNTKMRSSNQPSLGQQQAKAQTQGHPRPLDGAAPN 305
>UNIPROTKB|I3L564 [details] [associations]
symbol:I3L564 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 Ensembl:ENSSSCT00000023533
Uniprot:I3L564
Length = 281
Score = 175 (66.7 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 218 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 277
Query: 376 MKLK 379
MKLK
Sbjct: 278 MKLK 281
>UNIPROTKB|J9P833 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
OMA:CYSGLDL EMBL:AAEX03014973 ProteinModelPortal:J9P833
Ensembl:ENSCAFT00000049441 Uniprot:J9P833
Length = 222
Score = 162 (62.1 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 37/84 (44%), Positives = 50/84 (59%)
Query: 297 SQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVL 356
SQ P PP + + ++H + + + R R Y+ +Q +ELEKEF YL RR +
Sbjct: 132 SQPPAPP--QIYPWMTKLHMSH-ETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 188
Query: 357 SKELGLTERQIKIWFQNRRMKLKR 380
+ L L ERQIKIWFQNRRMK K+
Sbjct: 189 ANNLCLNERQIKIWFQNRRMKWKK 212
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 159 (61.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 38/94 (40%), Positives = 58/94 (61%)
Query: 300 PKPPPSSSHTYSNQIHKNLLQCNTG-RFRQV---YSSHQIVELEKEFRLTNYLPSDRRKV 355
P+P SS S+ ++ ++G R R+ Y+ +QI ELE+EF + Y+ ++R
Sbjct: 104 PRPESGSSPESSSGNNEEKSGSSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQ 163
Query: 356 LSKELGLTERQIKIWFQNRRMKLKRTHPDMVVEY 389
LS+ L LT+RQ+KIWFQNRRMK K+ + D + Y
Sbjct: 164 LSRMLNLTDRQVKIWFQNRRMKEKKINRDRLQYY 197
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 159 (61.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 69 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 124
>UNIPROTKB|H9L183 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0030099 "myeloid cell differentiation" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 OMA:WMRSSGT
EMBL:AADN02027109 EMBL:AADN02027110 Ensembl:ENSGALT00000029852
Uniprot:H9L183
Length = 217
Score = 159 (61.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 139 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 194
>UNIPROTKB|F1N1K1 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 IPI:IPI00699636
UniGene:Bt.91790 OMA:WMRSSGT EMBL:DAAA02049062
Ensembl:ENSBTAT00000007292 Uniprot:F1N1K1
Length = 217
Score = 159 (61.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 139 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 194
>UNIPROTKB|Q9TT89 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 eggNOG:NOG238660 HOVERGEN:HBG016849 KO:K09307
OrthoDB:EOG4W9J4Z EMBL:AF200721 IPI:IPI00699636 RefSeq:NP_776767.1
UniGene:Bt.91790 ProteinModelPortal:Q9TT89 SMR:Q9TT89 PRIDE:Q9TT89
GeneID:281820 KEGG:bta:281820 CTD:3217 InParanoid:Q9TT89
NextBio:20805731 Uniprot:Q9TT89
Length = 217
Score = 159 (61.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 139 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 194
>UNIPROTKB|F6UVS6 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 CTD:3217 OMA:WMRSSGT Ensembl:ENSCAFT00000026688
EMBL:AAEX03006516 RefSeq:XP_851221.1 GeneID:608962 KEGG:cfa:608962
Uniprot:F6UVS6
Length = 217
Score = 159 (61.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 139 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 194
>UNIPROTKB|P09629 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0090190 GO:GO:0048704
eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849 KO:K09307
OrthoDB:EOG4W9J4Z EMBL:AC103702 CTD:3217 EMBL:M16937 EMBL:AK290653
EMBL:AK223249 EMBL:BC015345 EMBL:S49765 EMBL:M30598 IPI:IPI00297418
PIR:A28030 RefSeq:NP_004493.3 UniGene:Hs.436181
ProteinModelPortal:P09629 SMR:P09629 IntAct:P09629 STRING:P09629
PhosphoSite:P09629 DMDM:311033482 PRIDE:P09629 DNASU:3217
Ensembl:ENST00000239165 GeneID:3217 KEGG:hsa:3217 UCSC:uc002inv.3
GeneCards:GC17M046684 HGNC:HGNC:5118 HPA:HPA049940 MIM:142962
neXtProt:NX_P09629 InParanoid:P09629 OMA:WMRSSGT PhylomeDB:P09629
GenomeRNAi:3217 NextBio:12800 ArrayExpress:P09629 Bgee:P09629
CleanEx:HS_HOXB7 Genevestigator:P09629 GermOnline:ENSG00000120087
Uniprot:P09629
Length = 217
Score = 159 (61.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 139 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKK 194
>UNIPROTKB|F1RWG2 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 KO:K09307 OMA:WMRSSGT
EMBL:CU856160 RefSeq:XP_003131597.1 UniGene:Ssc.22336
Ensembl:ENSSSCT00000019092 GeneID:100522513 KEGG:ssc:100522513
Uniprot:F1RWG2
Length = 217
Score = 159 (61.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 139 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 194
>MGI|MGI:96188 [details] [associations]
symbol:Hoxb7 "homeobox B7" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030099 "myeloid cell differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96188 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090 GO:GO:0090190
GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT EMBL:Y00436
EMBL:X06762 EMBL:AK136706 EMBL:AL645478 EMBL:M18167 EMBL:M18400
EMBL:X14570 IPI:IPI00132379 PIR:A26846 RefSeq:NP_034590.2
UniGene:Mm.390366 ProteinModelPortal:P09024 SMR:P09024
IntAct:P09024 MINT:MINT-1172508 STRING:P09024 PhosphoSite:P09024
PRIDE:P09024 DNASU:15415 Ensembl:ENSMUST00000049352 GeneID:15415
KEGG:mmu:15415 UCSC:uc007lbr.1 InParanoid:A2A9Z9 NextBio:288146
Bgee:P09024 CleanEx:MM_HOXB7 Genevestigator:P09024
GermOnline:ENSMUSG00000038721 Uniprot:P09024
Length = 217
Score = 159 (61.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 139 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKK 194
>UNIPROTKB|J9NVU3 [details] [associations]
symbol:DLX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104129 EMBL:AAEX03006532
Ensembl:ENSCAFT00000049011 OMA:KARTIYS Uniprot:J9NVU3
Length = 166
Score = 135 (52.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R +YSS Q+ L + F+ T YL R L+ +LGLT+ Q+KIWFQN+R K K+
Sbjct: 46 RTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKK 99
Score = 46 (21.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 9 PPGVSSEDSKTSPQNRKISPSKGVPSLLPMKDIR 42
PPG S DS+ P + + PS+ P P K +R
Sbjct: 13 PPGACSPDSEKPPLSPE--PSEQRPQA-PTKKLR 43
>UNIPROTKB|A5PJK3 [details] [associations]
symbol:HOXD10 "HOXD10 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0050905 "neuromuscular
process" evidence=IEA] [GO:0048935 "peripheral nervous system
neuron development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0035136 "forelimb morphogenesis" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 GO:GO:0048935 GO:GO:0007519
eggNOG:NOG248153 HOGENOM:HOG000231182 HOVERGEN:HBG052934 KO:K09295
GeneTree:ENSGT00700000104054 GO:GO:0021520 CTD:3236 OMA:NPRGSAK
OrthoDB:EOG4RV2RP EMBL:DAAA02004174 EMBL:BC142145 IPI:IPI00695000
RefSeq:NP_001092575.1 UniGene:Bt.24731 SMR:A5PJK3 STRING:A5PJK3
Ensembl:ENSBTAT00000021334 GeneID:540251 KEGG:bta:540251
InParanoid:A5PJK3 NextBio:20878518 Uniprot:A5PJK3
Length = 340
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>UNIPROTKB|P28358 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0035136 "forelimb morphogenesis"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0050905 GO:GO:0009954
GO:GO:0048704 GO:GO:0035136 GO:GO:0035137 GO:GO:0048935
GO:GO:0007519 HOGENOM:HOG000231182 HOVERGEN:HBG052934 KO:K09295
eggNOG:NOG241114 GO:GO:0021520 EMBL:X59373 EMBL:BC069619
EMBL:BC074760 IPI:IPI00292735 PIR:A42008 PIR:S18650
RefSeq:NP_002139.2 UniGene:Hs.123070 ProteinModelPortal:P28358
SMR:P28358 STRING:P28358 PhosphoSite:P28358 DMDM:143811403
PRIDE:P28358 DNASU:3236 Ensembl:ENST00000249501 GeneID:3236
KEGG:hsa:3236 UCSC:uc002ukj.3 CTD:3236 GeneCards:GC02P176945
HGNC:HGNC:5133 MIM:142984 MIM:192950 neXtProt:NX_P28358
Orphanet:295203 Orphanet:295201 PharmGKB:PA29407 InParanoid:P28358
OMA:NPRGSAK OrthoDB:EOG4RV2RP PhylomeDB:P28358 GenomeRNAi:3236
NextBio:12879 Bgee:P28358 CleanEx:HS_HOXD10 Genevestigator:P28358
GermOnline:ENSG00000128710 Uniprot:P28358
Length = 340
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>UNIPROTKB|F1RZG3 [details] [associations]
symbol:HOXD10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0035136 "forelimb morphogenesis" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 GO:GO:0048935 GO:GO:0007519 KO:K09295
GeneTree:ENSGT00700000104054 GO:GO:0021520 CTD:3236 OMA:NPRGSAK
EMBL:CU570829 RefSeq:XP_003133545.1 Ensembl:ENSSSCT00000017402
GeneID:100515344 KEGG:ssc:100515344 Uniprot:F1RZG3
Length = 340
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>MGI|MGI:96202 [details] [associations]
symbol:Hoxd10 "homeobox D10" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IGI] [GO:0008344 "adult locomotory behavior" evidence=IGI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0009954 "proximal/distal pattern formation"
evidence=IGI] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0035136 "forelimb morphogenesis"
evidence=IGI] [GO:0035137 "hindlimb morphogenesis" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048935
"peripheral nervous system neuron development" evidence=IGI]
[GO:0050905 "neuromuscular process" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96202 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0045944 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0050905
GO:GO:0009954 GO:GO:0048704 GO:GO:0035136 GO:GO:0035137
GO:GO:0048935 GO:GO:0007519 HOGENOM:HOG000231182 HOVERGEN:HBG052934
KO:K09295 GeneTree:ENSGT00700000104054 eggNOG:NOG241114
GO:GO:0021520 CTD:3236 OMA:NPRGSAK OrthoDB:EOG4RV2RP EMBL:X62669
EMBL:BC013463 EMBL:BC048690 EMBL:X14715 IPI:IPI00119646 PIR:S20879
RefSeq:NP_038582.2 UniGene:Mm.24420 ProteinModelPortal:P28359
SMR:P28359 IntAct:P28359 MINT:MINT-1172392 STRING:P28359
PhosphoSite:P28359 PRIDE:P28359 Ensembl:ENSMUST00000061745
GeneID:15430 KEGG:mmu:15430 InParanoid:P28359 NextBio:288190
Bgee:P28359 CleanEx:MM_HOXD10 Genevestigator:P28359
GermOnline:ENSMUSG00000050368 Uniprot:P28359
Length = 340
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>RGD|1306511 [details] [associations]
symbol:Hoxd10 "homeo box D10" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003677
"DNA binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0008344 "adult locomotory
behavior" evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA;ISO] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA;ISO] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA;ISO] [GO:0035136
"forelimb morphogenesis" evidence=IEA;ISO] [GO:0035137 "hindlimb
morphogenesis" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA;ISO] [GO:0050905 "neuromuscular process"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1306511 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 EMBL:CH473949 GO:GO:0048935
GO:GO:0007519 KO:K09295 GeneTree:ENSGT00700000104054 GO:GO:0021520
CTD:3236 OMA:NPRGSAK OrthoDB:EOG4RV2RP IPI:IPI00362602
RefSeq:NP_001100564.1 UniGene:Rn.12766 Ensembl:ENSRNOT00000002148
GeneID:303991 KEGG:rno:303991 UCSC:RGD:1306511 NextBio:652414
Uniprot:D4ACD8
Length = 340
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 259 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 318
Query: 376 MKLKR 380
MKLK+
Sbjct: 319 MKLKK 323
>UNIPROTKB|E2QUE0 [details] [associations]
symbol:HOXC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0001501 GO:GO:0050905 GO:GO:0009954
GO:GO:0019907 KO:K09295 GeneTree:ENSGT00700000104054 CTD:3226
OMA:CGVMRGC GO:GO:0021520 EMBL:AAEX03014974 RefSeq:XP_543626.3
Ensembl:ENSCAFT00000010694 GeneID:486500 KEGG:cfa:486500
NextBio:20860264 Uniprot:E2QUE0
Length = 342
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKR 380
MKLK+
Sbjct: 321 MKLKK 325
>MGI|MGI:96192 [details] [associations]
symbol:Hoxc10 "homeobox C10" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96192 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0001501
GO:GO:0050905 GO:GO:0009954 GO:GO:0019907 HOGENOM:HOG000231182
HOVERGEN:HBG052934 KO:K09295 GeneTree:ENSGT00700000104054 CTD:3226
eggNOG:NOG269631 OMA:CGVMRGC GO:GO:0021520 EMBL:X63507
EMBL:BC053405 EMBL:M81658 IPI:IPI00132257 PIR:A56552
RefSeq:NP_034592.2 UniGene:Mm.31665 ProteinModelPortal:P31257
SMR:P31257 STRING:P31257 PhosphoSite:P31257 PRIDE:P31257
Ensembl:ENSMUST00000001699 GeneID:209448 KEGG:mmu:209448
InParanoid:P31257 OrthoDB:EOG4F7NK9 NextBio:372673 Bgee:P31257
CleanEx:MM_HOXC10 Genevestigator:P31257
GermOnline:ENSMUSG00000022484 Uniprot:P31257
Length = 342
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKR 380
MKLK+
Sbjct: 321 MKLKK 325
>UNIPROTKB|G3V815 [details] [associations]
symbol:Hoxc10 "Homeo box C10, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1307250 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH474035 KO:K09295
GeneTree:ENSGT00700000104054 CTD:3226 OMA:CGVMRGC EMBL:AC116663
RefSeq:XP_003750462.1 RefSeq:XP_003754408.1
Ensembl:ENSRNOT00000021647 GeneID:315338 KEGG:rno:315338
Uniprot:G3V815
Length = 342
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKR 380
MKLK+
Sbjct: 321 MKLKK 325
>UNIPROTKB|P20822 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003677 "DNA binding"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CM000070 GenomeReviews:CM000070_GR eggNOG:NOG252841
EMBL:X05179 EMBL:U03179 PIR:A29259 RefSeq:XP_001359066.2
GeneID:4802074 KEGG:dpo:Dpse_GA10294 FlyBase:FBgn0243536
InParanoid:P20822 Uniprot:P20822
Length = 385
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/90 (45%), Positives = 55/90 (61%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 292 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 348
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSA 414
++ +KE +E +Q +A A +A
Sbjct: 349 --IQAIKELNEQEKQAQAQKAAAAAAAAAA 376
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 158 (60.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++R VY+ HQ +ELEKEF Y+ R+ L+ LGL+ERQ+KIWFQNRR K ++
Sbjct: 3 KYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERK 58
>UNIPROTKB|F1NZL8 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:AADN02056979 EMBL:AADN02056980
IPI:IPI00819365 Ensembl:ENSGALT00000038657 Uniprot:F1NZL8
Length = 153
Score = 158 (60.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 44/124 (35%), Positives = 59/124 (47%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R ++ Q+V LE +FR T YL R L+ L LTE Q+KIWFQNRR K K+ HP
Sbjct: 21 RARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQHPG 80
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIREHYERSAVPFPASQPGE 444
++ A A+ + + S P + P S+ +A PFP PG
Sbjct: 81 AD----GAAAPAPPAAARCS-PSPPRPAALPGQTFPSYAA--TSALFPAASPFPLGGPGG 133
Query: 445 HPLA 448
P A
Sbjct: 134 GPFA 137
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 158 (60.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGL+ERQ+KIWFQNRR K ++ +
Sbjct: 24 KYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKK 83
Query: 385 MVVEYVKESSEARSASQKTNHQSAP 409
+ + ++ S Q Q P
Sbjct: 84 KLQQQ-QQQPPPPSGPQPPQPQPGP 107
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 158 (60.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 2 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 52
>UNIPROTKB|Q6VPU7 [details] [associations]
symbol:Ubx "Ultrabithorax" species:7244 "Drosophila
virilis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 FlyBase:FBgn0013100 EMBL:AY333070 HSSP:P83949
ProteinModelPortal:Q6VPU7 SMR:Q6VPU7 STRING:Q6VPU7
InParanoid:Q6VPU7 Uniprot:Q6VPU7
Length = 387
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/90 (45%), Positives = 55/90 (61%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 294 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 350
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSA 414
++ +KE +E +Q +A A +A
Sbjct: 351 --IQAIKELNEQEKQAQAQKAAAAAAAAAA 378
>FB|FBgn0003944 [details] [associations]
symbol:Ubx "Ultrabithorax" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000980 "RNA polymerase
II distal enhancer sequence-specific DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS;TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0010092 "specification of organ identity" evidence=IMP]
[GO:0007482 "haltere development" evidence=IMP] [GO:0007494 "midgut
development" evidence=TAS] [GO:0007385 "specification of segmental
identity, abdomen" evidence=NAS] [GO:0007384 "specification of
segmental identity, thorax" evidence=IMP;NAS] [GO:0001706 "endoderm
formation" evidence=TAS] [GO:0007507 "heart development"
evidence=IEP;IMP] [GO:0007501 "mesodermal cell fate specification"
evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0035052 "dorsal vessel aortic cell fate
commitment" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007424 "open tracheal system development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045570 "regulation of imaginal disc growth"
evidence=IMP] [GO:0048636 "positive regulation of muscle organ
development" evidence=IMP] [GO:0001709 "cell fate determination"
evidence=IGI;IMP] [GO:0042694 "muscle cell fate specification"
evidence=IMP] [GO:0061327 "anterior Malpighian tubule development"
evidence=IMP] [GO:0060969 "negative regulation of gene silencing"
evidence=IDA] [GO:0042659 "regulation of cell fate specification"
evidence=IMP] [GO:0007525 "somatic muscle development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0042694 GO:GO:0048636 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:U31961 GeneTree:ENSGT00700000104090 KO:K09311 GO:GO:0005667
GO:GO:0007501 GO:GO:0007494 GO:GO:0000980 GO:GO:0000122
GO:GO:0007480 GO:GO:0007384 GO:GO:0001709 GO:GO:0007424
GO:GO:0045570 GO:GO:0061327 GO:GO:0001706 GO:GO:0010092
GO:GO:0007482 PDB:1B8I PDBsum:1B8I EMBL:X05723 EMBL:X05724
EMBL:X05725 EMBL:X05727 EMBL:X76210 EMBL:BT010241 EMBL:K01963
EMBL:K01959 EMBL:X05427 PIR:B27867 PIR:D26995 RefSeq:NP_536748.1
RefSeq:NP_536752.1 RefSeq:NP_732171.1 RefSeq:NP_732172.1
RefSeq:NP_732173.1 RefSeq:NP_996219.1 UniGene:Dm.21668
ProteinModelPortal:P83949 SMR:P83949 DIP:DIP-33048N IntAct:P83949
MINT:MINT-86744 STRING:P83949 PaxDb:P83949 PRIDE:P83949
EnsemblMetazoa:FBtr0083347 GeneID:42034 KEGG:dme:Dmel_CG10388
CTD:42034 FlyBase:FBgn0003944 eggNOG:NOG252841 InParanoid:P83949
OMA:WMAIAGK PhylomeDB:P83949 ChiTaRS:Ubx EvolutionaryTrace:P83949
GenomeRNAi:42034 NextBio:826845 Bgee:P83949 GermOnline:CG10388
GO:GO:0035052 GO:GO:0060969 Uniprot:P83949
Length = 389
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/90 (45%), Positives = 55/90 (61%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 297 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 353
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSA 414
++ +KE +E +Q +A A +A
Sbjct: 354 --IQAIKELNEQEKQAQAQKAAAAAAAAAA 381
>UNIPROTKB|P83950 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:7240
"Drosophila simulans" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AF099983 EMBL:AF099980 EMBL:AF099981 EMBL:AF099982
ProteinModelPortal:P83950 SMR:P83950 FlyBase:FBgn0014820
Uniprot:P83950
Length = 389
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/90 (45%), Positives = 55/90 (61%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 297 RGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE--- 353
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSA 414
++ +KE +E +Q +A A +A
Sbjct: 354 --IQAIKELNEQEKQAQAQKAAAAAAAAAA 381
>ZFIN|ZDB-GENE-990415-97 [details] [associations]
symbol:hoxa10b "homeo box A10b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-97 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG248153
HOGENOM:HOG000231182 HOVERGEN:HBG052934 KO:K09295 OrthoDB:EOG4VX26S
EMBL:AL645795 EMBL:DQ060538 EMBL:Y14527 IPI:IPI00510523
RefSeq:NP_571230.1 UniGene:Dr.75784 ProteinModelPortal:Q8AWY2
SMR:Q8AWY2 GeneID:30391 KEGG:dre:30391 CTD:30391 InParanoid:Q8AWY2
NextBio:20806803 ArrayExpress:Q8AWY2 Uniprot:Q8AWY2
Length = 330
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 40/102 (39%), Positives = 61/102 (59%)
Query: 288 KDIPSNLDLSQIPKPP--PSSSHTYS------NQIHKNLLQCNTGRFRQV-YSSHQIVEL 338
K++ + + P+PP P + T + ++ N L +GR ++ Y+ HQ +EL
Sbjct: 212 KELRGSTGTASSPEPPDSPEKAVTVTKAGDSKSESTANWLTAKSGRKKRCPYTKHQTLEL 271
Query: 339 EKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
EKEF YL +RR +S+ + LT+RQ+KIWFQNRRMKLK+
Sbjct: 272 EKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK 313
>UNIPROTKB|F1MJX6 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
Length = 253
Score = 164 (62.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 40/94 (42%), Positives = 52/94 (55%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ Q++ELEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 150 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK- 208
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTH 418
+ SS + SAS P T +P+ H
Sbjct: 209 -LPNTKMRSSNSGSAS--AGPPGKP-QTQSPHLH 238
Score = 43 (20.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 AGVSPPGVSSEDSKTSPQNRKISPSKGVPS 34
A SPPG+ ++ P +KI S PS
Sbjct: 113 ADKSPPGLKGKEPVVYPWMKKIHVSAVNPS 142
>UNIPROTKB|Q08DG7 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9913 "Bos
taurus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IEA]
[GO:0010159 "specification of organ position" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001974 GO:GO:0051216 GO:GO:0048538 GO:GO:0048645
GO:GO:0048704 GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 EMBL:BC123759 IPI:IPI00693889
RefSeq:NP_001070293.1 UniGene:Bt.87350 ProteinModelPortal:Q08DG7
SMR:Q08DG7 PRIDE:Q08DG7 Ensembl:ENSBTAT00000010700 GeneID:509991
KEGG:bta:509991 CTD:3200 InParanoid:Q08DG7 NextBio:20869233
GO:GO:0021615 Uniprot:Q08DG7
Length = 442
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 49/124 (39%), Positives = 67/124 (54%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 RTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIRE-HYERSAVPFP 438
+ D + + SS +S S+ +P P +++ S + YE + P P
Sbjct: 248 K---DQKGKGMLTSSGGQSPSR------SPVPPG-PGSYLNSMHSLVNSVPYEPQSPP-P 296
Query: 439 ASQP 442
S+P
Sbjct: 297 FSKP 300
>UNIPROTKB|F1RWG3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:CU856160
Ensembl:ENSSSCT00000019091 Uniprot:F1RWG3
Length = 253
Score = 170 (64.9 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 162 RGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 217
>UNIPROTKB|Q9YH13 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X94179
IPI:IPI00581117 RefSeq:NP_990224.1 UniGene:Gga.413
ProteinModelPortal:Q9YH13 SMR:Q9YH13 GeneID:395711 KEGG:gga:395711
CTD:3224 NextBio:20815781 Uniprot:Q9YH13
Length = 242
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>UNIPROTKB|E1BI54 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI
CTD:3224 EMBL:DAAA02012840 IPI:IPI00711888 RefSeq:XP_002687278.1
RefSeq:XP_002704291.1 ProteinModelPortal:E1BI54 SMR:E1BI54
Ensembl:ENSBTAT00000016117 GeneID:100295249 KEGG:bta:100295249
Uniprot:E1BI54
Length = 242
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>UNIPROTKB|E2QRS0 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Ensembl:ENSCAFT00000047496
NextBio:20892804 Uniprot:E2QRS0
Length = 242
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>UNIPROTKB|P31273 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 EMBL:CH471054 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V
KO:K09308 OMA:HHGTSSI CTD:3224 EMBL:AY014300 EMBL:AY014299
EMBL:AK290959 EMBL:BC053898 EMBL:X99680 EMBL:X99681 IPI:IPI00010756
PIR:S15534 RefSeq:NP_073149.1 UniGene:Hs.664500
ProteinModelPortal:P31273 SMR:P31273 DIP:DIP-52312N IntAct:P31273
MINT:MINT-2802457 STRING:P31273 PhosphoSite:P31273 DMDM:13124745
PRIDE:P31273 DNASU:3224 Ensembl:ENST00000040584 GeneID:3224
KEGG:hsa:3224 UCSC:uc001ser.3 GeneCards:GC12P054402 HGNC:HGNC:5129
HPA:HPA028911 MIM:142970 neXtProt:NX_P31273 PharmGKB:PA29404
InParanoid:P31273 PhylomeDB:P31273 ChiTaRS:HOXC8 GenomeRNAi:3224
NextBio:12831 Bgee:P31273 CleanEx:HS_HOXC8 Genevestigator:P31273
GermOnline:ENSG00000037965 Uniprot:P31273
Length = 242
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>MGI|MGI:96198 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96198 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 OMA:HHGTSSI CTD:3224
EMBL:X07439 EMBL:X07646 EMBL:M35603 EMBL:X03659 IPI:IPI00132381
PIR:B25180 PIR:B36023 PIR:S13785 RefSeq:NP_034596.1 UniGene:Mm.6167
ProteinModelPortal:P09025 SMR:P09025 IntAct:P09025 MINT:MINT-210049
STRING:P09025 PhosphoSite:P09025 PRIDE:P09025 DNASU:15426
Ensembl:ENSMUST00000001703 GeneID:15426 KEGG:mmu:15426
UCSC:uc012aaf.1 InParanoid:P09025 NextBio:288178 Bgee:P09025
CleanEx:MM_HOXC8 Genevestigator:P09025
GermOnline:ENSMUSG00000001657 Uniprot:P09025
Length = 242
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>RGD|2821 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA] [GO:0030182
"neuron differentiation" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2821 GO:GO:0005634 GO:GO:0030182 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976 GO:GO:0048705
GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI CTD:3224
UniGene:Rn.91646 EMBL:AC116663 IPI:IPI00919307 RefSeq:NP_001170797.2
ProteinModelPortal:F1MAK7 SMR:F1MAK7 Ensembl:ENSRNOT00000031404
GeneID:24460 KEGG:rno:24460 NextBio:744549 Uniprot:F1MAK7
Length = 242
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 206
>WB|WBGene00000584 [details] [associations]
symbol:cog-1 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0008406
"gonad development" evidence=IMP] [GO:0007389 "pattern
specification process" evidence=IMP] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0018991
GO:GO:0008406 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007368
GeneTree:ENSGT00680000099625 HSSP:P13297 EMBL:Z82279 EMBL:AY151209
PIR:T23866 RefSeq:NP_001022264.1 UniGene:Cel.20704
ProteinModelPortal:G5EGE2 SMR:G5EGE2 IntAct:G5EGE2
EnsemblMetazoa:R03C1.3a GeneID:175149 KEGG:cel:CELE_R03C1.3
CTD:175149 WormBase:R03C1.3a OMA:ASGDKSP NextBio:886968
Uniprot:G5EGE2
Length = 256
Score = 155 (59.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 299 IPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
+P P +S Q+ N L + R ++ HQI +LE++F T YL R L++
Sbjct: 145 LPSLSPMGRLQHSMQLSPNSLNMQKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQ 204
Query: 359 ELGLTERQIKIWFQNRRMKLKR 380
EL ++E Q+K+WFQNRR K ++
Sbjct: 205 ELNMSESQVKVWFQNRRTKWRK 226
Score = 55 (24.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 1 MLPRAGVSPPGVSSED-SKTSPQNRKISPSKGVPSLLPMKDIRTSDPDWPRPTASFAATI 59
+L + SP G SSED S +S + + SPS + P +S PT A +
Sbjct: 34 LLEKKESSPSGSSSEDDSASSNDDDQRSPSATSSFIFPPASSSSSSESATSPTQIMAQLM 93
Query: 60 AD 61
A+
Sbjct: 94 AN 95
>RGD|1561529 [details] [associations]
symbol:Cdx4 "caudal type homeo box 4" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA;ISO] [GO:0001890 "placenta development" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0060711 "labyrinthine layer development"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1561529 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000122 GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 KO:K09312
OrthoDB:EOG42FSK7 CTD:1046 OMA:FQPIEIQ EMBL:CH473969
IPI:IPI00202224 RefSeq:NP_001100412.1 UniGene:Rn.218668
Ensembl:ENSRNOT00000003973 GeneID:302400 KEGG:rno:302400
UCSC:RGD:1561529 NextBio:649569 Uniprot:D3ZF67
Length = 288
Score = 162 (62.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 35/100 (35%), Positives = 56/100 (56%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
++R VY+ HQ +ELEKEF Y+ R+ L+ LGL+ERQ+KIWFQNRR K ++
Sbjct: 179 KYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKK 238
Query: 385 MVVEYVKESSEARSASQKTNHQSAP-ADTSAPNTHMKSFE 423
+ ++ +S S + P A + P+ ++ F+
Sbjct: 239 KISQFENSGGSVQSDSGSISPGELPNAFFTTPSA-VRGFQ 277
Score = 51 (23.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 30/105 (28%), Positives = 42/105 (40%)
Query: 10 PGVSSEDSKTSPQNRKISPSKGVPSLL---PMKDIRTSDPDWPRPTASFAATI--ADVAT 64
P + + S SP S G S + PM D+ +S P + P S A A+
Sbjct: 67 PSLGAWSSPYSPPREDWSTYPGPSSTMGTVPMNDMTSSSPAFGSPDYSTLGPTGGAGGAS 126
Query: 65 K--TLP-VIQELLSQRDGKPVGKATLPSPLKAKLSDYENKMKNVR 106
+LP E L D G AT PS +++ S Y K V+
Sbjct: 127 NGGSLPDAASESLVSIDSGTSGGATSPS--RSRHSPYAWMRKTVQ 169
>UNIPROTKB|H0YJ33 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
Uniprot:H0YJ33
Length = 156
Score = 157 (60.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGL+ERQ+KIWFQNRR K ++
Sbjct: 31 KYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERK 86
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 157 (60.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 18 YTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKK 68
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 157 (60.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 18 YTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKK 68
>UNIPROTKB|O76762 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
Length = 308
Score = 174 (66.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 47/110 (42%), Positives = 62/110 (56%)
Query: 321 CNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
C R RQ Y+ Q +ELEKEF +YL RR ++ L LTERQIKIWFQNRRMKLK+
Sbjct: 136 CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 195
Query: 381 THPDMVVEYVKESSE-ARSASQKTNHQSAPADTSAPNTHMKSFEEFIREH 429
+ VKE +E AR ++ + + SA H S ++ +EH
Sbjct: 196 E-----LRAVKEINEQARREREEQDKMKNESLKSAQQHH--SQKQAQQEH 238
>ZFIN|ZDB-GENE-990415-112 [details] [associations]
symbol:hoxc4a "homeo box C4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
Uniprot:Q9PWM3
Length = 268
Score = 171 (65.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/95 (44%), Positives = 54/95 (56%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH-- 382
R R Y+ Q++ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+ H
Sbjct: 156 RSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKDHRL 215
Query: 383 PDMVVEYVKESSEARSASQKTNHQSAPADTSAPNT 417
P+ V SS + S +N SA +A +T
Sbjct: 216 PNTKVR----SSSSTGISSGSNTSSAAGVVAAAST 246
>UNIPROTKB|Q9NYD6 [details] [associations]
symbol:HOXC10 "Homeobox protein Hox-C10" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0001501
GO:GO:0050905 GO:GO:0009954 HOGENOM:HOG000231182 HOVERGEN:HBG052934
KO:K09295 EMBL:AF255675 EMBL:BC001293 EMBL:X99684 EMBL:X99685
IPI:IPI00020947 PIR:B60941 RefSeq:NP_059105.2 UniGene:Hs.44276
ProteinModelPortal:Q9NYD6 SMR:Q9NYD6 IntAct:Q9NYD6 STRING:Q9NYD6
PhosphoSite:Q9NYD6 DMDM:20141612 PRIDE:Q9NYD6 DNASU:3226
Ensembl:ENST00000303460 GeneID:3226 KEGG:hsa:3226 UCSC:uc001sen.3
CTD:3226 GeneCards:GC12P054378 HGNC:HGNC:5122 HPA:CAB046474
MIM:605560 neXtProt:NX_Q9NYD6 PharmGKB:PA29397 eggNOG:NOG269631
InParanoid:Q9NYD6 OMA:CGVMRGC PhylomeDB:Q9NYD6 GenomeRNAi:3226
NextBio:12839 ArrayExpress:Q9NYD6 Bgee:Q9NYD6 CleanEx:HS_HOXC10
Genevestigator:Q9NYD6 GermOnline:ENSG00000180818 GO:GO:0021520
Uniprot:Q9NYD6
Length = 342
Score = 177 (67.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 261 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRR 320
Query: 376 MKLKR 380
MKLK+
Sbjct: 321 MKLKK 325
Score = 38 (18.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 22/91 (24%), Positives = 29/91 (31%)
Query: 227 KHEQP-----RKESSYKETENTQFNSETNDLSKLEEPNKTSSILLAHLQQVQKXXXXXXX 281
+HE P R SY + T S ND E + + HL+ Q
Sbjct: 140 EHEVPVPSYYRASPSYSALDKTPHCSGANDFEAPFEQRASLNPRAEHLESPQLGGKVSFP 199
Query: 282 XXXXXEKDIPS--NLDLSQI---PKPPPSSS 307
+ PS + Q PK PS S
Sbjct: 200 ETPKSDSQTPSPNEIKTEQSLAGPKGSPSES 230
>ZFIN|ZDB-GENE-010108-2 [details] [associations]
symbol:vent "ventral expressed homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-010108-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009953 HSSP:P06602 GO:GO:0042661 eggNOG:NOG150160
GeneTree:ENSGT00610000086217 OrthoDB:EOG44TP97 EMBL:CABZ01072677
EMBL:AF255044 EMBL:AF277077 IPI:IPI00511939 RefSeq:NP_571775.1
UniGene:Dr.106743 STRING:Q9DGM9 Ensembl:ENSDART00000017456
GeneID:64810 KEGG:dre:64810 CTD:64810 HOGENOM:HOG000206355
InParanoid:Q9DGM9 OMA:RRMRTKF NextBio:20901999 Uniprot:Q9DGM9
Length = 170
Score = 141 (54.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 304 PSSSHTYSNQIHKNLLQCNTGRFRQV---YSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
P++S Y++ + + + G+ R+V ++ QI LEK F YL + +R+ ++++L
Sbjct: 43 PANSCGYTD-VESDDSEVEAGQNRRVRTKFTCDQISGLEKSFSKHRYLGATQRRKIAEKL 101
Query: 361 GLTERQIKIWFQNRRMKLKRTHPDM 385
L+E Q+K WFQNRRMKLKR DM
Sbjct: 102 HLSETQVKTWFQNRRMKLKREVQDM 126
Score = 37 (18.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 142 GKAPQFPCLYCSY 154
GKAP P C Y
Sbjct: 37 GKAPASPANSCGY 49
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 156 (60.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHP-DM 385
R +S QI LEK F T YL R L+ LG+TE Q+K+WFQNRR K ++ H +M
Sbjct: 27 RPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 86
Query: 386 VVEYVKESSEARSASQKTNHQ-----SAPADTSAPNTHMKSFEEFIREH 429
K SE + ++++ + P D PN+ + +++H
Sbjct: 87 ASAKKKHDSETEKLKESSDNEDDDEYNKPLD---PNSDDEKITRLLKKH 132
>UNIPROTKB|F1MU40 [details] [associations]
symbol:MNX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:DAAA02012151 IPI:IPI00695827
Ensembl:ENSBTAT00000006046 OMA:NGASAHT Uniprot:F1MU40
Length = 192
Score = 156 (60.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 38/83 (45%), Positives = 52/83 (62%)
Query: 299 IPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
+PK P +H YS Q NLL + R R ++ Q++ELE +F+L YL +R ++
Sbjct: 11 LPKMP---AH-YS-QAQSNLLG-KSRRPRTAFTKKQLLELEHQFKLNKYLSRPKRFEVAT 64
Query: 359 ELGLTERQIKIWFQNRRMKLKRT 381
L LTE Q+KIWFQNRRMK KR+
Sbjct: 65 SLMLTETQVKIWFQNRRMKWKRS 87
>ZFIN|ZDB-GENE-000329-2 [details] [associations]
symbol:hoxb7a "homeo box B7a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000329-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 eggNOG:NOG238660 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z EMBL:AL645782 EMBL:DQ060542 EMBL:Y14533
IPI:IPI00506071 RefSeq:NP_001108563.1 UniGene:Dr.75790
ProteinModelPortal:Q8AWY9 SMR:Q8AWY9 STRING:Q8AWY9 PRIDE:Q8AWY9
Ensembl:ENSDART00000078453 GeneID:58044 KEGG:dre:58044 CTD:58044
InParanoid:Q8AWY9 OMA:NNENNLR NextBio:20892308 ArrayExpress:Q8AWY9
Bgee:Q8AWY9 Uniprot:Q8AWY9
Length = 227
Score = 163 (62.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 147 RGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 202
>UNIPROTKB|D4ACE0 [details] [associations]
symbol:D4ACE0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
[GO:0035137 "hindlimb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
InterPro:IPR017112 PIRSF:PIRSF037109 IPI:IPI00949703
Ensembl:ENSRNOT00000002146 ArrayExpress:D4ACE0 Uniprot:D4ACE0
Length = 332
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 40/93 (43%), Positives = 56/93 (60%)
Query: 291 PSNLDLSQIPKPPPSS---SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNY 347
P + Q P+PP ++ +N IH +T + R Y+ +Q +ELEKEF Y
Sbjct: 234 PLKEEEKQPPQPPQQQLDPNNPAANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMY 289
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
L DRR +++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 290 LTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 322
>UNIPROTKB|D4A2V8 [details] [associations]
symbol:D4A2V8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
[GO:0035137 "hindlimb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0035115 GO:GO:0009954
GO:GO:0048704 GO:GO:0035137 GO:GO:0030879 GO:GO:0048935
GO:GO:0007519 GeneTree:ENSGT00700000104054 OrthoDB:EOG4D26QZ
InterPro:IPR017112 PIRSF:PIRSF037109 IPI:IPI00557981
Ensembl:ENSRNOT00000065426 ArrayExpress:D4A2V8 Uniprot:D4A2V8
Length = 336
Score = 174 (66.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 40/93 (43%), Positives = 56/93 (60%)
Query: 291 PSNLDLSQIPKPPPSS---SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNY 347
P + Q P+PP ++ +N IH +T + R Y+ +Q +ELEKEF Y
Sbjct: 238 PLKEEEKQPPQPPQQQLDPNNPAANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMY 293
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
L DRR +++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 294 LTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 326
>UNIPROTKB|P31274 [details] [associations]
symbol:HOXC9 "Homeobox protein Hox-C9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 EMBL:CH471054 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048704 PDB:2LP0 PDBsum:2LP0 HOVERGEN:HBG016849
InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294 EMBL:AY014302
EMBL:AY014301 EMBL:AK000445 EMBL:AK315194 EMBL:BC053894
IPI:IPI00644080 PIR:S15532 RefSeq:NP_008828.1 UniGene:Hs.658823
ProteinModelPortal:P31274 SMR:P31274 IntAct:P31274 STRING:P31274
DMDM:20141537 PRIDE:P31274 DNASU:3225 Ensembl:ENST00000303450
Ensembl:ENST00000508190 GeneID:3225 KEGG:hsa:3225 UCSC:uc001seq.3
CTD:3225 GeneCards:GC12P054388 HGNC:HGNC:5130 MIM:142971
neXtProt:NX_P31274 PharmGKB:PA29405 eggNOG:NOG288226
InParanoid:P31274 OMA:NNPVANW OrthoDB:EOG4SXNCJ PhylomeDB:P31274
GenomeRNAi:3225 NextBio:12835 Bgee:P31274 CleanEx:HS_HOXC9
Genevestigator:P31274 GermOnline:ENSG00000180806 Uniprot:P31274
Length = 260
Score = 169 (64.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 307 SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
S+ +N IH +T + R Y+ +Q +ELEKEF YL DRR +++ L LTERQ
Sbjct: 180 SNPVANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQ 235
Query: 367 IKIWFQNRRMKLKRTHPD 384
+KIWFQNRRMK+K+ + +
Sbjct: 236 VKIWFQNRRMKMKKMNKE 253
>MGI|MGI:96199 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96199
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 GeneTree:ENSGT00700000104054
HOVERGEN:HBG016849 HOGENOM:HOG000231180 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 EMBL:M35603 CTD:3225 eggNOG:NOG288226
OMA:NNPVANW OrthoDB:EOG4SXNCJ EMBL:X55318 EMBL:AK012173
EMBL:AK078758 EMBL:BC050838 EMBL:X07647 IPI:IPI00109000 PIR:A43821
RefSeq:NP_032298.1 UniGene:Mm.4765 ProteinModelPortal:P09633
SMR:P09633 IntAct:P09633 MINT:MINT-1172589 STRING:P09633
PRIDE:P09633 Ensembl:ENSMUST00000001706 GeneID:15427 KEGG:mmu:15427
UCSC:uc007xxa.1 InParanoid:P09633 NextBio:288182 Bgee:P09633
CleanEx:MM_HOXC9 Genevestigator:P09633
GermOnline:ENSMUSG00000036139 Uniprot:P09633
Length = 260
Score = 169 (64.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 307 SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
S+ +N IH +T + R Y+ +Q +ELEKEF YL DRR +++ L LTERQ
Sbjct: 180 SNPVANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQ 235
Query: 367 IKIWFQNRRMKLKRTHPD 384
+KIWFQNRRMK+K+ + +
Sbjct: 236 VKIWFQNRRMKMKKMNKE 253
>UNIPROTKB|O93353 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OrthoDB:EOG4K6G4J InterPro:IPR025281
Pfam:PF13293 CTD:3200 EMBL:AF067959 EMBL:AB111110 IPI:IPI00571086
RefSeq:NP_989879.1 RefSeq:XP_003640749.1 UniGene:Gga.48467
UniGene:Gga.49158 ProteinModelPortal:O93353 SMR:O93353
Ensembl:ENSGALT00000018005 GeneID:100858480 GeneID:395231
KEGG:gga:100858480 KEGG:gga:395231 InParanoid:O93353
NextBio:20815320 Uniprot:O93353
Length = 413
Score = 176 (67.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 50/139 (35%), Positives = 73/139 (52%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 170 QTSSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 229
Query: 380 RTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIRE-HYERSAVPFP 438
+ D + + SS +S S+ +P +A ++ S + YE + P P
Sbjct: 230 K---DQKGKGMMTSSGGQSPSR------SPVPPAAGG-YLNSMHSLVNSVPYEPQSPP-P 278
Query: 439 ASQPGEHPLATGELHGSPL 457
++P ++ + +PL
Sbjct: 279 FNKPHQNTYGIPASYTAPL 297
>RGD|1582908 [details] [associations]
symbol:Hoxd9 "homeo box D9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0035137
"hindlimb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1582908
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOVERGEN:HBG016849 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 CTD:3235 EMBL:BC169092 IPI:IPI00557981
RefSeq:NP_001166940.1 UniGene:Rn.224625 GeneID:688999
KEGG:rno:688999 NextBio:737693 Genevestigator:B5DFK3 Uniprot:B5DFK3
Length = 343
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 40/93 (43%), Positives = 56/93 (60%)
Query: 291 PSNLDLSQIPKPPPSS---SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNY 347
P + Q P+PP ++ +N IH +T + R Y+ +Q +ELEKEF Y
Sbjct: 245 PLKEEEKQPPQPPQQQLDPNNPAANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMY 300
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
L DRR +++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 301 LTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 333
>ZFIN|ZDB-GENE-000822-1 [details] [associations]
symbol:hoxc6b "homeo box C6b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-1 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:CABZ01085067 IPI:IPI00484929
Ensembl:ENSDART00000067698 OMA:EIANTLC ArrayExpress:F1RAL1
Bgee:F1RAL1 Uniprot:F1RAL1
Length = 228
Score = 163 (62.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 38/94 (40%), Positives = 54/94 (57%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ+YS +Q +ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 138 RGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE--S 195
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTH 418
+ + ++ A Q T+ + +T+ + H
Sbjct: 196 NLTSILNDNGSV-GAGQDTDKEET-GETAEKDEH 227
>ZFIN|ZDB-GENE-990415-106 [details] [associations]
symbol:hoxb6a "homeo box B6a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-106 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AL645782
EMBL:X68248 EMBL:X17267 EMBL:DQ060541 IPI:IPI00512770 PIR:S32563
RefSeq:NP_571194.1 UniGene:Dr.132967 ProteinModelPortal:P15861
SMR:P15861 GeneID:30341 KEGG:dre:30341 CTD:30341 InParanoid:P15861
OrthoDB:EOG4G7C0G NextBio:20806772 ArrayExpress:P15861
Uniprot:P15861
Length = 228
Score = 163 (62.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 322 NTGRF-RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
N GR RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 148 NAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 207
>UNIPROTKB|F1SHV7 [details] [associations]
symbol:MNX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060539 "diaphragm
development" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0021904 "dorsal/ventral neural tube
patterning" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0008045 GO:GO:0009791 GO:GO:0021675
GO:GO:0031018 GO:GO:0060539 GO:GO:0021904
GeneTree:ENSGT00660000095141 GO:GO:0021520 KO:K08025 OMA:YNSSDCS
EMBL:CU928638 RefSeq:XP_003134570.1 Ensembl:ENSSSCT00000017867
GeneID:100511165 KEGG:ssc:100511165 Uniprot:F1SHV7
Length = 404
Score = 163 (62.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 37/83 (44%), Positives = 51/83 (61%)
Query: 299 IPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
+PK P +S SN + K C R R ++S Q++ELE +F+L YL +R ++
Sbjct: 226 LPKMPDFNSQAQSNLLGK----CR--RPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVAT 279
Query: 359 ELGLTERQIKIWFQNRRMKLKRT 381
L LTE Q+KIWFQNRRMK KR+
Sbjct: 280 SLMLTETQVKIWFQNRRMKWKRS 302
Score = 56 (24.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 15/58 (25%), Positives = 22/58 (37%)
Query: 2 LPRAGVSPPGVSSEDSKTSPQNRKISPSKGVPSLLPMKDIRTSDPDWPRPTASFAATI 59
L A P G S + + + SP+ P P +R P PR A+ A +
Sbjct: 34 LAAAAAGPGGGGSGGAASGAASGSCSPASSEPPAAPADRLRAKSPSPPRLLAAHCALL 91
>UNIPROTKB|F6V4P2 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
OMA:NNPVANW EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Uniprot:F6V4P2
Length = 253
Score = 168 (64.2 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 196 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 249
>UNIPROTKB|F5H401 [details] [associations]
symbol:MNX1 "Motor neuron and pancreas homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC006357 UniGene:Hs.37035 DNASU:3110 GeneID:3110 KEGG:hsa:3110
CTD:3110 HGNC:HGNC:4979 KO:K08025 GenomeRNAi:3110 NextBio:12341
IPI:IPI00925104 RefSeq:NP_001158727.1 ProteinModelPortal:F5H401
SMR:F5H401 Ensembl:ENST00000543409 UCSC:uc003wnc.1
ArrayExpress:F5H401 Bgee:F5H401 Uniprot:F5H401
Length = 189
Score = 155 (59.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 313 QIHKNLL-QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWF 371
Q NLL +C R R ++S Q++ELE +F+L YL +R ++ L LTE Q+KIWF
Sbjct: 20 QAQSNLLGKCR--RPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWF 77
Query: 372 QNRRMKLKRT 381
QNRRMK KR+
Sbjct: 78 QNRRMKWKRS 87
>UNIPROTKB|F1N2F0 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048704 GeneTree:ENSGT00700000104054 InterPro:IPR017112
PIRSF:PIRSF037109 OMA:NNPVANW EMBL:DAAA02012841 IPI:IPI00698690
Ensembl:ENSBTAT00000007361 Uniprot:F1N2F0
Length = 263
Score = 169 (64.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 307 SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
S+ +N IH +T + R Y+ +Q +ELEKEF YL DRR +++ L LTERQ
Sbjct: 183 SNPVANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQ 238
Query: 367 IKIWFQNRRMKLKRTHPD 384
+KIWFQNRRMK+K+ + +
Sbjct: 239 VKIWFQNRRMKMKKMNKE 256
>ZFIN|ZDB-GENE-980526-532 [details] [associations]
symbol:hoxc3a "homeo box C3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-532
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 HOGENOM:HOG000252944 EMBL:BX005254
EMBL:BC095299 EMBL:BC165158 IPI:IPI00931602 UniGene:Dr.132202
UniGene:Dr.510 SMR:Q503K0 Ensembl:ENSDART00000082472
HOVERGEN:HBG096057 InParanoid:Q503K0 Uniprot:Q503K0
Length = 254
Score = 168 (64.2 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 44/113 (38%), Positives = 62/113 (54%)
Query: 305 SSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTE 364
S YSN + ++ R R ++S Q++ELEKEF + YL +RR +++ L LT+
Sbjct: 132 SGDSKYSNG-EAVVRNSSSKRARVAFTSSQLLELEKEFHFSAYLCRNRRLEMAELLKLTD 190
Query: 365 RQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNT 417
RQIKIWFQNRRMK K+ H KE S A+S+ ++ P S T
Sbjct: 191 RQIKIWFQNRRMKYKKDH--------KEKSTAKSSYTYLGTENQPLIISRSTT 235
>UNIPROTKB|F1RZG2 [details] [associations]
symbol:HOXD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0035115 GO:GO:0009954
GO:GO:0048704 GO:GO:0035137 GO:GO:0030879 GO:GO:0048935
GO:GO:0007519 GeneTree:ENSGT00700000104054 OMA:SGPEFSC
EMBL:CU570829 Ensembl:ENSSSCT00000017403 Uniprot:F1RZG2
Length = 353
Score = 174 (66.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 40/93 (43%), Positives = 56/93 (60%)
Query: 291 PSNLDLSQIPKPPPSS---SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNY 347
P + Q P+PP ++ +N IH +T + R Y+ +Q +ELEKEF Y
Sbjct: 255 PLKEEEKQHPQPPQQQLDPNNPAANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMY 310
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
L DRR +++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 311 LTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 343
>RGD|1559918 [details] [associations]
symbol:Hoxb7 "homeo box B7" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030099 "myeloid cell
differentiation" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1559918 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099
HOVERGEN:HBG016849 KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT
EMBL:BC079340 EMBL:M37566 IPI:IPI00195529 PIR:T10775
RefSeq:NP_001017480.1 UniGene:Rn.113631 ProteinModelPortal:P18864
SMR:P18864 PhosphoSite:P18864 Ensembl:ENSRNOT00000031035
GeneID:497985 KEGG:rno:497985 UCSC:RGD:1559918 InParanoid:P18864
NextBio:698299 Genevestigator:P18864 GermOnline:ENSRNOG00000007611
Uniprot:P18864
Length = 219
Score = 159 (61.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 139 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 194
>MGI|MGI:96171 [details] [associations]
symbol:Hoxa10 "homeobox A10" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI] [GO:0003677
"DNA binding" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0030326 "embryonic limb morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96171 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030326 GO:GO:0001501 GO:GO:0009954 CTD:3206 eggNOG:NOG248153
HOGENOM:HOG000231182 HOVERGEN:HBG052934 KO:K09295 OMA:CRMEPPD
EMBL:L08757 EMBL:L08758 EMBL:BC050839 EMBL:M81659 IPI:IPI00133247
IPI:IPI00228049 PIR:I49754 RefSeq:NP_001116422.1 RefSeq:NP_032289.2
UniGene:Mm.5 ProteinModelPortal:P31310 SMR:P31310 IntAct:P31310
MINT:MINT-1172417 STRING:P31310 PhosphoSite:P31310 PRIDE:P31310
Ensembl:ENSMUST00000121043 Ensembl:ENSMUST00000125581 GeneID:15395
KEGG:mmu:15395 UCSC:uc009bym.1 UCSC:uc012ema.1
GeneTree:ENSGT00700000104054 InParanoid:P31310 OrthoDB:EOG4VX26S
NextBio:288076 Bgee:P31310 CleanEx:MM_HOXA10 Genevestigator:P31310
GermOnline:ENSMUSG00000000938 Uniprot:P31310
Length = 416
Score = 172 (65.6 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 335 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 394
Query: 376 MKLKR 380
MKLK+
Sbjct: 395 MKLKK 399
Score = 46 (21.3 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 14 SEDSKTSPQNRKISPSKG 31
SE+SK SP+ + SKG
Sbjct: 313 SENSKASPEKDSLGSSKG 330
Score = 37 (18.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 20 SPQNRKISPSKGVPSLLPMKDIRTSDPDWPRP 51
+P++ ++ P G P P + P P P
Sbjct: 122 APRSCRMEPPDGPPPPQPQPQQQQQQPPPPPP 153
>ZFIN|ZDB-GENE-990415-114 [details] [associations]
symbol:hoxc8a "homeo box C8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0035118
"embryonic pectoral fin morphogenesis" evidence=IGI] [GO:0031017
"exocrine pancreas development" evidence=IGI] [GO:0031018
"endocrine pancreas development" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-114
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HSSP:P02833 HOGENOM:HOG000231181 GO:GO:0031018 GO:GO:0035118
GO:GO:0031017 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 EMBL:BX005254
EMBL:BC080255 EMBL:DQ060555 EMBL:Y14544 IPI:IPI00489401
RefSeq:NP_001005771.1 UniGene:Dr.132201 ProteinModelPortal:Q68EH7
SMR:Q68EH7 STRING:Q68EH7 Ensembl:ENSDART00000103139 GeneID:449648
KEGG:dre:449648 CTD:449648 InParanoid:A2BE64 OMA:HHGTSSI
NextBio:20832749 Bgee:Q68EH7 Uniprot:Q68EH7
Length = 250
Score = 167 (63.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 37/86 (43%), Positives = 53/86 (61%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR-THPDM 385
RQ YS +Q +ELEKEF YL RR +S L LTERQ+KIWFQNRRMK K+ + D
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKKENNKD- 211
Query: 386 VVEYVKESSEARSASQKTNHQSAPAD 411
++ + EA + +++ ++ A+
Sbjct: 212 --KFPGQRGEAEAEAEEEGNEDGEAE 235
>MGI|MGI:96210 [details] [associations]
symbol:Hoxd9 "homeobox D9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IGI]
[GO:0008344 "adult locomotory behavior" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0009954 "proximal/distal pattern formation" evidence=IGI;IMP]
[GO:0030879 "mammary gland development" evidence=IGI] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IGI;IMP] [GO:0035136
"forelimb morphogenesis" evidence=IGI] [GO:0035137 "hindlimb
morphogenesis" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development"
evidence=IGI;IMP] [GO:0048935 "peripheral nervous system neuron
development" evidence=IGI] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96210
GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG286554 GO:GO:0035115 GO:GO:0009954 GO:GO:0048704
GO:GO:0035137 GO:GO:0030879 GO:GO:0048935 GO:GO:0007519
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 OrthoDB:EOG4D26QZ InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 EMBL:X62669 EMBL:AL928644 CTD:3235
OMA:SGPEFSC EMBL:AK134427 EMBL:AK144746 EMBL:BC019150 EMBL:X14714
IPI:IPI00119641 PIR:S20880 RefSeq:NP_038583.1 UniGene:Mm.26544
ProteinModelPortal:P28357 SMR:P28357 STRING:P28357
PhosphoSite:P28357 PRIDE:P28357 Ensembl:ENSMUST00000059272
GeneID:15438 KEGG:mmu:15438 UCSC:uc008kdz.1 InParanoid:Q3UMQ3
NextBio:288218 Bgee:P28357 CleanEx:MM_HOXD9 Genevestigator:P28357
GermOnline:ENSMUSG00000043342 Uniprot:P28357
Length = 339
Score = 173 (66.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 298 QIPKPPPSS---SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRK 354
Q P+PP ++ +N IH +T + R Y+ +Q +ELEKEF YL DRR
Sbjct: 248 QPPQPPQQQLDPNNPAANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMYLTRDRRY 303
Query: 355 VLSKELGLTERQIKIWFQNRRMKLKR 380
+++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 304 EVARILNLTERQVKIWFQNRRMKMKK 329
>UNIPROTKB|F1M7G8 [details] [associations]
symbol:Cdx2 "Protein Cdx2" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:621234 GO:GO:0017053 GO:GO:0003714 GO:GO:0009952 GO:GO:0045597
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001829 GO:GO:0000794 GO:GO:0008333 GO:GO:0035019
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 GO:GO:0045197
IPI:IPI00192410 Ensembl:ENSRNOT00000048188 Uniprot:F1M7G8
Length = 239
Score = 165 (63.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 36/91 (39%), Positives = 54/91 (59%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGL+ERQ+KIWFQNRR K ++ +
Sbjct: 116 KYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKK 175
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAP 415
+ + ++ A Q + QS A S P
Sbjct: 176 KLQQQQQQQPPAPPPPQPSQPQSG-ALRSVP 205
>WB|WBGene00000436 [details] [associations]
symbol:ceh-12 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:FO080753 EMBL:X17076 PIR:S09504
PIR:T32764 RefSeq:NP_491693.1 UniGene:Cel.19039
ProteinModelPortal:P17487 SMR:P17487 EnsemblMetazoa:F33D11.4
GeneID:172255 KEGG:cel:CELE_F33D11.4 UCSC:F33D11.4 CTD:172255
WormBase:F33D11.4 eggNOG:NOG284589 HOGENOM:HOG000017276
InParanoid:P17487 NextBio:874695 Uniprot:P17487
Length = 180
Score = 154 (59.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R +SS Q+V+LEK+F YL RR L+++L L+E QIKIWFQNRRMK KR
Sbjct: 112 RPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR 167
>ZFIN|ZDB-GENE-000328-5 [details] [associations]
symbol:hoxc9a "homeo box C9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:2001213 "negative
regulation of vasculogenesis" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000328-5 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:BX005254 OMA:NNPVANW GO:GO:2001213 IPI:IPI00484007
UniGene:Dr.132199 SMR:A2BE65 Ensembl:ENSDART00000127384
InParanoid:A2BE65 Uniprot:A2BE65
Length = 270
Score = 166 (63.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 311 SNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIW 370
+N IH +T + R Y+ +Q +ELEKEF YL DRR +++ L LTERQ+KIW
Sbjct: 194 ANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIW 249
Query: 371 FQNRRMKLKRTHPD 384
FQNRRMK+K+ + +
Sbjct: 250 FQNRRMKMKKMNKE 263
Score = 40 (19.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 81 PVGKATLPSPLKAKLSDY 98
P+ ++ P+PL + +DY
Sbjct: 43 PISSSSRPTPLVPECADY 60
>UNIPROTKB|E1BAG4 [details] [associations]
symbol:HOXD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0007519
"skeletal muscle tissue development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0035115 GO:GO:0009954
GO:GO:0048704 GO:GO:0035137 GO:GO:0030879 GO:GO:0048935
GO:GO:0007519 GeneTree:ENSGT00700000104054 OMA:SGPEFSC
EMBL:DAAA02004174 IPI:IPI00706320 Ensembl:ENSBTAT00000021336
Uniprot:E1BAG4
Length = 354
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 297 SQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVL 356
SQ P+ ++ +N IH +T + R Y+ +Q +ELEKEF YL DRR +
Sbjct: 265 SQAPQQQLDPNNPAANWIHAR----STRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEV 320
Query: 357 SKELGLTERQIKIWFQNRRMKLKR 380
++ L LTERQ+KIWFQNRRMK+K+
Sbjct: 321 ARILNLTERQVKIWFQNRRMKMKK 344
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 168 (64.2 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 50/142 (35%), Positives = 66/142 (46%)
Query: 289 DIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYL 348
D PS+ Q P P + + ++ N R R Y+ Q++ELEKEF YL
Sbjct: 123 DHPSSAASKQ-PIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYL 181
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH--PDMVVEYVKESSEARSA-SQKTNH 405
RR ++ L L+ERQIKIWFQNRRMK K+ H P+ V + A S S T
Sbjct: 182 TRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPPAGAAPSTLSAATPG 241
Query: 406 QSAPADTSAPNTHMKSFEEFIR 427
S SA + E+ R
Sbjct: 242 TSEDHSQSATPPEQQRAEDITR 263
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 168 (64.2 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 50/142 (35%), Positives = 66/142 (46%)
Query: 289 DIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYL 348
D PS+ Q P P + + ++ N R R Y+ Q++ELEKEF YL
Sbjct: 123 DHPSSAASKQ-PIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYL 181
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH--PDMVVEYVKESSEARSA-SQKTNH 405
RR ++ L L+ERQIKIWFQNRRMK K+ H P+ V + A S S T
Sbjct: 182 TRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPPAGAAPSTLSAATPG 241
Query: 406 QSAPADTSAPNTHMKSFEEFIR 427
S SA + E+ R
Sbjct: 242 TSEDHSQSATPPEQQRAEDITR 263
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 168 (64.2 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 50/142 (35%), Positives = 66/142 (46%)
Query: 289 DIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYL 348
D PS+ Q P P + + ++ N R R Y+ Q++ELEKEF YL
Sbjct: 123 DHPSSAASKQ-PIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYL 181
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH--PDMVVEYVKESSEARSA-SQKTNH 405
RR ++ L L+ERQIKIWFQNRRMK K+ H P+ V + A S S T
Sbjct: 182 TRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPPAGAAPSTLSAATPG 241
Query: 406 QSAPADTSAPNTHMKSFEEFIR 427
S SA + E+ R
Sbjct: 242 TSEDHSQSATPPEQQRAEDITR 263
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 168 (64.2 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 50/142 (35%), Positives = 66/142 (46%)
Query: 289 DIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYL 348
D PS+ Q P P + + ++ N R R Y+ Q++ELEKEF YL
Sbjct: 123 DHPSSAASKQ-PIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYL 181
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH--PDMVVEYVKESSEARSA-SQKTNH 405
RR ++ L L+ERQIKIWFQNRRMK K+ H P+ V + A S S T
Sbjct: 182 TRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPPAGAAPSTLSAATPG 241
Query: 406 QSAPADTSAPNTHMKSFEEFIR 427
S SA + E+ R
Sbjct: 242 TSEDHSQSATPPEQQRAEDITR 263
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 168 (64.2 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 50/142 (35%), Positives = 66/142 (46%)
Query: 289 DIPSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYL 348
D PS+ Q P P + + ++ N R R Y+ Q++ELEKEF YL
Sbjct: 123 DHPSSAASKQ-PIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYL 181
Query: 349 PSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH--PDMVVEYVKESSEARSA-SQKTNH 405
RR ++ L L+ERQIKIWFQNRRMK K+ H P+ V + A S S T
Sbjct: 182 TRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPPAGAAPSTLSAATPG 241
Query: 406 QSAPADTSAPNTHMKSFEEFIR 427
S SA + E+ R
Sbjct: 242 TSEDHSQSATPPEQQRAEDITR 263
>UNIPROTKB|G3N0G1 [details] [associations]
symbol:HOXA10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326 GO:GO:0001501
GO:GO:0009954 GeneTree:ENSGT00700000104054 EMBL:DAAA02010938
EMBL:DAAA02010937 Ensembl:ENSBTAT00000063132 OMA:XPQATSC
Uniprot:G3N0G1
Length = 398
Score = 172 (65.6 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 317 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 376
Query: 376 MKLKR 380
MKLK+
Sbjct: 377 MKLKK 381
Score = 44 (20.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 14 SEDSKTSPQNRKISPSKG 31
SE SK SP+ + SKG
Sbjct: 295 SESSKASPEKDSLGNSKG 312
>MGI|MGI:96178 [details] [associations]
symbol:Hoxa6 "homeobox A6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96178 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 HOVERGEN:HBG016849 CTD:3203
KO:K09306 eggNOG:NOG305812 OMA:PEQQYKS OrthoDB:EOG4C5CKB
EMBL:AF247663 EMBL:M11988 IPI:IPI00132603 PIR:A24779
RefSeq:NP_034584.1 UniGene:Mm.222030 ProteinModelPortal:P09092
SMR:P09092 STRING:P09092 PhosphoSite:P09092 PRIDE:P09092
Ensembl:ENSMUST00000062829 GeneID:15403 KEGG:mmu:15403
InParanoid:P09092 NextBio:288106 Bgee:P09092 CleanEx:MM_HOXA6
Genevestigator:P09092 GermOnline:ENSMUSG00000043219 Uniprot:P09092
Length = 232
Score = 163 (62.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ +
Sbjct: 156 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKL 215
Query: 385 M-VVEYVKESSEARS 398
+ + E SEA++
Sbjct: 216 INSTQASGEDSEAKA 230
>UNIPROTKB|E2RHR1 [details] [associations]
symbol:HOXD10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0035136 "forelimb morphogenesis" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 GO:GO:0048935 GO:GO:0007519
GeneTree:ENSGT00700000104054 GO:GO:0021520 EMBL:AAEX03017786
ProteinModelPortal:E2RHR1 PRIDE:E2RHR1 Ensembl:ENSCAFT00000021329
OMA:CPVENSE NextBio:20861769 Uniprot:E2RHR1
Length = 410
Score = 177 (67.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +SK + LT+RQ+KIWFQNRR
Sbjct: 329 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRR 388
Query: 376 MKLKR 380
MKLK+
Sbjct: 389 MKLKK 393
Score = 39 (18.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 164 KHVTFKHAAYLDHFQ 178
+HVT + AA HFQ
Sbjct: 16 EHVTCEEAAAQGHFQ 30
>RGD|1590236 [details] [associations]
symbol:Hoxa6 "homeobox A6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISO] [GO:0048706 "embryonic skeletal system development"
evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1590236 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 CTD:3203
KO:K09306 OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:CH474011
EMBL:AC122669 RefSeq:NP_001178016.1 RefSeq:XP_003749802.1
RefSeq:XP_003752227.1 UniGene:Rn.213374 Ensembl:ENSRNOT00000008542
GeneID:100909604 GeneID:100911511 GeneID:685732 KEGG:rno:100909604
KEGG:rno:100911511 KEGG:rno:685732 NextBio:730342 Uniprot:G3V6T4
Length = 233
Score = 163 (62.4 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ +
Sbjct: 157 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKL 216
Query: 385 M-VVEYVKESSEARS 398
+ + E SEA++
Sbjct: 217 INSTQASGEDSEAKA 231
>WB|WBGene00003912 [details] [associations]
symbol:pal-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0010467 "gene expression"
evidence=IMP] [GO:0001712 "ectodermal cell fate commitment"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0009880 "embryonic pattern specification" evidence=IMP]
[GO:0042693 "muscle cell fate commitment" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0009792 GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003705 GeneTree:ENSGT00530000063388 GO:GO:0043065
GO:GO:0000794 GO:GO:0009880 GO:GO:0000977 GO:GO:0042693 EMBL:Z46241
GO:GO:0000777 eggNOG:NOG291290 KO:K09312 EMBL:X62782 EMBL:X57140
PIR:S15091 PIR:T19829 RefSeq:NP_001021209.1 RefSeq:NP_001021210.1
RefSeq:NP_001254921.1 ProteinModelPortal:P34766 SMR:P34766
IntAct:P34766 MINT:MINT-213983 STRING:P34766
EnsemblMetazoa:C38D4.6a.1 EnsemblMetazoa:C38D4.6a.2 GeneID:175638
KEGG:cel:CELE_C38D4.6 UCSC:C38D4.6a.2 CTD:175638 WormBase:C38D4.6a
HOGENOM:HOG000021335 InParanoid:P34766 OMA:DRRDKQK NextBio:889006
GO:GO:0001712 Uniprot:P34766
Length = 270
Score = 168 (64.2 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 33/56 (58%), Positives = 42/56 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++R VYS +Q +ELEKEF + ++ SDR+ LS L LTERQIKIWFQNRR K +R
Sbjct: 208 KYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKDRR 263
>UNIPROTKB|P34766 [details] [associations]
symbol:pal-1 "Homeobox protein pal-1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009792 GO:GO:0045944 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0003705 GeneTree:ENSGT00530000063388
GO:GO:0043065 GO:GO:0000794 GO:GO:0009880 GO:GO:0000977
GO:GO:0042693 EMBL:Z46241 GO:GO:0000777 eggNOG:NOG291290 KO:K09312
EMBL:X62782 EMBL:X57140 PIR:S15091 PIR:T19829 RefSeq:NP_001021209.1
RefSeq:NP_001021210.1 RefSeq:NP_001254921.1
ProteinModelPortal:P34766 SMR:P34766 IntAct:P34766 MINT:MINT-213983
STRING:P34766 EnsemblMetazoa:C38D4.6a.1 EnsemblMetazoa:C38D4.6a.2
GeneID:175638 KEGG:cel:CELE_C38D4.6 UCSC:C38D4.6a.2 CTD:175638
WormBase:C38D4.6a HOGENOM:HOG000021335 InParanoid:P34766
OMA:DRRDKQK NextBio:889006 GO:GO:0001712 Uniprot:P34766
Length = 270
Score = 168 (64.2 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 33/56 (58%), Positives = 42/56 (75%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++R VYS +Q +ELEKEF + ++ SDR+ LS L LTERQIKIWFQNRR K +R
Sbjct: 208 KYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKDRR 263
>UNIPROTKB|P31260 [details] [associations]
symbol:HOXA10 "Homeobox protein Hox-A10" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0009952
EMBL:CH471073 GO:GO:0043565 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326 GO:GO:0001501
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0009954
EMBL:AC004080 EMBL:X58430 EMBL:AF040714 EMBL:AK312450 EMBL:BC013971
EMBL:BC071843 EMBL:BC094807 EMBL:M30599 EMBL:S69027 EMBL:S69029
IPI:IPI00170686 IPI:IPI00941400 PIR:I65264 PIR:I65265 PIR:S26402
PIR:S28814 RefSeq:NP_061824.3 UniGene:Hs.110637 UniGene:Hs.659350
ProteinModelPortal:P31260 SMR:P31260 IntAct:P31260 STRING:P31260
PhosphoSite:P31260 DMDM:294862509 PRIDE:P31260 DNASU:3206
Ensembl:ENST00000283921 Ensembl:ENST00000396344 GeneID:3206
KEGG:hsa:3206 UCSC:uc011jzm.2 CTD:3206 GeneCards:GC07M027210
HGNC:HGNC:5100 HPA:CAB019384 MIM:142957 neXtProt:NX_P31260
PharmGKB:PA29377 eggNOG:NOG248153 HOGENOM:HOG000231182
HOVERGEN:HBG052934 InParanoid:P31260 KO:K09295 OMA:CRMEPPD
ChiTaRS:HOXA10 GenomeRNAi:3206 NextBio:12756 ArrayExpress:P31260
Bgee:P31260 CleanEx:HS_HOXA10 Genevestigator:P31260
GermOnline:ENSG00000153807 Uniprot:P31260
Length = 410
Score = 172 (65.6 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 329 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 388
Query: 376 MKLKR 380
MKLK+
Sbjct: 389 MKLKK 393
Score = 44 (20.5 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 14 SEDSKTSPQNRKISPSKG 31
SE SK SP+ + SKG
Sbjct: 307 SESSKASPEKDSLGNSKG 324
>UNIPROTKB|F1PZW4 [details] [associations]
symbol:HOXA10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
OMA:CRMEPPD GeneTree:ENSGT00700000104054 EMBL:AAEX03009390
Ensembl:ENSCAFT00000004748 Uniprot:F1PZW4
Length = 413
Score = 172 (65.6 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 332 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 376 MKLKR 380
MKLK+
Sbjct: 392 MKLKK 396
Score = 44 (20.5 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 14 SEDSKTSPQNRKISPSKG 31
SE SK SP+ + SKG
Sbjct: 310 SESSKASPEKDSLGNSKG 327
>UNIPROTKB|F1PZZ7 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:AAEX03009390 RefSeq:XP_539486.3
Ensembl:ENSCAFT00000004722 GeneID:482369 KEGG:cfa:482369
NextBio:20856981 Uniprot:F1PZZ7
Length = 317
Score = 167 (63.8 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 40/94 (42%), Positives = 52/94 (55%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ Q++ELEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 214 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK- 272
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTH 418
+ SS + SAS A T +P+ H
Sbjct: 273 -LPNTKMRSSNSASASAGP---PGKAQTQSPHLH 302
Score = 43 (20.2 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 AGVSPPGVSSEDSKTSPQNRKISPSKGVPS 34
A SPPG+ ++ P +KI S PS
Sbjct: 177 ADKSPPGLKGKEPVVYPWMKKIHVSAVNPS 206
>UNIPROTKB|O14627 [details] [associations]
symbol:CDX4 "Homeobox protein CDX-4" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0060711 "labyrinthine
layer development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001568
GO:GO:0000976 EMBL:CH471104 GO:GO:0060711 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:AF003530 EMBL:AF029879 EMBL:AF029877 EMBL:AF029878
EMBL:AL450108 EMBL:BC128233 IPI:IPI00023058 RefSeq:NP_005184.1
UniGene:Hs.553488 ProteinModelPortal:O14627 SMR:O14627
STRING:O14627 PhosphoSite:O14627 PRIDE:O14627
Ensembl:ENST00000373514 GeneID:1046 KEGG:hsa:1046 UCSC:uc011mqk.2
CTD:1046 GeneCards:GC0XP072583 HGNC:HGNC:1808 MIM:300025
neXtProt:NX_O14627 PharmGKB:PA26353 InParanoid:O14627 OMA:FQPIEIQ
PhylomeDB:O14627 GenomeRNAi:1046 NextBio:4385 Bgee:O14627
CleanEx:HS_CDX4 Genevestigator:O14627 GermOnline:ENSG00000131264
Uniprot:O14627
Length = 284
Score = 168 (64.2 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 35/93 (37%), Positives = 55/93 (59%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
++R VY+ HQ +ELEKEF Y+ R+ L+ LGL+ERQ+KIWFQNRR K ++
Sbjct: 175 KYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKERK---- 230
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNT 417
M+ + + + + + Q + +P + PNT
Sbjct: 231 MIKKKISQFENSGGSVQSDSDSISPGEL--PNT 261
>UNIPROTKB|P31267 [details] [associations]
symbol:HOXA6 "Homeobox protein Hox-A6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 EMBL:AC004080 HOVERGEN:HBG016849
CTD:3203 KO:K09306 EMBL:BC069497 EMBL:BC104915 EMBL:BC104917
IPI:IPI00010742 PIR:S15538 RefSeq:NP_076919.1 UniGene:Hs.679517
ProteinModelPortal:P31267 SMR:P31267 STRING:P31267
PhosphoSite:P31267 DMDM:17378385 PRIDE:P31267 DNASU:3203
Ensembl:ENST00000222728 GeneID:3203 KEGG:hsa:3203 UCSC:uc003syo.2
GeneCards:GC07M027185 HGNC:HGNC:5107 HPA:HPA004203 MIM:142951
neXtProt:NX_P31267 PharmGKB:PA29384 eggNOG:NOG305812
InParanoid:P31267 OMA:PEQQYKS OrthoDB:EOG4C5CKB PhylomeDB:P31267
GenomeRNAi:3203 NextBio:12744 Bgee:P31267 CleanEx:HS_HOXA6
Genevestigator:P31267 GermOnline:ENSG00000106006 Uniprot:P31267
Length = 233
Score = 162 (62.1 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ +
Sbjct: 157 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKL 216
Query: 385 M-VVEYVKESSEARS 398
+ + E SEA++
Sbjct: 217 INSTQPSGEDSEAKA 231
>UNIPROTKB|J9NWE8 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 EMBL:AAEX03009390
RefSeq:XP_864544.1 Ensembl:ENSCAFT00000046660 GeneID:482368
KEGG:cfa:482368 Uniprot:J9NWE8
Length = 442
Score = 173 (66.0 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 49/124 (39%), Positives = 66/124 (53%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 380 RTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIRE-HYERSAVPFP 438
+ D + + SS +S S+ +P A ++ S + YE + P P
Sbjct: 249 K---DQKGKGMLTSSGGQSPSR------SPVPPGAGG-YLNSMHSLVNSVPYEPQSPP-P 297
Query: 439 ASQP 442
S+P
Sbjct: 298 FSKP 301
>UNIPROTKB|F1NH11 [details] [associations]
symbol:HOXB1 "Homeobox protein Hox-B1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0021571
"rhombomere 5 development" evidence=IEA] [GO:0021612 "facial nerve
structural organization" evidence=IEA] [GO:0021754 "facial nucleus
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
OMA:YAICNRG EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
IPI:IPI01017071 Ensembl:ENSGALT00000021933 Uniprot:F1NH11
Length = 307
Score = 169 (64.5 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 44/125 (35%), Positives = 65/125 (52%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRK 354
D ++ + PP ++ + L Q NT R +++ Q+ ELEKEF YL RR
Sbjct: 188 DWMKVKRNPPKTAKVSEYGL---LGQPNT--IRTNFTTKQLTELEKEFHFNKYLTRARRV 242
Query: 355 VLSKELGLTERQIKIWFQNRRMKLKRTH-----PDMVVEYVKESSEARSASQKTNHQSAP 409
++ L L E Q+KIWFQNRRMK K+ P KE+SEA S T+ +++P
Sbjct: 243 EIAATLELNETQVKIWFQNRRMKQKKREKEGLAPPAASRSAKEASEASDQSNCTSPEASP 302
Query: 410 ADTSA 414
+ S+
Sbjct: 303 SSVSS 307
>UNIPROTKB|O43365 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010159 "specification of organ position"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0060017 "parathyroid gland development"
evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0008284 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878 eggNOG:NOG284589
EMBL:AC004079 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
OMA:HIQGSPV OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293
CTD:3200 GO:GO:0021615 EMBL:BC015180 IPI:IPI00012050
RefSeq:NP_109377.1 RefSeq:NP_705895.1 UniGene:Hs.659337
ProteinModelPortal:O43365 SMR:O43365 STRING:O43365
PhosphoSite:O43365 PaxDb:O43365 PRIDE:O43365 DNASU:3200
Ensembl:ENST00000317201 Ensembl:ENST00000396352 GeneID:3200
KEGG:hsa:3200 UCSC:uc003syk.3 GeneCards:GC07M027113 HGNC:HGNC:5104
HPA:HPA029157 MIM:142954 neXtProt:NX_O43365 PharmGKB:PA29381
InParanoid:O43365 PhylomeDB:O43365 GenomeRNAi:3200 NextBio:12728
ArrayExpress:O43365 Bgee:O43365 CleanEx:HS_HOXA3
Genevestigator:O43365 GermOnline:ENSG00000105997 Uniprot:O43365
Length = 443
Score = 173 (66.0 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 49/124 (39%), Positives = 66/124 (53%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 RTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIRE-HYERSAVPFP 438
+ D + + SS +S S+ +P A ++ S + YE + P P
Sbjct: 248 K---DQKGKGMLTSSGGQSPSR------SPVPPGAGG-YLNSMHSLVNSVPYEPQSPP-P 296
Query: 439 ASQP 442
S+P
Sbjct: 297 FSKP 300
>UNIPROTKB|F1SHT1 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0060017 "parathyroid gland
development" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
nerve morphogenesis" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0001974 "blood
vessel remodeling" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615
EMBL:CU570959 RefSeq:XP_003134890.1 Ensembl:ENSSSCT00000018186
GeneID:100519809 KEGG:ssc:100519809 Uniprot:F1SHT1
Length = 443
Score = 173 (66.0 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 49/124 (39%), Positives = 66/124 (53%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 380 RTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIRE-HYERSAVPFP 438
+ D + + SS +S S+ +P A ++ S + YE + P P
Sbjct: 248 K---DQKGKGMLTSSGGQSPSR------SPVPPGAGG-YLNSMHSLVNSVPYEPQSPP-P 296
Query: 439 ASQP 442
S+P
Sbjct: 297 FSKP 300
>MGI|MGI:96175 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10090 "Mus musculus"
[GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0010159 "specification of organ
position" evidence=IGI] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IGI;IMP] [GO:0030878 "thyroid gland
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI;IMP] [GO:0048645 "organ formation" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
[GO:0051216 "cartilage development" evidence=IGI] [GO:0060017
"parathyroid gland development" evidence=IGI] [GO:0071837 "HMG box
domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96175
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615 EMBL:Y11717
EMBL:BC096612 EMBL:U56399 EMBL:K02591 IPI:IPI00113737 PIR:I49746
RefSeq:NP_034582.1 UniGene:Mm.159945 UniGene:Mm.483277
ProteinModelPortal:P02831 SMR:P02831 STRING:P02831
PhosphoSite:P02831 PRIDE:P02831 Ensembl:ENSMUST00000114434
GeneID:15400 KEGG:mmu:15400 UCSC:uc009bya.2 InParanoid:P02831
NextBio:288094 Bgee:P02831 CleanEx:MM_HOXA3 Genevestigator:P02831
GermOnline:ENSMUSG00000059723 Uniprot:P02831
Length = 443
Score = 173 (66.0 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 49/124 (39%), Positives = 66/124 (53%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 380 RTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIRE-HYERSAVPFP 438
+ D + + SS +S S+ +P A ++ S + YE + P P
Sbjct: 249 K---DQKGKGMLTSSGGQSPSR------SPVPPGAGG-YLNSMHSLVNSVPYEPQSPP-P 297
Query: 439 ASQP 442
S+P
Sbjct: 298 FSKP 301
>RGD|1561431 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0001974 "blood vessel
remodeling" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0010159 "specification of organ
position" evidence=ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=ISO] [GO:0030878 "thyroid gland
development" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=ISO] [GO:0048645 "organ formation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051216 "cartilage development" evidence=ISO] [GO:0060017
"parathyroid gland development" evidence=ISO] [GO:0071837 "HMG box
domain binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1561431 GO:GO:0005634
GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001974 GO:GO:0051216 GO:GO:0048538
GO:GO:0048645 GO:GO:0048704 GO:GO:0010159 GO:GO:0060017
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293 CTD:3200
GO:GO:0021615 EMBL:CH474011 EMBL:AC122669 IPI:IPI00187912
RefSeq:XP_001058923.1 RefSeq:XP_003749795.1 RefSeq:XP_003752226.1
Ensembl:ENSRNOT00000008447 GeneID:100911474 GeneID:500125
KEGG:rno:100911474 KEGG:rno:500125 UCSC:RGD:1561431 NextBio:705172
Uniprot:D3ZM81
Length = 444
Score = 173 (66.0 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 49/124 (39%), Positives = 66/124 (53%)
Query: 320 QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLK 379
Q ++ R R Y+S Q+VELEKEF YL RR ++ L LTERQIKIWFQNRRMK K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 380 RTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHMKSFEEFIRE-HYERSAVPFP 438
+ D + + SS +S S+ +P A ++ S + YE + P P
Sbjct: 249 K---DQKGKGMLTSSGGQSPSR------SPVPPGAGG-YLNSMHSLVNSVPYEPQSPP-P 297
Query: 439 ASQP 442
S+P
Sbjct: 298 FSKP 301
>UNIPROTKB|P31259 [details] [associations]
symbol:HOXB1 "Homeobox protein Hox-B1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG321520
HOGENOM:HOG000247020 HOVERGEN:HBG006089 OrthoDB:EOG44F69X
EMBL:X68352 EMBL:X68353 IPI:IPI00584134 PIR:A60096 UniGene:Gga.533
ProteinModelPortal:P31259 SMR:P31259 STRING:P31259 PRIDE:P31259
InParanoid:P31259 NextBio:20815965 Uniprot:P31259
Length = 309
Score = 169 (64.5 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 44/125 (35%), Positives = 65/125 (52%)
Query: 295 DLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRK 354
D ++ + PP ++ + L Q NT R +++ Q+ ELEKEF YL RR
Sbjct: 190 DWMKVKRNPPKTAKVSEYGL---LGQPNT--IRTNFTTKQLTELEKEFHFNKYLTRARRV 244
Query: 355 VLSKELGLTERQIKIWFQNRRMKLKRTH-----PDMVVEYVKESSEARSASQKTNHQSAP 409
++ L L E Q+KIWFQNRRMK K+ P KE+SEA S T+ +++P
Sbjct: 245 EIAATLELNETQVKIWFQNRRMKQKKREKEGLAPPAASRSAKEASEASDQSNCTSPEASP 304
Query: 410 ADTSA 414
+ S+
Sbjct: 305 SSVSS 309
>FB|FBgn0001077 [details] [associations]
symbol:ftz "fushi tarazu" species:7227 "Drosophila
melanogaster" [GO:0007506 "gonadal mesoderm development"
evidence=IMP] [GO:0008354 "germ cell migration" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS;IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC;NAS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000980 "RNA
polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0007366 "periodic partitioning by pair rule gene"
evidence=NAS;TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0007350 "blastoderm segmentation" evidence=TAS]
[GO:0001708 "cell fate specification" evidence=TAS] [GO:0007417
"central nervous system development" evidence=TAS] [GO:0035289
"posterior head segmentation" evidence=TAS] [GO:0035290 "trunk
segmentation" evidence=TAS] [GO:0035282 "segmentation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0001708
GO:GO:0007417 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09311
GO:GO:0003705 GO:GO:0007506 GO:GO:0000980 GO:GO:0001077
GO:GO:0000122 GO:GO:0007366 EMBL:AE001572 GO:GO:0035289
GO:GO:0008354 GO:GO:0035290 PDB:2XHS PDBsum:2XHS EMBL:X00854
EMBL:BT022173 EMBL:X78905 EMBL:K01947 PIR:A93334 RefSeq:NP_477498.1
UniGene:Dm.24032 PDB:1FTZ PDBsum:1FTZ ProteinModelPortal:P02835
SMR:P02835 DIP:DIP-18500N IntAct:P02835 MINT:MINT-156974
STRING:P02835 EnsemblMetazoa:FBtr0081625 GeneID:40834
KEGG:dme:Dmel_CG2047 CTD:40834 FlyBase:FBgn0001077 eggNOG:NOG249057
InParanoid:P02835 OMA:NRYITRR OrthoDB:EOG44TMQT PhylomeDB:P02835
EvolutionaryTrace:P02835 GenomeRNAi:40834 NextBio:820846
Bgee:P02835 GermOnline:CG2047 InterPro:IPR005567 Pfam:PF03867
Uniprot:P02835
Length = 410
Score = 172 (65.6 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 53/168 (31%), Positives = 85/168 (50%)
Query: 304 PSSSHTYS-NQIHKNLLQ-C-NTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
P+ + ++ + I + L C ++ R RQ Y+ +Q +ELEKEF Y+ RR ++ L
Sbjct: 232 PNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANAL 291
Query: 361 GLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEAR-SASQKTNHQSAPADTSAPNTHM 419
L+ERQIKIWFQNRRMK K+ D ++ E A +A ++ A T AP+ +
Sbjct: 292 SLSERQIKIWFQNRRMKSKK---DRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPV 348
Query: 420 KSFEEFIREHYERSAVPFPASQPGEHPLATGELHGSPLEMQTLMEENA 467
+ H+ ++ +PA H G L+ P + QT + +A
Sbjct: 349 PMY------HHHQTTAAYPAYSHS-HSHGYGLLNDYP-QQQTHQQYDA 388
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 151 (58.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R Y+ +Q +ELEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 9 RARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 64
>UNIPROTKB|Q02814 [details] [associations]
symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
Length = 60
Score = 151 (58.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++R VY+ HQ +ELEKEF Y+ R+ L+ LGL+ERQ+K WFQNRR K ++
Sbjct: 3 KYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAKERK 58
>UNIPROTKB|Q5YLH5 [details] [associations]
symbol:HOXA6 "Homeobox protein Hox-A6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG238660 HOVERGEN:HBG016849 EMBL:AY307380
IPI:IPI00598309 RefSeq:NP_001026158.1 RefSeq:XP_003640784.1
UniGene:Gga.22376 ProteinModelPortal:Q5YLH5 SMR:Q5YLH5
GeneID:100857163 GeneID:420630 KEGG:gga:100857163 KEGG:gga:420630
CTD:3203 KO:K09306 NextBio:20823516 Uniprot:Q5YLH5
Length = 231
Score = 161 (61.7 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 155 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 210
>ZFIN|ZDB-GENE-980526-330 [details] [associations]
symbol:cdx4 "caudal type homeo box transcription
factor 4" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IGI] [GO:0009952 "anterior/posterior
pattern specification" evidence=IGI;IMP] [GO:0048793 "pronephros
development" evidence=IGI;IMP] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IGI] [GO:0031016 "pancreas development"
evidence=IGI;IMP] [GO:0048617 "embryonic foregut morphogenesis"
evidence=IMP] [GO:0021906 "hindbrain-spinal cord boundary
formation" evidence=IMP] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IGI] [GO:0009948 "anterior/posterior axis
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-330
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GO:GO:0001756 GO:GO:0030097 GO:GO:0031016 GO:GO:0048384
GO:GO:0000976 GO:GO:0009948 GO:GO:0048617 GO:GO:0048793
HOGENOM:HOG000115975 HOVERGEN:HBG005302 GO:GO:0021906 EMBL:X66958
IPI:IPI00489697 PIR:S25706 UniGene:Dr.11836
ProteinModelPortal:Q90262 SMR:Q90262 InParanoid:Q90262
NextBio:20933345 ArrayExpress:Q90262 Uniprot:Q90262
Length = 300
Score = 168 (64.2 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 37/96 (38%), Positives = 57/96 (59%)
Query: 291 PSNLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGR------FRQVYSSHQIVELEKEFRL 344
P N+ ++Q+ P ++Y + K + +TG+ +R VY+ HQ +ELEKEF
Sbjct: 115 PENIPVAQL-SPERERRNSYQ-WMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHF 172
Query: 345 TNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
Y+ R+ L+ LGL+ERQ+KIWFQNRR K ++
Sbjct: 173 NRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERK 208
>UNIPROTKB|E1BIU9 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706
GO:GO:0030879 GeneTree:ENSGT00700000104054 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 CTD:3219 OMA:CSFQPKP EMBL:DAAA02049060
IPI:IPI00712637 RefSeq:NP_001178115.1 UniGene:Bt.69910 PRIDE:E1BIU9
Ensembl:ENSBTAT00000034888 GeneID:783873 KEGG:bta:783873
NextBio:20926355 Uniprot:E1BIU9
Length = 250
Score = 164 (62.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
K P ++ +N +H ++ + R Y+ +Q +ELEKEF YL DRR +++ L
Sbjct: 167 KERPDQTNPSANWLHAR----SSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLL 222
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
L+ERQ+KIWFQNRRMK+K+ + +
Sbjct: 223 NLSERQVKIWFQNRRMKMKKMNKE 246
>UNIPROTKB|E2RQ11 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060326
"cell chemotaxis" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048706 "embryonic skeletal
system development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005739
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060326 GO:GO:0060070
GO:GO:0048706 GO:GO:0030879 GeneTree:ENSGT00700000104054
InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294 CTD:3219 OMA:CSFQPKP
EMBL:AAEX03006516 RefSeq:XP_864745.2 ProteinModelPortal:E2RQ11
Ensembl:ENSCAFT00000026702 GeneID:608958 KEGG:cfa:608958
NextBio:20894578 Uniprot:E2RQ11
Length = 250
Score = 164 (62.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
K P ++ +N +H ++ + R Y+ +Q +ELEKEF YL DRR +++ L
Sbjct: 167 KERPDQTNPSANWLHAR----SSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLL 222
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
L+ERQ+KIWFQNRRMK+K+ + +
Sbjct: 223 NLSERQVKIWFQNRRMKMKKMNKE 246
>UNIPROTKB|P17482 [details] [associations]
symbol:HOXB9 "Homeobox protein Hox-B9" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA;NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0060326 "cell chemotaxis"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005739 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0060326 GO:GO:0060070 GO:GO:0048706 GO:GO:0030879
HOVERGEN:HBG016849 HOGENOM:HOG000231180 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 EMBL:AY014296 EMBL:AY014295
EMBL:AK315480 EMBL:BC015565 EMBL:X16172 IPI:IPI00014539 PIR:A37042
RefSeq:NP_076922.1 UniGene:Hs.463350 ProteinModelPortal:P17482
SMR:P17482 IntAct:P17482 MINT:MINT-118223 STRING:P17482
PhosphoSite:P17482 DMDM:20141507 PaxDb:P17482 PRIDE:P17482
Ensembl:ENST00000311177 GeneID:3219 KEGG:hsa:3219 UCSC:uc002inx.3
CTD:3219 GeneCards:GC17M046694 HGNC:HGNC:5120 HPA:HPA031463
MIM:142964 neXtProt:NX_P17482 PharmGKB:PA29396 eggNOG:NOG325913
InParanoid:P17482 OMA:CSFQPKP OrthoDB:EOG4DZ1VZ PhylomeDB:P17482
GenomeRNAi:3219 NextBio:12808 ArrayExpress:P17482 Bgee:P17482
CleanEx:HS_HOXB9 Genevestigator:P17482 GermOnline:ENSG00000170689
Uniprot:P17482
Length = 250
Score = 164 (62.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
K P ++ +N +H ++ + R Y+ +Q +ELEKEF YL DRR +++ L
Sbjct: 167 KERPDQTNPSANWLHAR----SSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLL 222
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
L+ERQ+KIWFQNRRMK+K+ + +
Sbjct: 223 NLSERQVKIWFQNRRMKMKKMNKE 246
>MGI|MGI:96190 [details] [associations]
symbol:Hoxb9 "homeobox B9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030879 "mammary gland development"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0048706
"embryonic skeletal system development" evidence=IGI;IMP]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO] [GO:0060326 "cell chemotaxis" evidence=ISO]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96190 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:CH466556 GO:GO:0048706 GO:GO:0030879
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294
EMBL:AL645478 CTD:3219 eggNOG:NOG325913 OMA:CSFQPKP
OrthoDB:EOG4DZ1VZ EMBL:S66855 EMBL:X64316 EMBL:M34857
IPI:IPI00121375 IPI:IPI00828552 PIR:A56572 RefSeq:NP_032296.2
UniGene:Mm.258271 ProteinModelPortal:P20615 STRING:P20615
PhosphoSite:P20615 PRIDE:P20615 Ensembl:ENSMUST00000000010
GeneID:15417 KEGG:mmu:15417 InParanoid:P20615 NextBio:288154
CleanEx:MM_HOXB9 Genevestigator:P20615
GermOnline:ENSMUSG00000020875 Uniprot:P20615
Length = 250
Score = 164 (62.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
K P ++ +N +H ++ + R Y+ +Q +ELEKEF YL DRR +++ L
Sbjct: 167 KERPDQTNPSANWLHAR----SSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLL 222
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
L+ERQ+KIWFQNRRMK+K+ + +
Sbjct: 223 NLSERQVKIWFQNRRMKMKKMNKE 246
>RGD|1306158 [details] [associations]
symbol:Hoxb9 "homeo box B9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0030879 "mammary gland development" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0048706 "embryonic
skeletal system development" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0060326 "cell chemotaxis" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1306158
GO:GO:0005739 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060326
EMBL:CH473948 GO:GO:0060070 GO:GO:0048706 GO:GO:0030879
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
KO:K09294 CTD:3219 OMA:CSFQPKP OrthoDB:EOG4DZ1VZ IPI:IPI00195907
RefSeq:NP_001093967.1 UniGene:Rn.198320 SMR:D3ZW24
Ensembl:ENSRNOT00000009951 GeneID:287647 KEGG:rno:287647
UCSC:RGD:1306158 Uniprot:D3ZW24
Length = 250
Score = 164 (62.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKEL 360
K P ++ +N +H ++ + R Y+ +Q +ELEKEF YL DRR +++ L
Sbjct: 167 KERPDQTNPSANWLHAR----SSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLL 222
Query: 361 GLTERQIKIWFQNRRMKLKRTHPD 384
L+ERQ+KIWFQNRRMK+K+ + +
Sbjct: 223 NLSERQVKIWFQNRRMKMKKMNKE 246
>UNIPROTKB|E2QT40 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09306 CTD:3216 RefSeq:XP_003435306.1
ProteinModelPortal:E2QT40 Ensembl:ENSCAFT00000026682 GeneID:491056
KEGG:cfa:491056 NextBio:20863955 Uniprot:E2QT40
Length = 224
Score = 159 (61.0 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 148 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 203
>UNIPROTKB|P17509 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0034101 "erythrocyte homeostasis" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0048704 GO:GO:0034101
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AF287967
OrthoDB:EOG4G7C0G EMBL:X58431 EMBL:AJ270993 EMBL:AK292200
EMBL:BC014651 EMBL:M30597 EMBL:K02571 IPI:IPI00015075
IPI:IPI00216597 PIR:A05266 PIR:S26400 RefSeq:NP_061825.2
UniGene:Hs.98428 ProteinModelPortal:P17509 SMR:P17509 IntAct:P17509
MINT:MINT-1437085 STRING:P17509 PhosphoSite:P17509 DMDM:116242515
PRIDE:P17509 DNASU:3216 Ensembl:ENST00000225648
Ensembl:ENST00000484302 GeneID:3216 KEGG:hsa:3216 UCSC:uc002ins.1
UCSC:uc002int.1 CTD:3216 GeneCards:GC17M046673 HGNC:HGNC:5117
HPA:HPA042063 MIM:142961 neXtProt:NX_P17509 PharmGKB:PA29393
InParanoid:P17509 OMA:AEGSCAF PhylomeDB:P17509 GenomeRNAi:3216
NextBio:12796 Bgee:P17509 CleanEx:HS_HOXB6 Genevestigator:P17509
GermOnline:ENSG00000108511 Uniprot:P17509
Length = 224
Score = 159 (61.0 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 148 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 203
>UNIPROTKB|F1RWG1 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0034101
"erythrocyte homeostasis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0034101
KO:K09306 OMA:AEGSCAF GeneTree:ENSGT00700000104332 EMBL:CU856160
RefSeq:XP_003358123.1 Ensembl:ENSSSCT00000019093 GeneID:100627849
KEGG:ssc:100627849 Uniprot:F1RWG1
Length = 224
Score = 159 (61.0 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 148 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 203
>MGI|MGI:96187 [details] [associations]
symbol:Hoxb6 "homeobox B6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0034101 "erythrocyte homeostasis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI] [GO:0048706 "embryonic skeletal system development"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96187 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0034101 HOVERGEN:HBG016849
KO:K09306 eggNOG:NOG305812 OrthoDB:EOG4G7C0G CTD:3216 EMBL:M18166
EMBL:X56459 EMBL:BC016893 EMBL:M18401 EMBL:J03782 IPI:IPI00132375
PIR:A31324 PIR:B29585 PIR:C27176 RefSeq:NP_032295.1 UniGene:Mm.215
ProteinModelPortal:P09023 SMR:P09023 DIP:DIP-59870N STRING:P09023
PhosphoSite:P09023 PaxDb:P09023 PRIDE:P09023
Ensembl:ENSMUST00000000704 Ensembl:ENSMUST00000173432 GeneID:15414
KEGG:mmu:15414 GeneTree:ENSGT00700000104332 InParanoid:P09023
OMA:FVNSSFP NextBio:288142 Bgee:P09023 CleanEx:MM_HOXB6
Genevestigator:P09023 GermOnline:ENSMUSG00000000690 Uniprot:P09023
Length = 224
Score = 159 (61.0 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 148 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 203
>RGD|1562142 [details] [associations]
symbol:Hoxb6 "homeo box B6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0034101 "erythrocyte homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1562142 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
EMBL:CH473948 GO:GO:0034101 KO:K09306 OrthoDB:EOG4G7C0G CTD:3216
GeneTree:ENSGT00700000104332 OMA:FVNSSFP IPI:IPI00196016
RefSeq:XP_003752419.1 RefSeq:XP_573182.1 SMR:D3ZLU8
Ensembl:ENSRNOT00000010527 GeneID:497986 KEGG:rno:497986
UCSC:RGD:1562142 NextBio:698302 Uniprot:D3ZLU8
Length = 224
Score = 159 (61.0 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 148 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 203
>UNIPROTKB|E2R5W2 [details] [associations]
symbol:HOXA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 CTD:3203 KO:K09306
OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:AAEX03009390
RefSeq:XP_854141.1 ProteinModelPortal:E2R5W2
Ensembl:ENSCAFT00000004729 GeneID:611383 KEGG:cfa:611383
NextBio:20896920 Uniprot:E2R5W2
Length = 233
Score = 161 (61.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 157 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 212
>UNIPROTKB|F1SHT3 [details] [associations]
symbol:HOXA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 KO:K09306 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:CU570959 RefSeq:XP_003134887.1
Ensembl:ENSSSCT00000018183 GeneID:100519284 KEGG:ssc:100519284
Uniprot:F1SHT3
Length = 233
Score = 161 (61.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 157 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 212
>ZFIN|ZDB-GENE-000823-8 [details] [associations]
symbol:hoxa11a "homeo box A11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-8
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG286554 HOGENOM:HOG000231898
HOVERGEN:HBG052048 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:CR382300 EMBL:AF071240 EMBL:AF287138
IPI:IPI00484931 RefSeq:NP_571619.1 UniGene:Dr.85394
ProteinModelPortal:Q9DDU0 SMR:Q9DDU0 GeneID:58061 KEGG:dre:58061
CTD:58061 NextBio:20892323 ArrayExpress:Q9DDU0 Uniprot:Q9DDU0
Length = 284
Score = 164 (62.8 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 38/93 (40%), Positives = 56/93 (60%)
Query: 301 KPPPSSSHTYSNQIHKNLLQCNTG-RFRQV---YSSHQIVELEKEFRLTNYLPSDRRKVL 356
+P SS + S + N+G RFR+ Y+ QI ELE+EF + Y+ ++R L
Sbjct: 186 RPETSSPESSSGNNEEKTSGANSGPRFRKKRCPYTKFQIRELEREFFFSVYINKEKRLQL 245
Query: 357 SKELGLTERQIKIWFQNRRMKLKRTHPDMVVEY 389
S+ L LT+RQ+K+WFQNRRMK K+ + D + Y
Sbjct: 246 SRMLNLTDRQVKMWFQNRRMKEKKLNRDRLQYY 278
Score = 41 (19.5 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 166 VTFKHAAYLDHFQAVQEELEVTTKELSPGPKAENRHR 202
VT+ +A+ L Q V+E VT ++ + P + HR
Sbjct: 44 VTYSYASNLPQVQHVRE---VTFRDYAIDPSTKWPHR 77
>ZFIN|ZDB-GENE-990415-121 [details] [associations]
symbol:hoxd9a "homeo box D9a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-121 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294
EMBL:AF071268 EMBL:BC056695 EMBL:DQ060566 EMBL:Y14536
IPI:IPI00504959 RefSeq:NP_571201.3 UniGene:Dr.75792
ProteinModelPortal:Q9PWM6 SMR:Q9PWM6 Ensembl:ENSDART00000082354
GeneID:30350 KEGG:dre:30350 CTD:30350 InParanoid:Q9PWM6 OMA:WSSVHPQ
OrthoDB:EOG4MPHRC NextBio:20806778 Bgee:Q9PWM6 Uniprot:Q9PWM6
Length = 262
Score = 165 (63.1 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 307 SHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQ 366
S+ +N IH +T + R Y+ +Q +ELEKEF YL DRR +++ L LTERQ
Sbjct: 183 SNPAANWIHAR----STRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQ 238
Query: 367 IKIWFQNRRMKLKR 380
+KIWFQNRRMK+K+
Sbjct: 239 VKIWFQNRRMKMKK 252
>UNIPROTKB|E1BHR6 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222
OMA:CYSGLDL EMBL:DAAA02012839 IPI:IPI00694608 RefSeq:NP_001178280.1
UniGene:Bt.93629 Ensembl:ENSBTAT00000012696 GeneID:100140629
KEGG:bta:100140629 NextBio:20790992 Uniprot:E1BHR6
Length = 222
Score = 158 (60.7 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 37/85 (43%), Positives = 50/85 (58%)
Query: 296 LSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKV 355
LSQ P P + + ++H + + + R R Y+ +Q +ELEKEF YL RR
Sbjct: 131 LSQPPAAP--QIYPWMTKLHMSH-ETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 356 LSKELGLTERQIKIWFQNRRMKLKR 380
++ L L ERQIKIWFQNRRMK K+
Sbjct: 188 IANNLCLNERQIKIWFQNRRMKWKK 212
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 150 (57.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
++R VY+ HQ +ELEKEF Y+ R+ L+ L L+ERQ+KIWFQNRR K ++
Sbjct: 3 KYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKERK 58
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 150 (57.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 330 YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
Y+ +QI ELE+EF Y+ ++R LS+ L LT+RQ+KIWFQNRRMK K+ + D
Sbjct: 44 YTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNRD 98
>WB|WBGene00000442 [details] [associations]
symbol:ceh-19 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 EMBL:Z11794 EMBL:Z11795 EMBL:FO080909
PIR:S26301 PIR:T16113 RefSeq:NP_001023141.1 RefSeq:NP_001023142.1
ProteinModelPortal:P26797 SMR:P26797 EnsemblMetazoa:F20D12.6b
GeneID:177590 KEGG:cel:CELE_F20D12.6 UCSC:F20D12.6a CTD:177590
WormBase:F20D12.6a WormBase:F20D12.6b eggNOG:NOG279638
InParanoid:P26797 OMA:SARKHDY NextBio:897488 Uniprot:P26797
Length = 199
Score = 150 (57.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 36/91 (39%), Positives = 49/91 (53%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
RQ YS+ Q+ LE EF+ YL ++R LS+ L LTE QIK WFQNRR K K+ +
Sbjct: 98 RQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWKKQLTSSI 157
Query: 387 VEYVKESSEARSASQKTNHQSAPADTSAPNT 417
+ VK++ + S QS + P T
Sbjct: 158 RQMVKDAPTSTSVG--VPFQSLLTPPTPPTT 186
>WB|WBGene00045215 [details] [associations]
symbol:ceh-63 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 EMBL:FO080254 RefSeq:NP_001123094.1
UniGene:Cel.37684 ProteinModelPortal:A3FPJ2 SMR:A3FPJ2
EnsemblMetazoa:C02F12.10 GeneID:6418830 KEGG:cel:CELE_C02F12.10
UCSC:C02F12.10 CTD:6418830 WormBase:C02F12.10 eggNOG:NOG310362
HOGENOM:HOG000246442 InParanoid:A3FPJ2 OMA:ELTECQV NextBio:20901882
Uniprot:A3FPJ2
Length = 152
Score = 150 (57.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 42/142 (29%), Positives = 68/142 (47%)
Query: 304 PSSSHTYSNQIHKNLL----QCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKE 359
P S+ T S+Q KN+ + N R ++S Q+ LE EF Y+ DRR L++
Sbjct: 18 PWSNDTNSSQQIKNIKPPPKRSNRPTKRTTFTSEQVTLLELEFAKNEYICKDRRGELAQT 77
Query: 360 LGLTERQIKIWFQNRRMKLKRTHPDMVVEYVKESSEARSASQKTNHQSAPADTSAPNTHM 419
+ LTE Q+K WFQNRR K +R +S R + K + + +P+ + + H+
Sbjct: 78 IELTECQVKTWFQNRRTKKRRC-----------TSPLRKSMMKKSDERSPSPQNPSSQHV 126
Query: 420 KSFEEFIREHYERSAVPFPASQ 441
++ + F A P+ Q
Sbjct: 127 QNLQTFFHSWPSHFAYSLPSDQ 148
>WB|WBGene00000429 [details] [associations]
symbol:ceh-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06602
GeneTree:ENSGT00680000099625 EMBL:AY246428 EMBL:AY246429
EMBL:FO080101 PIR:E87793 PIR:S05703 RefSeq:NP_491746.1
UniGene:Cel.19042 ProteinModelPortal:G5ECT8 SMR:G5ECT8
EnsemblMetazoa:C27A12.5 GeneID:191615 KEGG:cel:CELE_C27A12.5
CTD:191615 WormBase:C27A12.5 OMA:VGNERKQ NextBio:949686
Uniprot:G5ECT8
Length = 209
Score = 146 (56.5 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R R +S+ Q+++LEK F +Y+ + RK L+ +L LTE Q+K+WFQNRR K KR
Sbjct: 128 RIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKVWFQNRRTKHKR 183
Score = 45 (20.9 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 227 KHEQPRKESSYKETENTQFNSETNDLSKLEEPNKTSSI 264
K R S KE+E E N+L KLEE + +
Sbjct: 4 KFSVERLVDSEKESEEADVE-EQNNLKKLEEDEEDDEL 40
>UNIPROTKB|E1C676 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:AADN02020025 EMBL:AADN02020026 EMBL:AADN02020027
EMBL:AADN02020028 EMBL:AADN02020029 EMBL:AADN02020030
IPI:IPI00581324 Ensembl:ENSGALT00000029909 OMA:PERTECA
ArrayExpress:E1C676 Uniprot:E1C676
Length = 307
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 244 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 299
>UNIPROTKB|J9PB70 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000049459 Uniprot:J9PB70
Length = 332
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 34/54 (62%), Positives = 39/54 (72%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
RQ YS +Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 268 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 321
>UNIPROTKB|F1RL72 [details] [associations]
symbol:LOC100626834 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 EMBL:FP102406 RefSeq:XP_003354410.1
Ensembl:ENSSSCT00000015792 GeneID:100626834 KEGG:ssc:100626834
OMA:RRTPYEM Uniprot:F1RL72
Length = 263
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 154 KYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 211
>UNIPROTKB|I3L684 [details] [associations]
symbol:LOC100626275 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 KO:K09312 OMA:YSHVEPG EMBL:CU914366
RefSeq:XP_003354406.1 Ensembl:ENSSSCT00000031753 GeneID:100626275
KEGG:ssc:100626275 Uniprot:I3L684
Length = 263
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 154 KYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 211
>WB|WBGene00003024 [details] [associations]
symbol:lin-39 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
"positive regulation of vulval development" evidence=IGI;IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
"plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
Uniprot:P34684
Length = 253
Score = 158 (60.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ +Q++ELEKEF YL RR ++ L LTERQ+KIWFQNRRMK K+ + D
Sbjct: 167 RQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKENKD 226
Score = 42 (19.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 12/44 (27%), Positives = 17/44 (38%)
Query: 3 PRAGVSPPGVSSEDSKTSPQNRKISPSKGVPSLLPMKDIRTSDP 46
PRA SS S +S + + G+PS + DP
Sbjct: 13 PRATAPESSSSSSSSSSSSSSTSSVGASGIPSSSELSSTIGYDP 56
>UNIPROTKB|P09078 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0045638 EMBL:X06668 ProteinModelPortal:P09078 SMR:P09078
Uniprot:P09078
Length = 93
Score = 149 (57.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Query: 328 QVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
Q S +Q +ELEKEF+ YL R +S LGLTERQIKIWFQNRRMK K+
Sbjct: 12 QTCSRYQTLELEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKK 64
>UNIPROTKB|E2RKQ8 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349
"bone morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 GO:GO:0060349 KO:K09312 CTD:1044 OMA:YSHVEPG
EMBL:AAEX03003101 RefSeq:XP_855089.1 Ensembl:ENSCAFT00000028928
GeneID:612256 KEGG:cfa:612256 NextBio:20897788 Uniprot:E2RKQ8
Length = 265
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 156 KYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 213
>UNIPROTKB|P47902 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0060349 "bone morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887 GO:GO:0000976
GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:U16360 EMBL:U15212 EMBL:U51095 EMBL:AF239666 EMBL:BC096251
IPI:IPI00790637 IPI:IPI00795021 PIR:I38868 PIR:I38881
RefSeq:NP_001795.2 UniGene:Hs.1545 ProteinModelPortal:P47902
SMR:P47902 MINT:MINT-6800278 STRING:P47902 PhosphoSite:P47902
DMDM:116241291 PRIDE:P47902 Ensembl:ENST00000231656 GeneID:1044
KEGG:hsa:1044 UCSC:uc003lrq.3 GeneCards:GC05P149526 HGNC:HGNC:1805
MIM:600746 neXtProt:NX_P47902 PharmGKB:PA26351 InParanoid:P47902
OMA:YSHVEPG PhylomeDB:P47902 GenomeRNAi:1044 NextBio:4377
ArrayExpress:P47902 Bgee:P47902 CleanEx:HS_CDX1
Genevestigator:P47902 GermOnline:ENSG00000113722 Uniprot:P47902
Length = 265
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 156 KYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 213
>UNIPROTKB|Q00056 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
Uniprot:Q00056
Length = 320
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/94 (42%), Positives = 52/94 (55%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ Q++ELEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 217 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK- 275
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTH 418
+ SS + SAS A T +P+ H
Sbjct: 276 -LPNTKMRSSNSASASAGP---PGKAQTQSPHLH 305
>UNIPROTKB|G3MXN5 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:DAAA02010938
UniGene:Bt.59423 NextBio:20877630 RefSeq:NP_001069602.2
Ensembl:ENSBTAT00000065144 GeneID:538865 KEGG:bta:538865
Uniprot:G3MXN5
Length = 319
Score = 164 (62.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/94 (42%), Positives = 52/94 (55%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ Q++ELEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 216 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK- 274
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTH 418
+ SS + SAS P T +P+ H
Sbjct: 275 -LPNTKMRSSNSGSAS--AGPPGKP-QTQSPHLH 304
Score = 43 (20.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 5 AGVSPPGVSSEDSKTSPQNRKISPSKGVPS 34
A SPPG+ ++ P +KI S PS
Sbjct: 179 ADKSPPGLKGKEPVVYPWMKKIHVSAVNPS 208
>MGI|MGI:88360 [details] [associations]
symbol:Cdx1 "caudal type homeobox 1" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:88360 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000976
GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
OMA:YSHVEPG EMBL:M37163 EMBL:M80463 EMBL:BC019986 IPI:IPI00109616
PIR:A49303 RefSeq:NP_034010.3 UniGene:Mm.144448
ProteinModelPortal:P18111 SMR:P18111 STRING:P18111
PhosphoSite:P18111 PRIDE:P18111 Ensembl:ENSMUST00000025521
GeneID:12590 KEGG:mmu:12590 UCSC:uc008fbj.2 InParanoid:P18111
NextBio:281734 Bgee:P18111 CleanEx:MM_CDX1 Genevestigator:P18111
GermOnline:ENSMUSG00000024619 Uniprot:P18111
Length = 268
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTH 382
++R VY+ HQ +ELEKEF + Y+ R+ L+ LGLTERQ+KIWFQNRR K ++ +
Sbjct: 156 KYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVN 213
>UNIPROTKB|K7GKV4 [details] [associations]
symbol:LOC100623433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 EMBL:FP245529 RefSeq:XP_003360417.1
Ensembl:ENSSSCT00000034899 GeneID:100623433 Uniprot:K7GKV4
Length = 284
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 35/93 (37%), Positives = 55/93 (59%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
++R VY+ HQ +ELEKEF Y+ R+ L+ LGL+ERQ+KIWFQNRR K ++
Sbjct: 175 KYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERK---- 230
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNT 417
M+ + + + + + Q + +P + PNT
Sbjct: 231 MIKKKISQFENSGGSVQSDSGSISPGEL--PNT 261
>UNIPROTKB|E1B7T2 [details] [associations]
symbol:LOC100848736 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:DAAA02010938 IPI:IPI00708268
Ensembl:ENSBTAT00000033679 Uniprot:E1B7T2
Length = 249
Score = 162 (62.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+ +
Sbjct: 157 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK- 215
Query: 385 MVVEYVKESSEARSASQKT 403
++ + S E A KT
Sbjct: 216 -LINSTQPSGE--DAEAKT 231
>UNIPROTKB|I3L5H5 [details] [associations]
symbol:LOC100623433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ EMBL:FP245529
Ensembl:ENSSSCT00000030959 Uniprot:I3L5H5
Length = 286
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 35/93 (37%), Positives = 55/93 (59%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
++R VY+ HQ +ELEKEF Y+ R+ L+ LGL+ERQ+KIWFQNRR K ++
Sbjct: 177 KYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERK---- 232
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNT 417
M+ + + + + + Q + +P + PNT
Sbjct: 233 MIKKKISQFENSGGSVQSDSGSISPGEL--PNT 263
>UNIPROTKB|E1BRT6 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104054 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 IPI:IPI00820869
Ensembl:ENSGALT00000038688 ArrayExpress:E1BRT6 Uniprot:E1BRT6
Length = 329
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ YS Q +ELEKEF YL RR +S LGLTERQ+KIWFQNRRMK K+
Sbjct: 268 RGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 323
>UNIPROTKB|F1SHT2 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 OMA:PPGKPQT EMBL:CU570959
RefSeq:XP_003134889.1 UniGene:Ssc.38326 Ensembl:ENSSSCT00000018185
GeneID:100519635 KEGG:ssc:100519635 Uniprot:F1SHT2
Length = 329
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 40/94 (42%), Positives = 52/94 (55%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPD 384
R R Y+ Q++ELEKEF YL RR ++ L L+ERQ+KIWFQNRRMK K+ H
Sbjct: 224 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK- 282
Query: 385 MVVEYVKESSEARSASQKTNHQSAPADTSAPNTH 418
+ K S + SAS P T +P+ H
Sbjct: 283 --LPNTKMRS-SNSASASAGPPGKP-QTQSPHPH 312
>UNIPROTKB|E2RDA2 [details] [associations]
symbol:MNX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060539
"diaphragm development" evidence=IEA] [GO:0031018 "endocrine
pancreas development" evidence=IEA] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0008045 GO:GO:0009791 GO:GO:0021675
GO:GO:0031018 GO:GO:0060539 GO:GO:0021904
GeneTree:ENSGT00660000095141 GO:GO:0021520 EMBL:AAEX03010324
EMBL:AAEX03010325 Ensembl:ENSCAFT00000008288 OMA:YNSSDCS
Uniprot:E2RDA2
Length = 323
Score = 163 (62.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 37/83 (44%), Positives = 51/83 (61%)
Query: 299 IPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSK 358
+PK P +S SN + K C R R ++S Q++ELE +F+L YL +R ++
Sbjct: 142 LPKMPDFTSQAQSNLLGK----CR--RPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVAT 195
Query: 359 ELGLTERQIKIWFQNRRMKLKRT 381
L LTE Q+KIWFQNRRMK KR+
Sbjct: 196 SLMLTETQVKIWFQNRRMKWKRS 218
Score = 44 (20.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 13/55 (23%), Positives = 19/55 (34%)
Query: 5 AGVSPPGVSSEDSKTSPQNRKISPSKGVPSLLPMKDIRTSDPDWPRPTASFAATI 59
AG G + + + SP P P + T P PR A+ A +
Sbjct: 42 AGGGGGGGGASGGASGGASGSCSPESSEPPAAPADRLHTESPSPPRLLAAHCALL 96
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 133 (51.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 30/89 (33%), Positives = 51/89 (57%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR--TH 382
R R V++ Q+ +LE+ F + YL R L++ LGL++ Q+K+WFQNRR K K+ +
Sbjct: 37 RPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQKKIDSR 96
Query: 383 PDMVVEYVKESSEARSASQK-TNHQSAPA 410
+ E +K + ++ Q N+ +A A
Sbjct: 97 DPIKPETLKPAENYQNVYQNYQNYWTAAA 125
Score = 37 (18.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 289 DIPSNLDLSQIPKPP 303
+IP+ LDL + PK P
Sbjct: 25 EIPAKLDLER-PKRP 38
>UNIPROTKB|F1NVN6 [details] [associations]
symbol:MNR2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:AADN02016763 IPI:IPI00586200
Ensembl:ENSGALT00000018518 OMA:MAVEPEK Uniprot:F1NVN6
Length = 158
Score = 148 (57.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRT 381
R R ++S Q++ELE +F+L YL +R ++ L LTE Q+KIWFQNRRMK KR+
Sbjct: 13 RPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 69
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 148 (57.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 289 DIPS-NLDLSQIPKPPPSSSHTYSNQIHKNLLQCNTGRFRQVYSSHQIVELEKEFRLTNY 347
D+P+ N ++ + + S + I K + + R +S Q+ ELEK+F Y
Sbjct: 36 DLPTVNGEIDEFGRCKSSLDQAKESPIEK-CQKTKRKKARTTFSGKQVFELEKQFEAKKY 94
Query: 348 LPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
L S R L+K L +TE Q+KIWFQNRR K K+
Sbjct: 95 LSSSDRSELAKRLDVTETQVKIWFQNRRTKWKK 127
>RGD|6491746 [details] [associations]
symbol:LOC100911668 "homeobox protein Hox-A10-like"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:6491746 RGD:6501881 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326 GO:GO:0001501
GO:GO:0009954 KO:K09295 GeneTree:ENSGT00700000104054
OrthoDB:EOG4VX26S EMBL:AC122669 IPI:IPI00914215
RefSeq:XP_003749805.1 RefSeq:XP_003752230.1
Ensembl:ENSRNOT00000036394 GeneID:100909714 GeneID:100911668
KEGG:rno:100909714 KEGG:rno:100911668 Uniprot:D3ZHM5
Length = 413
Score = 172 (65.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 332 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 376 MKLKR 380
MKLK+
Sbjct: 392 MKLKK 396
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 14 SEDSKTSPQNRKISPSK 30
SE+SK SP+ + SK
Sbjct: 310 SENSKASPEKDSLGNSK 326
>RGD|6501881 [details] [associations]
symbol:LOC100909714 "homeobox protein Hox-A10-like"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:6491746 RGD:6501881 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326 GO:GO:0001501
GO:GO:0009954 KO:K09295 GeneTree:ENSGT00700000104054
OrthoDB:EOG4VX26S EMBL:AC122669 IPI:IPI00914215
RefSeq:XP_003749805.1 RefSeq:XP_003752230.1
Ensembl:ENSRNOT00000036394 GeneID:100909714 GeneID:100911668
KEGG:rno:100909714 KEGG:rno:100911668 Uniprot:D3ZHM5
Length = 413
Score = 172 (65.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 317 NLLQCNTGRFRQV-YSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRR 375
N L +GR ++ Y+ HQ +ELEKEF YL +RR +S+ + LT+RQ+KIWFQNRR
Sbjct: 332 NWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 376 MKLKR 380
MKLK+
Sbjct: 392 MKLKK 396
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 14 SEDSKTSPQNRKISPSK 30
SE+SK SP+ + SK
Sbjct: 310 SENSKASPEKDSLGNSK 326
>UNIPROTKB|F6UVZ9 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 OMA:AEGSCAF
GeneTree:ENSGT00700000104332 Ensembl:ENSCAFT00000026682
EMBL:AAEX03006516 Uniprot:F6UVZ9
Length = 232
Score = 159 (61.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
R RQ Y+ +Q +ELEKEF YL RR ++ L LTERQIKIWFQNRRMK K+
Sbjct: 148 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 203
>RGD|620609 [details] [associations]
symbol:Hoxa5 "homeo box A5" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 159 (61.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 287 EKDIPSNLDLSQI---PKP-PPSSSHTYSNQIHKNLLQCNTG-----RFRQVYSSHQIVE 337
E+D P++ + + P P PP+ Y ++ N G R R Y+ +Q +E
Sbjct: 129 EEDAPASSEQAGAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTCYTRYQTLE 188
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 189 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 231
>UNIPROTKB|P52949 [details] [associations]
symbol:Hoxa5 "Homeobox protein Hox-A5" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 159 (61.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 287 EKDIPSNLDLSQI---PKP-PPSSSHTYSNQIHKNLLQCNTG-----RFRQVYSSHQIVE 337
E+D P++ + + P P PP+ Y ++ N G R R Y+ +Q +E
Sbjct: 129 EEDAPASSEQAGAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTCYTRYQTLE 188
Query: 338 LEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKR 380
LEKEF YL RR ++ L L+ERQIKIWFQNRRMK K+
Sbjct: 189 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 231
>UNIPROTKB|A2VDN3 [details] [associations]
symbol:DLX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568 GO:GO:0000976
GeneTree:ENSGT00700000104439 HOVERGEN:HBG005493
HOGENOM:HOG000231940 InterPro:IPR022135 Pfam:PF12413 KO:K09315
CTD:1747 eggNOG:NOG299102 OrthoDB:EOG42Z4QW EMBL:DAAA02049043
EMBL:BC133325 IPI:IPI00695182 RefSeq:NP_001075091.1
UniGene:Bt.23480 SMR:A2VDN3 STRING:A2VDN3
Ensembl:ENSBTAT00000023142 GeneID:784366 KEGG:bta:784366
InParanoid:A2VDN3 NextBio:20926651 Uniprot:A2VDN3
Length = 287
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
R +YSS+Q+ L++ F+ YL R L+ +LGLT+ Q+KIWFQNRR K K+ + +
Sbjct: 133 RTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGE 192
Query: 387 VEYVKESSEARSASQKTNHQSAPA--DTSAPNT 417
V E S S S N +PA DTS+ +T
Sbjct: 193 VPL--EHSPNNSDSMACNSPPSPALWDTSSHST 223
>UNIPROTKB|E2RRW2 [details] [associations]
symbol:DLX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0001568 "blood vessel
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568 GO:GO:0000976
GeneTree:ENSGT00700000104439 InterPro:IPR022135 Pfam:PF12413
KO:K09315 CTD:1747 OMA:SWYHTQN EMBL:AAEX03006532 RefSeq:XP_548193.2
ProteinModelPortal:E2RRW2 Ensembl:ENSCAFT00000026875 GeneID:491073
KEGG:cfa:491073 NextBio:20863968 Uniprot:E2RRW2
Length = 287
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
R +YSS+Q+ L++ F+ YL R L+ +LGLT+ Q+KIWFQNRR K K+ + +
Sbjct: 133 RTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGE 192
Query: 387 VEYVKESSEARSASQKTNHQSAPA--DTSAPNT 417
V E S S S N +PA DTS+ +T
Sbjct: 193 VPL--EHSPNNSDSMACNSPPSPALWDTSSHST 223
>UNIPROTKB|O60479 [details] [associations]
symbol:DLX3 "Homeobox protein DLX-3" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0001890 "placenta development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:CH471109 GO:GO:0001890 GO:GO:0001568
GO:GO:0000976 HOVERGEN:HBG005493 HOGENOM:HOG000231940
InterPro:IPR022135 Pfam:PF12413 KO:K09315 EMBL:AF028233
EMBL:AF452638 EMBL:AK075167 EMBL:BC012361 EMBL:BC028970
IPI:IPI00029716 RefSeq:NP_005211.1 UniGene:Hs.134194
ProteinModelPortal:O60479 SMR:O60479 IntAct:O60479 STRING:O60479
PhosphoSite:O60479 PRIDE:O60479 DNASU:1747 Ensembl:ENST00000434704
GeneID:1747 KEGG:hsa:1747 UCSC:uc002ipy.3 CTD:1747
GeneCards:GC17M048067 HGNC:HGNC:2916 HPA:HPA031164 MIM:104510
MIM:190320 MIM:600525 neXtProt:NX_O60479 Orphanet:100034
Orphanet:3352 PharmGKB:PA27371 eggNOG:NOG299102 InParanoid:O60479
OMA:SWYHTQN OrthoDB:EOG42Z4QW PhylomeDB:O60479 GenomeRNAi:1747
NextBio:7087 ArrayExpress:O60479 Bgee:O60479 CleanEx:HS_DLX3
Genevestigator:O60479 GermOnline:ENSG00000064195 Uniprot:O60479
Length = 287
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
R +YSS+Q+ L++ F+ YL R L+ +LGLT+ Q+KIWFQNRR K K+ + +
Sbjct: 133 RTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGE 192
Query: 387 VEYVKESSEARSASQKTNHQSAPA--DTSAPNT 417
V E S S S N +PA DTS+ +T
Sbjct: 193 VPL--EHSPNNSDSMACNSPPSPALWDTSSHST 223
>MGI|MGI:94903 [details] [associations]
symbol:Dlx3 "distal-less homeobox 3" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0001568 "blood
vessel development" evidence=IMP] [GO:0001890 "placenta
development" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0071895 "odontoblast differentiation"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:94903
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568
GO:GO:0000976 HOVERGEN:HBG005493 HOGENOM:HOG000231940
InterPro:IPR022135 Pfam:PF12413 KO:K09315 CTD:1747 eggNOG:NOG299102
OMA:SWYHTQN OrthoDB:EOG42Z4QW EMBL:S81932 EMBL:BC058852
IPI:IPI00132068 RefSeq:NP_034185.1 UniGene:Mm.5194
ProteinModelPortal:Q64205 SMR:Q64205 STRING:Q64205
PhosphoSite:Q64205 PRIDE:Q64205 Ensembl:ENSMUST00000092768
GeneID:13393 KEGG:mmu:13393 InParanoid:Q64205 NextBio:283764
Bgee:Q64205 CleanEx:MM_DLX3 Genevestigator:Q64205
GermOnline:ENSMUSG00000001510 Uniprot:Q64205
Length = 287
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
R +YSS+Q+ L++ F+ YL R L+ +LGLT+ Q+KIWFQNRR K K+ + +
Sbjct: 133 RTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGE 192
Query: 387 VEYVKESSEARSASQKTNHQSAPA--DTSAPNT 417
V E S S S N +PA DTS+ +T
Sbjct: 193 VPL--EHSPNNSDSMACNSPPSPALWDTSSHST 223
>RGD|1304875 [details] [associations]
symbol:Dlx3 "distal-less homeobox 3" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001568 "blood
vessel development" evidence=IEA;ISO] [GO:0001890 "placenta
development" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=ISO] [GO:0071895 "odontoblast differentiation"
evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1304875
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568
GO:GO:0000976 EMBL:CH473948 GeneTree:ENSGT00700000104439
InterPro:IPR022135 Pfam:PF12413 KO:K09315 CTD:1747 OMA:SWYHTQN
OrthoDB:EOG42Z4QW IPI:IPI00208070 RefSeq:NP_001099302.1
UniGene:Rn.104800 Ensembl:ENSRNOT00000005797 GeneID:287638
KEGG:rno:287638 UCSC:RGD:1304875 NextBio:626687 Uniprot:D4ADD0
Length = 287
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 327 RQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHPDMV 386
R +YSS+Q+ L++ F+ YL R L+ +LGLT+ Q+KIWFQNRR K K+ + +
Sbjct: 133 RTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGE 192
Query: 387 VEYVKESSEARSASQKTNHQSAPA--DTSAPNT 417
V E S S S N +PA DTS+ +T
Sbjct: 193 VPL--EHSPNNSDSMACNSPPSPALWDTSSHST 223
>UNIPROTKB|F1NZL9 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00660000095141 OMA:RRIRMRR
EMBL:AADN02056979 EMBL:AADN02056980 IPI:IPI00821562
Ensembl:ENSGALT00000038656 Uniprot:F1NZL9
Length = 78
Score = 147 (56.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 30/59 (50%), Positives = 37/59 (62%)
Query: 325 RFRQVYSSHQIVELEKEFRLTNYLPSDRRKVLSKELGLTERQIKIWFQNRRMKLKRTHP 383
R R ++ Q+V LE +FR T YL R L+ L LTE Q+KIWFQNRR K K+ HP
Sbjct: 17 RARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQHP 75
WARNING: HSPs involving 1044 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 575 532 0.00092 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1294
No. of states in DFA: 614 (65 KB)
Total size of DFA: 297 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.91u 0.15s 70.06t Elapsed: 00:00:05
Total cpu time: 69.93u 0.15s 70.08t Elapsed: 00:00:05
Start: Thu Aug 15 11:17:11 2013 End: Thu Aug 15 11:17:16 2013
WARNINGS ISSUED: 2